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Sample records for aligned c-axis oriented

  1. Thickness-controlled synthesis of vertically aligned c-axis oriented ZnO nanorod arrays: Effect of growth time via novel dual sonication sol-gel process

    NASA Astrophysics Data System (ADS)

    Firdaus Malek, Mohd; Hafiz Mamat, Mohamad; Soga, Tetsuo; Rahman, Saadah Abdul; Abu Bakar, Suriani; Syakirin Ismail, Ahmad; Mohamed, Ruziana; Alrokayan, Salman A. H.; Khan, Haseeb A.; Rusop Mahmood, Mohamad

    2016-01-01

    Zinc-oxide (ZnO) nanorod arrays were successfully prepared by using dual sonication sol-gel process. Field emission scanning electron microscopy revealed that the nanorods exhibited a hexagonal structure with a flat-end facet. The nanorods displayed similar surface morphologies and grew uniformly on the seed layer substrate, with the average diameter slightly increasing to the range of 65 to 80 nm after being immersed for varying growth times. Interestingly, thickness measurements indicated that the thicknesses of the samples increased as the growth time was extended. In addition, the X-ray diffraction spectra indicated that the prepared ZnO nanorods with a hexagonal wurtzite structure grew preferentially along the c-axis. Therefore, we can conclude that the diameter, length, and orientation of the ZnO nanorod arrays along the c-axis are controllable by adjusting the growth time, motivating us to further explore the growth mechanisms of ZnO nanorods.

  2. Characterization of reactively sputtered c-axis aligned nanocrystalline InGaZnO{sub 4}

    SciTech Connect

    Lynch, David M.; Zhu, Bin; Ast, Dieter G.; Thompson, Michael O.; Levin, Barnaby D. A.; Muller, David A.; Greene, Raymond G.

    2014-12-29

    Crystallinity and texturing of RF sputtered c-axis aligned crystal InGaZnO{sub 4} (CAAC IGZO) thin films were quantified using X-ray diffraction techniques. Above 190 °C, nanocrystalline films with an X-ray peak at 2θ = 30° (009 planes) developed with increasing c-axis normal texturing up to 310 °C. Under optimal conditions (310 °C, 10% O{sub 2}), films exhibited a c-axis texture full-width half-maximum of 20°. Cross-sectional high-resolution transmission electron microscopy confirmed these results, showing alignment variation of ±9° over a 15 × 15 nm field of view and indicating formation of much larger aligned domains than previously reported. At higher deposition temperatures, c-axis alignment was gradually lost as polycrystalline films developed.

  3. Chemical solution deposition of the highly c-axis oriented apatite type lanthanum silicate thin films.

    PubMed

    Hori, Shigeo; Takatani, Yasuhiro; Kadoura, Hiroaki; Uyama, Takeshi; Fujita, Satoru; Tani, Toshihiko

    2015-10-28

    Highly c-axis oriented apatite-type lanthanum silicate (LSO) thin films were fabricated by a simple solution coating method. In the solution coating method, LSO thin films are obtained by crystallization of initially deposited amorphous LSO precursor thin films. The degree of orientation was influenced by the precursor morphologies and a dense LSO precursor led to a high c-axis orientation perpendicular to the substrate. The oriented LSO thin films were composed of columnar grains with a single crystal orientation over the entire film thickness. In-plane orientation was not detected, which indicates that the c-axis orientation of the LSO thin films can be attributed to self-orientation. PMID:26391101

  4. Synthesis of c-axis oriented AlN thin films on different substrates: A review

    SciTech Connect

    Iriarte, G.F.

    2010-09-15

    Highly c-axis oriented AlN thin films have been deposited by reactive sputtering on different substrates. The crystallographic properties of layered film structures consisting of a piezoelectric layer, aluminum nitride (AlN), synthesized on a variety of substrates, have been examined. Aluminum nitride thin films have been deposited by reactive pulsed-DC magnetron sputtering using an aluminum target in an Ar/N{sub 2} gas mixture. The influence of the most critical deposition parameters on the AlN thin film crystallography has been investigated by means of X-ray diffraction (XRD) analysis of the rocking curve Full-Width at Half Maximum (FWHM) of the AlN-(0 0 0 2) peak. The relationship between the substrate, the synthesis parameters and the crystallographic orientation of the AlN thin films is discussed. A guide is provided showing how to optimize these conditions to obtain highly c-axis oriented AlN thin films on substrates of different nature.

  5. High mobility, dual layer, c-axis aligned crystalline/amorphous IGZO thin film transistor

    NASA Astrophysics Data System (ADS)

    Chung, Chen-Yang; Zhu, Bin; Greene, Raymond G.; Thompson, Michael O.; Ast, Dieter G.

    2015-11-01

    We demonstrate a dual layer IGZO thin film transistor (TFT) consisting of a 310 °C deposited c-axis aligned crystal (CAAC) 20 nm thick channel layer capped by a second, 30 nm thick, 260 °C deposited amorphous IGZO layer. The TFT exhibits a saturation field-effect mobility of ˜20 cm2/V s, exceeding the mobility of 50 nm thick single layer reference TFTs fabricated with either material. The deposition temperature of the second layer influences the mobility of the underlying transport layer. When the cap layer is deposited at room temperature (RT), the mobility in the 310 °C deposited CAAC layer is initially low (6.7 cm2/V s), but rises continuously with time over 58 days to 20.5 cm2/V s, i.e., to the same value as when the second layer is deposited at 260 °C. This observation indicates that the two layers equilibrate at RT with a time constant on the order of 5 × 106 s. An analysis based on diffusive transport indicates that the room temperature diffusivity must be of the order of 1 × 10-18 cm2 s-1 with an activation enthalpy EA < 0.2 eV for the mobility limiting species. The findings are consistent with a hypothesis that the amorphous layer deposited on top of the CAAC has a higher solubility for impurities and/or structural defects than the underlying nanocrystalline transport layer, and that the equilibration of the mobility limiting species is rate limited by hydrogen diffusion, whose known diffusivity fits these estimates.

  6. The role of the crystal orientation (c-axis) on switching field distribution and the magnetic domain configuration in electrodeposited hcp Co–Pt nanowires

    NASA Astrophysics Data System (ADS)

    Shahid Arshad, Muhammad; Proenca, Mariana P.; Trafela, Spela; Neu, Volker; Wolff, Ulrike; Stienen, Sven; Vazquez, Manuel; Kobe, Spomenka; Žužek Rožman, Kristina

    2016-05-01

    In this report, Co–Pt nanowires (NWs) were produced via potentiostatic electrodeposition into commonly used commercial ordered-alumina and disordered-polycarbonate membranes with similar pore diameters (≈200 nm). The pore diameter of the membranes and the deposition conditions were chosen such that the Co–Pt NWs fabricated into both membranes had a hexagonal close packed (hcp) crystal structure with a crystallographic texturing of the c-axis in the direction perpendicular to the NWs’ long axis; this effect was more pronounced in the alumina membranes. Due to the local fluctuation in electrodeposition conditions (pore diameter, pore shape), we have found a small variation in the c-axis orientations in the plane perpendicular to the NWs’ long axis. Magnetic characterizations suggested that there is uniaxial anisotropy perpendicular to the Co–Pt NWs’ long axis and the small variation in the orientation of the hcp c-axis plays an important role in the switching-field distribution and the magnetic domain structure of the Co–Pt NWs. First order reversal curves (FORCs) revealed week magnetostatic interactions between Co–Pt NWs, thus suggesting that the different pore alignments are not influencing much the magnetic properties in both membranes. The micromagnetic simulation revealed that the transverse-stripe (TS) and longitudinal stripe (LS) domains are energetically most favorable structures in such NWs. This study accentuates the influence of the crystal orientation (c-axis) of the high-anisotropy materials on their functional magnetic properties and thus is of great importance for the fabrication of nanodevices based on such NWs.

  7. Orientation and Alignment Echoes

    NASA Astrophysics Data System (ADS)

    Karras, G.; Hertz, E.; Billard, F.; Lavorel, B.; Hartmann, J.-M.; Faucher, O.; Gershnabel, Erez; Prior, Yehiam; Averbukh, Ilya Sh.

    2015-04-01

    We present one of the simplest classical systems featuring the echo phenomenon—a collection of randomly oriented free rotors with dispersed rotational velocities. Following excitation by a pair of time-delayed impulsive kicks, the mean orientation or alignment of the ensemble exhibits multiple echoes and fractional echoes. We elucidate the mechanism of the echo formation by the kick-induced filamentation of phase space, and provide the first experimental demonstration of classical alignment echoes in a thermal gas of CO2 molecules excited by a pair of femtosecond laser pulses.

  8. Morphology and composition controlled growth of polar c-axis and nonpolar m-axis well-aligned ternary III-nitride nanotube arrays.

    PubMed

    Li, Huijie; Zhao, Guijuan; Kong, Susu; Han, Dongyue; Wei, Hongyuan; Wang, Lianshan; Chen, Zhen; Yang, Shaoyan

    2015-10-21

    Control over the nanostructure morphology and growth orientation is in high demand for fundamental research and technological applications. Herein we report a general strategy to fabricate polar c-axis and nonpolar m-axis well-aligned III-nitride ternary nanotube arrays with controllable morphologies and compositions. By depositing AlN on the InN nanorod array templates and thermally removing the InN templates, InAlN nanotubes can be obtained. Polar c-axis and nonpolar m-axis nanotubes were formed on the c- and r-plane sapphire substrates, respectively. The nanotubes are single crystalline and highly ordered on the substrates, as revealed by X-ray diffraction, electron microscopy, and selected area electron microscopy characterization. It was found that the In droplets on top of the InN nanorods play a critical role in controlling the morphology of the nanotubes. By keeping or removing the In droplets, the obtained nanotubes exhibited both ends open or only one end open. And by varying the AlN deposition temperature, the In composition in the nanotubes can be changed from 0 to 0.29. The nanotube synthesis method is simple and can be applied to the formation of other III-nitride ternary (InGaN, and AlGaN) or quaternary (InAlGaN) alloy nanotube arrays. PMID:26395389

  9. In vitro dissolution and mechanical behavior of c-axis preferentially oriented hydroxyapatite thin films fabricated by pulsed laser deposition

    PubMed Central

    Kim, Hyunbin; Camata, Renato P.; Chowdhury, Shafiul; Vohra, Yogesh K.

    2010-01-01

    Owing to its resemblance to the major inorganic constituent of bone and tooth, hydroxyapatite is recognized as one of the most biocompatible materials and is widely used in systems for bone replacement and regeneration. In this study the pulsed laser deposition technique was chosen to produce hydroxyapatite with different crystallographic orientations in order to investigate some of the material properties, including its in vitro dissolution behavior, as well as mechanical properties. The crystallographic orientations of hydroxyapatite coatings can be carefully controlled, mainly by varying the energy density of the KrF excimer laser (248 nm) used for deposition. Nanoindentation results showed that highly c-axis oriented hydroxyapatite coatings have higher hardness and Young's modulus values compared with the values of randomly oriented coatings. After 24 h immersion in simulated physiological solution the overall surface morphology of the highly oriented coatings was dramatically altered. The porosity was drastically increased and sub-micron pores were formed throughout the coatings, whereas the average size of the grains in the coatings was not significantly changed. The composition of the textured hydroxyapatite coatings remained essentially unchanged. Their c-axis texture, on the other hand, was rather enhanced with an increase in immersion time. The c-axis oriented hydroxyapatite surfaces are likely to promote preferentially oriented growth through a cyclic process of dissolution and reprecipitation, followed by homoepitaxial growth. The remarkable morphological and microstructural changes after dissolution suggest a capability of highly textured hydroxyapatite as a tissue engineering scaffold with an interconnecting porous network that may be beneficial for cellular activity. PMID:20188868

  10. Morphology and composition controlled growth of polar c-axis and nonpolar m-axis well-aligned ternary III-nitride nanotube arrays

    NASA Astrophysics Data System (ADS)

    Li, Huijie; Zhao, Guijuan; Kong, Susu; Han, Dongyue; Wei, Hongyuan; Wang, Lianshan; Chen, Zhen; Yang, Shaoyan

    2015-10-01

    Control over the nanostructure morphology and growth orientation is in high demand for fundamental research and technological applications. Herein we report a general strategy to fabricate polar c-axis and nonpolar m-axis well-aligned III-nitride ternary nanotube arrays with controllable morphologies and compositions. By depositing AlN on the InN nanorod array templates and thermally removing the InN templates, InAlN nanotubes can be obtained. Polar c-axis and nonpolar m-axis nanotubes were formed on the c- and r-plane sapphire substrates, respectively. The nanotubes are single crystalline and highly ordered on the substrates, as revealed by X-ray diffraction, electron microscopy, and selected area electron microscopy characterization. It was found that the In droplets on top of the InN nanorods play a critical role in controlling the morphology of the nanotubes. By keeping or removing the In droplets, the obtained nanotubes exhibited both ends open or only one end open. And by varying the AlN deposition temperature, the In composition in the nanotubes can be changed from 0 to 0.29. The nanotube synthesis method is simple and can be applied to the formation of other III-nitride ternary (InGaN, and AlGaN) or quaternary (InAlGaN) alloy nanotube arrays.Control over the nanostructure morphology and growth orientation is in high demand for fundamental research and technological applications. Herein we report a general strategy to fabricate polar c-axis and nonpolar m-axis well-aligned III-nitride ternary nanotube arrays with controllable morphologies and compositions. By depositing AlN on the InN nanorod array templates and thermally removing the InN templates, InAlN nanotubes can be obtained. Polar c-axis and nonpolar m-axis nanotubes were formed on the c- and r-plane sapphire substrates, respectively. The nanotubes are single crystalline and highly ordered on the substrates, as revealed by X-ray diffraction, electron microscopy, and selected area electron microscopy

  11. Fabrication and Characterization of p-Type SnO Thin Film with High c-Axis Preferred Orientation

    NASA Astrophysics Data System (ADS)

    Pei, Yanli; Liu, Wuguang; Shi, Jingtao; Chen, Zimin; Wang, Gang

    2016-08-01

    p-Type tin monoxide (SnO) thin films with high c-axis preferred orientation have been fabricated on quartz substrate via electron-beam evaporation at 280°C. Subsequently, rapid thermal annealing (RTA) was performed in N2 atmosphere at 400°C to 800°C. Their structural, chemical, optical, and electrical properties were investigated by x-ray diffraction analysis, ultraviolet-visible spectroscopy, scanning electron microscopy, x-ray photoelectron spectroscopy, and Hall-effect measurements. The c-axis-oriented films of Sn-rich SnO presented excellent thermal stability up to RTA at 700°C. Both the crystallization and the hole Hall mobility were enhanced with increasing RTA temperature, with Hall mobility of 16 cm2 V-1 s-1 being obtained after RTA at 700°C. It was considered that the presence of defects and low scattering from grain boundaries contributed to this high Hall mobility. RTA annealing temperature above 700°C induced chemical reaction between SnO and the quartz substrate, with a change of the film to amorphous state with Sn4+ formation.

  12. Synthesis and characterization of self-assembled c-axis oriented Bi2Sr3Co2O(y) thin films by the sol-gel method.

    PubMed

    Zhu, Xuebin; Tang, Xianwu; Shi, Dongqi; Jian, Hongbin; Lei, Hechang; Yeoh, Wai Kong; Zhao, Bangchuan; Yang, Jie; Li, Qi; Zheng, Rongkun; Dou, Shixue; Sun, Yuping

    2011-10-01

    Bi(2)Sr(3)Co(2)O(y) thin films are prepared on SrTiO(3) (100), (110) and (111) single crystal substrates using the sol-gel method. All the thin films are c-axis oriented regardless of the orientation of the substrate suggesting self-assembled c-axis orientation, and X-ray photoelectron spectroscopy results give evidence of coexistence of Co(3+) and Co(2+) ions in the derived films. Transmission electronic microscopy observations reveal that all samples are c-axis oriented with no obvious differences for different samples, and the c-axis lattice constant is determined as ~15 Å suggesting the misfit structure. A phenomenological thermodynamic phase diagram for self-assembled c-axis orientation is established for misfit cobaltate-based films using chemical solution deposition. All samples behave like semiconductors due to the coexistence of Co(3+)/Co(2+) ions, and the resistivity at 350 K is ~47, 39 and 17 mΩ cm for the thin films on SrTiO(3) (100), (110) and (111), respectively, whereas the Seebeck coefficient at 300 K is 97, 89 and 77 μV K(-1). The successful attainment of Bi(2)Sr(3)Co(2)O(y) thin films with self-assembled c-axis orientation will provide an effective prototype for investigation of growth mechanisms in complex oxide thin films with a misfit structure. PMID:21850346

  13. c-axis orientation and piezoelectric coefficients of AlN thin films sputter-deposited on titanium bottom electrodes

    NASA Astrophysics Data System (ADS)

    Ababneh, A.; Alsumady, M.; Seidel, H.; Manzaneque, T.; Hernando-García, J.; Sánchez-Rojas, J. L.; Bittner, A.; Schmid, U.

    2012-10-01

    Aluminum nitride (AlN) reactively sputter deposited from an aluminum target is an interesting compound material due to its CMOS compatible fabrication process and its piezoelectric properties. To obtain high piezoelectric coefficients it is a necessary pre-request to synthesize films with c-axis orientation. Besides the influence of sputter conditions on the microstructure of AlN thin films the condition of the substrate surface is another important factor of utmost importance. In this study, the influence of 350 nm thick titanium metallization DC sputter-deposited on SiO2/Si substrates at varying back pressure levels bp,Ti in the range of 2 × 10-3 to 14 × 10-3 mbar on the c-axis orientation and the piezoelectric coefficients of 600 nm thick AlN thin films is investigated. Besides the plasma power for Ti deposition (Pp,Ti = 100 W) the parameters for AlN synthetization are fixed to Pp = 1000 W and bp,AlN = 4 × 10-3 mbar in 100% N2 atmosphere. Basically, the surface roughness of the Ti bottom layer is the dominating factor resulting either in a high degree of c-axis orientation (i.e. at low bp,Ti values) or in an amorphous AlN microstructure (i.e. at high bp,Ti values). Under low pressure conditions, a smooth and dense surface characteristics is achieved due to a higher kinetic energy associated with the adatoms what is especially important at nominally unheated substrate conditions. The piezoelectric coefficient d33 decreases from 2.55 to 1.7 pm -1 when increasing the titanium sputter pressure from 2 × 10-3 to 14 × 10-3 mbar. When decreasing the Ti film thickness to 60 nm and hence, reducing the root mean square roughness by a factor of about 2, the intensity associated with the AlN (0 0 2) peak is increased by a factor of about 1.7 demonstrating the direct impact. Furthermore, the highest values for d33 and d31 (i.e. 3.15 pm V-1 and -1.28 pm V-1) are determined.

  14. Preparation of the c-axis oriented AlN film by laser chemical vapor deposition using a newly proposed Al(acac)3 precursor

    NASA Astrophysics Data System (ADS)

    You, Yu; Ito, Akihiko; Tu, Rong; Goto, Takashi

    2013-02-01

    Highly oriented AlN film was prepared on a c-plane sapphire substrate by laser chemical vapor deposition using a newly proposed aluminum acetylacetonate precursor and ammonia gas as source reactants. The c-axis oriented AlN films were obtained on the c-plane sapphire substrate at deposition temperatures from 900 to 1230 K. AlN film prepared at 1047 K showed an epitaxial relation as (//( [//[. The full width at half maximum (FWHM) of the X-ray rocking curve for AlN (0002) plane increased with increasing deposition temperature. The c-axis lattice parameter decreased with increasing deposition temperature.

  15. Ice crystal c-axis orientation and mean grain size measurements from the Dome Summit South ice core, Law Dome, East Antarctica

    NASA Astrophysics Data System (ADS)

    Treverrow, Adam; Jun, Li; Jacka, Tim H.

    2016-06-01

    We present measurements of crystal c-axis orientations and mean grain area from the Dome Summit South (DSS) ice core drilled on Law Dome, East Antarctica. All measurements were made on location at the borehole site during drilling operations. The data are from 185 individual thin sections obtained between a depth of 117 m below the surface and the bottom of the DSS core at a depth of 1196 m. The median number of c-axis orientations recorded in each thin section was 100, with values ranging from 5 through to 111 orientations. The data from all 185 thin sections are provided in a single comma-separated value (csv) formatted file which contains the c-axis orientations in polar coordinates, depth information for each core section from which the data were obtained, the mean grain area calculated for each thin section and other data related to the drilling site. The data set is also available as a MATLAB™ structure array. Additionally, the c-axis orientation data from each of the 185 thin sections are summarized graphically in figures containing a Schmidt diagram, histogram of c-axis colatitudes and rose plot of c-axis azimuths. All these data are referenced by doi:10.4225/15/5669050CC1B3B and are available free of charge at https://data.antarctica.gov.au.<

  16. Highly c-axis-oriented monocrystalline Pb(Zr, Ti)O₃ thin films on si wafer prepared by fast cooling immediately after sputter deposition.

    PubMed

    Yoshida, Shinya; Hanzawa, Hiroaki; Wasa, Kiyotaka; Esashi, Masayoshi; Tanaka, Shuji

    2014-09-01

    We successfully developed sputter deposition technology to obtain a highly c-axis-oriented monocrystalline Pb(Zr, Ti)O3 (PZT) thin film on a Si wafer by fast cooling (~-180°C/min) of the substrate after deposition. The c-axis orientation ratio of a fast-cooled film was about 90%, whereas that of a slow-cooled (~-40°C/min) film was only 10%. The c-axis-oriented monocrystalline Pb(Zr0.5, Ti0.5)O3 films showed reasonably large piezoelectric coefficients, e(31,f) = ~-11 C/m(2), with remarkably small dielectric constants, ϵ(r) = ~220. As a result, an excellent figure of merit (FOM) was obtained for piezoelectric microelectromechanical systems (MEMS) such as a piezoelectric gyroscope. This c-axis orientation technology on Si will extend industrial applications of PZT-based thin films and contribute further to the development of piezoelectric MEMS. PMID:25167155

  17. Transparent and conducting intrinsic ZnO thin films prepared at high growth-rate with c-axis orientation and pyramidal surface texture

    NASA Astrophysics Data System (ADS)

    Mondal, Praloy; Das, Debajyoti

    2013-12-01

    The growth of ZnO thin films has been optimized by adjusting the intrinsic ion vacancies, by controlling the RF power applied to the plasma in magnetron sputtering. Preferred c-axis oriented intrinsic ZnO films with largest grain size and a hexagonal wurtzite structure, exhibiting high room temperature conductivity, σ ∼ 1.37 S/cm, high transparency, ∼80-90% within 450-800 nm and ∼90-96% within 800-1900 nm, low reflectance (<5% in the visible range) was obtained at a very high deposition rate ∼214 nm/min, at 300 °C, by maintaining higher concentration of Zn interstitials or singly ionized oxygen vacancy, corresponding to an optimized RF power of 200 W. Films have lowest internal stress, smallest dissipation factor defined as ɛ2/ɛ1, and the specific pyramidal surface texture creates enough surface roughness that helps to improve the light scattering from the surface and makes it suitable for efficient use in thin-film silicon solar cells. With increasing RF power beyond 200 W, the Zn-O bond length reduces promptly and the internal stress increases monotonically approaching toward a virtual saturation. The preferred crystallographic alignment shifts from (0 0 2) to (1 0 3), i.e., from c to a-axis orientation, as the surface energy of ZnO crystal changes due to the increase in the Zn-to-ZnO ion ratio in the plasma caused by the plausible de-oxygenation of ZnO at elevated RF powers. Oxygen deficient ZnO films having the flower-like surface texture prepared with a very high deposition rate ∼554 nm/min at 500 W could indeed make the material suitable for gas and chemical sensing applications.

  18. Synthesis and properties of highly c-axis oriented PbTiO3 thin films prepared by and MOCVD method

    NASA Astrophysics Data System (ADS)

    Chen, Xian-Tong; Yamane, Hisanori; Kaya, Kiyoshi

    1992-08-01

    Thin films of PbTiO3 were prepared on MgO(100) substrates by chemical vapor deposition using Pb(C2H5)4 (PbEt) and Ti(OC3H7)4 (TTIP) as sources. With decreasing Pb/Ti molar ratio from 1.2 to 1 the degree of c-axis orientation increased. Highly c-axis oriented PbTiO3 thin films were epitaxially grown at 500°C and 2 kPa. The films were transparent and had a refractive index (n) of 2.64 at 632.8 nm which was about 2% lower than that of a single PbTiO3 crystal (n ≈ 2.7). The films prepared on (100)-oriented Pt electrodes deposited on MgO(100) substrates at 600°C and 2 kPa also showed a prominent c-axis orientation and had a dielectric constant of 90.

  19. SrFeO amorphous underlayer for fabrication of c-axis perpendicularly orientated strontium hexaferrite films by pulsed laser deposition

    NASA Astrophysics Data System (ADS)

    Masoudpanah, S. M.; Ong, C. K.

    2013-09-01

    A thin amorphous SrFeO underlayer on Si(100) substrate was pulse laser deposited as an underlayer for the growth of c-axis perpendicularly oriented strontium hexaferrite (SrFe12O19) films. The amorphous SrFeO underlayer was deposited at different temperatures in the range from room temperature to 700 °C, while the SrFe12O19 film was deposited at 700 °C. The SrFe12O19 films exhibited slightly perpendicular magnetic anisotropy by the rather higher coercivities in perpendicular direction (Hc⊥) than those for the in-plane direction (Hc||), due to the c-axis perpendicular orientation. The magnetization and coercivities of the SrFe12O19 film increase, but the magnetic anisotropy (ΔHc=Hc⊥-Hc||) increases firstly and then decreases, as the SrFeO underlayer deposition temperature increases.

  20. Growth of thin, c-axis oriented Sr-doped LaP3O9 electrolyte membranes in condensed phosphoric acid solutions

    NASA Astrophysics Data System (ADS)

    Hatada, Naoyuki; Takahashi, Kota; Adachi, Yoshinobu; Uda, Tetsuya

    2016-08-01

    Proton-conducting Sr-doped LaP3O9 has potential application as electrolytes in intermediate temperature fuel cells, but reduction of the electrical resistance of the electrolyte membranes is necessary for practical applications. In this study, we focused on reducing the resistance by reducing the electrolyte thickness, while maintaining a preferable microstructure for proton conduction (c-axis orientation and absence of the small-crystal layer). Thin, c-axis oriented Sr-doped LaP3O9 membranes were successfully obtained in condensed phosphoric acid solutions by a novel "two-step precipitation method". In this method, Sr-doped LaP3O9 powder was artificially deposited on the surface of the carbon paper supports as seeds, and then columnar crystals were grown "downward" in the solutions. We expect that this method will be utilized to produce LaP3O9 electrolyte membranes with lower electrical resistance.

  1. c-axis preferential orientation of hydroxyapatite accounts for the high wear resistance of the teeth of black carp (Mylopharyngodon piceus)

    PubMed Central

    Fu, Jimin; He, Chong; Xia, Biao; Li, Yan; Feng, Qiong; Yin, Qifang; Shi, Xinghua; Feng, Xue; Wang, Hongtao; Yao, Haimin

    2016-01-01

    Biological armors such as mollusk shells have long been recognized and studied for their values in inspiring novel designs of engineering materials with higher toughness and strength. However, no material is invincible and biological armors also have their rivals. In this paper, our attention is focused on the teeth of black carp (Mylopharyngodon piceus) which is a predator of shelled mollusks like snails and mussels. Nanoscratching test on the enameloid, the outermost layer of the teeth, indicates that the natural occlusal surface (OS) has much higher wear resistance compared to the other sections. Subsequent X-ray diffraction analysis reveals that the hydroxyapatite (HAp) crystallites in the vicinity of OS possess c-axis preferential orientation. The superior wear resistance of black carp teeth is attributed to the c-axis preferential orientation of HAp near the OS since the (001) surface of HAp crystal, which is perpendicular to the c-axis, exhibits much better wear resistance compared to the other surfaces as demonstrated by the molecular dynamics simulation. Our results not only shed light on the origin of the good wear resistance exhibited by the black carp teeth but are of great value to the design of engineering materials with better abrasion resistance. PMID:27001150

  2. c-axis preferential orientation of hydroxyapatite accounts for the high wear resistance of the teeth of black carp (Mylopharyngodon piceus)

    NASA Astrophysics Data System (ADS)

    Fu, Jimin; He, Chong; Xia, Biao; Li, Yan; Feng, Qiong; Yin, Qifang; Shi, Xinghua; Feng, Xue; Wang, Hongtao; Yao, Haimin

    2016-03-01

    Biological armors such as mollusk shells have long been recognized and studied for their values in inspiring novel designs of engineering materials with higher toughness and strength. However, no material is invincible and biological armors also have their rivals. In this paper, our attention is focused on the teeth of black carp (Mylopharyngodon piceus) which is a predator of shelled mollusks like snails and mussels. Nanoscratching test on the enameloid, the outermost layer of the teeth, indicates that the natural occlusal surface (OS) has much higher wear resistance compared to the other sections. Subsequent X-ray diffraction analysis reveals that the hydroxyapatite (HAp) crystallites in the vicinity of OS possess c-axis preferential orientation. The superior wear resistance of black carp teeth is attributed to the c-axis preferential orientation of HAp near the OS since the (001) surface of HAp crystal, which is perpendicular to the c-axis, exhibits much better wear resistance compared to the other surfaces as demonstrated by the molecular dynamics simulation. Our results not only shed light on the origin of the good wear resistance exhibited by the black carp teeth but are of great value to the design of engineering materials with better abrasion resistance.

  3. c-axis preferential orientation of hydroxyapatite accounts for the high wear resistance of the teeth of black carp (Mylopharyngodon piceus).

    PubMed

    Fu, Jimin; He, Chong; Xia, Biao; Li, Yan; Feng, Qiong; Yin, Qifang; Shi, Xinghua; Feng, Xue; Wang, Hongtao; Yao, Haimin

    2016-01-01

    Biological armors such as mollusk shells have long been recognized and studied for their values in inspiring novel designs of engineering materials with higher toughness and strength. However, no material is invincible and biological armors also have their rivals. In this paper, our attention is focused on the teeth of black carp (Mylopharyngodon piceus) which is a predator of shelled mollusks like snails and mussels. Nanoscratching test on the enameloid, the outermost layer of the teeth, indicates that the natural occlusal surface (OS) has much higher wear resistance compared to the other sections. Subsequent X-ray diffraction analysis reveals that the hydroxyapatite (HAp) crystallites in the vicinity of OS possess c-axis preferential orientation. The superior wear resistance of black carp teeth is attributed to the c-axis preferential orientation of HAp near the OS since the (001) surface of HAp crystal, which is perpendicular to the c-axis, exhibits much better wear resistance compared to the other surfaces as demonstrated by the molecular dynamics simulation. Our results not only shed light on the origin of the good wear resistance exhibited by the black carp teeth but are of great value to the design of engineering materials with better abrasion resistance. PMID:27001150

  4. c-Axis oriented thin Bi 2Sr 2CaCu 2O 8+δ-films prepared by flash- evaporation

    NASA Astrophysics Data System (ADS)

    Stölzel, C.; Huth, M.; Adrian, H.

    1992-12-01

    Superconducting thin films of Bi 2Sr 2CaCu 2O 8+δ were prepared by flash-evaporation. Fine grained powder of the stoichiometry Bi 2Sr 2.5Ca 2Cu 2O y was periodically dropped onto and flash-evaporated by a 1900°C hot tantalum boat and deposited on an unheated <100>-SrTiO 3-substrate. Post-annealing yielded highly c-axis oriented, single phase films, which showed superconductivity up to 81 K. Resistive transitions and critical current densities were measured in magnetic fields up to 6 T with the field direction parallel and perpendicular to the c-axis.

  5. Impact of titanium layer and silicon substrate properties on the microstructure of c-axis oriented AlN thin films

    NASA Astrophysics Data System (ADS)

    Wistrela, E.; Bittner, A.; Schmid, U.

    2015-05-01

    Highly c-axis orientated sputter deposited aluminium nitride (AlN) thin films are widely used as piezoelectric layers in micro-electro-mechanical systems (MEMS). Therefore, stable and reliable deposition and patterning of the AlN thin films in the fabrication process of such devices is of utmost importance. In this work, we study the wet chemical etching behavior of highly c-axis oriented AlN layers as well as the film-related residuals after the etching procedure. To investigate the impact of the underlying material on the quality of the AlN films they are either deposited on pure silicon (Si) substrates or on Si substrates covered with a sputter-deposited thin titanium (Ti) film. The 620 nm thin AlN layers are synthesized simultaneously onto both substrate types and subsequently wet-chemical etched in a phosphorous acid based etching solution at a temperature of 80°C. We demonstrate a significant difference in surface roughness of the untreated AlN films when sputter-deposited on Ti or pure Si. Furthermore, we analyze the piezoelectric properties of the deposited films. Although the XRD analyses indicate a high c-axis orientated wurtzite structure for all deposited films, the absolute value of the piezoelectric coefficients |d33| of AlN thin films synthesized on Ti are 0.4-4.3 pC/N, whereas corresponding values of 5.2-6 pC/N are determined at those deposited on pure Si substrates,. Finally, after wet chemically etching a porous, but homogeneous AlN microstructure is observed for samples synthesized onto Ti layers, whereas AlN layers deposited directly on Si substrate are either etched very inhomogenously or almost completely with some etch resistant pyramidal-shaped residues. This might be due to a local change in polarity within the AlN layer.

  6. Fast epitaxial growth of a-axis- and c-axis-oriented YBa 2Cu 3O 7- δ films on (1 0 0) LaAlO 3 substrate by laser chemical vapor deposition

    NASA Astrophysics Data System (ADS)

    Zhao, Pei; Ito, Akihiko; Tu, Rong; Goto, Takashi

    2011-02-01

    a-axis- and c-axis-oriented YBa2Cu3O7-δ (YBCO) films were epitaxially grown on (1 0 0) LaAlO3 substrates by laser chemical vapor deposition. The preferred orientation in the YBCO film changed from the a-axis to the c-axis with increasing laser powers from 77 to 158 W (the deposition temperatures from 951 to 1087 K). The a-axis-oriented YBCO film showed in-plane epitaxial growth of YBCO [0 0 1]//LAO [0 0 1], and the c-axis-oriented YBCO film showed that of YBCO [0 1 0]//LAO [0 0 1]. A c-axis-oriented YBCO film with a high critical temperature of 90 K was prepared at a deposition rate of 90 μm h-1, about 2-1000 times higher than that of metalorganic chemical vapor deposition.

  7. Epitaxial c-axis oriented BaTiO{sub 3} thin films on SrTiO{sub 3}-buffered Si(001) by atomic layer deposition

    SciTech Connect

    Ngo, Thong Q.; McDaniel, Martin D.; Ekerdt, John G.; Posadas, Agham B.; Demkov, Alexander A.; Hu, Chengqing; Yu, Edward T.; Bruley, John

    2014-02-24

    Atomic layer deposition (ALD) of epitaxial c-axis oriented BaTiO{sub 3} (BTO) on Si(001) using a thin (1.6 nm) buffer layer of SrTiO{sub 3} (STO) grown by molecular beam epitaxy is reported. The ALD growth of crystalline BTO films at 225  °C used barium bis(triisopropylcyclopentadienyl), titanium tetraisopropoxide, and water as co-reactants. X-ray diffraction (XRD) reveals a high degree of crystallinity and c-axis orientation of as-deposited BTO films. Crystallinity is improved after vacuum annealing at 600  °C. Two-dimensional XRD confirms the tetragonal structure and orientation of 7–20-nm thick films. The effect of the annealing process on the BTO structure is discussed. A clean STO/Si interface is found using in-situ X-ray photoelectron spectroscopy and confirmed by cross-sectional scanning transmission electron microscopy. The capacitance-voltage characteristics of 7–20 nm-thick BTO films are examined and show an effective dielectric constant of ∼660 for the heterostructure.

  8. Properties of c-axis-aligned crystalline indium-gallium-zinc oxide field-effect transistors fabricated through a tapered-trench gate process

    NASA Astrophysics Data System (ADS)

    Asami, Yoshinobu; Kurata, Motomu; Okazaki, Yutaka; Higa, Eiji; Matsubayashi, Daisuke; Okamoto, Satoru; Sasagawa, Shinya; Moriwaka, Tomoaki; Kakehata, Tetsuya; Yakubo, Yuto; Kato, Kiyoshi; Hamada, Takashi; Sakakura, Masayuki; Hayakawa, Masahiko; Yamazaki, Shunpei

    2016-04-01

    To achieve both low power consumption and high-speed operation, we fabricated c-axis-aligned crystalline indium-gallium-zinc oxide (CAAC-IGZO) field-effect transistors (FETs) with In-rich IGZO and common IGZO (\\text{In}:\\text{Ga}:\\text{Zn} = 1:1:1 in atomic ratio) active layers through a simple process using trench gates, and evaluated their characteristics. The results confirm that 60-nm-node IGZO FETs fabricated through a 450 °C process show an extremely low off-state current below the detection limit (at most 2 × 10-16 A) even at a measurement temperature of 150 °C. The results also reveal that the FETs with the In-rich IGZO active layer show a higher on-state current than those with the common IGZO active layer and have excellent frequency characteristics with a cutoff frequency and a maximum oscillation frequency of up to 20 and 6 GHz, respectively. Thus, we demonstrated that CAAC-IGZO FETs with trench gates are promising for achieving both low power consumption and high-speed operation.

  9. Preparation of highly c-axis oriented AlN thin films on Hastelloy tapes with Y2O3 buffer layer for flexible SAW sensor applications

    NASA Astrophysics Data System (ADS)

    Peng, Bin; Jiang, Jianying; Chen, Guo; Shu, Lin; Feng, Jie; Zhang, Wanli; Liu, Xinzhao

    2016-02-01

    Highly c-axis oriented aluminum nitrade (AlN) films were successfully deposited on flexible Hastelloy tapes by middle-frequency magnetron sputtering. The microstructure and piezoelectric properties of the AlN films were investigated. The results show that the AlN films deposited directly on the bare Hastelloy substrate have rough surface with root mean square (RMS) roughness of 32.43nm and its full width at half maximum (FWHM) of the AlN (0002) peak is 12.5∘. However, the AlN films deposited on the Hastelloy substrate with Y2O3 buffer layer show smooth surface with RMS roughness of 5.46nm and its FWHM of the AlN (0002) peak is only 3.7∘. The piezoelectric coefficient d33 of the AlN films deposited on the Y2O3/Hastelloy substrate is larger than three times that of the AlN films deposited on the bare Hastelloy substrate. The prepared highly c-axis oriented AlN films can be used to develop high-temperature flexible SAW sensors.

  10. Influence of c-axis orientation and scandium concentration on infrared active modes of magnetron sputtered ScxAl1-xN thin films

    NASA Astrophysics Data System (ADS)

    Mayrhofer, P. M.; Eisenmenger-Sittner, C.; Euchner, H.; Bittner, A.; Schmid, U.

    2013-12-01

    Doping of wurtzite aluminium nitride (AlN) with scandium (Sc) significantly enhances the piezoelectric properties of AlN. ScxAl1-xN thin films with different Sc concentrations (x = 0 to 0.15) were deposited by DC reactive magnetron sputtering. Infrared (IR) absorbance spectroscopy was applied to investigate the Sc concentration dependent shift of the IR active modes E1(TO) and A1(TO). These results are compared to ab initio simulations, being in excellent agreement with the experimental findings. In addition, IR spectroscopy is established as an economical and fast method to distinguish between thin films with a high degree of c-axis orientation and those exhibiting mixed orientations.

  11. Measurement of c-axis angular orientation in calcite (CaCO3) nanocrystals using X-ray absorption spectroscopy

    PubMed Central

    Gilbert, P. U. P. A.; Young, Anthony; Coppersmith, Susan N.

    2011-01-01

    We demonstrate that the ability to manipulate the polarization of synchrotron radiation can be exploited to enhance the capabilities of X-ray absorption near-edge structure (XANES) spectroscopy, to include linear dichroism effects. By acquiring spectra at the same photon energies but different polarizations, and using a photoelectron emission spectromicroscope (PEEM), one can quantitatively determine the angular orientation of micro- and nanocrystals with a spatial resolution down to 10 nm. XANES-PEEM instruments are already present at most synchrotrons, hence these methods are readily available. The methods are demonstrated here on geologic calcite (CaCO3) and used to investigate the prismatic layer of a mollusk shell, Pinctada fucata. These XANES-PEEM data reveal multiply oriented nanocrystals within calcite prisms, previously thought to be monocrystalline. The subdivision into multiply oriented nanocrystals, spread by more than 50°, may explain the excellent mechanical properties of the prismatic layer, known for decades but never explained. PMID:21693647

  12. Growth of c-axis-oriented Bi 3.15Nd 0.85Ti 3O 12 thin films for ferroelectric memory applications

    NASA Astrophysics Data System (ADS)

    Giridharan, N. V.; Madeswaran, S.; Jayavel, R.

    2005-02-01

    Highly c-axis-oriented Bi 3.15Nd 0.85Ti 3O 12 (BNdT) thin films were grown on Pt/TiO 2/SiO 2/Si (1 0 0) substrates using the method of metalorganic sol decomposition by optimizing the parameters such as excess bismuth concentration, crystallization temperature, film thickness and crystallization ambient. The BNdT film capacitor with a top Pt electrode showed a large remnant polarization (2 Pr) of 80 μC/cm 2 at an applied voltage of 10 V and exhibited a fatigue-free behaviour up to 2×10 9 switching cycles at a frequency of 1 kHz. These experimental results reveal that Nd-substituted Bi 4Ti 3O 12 thin films can be used as capacitors in ferroelectric access memories.

  13. Enhanced thermoelectric performance in c-axis oriented Ca3Co4O9 films by Ag addition through multiple annealing

    NASA Astrophysics Data System (ADS)

    Liu, Shengman; Zhu, Caixia; Ge, Xianghong; Wang, Tingtai; Feng, Junlan; Yang, Linfeng

    2016-06-01

    The c-axis oriented Ca3Co4O9 (CCO) films without and with 5 wt.% Ag addition were prepared by chemical solution deposition (CSD) through multiple annealing processing on single crystal LaAlO3 (001) substrates. With Ag addition, the resistivity at 300 K is decreased to 2.25 mΩṡcm, the Seebeck coefficient at 300 K is enhanced to 106 μV/K and the power factor at 300 K can reach as high as 0.5 mWṡK‑1ṡm‑2, which is the highest value among CCO films prepared by CSD. The results suggest that Ag addition is a very effective route to improve the thermoelectric properties of CCO films through multiple annealing processing.

  14. Defect free C-axis oriented zinc oxide (ZnO) films grown at room temperature using RF magnetron sputtering

    NASA Astrophysics Data System (ADS)

    Kunj, Saurabh; Sreenivas, K.

    2016-05-01

    Radio frequency Magnetron sputtering technique was employed to fabricate ZnO thin films on quartz substrate at room temperature. The effect of varying oxygen to argon (O2/Ar) gas ratio on the structural and photoluminescence properties of the film is analyzed.X-ray diffraction (XRD) spectra reveals the formation of hexagonal wurtzite structured ZnO thin films with preferred orientation along (002) plane. Photoluminescence (PL) characterization reveals the preparation of highly crystalline films exhibiting intense Ultraviolet (UV) emission with negligible amount of defects as indicated by the absence of Deep Level Emission (DLE) in the PL spectra.

  15. Synthesis and characterization of 10 nm thick piezoelectric AlN films with high c-axis orientation for miniaturized nanoelectromechanical devices

    SciTech Connect

    Zaghloul, Usama; Piazza, Gianluca

    2014-06-23

    The scaling of piezoelectric nanoelectromechanical systems (NEMS) is challenged by the synthesis of ultrathin and high quality piezoelectric films on very thin electrodes. We report the synthesis and characterization of the thinnest piezoelectric aluminum nitride (AlN) films (10 nm) ever deposited on ultrathin platinum layers (2–5 nm) using reactive sputtering. X-ray diffraction, high-resolution transmission electron microscopy, and fast Fourier transform analyses confirmed the proper crystal orientation, fine columnar texture, and the continuous lattice structure within individual grains in the deposited AlN nanometer thick films. The average extracted d{sub 31} piezoelectric coefficient for the synthesized films is −1.73 pC/N, which is comparable to the reported values for micron thick and highly c-axis oriented AlN films. The 10 nm AlN films were employed to demonstrate two different types of optimized piezoelectric nanoactuators. The unimorph actuators exhibit vertical displacements as large as 1.1 μm at 0.7 V for 25 μm long and 30 nm thick beams. These results have a great potential to realize miniaturized NEMS relays with extremely low voltage, high frequency resonators, and ultrasensitive sensors.

  16. Plasma-assisted hot filament chemical vapor deposition of AlN thin films on ZnO buffer layer: toward highly c-axis-oriented, uniform, insulative films

    NASA Astrophysics Data System (ADS)

    Alizadeh, M.; Mehdipour, H.; Ganesh, V.; Ameera, A. N.; Goh, B. T.; Shuhaimi, A.; Rahman, S. A.

    2014-12-01

    c-Axis-oriented aluminum nitride (AlN) thin film with improved quality was deposited on Si(111) substrate using ZnO buffer layer by plasma-assisted hot filament chemical vapor deposition. The optical and electrical properties and surface morphology as well as elemental composition of the AlN films deposited with and without ZnO buffer layer were investigated using a host of measurement techniques: X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS), Raman spectroscopy, field emission scanning electron microscopy (FESEM), and current-voltage (I-V) characteristic measurement. The XRD and XPS results reveal that the AlN/ZnO/Si films are free of metallic Al particles. Also, cross-sectional FESEM observations suggest formation of a well-aligned, uniform, continuous, and highly (002) oriented structure for a bi-layered AlN film when Si(111) is covered with ZnO buffer. Moreover, a decrease in full width at half maximum of the E2 (high)-mode peak in Raman spectrum indicates a better crystallinity for the AlN films formed on ZnO/Si substrate. Finally, I-V curves obtained indicate that the electrical behavior of the AlN thin films switches from conductive to insulative when film is grown on a ZnO-buffered Si substrate.

  17. High-coercivity, c-axis oriented Nd{sub 2}Fe{sub 14}B films grown by molecular beam epitaxy

    SciTech Connect

    Keavney, D.J.; Fullerton, E.E.; Pearson, J.E.; Bader, S.D.

    1996-12-31

    Thin films of Nd{sub 2}Fe{sub 14}B with a c-axis orientation and bulk- like magnetic properties were grown with thickness as low as 300 {Angstrom}. They were grown on single-crystal MgO(100) wafers overcoated with epitaxial Mo(100) buffer layers. The 2-14-1 phase were crystallized either by sequential deposition or co-deposition of Fe, Nd, and B from pure elemental evaporation sources onto 600-700 C substrates. Structure of each film was characterized in-situ with RHEED and ex-situ with XRD. For the sequentially deposited films, the in-plane saturation field is 60-70 kOe at 300 K, consistent with the bulk anisotropy field of 73 kOe. The spin-reorientation transition at 135 K can also be clearly seen in the in-plane and out-of-plane magnetization vs temperature data. The out-of-plane coercivities range from 15-20 kOe at 20 K and 3-8 kOe at 300 K. Co-deposition results in a multiphase structure, with Nd{sub 2}Fe{sub 14}B now the minority phase. The multiphase structure results in reduced perpendicular anisotropy.

  18. YBa2Cu3O(7-delta)/Au/Nb sandwich geometry SNS weak links on c-axis oriented YBa2Cu3O(7-delta)

    NASA Technical Reports Server (NTRS)

    Foote, M. C.; Hunt, B. D.; Bajuk, L. J.

    1991-01-01

    Sandwich geometry superconductor/normal metal/superconductor structures have been fabricated on LaAlO3 and cubic zirconia with laser-ablated, c-axis-oriented YBa2Cu3O(7-delta) base electrodes, 100-600 A of Au, and Nb counter electrodes, all formed in situ without breaking vacuum. Junctions range in size from 5 to 50 micron on a side. Four probe I-V measurements at 4.2 K show RnA products as low as 6 x 10 to the -9th sq cm and critical current densities up to 5.2 kA/sq cm. AC Josephson steps were observed with the application of 10-GHz radiation. The temperature dependence of Jc and the observation of the AC Josephson effect suggest that true supercurrents are present and that they do indeed represent the characteristics of the YBa2Cu3O(7-delta)/Au/Nb structure. The best results were obtained when the devices were annealed at about 450 C in O2 for 30 min after Au deposition.

  19. The impact of argon admixture on the c-axis oriented growth of direct current magnetron sputtered ScxAl1-xN thin films

    NASA Astrophysics Data System (ADS)

    Mayrhofer, P. M.; Eisenmenger-Sittner, C.; Stöger-Pollach, M.; Euchner, H.; Bittner, A.; Schmid, U.

    2014-05-01

    The piezoelectric properties of wurtzite aluminium nitride (w-AlN) are enhanced by alloying with scandium (Sc), thus offering superior properties for applications in micro electro-mechanical systems devices. ScxAl1-xN thin films have been prepared by DC reactive magnetron sputtering on Si (100) substrates from a single target. When targeting a concentration range from x = 0 up to x = 0.15, the preparation conditions have been optimized by varying the Ar/N2 ratio in the sputtering gas. To incorporate an increasing Sc concentration, a higher Ar/N2 ratio has to be applied during the deposition process. Hence, the argon concentration in the sputtering gas becomes a crucial parameter for microstructure-related parameters. To determine phase purity, degree of c-axis orientation, lattice parameter, and grain size, the ScxAl1-xN thin films were investigated by techniques, such as scanning electron microscopy, transmission electron microscopy, and X-ray diffraction.

  20. Highly c-axis oriented growth of GaN film on sapphire (0001) by laser molecular beam epitaxy using HVPE grown GaN bulk target

    SciTech Connect

    Kushvaha, S. S.; Kumar, M. Senthil; Maurya, K. K.; Dalai, M. K.; Sharma, Nita D.

    2013-09-15

    Growth temperature dependant surface morphology and crystalline properties of the epitaxial GaN layers grown on pre-nitridated sapphire (0001) substrates by laser molecular beam epitaxy (LMBE) were investigated in the range of 500–750 °C. The grown GaN films were characterized using high resolution x-ray diffraction, atomic force microscopy (AFM), micro-Raman spectroscopy, and secondary ion mass spectroscopy (SIMS). The x-ray rocking curve full width at a half maximum (FWHM) value for (0002) reflection dramatically decreased from 1582 arc sec to 153 arc sec when the growth temperature was increased from 500 °C to 600 °C and the value further decreased with increase of growth temperature up to 720 °C. A highly c-axis oriented GaN epitaxial film was obtained at 720 °C with a (0002) plane rocking curve FWHM value as low as 102 arc sec. From AFM studies, it is observed that the GaN grain size also increased with increasing growth temperature and flat, large lateral grains of size 200-300 nm was obtained for the film grown at 720 °C. The micro-Raman spectroscopy studies also exhibited the high-quality wurtzite nature of GaN film grown on sapphire at 720 °C. The SIMS measurements revealed a non-traceable amount of background oxygen impurity in the grown GaN films. The results show that the growth temperature strongly influences the surface morphology and crystalline quality of the epitaxial GaN films on sapphire grown by LMBE.

  1. Fabrication of dynamic oxide semiconductor random access memory with 3.9 fF storage capacitance and greater than 1 h retention by using c-axis aligned crystalline oxide semiconductor transistor with L of 60 nm

    NASA Astrophysics Data System (ADS)

    Onuki, Tatsuya; Kato, Kiyoshi; Nomura, Masumi; Yakubo, Yuto; Nagatsuka, Shuhei; Matsuzaki, Takanori; Hondo, Suguru; Hata, Yuki; Okazaki, Yutaka; Nagai, Masaharu; Atsumi, Tomoaki; Sakakura, Masayuki; Okuda, Takashi; Yamamoto, Yoshitaka; Yamazaki, Shunpei

    2015-04-01

    A dynamic oxide semiconductor random access memory (DOSRAM) array that achieves reduction in storage capacitance (Cs) and decrease in refresh rate has been fabricated by using a c-axis aligned crystalline oxide semiconductor (CAAC-OS) transistor (L = 60 nm) with an extremely low off-state current. We have confirmed that this array, composed of cells that include a CAAC-OS transistor with W/L = 40 nm/60 nm using InGaZnO and a 3.9 fF storage capacitor, operates with write and read times of 5 ns. Therefore, DOSRAM can ensure sufficient Cs while maintaining operation speed comparable to that of dynamic random access memory (DRAM). We have found that the read signal voltage of DOSRAM is changed by approximately 30 mV after 1 h at 85 °C. Thus, DOSRAM is a promising replacement for DRAM.

  2. In-plane and out-of-plane dissipation in {ital c}-axis-oriented (Bi,Pb){sub 2}Sr{sub 2}Ca{sub 2}Cu{sub 3}O {sub x} silver-sheathed tapes

    SciTech Connect

    Xu, G.; Sun, Y.; Du, J. |; Zhou, Y.; Zeng, R.; Fu, X.; Hua, P.

    1997-02-01

    The temperature dependence of the out-of-plane and in-plane resistance of a c-axis-oriented (Bi,Pb){sub 2}Sr{sub 2}Ca{sub 2}Cu{sub 3}O {sub x} silver-sheathed tape with high critical current density (J{sub c}{gt}2{times}10{sup 4} A/cm{sup 2}, 77 K, 0 T) has been investigated under applied fields up to 0.9 T. It is found that the in-plane and the out-of-plane resistance transitions are quite different: (1) The out-of-plane zero resistance temperature is much higher than the in-plane one, i.e., T{sub c}{sup ab}(H){lt}T{sub c}{sup c}(H), and the difference increases with magnetic field; (2) the out-of-plane zero resistance temperature corresponds to the c-axis decoupling temperature. These phenomena are attributed to different dissipation mechanisms. The in-plane dissipation at low temperature results from the thermally activated flux{endash}flow, while the out-of-plane dissipation originates from the Josephson junction dissipation of weakly coupled c-axis grain boundaries and/or intrinsic Josephson junctions.{copyright} {ital 1997 American Institute of Physics.}

  3. Orienting members in a preselected rotary alignment

    DOEpatents

    Williams, Ray E.

    1987-01-01

    An apparatus for orienting members and for maintaining their rotary alignment during orienting members. The apparatus comprises first and second cylindrical elements, a rotation prevention element, a collar and a retainer. Each element has an outside wall, and first and second ends, each end having an outside edge. The first element has portions defining a first plurality of notches located at the outside edge of its first end. An external threaded portion is on the outside wall of the first element and next to the first plurality of notches. The second element has portions defining a second plurality of notches located at the outside edge of its first end. The first plurality has a different number than the second plurality. The first ends of the first and second tubes have substantially the same outside diameter and are abutted during connection so that a cavity is formed whenever first and second tube notches substantially overlap. A rotation prevention element is placed in the cavity to prevent rotation of the first and second elements. A collar with an internal threaded portion is slidably disposed about the second element. The internal threaded portion engages the external threaded portion of the first element to connect the elements. A lip connected to the collar prevents separation of the collar from the second element.

  4. Influence of c-axis orientation and scandium concentration on infrared active modes of magnetron sputtered Sc{sub x}Al{sub 1−x}N thin films

    SciTech Connect

    Mayrhofer, P. M.; Bittner, A.; Schmid, U.; Eisenmenger-Sittner, C.; Euchner, H.

    2013-12-16

    Doping of wurtzite aluminium nitride (AlN) with scandium (Sc) significantly enhances the piezoelectric properties of AlN. Sc{sub x}Al{sub 1−x}N thin films with different Sc concentrations (x = 0 to 0.15) were deposited by DC reactive magnetron sputtering. Infrared (IR) absorbance spectroscopy was applied to investigate the Sc concentration dependent shift of the IR active modes E{sub 1}(TO) and A{sub 1}(TO). These results are compared to ab initio simulations, being in excellent agreement with the experimental findings. In addition, IR spectroscopy is established as an economical and fast method to distinguish between thin films with a high degree of c-axis orientation and those exhibiting mixed orientations.

  5. Investigation on orientation, epitaxial growth and microstructure of a-axis-, c-axis-, (103)/(110)- and (113)-oriented YBa2Cu3O7-δ films prepared on (001), (110) and (111) SrTiO3 single crystal substrates by spray atomizing and coprecipitating laser chemical vapor deposition

    NASA Astrophysics Data System (ADS)

    Zhao, Pei; Wang, Ying; Huang, Zhi liang; Mao, Yangwu; Xu, Yuan Lai

    2015-04-01

    a-axis-, c-axis-, (103)/(110)- and (113)-oriented YBa2Cu3O7-δ (YBCO) films were pareared by spray atomizing and coprecipitating laser chemical vapor deposition. The surface of the a-axis-oriented YBCO film consisted of rectangular needle-like grains whose in-plane epitaxial growth relationship was YBCO [100] // STO [001] (YBCO [001] // STO [100]), and that of the c-axis-oriented YBCO film consisted of dense flat surface with epitaxial growth relationship of YBCO [001] // STO [001] (YBCO [100] //STO [100]). For the (103)/(110)-oriented and (113)-oriented YBCO film, they showed wedge-shaped and triangle-shaped grains, with corresponding in-plane epitaxial growth relationship of YBCO [110] // STO [110] (YBCO [010] // STO [010]) and YBCO [100] // STO [100] (YBCO [113] // STO [111], respectively.

  6. Fast feature identification for holographic tracking: the orientation alignment transform.

    PubMed

    Krishnatreya, Bhaskar Jyoti; Grier, David G

    2014-06-01

    The concentric fringe patterns created by features in holograms may be associated with a complex-valued orientational order field. Convolution with an orientational alignment operator then identifies centers of symmetry that correspond to the two-dimensional positions of the features. Feature identification through orientational alignment is reminiscent of voting algorithms such as Hough transforms, but may be implemented with fast convolution methods, and so can be orders of magnitude faster. PMID:24921472

  7. Spherulitic (c-axis) Growth for Terrestrial (Mauna Kea, Hawaii) and Martian Hematite "blueberries"

    NASA Technical Reports Server (NTRS)

    Golden, D. C.; Ming, D. W.; Morris, R. V.

    2006-01-01

    Hematite concentrations observed by Thermal Emission Spectrometer (TES) onboard Mars Global Surveyor were considered a possible indicator for aqueous processes on Mars. Observations made by Opportunity show that the hematite at Meridiani Planum is present as spherules ( blueberries) and their fragments. The internal structure of the hematite spherules is not discernable at the resolution limit (approx.30 m/pixel) of Opportunity s Microscopic Imager (MI). A terrestrial analog for martian hematite spherules are spherules from hydrothermally altered and sulfate-rich tephra from the summit region of Mauna Kea volcano, Hawaii. The objective of this study is to determine the crystal growth fabric of the Mauna Kea hematite spherules using transmission electron microscopy (TEM) techniques and to relate that crystalline fabric to the observed TES signature of Meridiani Planum "blueberries." TEM analysis of Mauna Kea spherules exhibited a radial growth pattern consisting of "fibrous" hematite with the c-axis of hematite particles aligned along the elongation direction of the hematite fibers. The individual fibers appear to be made of coalesced nano-particles of hematite arranged with their c-axis oriented radially to form a spherical structure. Lattice fringes suggest long-range order across particles and along fibers. According to interpretations of thermal emission spectra for Meridian Planum hematite, the absence of a band at approx. 390/cm implies a geometry where c-face emission dominates. Because the c-face is perpendicular to the c-axis, this is precisely the geometry for the Mauna Kea spherules because the c-axis is aligned parallel to their radial growth direction. Therefore, we conclude as a working hypothesis that the martian spherules also have radial, c-axis growth pattern on a scale that is too small to be detected by the MER MI. Furthermore, by analogy with the Mauna Kea spherules, the martian blueberries could have formed during hydrothermal alteration of

  8. Preparation and properties of highly c-axis-oriented Sr0.6Ba0.4Nb2O6 thin films by the sol-gel process

    NASA Astrophysics Data System (ADS)

    Shen, Zhiru; Ye, Hui; Zou, Tong; Guo, Bing

    2005-01-01

    Highly oriented ferroelectric strontium barium niobate (Sr0.6Ba0.4Nb2O6) thin films were prepared on P-type Si(100) substrate by the Sol-Gel process. The XRD patterns of the SBN films show that SBN film prepared by using NbCl5, KOH as raw materials performed a highly c-axis preferred orientation perpendicular to the Si substrate, better than films that was prepared using Nb(OC2H5)5 as starting agents. It may be duo to the existence of the potassium ion that not be filtered out completely during the preparation of the niobium alkoxide. The characteristics of D-F and C-V curves were obtained for SBN/Si film. The film exhibits high dielectric constant. In order to investigate ferroelectric characteristics further, the P-E loops of the SBN/Pt/Si were also measured. The films show better optical properties, transmittance of Sr0.6Ba0.4Nb2O6 films on MgO(001) and SiO2 substrates was more than 60% at the range from 450 to 850nm, refractive index was measured to be 2.14 and 2.12 on the MgO and SiO2 substrate at 633nm respectively.

  9. Orientational Alignment of Amyloidogenic Proteins in Pre-Aggregated Solutions

    NASA Astrophysics Data System (ADS)

    Schröder, C.; Steinhauser, O.; Sasisanker, P.; Weingärtner, H.

    2015-03-01

    In the present study we combine dielectric relaxation spectroscopy with generalized Born simulations to explore the role of orientational order for protein aggregation in solutions of bovine pancreatic insulin at various p H conditions. Under aggregation-prone conditions at low p H , insulin monomers prefer antiparallel dipole alignments, which are consistent with the orientation of the monomeric subunits in the dimer structure. This alignment is also true for two dimers, suggesting that already at moderate protein concentrations the species assemble in equilibrium clusters, in which the molecules adopt preferred orientations also found for the protomers of the corresponding oligomers.

  10. Oxygen incorporation in highly c -axis oriented YBa sub 2 Cu sub 3 O sub 7 minus x thin films deposited by plasma-enhanced metalorgainic chemical vapor deposition

    SciTech Connect

    Li, Y.Q.; Zhao, J.; Chern, C.S.; Lemoine, E.E.; Gallois, B.; Norris, P.; Kear, B. )

    1991-05-20

    YBa{sub 2}Cu{sub 3}O{sub 7{minus}{ital x}} superconducting thin films prepared by chemical vapor deposition which exhibit high transition temperatures ({ital T}{sub {ital c}}{similar to}90 K) and high critical current densities ({ital J}{sub {ital c}}{gt}10{sup 6} A/cm{sup 2} at 77.7 K and 0 T) generally have copper-rich precipitates on the surface. We have studied both near-stoichiometric and nonstoichiometric highly {ital c}-axis oriented thin films formed by plasma-enhanced metalorganic chemical vapor deposition. We show that the reduction in transport properties ({ital T}{sub {ital c}} and {ital J}{sub {ital c}}) observed in stoichiometric films with smooth morphologies may result from a dramatic reduction of the oxygen diffusion rate in these thin films as compared to nonstoichiometric films. The significant enhancement of the transport properties of these films was achieved by further oxygen anneals at 480 {degree}C.

  11. The impact of argon admixture on the c-axis oriented growth of direct current magnetron sputtered Sc{sub x}Al{sub 1−x}N thin films

    SciTech Connect

    Mayrhofer, P. M.; Bittner, A.; Schmid, U.; Eisenmenger-Sittner, C.; Stöger-Pollach, M.

    2014-05-21

    The piezoelectric properties of wurtzite aluminium nitride (w-AlN) are enhanced by alloying with scandium (Sc), thus offering superior properties for applications in micro electro-mechanical systems devices. Sc{sub x}Al{sub 1−x}N thin films have been prepared by DC reactive magnetron sputtering on Si (100) substrates from a single target. When targeting a concentration range from x = 0 up to x = 0.15, the preparation conditions have been optimized by varying the Ar/N{sub 2} ratio in the sputtering gas. To incorporate an increasing Sc concentration, a higher Ar/N{sub 2} ratio has to be applied during the deposition process. Hence, the argon concentration in the sputtering gas becomes a crucial parameter for microstructure-related parameters. To determine phase purity, degree of c-axis orientation, lattice parameter, and grain size, the Sc{sub x}Al{sub 1−x}N thin films were investigated by techniques, such as scanning electron microscopy, transmission electron microscopy, and X-ray diffraction.

  12. Orientation alignment of epitaxial LiCoO2 thin films on vicinal SrTiO3 (100) substrates

    NASA Astrophysics Data System (ADS)

    Nishio, Kazunori; Ohnishi, Tsuyoshi; Mitsuishi, Kazutaka; Ohta, Narumi; Watanabe, Ken; Takada, Kazunori

    2016-09-01

    LiCoO2 is epitaxially grown on SrTiO3 (100) substrates with (104) orientation. Because the LiCoO2 film is grown with its c-axis parallel to four equivalent <111> axes of the SrTiO3, the (104)-oriented film exhibits four-domain structure on the SrTiO3 (100) substrate. Introducing off-cut angle to the substrate surface breaks the equivalency between the four <111> axes of the SrTiO3 substrate to induce preferential growth of specific orientation with the c-axis in a descending direction of off-cut surface. Increasing off-cut angle and lowering deposition rate promote the preferential growth, because they facilitate step-flow growth mode, and finally align the c-axes in the domains completely into one <111> direction of the SrTiO3 substrate. The LiCoO2 film delivers a discharge capacity of 90 mAh g-1 at a low discharge rate of 0.01 C, and 25% of capacity is kept even at a high rate of discharge with 100 C.

  13. Molecular alignment and orientation with a hybrid Raman scattering technique

    NASA Astrophysics Data System (ADS)

    Bustard, Philip J.; Lausten, R.; Sussman, Benjamin J.

    2012-11-01

    We demonstrate a scheme for the preparation of molecular alignment and angular momentum orientation using a hybrid combination of two limits of Raman scattering. First a weak, impulsive pump pulse initializes the system via the nonresonant dynamic Stark effect. Then, having overcome the influence of the vacuum fluctuations, an amplification pulse selectively enhances the initial coherences by transient stimulated Raman scattering, generating alignment and angular momentum orientation of molecular hydrogen. The amplitude and phase of the resulting coherent dynamics are experimentally probed, indicating an amplification factor of 4.5. An analytic theory is developed to model the dynamics.

  14. Alignment and orientation in ion/endash/atom collisions

    SciTech Connect

    Kimura, M.; Lane, N.F.

    1987-01-01

    Recent progress in the theoretical study of alignment and orientation in atom-atom and ion-atom collisions at intermediate energies is reviewed. Recent systematic studies of the alignment and orientation of electronic charge cloud distributions of excited states resulting from such collisions clearly have provided more detailed information about the underlying collision dynamics. However, since accurate determination of these parameters is quite difficult, both theoretically and experimentally, a close collaboration between theory and experiment is necessary for a deeper understanding of the collision dynamics. A more complete approach, where the full density matrix is determined, is also discussed.

  15. Classroom EFL Writing: The Alignment-Oriented Approach

    ERIC Educational Resources Information Center

    Haiyan, Miao; Rilong, Liu

    2016-01-01

    This paper outlines the alignment-oriented approach in classroom EFL writing. Based on a review of the characteristics of the written language and comparison between the product-focused approach and the process-focused approach, the paper proposes a practical classroom procedure as to how to teach EFL writing. A follow-up empirical study is…

  16. The Shapes, Orientation, and Alignment of Galactic Dark Matter Subhalos

    NASA Astrophysics Data System (ADS)

    Kuhlen, Michael; Diemand, Jürg; Madau, Piero

    2007-12-01

    We present a study of the shapes, orientations, and alignments of Galactic dark matter subhalos in the Via Lactea simulation of a Milky Way-size ΛCDM host halo. Whereas isolated dark matter halos tend to be prolate, subhalos are predominantly triaxial. Overall subhalos are more spherical than the host halo, with minor-to-major and intermediate-to-major axis ratios of 0.68 and 0.83, respectively. Like isolated halos, subhalos tend to be less spherical in their central regions. The principal axis ratios are independent of subhalo mass when the shapes are measured within a physical scale such as rVmax, the radius of the peak of the circular velocity curve. Subhalos tend to be slightly more spherical closer to the host halo center. The spatial distribution of the subhalos traces the prolate shape of the host halo when they are selected by the largest Vmax they ever had, i.e., before they experienced strong tidal mass loss. The subhalos' orientation is not random: the major axis tends to align with the direction toward the host halo center. This alignment disappears for halos beyond 3r200 and is more pronounced when the shapes are measured in the outer regions of the subhalos. The radial alignment is preserved during a subhalo's orbit and they become elongated during pericenter passage, indicating that the alignment is likely caused by the host halo's tidal forces. These tidal interactions with the host halo act to make subhalos rounder over time.

  17. Alignment and defect structures in oriented phosphatidylcholine multilayers.

    PubMed Central

    Asher, S A; Pershan, P S

    1979-01-01

    The alignment of dilauryl-, dimyristoyl-, and dipalmitoylphosphatidylcholine at various water concentrations into large oriented monodomain multilayers by annealing at elevated temperatures (Powers and Clark, 1975, Proc. Natl. Acad. Sci. U.S.A. 72:840; Powers and Pershan. 1977. Biophys. J. 20:137) is accompanied by the formation and subsequent dissolution of various defect structures. Some of these defects appear similar to those observed in thermotropic and other lyotropic liquid crystals, reflecting the lamellar structure of these materials. The formation and evolution of defects during the alignment of the lipids into the defect-free, monodomain, multilamellar geometry is studied using polarized microscopy. A combination of polarized and dark-field microscopy facilitated characterization of the defects; specific structural models are proposed. A new alignment technique involving compression and dilation of the lipid, which effects sample alignment at temperatures that are lower than those required by the Powers technique, is described. Lower temperature alignment avoids thermal decomposition that will sometimes occur if the lipid is maintained at elevated temperatures for prolonged periods. With this technique, samples (80 micrometer thick) of dilaurylphosphatidylcholine with 20% water by weight were aligned at room temperature. Images FIGURE 3 FIGURE 4 FIGURE 5 FIGURE 6 FIGURE 7 FIGURE 8 FIGURE 9 FIGURE 10 FIGURE 11 FIGURE 12 FIGURE 13 FIGURE 14 FIGURE 15 PMID:263691

  18. Luminescence and dielectric properties of c-axis oriented (Bi1.90Eu0.10)(V1-zMoz)O5.5 ferroelectric thin films

    NASA Astrophysics Data System (ADS)

    Xie, Wei; Zou, Changwei; Xie, Mubiao; Bao, Dinghua

    2016-05-01

    (Bi1.90Eu0.10)(V1-zMoz)O5.5 (z = 0, 0.05, 0.10, 0.15 and 0.20) thin films with c-axis oriented were prepared on Pt(111)/Ti/SiO2/Si substrates by using chemical solution deposition method. The effect of Mo6+ concentration on the structure, luminescence properties and dielectric properties of the thin films were characterized systematically. X-ray diffraction data indicates that the thin films with low Mo6+-doping content can remain Bi2VO5.5 structure. When the Mo6+-doping content z reaches to 0.15, the thin films are a mixture of diphase with the main phase Bi2VO5.5 and secondary phase Bi2MoO6. Under UV irradiation, all the thin films emit a bright red or orange emission which origin from Eu3+. With increasing Mo6+-doping content z, the relative intensity of the Red and Orange emissions show obviously change. The value of Red/Orange ratio first decrease, and it reached minimum when z is 0.15, then it recover to the initial value. The variation trend of the Red/Orange ratio reflects the change of the lattice symmetry. Dielectric constant of the thin films increased with the increasing of the Mo6+ concentration while dielectric loss decreased. The decrease of the quantities of oxygen vacancies and the generation of Bi2MoO6 phase are responsible for the improvement of electric properties. These results explain that Eu3+ion can be used as an effective luminescent probe in (Bi1.90Eu0.10)(V1-zMoz)O5.5 (z = 0, 0.05, 0.10, 0.15 and 0.20) thin films, and the electric properties of the thin films can be improved by Mo6+ doping.

  19. A study of the temperature dependence of the local ferroelectric properties of c-axis oriented Bi6Ti3Fe2O18 Aurivillius phase thin films: Illustrating the potential of a novel lead-free perovskite material for high density memory applications

    NASA Astrophysics Data System (ADS)

    Faraz, Ahmad; Deepak, Nitin; Schmidt, Michael; Pemble, Martyn E.; Keeney, Lynette

    2015-08-01

    The ability to control the growth, texture and orientation of self-nanostructured lead-free Aurivillius phase thin films can in principle, greatly improve their ferroelectric properties, since in these materials the polarization direction is dependent on crystallite orientation. Here, we report the growth of c-plane oriented Bi6Ti3Fe2O18 (B6TFO) functional oxide Aurivillius phase thin films on c-plane sapphire substrates by liquid injection chemical vapour deposition (LI-CVD). Microstructural analysis reveals that B6TFO thin films annealed at 850°C are highly crystalline, well textured (Lotgering factor of 0.962) and single phase. Typical Aurivillius plate-like morphology with an average film thickness of 110nm and roughness 24nm was observed. The potential of B6TFO for use as a material in lead-free piezoelectric and ferroelectric data storage applications was explored by investigating local electromechanical (piezoelectric) and ferroelectric properties at the nano-scale. Vertical and lateral piezoresponse force microscopy (PFM) reveals stronger in-plane polarization due to the controlled growth of the a-axis oriented grains lying in the plane of the B6TFO films. Switching spectroscopy PFM (SS-PFM) hysteresis loops obtained at higher temperatures (up to 200°C) and at room temperature reveal a clear ferroelectric signature with only minor changes in piezoresponse observed with increasing temperature. Ferroelectric domain patterns were written at 200°C using PFM lithography. Hysteresis loops generated inside the poled regions at room and higher temperatures show a significant increase in piezoresponse due to alignment of the c-axis polarization components under the external electric field. No observable change in written domain patterns was observed after 20hrs of PFM scanning at 200°C, confirming that B6TFO retains polarization over this finite period of time. These studies demonstrate the potential of B6TFO thin films for use in piezoelectric applications at

  20. Orientation, alignment, and polytype control in epitaxial growth of SiC nanowires for electronics application in harsh environments

    NASA Astrophysics Data System (ADS)

    Koshka, Yaroslav; Thirumalai, Rooban Venkatesh K. G.; Krishnan, Bharat K.; Levin, Igor; Merrett, J. Neil; Davydov, Albert V.

    2013-09-01

    SiC nanowires (NWs) are attractive building blocks for the next generation electronic devices since silicon carbide is a wide bandgap semiconductor with high electrical breakdown strength, radiation resistance, mechanical strength, thermal conductivity, chemical stability and biocompatibility. Epitaxial growth using metal-catalyst-based vapor-liquid-solid mechanism was employed for SiC NW growth in this work. 4H-SiC substrates having different crystallographic orientations were used in order to control NW alignment and polytype. A new technique based on vapor-phase delivery of the metal catalyst was developed to facilitate control of the NW density. Both 4H and 3C polytypes with a strong stacking disorder were obtained. The 4H and 3C NWs had different orientations with respect to the substrate. 4H NWs grew perpendicular to the c-plane of the substrate. The stacking faults (SFs) in these nanowires were perpendicular to the [0001] nanowire axes. All 3C NWs grew at 20° with respect to the substrate c-plane, and their projections on the c-plane corresponded to one of the six equivalent ⟨101-0⟩ crystallographic directions. All six orientations were obtained simultaneously when growing NWs on the (0001) substrate surface, while only one or two NW orientations were observed when growing NWs on any particular crystallographic plane parallel to the c-axis of the substrate. Growth on {101-0} surfaces resulted in only one NW orientation, thereby producing well-aligned NW arrays. Preliminary measurements of the NW electrical conductivity are reported utilizing two-terminal device geometry.

  1. Co-Orientation: Quantifying Simultaneous Co-Localization and Orientational Alignment of Filaments in Light Microscopy

    PubMed Central

    Manders, Erik M. M.; Jalink, Kees; Stallinga, Sjoerd; Rieger, Bernd

    2015-01-01

    Co-localization analysis is a widely used tool to seek evidence for functional interactions between molecules in different color channels in microscopic images. Here we extend the basic co-localization analysis by including the orientations of the structures on which the molecules reside. We refer to the combination of co-localization of molecules and orientational alignment of the structures on which they reside as co-orientation. Because the orientation varies with the length scale at which it is evaluated, we consider this scale as a separate informative dimension in the analysis. Additionally we introduce a data driven method for testing the statistical significance of the co-orientation and provide a method for visualizing the local co-orientation strength in images. We demonstrate our methods on simulated localization microscopy data of filamentous structures, as well as experimental images of similar structures acquired with localization microscopy in different color channels. We also show that in cultured primary HUVEC endothelial cells, filaments of the intermediate filament vimentin run close to and parallel with microtubuli. In contrast, no co-orientation was found between keratin and actin filaments. Co-orientation between vimentin and tubulin was also observed in an endothelial cell line, albeit to a lesser extent, but not in 3T3 fibroblasts. These data therefore suggest that microtubuli functionally interact with the vimentin network in a cell-type specific manner. PMID:26161965

  2. Orientation and alignment effects in electron-induced ionization of a single oriented water molecule

    SciTech Connect

    Champion, C.; Rivarola, R. D.

    2010-10-15

    We here report a theoretical study about the orientation effect on the total ionization cross sections for a single oriented water molecule. The theoretical description of the ionization process is performed within the first Born framework with a collisional system including an initial state composed of a projectile and a water target molecule described by a plane wave and an accurate one-center molecular wave function, respectively, and a final state constituted by a slow ejected electron represented by a Coulomb wave and a scattered (fast) electron projectile described by a plane wave. Secondary electron energetic distributions as well as total cross sections are then compared for particular target configurations pointing out strong alignment and orientation effects on the description of the ionization process.

  3. Temporal Effects of Alignment in Text-Based, Task-Oriented Discourse

    ERIC Educational Resources Information Center

    Foltz, Anouschka; Gaspers, Judith; Meyer, Carolin; Thiele, Kristina; Cimiano, Philipp; Stenneken, Prisca

    2015-01-01

    Communicative alignment refers to adaptation to one's communication partner. Temporal aspects of such alignment have been little explored. This article examines temporal aspects of lexical and syntactic alignment (i.e., tendencies to use the interlocutor's lexical items and syntactic structures) in task-oriented discourse. In particular, we…

  4. Orthogonally oriented scaffolds with aligned fibers for engineering intestinal smooth muscle

    PubMed Central

    Kobayashi, Masae; Lei, Nan Ye; Wang, Qianqian; Wu, Benjamin M.; Dunn, James C.Y.

    2015-01-01

    Controlling cellular alignment is critical in engineering intestines with desired structure and function. Although previous studies have examined the directional alignment of cells on the surface (x-y plane) of parallel fibers, quantitative analysis of the cellular alignment inside implanted scaffolds with oriented fibers has not been reported. This study examined the cellular alignment in the x-z and y-z planes of scaffolds made with two layers of orthogonally oriented fibers. The cellular orientation inside implanted scaffolds was evaluated with immunofluorescence. Quantitative analysis of coherency between cell orientation and fiber direction confirmed that cells aligned along the fibers not only on the surface (x-y plane) but also inside the scaffolds (x-z & y-z planes). Our study demonstrated that two layers of orthogonally aligned scaffolds can generate the histological organization of cells similar to that of intestinal circular and longitudinal smooth muscle. PMID:26001072

  5. Synthesis and orientation of barium hexaferrite ceramics by magnetic alignment

    NASA Astrophysics Data System (ADS)

    Autissier, Denis

    1990-01-01

    Particles of Ba 2Mn xZn 2- xFe 12O 22 with planar structure were prepared by chemical precipitation. They were processed by sleep casting in presence of a magnetic field. The degree of alignment was improved by a special sintering treatment. By this procedure an alignment as high as 99.9% is obtained.

  6. Fabrication of c-axis Oriented Epitaxial EuBa2Cu3O7-δ and EuBa2Cu4O8 Films on SrTiO3 (100) Substrate by Molten Hydroxide Method at 450°C

    NASA Astrophysics Data System (ADS)

    Miyachi, Y.; Funaki, S.; Yamada, Y.

    EuBa2Cu3O7-δ (Eu123) and EuBa2Cu4O8 (Eu124) films oriented in c-axis were deposited on SrTiO3 (100) substrates with eutectic NaOH-KOH flux at 450 °C. Synthesized phase has changed by using various types of barium source materials. Pure Eu124 films showed superconducting transition at ∼70 K, zero-resistance was not observed for Eu123/124 two-phase films. One of the possible reasons of this is Eu/Ba substitution of Eu123 phase. According to Tc of the Eu124, the molten hydroxide method enables to deposit high-quality Eu124 films.

  7. Vortex-aligned fullerene nanowhiskers as a scaffold for orienting cell growth.

    PubMed

    Krishnan, Venkata; Kasuya, Yuki; Ji, Qingmin; Sathish, Marappan; Shrestha, Lok Kumar; Ishihara, Shinsuke; Minami, Kosuke; Morita, Hiromi; Yamazaki, Tomohiko; Hanagata, Nobutaka; Miyazawa, Kun'ichi; Acharya, Somobrata; Nakanishi, Waka; Hill, Jonathan P; Ariga, Katsuhiko

    2015-07-22

    A versatile method for the rapid fabrication of aligned fullerene C60 nanowhiskers (C60NWs) at the air-water interface is presented. This method is based on the vortex motion of a subphase (water), which directs floating C60NWs to align on the water surface according to the direction of rotational flow. Aligned C60NWs could be transferred onto many different flat substrates, and, in this case, aligned C60NWs on glass substrates were employed as a scaffold for cell culture. Bone forming human osteoblast MG63 cells adhered well to the C60NWs, and their growth was found to be oriented with the axis of the aligned C60NWs. Cells grown on aligned C60NWs were more highly oriented with the axis of alignment than when grown on randomly oriented nanowhiskers. A study of cell proliferation on the C60NWs revealed their low toxicity, indicating their potential for use in biomedical applications. PMID:26115554

  8. Electrospinning of unidirectionally and orthogonally aligned thermoplastic polyurethane nanofibers: fiber orientation and cell migration.

    PubMed

    Mi, Hao-Yang; Salick, Max R; Jing, Xin; Crone, Wendy C; Peng, Xiang-Fang; Turng, Lih-Sheng

    2015-02-01

    Unidirectionally and orthogonally aligned thermoplastic polyurethane (TPU) nanofibers were electrospun using a custom-built electrospinning device. The unidirectionally aligned fibers were collected using two parallel copper plates, and the orthogonally aligned fibers were collected using two orthogonal sets of parallel copper plates with alternate negative connections. Carbon nanotubes (CNT) and polyacrylic acid (PAA) were added to modify the polymer solution. It was found that both CNT and PAA were capable of increasing solution conductivity. The TPU/PAA fiber showed the highest degree of fiber orientation with more than 90% of the fibers having an orientation angle between -10° and 10° for unidirectionally aligned fibers, and for orthogonally aligned fibers, the orientation angle of 50% fibers located between -10° and 10° and 48% fibers located between 80° and 100°. Viability assessment of 3T3 fibroblasts cultured on TPU/PAA fibers suggested that the material was cytocompatible. The cells' orientation and migration direction closely matched the fibers' orientation. The cell migration velocity and distance were both enhanced with the guidance of fibers compared with cells cultured on random fibers and common tissue culture plastic. Controlling cell migration velocity and directionality may provide ways to influence differentiation and gene expression and systems that would allow further exploration of wound repair and metastatic cell behavior. PMID:24771704

  9. Electrospinning of unidirectionally and orthogonally aligned thermoplastic polyurethane nanofibers: Fiber orientation and cell migration

    PubMed Central

    Mi, Hao-Yang; Salick, Max R.; Jing, Xin; Crone, Wendy C.; Peng, Xiang-Fang; Turng, Lih-Sheng

    2015-01-01

    Unidirectionally and orthogonally aligned thermoplastic polyurethane (TPU) nanofibers were electrospun using a custom-built electrospinning device. The unidirectionally aligned fibers were collected using two parallel copper plates, and the orthogonally aligned fibers were collected using two orthogonal sets of parallel copper plates with alternate negative connections. Carbon nanotubes (CNT) and polyacrylic acid (PAA) were added to modify the polymer solution. It was found that both CNT and PAA were capable of increasing solution conductivity. The TPU/PAA fiber showed the highest degree of fiber orientation with more than 90% of the fibers having an orientation angle between −10° and 10° for unidirectionally aligned fibers, and for orthogonally aligned fibers, the orientation angle of 50% fibers located between −10° and 10° and 48% fibers located between 80° and 100°. Viability assessment of 3T3 fibroblasts cultured on TPU/PAA fibers suggested that the material was cytocompatible. The cells’ orientation and migration direction closely matched the fibers’ orientation. The cell migration velocity and distance were both enhanced with the guidance of fibers compared with cells cultured on random fibers and common tissue culture plastic. Controlling cell migration velocity and directionality may provide ways to influence differentiation and gene expression and systems that would allow further exploration of wound repair and metastatic cell behavior. PMID:24771704

  10. Magnetically Aligned Bicelles to Study the Orientation of Lipophilic Ligands in Membrane Bilayers

    PubMed Central

    Guo, Jianxin; Yang, De-Ping; Chari, Ravi; Tian, Xiaoyu; Pavlopoulos, Spiro; Lu, Dai; Makriyannis, Alexandros

    2013-01-01

    Magnetically aligned bicelles were used as a model membrane to study the orientation and dynamic properties of two cannabinoids (Δ8-THC and Me-Δ8-THC) using 31P- and 2H-NMR. The uniform alignment of the bicelles allowed us to obtain well resolved deuterium spectra from a solution NMR spectrometer. The preferred orientations of Δ8-THC and Me-Δ8-THC were calculated based on the measurements of individual quadrupolar splittings. Our results agree with previous experiments using multilamellar membranes as well as with molecular dynamics simulation data described here. In conjunction with our earlier report using small and fast tumbling bicelles, the present work of well aligned bicelles shows that bicelle preparations can provide either pseudo-isotropic or anisotropic NMR spectra to study the conformation, orientation and dynamic properties of ligands in membrane bilayers. Such data are of critical value for understanding the interactions of lipophilic drug molecules with membrane proteins. PMID:18834109

  11. Mechanisms of liquid crystal and biopolymer alignment on highly-oriented polymer thin films

    NASA Astrophysics Data System (ADS)

    Dennis, John Raymond

    1998-12-01

    Molecular order can strongly enhance material properties, or produce materials which perform advanced functions. Many materials, from small crystals to large macromolecules, may be aligned on highly-oriented poly(tetrafluoroethylene) (PTFE) or high-density polyethylene (HDPE) thin films, prepared by a simple shear deposition procedure. Here, processes by which these films produce order are examined, first in a well- characterized liquid crystal, then in two more complex polymer liquid crystals, and finally in an adsorbed motor protein system. Optical second harmonic generation (SHG) was used to study surface molecular order in the liquid crystal 4'-n-octyl-4-cyano-biphenyl (8CB) on PTFE and HDPE films. In nematic 8CB cells with bulk alignment along the polymer orientation axis, the surface monolayers of 8CB were also aligned, and showed C2ν symmetry. In the isotropic phase, the surface monolayer alignment was lost. Monolayers of 8CB evaporated onto either polymer showed little or no alignment. The bulk 8CB alignment appears to be primarily caused by surface ridges through an elastic, bulk- mediated mechanism, unlike the epitaxy-like alignment found on some cloth-rubbed polymer surfaces. For the polymer liquid crystal poly-γ-benzyl- glutamate (PBG), uniform homogeneous surface alignment was observed on PTFE films; this is the first report of PBG surface alignment. However, liquid crystalline samples of microtubules were not aligned. PTFE films show promise for aligning some other polymer liquid crystals via elastic interactions. The motor protein kinesin, adsorbed to PTFE films, transported fluorescently labeled microtubules predominantly in straight lines along the films' orientation axis, not in random directions as observed on glass surfaces. As the kinesin surface density was increased, the degree of alignment peaked and then declined. The results indicate that directed motion occurs because active kinesin preferentially adsorbs to surface sites along linear

  12. Dead-zone-free atomic magnetometry with simultaneous excitation of orientation and alignment resonances.

    PubMed

    Ben-Kish, A; Romalis, M V

    2010-11-01

    Atomic magnetometers have very high absolute precision and sensitivity to magnetic fields but suffer from a fundamental problem: the vectorial or tensorial interaction of light with atoms leads to "dead zones," certain orientations of the magnetic field where the magnetometer loses its sensitivity. We demonstrate a simple polarization modulation scheme that simultaneously creates coherent population trapping (CPT) in orientation and alignment, thereby eliminating dead zones. Using 87Rb in a 10 Torr buffer gas cell we measure narrow, high-contrast CPT transparency peaks for all orientations and also show the absence of systematic effects associated with nonlinear Zeeman splitting. PMID:21231166

  13. Anisotropic light absorption, refractive indices, and orientational order parameter of unidirectionally aligned columnar liquid crystal films.

    PubMed

    Charlet, Emilie; Grelet, Eric

    2008-10-01

    The anisotropic optical properties of thermotropic columnar liquid crystals absorbing in the visible range are investigated for different discotic compounds unidirectionally oriented in open supported thin films. Two methods to monitor the alignment of columnar mesophases in thin films are reported, making possible to achieve either homeotropic anchoring (columns normal to the substrate) by a specific thermal annealing, or unidirectional planar orientation (columns parallel to the substrate) by using a rubbed Teflon coating. The columnar liquid crystal anchoring is found to depend on the nature of the compound, either parallel or perpendicular to the Teflon orientation. Based on this control of the mesophase alignment, the dichroic ratio and the orientational order parameter of oriented samples are measured, and a high order parameter of 0.9 is found in the case of parallel alignment. From the polarized absorption data of the columnar liquid crystal films, the light wavelength dependence of the birefringence and of the real and imaginary parts (refractive index and extinction coefficient, respectively) of the anisotropic optical indices are determined over the whole visible range. PMID:18999445

  14. Guided orientation of cardiomyocytes on electrospun aligned nanofibers for cardiac tissue engineering.

    PubMed

    Kai, Dan; Prabhakaran, Molamma P; Jin, Guorui; Ramakrishna, Seeram

    2011-08-01

    Cardiac tissue engineering (TE) is one of the most promising strategies to reconstruct the infarct myocardium and the major challenge involves producing a bioactive scaffold with anisotropic properties that assist in cell guidance to mimic the heart tissue. In this study, random and aligned poly(ε-caprolactone)/gelatin (PG) composite nanofibrous scaffolds were electrospun to structurally mimic the oriented extracellular matrix (ECM). Morphological, chemical and mechanical properties of the electrospun PG nanofibers were evaluated by scanning electron microscopy (SEM), water contact angle, attenuated total reflectance Fourier transform infrared spectroscopy and tensile measurements. Results indicated that PG nanofibrous scaffolds possessed smaller fiber diameters (239 ± 37 nm for random fibers and 269 ± 33 nm for aligned fibers), increased hydrophilicity, and lower stiffness compared to electrospun PCL nanofibers. The aligned PG nanofibers showed anisotropic wetting characteristics and mechanical properties, which closely match the requirements of native cardiac anisotropy. Rabbit cardiomyocytes were cultured on electrospun random and aligned nanofibers to assess the biocompatibility of scaffolds, together with its potential for cell guidance. The SEM and immunocytochemical analysis showed that the aligned PG scaffold greatly promoted cell attachment and alignment because of the biological components and ordered topography of the scaffolds. Moreover, we concluded that the aligned PG nanofibrous scaffolds could be more promising substrates suitable for the regeneration of infarct myocardium and other cardiac defects. PMID:21681953

  15. Mapping local orientation of aligned fibrous scatterers for cancerous tissues using backscattering Mueller matrix imaging

    NASA Astrophysics Data System (ADS)

    He, Honghui; Sun, Minghao; Zeng, Nan; Du, E.; Liu, Shaoxiong; Guo, Yihong; Wu, Jian; He, Yonghong; Ma, Hui

    2014-10-01

    Polarization measurements are sensitive to the microstructure of tissues and can be used to detect pathological changes. Many tissues contain anisotropic fibrous structures. We obtain the local orientation of aligned fibrous scatterers using different groups of the backscattering Mueller matrix elements. Experiments on concentrically well-aligned silk fibers and unstained human papillary thyroid carcinoma tissues show that the m22, m33, m23, and m32 elements have better contrast but higher degeneracy for the extraction of orientation angles. The m12 and m13 elements show lower contrast, but allow us to determine the orientation angle for the fibrous scatterers along all directions. Moreover, Monte Carlo simulations based on the sphere-cylinder scattering model indicate that the oblique incidence of the illumination beam introduces some errors in the orientation angles obtained by both methods. Mapping the local orientation of anisotropic tissues may not only provide information on pathological changes, but can also give new leads to reduce the orientation dependence of polarization measurements.

  16. Evaluation of Eight Methods for Aligning Orientation of Two Coordinate Systems.

    PubMed

    Mecheri, Hakim; Robert-Lachaine, Xavier; Larue, Christian; Plamondon, André

    2016-08-01

    The aim of this study was to evaluate eight methods for aligning the orientation of two different local coordinate systems. Alignment is very important when combining two different systems of motion analysis. Two of the methods were developed specifically for biomechanical studies, and because there have been at least three decades of algorithm development in robotics, it was decided to include six methods from this field. To compare these methods, an Xsens sensor and two Optotrak clusters were attached to a Plexiglas plate. The first optical marker cluster was fixed on the sensor and 20 trials were recorded. The error of alignment was calculated for each trial, and the mean, the standard deviation, and the maximum values of this error over all trials were reported. One-way repeated measures analysis of variance revealed that the alignment error differed significantly across the eight methods. Post-hoc tests showed that the alignment error from the methods based on angular velocities was significantly lower than for the other methods. The method using angular velocities performed the best, with an average error of 0.17 ± 0.08 deg. We therefore recommend this method, which is easy to perform and provides accurate alignment. PMID:27245737

  17. Aligned platinum nanowire networks from surface-oriented lipid cubic phase templates

    NASA Astrophysics Data System (ADS)

    Richardson, S. J.; Burton, M. R.; Staniec, P. A.; Nandhakumar, I. S.; Terrill, N. J.; Elliott, J. M.; Squires, A. M.

    2016-01-01

    Mesoporous metal structures featuring a bicontinuous cubic morphology have a wide range of potential applications and novel opto-electronic properties, often orientation-dependent. We describe the production of nanostructured metal films 1-2 microns thick featuring 3D-periodic `single diamond' morphology that show high out-of-plane alignment, with the (111) plane oriented parallel to the substrate. These are produced by electrodeposition of platinum through a lipid cubic phase (QII) template. Further investigation into the mechanism for the orientation revealed the surprising result that the QII template, which is tens of microns thick, is polydomain with no overall orientation. When thicker platinum films are grown, they also show increased orientational disorder. These results suggest that polydomain QII samples display a region of uniaxial orientation at the lipid/substrate interface up to approximately 2.8 +/- 0.3 μm away from the solid surface. Our approach gives previously unavailable information on the arrangement of cubic phases at solid interfaces, which is important for many applications of QII phases. Most significantly, we have produced a previously unreported class of oriented nanomaterial, with potential applications including metamaterials and lithographic masks.Mesoporous metal structures featuring a bicontinuous cubic morphology have a wide range of potential applications and novel opto-electronic properties, often orientation-dependent. We describe the production of nanostructured metal films 1-2 microns thick featuring 3D-periodic `single diamond' morphology that show high out-of-plane alignment, with the (111) plane oriented parallel to the substrate. These are produced by electrodeposition of platinum through a lipid cubic phase (QII) template. Further investigation into the mechanism for the orientation revealed the surprising result that the QII template, which is tens of microns thick, is polydomain with no overall orientation. When thicker

  18. Alignment of crystal orientations of the multi-domain photonic crystals in Parides sesostris wing scales.

    PubMed

    Yoshioka, S; Fujita, H; Kinoshita, S; Matsuhana, B

    2014-03-01

    It is known that the wing scales of the emerald-patched cattleheart butterfly, Parides sesostris, contain gyroid-type photonic crystals, which produce a green structural colour. However, the photonic crystal is not a single crystal that spreads over the entire scale, but it is separated into many small domains with different crystal orientations. As a photonic crystal generally has band gaps at different frequencies depending on the direction of light propagation, it seems mysterious that the scale is observed to be uniformly green under an optical microscope despite the multi-domain structure. In this study, we have carefully investigated the structure of the wing scale and discovered that the crystal orientations of different domains are not perfectly random, but there is a preferred crystal orientation that is aligned along the surface normal of the scale. This finding suggests that there is an additional factor during the developmental process of the microstructure that regulates the crystal orientation. PMID:24352678

  19. Alignment of crystal orientations of the multi-domain photonic crystals in Parides sesostris wing scales

    PubMed Central

    Yoshioka, S.; Fujita, H.; Kinoshita, S.; Matsuhana, B.

    2014-01-01

    It is known that the wing scales of the emerald-patched cattleheart butterfly, Parides sesostris, contain gyroid-type photonic crystals, which produce a green structural colour. However, the photonic crystal is not a single crystal that spreads over the entire scale, but it is separated into many small domains with different crystal orientations. As a photonic crystal generally has band gaps at different frequencies depending on the direction of light propagation, it seems mysterious that the scale is observed to be uniformly green under an optical microscope despite the multi-domain structure. In this study, we have carefully investigated the structure of the wing scale and discovered that the crystal orientations of different domains are not perfectly random, but there is a preferred crystal orientation that is aligned along the surface normal of the scale. This finding suggests that there is an additional factor during the developmental process of the microstructure that regulates the crystal orientation. PMID:24352678

  20. Transient molecular orientation and rheology in flow aligning thermotropic liquid crystalline polymers

    SciTech Connect

    Ugaz, Victor M.; Burghardt, Wesley R.; Zhou, Weijun; Kornfield, Julia A.

    2001-09-01

    Quantitative measurements of molecular orientation and rheology are reported for various transient shear flows of a nematic semiflexible copolyether. Unlike the case of lyotropic liquid crystalline polymers (LCPs), whose structure and rheology in shear are dominated by director tumbling, this material exhibits flow aligning behavior. The observed behavior is quite similar to that seen in a copolyester that we have recently studied [Ugaz and Burghardt (1998)], suggesting that flow aligning dynamics may predominate in main-chain thermotropes that incorporate significant chain flexibility. Since the flow aligning regime has received little attention in previous attempts to model the rheology of textured, polydomain LCPs, we attempt to determine whether available models are capable of predicting the orientation and stress response of this class of LCP. We first examine the predictions of the polydomain Ericksen model, an adaptation of Ericksen's transversely isotropic fluid model which accounts for the polydomain distribution of director orientation while neglecting distortional elasticity. This simple model captures a number of qualitative and quantitative features associated with the evolution of orientation and stress during shear flow inception, but cannot cope with reversing flows. To consider the possible role of distortional elasticity in the re-orientation dynamics upon reversal, we evaluate the mesoscopically averaged domain theory of Larson and Doi [Larson and Doi (1991)], which incorporates a phenomenological description of distortional elastic effects. To date, their approach to account for polydomain structure has only been applied to describe tumbling LCPs. We find that it captures the qualitative transient orientation response to flow reversals, but is less successful in describing the evolution of stresses. This is linked to the decoupling approximation adopted during the model's development. Finally, a modified polydomain Ericksen model is introduced

  1. Tubular Hydrogels of Circumferentially Aligned Nanofibers to Encapsulate and Orient Vascular Cells

    PubMed Central

    McClendon, Mark T.; Stupp, Samuel I.

    2012-01-01

    There is a great clinical need for tissue engineered blood vessels that could be used to replace or bypass damaged arteries. The success of such grafts will depend strongly on their ability to mimic the cellular and matrix organization found in native arteries, but currently available cell scaffolds such as electrospun fibers or hydrogels lack the ability to simultaneously encapsulate and align cells. Our laboratory has recently developed liquid crystalline solutions of peptide amphiphile nanofibers that form aligned domains at exceedingly low concentrations (<1wt%), and can be trapped as gels with macroscopic alignment using low shear rates and ionic crosslinking. We describe here the use of these systems to fabricate tubes with macroscopic circumferential alignment and demonstrate their potential as arterial cell scaffolds. The nanofibers in these tubes were circumferentially aligned by applying small amounts of shear in a custom built flow chamber prior to gelation. Small angle X-ray scattering confirmed that the direction of nanofiber alignment was the same as the direction of shear flow. We also show the encapsulation of smooth muscle cells during the fabrication process without compromising cell viability. After two days in culture the encapsulated cells oriented their long axis in the direction of nanofiber alignment thus mimicking the circumferential alignment seen in native arteries. Cell density roughly doubled after 12 days demonstrating the scaffold’s ability to facilitate necessary graft maturation. Since these nanofiber gels are composed of >99% water by weight, the cells have abundant room for proliferation and remodeling. In contrast to previously reported arterial cell scaffolds, this new material can encapsulate cells and direct cellular organization without the requirement of external stimuli or gel compaction. PMID:22591610

  2. Object oriented software for simulation and reconstruction of big alignment systems

    NASA Astrophysics Data System (ADS)

    Arce, P.

    2003-04-01

    Modern high-energy physics experiments require tracking detectors to provide high precision under difficult working conditions (high magnetic field, gravity loads and temperature gradients). This is the reason why several of them are deciding to implement optical alignment systems to monitor the displacement of tracking elements in operation. To simulate and reconstruct optical alignment systems a general purpose software, named COCOA, has been developed, using the object oriented paradigm and software engineering techniques. Thanks to the big flexibility in its design, COCOA is able to reconstruct any optical system made of a combination of the following objects: laser, x-hair laser, incoherent source—pinhole, lens, mirror, plate splitter, cube splitter, optical square, rhomboid prism, 2D sensor, 1D sensor, distance-meter, tilt-meter, user-defined. COCOA was designed to satisfy the requirements of the CMS alignment system, which has several thousands of components. Sparse matrix techniques had been investigated for solving non-linear least squares fits with such a big number of parameters. The soundness of COCOA has already been stressed in the reconstruction of the data of a full simulation of a quarter plane of the CMS muon alignment system, which implied solving a system of 900 equations with 850 unknown parameters. Full simulation of the whole CMS alignment system, with over 30,000 parameters, is quite advanced. The integration of COCOA in the CMS software framework is also under progress.

  3. Guiding the orientation of smooth muscle cells on random and aligned polyurethane/collagen nanofibers.

    PubMed

    Jia, Lin; Prabhakaran, Molamma P; Qin, Xiaohong; Ramakrishna, Seeram

    2014-09-01

    Fabricating scaffolds that can simulate the architecture and functionality of native extracellular matrix is a huge challenge in vascular tissue engineering. Various kinds of materials are engineered via nano-technological approaches to meet the current challenges in vascular tissue regeneration. During this study, nanofibers from pure polyurethane and hybrid polyurethane/collagen in two different morphologies (random and aligned) and in three different ratios of polyurethane:collagen (75:25; 50:50; 25:75) are fabricated by electrospinning. The fiber diameters of the nanofibrous scaffolds are in the range of 174-453 nm and 145-419 for random and aligned fibers, respectively, where they closely mimic the nanoscale dimensions of native extracellular matrix. The aligned polyurethane/collagen nanofibers expressed anisotropic wettability with mechanical properties which is suitable for regeneration of the artery. After 12 days of human aortic smooth muscle cells culture on different scaffolds, the proliferation of smooth muscle cells on hybrid polyurethane/collagen (3:1) nanofibers was 173% and 212% higher than on pure polyurethane scaffolds for random and aligned scaffolds, respectively. The results of cell morphology and protein staining showed that the aligned polyurethane/collagen (3:1) scaffold promote smooth muscle cells alignment through contact guidance, while the random polyurethane/collagen (3:1) also guided cell orientation most probably due to the inherent biochemical composition. Our studies demonstrate the potential of aligned and random polyurethane/collagen (3:1) as promising substrates for vascular tissue regeneration. PMID:24682037

  4. Measurement of orientation and alignment moment relaxation by polarization spectroscopy: theory and experiment.

    PubMed

    Costen, Matthew L; Crichton, Hilary J; McKendrick, Kenneth G

    2004-05-01

    A diagrammatic perturbation theory description of one-color polarization spectroscopy (PS) is developed which emphasizes the significance of orientation and alignment tensor moments of the rotational angular momentum, and their collisional evolution. The influences of Doppler motion, velocity-changing collisions, decay of population, orientation and alignment, and nuclear hyperfine depolarization on the calculated PS signal are discussed. Illustrative simulations are presented of the evolution of the PS signal as a function of pump-probe laser delay. These are generated by a Monte Carlo integration of the derived equations for the signal electric field over typical experimental pump and probe laser temporal profiles and velocity distributions for a commonly studied system, the OH A 2Sigma+ -X 2Pi (0,0) band. These predictions are compared with a preliminary set of results obtained in an experimental apparatus designed for one-color polarization spectroscopy using independent pump and probe lasers. Measurements are presented using linearly polarized pump light on the Q1(2.5) transition of the OH A 2Sigma+ -X 2Pi (0,0) band with He as the collision partner. The decay of the experimental PS pump-probe signal is discussed with reference to inelastic collisional population transfer rates in the literature. It is concluded that the collisional depolarization of rotational alignment is rapid, with a rate approximately twice that of population transfer. This is consistent with previous measurements in atmospheric pressure flames. PS is shown to be a viable novel spectroscopic method for determining rotational angular momentum orientation and alignment relaxation rates, which are valuable quantities because they are sensitive probes of the forces involved in inelastic collisions. PMID:15267706

  5. Lineation-parallel c-axis Fabric of Quartz Formed Under Water-rich Conditions

    NASA Astrophysics Data System (ADS)

    Wang, Y.; Zhang, J.; Li, P.

    2014-12-01

    The crystallographic preferred orientation (CPO) of quartz is of great significance because it records much valuable information pertinent to the deformation of quartz-rich rocks in the continental crust. The lineation-parallel c-axis CPO (i.e., c-axis forming a maximum parallel to the lineation) in naturally deformed quartz is generally considered to form under high temperature (> ~550 ºC) conditions. However, most laboratory deformation experiments on quartzite failed to produce such a CPO at high temperatures up to 1200 ºC. Here we reported a new occurrence of the lineation-parallel c-axis CPO of quartz from kyanite-quartz veins in eclogite. Optical microstructural observations, fourier transform infrared (FTIR) and electron backscattered diffraction (EBSD) techniques were integrated to illuminate the nature of quartz CPOs. Quartz exhibits mostly straight to slightly curved grain boundaries, modest intracrystalline plasticity, and significant shape preferred orientation (SPO) and CPOs, indicating dislocation creep dominated the deformation of quartz. Kyanite grains in the veins are mostly strain-free, suggestive of their higher strength than quartz. The pronounced SPO and CPOs in kyanite were interpreted to originate from anisotropic crystal growth and/or mechanical rotation during vein-parallel shearing. FTIR results show quartz contains a trivial amount of structurally bound water (several tens of H/106 Si), while kyanite has a water content of 384-729 H/106 Si; however, petrographic observations suggest quartz from the veins were practically deformed under water-rich conditions. We argue that the observed lineation-parallel c-axis fabric in quartz was inherited from preexisting CPOs as a result of anisotropic grain growth under stress facilitated by water, but rather than due to a dominant c-slip. The preservation of the quartz CPOs probably benefited from the preexisting quartz CPOs which renders most quartz grains unsuitably oriented for an easy a-slip at

  6. Pulsed laser deposition of c-axis untilted YBCO films on c-axis tilted ISD MgO-buffered metallic substrates

    NASA Astrophysics Data System (ADS)

    Li, M.; Ma, B.; Koritala, R. E.; Fisher, B. L.; Venkataraman, K.; Maroni, V. A.; Vlasko-Vlasov, V.; Berghuis, P.; Welp, U.; Gray, K. E.; Balachandran, U.

    2003-05-01

    Biaxially textured MgO template layer was deposited on nontextured metal substrates by inclined-substrate deposition (ISD) at a deposition rate of 24-600 nm/min. c-axis untilted YBa 2Cu 3O 7- x (YBCO) films were deposited on these MgO-buffered substrates by pulsed laser deposition. The crystalline structures of the YBCO films and MgO layers were examined by X-ray pole figure analysis, X-ray φ-scans, and χ-scans. A tilt angle of 33° of the MgO[0 0 1] with respect to the substrate normal and c-axis untilted YBCO films were observed, respectively. Good biaxial texture of these films with full-width-at-half-maximum values of 13.8° and 10.6° for the φ-scans of YBCO(1 0 3) and MgO(2 2 0), respectively, were obtained. Morphologies were examined by scanning electron microscopy, which revealed a unique roof-tile feature and columnar grain growth for the ISD MgO layer. Raman spectroscopy and magneto-optical image technique were also used to evaluate the quality of the YBCO film. An angular dependence of Jc on the direction of an applied magnetic field confirmed the c-axis untilted orientation of the YBCO films. Tc=90 K with sharp transition and Jc=3.0×10 5 A/cm 2 at 77 K in zero field were obtained on 0.4-μm-thick YBCO films.

  7. Photoreactive self-assembled monolayer for the stabilization of tilt orientation of a director in vertically aligned nematic liquid crystals.

    PubMed

    Oh, Su Yeon; Kang, Shin-Woong

    2013-12-16

    Photo-reactive self-assembled monolayer (PR-SAM) is employed to mediate alignment of liquid crystals (LC) and stabilize the tilt orientation of a nematic director for a vertically aligned liquid crystal. Bifunctional PR-SAM formed by silane coupling reaction to oxide surfaces efficiently induces a homeotropic alignment and stabilizes LC director by the photo-polymerization under applied electric field. As a result, the substantial enhancement of electro-optic performance has been achieved after the PR-SAM assisted stabilization of tilt orientation of director. This approach for pretilt stabilization has multifarious advantages over the conventional PSVA. PMID:24514711

  8. Effect of Ply Orientation and Crack Location on SIFs in Finite Multilayers with Aligned Cracks

    NASA Astrophysics Data System (ADS)

    Chen, Linfeng; Pindera, Marek-Jerzy

    2008-02-01

    An exact elasticity solution is presented for arbitrarily laminated finite multilayers in a state of generalized plane deformation under horizontally pinned end constraints that are weakened by aligned cracks. Based on half-range Fourier series and the local/global stiffness matrix approach, the mixed boundary-value problem is reduced to Cauchy-type singular integral equations in the unknown displacement discontinuities. Solution to these equations is obtained using the approach developed by Erdogan and co-workers. Numerical results quantify the thus-far undocumented geometric and material effects on Mode I, II and III stress intensity factors in composite multilayers with interacting cracks under uniform vertical displacement. These effects include finite dimensions, crack location, material anisotropy due to a unidirectional fiber-reinforced layer/s orientation, and orientational grading.

  9. Nanofiber Alignment Regulates NIH3T3 Cell Orientation and Cytoskeletal Gene Expression on Electrospun PCL+Gelatin Nanofibers

    PubMed Central

    Fee, Timothy; Surianarayanan, Swetha; Downs, Crawford; Zhou, Yong; Berry, Joel

    2016-01-01

    To examine the influence of substrate topology on the behavior of fibroblasts, tissue engineering scaffolds were electrospun from polycaprolactone (PCL) and a blend of PCL and gelatin (PCL+Gel) to produce matrices with both random and aligned nanofibrous orientations. The addition of gelatin to the scaffold was shown to increase the hydrophilicity of the PCL matrix and to increase the proliferation of NIH3T3 cells compared to scaffolds of PCL alone. The orientation of nanofibers within the matrix did not have an effect on the proliferation of adherent cells, but cells on aligned substrates were shown to elongate and align parallel to the direction of substrate fiber alignment. A microarray of cyotoskeleton regulators was probed to examine differences in gene expression between cells grown on an aligned and randomly oriented substrates. It was found that transcriptional expression of eight genes was statistically different between the two conditions, with all of them being upregulated in the aligned condition. The proteins encoded by these genes are linked to production and polymerization of actin microfilaments, as well as focal adhesion assembly. Taken together, the data indicates NIH3T3 fibroblasts on aligned substrates align themselves parallel with their substrate and increase production of actin and focal adhesion related genes. PMID:27196306

  10. Nanofiber Alignment Regulates NIH3T3 Cell Orientation and Cytoskeletal Gene Expression on Electrospun PCL+Gelatin Nanofibers.

    PubMed

    Fee, Timothy; Surianarayanan, Swetha; Downs, Crawford; Zhou, Yong; Berry, Joel

    2016-01-01

    To examine the influence of substrate topology on the behavior of fibroblasts, tissue engineering scaffolds were electrospun from polycaprolactone (PCL) and a blend of PCL and gelatin (PCL+Gel) to produce matrices with both random and aligned nanofibrous orientations. The addition of gelatin to the scaffold was shown to increase the hydrophilicity of the PCL matrix and to increase the proliferation of NIH3T3 cells compared to scaffolds of PCL alone. The orientation of nanofibers within the matrix did not have an effect on the proliferation of adherent cells, but cells on aligned substrates were shown to elongate and align parallel to the direction of substrate fiber alignment. A microarray of cyotoskeleton regulators was probed to examine differences in gene expression between cells grown on an aligned and randomly oriented substrates. It was found that transcriptional expression of eight genes was statistically different between the two conditions, with all of them being upregulated in the aligned condition. The proteins encoded by these genes are linked to production and polymerization of actin microfilaments, as well as focal adhesion assembly. Taken together, the data indicates NIH3T3 fibroblasts on aligned substrates align themselves parallel with their substrate and increase production of actin and focal adhesion related genes. PMID:27196306

  11. Orientation variation of dayside auroral arc alignments obtained from all-sky observation at yellow river station, Svalbard

    NASA Astrophysics Data System (ADS)

    Qiu, Qi; Yang, Hui-Gen; Lu, Quan-Ming; Hu, Ze-Jun; Han, De-Sheng; Wang, Qian

    2016-05-01

    The orientations of dayside auroral arc alignments were calculated for over 40,000 images from all-sky observation at Yellow River Station, Svalbard. For each arc, its "orientation" and "tilt" are defined as the angle the arc alignment makes with the dusk-dawn direction and the local east-west direction, respectively. The mean arc orientation increases linearly with the increasing magnetic local time (MLT). There is a reversal point of the arc tilt located at near 10.5 MLT. Compared with the mean orientation, auroral arc alignment tilts to morning side in the higher latitude and tilts to evening side in the lower latitude in the prenoon sector, whereas it is the opposite in the postnoon sector. We further studied the effects of the interplanetary magnetic field (IMF) on the location of the arc tilt reversal point. We found that the reversal position shifts toward the midday for negative By.

  12. Distinct modes of mitotic spindle orientation align cells in the dorsal midline of ascidian embryos.

    PubMed

    Negishi, Takefumi; Yasuo, Hitoyoshi

    2015-12-01

    The orientation of cell division can have important consequences on the choice of cell fates adopted by each daughter cell as well as on the architecture of the tissue within which the dividing cell resides. We have studied in detail the oriented cell divisions that take place in the dorsal midline of the ascidian embryo. The dorsal midline cells of the ascidian embryo emerge following an asymmetric cell division oriented along the animal-vegetal (A-V) axis. This division generates the NN (Notochord-Neural) cell at the margin and the E (Endoderm) cell more vegetally. Deviating from the default mode of cell division, these sister cells divide again along the A-V axis to generate a column of four cells. We describe these cell divisions in detail. We show that the NN cell mitotic spindle rotates 90° to align along the A-V axis while the E cell spindle forms directly along the axis following the asymmetric migration of its centrosomes. We combine live imaging, embryo manipulations and pharmacological modulation of cytoskeletal elements to address the mechanisms underlying these distinct subcellular behaviours. Our evidence suggests that, in E cells, aster asymmetry together with the E cell shape contribute to the asymmetric centrosome migration. In NN cells, an intrinsic cytoplasmic polarisation of the cell results in the accumulation of dynein to the animal pole side. Our data support a model in which a dynein-dependent directional cytoplasmic pulling force may be responsible for the NN cell spindle rotation. PMID:26452428

  13. Growth and structural discrimination of cortical neurons on randomly oriented and vertically aligned dense carbon nanotube networks

    PubMed Central

    Nick, Christoph; Yadav, Sandeep; Joshi, Ravi

    2014-01-01

    Summary The growth of cortical neurons on three dimensional structures of spatially defined (structured) randomly oriented, as well as on vertically aligned, carbon nanotubes (CNT) is studied. Cortical neurons are attracted towards both types of CNT nano-architectures. For both, neurons form clusters in close vicinity to the CNT structures whereupon the randomly oriented CNTs are more closely colonised than the CNT pillars. Neurons develop communication paths via neurites on both nanoarchitectures. These neuron cells attach preferentially on the CNT sidewalls of the vertically aligned CNT architecture instead than onto the tips of the individual CNT pillars. PMID:25247139

  14. Crystal alignments in the fast ice of Arctic Alaska

    SciTech Connect

    Weeks, W.F.; Gow, A.J.

    1980-02-20

    Field observations at 60 sites located in the fast or near-fast ice along a 1200-km stretch of the north coast of Alaska between the Bering Strait and Barter Island have shown that the great majority of the ice samples (95%) exhibit striking c axis alignments within the horizontal plane. In all cases the degree of preferred orientation increased with depth in the ice. Representative standard deviations around a mean direction in the horizontal plane are commonly less than +- 10/sup 0/ for samples collected near the bottom of the ice. At a given site the mean c axis direction X-bar/sub 0/ may vary as much as 20/sup 0/ with vertical location in the ice sheet. The c axis allignments in the nearshore region generally parallel the coast, with strong alignments occurring in the lagoon systems between the barrier islands and the coast and seaward of the barrier islands. In passes between islands and in entrances such as the opening to Kotzebue Sound the alignment is parallel to the channel. Only limited observations are available farther seaward over the inner (10- to 50-m isobaths) and outer (50-m isobath to shelf break) shelf regions. These indicate Ne-SW and E-W alignments, respectively, in the Beaufort Sea north of Prudhoe Bay.

  15. De Novo Determination of Internuclear Vector Orientations from Residual Dipolar Couplings Measured in Three Independent Alignment Media

    PubMed Central

    Ruan, Ke; Briggman, Kathryn B.; Tolman, Joel R.

    2010-01-01

    The straightforward interpretation of solution state residual dipolar couplings (RDCs) in terms of internuclear vector orientations generally requires prior knowledge of the alignment tensor, which in turn is normally estimated using a structural model. We have developed a protocol which allows the requirement for prior structural knowledge to be dispensed with as long as RDC measurements can be made in three independent alignment media. This approach, called Rigid Structure from Dipolar Couplings (RSDC), allows vector orientations and alignment tensors to be determined de novo from just three independent sets of RDCs. It is shown that complications arising from the existence of multiple solutions can be overcome by careful consideration of alignment tensor magnitudes in addition to the agreement between measured and calculated RDCs. Extensive simulations as well applications to the proteins ubiquitin and Staphylococcal protein GB1 demonstrate that this method can provide robust determinations of alignment tensors and amide N-H bond orientations often with better than 10° accuracy, even in the presence of modest levels of internal dynamics. PMID:18478335

  16. The spindle assembly checkpoint promotes chromosome bi-orientation: A novel Mad1 role in chromosome alignment.

    PubMed

    Akera, Takashi; Watanabe, Yoshinori

    2016-01-01

    Faithful chromosome segregation relies on dynamic interactions between spindle microtubules and chromosomes. Especially, all chromosomes must be aligned at the equator of the spindle to establish bi-orientation before they start to segregate. The spindle assembly checkpoint (SAC) monitors this process, inhibiting chromosome segregation until all chromosomes achieve bi-orientation. The original concept of 'checkpoints' was proposed as an external surveillance system that does not play an active role in the process it monitors. However, accumulating evidence from recent studies suggests that SAC components do play an active role in chromosome bi-orientation. In this review, we highlight a novel Mad1 role in chromosome alignment, which is the first conserved mechanism that links the SAC and kinesin-mediated chromosome gliding. PMID:26752263

  17. Growth of Well-Aligned InN Nanorods on Amorphous Glass Substrates

    NASA Astrophysics Data System (ADS)

    Li, Huijie; Zhao, Guijuan; Wei, Hongyuan; Wang, Lianshan; Chen, Zhen; Yang, Shaoyan

    2016-05-01

    The growth of well-aligned nanorods on amorphous substrates can pave the way to fabricate large-scale and low-cost devices. In this work, we successfully prepared vertically well-aligned c-axis InN nanorods on amorphous glass substrate by metal-organic chemical vapor deposition. The products formed directly on bare glass are randomly oriented without preferential growth direction. By inserting a GaN/Ti interlayer, the nanowire alignment can be greatly improved as indicated by scanning electron microscopy and X-ray diffraction.

  18. Growth of Well-Aligned InN Nanorods on Amorphous Glass Substrates.

    PubMed

    Li, Huijie; Zhao, Guijuan; Wei, Hongyuan; Wang, Lianshan; Chen, Zhen; Yang, Shaoyan

    2016-12-01

    The growth of well-aligned nanorods on amorphous substrates can pave the way to fabricate large-scale and low-cost devices. In this work, we successfully prepared vertically well-aligned c-axis InN nanorods on amorphous glass substrate by metal-organic chemical vapor deposition. The products formed directly on bare glass are randomly oriented without preferential growth direction. By inserting a GaN/Ti interlayer, the nanowire alignment can be greatly improved as indicated by scanning electron microscopy and X-ray diffraction. PMID:27229517

  19. Correlation between micrometer-scale ripple alignment and atomic-scale crystallographic orientation of monolayer graphene

    PubMed Central

    Choi, Jin Sik; Chang, Young Jun; Woo, Sungjong; Son, Young-Woo; Park, Yeonggu; Lee, Mi Jung; Byun, Ik-Su; Kim, Jin-Soo; Choi, Choon-Gi; Bostwick, Aaron; Rotenberg, Eli; Park, Bae Ho

    2014-01-01

    Deformation normal to the surface is intrinsic in two-dimensional materials due to phononic thermal fluctuations at finite temperatures. Graphene's negative thermal expansion coefficient is generally explained by such an intrinsic property. Recently, friction measurements on graphene exfoliated on a silicon oxide surface revealed an anomalous anisotropy whose origin was believed to be the formation of ripple domains. Here, we uncover the atomistic origin of the observed friction domains using a cantilever torsion microscopy in conjunction with angle-resolved photoemission spectroscopy. We experimentally demonstrate that ripples on graphene are formed along the zigzag direction of the hexagonal lattice. The formation of zigzag directional ripple is consistent with our theoretical model that takes account of the atomic-scale bending stiffness of carbon-carbon bonds and the interaction of graphene with the substrate. The correlation between micrometer-scale ripple alignment and atomic-scale arrangement of exfoliated monolayer graphene is first discovered and suggests a practical tool for measuring lattice orientation of graphene. PMID:25434431

  20. Correlation between micrometer-scale ripple alignment and atomic-scale crystallographic orientation of monolayer graphene

    SciTech Connect

    Choi, Jin Sik; Chang, Young Jun; Woo, Sungjong; Son, Young-Woo; Park, Yeonggu; Lee, Mi Jung; Byun, Ik-Su; Kim, Jin-Soo; Choi, Choon-Gi; Bostwick, Aaron; Rotenberg, Eli; Park, Bae Ho

    2014-12-01

    Deformation normal to the surface is intrinsic in two-dimensional materials due to phononic thermal fluctuations at finite temperatures. Graphene's negative thermal expansion coefficient is generally explained by such an intrinsic property. Recently, friction measurements on graphene exfoliated on a silicon oxide surface revealed an anomalous anisotropy whose origin was believed to be the formation of ripple domains. Here, we uncover the atomistic origin of the observed friction domains using a cantilever torsion microscopy in conjunction with angle-resolved photoemission spectroscopy. We experimentally demonstrate that ripples on graphene are formed along the zigzag direction of the hexagonal lattice. The formation of zigzag directional ripple is consistent with our theoretical model that takes account of the atomic-scale bending stiffness of carbon-carbon bonds and the interaction of graphene with the substrate. Lastly, the correlation between micrometer-scale ripple alignment and atomic-scale arrangement of exfoliated monolayer graphene is first discovered and suggests a practical tool for measuring lattice orientation of graphene.

  1. Correlation between micrometer-scale ripple alignment and atomic-scale crystallographic orientation of monolayer graphene

    DOE PAGESBeta

    Choi, Jin Sik; Chang, Young Jun; Woo, Sungjong; Son, Young-Woo; Park, Yeonggu; Lee, Mi Jung; Byun, Ik-Su; Kim, Jin-Soo; Choi, Choon-Gi; Bostwick, Aaron; et al

    2014-12-01

    Deformation normal to the surface is intrinsic in two-dimensional materials due to phononic thermal fluctuations at finite temperatures. Graphene's negative thermal expansion coefficient is generally explained by such an intrinsic property. Recently, friction measurements on graphene exfoliated on a silicon oxide surface revealed an anomalous anisotropy whose origin was believed to be the formation of ripple domains. Here, we uncover the atomistic origin of the observed friction domains using a cantilever torsion microscopy in conjunction with angle-resolved photoemission spectroscopy. We experimentally demonstrate that ripples on graphene are formed along the zigzag direction of the hexagonal lattice. The formation of zigzagmore » directional ripple is consistent with our theoretical model that takes account of the atomic-scale bending stiffness of carbon-carbon bonds and the interaction of graphene with the substrate. Lastly, the correlation between micrometer-scale ripple alignment and atomic-scale arrangement of exfoliated monolayer graphene is first discovered and suggests a practical tool for measuring lattice orientation of graphene.« less

  2. The influence of growth speed, orientation and environment on fracture of aligned Al-CuAl2

    NASA Technical Reports Server (NTRS)

    Skiff, P. K.; Stoloff, N. S.

    1977-01-01

    There has been considerable interest in the mechanical properties of aligned eutectics as functions of microstructure, orientation between reinforcement and stress axis, and temperature of testing. However, little is known about the behavior of these alloys in aggressive environments, such as liquid metals, with the exception of a recent paper on embrittlement of several eutectic alloys in gallium and gallium-indium alloys. This paper is concerned with the effects of a liquid Ga-16%In solution on tensile behavior of an aligned Al-CuAl2 eutectic.

  3. Perfect alignment and preferential orientation of nitrogen-vacancy centers during chemical vapor deposition diamond growth on (111) surfaces

    SciTech Connect

    Michl, Julia; Zaiser, Sebastian; Jakobi, Ingmar; Waldherr, Gerald; Dolde, Florian; Neumann, Philipp Wrachtrup, Jörg; Teraji, Tokuyuki; Doherty, Marcus W.; Manson, Neil B.; Isoya, Junichi

    2014-03-10

    Synthetic diamond production is a key to the development of quantum metrology and quantum information applications of diamond. The major quantum sensor and qubit candidate in diamond is the nitrogen-vacancy (NV) color center. This lattice defect comes in four different crystallographic orientations leading to an intrinsic inhomogeneity among NV centers, which is undesirable in some applications. Here, we report a microwave plasma-assisted chemical vapor deposition diamond growth technique on (111)-oriented substrates, which yields perfect alignment (94% ± 2%) of as-grown NV centers along a single crystallographic direction. In addition, clear evidence is found that the majority (74% ± 4%) of the aligned NV centers were formed by the nitrogen being first included in the (111) growth surface and then followed by the formation of a neighboring vacancy on top. The achieved homogeneity of the grown NV centers will tremendously benefit quantum information and metrology applications.

  4. Phonon mean free path of graphite along the c-axis

    SciTech Connect

    Wei, Zhiyong; Yang, Juekuan; Chen, Weiyu; Bi, Kedong; Chen, Yunfei

    2014-02-24

    Phonon transport in the c-axis direction of graphite thin films has been studied using non-equilibrium molecular dynamics (MD) simulation. The simulation results show that the c-axis thermal conductivities for films of thickness ranging from 20 to 500 atomic layers are significantly lower than the bulk value. Based on the MD data, a method is developed to construct the c-axis thermal conductivity as an accumulation function of phonon mean free path (MFP), from which we show that phonons with MFPs from 2 to 2000 nm contribute ∼80% of the graphite c-axis thermal conductivity at room temperature, and phonons with MFPs larger than 100 nm contribute over 40% to the c-axis thermal conductivity. These findings indicate that the commonly believed value of just a few nanometers from the simple kinetic theory drastically underestimates the c-axis phonon MFP of graphite.

  5. Temperature-Dependent Mean Free Path Spectra of Thermal Phonons Along the c-Axis of Graphite.

    PubMed

    Zhang, Hang; Chen, Xiangwen; Jho, Young-Dahl; Minnich, Austin J

    2016-03-01

    Heat conduction in graphite has been studied for decades because of its exceptionally large thermal anisotropy. While the bulk thermal conductivities along the in-plane and cross-plane directions are well-known, less understood are the microscopic properties of the thermal phonons responsible for heat conduction. In particular, recent experimental and computational works indicate that the average phonon mean free path (MFP) along the c-axis is considerably larger than that estimated by kinetic theory, but the distribution of MFPs remains unknown. Here, we report the first quantitative measurements of c-axis phonon MFP spectra in graphite at a variety of temperatures using time-domain thermoreflectance measurements of graphite flakes with variable thickness. Our results indicate that c-axis phonon MFPs have values of a few hundred nanometers at room temperature and a much narrower distribution than in isotropic crystals. At low temperatures, phonon scattering is dominated by grain boundaries separating crystalline regions of different rotational orientation. Our study provides important new insights into heat transport and phonon scattering mechanisms in graphite and other anisotropic van der Waals solids. PMID:26840052

  6. Boundary conditions for fluids with internal orientational degrees of freedom: Apparent velocity slip associated with the molecular alignment

    SciTech Connect

    Heidenreich, Sebastian; Hess, Siegfried; Ilg, Patrick

    2007-06-15

    Boundary effects are investigated for fluids with internal orientational degrees of freedom such as molecular liquids, thermotropic and lyotropic liquid crystals, and polymeric fluids. The orientational degrees of freedom are described by the second rank alignment tensor which is related to the birefringence. We use a standard model to describe the orientational dynamics in the presence of flow, the momentum balance equations, and a constitutive law for the pressure tensor to describe our system. In the spirit of irreversible thermodynamics, boundary conditions are formulated for the mechanical slip velocity and the flux of the alignment. They are set up such that the entropy production at the wall inferred from the entropy flux is positive definite. Even in the absence of a true mechanical slip, the coupling between orientation and flow leads to flow profiles with an apparent slip. This has consequences for the macroscopically measurable effective velocity. In analytical investigations, we consider the simplified case of an isotropic fluid in the Newtonian and stationary flow regime. For special geometries such as plane and cylindrical Couette flow, plane Poiseuille flow, and a flow down an inclined plane, we demonstrate explicitly how the boundary conditions lead to an apparent slip. Furthermore, we discuss the dependence of the effective viscosity and of the effective slip length on the model parameters.

  7. Boundary conditions for fluids with internal orientational degrees of freedom: apparent velocity slip associated with the molecular alignment.

    PubMed

    Heidenreich, Sebastian; Ilg, Patrick; Hess, Siegfried

    2007-06-01

    Boundary effects are investigated for fluids with internal orientational degrees of freedom such as molecular liquids, thermotropic and lyotropic liquid crystals, and polymeric fluids. The orientational degrees of freedom are described by the second rank alignment tensor which is related to the birefringence. We use a standard model to describe the orientational dynamics in the presence of flow, the momentum balance equations, and a constitutive law for the pressure tensor to describe our system. In the spirit of irreversible thermodynamics, boundary conditions are formulated for the mechanical slip velocity and the flux of the alignment. They are set up such that the entropy production at the wall inferred from the entropy flux is positive definite. Even in the absence of a true mechanical slip, the coupling between orientation and flow leads to flow profiles with an apparent slip. This has consequences for the macroscopically measurable effective velocity. In analytical investigations, we consider the simplified case of an isotropic fluid in the Newtonian and stationary flow regime. For special geometries such as plane and cylindrical Couette flow, plane Poiseuille flow, and a flow down an inclined plane, we demonstrate explicitly how the boundary conditions lead to an apparent slip. Furthermore, we discuss the dependence of the effective viscosity and of the effective slip length on the model parameters. PMID:17677352

  8. Human airway smooth muscle maintain in situ cell orientation and phenotype when cultured on aligned electrospun scaffolds

    PubMed Central

    Morris, G. E.; Bridge, J. C.; Eltboli, O. M. I.; Lewis, M. P.; Knox, A. J.; Aylott, J. W.; Brightling, C. E.; Ghaemmaghami, A. M.

    2014-01-01

    Human airway smooth muscle (HASM) contraction plays a central role in regulating airway resistance in both healthy and asthmatic bronchioles. In vitro studies that investigate the intricate mechanisms that regulate this contractile process are predominantly conducted on tissue culture plastic, a rigid, 2D geometry, unlike the 3D microenvironment smooth muscle cells are exposed to in situ. It is increasingly apparent that cellular characteristics and responses are altered between cells cultured on 2D substrates compared with 3D topographies. Electrospinning is an attractive method to produce 3D topographies for cell culturing as the fibers produced have dimensions within the nanometer range, similar to cells' natural environment. We have developed an electrospun scaffold using the nondegradable, nontoxic, polymer polyethylene terephthalate (PET) composed of uniaxially orientated nanofibers and have evaluated this topography's effect on HASM cell adhesion, alignment, and morphology. The fibers orientation provided contact guidance enabling the formation of fully aligned sheets of smooth muscle. Moreover, smooth muscle cells cultured on the scaffold present an elongated cell phenotype with altered contractile protein levels and distribution. HASM cells cultured on this scaffold responded to the bronchoconstrictor bradykinin. The platform presented provides a novel in vitro model that promotes airway smooth muscle cell development toward a more in vivo-like phenotype while providing topological cues to ensure full cell alignment. PMID:24793171

  9. Nanoconfinement induced crystal orientation and large piezoelectric coefficient in vertically aligned P(VDF-TrFE) nanotube array

    PubMed Central

    Liew, Weng Heng; Mirshekarloo, Meysam Sharifzadeh; Chen, Shuting; Yao, Kui; Tay, Francis Eng Hock

    2015-01-01

    Vertically aligned piezoelectric P(VDF-TrFE) nanotube array comprising nanotubes embedded in anodized alumina membrane matrix without entanglement has been fabricated. It is found that the crystallographic polar axes of the P(VDF-TrFE) nanotubes are oriented along the nanotubes long axes. Such a desired crystal orientation is due to the kinetic selection mechanism for lamellae growth confined in the nanopores. The preferred crystal orientation in nanotubes leads to huge piezoelectric coefficients of the P(VDF-TrFE). The piezoelectric strain and voltage coefficients of P(VDF-TrFE) nanotube array are observed to be 1.97 and 3.40 times of those for conventional spin coated film. Such a significant performance enhancement is attributed to the well-controlled polarization orientation, the elimination of the substrate constraint, and the low dielectric constant of the nanotube array. The P(VDF-TrFE) nanotube array exhibiting the unique structure and outstanding piezoelectric performance is promising for wide applications, including various electrical devices and electromechanical sensors and transducers. PMID:25966301

  10. Nanoconfinement induced crystal orientation and large piezoelectric coefficient in vertically aligned P(VDF-TrFE) nanotube array.

    PubMed

    Liew, Weng Heng; Mirshekarloo, Meysam Sharifzadeh; Chen, Shuting; Yao, Kui; Tay, Francis Eng Hock

    2015-01-01

    Vertically aligned piezoelectric P(VDF-TrFE) nanotube array comprising nanotubes embedded in anodized alumina membrane matrix without entanglement has been fabricated. It is found that the crystallographic polar axes of the P(VDF-TrFE) nanotubes are oriented along the nanotubes long axes. Such a desired crystal orientation is due to the kinetic selection mechanism for lamellae growth confined in the nanopores. The preferred crystal orientation in nanotubes leads to huge piezoelectric coefficients of the P(VDF-TrFE). The piezoelectric strain and voltage coefficients of P(VDF-TrFE) nanotube array are observed to be 1.97 and 3.40 times of those for conventional spin coated film. Such a significant performance enhancement is attributed to the well-controlled polarization orientation, the elimination of the substrate constraint, and the low dielectric constant of the nanotube array. The P(VDF-TrFE) nanotube array exhibiting the unique structure and outstanding piezoelectric performance is promising for wide applications, including various electrical devices and electromechanical sensors and transducers. PMID:25966301

  11. Fabrication of alumina porous scaffolds with aligned oriented pores for bone tissue engineering applications

    NASA Astrophysics Data System (ADS)

    Sarhadi, Fatemeh; Shafiee Afarani, Mahdi; Mohebbi-Kalhori, Davod; Shayesteh, Masoud

    2016-04-01

    In the present study, porous alumina scaffolds with specific orientation and anisotropic properties are fabricated for application in bone tissue repair. The scaffolds with double shape pores, tubular oriented and isotropic rounded pores, were prepared using alumina and silica as starting materials by the slip casting route. Milled polyurethane foam and silk fibers were applied as replica materials as well. The effect of fiber types and diameter and number of fibers on the microstructure and pore size was studied. Moreover, different characteristics such as porosity, density, orientation, flexural strength and compressive strength of the samples were investigated. Results showed that various fibers with different diameters and numbers led to forming the pores with different pore sizes, microstructure and consequently changes in the physical and mechanical properties. In addition, the simultaneous presence of fibers and particles led to more porous scaffolds. The oriented tiny micro-tube and rounded pores were observed in all porous ceramic scaffolds. Mechanical testing showed an anisotropy in the mechanical behaviors such that higher strengths were observed in the oriented pore direction than that of transverse. With increasing the number and diameter of silk fibers, the scaffolds with a high porosity up to 68 vol% and proper flexural strength were obtained.

  12. Anisotropic electronic structure of in-plane aligned a-axis YBa2Cu3O7-δ thin films

    NASA Astrophysics Data System (ADS)

    Luo, C. W.; Chen, M. H.; Liu, S. J.; Wu, K. H.; Juang, J. Y.; Uen, T. M.; Lin, J.-Y.; Chen, J.-M.; Gou, Y. S.

    2003-09-01

    Polarization-dependent x-ray absorption near-edge spectra (XANES) of the O 1s has been measured on a highly in-plane aligned a-axis YBa2Cu3O7-δ (YBCO) thin film. The in-plane XANES, with the electric field E of the linearly polarized synchrotron light being parallel to the b or c axis of YBCO films (E//b or E//c) were obtained in a normal-incidence alignment. The XANES for E//a was then calculated from the data obtained by varying the angle. The results lend strong support to those obtained by using detwinned YBCO single crystals in all crystalline orientations, including the extrapolated c-axis spectra.

  13. Effect of magnetic field strength on the alignment of α''-Fe16N2 nanoparticle films

    NASA Astrophysics Data System (ADS)

    Kartikowati, Christina W.; Suhendi, Asep; Zulhijah, Rizka; Ogi, Takashi; Iwaki, Toru; Okuyama, Kikuo

    2016-01-01

    Aligning the magnetic orientation is one strategy to improve the magnetic performance of magnetic materials. In this study, well-dispersed single-domain core-shell α''-Fe16N2/Al2O3 nanoparticles (NPs) were aligned by vertically applying magnetic fields with various strengths to a Si wafer substrate followed by fixation with resin. X-ray diffraction indicated that the alignment of the easy c-axis of the α''-Fe16N2 crystal and the magnetic orientation of the NPs depended upon the applied magnetic field. Magnetic analysis demonstrated that increasing the magnetic field strength resulted in hysteresis loops approaching a rectangular form, implying a higher magnetic coercivity, remanence, and maximum energy product. The same tendency was also observed when a horizontal magnetic field was applied. The fixation of the easy c-axis alignment of each nanoparticle caused by Brownian rotation under the magnetic field, instead of Néel rotation, was the reason for the enhancement in the magnetic performance. These results on the alignment of the magnetic orientation of α''-Fe16N2 NPs suggest the practical application of high-performance permanent bulk magnets from well-dispersed single-domain α''-Fe16N2/Al2O3 NPs.

  14. Effect of magnetic field strength on the alignment of α''-Fe16N2 nanoparticle films.

    PubMed

    Kartikowati, Christina W; Suhendi, Asep; Zulhijah, Rizka; Ogi, Takashi; Iwaki, Toru; Okuyama, Kikuo

    2016-02-01

    Aligning the magnetic orientation is one strategy to improve the magnetic performance of magnetic materials. In this study, well-dispersed single-domain core-shell α''-Fe16N2/Al2O3 nanoparticles (NPs) were aligned by vertically applying magnetic fields with various strengths to a Si wafer substrate followed by fixation with resin. X-ray diffraction indicated that the alignment of the easy c-axis of the α''-Fe16N2 crystal and the magnetic orientation of the NPs depended upon the applied magnetic field. Magnetic analysis demonstrated that increasing the magnetic field strength resulted in hysteresis loops approaching a rectangular form, implying a higher magnetic coercivity, remanence, and maximum energy product. The same tendency was also observed when a horizontal magnetic field was applied. The fixation of the easy c-axis alignment of each nanoparticle caused by Brownian rotation under the magnetic field, instead of Néel rotation, was the reason for the enhancement in the magnetic performance. These results on the alignment of the magnetic orientation of α''-Fe16N2 NPs suggest the practical application of high-performance permanent bulk magnets from well-dispersed single-domain α''-Fe16N2/Al2O3 NPs. PMID:26758175

  15. C-Axis Properties of DyNi2B2C System

    NASA Astrophysics Data System (ADS)

    Lee, W. C.

    2012-02-01

    We have measured the electrical resistivity along c-axis ρc(T, H) of the DyNi2B2C single crystal with the magnetic fields perpendicular to the c-axis and the magnetization isotherms M(H) of the DyNi2B2C single crystal with magnetic fields perpendicular and parallel to the c-axis. We confirmed that Neel temperature TN is 10.3K from the ρc(T) result which is consistent with that from previous ρab(T) result. In addition, the constructed critical fields Hc2(T) curve and magnetic transitions diagram of DyNi2B2C from ρc(T) magnetic fields perpendicular to c-axis is similar to that of ρab(T) result, which is thought to arise that 3 D magnetic structure of DyNi2B2C.

  16. Note: Non-invasive optical method for rapid determination of alignment degree of oriented nanofibrous layers

    NASA Astrophysics Data System (ADS)

    Pokorny, M.; Klemes, J.; Rebicek, J.; Kotzianova, A.; Velebny, V.

    2015-10-01

    This paper presents a rapid non-destructive method that provides information on the anisotropic internal structure of nanofibrous layers. A laser beam of a wavelength of 632.8 nm is directed at and passes through a nanofibrous layer prepared by electrostatic spinning. Information about the structural arrangement of nanofibers in the layer is directly visible in the form of a diffraction image formed on a projection screen or obtained from measured intensities of the laser beam passing through the sample which are determined by the dependency of the angle of the main direction of polarization of the laser beam on the axis of alignment of nanofibers in the sample. Both optical methods were verified on Polyvinyl alcohol (PVA) nanofibrous layers (fiber diameter of 470 nm) with random, single-axis aligned and crossed structures. The obtained results match the results of commonly used methods which apply the analysis of electron microscope images. The presented simple method not only allows samples to be analysed much more rapidly and without damaging them but it also makes possible the analysis of much larger areas, up to several square millimetres, at the same time.

  17. Note: Non-invasive optical method for rapid determination of alignment degree of oriented nanofibrous layers

    SciTech Connect

    Pokorny, M.; Rebicek, J.; Klemes, J.; Kotzianova, A.; Velebny, V.

    2015-10-15

    This paper presents a rapid non-destructive method that provides information on the anisotropic internal structure of nanofibrous layers. A laser beam of a wavelength of 632.8 nm is directed at and passes through a nanofibrous layer prepared by electrostatic spinning. Information about the structural arrangement of nanofibers in the layer is directly visible in the form of a diffraction image formed on a projection screen or obtained from measured intensities of the laser beam passing through the sample which are determined by the dependency of the angle of the main direction of polarization of the laser beam on the axis of alignment of nanofibers in the sample. Both optical methods were verified on Polyvinyl alcohol (PVA) nanofibrous layers (fiber diameter of 470 nm) with random, single-axis aligned and crossed structures. The obtained results match the results of commonly used methods which apply the analysis of electron microscope images. The presented simple method not only allows samples to be analysed much more rapidly and without damaging them but it also makes possible the analysis of much larger areas, up to several square millimetres, at the same time.

  18. Note: Non-invasive optical method for rapid determination of alignment degree of oriented nanofibrous layers.

    PubMed

    Pokorny, M; Klemes, J; Rebicek, J; Kotzianova, A; Velebny, V

    2015-10-01

    This paper presents a rapid non-destructive method that provides information on the anisotropic internal structure of nanofibrous layers. A laser beam of a wavelength of 632.8 nm is directed at and passes through a nanofibrous layer prepared by electrostatic spinning. Information about the structural arrangement of nanofibers in the layer is directly visible in the form of a diffraction image formed on a projection screen or obtained from measured intensities of the laser beam passing through the sample which are determined by the dependency of the angle of the main direction of polarization of the laser beam on the axis of alignment of nanofibers in the sample. Both optical methods were verified on Polyvinyl alcohol (PVA) nanofibrous layers (fiber diameter of 470 nm) with random, single-axis aligned and crossed structures. The obtained results match the results of commonly used methods which apply the analysis of electron microscope images. The presented simple method not only allows samples to be analysed much more rapidly and without damaging them but it also makes possible the analysis of much larger areas, up to several square millimetres, at the same time. PMID:26521008

  19. CW dipolar broadening EPR spectroscopy and mechanically aligned bilayers used to measure distance and relative orientation between two TOAC spin labels on an antimicrobial peptide

    NASA Astrophysics Data System (ADS)

    Sahu, Indra D.; Hustedt, Eric J.; Ghimire, Harishchandra; Inbaraj, Johnson J.; McCarrick, Robert M.; Lorigan, Gary A.

    2014-12-01

    An EPR membrane alignment technique was applied to measure distance and relative orientations between two spin labels on a protein oriented along the surface of the membrane. Previously we demonstrated an EPR membrane alignment technique for measuring distances and relative orientations between two spin labels using a dual TOAC-labeled integral transmembrane peptide (M2δ segment of Acetylcholine receptor) as a test system. In this study we further utilized this technique and successfully measured the distance and relative orientations between two spin labels on a membrane peripheral peptide (antimicrobial peptide magainin-2). The TOAC-labeled magainin-2 peptides were mechanically aligned using DMPC lipids on a planar quartz support, and CW-EPR spectra were recorded at specific orientations. Global analysis in combination with rigorous spectral simulation was used to simultaneously analyze data from two different sample orientations for both single- and double-labeled peptides. We measured an internitroxide distance of 15.3 Å from a dual TOAC-labeled magainin-2 peptide at positions 8 and 14 that closely matches with the 13.3 Å distance obtained from a model of the labeled magainin peptide. In addition, the angles determining the relative orientations of the two nitroxides have been determined, and the results compare favorably with molecular modeling. This study demonstrates the utility of the technique for proteins oriented along the surface of the membrane in addition to the previous results for proteins situated within the membrane bilayer.

  20. CW Dipolar Broadening EPR Spectroscopy and Mechanically Aligned Bilayers Used to Measure Distance and Relative Orientation between Two TOAC Spin Labels on an Antimicrobial Peptide

    PubMed Central

    Sahu, Indra D.; Hustedt, Eric J.; Ghimire, Harishchandra; Inbaraj, Johnson J.; McCarrick, Robert M.; Lorigan, Gary A.

    2014-01-01

    An EPR membrane alignment technique was applied to measure distance and relative orientations between two spin labels on a protein oriented along the surface of the membrane. Previously we demonstrated an EPR membrane alignment technique for measuring distances and relative orientations between two spin labels using a dual TOAC-labeled integral transmembrane peptide (M2δ segment of Acetylcholine receptor) as a test system. In this study we further utilized this technique and successfully measured the distance and relative orientations between two spin labels on a membrane peripheral peptide (antimicrobial peptide magainin-2). The TOAC-labeled magainin-2 peptides were mechanically aligned using DMPC lipids on a planar quartz support, and CW-EPR spectra were recorded at specific orientations. Global analysis in combination with rigorous spectral simulation was used to simultaneously analyze data from two different sample orientations for both single-and double-labeled peptides. We measured an internitroxide distance of 15.3 Å from a dual TOAC-labeled magainin-2 peptide at positions 8 and 14 that closely matches with the 13.3 Å distance obtained from a model of the labeled magainin peptide. In addition, the angles determining the relative orientations of the two nitroxides have been determined, and the results compare favorably with molecular modeling. This study demonstrates the utility of the technique for proteins oriented along the surface of the membrane in addition to the previous results for proteins situated within the membrane bilayer. PMID:25462949

  1. Wave Propagation Direction and c-Axis Tilt Angle Influence on the Performance of ScAlN/Sapphire-Based SAW Devices.

    PubMed

    Kochhar, Abhay; Yamamoto, Yasuo; Teshigahara, Akihiko; Hashimoto, Ken-Ya; Tanaka, Shuji; Esashi, Masayoshi

    2016-07-01

    Some previously reported surface acoustic wave (SAW) devices using bulk piezoelectric substrates showed higher acoustic power radiated in either forward or backward wave propagation direction depending on their crystal orientations and are called natural single-phase unidirectional transducers (NSPUDT). While these reports were based on bulk piezoelectric substrates, we report directionality in the c-axis tilted 44% scandium doped aluminum nitride thin piezoelectric film-based SAW devices on sapphire. It is worth noting that our observance of directionality is specifically in Sezawa mode. We produced a c-axis tilt up to 5.5° over the single wafer and examined the directionality by comparing the forward and backward insertion loss utilizing split finger electrodes as a receiver. The wave propagation direction and c-axis tilt angle influence on the performance of SAW devices is evaluated. Furthermore, return loss and insertion loss data are presented for various SAW propagation directions and c-axis tilt angles. Finally, the comparison for both acoustic modes, i.e., Rayleigh and Sezawa, is reported. PMID:26978772

  2. Vertically Aligned Ge Nanowires on Flexible Plastic Films Synthesized by (111)-Oriented Ge Seeded Vapor-Liquid-Solid Growth.

    PubMed

    Toko, Kaoru; Nakata, Mitsuki; Jevasuwan, Wipakorn; Fukata, Naoki; Suemasu, Takashi

    2015-08-19

    Transfer-free fabrication of vertical Ge nanowires (NWs) on a plastic substrate is demonstrated using a vapor-liquid-solid (VLS) method. The crystal quality of Ge seed layers (50 nm thickness) prepared on plastic substrates strongly influenced the VLS growth morphology, i.e., the density, uniformity, and crystal quality of Ge NWs. The metal-induced layer exchange yielded a (111)-oriented Ge seed layer at 325 °C, which allowed for the VLS growth of vertically aligned Ge NWs. The Ge NW array had almost the same quality as that formed on a bulk Ge(111) substrate. Transmission electron microscopy demonstrated that the Ge NWs were defect-free single crystals. The present investigation paves the way for advanced electronic optical devices integrated on a low-cost flexible substrate. PMID:26230716

  3. Computing alignment and orientation of non-linear molecules at room temperatures using random phase wave functions

    NASA Astrophysics Data System (ADS)

    Kallush, Shimshon; Fleischer, Sharly; Ultrafast terahertz molecular dynamics Collaboration

    2015-05-01

    Quantum simulation of large open systems is a hard task that demands huge computation and memory costs. The rotational dynamics of non-linear molecules at high-temperature under external fields is such an example. At room temperature, the initial density matrix populates ~ 104 rotational states, and the whole coupled Hilbert space can reach ~ 106 states. Simulation by neither the direct density matrix nor the full basis set of populated wavefunctions is impossible. We employ the random phase wave function method to represent the initial state and compute several time dependent and independent observables such as the orientation and the alignment of the molecules. The error of the method was found to scale as N- 1 / 2, where N is the number of wave function realizations employed. Scaling vs. the temperature was computed for weak and strong fields. As expected, the convergence of the method increase rapidly with the temperature and the field intensity.

  4. Correction: Direct synthesis of large-scale hierarchical MoS2 films nanostructured with orthogonally oriented vertically and horizontally aligned layers.

    PubMed

    Zhang, Xiaoyan; Zhang, Saifeng; Chen, Bohua; Wang, Hao; Wu, Kan; Chen, Yang; Fan, Jintai; Qi, Shen; Cui, Xiaoli; Zhang, Long; Wang, Jun

    2016-01-28

    Correction for 'Direct synthesis of large-scale hierarchical MoS2 films nanostructured with orthogonally oriented vertically and horizontally aligned layers' by Xiaoyan Zhang et al., Nanoscale, 2016, DOI: 10.1039/c5nr05938k. PMID:26705550

  5. 'Fixed-axis' magnetic orientation by an amphibian: non-shoreward-directed compass orientation, misdirected homing or positioning a magnetite-based map detector in a consistent alignment relative to the magnetic field?

    PubMed

    Phillips, John B; Borland, S Chris; Freake, Michael J; Brassart, Jacques; Kirschvink, Joseph L

    2002-12-01

    Experiments were carried out to investigate the earlier prediction that prolonged exposure to long-wavelength (>500 nm) light would eliminate homing orientation by male Eastern red-spotted newts Notophthalmus viridescens. As in previous experiments, controls held in outdoor tanks under natural lighting conditions and tested in a visually uniform indoor arena under full-spectrum light were homeward oriented. As predicted, however, newts held under long-wavelength light and tested under either full-spectrum or long-wavelength light (>500 nm) failed to show consistent homeward orientation. The newts also did not orient with respect to the shore directions in the outdoor tanks in which they were held prior to testing. Unexpectedly, however, the newts exhibited bimodal orientation along a more-or-less 'fixed' north-northeast-south-southwest magnetic axis. The orientation exhibited by newts tested under full-spectrum light was indistinguishable from that of newts tested under long-wavelength light, although these two wavelength conditions have previously been shown to differentially affect both shoreward compass orientation and homing orientation. To investigate the possibility that the 'fixed-axis' response of the newts was mediated by a magnetoreception mechanism involving single-domain particles of magnetite, natural remanent magnetism (NRM) was measured from a subset of the newts. The distribution of NRM alignments with respect to the head-body axis of the newts was indistinguishable from random. Furthermore, there was no consistent relationship between the NRM of individual newts and their directional response in the overall sample. However, under full-spectrum, but not long-wavelength, light, the alignment of the NRM when the newts reached the 20 cm radius criterion circle in the indoor testing arena (estimated by adding the NRM alignment measured from each newt to its magnetic bearing) was non-randomly distributed. These findings are consistent with the earlier

  6. Alignment- and orientation-dependent strong-field ionization of molecules: Field-induced orbital distortion effects

    NASA Astrophysics Data System (ADS)

    Spiewanowski, Maciej Dominik; Madsen, Lars Bojer

    2015-05-01

    Strong-field ionization (SFI) is a starting point for many strong-field phenomena, e.g., high-order harmonic generation, as well as a source of fundamental information about the ionized target. Therefore, investigation of SFI of atoms and molecules has been the aim for research since the first strong laser pulses became available. We present a recently developed method, adiabatic strong-field approximation, to study ionization yields as a function of alignment angle for CO2, CO, and OCS molecules. We show that orbital distortion plays an important role in explaining the position and relative strength of maxima in the yields for both polar and nonpolar molecules, even for targets with low polarizabilities at low laser intensities. In particular, we report that for ionization of CO2 the maximum in ionization yield shifts towards the experimentally-measured maximum with respect to the strong-field approximation. For ionization of the CO molecule, not only does the theory predict the preferred direction of ionization correctly, but also the ratio between yields for the two molecular orientations where the electric field points either towards the C or towards the O end. Finally, we find that ionization of OCS is more probable for the laser pointing from the O end towards the S end. Work supported by the Natural Sciences and Engineering Research Council of Canada, the ERC-StG (Project No. 277767-TDMET), and the VKR center of excellence, QUS- COPE.

  7. Quick synthesis of highly aligned or randomly oriented nanofibrous structures composed of C60 molecules via self-assembly

    NASA Astrophysics Data System (ADS)

    Kurosu, Shunji; Fukuda, Takahiro; Maekawa, Toru

    2013-06-01

    Assemblies, which are composed of nanoparticles such as nanofibres, have been intensively studied in recent years. This has particularly been the case in the field of biomedicine, where the aim is to develop efficient methodologies for capturing and separating target biomolecules and cells and/or encouraging bio-chemical reactions, utilizing the extremely high surface area to volume ratio of assemblies. There is an urgent need for the development of a quick synthesis method of forming nanofibrous structures on the surface of biomedical microchips and devices for the investigation of the interactions between biomolecules/cells and the nanostructures. Here, we produce nanofibrous structures composed of C60 molecules, which are aligned in one direction or randomly oriented, by dissolving C60 molecules and sulphur in benzene and evaporating a droplet of the solution on a glass substrate under appropriate conditions. The synthesis time is as short as 30 s. Sulphur is extracted and nanofibres are crystallized by leaving them in supercritical carbon dioxide.

  8. Orientation and morphology of chloroaluminum phthalocyanine films grown by vapor deposition: Electrical field-induced molecular alignment

    NASA Astrophysics Data System (ADS)

    Basova, Tamara V.; Kiselev, Vitaly G.; Plyashkevich, Vladimir A.; Cheblakov, Pavel B.; Latteyer, Florian; Peisert, Heiko; Chassè, Thomas

    2011-02-01

    The electric field influence on the molecular orientation and the surface morphology of the chloroaluminum(III) phthalocyanine (AlClPc) films has been studied using polarization dependent Raman spectroscopy and atomic force microscopy. The experimental studies were supported by DFT quantum chemical computations of the AlClPc vibrational spectra and 15N isotopic shifts. The electric field of 1.4 kV mm -1 applied parallel to the substrate plane during the physical vapour deposition modified the film structure noticeable. The AlClPc molecules were aligned nearly perpendicular to the substrate surface (the mean tilt angle increased to ˜80° from ˜20° in the films grown without the electric field). The AFM images of the AlClPc films grown in the absence of electric field revealed a predominant amount of crystallites of polyhedron shape, whereas in the case of the applied electric field the surface was more ordered and consisted of the crystallites of a smoother shape.

  9. Effect of strain along C-axis NbS{sub 2}

    SciTech Connect

    Singh, Tapender Kumar, Jagdish Sastri, O. S. K. S.

    2015-05-15

    We have studied electronic properties of double layered hexagonal structure of the Niobium Di-Sulphide (2H-NbS{sub 2}) superconductor for various strains introduced along the c-axis using ab-initio calculations. The DFT calculations based on Full Potential Linearized Augmented Plane Wave (FPLAPW) method are performed using the ELK code. The total energy curve (E vs a), Density of States (DOS) and the Band structure calculations obtained in this work are matching with the earlier reports. The Pressure-Volume (P-V) diagram for 2H-NbS{sub 2} was obtained using the Equation of State(EOS) calculations, which provides the relationship between the pressure and strain applied along the c-axis. The band structures for various strains ranging from 0 percent to 10 percent along c-axis in steps of 2 percent are obtained. We note that there are increasing number of bands crossing over the Fermi energy level with increase in strain. Thus, we conclude that with increasing strain along c-axis, number of conduction bands crossing the E{sub F} increases, which gives rise to more conduction states and hence higher conductivity.

  10. Transport properties along c-axis of DyNi2B2C

    NASA Astrophysics Data System (ADS)

    Lee, W. C.

    2014-12-01

    We have measured the resistivity along c-axis ρc(H, T) of DyNi2B2C with the applied magnetic field H perpendicular to c-axis for 0 kG < H < 4 kG and temperature range 2 K < T < 300 K. From these, the superconducting upper critical field HC2(T) curve of DyNi2B2C for the c-axis was constructed and our HC2(T) curve from ρc(H, T) measurement has been compared with that from previous known ρab(H, T) result. With additional magnetization isotherms M(H, T) for H ⊥ c and H ∥ c-axis, the anisotropy in HC2(T) curves of the magnetic structure DyNi2N2C, which has the superconducting transition temperature TC is lower than the Néel temperatures TN, might be originated from the additional anisotropic magnetic Dy3+ sublattice.

  11. Growth, modulation and photoresponse characteristics of vertically aligned ZnO nanowires

    NASA Astrophysics Data System (ADS)

    Kar, J. P.; Das, S. N.; Choi, J. H.; Lee, T. I.; Seo, J.; Lee, T.; Myoung, J. M.

    2011-03-01

    Vertically aligned, c-axis oriented zinc oxide (ZnO) nanowires were grown on Si substrate by metal organic chemical vapor deposition (MOCVD) technique, where sputtered aluminum nitride (AlN) film was used as an intermediate layer and thermally evaporated barium fluoride (BaF 2) film as a sacrificial layer. The aspect ratio and density of the nanowires were also varied using only Si microcavity without any interfacial or sacrificial layer. The UV detectors inside the microcavity have shown the higher on-off current ratio and fast photoresponse characteristics. The photoresponse characteristics were significantly varied with the aspect ratio and the density of nanowires.

  12. In-plane and c-axis optical spectroscopy study on 122 Fe-pnictides

    NASA Astrophysics Data System (ADS)

    Wang, Nan Lin

    2011-03-01

    I present the in-plane and the c-axis optical spectroscopy investigations on 122 Fe-pnictides. For the parent compound BaFe 2 As 2 , the in-plane measurement revealed two different energy gaps in the SDW state, whereas for the c-axis polarized measurement only the energy gap at smaller energy scale could be clearly observed. We suggest different driving mechanisms for the formation of the two energy gaps. The large energy gap is caused by the nesting between disconnected 2D cylinder-like electron and hole Fermi surfaces. It is the main driving force for the SDW instability. The small energy gap is the one formed on the 3D Fermi surface due to the presence of reduced magnetic Brillouin zone which crosses the 3D Fermi surface. It is the consequence of the establishment of the magnetic order. For the doped superconducting 122 samples, the in-plane optical measurement revealed a formation of full superconducting energy gap, whereas the c-axis optical measurement indicated a large residual quasiparticle population down to very low temperature. Those quasiparticles contribute specifically to the c-axis transport. We suggest that there exist horizontal nodes in the superconducting gap in regions of the 3D Fermi surface that contribute dominantly to the c-axis optical conductivity. Work done with Z. G. Chen, W. Z. Hu, B. Cheng, G. Li, J. Dong, T. Dong, R. H. Yuan, P. Zheng, G. F. Chen, J. L. Luo, Z. Fang, X. Dai, C. L. Zhang and P. Dai.

  13. THE BANANA PROJECT. IV. TWO ALIGNED STELLAR ROTATION AXES IN THE YOUNG ECCENTRIC BINARY SYSTEM EP CRUCIS: PRIMORDIAL ORIENTATION AND TIDAL ALIGNMENT

    SciTech Connect

    Albrecht, Simon; Winn, Joshua N.; Setiawan, Johny; Torres, Guillermo; Fabrycky, Daniel C.

    2013-04-10

    With observations of the EP Cru system, we continue our series of measurements of spin-orbit angles in eclipsing binary star systems, the BANANA project (Binaries Are Not Always Neatly Aligned). We find a close alignment between the sky projections of the rotational and orbital angular momentum vectors for both stars ({beta}{sub p} = -1. Degree-Sign 8 {+-} 1. Degree-Sign 6 and |{beta}{sub s}| < 17 Degree-Sign ). We also derive precise absolute dimensions and stellar ages for this system. The EP Cru and DI Her systems provide an interesting comparison: they have similar stellar types and orbital properties, but DI Her is younger and has major spin-orbit misalignments, raising the question of whether EP Cru also had a large misalignment at an earlier phase of evolution. We show that tidal dissipation is an unlikely explanation for the good alignment observed today, because realignment happens on the same timescale as spin-orbit synchronization, and the stars in EP Cru are far from synchronization (they are spinning nine times too quickly). Therefore it seems that some binaries form with aligned axes, while other superficially similar binaries are formed with misaligned axes.

  14. Contrôle de l'orientation et de l'alignement moléculaire par un train d'impulsions soudaines

    NASA Astrophysics Data System (ADS)

    Sugny, D.

    2006-10-01

    Les récents progrès technologiques dans le domaine des Lasers permettent d'envisager le contrôle de nombreux processus quantiques jouant un rôle dans une variété de problèmes s'étendant de la réactivité chimique à l'information quantique. Dans ce contexte, nous nous sommes intéressés au contrôle de l'orientation ou de l'alignement moléculaire en utilisant un train d'impulsions soudaines. Nous avons défini des états cibles qui maximisent à la fois l'orientation ou l'alignement et sa durée dans le temps et montré comment atteindre ces états à l'aide de stratégie systématique ou optimisée

  15. Ion imaging studies of Cl(2P3/2) fragments arising in the visible photolysis of BrCl: Measurement of orientation, alignment, and alignment-free anisotropy parameters

    NASA Astrophysics Data System (ADS)

    Wouters, Eloy R.; Beckert, Marco; Russell, Lucy J.; Rosser, Keith N.; Orr-Ewing, Andrew J.; Ashfold, Michael N. R.; Vasyutinskii, Oleg S.

    2002-08-01

    The photodissociation dynamics of jet-cooled BrCl molecules have been investigated at four different wavelengths in the range 425-485 nm by high-resolution velocity map ion imaging. Four images of the Cl(2P3/2) atomic fragments are recorded at each photolysis wavelength with the probe laser polarization, respectively, linearly aligned and vertical (i.e., perpendicular to the detection axis), right circularly polarized, horizontally linearly polarized (i.e., parallel to the detection axis) and left circularly polarized on successive laser shots, thereby ensuring automatic mutual self-normalization. Appropriate linear combinations of these images allow quantification of the angular momentum alignment of the Cl(2P3/2)o fragments [i.e., the correlation between their recoil velocity (v) and their electronic angular momentum (J)] in terms of the alignment anisotropy parameters s2, alpha2, eta2, and gamma2, and determination of the "alignment-free" recoil anisotropy parameter, beta0, as a function of parent excitation wavelength. Both incoherent and coherent contributions to the alignment are identified, with both simultaneous parallel and perpendicular excitations to the B 3Pi(0+) and C 1Pi(1 states and excitations to the Omega]=[plus-or-minus1 components of the C state contributing to the latter. The deduced values of the alignment-free beta parameters indicate (wavelength dependent) contributions from both parallel and perpendicular parent absorptions in this wavelength range. Such a conclusion accords with approximate deconvolutions of the parent absorption spectrum that are currently available, and with determinations of the orientation parameter gamma1' obtained by fitting the difference image obtained when using left and right circularly polarized radiation to probe the ground state Cl atoms arising in the 480.63 nm photodissociation of BrCl when the photolysis laser radiation is polarized linearly at 45deg to the detection axis.

  16. Quartz c-axis evidence for deformation characteristics in the Sanandaj-Sirjan metamorphic belt, Iran

    NASA Astrophysics Data System (ADS)

    Samani, Babak

    2013-05-01

    Quartz c-axis fabric, finite strain, and kinematic vorticity analyses were carried out in well-exposed quartz mylonites to investigate the heterogeneous nature of ductile deformation within the Eghlid deformed area in the High Pressure-Low Temperature (HP-LT) Sanandaj-Sirjan metamorphic belt (Zagros Mountains, Iran). This belt belongs to a sequence of tectonometamorphic complexes with low- to high-grade metamorphic rocks affected by a polyphase deformation history. Asymmetric quartz c-axis fabrics (type I) confirm a localized top-to-the-southeast sense of shear. Quantitative finite strain analysis in the XZ, XY and YZ principal planes of the finite strain ellipsoid demonstrate that the strain ratio increases towards the thrust planes of the Zagros Thrust System. Kinematic vorticity analysis of deformed quartz grains showed sequential variation in the kinematic vorticity number from ˜0.5 to ˜0.8 between the thrust sheets. Such vorticity numbers show that both simple and pure shear components contribute to the deformation. Our results show that simple shear dominated deformation near the thrust faults, and pure shear dominated deformation far from them. Quartz c-axis opening angles suggest deformation temperatures range between 450° ± 50 °C and 600° ± 50 °C, which yield greenschist to amphibolite facies conditions during ductile deformation.

  17. C-axis Transport Properties of DyNi2 B2 C

    NASA Astrophysics Data System (ADS)

    Lee, W. C.

    2014-03-01

    The resistivity along c-axis ρc(H,T) of DyNi2B2C have been measured with the applied magnetic field H perpendicular and parallel to c-axis, 0 kG c-axis were constructed for each magnetic fields and our HC2(T) curves from ρc(H,T) measurement have been compared with those from previous known ρab(H,T) results. Since RNi2N2C (R = non magnetic rare earth element) has isotropic electronic structure and properties, the anisotropy in HC2(T) curves of the magnetic DyNi2N2C, which has the superconducting transition temperature, TC, is lower than the Néel temperatures, TN, is thought to be originated from the anisotropic magnetic Dy +3 sublattice.

  18. Microstructure dependence of the c-axis critical current density in second-generation YBCO tapes.

    SciTech Connect

    Jia, Y.; Welp, U.; Crabtree, G. W.; Kwok, W. K.; Malozemoff, A. P.; Rupich, M. W.; Fleshler, S.; Clem, J. R.

    2011-10-01

    C-axis current flow in high temperature superconductor (HTS) tape-shaped wires arises in configurations where the local wire axis is not perpendicular to the local magnetic field, such as in power cables with helically wound HTS tapes. The c-axis critical current density J{sub c}{sup c} has been recently found to be orders of magnitude lower than the ab-plane critical current density J{sub c}{sup ab}. Here we report on J{sub c}{sup c} (77 K, sf) values of various YBa{sub 2}Cu{sub 3}O{sub 7}-based (YBCO) tapes with different microstructures. Our results show that the value of J{sub c}{sup c} (77 K, sf) decreases significantly with increasing concentration of ab-plane stacking faults in YBCO thin films and that the critical current anisotropy {gamma} = J{sub c}{sup ab}/J{sub c}{sup c} can reach values as high as 2070, implying that in the highest-anisotropy tape, {approx}20% of the tape width carries c-axis current in a helically wound power cable.

  19. Microstructure dependence of the c-axis critical current density in second generation YBCO tapes

    SciTech Connect

    Jia, Y. Welp, U. Crabtree, G.W.; Kwok, W.K.; Malozemoff, A.P.; Rupich, M.W.; Fleshler, S.; Clem, J.R.

    2011-10-31

    C-axis current flow in high temperature superconductor (HTS) tape-shaped wires arises in configurations where the local wire axis is not perpendicular to the local magnetic field, such as in power cables with helically wound HTS tapes. The c-axis critical current density J{sub c}{sup c} has been recently found to be orders of magnitude lower than the ab-plane critical current density J{sub c}{sup ab}. Here we report on J{sub c}{sup c} (77 K, sf) values of various YBa{sub 2}Cu{sub 3}O{sub 7}-based (YBCO) tapes with different microstructures. Our results show that the value of J{sub c}{sup c} (77 K, sf) decreases significantly with increasing concentration of ab-plane stacking faults in YBCO thin films and that the critical current anisotropy {gamma} = J{sub c}{sup ab}/J{sub c}{sup c} can reach values as high as 2070, implying that in the highest-anisotropy tape, {approx}20% of the tape width carries c-axis current in a helically wound power cable.

  20. C-axis critical current density of second-generation YBCO tapes.

    SciTech Connect

    Jia, Y.; Hua, J.; Crabtree, G. W.; Kwok, W. K.; Welp, U.; Malozemoff, A. P.; Rupich, M.; Fleshler, S.; Materials Science Division; American Superconductor Corp.

    2010-10-01

    We report on measurements of the temperature and field dependence of the c-axis critical current density (J{sub c}{sup c}) obtained on mesa structures that were patterned into the YBCO layer of second-generation HTS tapes. We find the J{sub c}{sup c}-values of {approx}4 kA cm{sup -2} at 77 K and self-field, corresponding to an unexpectedly high anisotropy in the critical current density J{sub c}{sup ab}/J{sub c}{sup c} of 500-600. C-axis current flow is expected to arise in applications such as the helically wound wires in HTS cables. A simple estimate is given of the fraction of tape width for such a c-axis flow; while in our samples this fraction is approximately 5% for a typical geometry, the fraction will grow linearly with increasing current density anisotropy and could affect the current-carrying ability of the tape.

  1. C-Axis critical current density of second-generation YBCO tapes

    SciTech Connect

    Jia, Y.; Hua, J.; Crabtree, G.W.; Kwok, W.K.; Welp, U.; Malozemoff, A.P.; Rupich, M.; Fleshler, S.

    2010-10-21

    We report on measurements of the temperature and field dependence of the c-axis critical current density (Jcc) obtained on mesa structures that were patterned into the YBCO layer of second-generation HTS tapes. We find the Jcc—values of ~ 4 kA cm-2 at 77 K and self-field, corresponding to an unexpectedly high anisotropy in the critical current density Jcab/Jcc of 500–600. C-axis current flow is expected to arise in applications such as the helically wound wires in HTS cables. A simple estimate is given of the fraction of tape width for such a c-axis flow; while in our samples this fraction is approximately 5% for a typical geometry, the fraction will grow linearly with increasing current density anisotropy and could affect the current-carrying ability of the tape.

  2. Substrate Heating Effect on c-Axis Texture and Piezoelectric Properties of AlN Thin Films Deposited by Unbalanced Magnetron Sputtering

    NASA Astrophysics Data System (ADS)

    Hasheminiasari, Masood; Lin, Jianliang

    2016-03-01

    Aluminum nitride (AlN) thin films with highly preferred (002) orientations have been reactively deposited by a pulsed-closed field unbalanced magnetron sputtering system using TiN/Ti as the seed/adhesion layer with various substrate temperatures. The texture, orientation and piezoelectric properties of AlN films were characterized by means of x-ray diffraction, rocking curves and laser interferometry. A Michelson laser interferometer was designed and built to obtain the converse piezoelectric response of the deposited AlN thin films. It was found that a slight substrate temperature increase would significantly affect the (002) orientation and the piezoelectric coefficient of AlN thin films compared to the coating obtained with no intentional substrate heating, while higher temperature applications on substrate deteriorated the c-axis texture of the coatings without significant improvement in the piezoelectric response of AlN films.

  3. Substrate Heating Effect on c-Axis Texture and Piezoelectric Properties of AlN Thin Films Deposited by Unbalanced Magnetron Sputtering

    NASA Astrophysics Data System (ADS)

    Hasheminiasari, Masood; Lin, Jianliang

    2016-06-01

    Aluminum nitride (AlN) thin films with highly preferred (002) orientations have been reactively deposited by a pulsed-closed field unbalanced magnetron sputtering system using TiN/Ti as the seed/adhesion layer with various substrate temperatures. The texture, orientation and piezoelectric properties of AlN films were characterized by means of x-ray diffraction, rocking curves and laser interferometry. A Michelson laser interferometer was designed and built to obtain the converse piezoelectric response of the deposited AlN thin films. It was found that a slight substrate temperature increase would significantly affect the (002) orientation and the piezoelectric coefficient of AlN thin films compared to the coating obtained with no intentional substrate heating, while higher temperature applications on substrate deteriorated the c-axis texture of the coatings without significant improvement in the piezoelectric response of AlN films.

  4. Fabrication of Aligned Conducting PPy-PLLA Fiber Films and Their Electrically Controlled Guidance and Orientation for Neurites.

    PubMed

    Zou, Yuanwen; Qin, Jiabang; Huang, Zhongbing; Yin, Guangfu; Pu, Ximing; He, Da

    2016-05-25

    Electrically conductive biomaterial scaffolds have great potential in neural tissue regeneration. In this work, an aligned conductive fibrous scaffold was prepared by electrospinning PLLA on rotating collector and chemical oxidation polymerization of pyrrole (PPy) codoped with poly(glutamic acid)/dodecyl benzenesulfonic acid sodium. The characterization results of composition, structure and mechanics of fiber films show that the existence of weak polar van der Waals' force between PPy coating and PLLA fibers. The resistivity of aligned rough PPy-PLLA fiber film (about 800 nm of fiber diameter) at the perpendicular and parallel directions is 0.971 and 0.874 Ω m, respectively. Aligned rough PPy-PLLA fiber film could guide the extension of 68% PC12 neurites along the direction of fiber axis. Under electrostimulation (ES) of 100, 200, and 400 mV/cm, median neurite lengths of differentiated PC12 on aligned fiber-films are 128, 149, and 141 μm, respectively. Furthermore, under ES of 100, 200, and 400 mV/cm, the alignment rate of neurite along the electropotential direction (angle between neurite and electropotential direction ≤10°) on random fibers film are 17, 23, and 28%, respectively, and the alignment rate of neurites along the fiber axis (angle between neurite and fiber axis ≤10°) on aligned fibers film reach to 76, 83, and 79%, respectively, indicating that the combination of ES and rough conducting aligned structure could adjust the alignment of cellular neurites along the direction of the fiber axis or electropotential. PMID:27172537

  5. Orientation dependant charge transfer at fullerene/Zn-phthalocyanine (C60/ZnPc) interface: Implications for energy level alignment and photovoltaic properties

    NASA Astrophysics Data System (ADS)

    Javaid, Saqib; Javed Akhtar, M.

    2016-08-01

    Recently, experimental results have shown that photovoltaic properties of Fullerene (C60)/Phthalocyanine based devices improve considerably as molecular orientation is changed from edge-on to face-on. In this work, we have studied the impact of molecular orientation on C60/ZnPc interfacial properties, particularly focusing on experimentally observed face-on and edge-on configuration, using density functional theory based simulations. The results show that the interfacial electronic properties are strongly anisotropic: direction of charge transfer and interface dipole fluctuates as molecular orientation is switched. As a result of orientation dependant interface dipole, difference between acceptor LUMO and donor HOMO increases as the orientation is changed from edge-on to face-on, suggesting a consequent increase in open circuit voltage (VOC). Moreover, adsorption and electronic properties indicate that the interfacial interactions are much stronger in the face-on configuration which should further facilitate the charge-separation process. These findings elucidate the energy level alignment at C60/ZnPc interface and help to identify interface dipole as the origin of the orientation dependence of VOC.

  6. Distinguishing between aligned and randomly oriented polar molecules by using a combination of strong laser field with a weak static field

    NASA Astrophysics Data System (ADS)

    Moiseyev, Nimrod; Gupta, Ashish Kumar

    2012-08-01

    The harmonic generation spectra (HGS) of two different ensembles of the same heteronuclear (polar) diatomic molecule are studied. In one ensemble the molecules are aligned (i.e. CO ↔ OC) whereas in the second ensemble the molecules are randomly distributed in different directions (and therefore not all molecules have the same orientation, e.g. CO or OC along one of the axes in the laboratory frame). Using the non-Hermitian formalism of quantum mechanics we prove that the HGS of the two ensembles consist of odd-order harmonics only, provided the photo-induced dynamics is controlled by a single resonance (metastable) state. As we show here by using the Friedrich and Herschbach approach [J. Phys. Chem. A 103, 10280 (1999); J. Chem. Phys. 111, 6157 (1999)], it is possible to distinguish between the ensemble of 'perfectly' aligned molecules and an ensemble of molecules with a random directional distribution, provided the dc-field is turned on adiabatically slow and all aligned molecules are in the same quantum state. As an illustrative numerical example the HGS of aligned and ensemble of random directional distributed CO molecules with and without dc field were computed by carrying out ab initio electronic structure calculations.

  7. Possibility of c-axis voltage steps for a cuprate superconductor in a resonant cavity

    NASA Astrophysics Data System (ADS)

    Tornes, I.; Stroud, D.

    2003-08-01

    Very anisotropic cuprate superconductors, such as BiSr2Ca2CuO8+x, when driven by currents parallel to the c axis, behave like stacks of underdamped Josephson junctions. Here, we analyze the possibility that such a stack can be caused to phase lock, to exhibit self-induced resonant voltage steps (SIRS’s), and hence to radiate coherently when placed in a suitable resonant electromagnetic cavity. We analyze this possibility using equations of motion developed to describe such SIRS’s in stacks of artificial Josephson junctions. We conclude that such steps might be observable with a suitably chosen cavity and resonant frequency.

  8. Direct synthesis of large-scale hierarchical MoS2 films nanostructured with orthogonally oriented vertically and horizontally aligned layers.

    PubMed

    Zhang, Xiaoyan; Zhang, Saifeng; Chen, Bohua; Wang, Hao; Wu, Kan; Chen, Yang; Fan, Jintai; Qi, Shen; Cui, Xiaoli; Zhang, Long; Wang, Jun

    2016-01-01

    Hierarchical MoS2 thin films nanostructured with orthogonally oriented vertically and horizontally aligned layers were designed and excellent passive Q-switching behavior in a fiber laser was demonstrated. A special solvothermal system containing a small amount of water was applied to synthesize such hierarchical MoS2 nanofilms, in which the reaction rate is carefully controlled by the diffusion rate of the sulfur precursor. Wafer-scale MoS2 thin films with hierarchical structures are formed on various substrates. Moreover, the hierarchical MoS2 thin films consisting of both vertical and horizontal layers can be tuned to possess only horizontally aligned layers by controlling the solvothermal time. To show the potential application proof-of-concept, the nonlinear optical performance of the hierarchical MoS2 was investigated. Superior passive Q-switching behavior in a fiber laser with a minimum pulse width of 2.2 μs was observed. PMID:26620263

  9. Correlation of properties with preferred orientation in coagulated and stretch-aligned single-wall carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Badaire, Stéphane; Pichot, Vincent; Zakri, Cécile; Poulin, Philippe; Launois, Pascale; Vavro, Juraj; Guthy, Csaba; Chen, Michelle; Fischer, John E.

    2004-12-01

    We report structure-property correlations in single-wall carbon nanotube (SWNT) fibers, among electrical, thermal, and chemical parameters with respect to stretch-induced preferential SWNT alignment along the fiber axis. Purified HiPco (high-pressure CO) conversion tubes are dispersed with the aid of an anionic surfactant and coagulated in the co-flowing stream of an adsorbing polymer. The fibers are then dried, rewetted under tensile load, and redried to improve the alignment. Complete removal of the polymer was assured by annealing in hydrogen at 1000°C. The degree of alignment was determined by x-ray scattering from individual fibers using a two-dimensional detector. The half width at half maximum describing the axially symmetric distribution of SWNT axes decreases linearly from 27.5° in the initial extruded fiber to 14.5° after stretching by 80%. The electrical resistivity ρ at 300K decreases overall by a factor ˜4 with stretching, for both as-spun composite and polymer-free annealed fibers. However, the temperature dependence ρ(T ) is markedly different for the two, implying different electron-transport mechanisms with and without the polymer. Thermal conductivity also improves with increasing alignment, while the absolute values are limited by the disordered network of finite length tubes and bundles. Comparisons are made with results from similar fibers spun from oleum and with magnetically aligned buckypapers.

  10. Theoretical calculations of rotationally inelastic collisions of He with NaK(A {sup 1}Σ{sup +}): Transfer of population, orientation, and alignment

    SciTech Connect

    Malenda, R. F.; Price, T. J.; Stevens, J.; Uppalapati, S. L.; Fragale, A.; Weiser, P. M.; Kuczala, A.; Hickman, A. P.; Talbi, D.

    2015-06-14

    We have performed extensive calculations to investigate thermal energy, rotationally inelastic collisions of NaK (A{sup 1}Σ{sup +}) with He. We determined a potential energy surface using a multi-reference configuration interaction wave function as implemented by the GAMESS electronic structure code, and we have performed coupled channel scattering calculations using the Arthurs and Dalgarno formalism. We also calculate the Grawert coefficients B{sub λ}(j, j′) for each j → j′ transition. These coefficients are used to determine the probability that orientation and alignment are preserved in collisions taking place in a cell environment. The calculations include all rotational levels with j or j′ between 0 and 50, and total (translational and rotational) energies in the range 0.0002–0.0025 a.u. (∼44–550 cm{sup −1}). The calculated cross sections for transitions with even values of Δj tend to be larger than those for transitions with odd Δj, in agreement with the recent experiments of Wolfe et al. (J. Chem. Phys. 134, 174301 (2011)). The calculations of the energy dependence of the cross sections and the calculations of the fraction of orientation and alignment preserved in collisions also exhibit distinctly different behaviors for odd and even values of Δj. The calculations also indicate that the average fraction of orientation or alignment preserved in a transition becomes larger as j increases. We interpret this behavior using the semiclassical model of Derouard, which also leads to a simple way of visualizing the distribution of the angles between the initial and final angular momentum vectors j and j′. Finally, we compare the exact quantum results for j → j′ transitions with results based on the simpler, energy sudden approximation. That approximation is shown to be quite accurate.

  11. Synthesis and Characterization of High c-axis ZnO Thin Film by Plasma Enhanced Chemical Vapor Deposition System and its UV Photodetector Application.

    PubMed

    Chao, Chung-Hua; Wei, Da-Hua

    2015-01-01

    In this study, zinc oxide (ZnO) thin films with high c-axis (0002) preferential orientation have been successfully and effectively synthesized onto silicon (Si) substrates via different synthesized temperatures by using plasma enhanced chemical vapor deposition (PECVD) system. The effects of different synthesized temperatures on the crystal structure, surface morphologies and optical properties have been investigated. The X-ray diffraction (XRD) patterns indicated that the intensity of (0002) diffraction peak became stronger with increasing synthesized temperature until 400 (o)C. The diffraction intensity of (0002) peak gradually became weaker accompanying with appearance of (10-10) diffraction peak as the synthesized temperature up to excess of 400 (o)C. The RT photoluminescence (PL) spectra exhibited a strong near-band-edge (NBE) emission observed at around 375 nm and a negligible deep-level (DL) emission located at around 575 nm under high c-axis ZnO thin films. Field emission scanning electron microscopy (FE-SEM) images revealed the homogeneous surface and with small grain size distribution. The ZnO thin films have also been synthesized onto glass substrates under the same parameters for measuring the transmittance. For the purpose of ultraviolet (UV) photodetector application, the interdigitated platinum (Pt) thin film (thickness ~100 nm) fabricated via conventional optical lithography process and radio frequency (RF) magnetron sputtering. In order to reach Ohmic contact, the device was annealed in argon circumstances at 450 (o)C by rapid thermal annealing (RTA) system for 10 min. After the systematic measurements, the current-voltage (I-V) curve of photo and dark current and time-dependent photocurrent response results exhibited a good responsivity and reliability, indicating that the high c-axis ZnO thin film is a suitable sensing layer for UV photodetector application. PMID:26484561

  12. Orientation-dependent energy level alignment and film growth of 2,7-diocty[1]benzothieno[3,2-b]benzothiophene (C8-BTBT) on HOPG

    NASA Astrophysics Data System (ADS)

    Lyu, Lu; Niu, Dongmei; Xie, Haipeng; Cao, Ningtong; Zhang, Hong; Zhang, Yuhe; Liu, Peng; Gao, Yongli

    2016-01-01

    Combining ultraviolet photoemission spectroscopy, X-ray photoemission spectroscopy, atomic force microscopy, and X-ray diffraction measurements, we performed a systematic investigation on the correlation of energy level alignment, film growth, and molecular orientation of 2,7-diocty[1]benzothieno[3,2-b]benzothiophene (C8-BTBT) on highly oriented pyrolytic graphite. The molecules lie down in the first layer and then stand up from the second layer. The ionization potential shows a sharp decrease from the lying down region to the standing up region. When C8-BTBT molecules start standing up, unconventional energy level band-bending-like shifts are observed as the film thickness increases. These shifts are ascribed to gradual decreasing of the molecular tilt angle about the substrate normal with the increasing film thickness.

  13. Interfacial band alignment and structural properties of nanoscale TiO2 thin films for integration with epitaxial crystallographic oriented germanium

    NASA Astrophysics Data System (ADS)

    Jain, N.; Zhu, Y.; Maurya, D.; Varghese, R.; Priya, S.; Hudait, M. K.

    2014-01-01

    We have investigated the structural and band alignment properties of nanoscale titanium dioxide (TiO2) thin films deposited on epitaxial crystallographic oriented Ge layers grown on (100), (110), and (111)A GaAs substrates by molecular beam epitaxy. The TiO2 thin films deposited at low temperature by physical vapor deposition were found to be amorphous in nature, and high-resolution transmission electron microscopy confirmed a sharp heterointerface between the TiO2 thin film and the epitaxially grown Ge with no traceable interfacial layer. A comprehensive assessment on the effect of substrate orientation on the band alignment at the TiO2/Ge heterointerface is presented by utilizing x-ray photoelectron spectroscopy and spectroscopic ellipsometry. A band-gap of 3.33 ± 0.02 eV was determined for the amorphous TiO2 thin film from the Tauc plot. Irrespective of the crystallographic orientation of the epitaxial Ge layer, a sufficient valence band-offset of greater than 2 eV was obtained at the TiO2/Ge heterointerface while the corresponding conduction band-offsets for the aforementioned TiO2/Ge system were found to be smaller than 1 eV. A comparative assessment on the effect of Ge substrate orientation revealed a valence band-offset relation of ΔEV(100) > ΔEV(111) > ΔEV(110) and a conduction band-offset relation of ΔEC(110) > ΔEC(111) > ΔEC(100). These band-offset parameters are of critical importance and will provide key insight for the design and performance analysis of TiO2 for potential high-κ dielectric integration and for future metal-insulator-semiconductor contact applications with next generation of Ge based metal-oxide field-effect transistors.

  14. Molecular orientation and the infrared dichroism of a chiral smectic liquid crystal in a homogeneously aligned cell at different temperature and bias fields.

    PubMed

    Sigarev, A A; Vij, J K; Lewis, R A; Hird, M; Goodby, J W

    2003-09-01

    The molecular orientation and the dichroic behavior of the vibrational bands of a homogeneously aligned helical cell containing chiral smectic liquid crystal (R)-(-)-1-methylheptyl 4-(4(')-dodecyloxybiphenyl-4-ylcarbonyloxy)-3-fluorobenzoate are studied at various temperatures as a function of the bias field. These temperatures correspond to the various phase states of the sample at zero field. For those bands that exhibit significant dichroism, the field dependencies of the dichroic parameters (the dichroic ratio and the polarization angle of maximum absorbance) are found to be dependent on temperature, phase state, and helical unwinding. For the SmA* and SmC(*)(alpha) phases, the phenyl band dichroic ratio and the corresponding orientational order parameter are found to be almost independent of the bias field. The temperature dependence of the orientational order for zero field is discussed by taking into account the structures of the phases and the molecular tilt angles. The field dependencies of the phenyl band dichroic parameters for the SmC(*)(A) and SmC(*)(gamma) phases yield results about the distribution of directors in the layers of their unit cells and the state of helical unwinding. The azimuthal orientational distribution function of the carbonyl transition moments with respect to the long molecular axis has been determined. It is found that the degrees of the polar and quadrupolar biasing increase with decrease in temperature and the azimuthal biasing angle for the chiral carbonyl group increases significantly with a reduction in temperature. PMID:14524788

  15. Bilayer splitting and c-axis coupling in CMR bilayer manganites

    SciTech Connect

    Jozwiak, Chris; Graf, Jeff; Zhou, Shuyun; Bostwick, Aaron; Rotenberg, Eli; Zheng, Hong; Mitchell, John; Lanzara, Alessandra

    2009-09-03

    By performing angle-resolved photoemission spectroscopy of the bilayer colossal magnetoresistive (CMR) manganite, La2-2xSr1+2xMn2O7, we provide the complete mapping of the Fermi-level spectral weight topology. Clear and unambiguous bilayer splitting of the in-plane 3dx2-y2 band, mapped throughout the Brillouin zone, and the full mapping of the 3d3z2-r2 band are reported. Peculiar doping and temperature dependencies of these bands imply that as transition from the ferromagnetic metallic phase approaches, either as a function of doping or temperature, coherence along the c-axis between planes within the bilayer is lost, resulting in reduced interplane coupling. These results suggest that interplane coupling plays a large role in the CMR transition.

  16. Adaptation of BAp crystal orientation to stress distribution in rat mandible during bone growth

    NASA Astrophysics Data System (ADS)

    Nakano, T.; Fujitani, W.; Ishimoto, T.; Umakoshi, Y.

    2009-05-01

    Biological apatite (BAp) c-axis orientation strongly depends on stress distribution in vivo and tends to align along the principal stress direction in bones. Dentulous mandible is subjected to a complicated stress condition in vivo during chewing but few studies have been carried out on the BAp c-axis orientation; so the adaptation of BAp crystal orientation to stress distribution was examined in rat dentulous mandible during bone growth and mastication. Female SD rats 4 to 14 weeks old were prepared, and the bone mineral density (BMD) and BAp crystal orientation were analyzed in a cross-section of mandible across the first molar focusing on two positions: separated from and just under the tooth root on the same cross-section perpendicular to the mesiodistal axis. The degree of BAp orientation was analyzed by a microbeam X-ray diffractometer using Cu-Kα radiation equipped with a detector of curved one-dimensional PSPC and two-dimensional PSPC in the reflection and transmission optics, respectively. BMD quickly increased during bone growth up to 14 weeks, although it was independent of the position from the tooth root. In contrast, BAp crystal orientation strongly depended on the age and the position from the tooth root, even in the same cross-section and direction, especially along the mesiodistal and the biting axes. With increased biting stress during bone growth, the degree of BAp orientation increased along the mesiodistal axis in a position separated from the tooth root more than that near the tooth root. In contrast, BAp preferential alignment clearly appeared along the biting axis near the tooth root. We conclude that BAp orientation rather than BMD sensitively adapts to local stress distribution, especially from the chewing stress in vivo in the mandible.

  17. Bio-inspired configurable multiscale extracellular matrix-like structures for functional alignment and guided orientation of cells.

    PubMed

    Bae, Won-Gyu; Kim, Jangho; Choung, Yun-Hoon; Chung, Yesol; Suh, Kahp Y; Pang, Changhyun; Chung, Jong Hoon; Jeong, Hoon Eui

    2015-11-01

    Inspired by the hierarchically organized protein fibers in extracellular matrix (ECM) as well as the physiological importance of multiscale topography, we developed a simple but robust method for the design and manipulation of precisely controllable multiscale hierarchical structures using capillary force lithography in combination with an original wrinkling technique. In this study, based on our proposed fabrication technology, we approached a conceptual platform that can mimic the hierarchically multiscale topographical and orientation cues of the ECM for controlling cell structure and function. We patterned the polyurethane acrylate-based nanotopography with various orientations on the microgrooves, which could provide multiscale topography signals of ECM to control single and multicellular morphology and orientation with precision. Using our platforms, we found that the structures and orientations of fibroblast cells were greatly influenced by the nanotopography, rather than the microtopography. We also proposed a new approach that enables the generation of native ECM having nanofibers in specific three-dimensional (3D) configurations by culturing fibroblast cells on the multiscale substrata. We suggest that our methodology could be used as efficient strategies for the design and manipulation of various functional platforms, including well-defined 3D tissue structures for advanced regenerative medicine applications. PMID:26285083

  18. Pulse-fluence-specified optimal control simulation with applications to molecular orientation and spin-isomer-selective molecular alignment

    SciTech Connect

    Yoshida, Masataka; Nakashima, Kaoru; Ohtsuki, Yukiyoshi

    2015-12-31

    We propose an optimal control simulation with specified pulse fluence and amplitude. The simulation is applied to the orientation control of CO molecules to examine the optimal combination of THz and laser pulses, and to discriminate nuclear-spin isomers of {sup 14}N{sub 2} as spatially anisotropic distributions.

  19. C-axis electrical resistivity of PrO1-aFaBiS2 single crystals

    NASA Astrophysics Data System (ADS)

    Nagao, Masanori; Miura, Akira; Watauchi, Satoshi; Takano, Yoshihiko; Tanaka, Isao

    2015-08-01

    The high anisotropy in RO1-aFaBiS2 (R denotes a rare-earth element) superconductors demonstrates their potential use as intrinsic Josephson junctions, considering the weak coupling among BiS2-PrO(F)-BiS2 (superconducting-normal-superconducting) layers along the c-axis. We grew PrO1-aFaBiS2 single crystals using CsCl/KCl flux. The superconducting anisotropies of the grown single crystals were estimated to be approximately 40-50 from the effective mass model. The c-axis transport properties were characterized using single-crystal s-shaped intrinsic Josephson junctions with a focused ion beam. Along the c-axis, the crystals showed zero resistivity at 2.7 K and a critical current density of 1.33 × 103 A/cm2 at 2.0 K. The current-voltage curve along the c-axis displayed hysteresis. The c-axis transport measurements under a magnetic field parallel to the ab-plane revealed a “lock-in” state due to the Josephson vortex flow, indicating that BiS2 superconductors are promising candidates for intrinsic Josephson junctions.

  20. Interfacial band alignment and structural properties of nanoscale TiO{sub 2} thin films for integration with epitaxial crystallographic oriented germanium

    SciTech Connect

    Jain, N.; Zhu, Y.; Hudait, M. K.; Maurya, D.; Varghese, R.; Priya, S.

    2014-01-14

    We have investigated the structural and band alignment properties of nanoscale titanium dioxide (TiO{sub 2}) thin films deposited on epitaxial crystallographic oriented Ge layers grown on (100), (110), and (111)A GaAs substrates by molecular beam epitaxy. The TiO{sub 2} thin films deposited at low temperature by physical vapor deposition were found to be amorphous in nature, and high-resolution transmission electron microscopy confirmed a sharp heterointerface between the TiO{sub 2} thin film and the epitaxially grown Ge with no traceable interfacial layer. A comprehensive assessment on the effect of substrate orientation on the band alignment at the TiO{sub 2}/Ge heterointerface is presented by utilizing x-ray photoelectron spectroscopy and spectroscopic ellipsometry. A band-gap of 3.33 ± 0.02 eV was determined for the amorphous TiO{sub 2} thin film from the Tauc plot. Irrespective of the crystallographic orientation of the epitaxial Ge layer, a sufficient valence band-offset of greater than 2 eV was obtained at the TiO{sub 2}/Ge heterointerface while the corresponding conduction band-offsets for the aforementioned TiO{sub 2}/Ge system were found to be smaller than 1 eV. A comparative assessment on the effect of Ge substrate orientation revealed a valence band-offset relation of ΔE{sub V}(100) > ΔE{sub V}(111) > ΔE{sub V}(110) and a conduction band-offset relation of ΔE{sub C}(110) > ΔE{sub C}(111) > ΔE{sub C}(100). These band-offset parameters are of critical importance and will provide key insight for the design and performance analysis of TiO{sub 2} for potential high-κ dielectric integration and for future metal-insulator-semiconductor contact applications with next generation of Ge based metal-oxide field-effect transistors.

  1. Millimeter wave surface resistance of grain-aligned Y1Ba2Cu3O(x) bulk material

    NASA Technical Reports Server (NTRS)

    Wosik, J.; Kranenburg, R. A.; Wolfe, J. C.; Selvamanickam, V.; Salama, K.

    1990-01-01

    Measurements are reported of the millimeter-wave surface resistance of grain-aligned YBa2Cu3O(x) bulk material grown by a liquid-phase process. The measurements were performed by replacing the endplate of a TE(011) cylindrical copper cavity with the superconducting sample. Surface resistance was measured for samples with surfaces oriented perpendicular and parallel to the c-axis of the grains. For the parallel configuration, the surface resistance at 77 K and 80 GHz is given. For a very well-aligned sample with a very low density of Y2BaCuO(y) precipitates, measured in the perpendicular configuration, the transition width (10-90 percent) is about 2 K and the surface resistance is derived at 88 K. The effect of microstructure on surface resistance is discussed.

  2. Millimeter wave surface resistance of grain-aligned Y1Ba2Cu3O(x) bulk material

    NASA Technical Reports Server (NTRS)

    Wosik, J.; Kranenburg, R. A.; Wolfe, J. C.; Selvamanickam, V.; Salama, K.

    1991-01-01

    Measurements of the millimeter wave surface resistance of grain-aligned YBa2Cu3O(x) bulk material grown by a liquid phase process are reported. The measurements were performed by replacing the endplate of a TE011 cylindrical copper cavity with the superconducting sample. Surface resistance was measured for samples with surfaces oriented perpendicular and parallel to the c-axis of the grains. It is shown that, for the parallel configuration, the surface resistance at 77 K and 80 GHz is typically near 100 milliohms. For a very well-aligned sample with a very low density of Y2BaCuO(y) precipitates, measured in the perpendicular configuration, the transition width (10-90 percent) is about 2 K, and the surface resistance is less than 50 milliohms at 88 K. The effect of microstructure on surface resistance is discussed.

  3. In situ Pulsed Laser Deposition of C-Axis Oriented MgB2 Films and Their Characterization

    NASA Technical Reports Server (NTRS)

    Shinde, Sanjay; Lakew, Brook; Ogale, S. B.; Kulkarni, V. N.; Kale, S. N.; Venkatesan, T.

    2004-01-01

    The recent discovery of an intermetallic superconductor MgB2 has renewed interest in the area of superconductivity not only because of fundamental understanding of superconductivity but also due to its potential applicability in devices such as thermal detectors. Considerable amount of research has been devoted to obtain MgB2 films by an all in situ growth technique. We have grown MgB2 thin films by an all in situ pulsed laser deposition process from pure B and Mg targets. Ultrathin layers of B and Mg were deposited in a multilayer configuration. Hundreds of such Mg-B bilayers with a capping Mg layer on the top were deposited on sapphire substrate. These depositions were done in high vacuum (approx. 10(exp -7) Torr) and at room temperature. After deposition, such a configuration was annealed at high temperature for a short time in a forming gas (4% H2 in Ar). The best films, obtained by this procedure, showed superconducting transition temperature approx. 30 K. These films have been characterized by x-ray diffraction, Rutherford Backscattering Spectrometry, AC susceptibility-, resistivity- (with and without magnetic field) and 1/f noise-measurements. The physical properties of these films will be presented and discussed.

  4. Electronic Alignment of HYDROGEN(2P) from Oriented Excited State Dihydrogen Cation Produced in 4.0 KEV Dihydrogen Cation Collisions with Helium

    NASA Astrophysics Data System (ADS)

    Calabrese, Dominic

    The electronic alignment of H(2p) from oriented (H{2}{+})^ {*} produced in 4.0 keV H {2}{+} collisions with helium is investigated for a variety of center-of-mass energies of the fragment particles. The experiment is performed by measuring the polarization of L_alpha in coincidence with the charged particle scattered at a specific laboratory scattering angle. The laboratory scattering angle and the laboratory energy of the charged particle not only specifies the instantaneous orientation of the parent molecule relative to the incident beam velocity, but also the center-of-mass energy of the fragment particles. Photon and proton detection systems were specially designed and implemented to increase data collection efficiency. This was important because of the time-consuming nature of the photon-particle coincidence method. In special cases, symmetry arguments for the collision system are employed in order to qualitatively assess and predict the characteristics of the nascent charge cloud. These arguments also help one to qualitatively predict the possible symmetries of the excited states of the parent molecule. The results are discussed in order to determine the efficacy of existing models for the (HeH_2) ^+ complex.

  5. Origin of the c-Axis Tilt Occurring During the Lateral Epitaxial Overgrowth of GaN

    NASA Astrophysics Data System (ADS)

    Kuan, T. S.; Inoki, C. K.; Zhang, R.; Gu, S.; Kuech, T. F.

    2001-03-01

    A large angle c-axis tilt has often been observed in GaN layers grown by lateral epitaxial overgrowth (LEO) through narrow windows defined on a seed layer. The c-axis tilt generates vertical tilt boundaries at the coalescence of growth facets. To investigate the defect mechanisms responsible for the onset of c-axis tilt, a series of GaN LEO samples was grown using the hydride vapor phase epitaxy (HVPE) technique and examined by transmission electron microscopy (TEM). Cross sectional TEM images indicate that as LEO proceeds from triangular-shaped ridges originally grown over the windows, all edge-type threading dislocations propagated from the seed layer bend into screw type and glide on the c plane. Plan-view TEM observations reveal further that to relax the twist/shear strain in the LEO regions, these screw dislocations collectively make another 90^o bend again, forming arrays of edge dislocations parallel to the mask edge. The number of dislocations in the arrays can account for the amount of crystal tilt observed. The c-axis tilt is thus a stress-driven phenomenon dictated by the growth window geometry, and is much less influenced by the growth parameters.

  6. Origin of the c-axis ultraincompressibility of Mo2GaC above about 15 GPa from first principles

    NASA Astrophysics Data System (ADS)

    Qing-He, Gao; Zhi-Jun, Xu; Ling, Tang; Jin, Li; An, Du; Yun-Dong, Guo; Ze-Jin, Yang

    2016-01-01

    The mechanical properties and structural evolution of Mo2GaC are calculated by first-principles under pressure. Our results unexpectedly found that the c axis is always stiffer than a axis within 0-100 GPa. An ultraincompressibility of c axis within 15-60 GPa is observed, with a contraction of about 0.2 Å, slightly larger than that of a axis (0.14 Å). The abnormal expansion of c axis and the fast decrease in a axis above about 15 GPa and 70 GPa failed to induce the structural instability, whereas such behavior caused the elastic softening in many mechanical quantities. The shrinkage anomaly of c axis is closely reflected by the internal coordinate (u) shift of Mo atom as it shows three different slopes within 0-15 GPa, 20-60 GPa, and 70-100 GPa, respectively. The longest Mo-Mo bond is responsible for the unusual shrinkage of c-axis under pressure as they experience nearly identical pressure dependences, whereas the a axis presents certain response with the variation of C-Mo bond particularly at 70 GPa. The electronic properties are investigated, including the energy band and density of states, and so on. At G point of K-M line, the energy decreases at 10 GPa first and increases at 30 GPa subsequently, the critical point is at about 15 GPa, with respective values of -0.17 of 0 GPa, -0.18 of 10 GPa, -0.16 of 15 GPa, and -0.13 of 30 GPa, respectively. This alternative energy change of G point, which is the symmetry center of the rhombic parallelogram of Ga atoms and the midpoint of the two bonded Mo atoms, convincingly reveal the origin of the anomalous ultraincompressibility of c axis as the Mo-Mo bond length shrinkage has to overcome the increasing energy barrier height. The Mo-Mo bond population and the electronegativity investigations of the Mo atom further reveal the most likely origin of the ultraincompressibility of c axis. This interesting result expects further experimental confirmation as this is the first nanolaminate ceramics compound presenting quite

  7. A new empirical calibration of the quartz c-axis fabric opening-angle deformation thermometer

    NASA Astrophysics Data System (ADS)

    Faleiros, F. M.; Moraes, R.; Pavan, M.; Campanha, G. A. C.

    2016-03-01

    The opening-angle of quartz c-axis fabrics (OA) is strongly temperature dependent and has proven to be a powerful deformation thermometer for natural metamorphic rocks. Previous considerations of empirical data have identified a linear correlation between OA and temperature between 250 and 650 °C, and no correlation above 650 °C. However, possible effects of pressure have not been investigated. We expanded the data set of OA versus temperature, including data from rocks deformed over 300-1050 °C and 2.5-15 kbar. Disregarding possible effects of pressure, the OA-temperature relationship can be described by two linear correlations for the intervals ~ 250-650 °C and ~ 650-1050 °C: The change on the curve slope of the OA-temperature relationship correlates approximately to the low- to high-quartz transition and to changes in the dynamic recrystallization mechanism from subgrain rotation to grain boundary migration. The available data suggest that pressure has a secondary effect accompanying the major temperature dependence of OA, which is particularly important for temperatures above 650 °C, where the correlation between OA and temperature is less pronounced. For fixed pressures, the OA has logarithmic relationships with temperature over the range 250-1050 °C. The following thermometer equation is formulated from a multiple regression: An uncertainty of ± 50 °C is inherited from the petrological temperature estimates of the natural samples. The data suggest the gradual increasing importance of prism [c] slip relative to < a > slip in quartz with rising temperature. Under conditions of 'average' geological strain rate and water weakening, prism [c] slip dominates for deformation above ~ 700 °C.

  8. Abnormal arrangement of a collagen/apatite extracellular matrix orthogonal to osteoblast alignment is constructed by a nanoscale periodic surface structure.

    PubMed

    Matsugaki, Aira; Aramoto, Gento; Ninomiya, Takafumi; Sawada, Hiroshi; Hata, Satoshi; Nakano, Takayoshi

    2015-01-01

    Morphological and directional alteration of cells is essential for structurally appropriate construction of tissues and organs. In particular, osteoblast alignment is crucial for the realization of anisotropic bone tissue microstructure. In this article, the orientation of a collagen/apatite extracellular matrix (ECM) was established by controlling osteoblast alignment using a surface geometry with nanometer-sized periodicity induced by laser ablation. Laser irradiation induced self-organized periodic structures (laser-induced periodic surface structures; LIPSS) with a spatial period equal to the wavelength of the incident laser on the surface of biomedical alloys of Ti-6Al-4V and Co-Cr-Mo. Osteoblast orientation was successfully induced parallel to the grating structure. Notably, both the fibrous orientation of the secreted collagen matrix and the c-axis of the produced apatite crystals were orientated orthogonal to the cell direction. To the best of our knowledge, this is the first report demonstrating that bone tissue anisotropy is controllable, including the characteristic organization of a collagen/apatite composite orthogonal to the osteoblast orientation, by controlling the cell alignment using periodic surface geometry. PMID:25453944

  9. Controlling BaZrO3 nanostructure orientation in YBa2Cu3O{}_{7-\\delta } films for a three-dimensional pinning landscape

    NASA Astrophysics Data System (ADS)

    Wu, J. Z.; Shi, J. J.; Baca, F. J.; Emergo, R.; Wilt, J.; Haugan, T. J.

    2015-12-01

    The orientation phase diagram of self-assembled BaZrO3 (BZO) nanostructures in c-oriented YBa2Cu3O{}7-δ (YBCO) films on flat and vicinal SrTiO3 substrates was studied experimentally with different dopant concentrations and vicinal angles and theoretically using a micromechanical model based on the theory of elasticity. The organized BZO nanostructure configuration was found to be tunable, between c-axis to ab-plane alignment, by the dopant concentration in the YBCO film matrix strained via lattice mismatched substrates. The correlation between the local strain caused by the BZO doping and the global strain on the matrix provides a unique approach for controllable growth of dopant nanostructure landscapes. In particular, a mixed phase of the c-axis-aligned nanorods and the ab-plane-aligned planar nanostructures can be obtained, leading to a three-dimensional pinning landscape with single impurity doping and much improved J c in almost all directions of applied magnetic field.

  10. Alignment-to-orientation conversion in a magnetic field at nonlinear excitation of the D2 line of rubidium: Experiment and theory

    NASA Astrophysics Data System (ADS)

    Auzinsh, M.; Berzins, A.; Ferber, R.; Gahbauer, F.; Kalvans, L.; Mozers, A.; Spiss, A.

    2015-05-01

    We studied alignment-to-orientation conversion caused by excited-state level crossings in a nonzero magnetic field of both atomic rubidium isotopes. Experimental measurements were performed on the transitions of the D2 line of rubidium. These measured signals were described by a theoretical model that takes into account all neighboring hyperfine transitions, the mixing of magnetic sublevels in an external magnetic field, the coherence properties of the exciting laser radiation, and the Doppler effect. In the experiments, laser-induced fluorescence components were observed at linearly polarized excitation and their difference was taken afterwards. By observing the two oppositely circularly polarized components, we were able to see structures not visible in the difference graphs, which give deeper insight into the processes responsible for these signals. We studied how these signals are dependent on intensity and how they are affected when the exciting laser is tuned to different hyperfine transitions. The comparison between experiment and theory was carried out fulfilling the nonlinear absorption conditions. The theoretical curves described the experimental measurements satisfactorily, reproducing even small features in the shapes of the curves.

  11. Orientational coupling between the vortex lattice and the crystalline lattice in a weakly pinned Co0.0075NbSe2 single crystal

    NASA Astrophysics Data System (ADS)

    Ganguli, Somesh Chandra; Singh, Harkirat; Ganguly, Rini; Bagwe, Vivas; Thamizhavel, Arumugam; Raychaudhuri, Pratap

    2016-04-01

    We report experimental evidence of strong orientational coupling between the crystal lattice and the vortex lattice in a weakly pinned Co-doped NbSe2 single crystal through direct imaging using low temperature scanning tunneling microscopy/spectroscopy. When the magnetic field is applied along the six-fold symmetric c-axis of the NbSe2 crystal, the basis vectors of the vortex lattice are preferentially aligned along the basis vectors of the crystal lattice. The orientational coupling between the vortex lattice and crystal lattice becomes more pronounced as the magnetic field is increased. This orientational coupling enhances the stability of the orientational order of the vortex lattice, which persists even in the disordered state at high fields where dislocations and disclinations have destroyed the topological order. Our results underpin the importance of crystal lattice symmetry on the vortex state phase diagram of weakly pinned type II superconductors.

  12. Variation in the c-axis conductivity of multi-layer graphene due to H2 exposure.

    PubMed

    Kim, Jaekyung; Kwak, Cheol Hwan; Jung, Woochan; Huh, Yun Suk; Kim, Byung Hoon

    2016-06-21

    The variation of the c-axis conductivity of a multilayer graphene (MLG) as a function of H2 pressure from vacuum to 20 bar has been investigated. MLG was connected to the electrodes vertically using a wet transfer process. After exposure to H2 gas pressure up to 20 bar, the chemisorption of dissociated atomic hydrogen on MLG affects its electrical and structural properties. The formation of C-H bonds causes a decoupling of graphene layers, and then interferes with charge transfer through the out of plane. As a result, the c-axis conductivity decreases. Furthermore, the electron doping effect and the decoupling of the layers were confirmed using Raman spectroscopy. Hydrogenated carbons induce a defect structure of MLG which results in the expansion of layers. We observed a 43.54% increase in the thickness of the MLG after H2 exposure using atomic force microscopy. PMID:27241072

  13. Room temperature sputtering of inclined c-axis ZnO for shear mode solidly mounted resonators

    NASA Astrophysics Data System (ADS)

    Rughoobur, G.; DeMiguel-Ramos, M.; Mirea, T.; Clement, M.; Olivares, J.; Díaz-Durán, B.; Sangrador, J.; Miele, I.; Milne, W. I.; Iborra, E.; Flewitt, A. J.

    2016-01-01

    ZnO films with a c-axis significantly inclined away from the surface normal were grown by a remote plasma sputtering technique at room temperature. The films were used to make solidly mounted resonators (SMRs) operating in shear mode at a resonant frequency of 1.35 GHz. Control of the ZnO microstructure was achieved using a polycrystalline AlN seed layer which can be added on top of a sputtered acoustic mirror to give a complete SMR device. The ZnO was reactively sputtered in an atmosphere of argon and oxygen from a zinc target. The c-axis of the ZnO was estimated to be at an angle of ˜45° to the surface normal. SMRs were measured to have quality factors (Q) of up to 140 and effective electromechanical coupling coefficients of up to 2.2% in air. Although an inclined c-axis can be achieved with direct growth onto the acoustic mirror, it is shown that the AlN seed layer provides higher coupling coefficients and narrower inclination angular distribution. The responses of the devices in liquids of different viscosities (acetone, water, and AZ5214E photoresist) were measured. The shear mode Q decreased by 45% in acetone, 72% in water, and 92% in AZ5214E.

  14. Charge-screening role of c -axis atomic displacements in YBa2Cu3O6 +x and related superconductors

    NASA Astrophysics Data System (ADS)

    Božin, E. S.; Huq, A.; Shen, Bing; Claus, H.; Kwok, W. K.; Tranquada, J. M.

    2016-02-01

    The importance of charge reservoir layers for supplying holes to the CuO2 planes of cuprate superconductors has long been recognized. Less attention has been paid to the screening of the charge transfer by the intervening ionic layers. We address this issue in the case of YBa2Cu3O6 +x , where CuO chains supply the holes for the planes. We present a simple dielectric-screening model that gives a linear correlation between the relative displacements of ions along the c axis, determined by neutron powder diffraction, and the hole density of the planes. Applying this model to the temperature-dependent shifts of ions along the c axis, we infer a charge transfer of 5-10% of the hole density from the planes to the chains on warming from the superconducting transition to room temperature. Given the significant coupling of c -axis displacements to the average charge density, we point out the relevance of local displacements for screening charge modulations and note recent evidence for dynamic screening of in-plane quasiparticles. This line of argument leads us to a simple model for atomic displacements and charge modulation that is consistent with images from scanning-tunneling microscopy for underdoped Bi2Sr2CaCu2O8 +δ .

  15. Effects of c-axis Josephson coupling on dissipation, flux dynamics and the mechanism of high-T{sub c} superconductivity

    SciTech Connect

    Gray, K.E.; Hettinger, J.D.

    1995-12-31

    Measurements of the c-axis transport in highly anisotropic HTS materials strongly indicate that Josephson coupling is involved. This conclusion affects various properties of the HTS cuprates, including the irreversibility behavior for transport in the ab planes, the direct c-axis transport and potentially the mechanism of Cooper pairing.

  16. Crystal alignment of carbonated apatite in bone and calcified tendon: results from quantitative texture analysis.

    PubMed

    Wenk, H R; Heidelbach, F

    1999-04-01

    Calcified tissue contains collagen associated with minute crystallites of carbonated apatite. In this study, methods of quantitative X-ray texture analysis were used to determine the orientation distribution and texture strength of apatite in a calcified turkey tendon and in trabecular and cortical regions of osteonal bovine ankle bone (metacarpus). To resolve local heterogeneity, a 2 or 10 microm synchrotron microfocus X-ray beam (lambda = 0.78 A) was employed. Both samples revealed a strong texture. In the case of turkey tendon, 12 times more c axes of hexagonal apatite were parallel to the fibril axis than perpendicular, and a axes had rotational freedom about the c axis. In bovine bone, the orientation density of the c axes was three times higher parallel to the surface of collagen fibrils than perpendicular to it, and there was no preferential alignment with respect to the long axis of the bone (fiber texture). Whereas half of the apatite crystallites were strongly oriented, the remaining half had a random orientation distribution. The synchrotron X-ray texture results were consistent with previous analyses of mineral orientation in calcified tissues by conventional X-ray and neutron diffraction and electron microscopy, but gave, for the first time, a quantitative description. PMID:10221548

  17. Implementing Strategic Orientation

    ERIC Educational Resources Information Center

    Fischer, Arthur K.; Brownback, Sarah

    2012-01-01

    An HRM case dealing with problems and issues of setting up orientation programs which align with corporate strategy. Discussion concerns how such a case can be used to exhibit the alignment between HRM and business strategy.

  18. Incoherent c-Axis Interplane Response of the Iron Chalcogenide FeTe0:55Se0:45 Superconductor from Infrared Spectroscopy

    SciTech Connect

    Gu, G.D.; Moon, S.J.; Homes, C.C.; Akrap, A.; Xu,, Z.J.; Wen, J.S.; Lin,, Z.W.; Li, Q.; Basov, D.N.

    2011-05-23

    We report on the interplane c-axis electronic response of FeTe{sub 0.55}Se{sub 0.45} investigated by infrared spectroscopy. We find that the normal-state c-axis electronic response of FeTe{sub 0.55}Se{sub 0.45} is incoherent and bears significant similarities to those of mildly underdoped cuprates. The c-axis optical conductivity {sigma}{sub c}({omega}) of FeTe{sub 0.55}Se{sub 0.45} does not display well-defined Drude response at all temperatures. As temperature decreases, {sigma}{sub c}({omega}) is continuously suppressed. The incoherent c-axis response is found to be related to the strong dissipation in the ab-plane transport: a pattern that holds true for various correlated materials as well as FeTe{sub 0.55}Se{sub 0.45}.

  19. Modulating alignment of membrane proteins in liquid-crystalline and oriented gel media by changing the size and charge of phospholipid bicelles

    PubMed Central

    Lorieau, Justin L; Maltsev, Alexander S.; Louis, John M; Bax, Ad

    2013-01-01

    We demonstrate that alignment of a structured peptide or small protein solubilized in mixed phospholipid:detergent micelles or bicelles, when embedded in a compressed gel or liquid crystalline medium, can be altered by either changing the phospholipid aggregate shape, charge, or both together. For the hemagglutinin fusion peptide solubilized in bicelles, we show that bicelle shape and charge do not change its helical hairpin structure but impact its alignment relative to the alignment medium, both in charged compressed acrylamide gel and in liquid crystalline d (GpG). The method can be used to generate sets of residual dipolar couplings (RDCs) that correspond to orthogonal alignment tensors, and holds promise for high-resolution structural refinement and dynamic mapping of membrane proteins. PMID:23508769

  20. Inducing uniform single-crystal like orientation in natural rubber with constrained uniaxial stretch.

    PubMed

    Zhou, Weiming; Meng, Lingpu; Lu, Jie; Wang, Zhen; Zhang, Wenhua; Huang, Ningdong; Chen, Liang; Li, Liangbin

    2015-07-01

    The effect of flow on crystallization is commonly attributed to entropic reduction, which is caused by stretch and orientation of polymer chains but overlooks the role of flow on final-state free energy. With the aid of in situ synchrotron radiation wide-angle X-ray diffraction (WAXD) and a homemade constrained uniaxial tensile testing machine, polycrystals possessing single-crystal-like orientation rather than uniaxial orientation are found during the constrained stretch of natural rubber, whereas the c-axis and a-axis align in the stretch direction (SD) and constrained direction (CD), respectively. Molecular dynamics simulation shows that aligning the a-axis of crystal nuclei in CD leads to the lowest free energy increase and favors crystal nucleation. This indicates that the nomenclature of strain-induced crystallization may not fully account for the nature of flow-induced crystallization (FIC) as strain mainly emphasizes the entropic reduction of initial melt, whereas stress rather than strain plays the dominant role in crystal deformation. The current work not only contributes to a comprehensive understanding of the mechanism of flow-induced crystallization but also demonstrates the potential application of constrained uniaxial tensile stretch for the creation of functional materials containing polycrystals that possess single-crystal-like orientation. PMID:26021287

  1. Shock wave compression and release of hexagonal-close-packed metal single crystals: Inelastic deformation of c-axis magnesium

    NASA Astrophysics Data System (ADS)

    Winey, J. M.; Renganathan, P.; Gupta, Y. M.

    2015-03-01

    To understand inelastic deformation mechanisms for shocked hexagonal-close-packed (hcp) metals, shock compression and release wave profiles, previously unavailable for hcp single crystals, were measured for c-axis magnesium crystals. The results show that the elastic-inelastic loading response is strongly time-dependent. Measured release wave profiles showed distinct peaked features, which are unusual for inelastic deformation during unloading of shocked metals. Numerical simulations show that pyramidal slip provides a reasonably good description of the inelastic loading response. However, { 10 1 ¯ 2 } twinning is needed to explain the unloading response. The results and analysis presented here provide insight into the relative roles of dislocation slip and deformation twinning in the response of shocked hcp metals.

  2. rf surface resistance of a magnetically aligned sintered pellet of YBa2Cu3O7

    NASA Astrophysics Data System (ADS)

    Padamsee, H.; Kirchgessner, J.; Moffat, D.; Rubin, D.; Shu, Q. S.; Hart, H. R.; Gaddipati, A. R.

    1990-02-01

    rf (radio frequency) properties of polycrystalline ceramic material are substantially inferior to those of the best microtwinned crystals. At 6 GHz and 77 K, the best surface resistance values for ceramics are ˜20 mΩ, compared to <0.5 mΩ for high-quality crystals. The microwave resistance is observed to increase at higher rf fields for ceramics, e.g., two orders of magnitude between 0.1 and 10 Oe, but remains low for crystals. A possible reason for the inferior properties in randomly oriented polycrystalline ceramics is related to the anisotropy of the superconducting properties; crystals aligned unfavorably with the sampling rf field could be responsible for the high resistance. Another possibility is related to the difficulty of carrying current across the grain boundaries due to weak links arising from second phases, impurities, cracks, etc., at the boundaries. To elucidate the contribution from these two potential problem sources, we have measured the rf properties at 6 GHz of an oriented polycrystalline ceramic pellet prepared from a suspension of high purity powder in a 4-T magnetic field. Samples were characterized by x-ray diffraction, light microscopy, transmission electron microscopy, x-ray rocking curves, and x-ray pole figure studies, indicating a high degree of alignment, although not as complete as in epitaxial thin films. At liquid He temperature, the surface resistance is 28 times lower when the c axis is perpendicular to the plane in which rf currents flow than when the c axis is in the plane. At 77 K, the surface resistance is 3 mΩ, a significant improvement over the properties of the best randomly oriented material reported. At 4 K the resistance improves to 0.3 mΩ. These resistances were all measured with rf fields below 0.1 Oe, but increased by one order of magnitude when the rf field was increased to 10 Oe, as in the polycrystalline material. Our results indicate that while the low-field rf behavior is strongly improved by orientation

  3. The fabrication process of a high performance and pure c-axis grown GdBCO bulk superconductor with the TSMT-IG technique

    NASA Astrophysics Data System (ADS)

    Wang, Miao; Yang, Peng-tao; Yang, Wan-min; Li, Jia-wei; Hassan, Qadeer UI

    2015-10-01

    It is very important to choose a suitable seed crystal in the fabrication process of the (RE)BCO bulk superconductors by the top-seeded growth method, because a defective seed would result in the failure of the entire sample. Therefore, for optimizing the seed, a new approach is proposed in this paper for the fabrication process of Gd-Ba-Cu-O (GdBCO) bulk with promising superconducting properties. We developed the top-seeded melt texture and infiltration growth (TSMT-IG) process based on the modified top-seeded infiltration and growth (TSIG) process. In this modified infiltration growth, a mini pellet of thin melting texture (TMT) GdBCO was inserted between the NdBCO seed crystal and the solid-phase precursor pellet, resulting in the successful formation of well purified c-axis-oriented GdBCO crystals with a proper-sized TMT layer. The growth morphology, microstructure, side growth boundary, and superconducting properties of the GdBCO bulk superconductors with three different sizes of TMT pellets were studied in this paper. The results proved that the success rate for the fabrication of single-domain GdBCO bulk superconductors can be improved by the TSMT-IG process, which can also effectively inhibit the random nucleation phenomenon at some extent during the process of single-domain GdBCO bulk superconductor growth. In addition, the application of this new growth technology can help us not only to improve the growth performance of GdBCO samples with a proper size of the TMT mini pellet but also reduce the fabrication cost due to the use of only one precursor powder.

  4. Nanosecond laser switching of surface wettability and epitaxial integration of c-axis ZnO thin films with Si(111) substrates.

    PubMed

    Molaei, R; Bayati, M R; Alipour, H M; Estrich, N A; Narayan, J

    2014-01-01

    We have achieved integration of polar ZnO[0001] epitaxial thin films with Si(111) substrates where cubic yttria-stabilized zirconia (c-YSZ) was used as a template on a Si(111) substrate. Using XRD (θ-2θ and φ scans) and HRTEM techniques, the epitaxial relationship between the ZnO and the c-YSZ layers was shown to be [0001]ZnO || [111]YSZ and [21¯1¯0]ZnO || [1¯01](c-YSZ), where the [21¯1¯0] direction lies in the (0001) plane, and the [1¯01] direction lies in the (111) plane. Similar studies on the c-YSZ/Si interface revealed epitaxy as (111)YSZ || (111)Si and in-plane (110)YSZ || (110)Si. HRTEM micrographs revealed atomically sharp and crystallographically continuous interfaces. The ZnO epilayers were subsequently laser annealed by a single pulse of a nanosecond excimer KrF laser. It was shown that the hydrophobic behavior of the pristine sample became hydrophilic after laser treatment. XPS was employed to study the effect of laser treatment on surface stoichiometry of the ZnO epilayers. The results revealed the formation of oxygen vacancies, which are envisaged to control the observed hydrophilic behavior. Our AFM studies showed surface smoothing due to the coupling of the high energy laser beam with the surface. The importance of integration of c-axis ZnO with Si(111) substrates is emphasized using the paradigm of domain matching epitaxy on the c-YSZ[111] buffer platform along with their out-of-plane orientation, which leads to improvement of the performance of the solid-state devices. The observed ultrafast response and switching in photochemical characteristics provide new opportunities for application of ZnO in smart catalysts, sensors, membranes, DNA self-assembly and multifunctional devices. PMID:24275059

  5. A General Assignment Method for Oriented Sample (OS) Solid-state NMR of Proteins Based on The Correlation of Resonances through Heteronuclear Dipolar Couplings in Samples Aligned Parallel and Perpendicular to the Magnetic Field

    PubMed Central

    Lu, George J.; Son, Woo Sung; Opella, Stanley J.

    2011-01-01

    A general method for assigning oriented sample (OS) solid-state NMR spectra of proteins is demonstrated. In principle, this method requires only a single sample of a uniformly 15N-labeled membrane protein in magnetically aligned bilayers, and a previously assigned isotropic chemical shift spectrum obtained either from solution NMR on micelle or isotropic bicelle samples or from magic angle spinning (MAS) solid-state NMR on unoriented proteoliposomes. The sequential isotropic resonance assignments are transferred to the OS solid-state NMR spectra of aligned samples by correlating signals from the same residue observed in protein-containing bilayers aligned with their normals parallel and perpendicular to the magnetic field. The underlying principle is that the resonances from the same residue have heteronuclear dipolar couplings that differ by exactly a factor of two between parallel and perpendicular alignments. The method is demonstrated on the membrane-bound form of Pf1 coat protein in phospholipid bilayers, whose assignments have been previously made using an earlier generation of methods that relied on the preparation of many selectively labeled (by residue type) samples. The new method provides the correct resonance assignments using only a single uniformly 15N-labeled sample, two solid-state NMR spectra, and a previously assigned isotropic spectrum. Significantly, this approach is equally applicable to residues in alpha helices, beta sheets, loops, and any other elements of tertiary structure. Moreover, the strategy bridges between OS solid-state NMR of aligned samples and solution NMR or MAS solid-state NMR of unoriented samples. In combination with the development of complementary experimental methods, it provides a step towards unifying these apparently different NMR approaches. PMID:21316275

  6. Orientation features of {sup 24}Mg(2+) aligned nuclei in (p, p) and (d, d) reactions at E{sub x} ≈ 7.5 MeV per nucleon

    SciTech Connect

    Galanina, L. I. Zelenskaya, N. S.; Lebedev, V. M.; Orlova, N. V.; Spassky, A. V.

    2015-09-15

    Experimental angular dependences of cross sections for elastic and inelastic scattering and the result obtained by reconstructing the populations of magnetic sublevels, multipole-moment orientation tensors, and polarization tensors are presented for {sup 24}Mg (2{sup +}, 1.369 MeV) aligned nuclei produced in inelastic proton scattering at E{sub p} = 7.4 MeV. The experimental results in question are compared with the results of calculations based on the coupled-channel method and on the compound-nucleus model, the 3/2{sup +} resonance in the {sup 25}Al compound nucleus being taken into account. The orientation features of {sup 24}Mg (2{sup +}, 1.369 MeV) nuclei produced in inelastic proton and deuteron scattering on {sup 24}Mg at E{sub x} ≈ 7.5 MeV per nucleon are found to be generally similar despite a substantial difference in the respective differential cross sections.

  7. Novel synthetic methodology for controlling the orientation of zinc oxide nanowires grown on silicon oxide substrates.

    PubMed

    Cho, Jinhyun; Salleh, Najah; Blanco, Carlos; Yang, Sungwoo; Lee, Chul-Jin; Kim, Young-Woo; Kim, Jungsang; Liu, Jie

    2014-04-01

    This study presents a simple method to reproducibly obtain well-aligned vertical ZnO nanowire arrays on silicon oxide (SiOx) substrates using seed crystals made from a mixture of ammonium hydroxide (NH4OH) and zinc acetate (Zn(O2CCH3)2) solution. In comparison, high levels of OH(-) concentration obtained using NaOH or KOH solutions lead to incorporation of Na or K atoms into the seed crystals, destroying the c-axis alignment of the seeds and resulting in the growth of misaligned nanowires. The use of NH4OH eliminates the metallic impurities and ensures aligned nanowire growth in a wide range of OH(-) concentrations in the seed solution. The difference of crystalline orientations between NH4OH- and NaOH-based seeds is directly observed by lattice-resolved images and electron diffraction patterns using a transmission electron microscope (TEM). This study obviously suggests that metallic impurities incorporated into the ZnO nanocrystal seeds are one of the factors that generates the misaligned ZnO nanowires. This method also enables the use of silicon oxide substrates for the growth of vertically aligned nanowires, making ZnO nanostructures compatible with widely used silicon fabrication technology. PMID:24584438

  8. Superconducting energy gap and c-axis plasma frequency of (Nd,Sm)FeAsO0.82F0.18 superconductors from infrared ellipsometry.

    PubMed

    Dubroka, A; Kim, K W; Rössle, M; Malik, V K; Drew, A J; Liu, R H; Wu, G; Chen, X H; Bernhard, C

    2008-08-29

    We present far-infrared ellipsometric measurements of polycrystalline samples of the pnictide superconductor RFeAsO0.82F0.18 (R=Nd and Sm). We find evidence that the electronic properties are strongly anisotropic such that the optical spectra are dominated by the weakly conducting c-axis response similar to the cuprate high-temperature superconductors. We deduce an upper limit of the c-axis superconducting plasma frequency of omega pl,c(SC)< or =260 cm(-1) corresponding to a lower limit of the c-axis magnetic penetration depth of lambda c > or =6 microm and lambda c/lambda ab > or =30 as compared to lambda ab=185 nm from muon spin rotation [A. Drew, arXiv:0805.1042 [Phys. Rev. Lett. (to be published)

  9. Electron back-scattering diffraction (EBSD) measurements of antigorite lattice-preferred orientations (LPO).

    PubMed

    van de Moortèle, B; Bezacier, L; Trullenque, G; Reynard, B

    2010-09-01

    Lattice preferred orientations of serpentines induce a strong anisotropy of various properties in serpentine bearing-rocks. Lattice preferred orientations had so far been obtained only by X-ray diffraction techniques. We have applied electron back-scattering diffraction to the measurement of the lattice preferred orientations of antigorite in a naturally deformed high-pressure serpentinite. This technique is very sensitive to sample preparation that can lead to surface amorphization in the case of serpentine. A polishing procedure is described that avoids amorphization and allows accurate electron back-scattering diffraction measurements with optimized experimental conditions in a variable pressure scanning electron microscope. Results indicate that deformation leads to lattice preferred orientations characterized by extremely strong c-axis clustering perpendicular to the foliation, as expected for a layered silicate. In the foliation plane, a significant clustering of the a-axis is observed and tentatively attributed to intracrystalline deformation mechanisms. These data suggest that antigorite deforms mostly by gliding along the basal plane of the layered phyllosilicate structure, but that gliding may occur along directions favouring a-axis alignment. Electron back-scattering diffraction appears to be a reliable method for determining phyllosilicate lattice preferred orientations in deformed rocks, with potential applications for determining anisotropy of properties like seismic velocities or thermal and electrical conductivities. PMID:20701663

  10. Hydrothermal growth and characterization of vertically well-aligned and dense ZnO nanorods on glass and silicon using a simple optimizer system

    NASA Astrophysics Data System (ADS)

    Mohammad, Sabah M.; Hassan, Z.; Ahmed, Naser M.; Talib, Rawnaq A.; Abd-Alghafour, Nabeel M.; Omar, A. F.

    2016-07-01

    Vertically, well-aligned and high density ZnO nanorods were successfully hydrothermally grown on glass and silicon substrates using a simple and low cost system. The mechanism of synthesis of ZnO nanorods, generated with our system under hydrothermal conditions, is investigated in this report. Field-emission scanning electron microscopy indicated that the fabricated ZnO nanorods on both substrates have hexagonal shape with diameters ranging from 20 nm to 70 nm which grew vertically from the substrate. XRD analysis confirms the formation of wurtzite ZnO phase with a preferred orientation along (002) direction perpendicular on the substrate and enhanced crystallinity. The low value of the tensile strain (0.126 %) revealed that ZnO nanorods preferred to grow along the c-axis for both substrates. Photoluminescence spectra exhibited a strong, sharp UV near band edge emission peak with narrow FWHM values for both samples.

  11. Structural, Magnetic and Electronic Properties of (110)-OrientedEpitaxial Thin Films of Bilayer Manganite La1.2Sr1.8Mn2O7

    SciTech Connect

    Takamura, Yayoi; Grepstad, Jostein K.; Chopdekar, Rajesh V.; Suzuki, Yuri; Marshall, Ann F.; Zheng, Hong; Mitchell, John F.

    2005-05-09

    We have synthesized (110)-oriented epitaxial thin films of the bilayer (n=2) manganite, La{sub 1.2}Sr{sub 1.8}Mn{sub 2}O{sub 7}, with the metallic/ferromagnetic a-b planes lying perpendicular to the substrate surface and the c-axis aligned in the plane of the film. X-ray diffraction and transmission electron microscopy confirm the alignment of the a-b planes along the [1{bar 1}0] substrate direction. The films consist primarily of the n=2 phase with a minor component of the n=1 (La,Sr){sub 2}MnO{sub 4} and n={infinity} (La,Sr)MnO{sub 3} phases. A resistivity maximum coincides with a ferromagnet/paramagnet transition at a reduced T{sub c}{approx}90K (vs. 120K for bulk), indicative of the effects of epitaxial strain. The films display similar anisotropic properties to their bulk counterpart with the magnetically easy direction confined to the a-b planes and 20-200 times lower resistivity for current flowing along the a-b planes compared to the c-axis.

  12. Alignment method for parabolic trough solar concentrators

    DOEpatents

    Diver, Richard B.

    2010-02-23

    A Theoretical Overlay Photographic (TOP) alignment method uses the overlay of a theoretical projected image of a perfectly aligned concentrator on a photographic image of the concentrator to align the mirror facets of a parabolic trough solar concentrator. The alignment method is practical and straightforward, and inherently aligns the mirror facets to the receiver. When integrated with clinometer measurements for which gravity and mechanical drag effects have been accounted for and which are made in a manner and location consistent with the alignment method, all of the mirrors on a common drive can be aligned and optimized for any concentrator orientation.

  13. Josephson Coupling along the c-Axis in Highly Anisotropic High Temperature Superconductors at High-Magnetic-Fields

    NASA Astrophysics Data System (ADS)

    Gray, K. E.; Hettinger+, J. D.; Washburn, B.; Veal, B. W.; Paulikas, A. P.; Kostic, P.

    1996-03-01

    We have extended previous measurements of oxygen deficient YBa_2Cu_3O_y^1 to magnetic fields as high as 27T and temperatures down to 4K. Measurements were made on three samples with different oxygen contents with critical temperatures ranging from 25K to 70K. The results are consistent with those previously reported and extend those measurements over a broader range in parameter space. These measurements demonstrate an unusual temperature dependent electron transmission suggesting increased c-axis coherency below T_c. The temperature dependence of the electron transmission extends to the lowest temperatures measured. ^+Present address: Rowan College of New Jersey. High-magnetic field measurements performed with the assistance of S. T. Hannahs at the NHMFL funded by the NSF. We acknowledge the support of the D.O.E., Divisions of Basic Energy Sciences-Materials Sciences under contract W-31-109-ENG-38, and the NSF-Office of Science and Technology Centers under contract DMR 91-20000. ^1J. D. Hettinger, K. E. Gray, B.W. Veal, A. P. Paulikas, P. Kostic, B. R. Washburn, W. C. Tonjes, and A. C. Flewelling, Phys. Rev. Lett. 74, 4726 (1995).

  14. Atom probe tomography evaporation behavior of C-axis GaN nanowires: Crystallographic, stoichiometric, and detection efficiency aspects

    SciTech Connect

    Diercks, David R. Gorman, Brian P.; Kirchhofer, Rita; Sanford, Norman; Bertness, Kris; Brubaker, Matt

    2013-11-14

    The field evaporation behavior of c-axis GaN nanowires was explored in two different laser-pulsed atom probe tomography (APT) instruments. Transmission electron microscopy imaging before and after atom probe tomography analysis was used to assist in reconstructing the data and assess the observed evaporation behavior. It was found that the ionic species exhibited preferential locations for evaporation related to the underlying crystal structure of the GaN and that the species which evaporated from these locations was dependent on the pulsed laser energy. Additionally, the overall stoichiometry measured by APT was significantly correlated with the energy of the laser pulses. At the lowest laser energies, the apparent composition was nitrogen-rich, while higher laser energies resulted in measurements of predominantly gallium compositions. The percent of ions detected (detection efficiency) for these specimens was found to be considerably below that shown for other materials, even for laser energies which produced the expected Ga:N ratio. The apparent stoichiometry variation and low detection efficiency appear to be a result of evaporation of Ga ions between laser pulses at the lowest laser energies and evaporation of neutral N{sub 2} species at higher laser energies. All of these behaviors are tied to the formation of nitrogen-nitrogen bonds on the tip surface, which occurred under all analysis conditions. Similar field evaporation behaviors are therefore expected for other materials where the anionic species readily form a strong diatomic bond.

  15. Segment alignment control system

    NASA Technical Reports Server (NTRS)

    Aubrun, JEAN-N.; Lorell, Ken R.

    1988-01-01

    The segmented primary mirror for the LDR will require a special segment alignment control system to precisely control the orientation of each of the segments so that the resulting composite reflector behaves like a monolith. The W.M. Keck Ten Meter Telescope will utilize a primary mirror made up of 36 actively controlled segments. Thus the primary mirror and its segment alignment control system are directly analogous to the LDR. The problems of controlling the segments in the face of disturbances and control/structures interaction, as analyzed for the TMT, are virtually identical to those for the LDR. The two systems are briefly compared.

  16. c-Axis zig-zag ZnO film ultrasonic transducers for designing longitudinal and shear wave resonant frequencies and modes.

    PubMed

    Yanagitani, Takahiko; Morisato, Naoki; Takayanagi, Shinji; Matsukawa, Mami; Watanabe, Yoshiaki

    2011-05-01

    A method for designing frequencies and modes in ultrasonic transducers above the very-high-frequency (VHF) range is required for ultrasonic non-destructive evaluation and acoustic mass sensors. To obtain the desired longitudinal and shear wave conversion loss characteristics in the transducer, we propose the use of a c-axis zig-zag structure consisting of multilayered c-axis 23° tilted ZnO piezoelectric films. In this structure, every layer has the same thickness, and the c-axis tilt directions in odd and even layers are symmetric with respect to the film surface normal. c-axis zig-zag crystal growth was achieved by using a SiO(2) low-temperature buffer layer. The frequency characteristics of the multilayered transducer were predicted using a transmission line model based on Mason's equivalent circuit. We experimentally demonstrated two types of transducers: those exciting longitudinal and shear waves simultaneously at the same frequency, and those exciting shear waves with suppressed longitudinal waves. PMID:21622061

  17. Are quartz LPOs predictably oriented with respect to the shear zone boundary?: A test from the Alpine Fault mylonites, New Zealand

    NASA Astrophysics Data System (ADS)

    Little, Timothy A.; Prior, David J.; Toy, Virginia G.

    2016-03-01

    The Alpine fault self-exhumes its own ductile shear zone roots and has a known slip kinematics. Within ˜1 km of the fault, the mylonitic foliation is subparallel to the boundary of the amphibolite-facies ductile shear zone in which it formed. Using EBSD, we analyzed quartz Lattice Preferred Orientations [LPOs) of mylonites along a central part of the Alpine Fault. All LPOs feature a strongest girdle of [c]-axes that is forward-inclined ˜28 ± 4° away from the pole to the fault. A maximum of axes is inclined at the same angle relative the fault. The [c]-axis girdle is perpendicular to extensional (C') shear bands and the maximum is parallel to their slip direction. [c]-axis girdles do not form perpendicular to the SZB. Schmid factor analysis suggests that σ1 was arranged at 60-80° to the Alpine Fault. These observations indicate ductile transpression in the shear zone. The inclined arrangement of [c]-axis girdles, axes, and C' planes relative to the fault can be explained by their alignment relative to planes of maximum shear-strain-rate in a general shear zone, a significant new insight regarding shear zones and how LPO fabrics may generally develop within them. For the Alpine mylonite zone, our data imply a kinematic vorticity number (Wk) of ˜0.7 to ˜0.85. Inversions of seismic focal mechanisms in the brittle crust of the Southern Alps indicate that σ1 is oriented ˜60° to the Alpine Fault; that shear bands form at ˜30° to this direction, and that σ2 and σ3 flip positions between the brittle and ductile parts of the crust.

  18. Normal-state conductivity of underdoped to overdoped cuprate superconductors: Pseudogap effects on the in-plane and c-axis charge transports

    NASA Astrophysics Data System (ADS)

    Dzhumanov, S.; Ganiev, O. K.; Djumanov, Sh. S.

    2014-05-01

    We have developed a theory of the unusual in-plane and c-axis charge transports in hole-doped cuprate superconductors and explain the temperature- and doping-dependent in-plane resistivity ρab, c-axis resistivity ρc and resistivity anisotropy ρc/ρab seen experimentally above Tc. We argue that the relevant current carriers in these materials above Tc are hole-like. The in-plane conductivity of underdoped to overdoped cuprates is considered as the conductivity of hole polarons and preformed Cooper pairs at their scattering by lattice vibrations in hole-rich CuO2 layers (with nonzero thickness). The appropriate Boltzmann transport equations were used to calculate the conductivity of polaronic carriers and bosonic Cooper pairs above and below the pseudogap (PG) temperature T* in the relaxation time approximation. We show that the linearity of ρab(T) above T* is associated with the polaron-phonon scattering, while different deviations from the T-linear behavior in ρab(T) below T* are caused by transition to the BCS-like PG regime. The specific model for layered cuprates is used to simulate the c-axis transport and to calculate the c-axis conductivity associated with the thermal dissociation of localized bipolarons in carrier-poor regions between the CuO2 layers into hole polarons which subsequently move by hopping along the c-axis. It is shown that the bipolaronic PG and carrier-confinement together cause the insulating ρc(T) behavior in the cuprates. The calculated results for ρab(T), ρc(T) and ρc(T)/ρab(T) were compared with the experimental data obtained for various hole-doped cuprates. For all the considered cases, a good quantitative agreement was found between theory and experimental data.

  19. Nuclear reactor internals alignment configuration

    DOEpatents

    Gilmore, Charles B.; Singleton, Norman R.

    2009-11-10

    An alignment system that employs jacking block assemblies and alignment posts around the periphery of the top plate of a nuclear reactor lower internals core shroud to align an upper core plate with the lower internals and the core shroud with the core barrel. The distal ends of the alignment posts are chamfered and are closely received within notches machined in the upper core plate at spaced locations around the outer circumference of the upper core plate. The jacking block assemblies are used to center the core shroud in the core barrel and the alignment posts assure the proper orientation of the upper core plate. The alignment posts may alternately be formed in the upper core plate and the notches may be formed in top plate.

  20. Anisotropy of Longitudinal Wave Velocity and Hydroxyapatite Orientation in Bovine Cortical Bone

    NASA Astrophysics Data System (ADS)

    Yaoi, Yuichiro; Yamamoto, Kazufumi; Nakatsuji, Tomohiro; Yanagitani, Takahiko; Matsukawa, Mami; Yamazaki, Kaoru; Nagano, Akira

    2009-07-01

    The anisotropy of longitudinal wave velocity and the hydroxyapatite (HAp) crystallite orientation in bovine cortical bone were experimentally investigated in detail. A ring-shaped cortical bone sample was obtained from the midshaft of a 32-month-old bovine femur. Four cylindrical specimens (diameter 11 mm) were taken from the ring-shaped cortical bone specimen along the radial direction. Velocity was measured by a conventional ultrasonic pulse system, by rotating the specimen in the axial-tangential plane. The direction of the fastest wave velocity observed was inclined 5-10° from the axial direction. The HAp crystallite orientation in the specimen was also investigated by X-ray diffraction pole-figure analysis. We observed a strong intensive peak of (0002), indicating HAp crystallite c-axis alignment along the bone axis. However, the pole-figure also revealed a small tilt in the HAp crystallite orientation from the axial direction. Comparing the velocity and X-ray diffraction peak at each angle of the axial-tangential plane, a significant correlation between the velocity and the HAp orientation was observed.

  1. Alignment validation

    SciTech Connect

    ALICE; ATLAS; CMS; LHCb; Golling, Tobias

    2008-09-06

    The four experiments, ALICE, ATLAS, CMS and LHCb are currently under constructionat CERN. They will study the products of proton-proton collisions at the Large Hadron Collider. All experiments are equipped with sophisticated tracking systems, unprecedented in size and complexity. Full exploitation of both the inner detector andthe muon system requires an accurate alignment of all detector elements. Alignmentinformation is deduced from dedicated hardware alignment systems and the reconstruction of charged particles. However, the system is degenerate which means the data is insufficient to constrain all alignment degrees of freedom, so the techniques are prone to converging on wrong geometries. This deficiency necessitates validation and monitoring of the alignment. An exhaustive discussion of means to validate is subject to this document, including examples and plans from all four LHC experiments, as well as other high energy experiments.

  2. Size-matching effect on inorganic nanosheets: control of distance, alignment, and orientation of molecular adsorption as a bottom-up methodology for nanomaterials.

    PubMed

    Takagi, Shinsuke; Shimada, Tetsuya; Ishida, Yohei; Fujimura, Takuya; Masui, Dai; Tachibana, Hiroshi; Eguchi, Miharu; Inoue, Haruo

    2013-02-19

    We have been investigating complexes composed of nanolayered materials with anionic charges such as clay nanosheets and dye molecules such as cationic porphyrins. It was found that the structure of dye assembly on the layered materials can be effectively controlled by the use of electrostatic host-guest interaction. The intermolecular distance, the molecular orientation angle, the segregation/integration behavior, and the immobilization strength of the dyes can be controlled in the clay-dye complexes. The mechanism to control these structural factors has been discussed and was established as a size-matching effect. Unique photochemical reactions such as energy transfer through the use of this methodology have been examined. Almost 100% efficiency of the energy-transfer reaction was achieved in the clay-porphyrin complexes as a typical example for an artificial light-harvesting system. Control of the molecular orientation angle is found to be useful in regulating the energy-transfer efficiency and in preparing photofunctional materials exhibiting solvatochromic behavior. Through our study, clay minerals turned out to serve as protein-like media to control the molecular position, modify the properties of the molecule, and provide a unique environment for chemical reactions. PMID:23343172

  3. Field-induced orbital distortion in high-order-harmonic generation from aligned and oriented molecules within adiabatic strong-field approximation

    NASA Astrophysics Data System (ADS)

    Śpiewanowski, Maciej Dominik; Madsen, Lars Bojer

    2014-04-01

    We describe high-order-harmonic generation (HHG) within the adiabatic strong-field approximation (ASFA) where the ground state and its energy adiabatically follows the instantaneous external field and within the Stark-shift-corrected SFA (SSFA), where only the energy shift is accounted for. We show that the molecular polarizability reflects the significance of field-induced orbital distortion in the HHG process. We show that for CO2, which possesses a relatively low polarizability, the two-center interference minimum can be clearly seen in both the ASFA and the SSFA. This finding is in agreement with experimental data at large wavelength. Moreover, we introduce a method for analyzing the recombination events. This method relies on averaging the recombination matrix elements weighted with the photon emission probability of each harmonic. In the case of CO2 this method confirms that the interference minimum is determined by recombination to the two O atoms. We use the example of N2O, which has a moderate polarizability, to show that the number of centers taking part in the creation of the interference minimum may change depending on the intensity. Finally, we show that in the short-pulse limit, the minimum in the HHG spectrum from oriented N2O strongly depends on the molecular orientation and carrier-envelope phase.

  4. Kinematic alignment of non-interacting CALIFA galaxies. Quantifying the impact of bars on stellar and ionised gas velocity field orientations

    NASA Astrophysics Data System (ADS)

    Barrera-Ballesteros, J. K.; Falcón-Barroso, J.; García-Lorenzo, B.; van de Ven, G.; Aguerri, J. A. L.; Mendez-Abreu, J.; Spekkens, K.; Lyubenova, M.; Sánchez, S. F.; Husemann, B.; Mast, D.; García-Benito, R.; Iglesias-Paramo, J.; Del Olmo, A.; Márquez, I.; Masegosa, J.; Kehrig, C.; Marino, R. A.; Verdes-Montenegro, L.; Ziegler, B.; McIntosh, D. H.; Bland-Hawthorn, J.; Walcher, C. J.; Califa Collaboration

    2014-08-01

    We present 80 stellar and ionised gas velocity maps from the Calar Alto Legacy Integral Field Area (CALIFA) survey in order to characterise the kinematic orientation of non-interacting galaxies. The study of galaxies in isolation is a key step towards understanding how fast-external processes, such as major mergers, affect kinematic properties in galaxies. We derived the global and individual (projected approaching and receding sides) kinematic position angles (PAs) for both the stellar and ionised gas line-of-sight velocity distributions. When compared to the photometric PA, we find that morpho-kinematic differences are smaller than 22 degrees in 90% of the sample for both stellar and nebular components and that internal kinematic misalignments are generally smaller than 16 degrees. We find a tight relation between the global stellar and ionised gas kinematic PA consistent with circular-flow pattern motions in both components (~90% of the sample has differences smaller than 16 degrees). This relation also holds, generally in barred galaxies across the bar and galaxy disc scales. Our findings suggest that even in the presence of strong bars, both the stellar and the gaseous components tend to follow the gravitational potential of the disc. As a result, kinematic orientation can be used to assess the degree of external distortions in interacting galaxies. Appendices are available in electronic form at http://www.aanda.org

  5. Transport and optical properties of c-axis oriented wedge shaped GaN nanowall network grown by molecular beam epitaxy

    SciTech Connect

    Bhasker, H. P.; Dhar, S.; Thakur, Varun; Kesaria, Manoj; Shivaprasad, S. M.

    2014-02-21

    The transport and optical properties of wedge-shaped nanowall network of GaN grown spontaneously on cplane sapphire substrate by Plasma-Assisted Molecular Beam Epitaxy (PAMBE) show interesting behavior. The electron mobility at room temperature in these samples is found to be orders of magnitude higher than that of a continuous film. Our study reveals a strong correlation between the mobility and the band gap in these nanowall network samples. However, it is seen that when the thickness of the tips of the walls increases to an extent such that more than 70% of the film area is covered, it behaves close to a flat sample. In the sample with lower surface coverage (≈40% and ≈60%), it was observed that the conductivity, mobility as well as the band gap increase with the decrease in the average tip width of the walls. Photoluminescence (PL) experiments show a strong and broad band edge emission with a large (as high as ≈ 90 meV) blue shift, compared to that of a continuous film, suggesting a confinement of carriers on the top edges of the nanowalls. The PL peak width remains wide at all temperatures suggesting the existence of a high density of tail states at the band edge, which is further supported by the photoconductivity result. The high conductivity and mobility observed in these samples is believed to be due to a “dissipation less” transport of carriers, which are localized at the top edges (edge states) of the nanowalls.

  6. Transport and optical properties of c-axis oriented wedge shaped GaN nanowall network grown by molecular beam epitaxy

    NASA Astrophysics Data System (ADS)

    Bhasker, H. P.; Thakur, Varun; Kesaria, Manoj; Shivaprasad, S. M.; Dhar, S.

    2014-02-01

    The transport and optical properties of wedge-shaped nanowall network of GaN grown spontaneously on cplane sapphire substrate by Plasma-Assisted Molecular Beam Epitaxy (PAMBE) show interesting behavior. The electron mobility at room temperature in these samples is found to be orders of magnitude higher than that of a continuous film. Our study reveals a strong correlation between the mobility and the band gap in these nanowall network samples. However, it is seen that when the thickness of the tips of the walls increases to an extent such that more than 70% of the film area is covered, it behaves close to a flat sample. In the sample with lower surface coverage (≈40% and ≈60%), it was observed that the conductivity, mobility as well as the band gap increase with the decrease in the average tip width of the walls. Photoluminescence (PL) experiments show a strong and broad band edge emission with a large (as high as ≈ 90 meV) blue shift, compared to that of a continuous film, suggesting a confinement of carriers on the top edges of the nanowalls. The PL peak width remains wide at all temperatures suggesting the existence of a high density of tail states at the band edge, which is further supported by the photoconductivity result. The high conductivity and mobility observed in these samples is believed to be due to a "dissipation less" transport of carriers, which are localized at the top edges (edge states) of the nanowalls.

  7. Collective responses of Bi-2212 stacked junction to 100 GHz microwave radiation under magnetic field oriented along the c-axis

    NASA Astrophysics Data System (ADS)

    Pavlenko, V. N.; Latyshev, Yu. I.; Chen, J.; Gaifullin, M. B.; Irzhak, A.; Kim, S.-J.; Wu, P. H.

    2009-05-01

    We studied a response of Bi-2212 mesa type structures to 100 GHz microwave radiation. We found that applying magnetic field of about 0.1 T across the layers enables to observe collective Shapiro step response corresponding to a synchronization of all 50 intrinsic Josephson junctions (IJJ) of the mesa. At high microwave power we observed up to 10th harmonics of the fundamental Shapiro step. Besides, we found microwave induced flux-flow step position of which is proportional to the square root of microwave power and that can exceed at high enough powers 1 THz operating frequency of IJJ oscillations.

  8. Enhanced alignment and magnetic properties of die-upset nano-crystal Nd2Fe14B magnets with Nb addition

    NASA Astrophysics Data System (ADS)

    Ma, Yilong; Chen, Dengming; Zhou, Anruo; Sun, Jianchun; Cao, Pengjun

    2012-12-01

    It is difficult to obtain the crystallographic alignment for stoichiometric Nd2Fe14B alloys by applying the melt-spun and subsequent hot-pressing and hot-deformation techniques. However, the enhanced alignment and magnetic properties of die-upset nano-crystal Nd2Fe14B magnets have been obtained by Nb addition in the present paper. The magnetic properties studies show that Nb addition leads to the remarkable increase of remanence Br and intrinsic coercivity Hci, which is due to the improvement of c-axis texture and refinement of microstructure. Microstructure studies using transmission electron microscopy (TEM) and X-ray diffraction (XRD) reveal that Nb atoms are enriched at grain boundary and the NbFeB phase is observed with increasing Nb content. Since some Fe atoms in the Nd2Fe14B phase participate in the formation of NbFeB phase, the excessive Nd atoms may be enriched at grain boundary, which may improve the physical property of grain boundary and provide a mass transport pass for preferential growth of oriented Nd2Fe14B grains, thus leading to the enhanced alignment and magnetic properties.

  9. Electronic structure of c-axis controlled α-Fe2O3 thin film probed by soft-X-ray spectroscopy

    NASA Astrophysics Data System (ADS)

    Kawamura, Kinya; Suzuki, Naoya; Tsuchiya, Takashi; Yamaguchi, Shohei; Ochi, Masanori; Suetsugu, Takaaki; Minohara, Makoto; Kobayashi, Masaki; Horiba, Koji; Kumigashira, Hiroshi; Higuchi, Tohru

    2016-06-01

    We have prepared c-axis controlled α-Fe2O3 thin films on Al2O3 substrates by RF magnetron sputtering and studied their electronic structure by soft-X-ray spectroscopy. The lattice constant of c-axis increases with increasing film thickness due to the relaxation of lattice mismatch between α-Fe2O3 and Al2O3 and formation of oxygen vacancies. The electrical conductivity is higher in thicker thin film. The valence band consists of t2g- and eg-subbband of Fe 3d state hybridized with O 2p state. The band gaps of ∼25 and ∼95 nm thicknesses of Fe2O3 thin film are ∼1.8 and 1.4 eV, respectively, which correspond to the activation energy of electron conductivity. The above results indicate that the band gap and the conductivity of α-Fe2O3 thin film directly affect the change of the lattice constant of c-axis and formation of oxygen vacancies.

  10. Charge-screening role of c-axis atomic displacements in YBa2Cu3O6+x and related superconductors

    DOE PAGESBeta

    E. S. Bozin; Huq, A.; Shen, Bing; Claus, H.; Kwok, W. K.; Tranquada, J. M.

    2016-02-29

    Here, the importance of charge reservoir layers for supplying holes to the CuO2 planes of cuprate superconductors has long been recognized. Less attention has been paid to the screening of the charge transfer by the intervening ionic layers. We address this issue in the case of YBa2Cu3O6+x, where CuO chains supply the holes for the planes. We present a simple dielectric-screening model that gives a linear correlation between the relative displacements of ions along the c axis, determined by neutron powder diffraction, and the hole density of the planes. Applying this model to the temperature-dependent shifts of ions along themore » c axis, we infer a charge transfer of 5–10% of the hole density from the planes to the chains on warming from the superconducting transition to room temperature. Given the significant coupling of c-axis displacements to the average charge density, we point out the relevance of local displacements for screening charge modulations and note recent evidence for dynamic screening of in-plane quasiparticles. This line of argument leads us to a simple model for atomic displacements and charge modulation that is consistent with images from scanning-tunneling microscopy for underdoped Bi2Sr2CaCu2O8+δ.« less

  11. Dynamic control of substrate bias for highly c-axis textured thin ferromagnetic CoCrTa film in inductively coupled plasma-assisted sputtering

    SciTech Connect

    Okimura, Kunio; Oyanagi, Junya

    2005-01-01

    This study shows highly c-axis textured thin ferromagnetic Co-based alloy (CoCrTa) film growth in inductively coupled plasma (ICP)-assisted sputtering with an internal coil with an insulated surface. Dynamic control of the substrate bias achieved highly c-axis textured CoCrTa film with a thickness of 70 nm in 3 min depositions on a Si substrate. The prepared film showed a smooth, dense surface consisting of small crystal grains. The film had a perpendicular magnetic coercivity of 1030 Oe and coercive squareness of 0.36. ICP-assisted sputtering with an internal coil with an insulated surface enabled higher-density ({>=}1.0x10{sup 11} cm{sup -3}) plasma with lower space potential ({<=}30 V) compared to ICP-assisted sputtering with bare coil systems. Therefore, the proposed bias control is quite effective for textured growth of thinner Co layers via the effect of a high flux of ions with proper energies. This method can be a candidate for the deposition technique of c-axis textured films as perpendicular magnetic recording media.

  12. Growth and characterization of vertically aligned ZnO nanorods grown on porous silicon: Effect of precursor concentration

    NASA Astrophysics Data System (ADS)

    Shabannia, R.; Abu Hassan, H.

    2013-10-01

    Vertically aligned ZnO nanorods were successfully synthesized on porous silicon (PS) substrates by chemical bath deposition method at low temperature. The effect of precursor concentration on the growth of ZnO nanorods were systematically characterized by X-ray diffraction (XRD), field emission scanning electron microscopy (FESEM), low and high-resolution transmission electron microscopy (HRTEM), photoluminescence (PL), and Raman spectroscopy. The XRD results reveal that all the as-grown ZnO nanorod arrays grew preferentially oriented along the c-axis with a hexagonal wurtzite structure. The FESEM images show that the ZnO nanorods grown perpendicular to the PS substrates had diameters and lengths ranging from 13 nm to 69 nm and from 85 nm to 208 nm, respectively. The low-resolution TEM image indicates that the ZnO nanorod arrays had a uniform diameter along their whole length and a smooth surface. PL and Raman analyses reveal that the aligned ZnO nanorods exhibited a sharp ultraviolet peak and high E2 (high) at around 390 nm and 433.8 cm-1, respectively. Furthermore, the ZnO nanorods grew vertically under 0.050 M precursor concentration, resulting in a high structural and optical quality. These ZnO nanorods can be potentially used for fabricating nanoelectronic and nano-optical devices.

  13. Phosphorylation and the N-terminal extension of the regulatory light chain help orient and align the myosin heads in Drosophila flight muscle

    SciTech Connect

    Farman, Gerrie P.; Miller, Mark S.; Reedy, Mary C.; Soto-Adames, Felipe N.; Vigoreaux, Jim O.; Maughan, David W.; Irving, Thomas C.

    2010-02-02

    X-ray diffraction of the indirect flight muscle (IFM) in living Drosophila at rest and electron microscopy of intact and glycerinated IFM was used to compare the effects of mutations in the regulatory light chain (RLC) on sarcomeric structure. Truncation of the RLC N-terminal extension (Dmlc2{sup {Delta}2-46}) or disruption of the phosphorylation sites by substituting alanines (Dmlc2{sup S66A, S67A}) decreased the equatorial intensity ratio (I{sub 20}/I{sub 10}), indicating decreased myosin mass associated with the thin filaments. Phosphorylation site disruption (Dmlc2{sup S66A, S67A}), but not N-terminal extension truncation (Dmlc2{sup {Delta}2-46}), decreased the 14.5 nm reflection intensity, indicating a spread of the axial distribution of the myosin heads. The arrangement of thick filaments and myosin heads in electron micrographs of the phosphorylation mutant (Dmlc2{sup S66A, S67A}) appeared normal in the relaxed and rigor states, but when calcium activated, fewer myosin heads formed cross-bridges. In transgenic flies with both alterations to the RLC (Dmlc2{sup {Delta}2-46; S66A, S67A}), the effects of the dual mutation were additive. The results suggest that the RLC N-terminal extension serves as a 'tether' to help pre-position the myosin heads for attachment to actin, while phosphorylation of the RLC promotes head orientations that allow optimal interactions with the thin filament.

  14. Alignment fixture

    DOEpatents

    Bell, Grover C.; Gibson, O. Theodore

    1980-01-01

    A part alignment fixture is provided which may be used for precise variable lateral and tilt alignment relative to the fixture base of various shaped parts. The fixture may be used as a part holder for machining or inspection of parts or alignment of parts during assembly and the like. The fixture includes a precisely machined diameter disc-shaped hub adapted to receive the part to be aligned. The hub is nested in a guide plate which is adapted to carry two oppositely disposed pairs of positioning wedges so that the wedges may be reciprocatively positioned by means of respective micrometer screws. The sloping faces of the wedges contact the hub at respective quadrants of the hub periphery. The lateral position of the hub relative to the guide plate is adjusted by positioning the wedges with the associated micrometer screws. The tilt of the part is adjusted relative to a base plate, to which the guide plate is pivotally connected by means of a holding plate. Two pairs of oppositely disposed wedges are mounted for reciprocative lateral positioning by means of separate micrometer screws between flanges of the guide plate and the base plate. Once the wedges are positioned to achieve the proper tilt of the part or hub on which the part is mounted relative to the base plate, the fixture may be bolted to a machining, inspection, or assembly device.

  15. ALIGNING JIG

    DOEpatents

    Culver, J.S.; Tunnell, W.C.

    1958-08-01

    A jig or device is described for setting or aligning an opening in one member relative to another member or structure, with a predetermined offset, or it may be used for measuring the amount of offset with which the parts have previously been sct. This jig comprises two blocks rabbeted to each other, with means for securing thc upper block to the lower block. The upper block has fingers for contacting one of the members to be a1igmed, the lower block is designed to ride in grooves within the reference member, and calibration marks are provided to determine the amount of offset. This jig is specially designed to align the collimating slits of a mass spectrometer.

  16. Image alignment

    DOEpatents

    Dowell, Larry Jonathan

    2014-04-22

    Disclosed is a method and device for aligning at least two digital images. An embodiment may use frequency-domain transforms of small tiles created from each image to identify substantially similar, "distinguishing" features within each of the images, and then align the images together based on the location of the distinguishing features. To accomplish this, an embodiment may create equal sized tile sub-images for each image. A "key" for each tile may be created by performing a frequency-domain transform calculation on each tile. A information-distance difference between each possible pair of tiles on each image may be calculated to identify distinguishing features. From analysis of the information-distance differences of the pairs of tiles, a subset of tiles with high discrimination metrics in relation to other tiles may be located for each image. The subset of distinguishing tiles for each image may then be compared to locate tiles with substantially similar keys and/or information-distance metrics to other tiles of other images. Once similar tiles are located for each image, the images may be aligned in relation to the identified similar tiles.

  17. Electrical behaviors of c-axis textured 0.975Bi0.5Na0.5TiO3-0.025BiCoO3 thin films grown by pulsed laser deposition

    NASA Astrophysics Data System (ADS)

    Guo, Feifei; Yang, Bin; Zhang, Shantao; Liu, Danqing; Wu, Fengmin; Wang, Dali; Cao, Wenwu

    2013-10-01

    The thin films of 0.975Bi0.5Na0.5TiO3-0.025BiCoO3 (BNT-BC) have been successfully deposited on (1 1 1) Pt/Ti/SiO2/Si (1 0 0) substrates by pulse laser deposition and their ferroelectric, dielectric, local piezoelectric properties and temperature dependent leakage current behaviors have been investigated systematically. X-ray diffraction indicates the films are single phased and c-axis oriented. The thin films exhibit ferroelectric polarization-electric field (P-E) hysteresis loop with a remnant polarization (Pr) of 10.0 μC/cm2 and an excellent fatigue resistance property up to 5 × 109 switching cycles. The dielectric constant and dielectric loss are 500 and 0.22 at 1 kHz, respectively. The tunability of the dielectric constant is about 12% at 20 kV/mm. The piezo-phase response hysteresis loop and piezo-amplitude response butterfly curve are observed by switching spectroscopy mode of piezoelectric force microscope (SS-PFM) and the piezoelectric coefficient d33 is about 19-63 pm/V, which is comparable to other reports. The dominant leakage current conduction mechanisms are ohmic conduction at low electric field and Schottky emission at high electric field, respectively. Our results may be helpful for further work on BNT-based thin films with improved electric properties.

  18. Anomalous elongation of c-axis of GaN on Al2O3 grown by MBE using NH3-cluster ions

    NASA Astrophysics Data System (ADS)

    Ichinohe, Yoshihiro; Imai, Kazuaki; Suzuki, Kazuhiko; Saito, Hiroshi

    2016-02-01

    GaN thin films were grown on Al2O3 (0001) by MBE using NH3-clusters either ionized with the energy of 4-7 eV/molecule (ionized Cluster Beam, i-CB) or un-ionized with the energy of about 0.1 eV/molecule (neutral Cluster Beam, n-CB) at growth temperatures ranging from 390 to 960 °C. The c-axis is extremely elongated but the a-axis is shrunken at the initial growth stage (up to the film thickness of about 10 nm) in GaN grown by the mixture of n- and i-CB under N-rich condition. The films thicker than 30 nm have the relaxed a- and c-axis lengths close to the unstrained values and obey the Poisson relation. GaN grown by i-CB under Ga-rich condition have the relaxed lattice constants obeying the Poisson relation for the film as thin as 6 nm. In GaN grown by the cluster beam (CB) which is not ionized intentionally, both a- and c-axis lengths are almost independent of the film thickness, having nearly the same values as those of the unstrained samples. These characteristics can be ascribed to the nature of interface between the nitrided Al2O3 substrate and epilayer. It is concluded that the films grown by i-CB bond firmly to underlay AlN than the films by n-CB and CB.

  19. Slip of c + a/2 dislocations in Ti{sub 3}Al single crystals strained in tension along the c-axis

    SciTech Connect

    Minonishi, Y.; Legros, M.; Caillard, D.

    1997-12-31

    In situ TEM straining experiments have been performed on a Ti{sub 3}Al single crystal, along the c-axis, in order to study the slip of 2c+a dislocations in pyramidal planes. The results show that slip takes place in {pi}{sub 1} planes, in contrast with what has been observed after compression tests (slip in {pi}{sub 2} planes), and that rows of loops are nucleated in the slip plane.The mechanisms which may control slip in the {pi}{sub 1} planes are briefly discussed.

  20. Influence of target-substrate angle on the elemental concentration of c-axis YBa2Cu3O7-x thin films

    NASA Astrophysics Data System (ADS)

    Pugel, D. E.; Greene, L. H.

    1999-09-01

    The thermalization processes in sputtering suggest a spatial dependence of elemental concentration in the sputter plume. A variety of analysis techniques demonstrate that c-axis films grown at angles which deviate from the standard off-axis geometry produce nominally YBa2Cu3O7-x in the bulk with dramatic changes in the surface morphology and deposition rate. In addition to the common materials characterization techniques of scanning electron microscopy, x-ray diffraction, transport measurements, and conventional Rutherford backscattering spectrometry (RBS), angle-dependent RBS is employed to probe surface inhomogeneities of films grown at target-substrate angles away from the standard off-axis position.

  1. Photoinduced enhancement of the c-axis conductivity in oxygen-deficient YBa{sub 2}Cu{sub 3}O{sub x} thin films

    SciTech Connect

    Markowitsch, W.; Stockinger, C.; Lang, W. |; Bierleutgeb, K.; Pedarnig, J.D.; Baeuerle, D.

    1997-09-01

    High quality thin films of oxygen-depleted YBa{sub 2}Cu{sub 3}O{sub x} (x{approx}6.6) were prepared by pulsed-laser deposition on SrTiO{sub 3}, substrates that were cut with tilt angles of 10{degree} and 20{degree} with respect to the [001] direction, resulting in a steplike growth of the layers. The resistance showed a semiconducting behavior along the projection of the c axis to the film surface, but a metallic behavior in the perpendicular direction, indicating that the former is dominated by the c-axis resistivity and the latter by the ab-plane resistivity of YBa{sub 2}Cu{sub 3}O{sub x}. Long-term illumination of the samples with a 100 W halogen lamp resulted in a significant conductivity enhancement in both directions. The photoinduced change of the out-of-plane resistance vs temperature characteristics is comparable to the effect of large hydrostatic pressure, introducing structural changes similar to that of photoexcitation. {copyright} {ital 1997 American Institute of Physics.}

  2. Synthesis of textured thin piezoelectric AlN films with a nonzero c-axis mean tilt for the fabrication of shear mode resonators.

    PubMed

    Bjurström, Johan; Wingqvist, Gunilla; Katardjiev, Ilia

    2006-11-01

    A method for the deposition of thin piezoelectric aluminum nitride (AlN) films with a nonzero c-axis mean tilt has been developed. The deposition is done in a standard reactive magnetron sputter deposition system without any hardware modifications. In essence, the method consists of a two-stage deposition process. The resulting film has a distinct tilted texture with the mean tilt of the c-axis varying roughly in the interval 28 to 32 degrees over the radius of the wafer excluding a small exclusion zone at the center of the latter. The mean tilt angle distribution over the wafer has a circular symmetry. A membrane-type shear mode thickness-excited thin film bulk acoustic resonator together with a micro-fluidic transport system has been subsequently fabricated using the two stage AlN deposition as well as standard bulk micro machining of Si. The resonator consisted of a 2-microm-thick AlN film with 200nm-thick Al top and bottom electrodes. The resonator was characterized with a network analyzer when operating in both air and water. The shear mode resonance frequency was about 1.6 GHz, the extracted device Q around 350, and the electromechanical coupling kt2 2% when the resonator was operated in air, whereas the latter two dropped down to 150 and 1.8%, respectively, when the resonator was operated in pure water. PMID:17091844

  3. IUS prerelease alignment

    NASA Technical Reports Server (NTRS)

    Evans, F. A.

    1978-01-01

    Space shuttle orbiter/IUS alignment transfer was evaluated. Although the orbiter alignment accuracy was originally believed to be the major contributor to the overall alignment transfer error, it was shown that orbiter alignment accuracy is not a factor affecting IUS alignment accuracy, if certain procedures are followed. Results are reported of alignment transfer accuracy analysis.

  4. Investigations on the growth and characterization of vertically aligned zinc oxide nanowires by radio frequency magnetronsputtering

    SciTech Connect

    Venkatesh, P. Sundara; Jeganathan, K.

    2013-04-15

    Undoped vertically aligned ZnO nanowires have been grown on silicon (111) substrates by the rf magnetron sputtering technique without metal catalyst. The diameter, length and density distributions of the nanowires have been analyzed with respect to the different growth durations. The tapering of the nanowires is observed for the growth duration of 120 min owing to the insufficient adatoms on the growth front. In the X-ray diffraction pattern, the dominant (002) peak with narrow full width at half maximum (FWHM) of ZnO nanowires indicates the c-axis orientation and high crystalline nature with hexagonal wurtzite crystal structure. The narrow FWHM of E{sub 2}{sup low} and E{sub 2}{sup high} phonon modes (1.4 and 9.1 cm{sup −1}) provide an additional evidence for the high crystalline and optical properties of the nanowires. The low temperature photoluminescence spectra are dominated by the green emission at∼2.28 eV induced by the electron transitions between shallow donor and acceptor energy levels. - Graphical abstract: Coalescence free vertically aligned ZnO nanowires have been grown on silicon (111) substrate by the radio frequency magnetron sputtering technique. Highlights: ► ZnO nanowires have been grown by rf magnetron sputtering. ► A morphologically superior and coalescence free ZnO nanowires have been realized. ► ZnO nanowires exhibit hexagonal wurtzite crystal structure. ► A dominant visible emission indicates the presence of point defects in nanowires.

  5. Preparation of bi-axially aligned YBa 2Cu 3O 7- δ film on CeO 2-buffered MgO by chemical solution deposition

    NASA Astrophysics Data System (ADS)

    Yamagiwa, K.; Hiei, H.; Takahashi, Y.; Kim, S. B.; Matsumoto, K.; Ikuta, H.; Mizutani, U.; Hirabayashi, I.

    2000-06-01

    We have succeeded in preparing in-plane aligned YBa 2Cu 3O 7- δ (Y123) film by chemical solution deposition (CSD) processing on CeO 2 (100)-buffered MgO (100) substrates. The CeO 2 buffer film was deposited on MgO (100) single crystalline substrate by pulsed laser deposition (PLD). For CSD coating, a homogeneous coating solution having a molar ratio of Y:Ba:Cu=1:2:3, was prepared by dissolving metal naphthenates in toluene. This solution was spin-coated both on the YSZ (100) and on the CeO 2-buffered MgO (100) single crystalline substrates. The precursor films were calcined at 425°C and fired at various temperatures under low oxygen partial pressure ( pO 2). All Y123 films showed strong (00 n) peaks, which correspond to c-axis orientation perpendicular to the substrates and their a/ b-axes were in-plane aligned. We confirmed that CeO 2 buffer is usable for CSD processing. While the Y123 films on the YSZ reacted with the substrate forming BaZrO 3 phase and did not show sufficient superconducting properties. The Tc,zero value of the Y123 film prepared on CeO 2-buffered MgO substrate was 91.5 K and Jc was 1.2×10 5 A/cm 2 at 77 K, 0 T.

  6. Aligned, short-fiber composites by novel flow processing methods

    SciTech Connect

    Guell, D.C.; Graham, A.L.; Papathanasiou, T.; Petrovic, J.J.

    1993-01-01

    A hydrodynamic method has been employed to align short, reinforcing fibers in polymer matrix composite materials. Samples of composite materials were prepared and tested two at a time (one with randomly oriented fibers and the other with aligned fibers) to isolate and directly measure the effect on mechanical properties of aligning the fibers. Data were collected for the ultimate tensile strength, modulus of elasticity, and ultimate tensile strain of the composite samples prepared. Results show that the aligned fibers were approximately twice as effective (as randomly oriented fibers) at stiffening and strengthening the composite in the alignment direction. 5 figs, 20 refs.

  7. Aligned, short-fiber composites by novel flow processing methods

    SciTech Connect

    Guell, D.C.; Graham, A.L.; Papathanasiou, T.; Petrovic, J.J.

    1993-03-01

    A hydrodynamic method has been employed to align short, reinforcing fibers in polymer matrix composite materials. Samples of composite materials were prepared and tested two at a time (one with randomly oriented fibers and the other with aligned fibers) to isolate and directly measure the effect on mechanical properties of aligning the fibers. Data were collected for the ultimate tensile strength, modulus of elasticity, and ultimate tensile strain of the composite samples prepared. Results show that the aligned fibers were approximately twice as effective (as randomly oriented fibers) at stiffening and strengthening the composite in the alignment direction. 5 figs, 20 refs.

  8. Measurement of c-axis optical absorptivity of La{sub 1.87}Sr{sub 0.13}CuO{sub 4}

    SciTech Connect

    Birmingham, J.T.; Grannan, S.M.; Richards, P.L.; Henn, R.; Kircher, J.; Cardona, M.; Wittlin, A.; Duijn, V.H.M.; Menovsky, A.A.

    1996-12-31

    The authors have directly measured the c-axis optical absorptivity of a large single crystal of La{sub 1.87}Sr{sub 0.13}CuO{sub 4} between 9 and 80 cm{sup {minus}1} at 2 K using Fourier transform spectroscopy and an absorbed power technique. They see an absorptivity onset at 41 cm{sup {minus}1}, which is 2--3 cm{sup {minus}1} higher than that measured at 6 K with reflectance on the same sample, suggesting that a significant fraction of the electrons remain unpaired at 6 K. The absorption increases with frequency below the onset, increasing from 0.3% at 9 cm{sup {minus}1} to 8% at 40 cm{sup {minus}1}. The data are particularly significant at frequencies below the plasma edge, for which the reflectance is close to unity.

  9. c-axis inclined ZnO films for shear-wave transducers deposited by reactive sputtering using an additional blind

    SciTech Connect

    Link, M.; Schreiter, M.; Weber, J.; Gabl, R.; Pitzer, D.; Primig, R.; Wersing, W.; Assouar, M.B.; Elmazria, O.

    2006-03-15

    This article reports on the growth and characterization of polycrystalline ZnO films having c axis inclined up to 16 deg. with respect to the substrate normal. These films allow the excitation of shear and longitudinal waves with comparable electromechanical coupling constants and are of significant interest for thin film bulk acoustic resonators (FBARs). The films are deposited on silicon substrates covered by Al{sub 2}O{sub 3} and SiO{sub 2} buffer layers under low pressure using a modified reactive dc-pulsed magnetron sputtering system. A blind has been positioned between target and substrate, allowing oblique particle incidence without tilting the wafer. The study of structural properties of the deposited ZnO films by x-ray diffraction and scanning electron microscopy has permitted to show the presence of the inclined structure. Electromechanical coupling constants K up to 13% have been extracted for shear-mode excitation using highly overmoded FBARs.

  10. Effect of gamma irradiation on Schottky-contacted vertically aligned ZnO nanorod-based hydrogen sensor.

    PubMed

    Ranwa, Sapana; Barala, Surendra Singh; Fanetti, Mattia; Kumar, Mahesh

    2016-08-26

    We report the impact of gamma irradiation on the performance of a gold Schottky-contacted ZnO nanorod-based hydrogen sensor. RF-sputtered vertically aligned highly c-axis-oriented ZnO NRs were grown on Si(100) substrate. X-ray diffraction shows no significant change in crystal structure at low gamma doses from 1 to 5 kGy. As gamma irradiation doses increase to 10 kGy, the single crystalline ZnO structure converts to polycrystalline. The photoluminescence spectra also shows suppression of the near-band emission peak and the huge wide-band spectrum indicates the generation of structural defects at high gamma doses. At 1 kGy, the hydrogen sensor response was enhanced from 67% to 77% for 1% hydrogen in pure argon at a 150 °C operating temperature. However, at 10 kGy, the relative response decreases to 33.5%. High gamma irradiation causes displacement damage and defects in ZnO NRs, and as a result, degrades the sensor's performance as a result. Low gamma irradiation doses activate the ZnO NR surface through ionization, which enhances the sensor performance. The relative response of the hydrogen sensor was enhanced by ∼14.9% with respect to pristine ZnO using 1 kGy gamma ray treatment. PMID:27418478

  11. Effect of gamma irradiation on Schottky-contacted vertically aligned ZnO nanorod-based hydrogen sensor

    NASA Astrophysics Data System (ADS)

    Ranwa, Sapana; Singh Barala, Surendra; Fanetti, Mattia; Kumar, Mahesh

    2016-08-01

    We report the impact of gamma irradiation on the performance of a gold Schottky-contacted ZnO nanorod-based hydrogen sensor. RF-sputtered vertically aligned highly c-axis-oriented ZnO NRs were grown on Si(100) substrate. X-ray diffraction shows no significant change in crystal structure at low gamma doses from 1 to 5 kGy. As gamma irradiation doses increase to 10 kGy, the single crystalline ZnO structure converts to polycrystalline. The photoluminescence spectra also shows suppression of the near-band emission peak and the huge wide-band spectrum indicates the generation of structural defects at high gamma doses. At 1 kGy, the hydrogen sensor response was enhanced from 67% to 77% for 1% hydrogen in pure argon at a 150 °C operating temperature. However, at 10 kGy, the relative response decreases to 33.5%. High gamma irradiation causes displacement damage and defects in ZnO NRs, and as a result, degrades the sensor’s performance as a result. Low gamma irradiation doses activate the ZnO NR surface through ionization, which enhances the sensor performance. The relative response of the hydrogen sensor was enhanced by ∼14.9% with respect to pristine ZnO using 1 kGy gamma ray treatment.

  12. Prism Window for Optical Alignment

    NASA Technical Reports Server (NTRS)

    Tang, Hong

    2008-01-01

    A prism window has been devised for use, with an autocollimator, in aligning optical components that are (1) required to be oriented parallel to each other and/or at a specified angle of incidence with respect to a common optical path and (2) mounted at different positions along the common optical path. The prism window can also be used to align a single optical component at a specified angle of incidence. Prism windows could be generally useful for orienting optical components in manufacture of optical instruments. "Prism window" denotes an application-specific unit comprising two beam-splitter windows that are bonded together at an angle chosen to obtain the specified angle of incidence.

  13. Temperature-dependent growth of LaAlO{sub 3} films on YBa{sub 2}Cu{sub 3}O{sub 7} C-axis films for multilayer structures

    SciTech Connect

    Hawley, M.E.; Houlton, R.J.; Raistrick, I.A.; Garzon, F.H.

    1995-01-01

    Fabrication of ultra smooth films, free of micro-shorts, is essential to the development of High Temperature Superconducting (HTS) thin film devices. One such example is a SNS junction consisting of two HTS layers separated by a uniformly smooth continuous barrier material. Other schemes under consideration require multilayer structures of up to 5 - 7 epitaxially grown layers of complex oxide material. Successful fabrication of such devices necessitates understanding the epitaxial growth of polycrystalline oxide films on polycrystalline film templates. Toward this end we have developed a set of deposition parameters that produce high quality epitaxial insulating layers suitable for HTS device applications. All films in this study were grown by off-axis RF magnetron sputter deposition. LaAlO{sub 3} films were deposited over MgO grown YBa{sub 2}Cu{sub 3}O{sub 7} (YBCO) c-axis thin films at temperatures ranging from 200 to 700C and on virgin substrates at 600C. Atomic Force Microscopy, eddy current measurements, and x-ray diffraction techniques were used to monitor the effect of growth conditions on the resulting film crystallinity, nanostructure, and electrical properties. Ex-situ interrupted growth characterization of these materials has yielded new insight into the processes that control the growth mechanism and resulting microstructure. All films were polycrystalline. Below 600C, LaAlO{sub 3} films were not epitaxial while films grown at 650C showed some <200> orientation. The shape of the underlying YBCO film is most clearly evident for the film grown at 400C. Surface roughness depended on the appearance of crystals on the film surface. The superconducting properties of the underlying YBCO film required O{sub 2} annealing prior to deposition of the LaAlO{sub 3} layer.

  14. DNA Align Editor: DNA Alignment Editor Tool

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The SNPAlignEditor is a DNA sequence alignment editor that runs on Windows platforms. The purpose of the program is to provide an intuitive, user-friendly tool for manual editing of multiple sequence alignments by providing functions for input, editing, and output of nucleotide sequence alignments....

  15. Effect on C-axis transport properties of a critical state in Bi{sub 2}Sr{sub 2}CaCu{sub 2}O{sub 8}

    SciTech Connect

    Cho, J.H.; Maley, M.P.; Bulaevskii, L.N.

    1995-12-31

    At low temperatures, the c-axis transport properties of Bi{sub 2}Sr{sub 2}CaCu{sub 2}O{sub 8} single crystals depend strongly on the magnetic field history for fields applied along the c-axis, indicating the effect of a critical state in the ab direction. In this study, the authors report zero field cooled (ZFC), field cooled warming (FCW), and field cooled cooling (FCC) c-axis transport properties. In addition, they also report magnetic relaxation measurements on the same samples to identify the c-axis dissipation mechanism. They observe a relaxation of the c-axis resistivity that follows the relaxation of the flux profile across the ab plane. By identifying the irreversible temperature vs. magnetic field for H // c, they construct a phase diagram of vortex states. Finally, they will discuss the implication of the phase diagram and the features related to the transport properties of the Josephson-coupled system and the role of pancake vortices in highly two-dimensional superconductors.

  16. Quantum oscillation of the c-axis resistivity due to entrance of pancake vortices into micro-fabricated Bi 2Sr 2CaCu 2O 8+ δ intrinsic Josephson junctions

    NASA Astrophysics Data System (ADS)

    Kakeya, I.; Fukui, K.; Kawamata, K.; Yamamoto, T.; Kadowaki, K.

    2008-04-01

    The c-axis resistance in Bi2Sr2CaCu2O8+δ intrinsic Josephson junctions (IJJs) with areas of the ab-plane less than 2 μm2 were measured as functions of applied magnetic field and angle to the crystalline axes. When the magnetic field is tilted off from the lock-in state of Josephson vortices, several sharp dips are found. The separation between the dips approaches to the value corresponding to ϕ0 with further tilting the external magnetic field. This behavior is attributed to the penetration of a quantized pancake vortex into the tiny IJJ. This argument is further supported by the result that the c-axis resistance under magnetic fields parallel to the c-axis shows identical stepwise behavior.

  17. Fiber optics welder having movable aligning mirror

    DOEpatents

    Higgins, Robert W.; Robichaud, Roger E.

    1981-01-01

    A system for welding fiber optic waveguides together. The ends of the two fibers to be joined together are accurately, collinearly aligned in a vertical orientation and subjected to a controlled, diffuse arc to effect welding and thermal conditioning. A front-surfaced mirror mounted at a 45.degree. angle to the optical axis of a stereomicroscope mounted for viewing the junction of the ends provides two orthogonal views of the interface during the alignment operation.

  18. c-Axis projected electron-positron momentum density in YBa{sub 2}Cu{sub 3}O{sub 7}

    SciTech Connect

    Bansil, A.; Mijnarends, P.E.; Smedskjaer, L.C.

    1990-11-01

    The authors present the theoretical c-axis projected electron-positron momentum density N{sub 2{gamma}}(P{sub x},p{sub y}) in YBa{sub 2}Cu{sub 3}O{sub 7} based on the local density approximation (LDA) framework along various lines in momentum space. The calculations use the Korringa-Kohn-Rostoker (KKR) band structure formalism. The anisotropic distribution defined by taking cuts through the calculated spectra along different lines in the (p{sub x},p{sub y}) plane possesses complex structures which arise from both Fermi surface effects and the anisotropy of the smoothly varying underlying background from filled bands; the maximum size of the anisotropy is about 10% of N{sub 2{gamma}}(0,0). The theoretically predicted N{sub 2{gamma}}(p{sub x},{sub y}) distribution is compared with the measured 2D-ACAR spectrum. The considerations suggest that in interpreting the 2D-ACAR data on YBa{sub 2}Cu{sub 3}O{sub 7} in terms of a band theory LDA picture, a substantial, largely isotropic, background should be subtracted from both the 2D-ACAR`s and the associated LCW-folded spectra.

  19. Mosaic Texture and Double c-Axis Periodicity of β-NiOOH: Insights from First-Principles and Genetic Algorithm Calculations.

    PubMed

    Li, Ye-Fei; Selloni, Annabella

    2014-11-20

    Fe-doped NiOx has recently emerged as a promising anode material for the oxygen evolution reaction, but the origin of the high activity is still unclear, due largely to the structural uncertainty of the active phase of NiOx. Here, we report a theoretical study of the structure of β-NiOOH, one of the active components of NiOx. Using a genetic algorithm search of crystal structures combined with dispersion-corrected hybrid density functional theory calculations, we identify two groups of favorable structures: (i) layered structures with alternate Ni(OH)2 and NiO2 layers, consistent with the doubling of the c axis observed in high resolution transmission electron microscopy (TEM) measurements, and (ii) tunnel structures isostructural with MnO2 polymorphs, which can provide a rationale for the mosaic textures observed in TEM. Analysis of the Ni ions oxidation state further indicates a disproportionation of half of the Ni(3+) cations to Ni(2+)/Ni(4+) pairs. Hybrid density functionals are found essential for a correct description of the electronic structure of β-NiOOH. PMID:26276481

  20. Low-magnetic-field operations of intrinsic Josephson junctions with a long c-axis periodicity by artificial critical-current modulations

    NASA Astrophysics Data System (ADS)

    Sakai, Shigeki; Zhao, Xia

    2007-02-01

    Flux-flow cavity resonances in intrinsic Josephson junctions (IJJs) with long c-axis periodicity by artificial critical-current (Jc) modulation are studied numerically and theoretically. For an n-1-n-1-n-1-n IJJ system with n-layer high-Jc and one-layer low-Jc alternately stacked, numerical simulation confirms fluxon penetration only in the low-Jc junctions under proper low magnetic fields. The simulation also shows pronounced cavity-resonance steps in the I-V curves of the low-Jc junctions, meaning that fluxon dynamics can be generated under much lower magnetic fields, compared to the fields for usual IJJs with homogeneous Jc. A theoretical method for describing the flux-flow cavity-resonance properties is presented. The general disperse k-ω relationship shows that, at low-k regions, the critical-current-modulated junction system can be regarded as simple homogeneous stacked junctions with a new effective thickness and a new inductive coupling strength. For general-k cases, the cavity-resonant voltage steps on the I-V curves at various magnetic fields can be well indexed by integers, which means excellent agreement between the theoretical analysis and the numerical simulations.

  1. System Would Keep Telescope Reflector Segments Aligned

    NASA Technical Reports Server (NTRS)

    Mettler, Edward; Eldred, Daniel B.; Briggs, Hugh C.; Agronin, Michael L.; Kiceniuk, Taras

    1991-01-01

    Proposed actuation system maintains alignments of reflector segments of large telescope. Sensors measure positions and orientations of segments. Figure-control computer calculates orientation and figure of overall reflector surface from sensor data. Responding to computer output, servocontroller for each actuator corrects piston and tilt errors of each segment. Actuators adjust segments in response to sensed positions. Concept applicable to such large segmented space-based reflectors as those used in communication and in collection of solar energy.

  2. Capacitive Sensors And Targets Would Measure Alignments

    NASA Technical Reports Server (NTRS)

    Jenstrom, Del T.

    1994-01-01

    Multiple capacitive sensors and active targets used to measure distance between, and relative orientation of, two objects. Sensed target signals processed and used by control systems to align objects to be joined. Shapes, sizes, and layouts of sensors and targets optimized for specific application. Particular layout of targets and sensors enables determination of relative position and orientation of two objects in all six degrees of freedom.

  3. Aligned mesoporous architectures and devices.

    SciTech Connect

    Brinker, C. Jeffrey; Lu, Yunfeng

    2011-03-01

    This is the final report for the Presidential Early Career Award for Science and Engineering - PECASE (LDRD projects 93369 and 118841) awarded to Professor Yunfeng Lu (Tulane University and University of California-Los Angeles). During the last decade, mesoporous materials with tunable periodic pores have been synthesized using surfactant liquid crystalline as templates, opening a new avenue for a wide spectrum of applications. However, the applications are somewhat limited by the unfavorabe pore orientation of these materials. Although substantial effort has been devoted to align the pore channels, fabrication of mesoporous materials with perpendicular pore channels remains challenging. This project focused on fabrication of mesoporous materials with perpendicularly aligned pore channels. We demonstrated structures for use in water purification, separation, sensors, templated synthesis, microelectronics, optics, controlled release, and highly selective catalysts.

  4. Anomalous dependence of c-axis polarized Fe B1g phonon mode with Fe and Se concentrations in Fe1+yTe1-xSex

    NASA Astrophysics Data System (ADS)

    Um, Y. J.; Subedi, A.; Toulemonde, P.; Ganin, A. Y.; Boeri, L.; Rahlenbeck, M.; Liu, Y.; Lin, C. T.; Carlsson, S. J. E.; Sulpice, A.; Rosseinsky, M. J.; Keimer, B.; Le Tacon, M.

    2012-02-01

    We report on an investigation of the lattice dynamical properties in a range of Fe1+yTe1-xSex compounds, with special emphasis on the c-axis polarized vibration of Fe with B1g symmetry, a Raman active mode common to all families of Fe-based superconductors. We have carried out a systematic study of the temperature dependence of this phonon mode as a function of Se x and excess Fe y concentrations. In parent compound Fe1+yTe, we observe an unconventional broadening of the phonon between room temperature and magnetic ordering temperature TN. The situation smoothly evolves toward a regular anharmonic behavior as Te is substituted for Se and long-range magnetic order is replaced by superconductivity. Irrespective to Se contents, excess Fe is shown to provide an additional damping channel for the B1g phonon at low temperatures. We performed density functional theory ab initio calculations within the local density approximation to calculate the phonon frequencies, including magnetic polarization and Fe nonstoichiometry in the virtual crystal approximation. We obtained a good agreement with the measured phonon frequencies in the Fe-deficient samples, while the effects of Fe excess are poorly reproduced. This may be due to excess Fe-induced local magnetism and low-energy magnetic fluctuations that cannot be treated accurately within these approaches. As recently revealed by neutron scattering and muon spin rotation studies, these phenomena occur in the temperature range where anomalous decay of the B1g phonon is observed and suggests a peculiar coupling of this mode with local moments and spin fluctuations in Fe1+yTe1-xSex.

  5. Intrinsic alignments of galaxies in the EAGLE and cosmo-OWLS simulations

    NASA Astrophysics Data System (ADS)

    Velliscig, Marco; Cacciato, Marcello; Schaye, Joop; Hoekstra, Henk; Bower, Richard G.; Crain, Robert A.; van Daalen, Marcel P.; Furlong, Michelle; McCarthy, I. G.; Schaller, Matthieu; Theuns, Tom

    2015-12-01

    We report results for the alignments of galaxies in the EAGLE and cosmo-OWLS hydrodynamical cosmological simulations as a function of galaxy separation (-1 ≤ log10(r/[ h-1 Mpc]) ≤ 2) and halo mass (10.7 ≤ log10(M200/[h-1 M⊙]) ≤ 15). We focus on two classes of alignments: the orientations of galaxies with respect to either the directions to, or the orientations of, surrounding galaxies. We find that the strength of the alignment is a strongly decreasing function of the distance between galaxies. For galaxies hosted by the most massive haloes in our simulations the alignment can remain significant up to ˜100 Mpc. Galaxies hosted by more massive haloes show stronger alignment. At a fixed halo mass, more aspherical or prolate galaxies exhibit stronger alignments. The spatial distribution of satellites is anisotropic and significantly aligned with the major axis of the main host halo. The major axes of satellite galaxies, when all stars are considered, are preferentially aligned towards the centre of the main host halo. The predicted projected direction-orientation alignment, ɛg+(rp), is in broad agreement with recent observations. We find that the orientation-orientation alignment is weaker than the orientation-direction alignment on all scales. Overall, the strength of galaxy alignments depends strongly on the subset of stars that are used to measure the orientations of galaxies and it is always weaker than the alignment of dark matter haloes. Thus, alignment models that use halo orientation as a direct proxy for galaxy orientation overestimate the impact of intrinsic galaxy alignments.

  6. Well-aligned polycrystalline lanthanum silicate oxyapatite grown by reactive diffusion between solid La2SiO5 and gases [SiO+1/2O2

    NASA Astrophysics Data System (ADS)

    Fukuda, Koichiro; Hasegawa, Ryo; Kitagawa, Takuya; Nakamori, Hiroshi; Asaka, Toru; Berghout, Abid; Béchade, Emilie; Masson, Olivier; Jouin, Jenny; Thomas, Philippe

    2016-03-01

    The c-axis-oriented polycrystalline lanthanum silicate oxyapatite, La9.48(Si5.89□0.11)O26 (□ denotes a vacancy in the Si site), was successfully prepared by the reactive diffusion between randomly grain-oriented La2SiO5 polycrystal and [SiO+1/2O2] gases at 1873 K in Ar atmosphere. The polycrystal was characterized using optical microscopy, scanning electron microscopy equipped with energy dispersive X-ray spectroscopy, micro-Raman spectroscopy, X-ray diffractometry, and impedance spectroscopy. The crystal structure (space group P63/m) showed the deficiency of Si site at ca. 1.9%. The bulk oxide-ion conductivity along the grain-alignment direction steadily increased from 9.2 × 10-3 to 1.17 × 10-2 S/cm with increasing temperature from 923 to 1073 K. The activation energy of conduction was 0.23(2) eV.

  7. Galaxy Alignments: Observations and Impact on Cosmology

    NASA Astrophysics Data System (ADS)

    Kirk, Donnacha; Brown, Michael L.; Hoekstra, Henk; Joachimi, Benjamin; Kitching, Thomas D.; Mandelbaum, Rachel; Sifón, Cristóbal; Cacciato, Marcello; Choi, Ami; Kiessling, Alina; Leonard, Adrienne; Rassat, Anais; Schäfer, Björn Malte

    2015-11-01

    Galaxy shapes are not randomly oriented, rather they are statistically aligned in a way that can depend on formation environment, history and galaxy type. Studying the alignment of galaxies can therefore deliver important information about the physics of galaxy formation and evolution as well as the growth of structure in the Universe. In this review paper we summarise key measurements of galaxy alignments, divided by galaxy type, scale and environment. We also cover the statistics and formalism necessary to understand the observations in the literature. With the emergence of weak gravitational lensing as a precision probe of cosmology, galaxy alignments have taken on an added importance because they can mimic cosmic shear, the effect of gravitational lensing by large-scale structure on observed galaxy shapes. This makes galaxy alignments, commonly referred to as intrinsic alignments, an important systematic effect in weak lensing studies. We quantify the impact of intrinsic alignments on cosmic shear surveys and finish by reviewing practical mitigation techniques which attempt to remove contamination by intrinsic alignments.

  8. Galaxy pairs align with Galactic filaments

    NASA Astrophysics Data System (ADS)

    Tempel, E.; Tamm, A.

    2015-04-01

    Context. Gravitational collapse theory and numerical simulations suggest that the velocity field within large-scale galaxy filaments is dominated by motions along the filaments. Aims: Our aim is to check whether observational data reveal any preferred orientation of galaxy pairs with respect to the underlying filaments as a result of the expectedly anisotropic velocity field. Methods: We use galaxy pairs and galaxy filaments identified from Sloan Digital Sky Survey data. For filament extraction, we use the Bisous model that is based on the marked point process technique. During the filament detection, we use the centre point of each pair instead of the positions of galaxies to avoid a built-in influence of pair orientation on the filament construction. For pairs lying within filaments (3012 cases), we calculate the angle between the line connecting the galaxies of each pair and their host filaments. To avoid redshift-space distortions, the angle is measured in the plane of the sky. Results: The alignment analysis shows that the orientation of galaxy pairs correlates strongly with their host filaments. The alignment signal is stronger for loose pairs, with at least 25% excess of aligned pairs compared to a random distribution. The alignment of galaxy pairs and filaments measured from the observational data is in good agreement with the alignment in the Millennium simulation and thus provides support to the ΛCDM formalism.

  9. Nearest Alignment Space Termination

    2006-07-13

    Near Alignment Space Termination (NAST) is the Greengenes algorithm that matches up submitted sequences with the Greengenes database to look for similarities and align the submitted sequences based on those similarities.

  10. Shiva automatic pinhole alignment

    SciTech Connect

    Suski, G.J.

    1980-09-05

    This paper describes a computer controlled closed loop alignment subsystem for Shiva, which represents the first use of video sensors for large laser alignment at LLNL. The techniques used on this now operational subsystem are serving as the basis for all closed loop alignment on Nova, the 200 terawatt successor to Shiva.

  11. Fast statistical alignment.

    PubMed

    Bradley, Robert K; Roberts, Adam; Smoot, Michael; Juvekar, Sudeep; Do, Jaeyoung; Dewey, Colin; Holmes, Ian; Pachter, Lior

    2009-05-01

    We describe a new program for the alignment of multiple biological sequences that is both statistically motivated and fast enough for problem sizes that arise in practice. Our Fast Statistical Alignment program is based on pair hidden Markov models which approximate an insertion/deletion process on a tree and uses a sequence annealing algorithm to combine the posterior probabilities estimated from these models into a multiple alignment. FSA uses its explicit statistical model to produce multiple alignments which are accompanied by estimates of the alignment accuracy and uncertainty for every column and character of the alignment--previously available only with alignment programs which use computationally-expensive Markov Chain Monte Carlo approaches--yet can align thousands of long sequences. Moreover, FSA utilizes an unsupervised query-specific learning procedure for parameter estimation which leads to improved accuracy on benchmark reference alignments in comparison to existing programs. The centroid alignment approach taken by FSA, in combination with its learning procedure, drastically reduces the amount of false-positive alignment on biological data in comparison to that given by other methods. The FSA program and a companion visualization tool for exploring uncertainty in alignments can be used via a web interface at http://orangutan.math.berkeley.edu/fsa/, and the source code is available at http://fsa.sourceforge.net/. PMID:19478997

  12. Fragment oriented molecular shapes.

    PubMed

    Hain, Ethan; Camacho, Carlos J; Koes, David Ryan

    2016-05-01

    Molecular shape is an important concept in drug design and virtual screening. Shape similarity typically uses either alignment methods, which dynamically optimize molecular poses with respect to the query molecular shape, or feature vector methods, which are computationally less demanding but less accurate. The computational cost of alignment can be reduced by pre-aligning shapes, as is done with the Volumetric-Aligned Molecular Shapes (VAMS) method. Here, we introduce and evaluate fragment oriented molecular shapes (FOMS), where shapes are aligned based on molecular fragments. FOMS enables the use of shape constraints, a novel method for precisely specifying molecular shape queries that provides the ability to perform partial shape matching and supports search algorithms that function on an interactive time scale. When evaluated using the challenging Maximum Unbiased Validation dataset, shape constraints were able to extract significantly enriched subsets of compounds for the majority of targets, and FOMS matched or exceeded the performance of both VAMS and an optimizing alignment method of shape similarity search. PMID:27085751

  13. AIMFAST: Alignment Implementation for Manufacturing

    SciTech Connect

    2012-09-13

    AIMFAST is a software code used to align facets on a dish concentrator to a specific aimpoint strategy to minimize peak fluxes and maximize system optical performance. AIMFAST uses a large monitor or projections screen to display fringe patterns, and a machine vision camera to image the reflection of these patterns in the subject dish mirrors. From these images, a detailed map of surface normals can be generated and compared to design or fitted mirror shapes. This fitted comparison is then used to develop a single vector representing the orientation of the facets relative to the design orientation, and provide near-real-time adjustment information to a communicating computer. The communicating computer can display adjustments or directly interface with adjustment tools. The software for the communicating computer is specific to the implementation and is not a part of AIMFAST.

  14. The Alignment of Galaxy Structures

    NASA Astrophysics Data System (ADS)

    Biernacka, M.; Panko, E.; Bajan, K.; Godłowski, W.; Flin, P.

    2015-11-01

    We analyzed the orientation of the sample of ACO galaxy clusters. We examined the alignment in a subsample of 1056 galaxy structures taken from the Panko-Flin (2006) Catalog with known BM morphological types. We were looking for a correlation between the orientation of the cluster and the positions of neighboring clusters. The Binggeli effect (the excess of small values of the Δθ angles between the direction toward neighboring clusters and the cluster position angle) is observed, having a range up to about 45 h-1 Mpc. The strongest effect was found for elongated BM type I clusters. This is probably connected with the origins of the supergiant galaxy and with cluster formation along a long filament or plane in a supercluster.

  15. AIMFAST: Alignment Implementation for Manufacturing

    2012-09-13

    AIMFAST is a software code used to align facets on a dish concentrator to a specific aimpoint strategy to minimize peak fluxes and maximize system optical performance. AIMFAST uses a large monitor or projections screen to display fringe patterns, and a machine vision camera to image the reflection of these patterns in the subject dish mirrors. From these images, a detailed map of surface normals can be generated and compared to design or fitted mirrormore » shapes. This fitted comparison is then used to develop a single vector representing the orientation of the facets relative to the design orientation, and provide near-real-time adjustment information to a communicating computer. The communicating computer can display adjustments or directly interface with adjustment tools. The software for the communicating computer is specific to the implementation and is not a part of AIMFAST.« less

  16. IAIMFAST: Alignment Implementation for Manufacturing

    2013-08-29

    AIMFAST is a software code used to align facets on a dish concentrator to a specific aimpoint strategy to minimize peak fluxes and maximize system optical performance. AIM FAST uses a large monitor to display fringe patterns, and a machine vision camera to image the reflection of these patterns in the subject dish mirrors. From these images, a detailed map of surface normals can be generated and compared to design or fitted mirror shapes. Thismore » fitted comparison is then used to develop a single vector representing the orientation of the facets relative to the design orientation, and provide near-real-time adjustment information to a communicating computer. The communicating computer can display adjustments or directly interface with adjustment tools.« less

  17. Anisotropic fiber alignment in composite structures

    DOEpatents

    Graham, A.L.; Mondy, L.A.; Guell, D.C.

    1993-11-16

    High strength material composite structures are formed with oriented fibers to provide controlled anisotropic fibers. Fibers suspended in non-dilute concentrations (e.g., up to 20 volume percent for fibers having an aspect ratio of 20) in a selected medium are oriented by moving an axially spaced array of elements in the direction of desired fiber alignment. The array elements are generally perpendicular to the desired orientation. The suspension medium may also include sphere-like particles where the resulting material is a ceramic. 5 figures.

  18. Anisotropic fiber alignment in composite structures

    DOEpatents

    Graham, Alan L.; Mondy, Lisa A.; Guell, David C.

    1993-01-01

    High strength material composite structures are formed with oriented fibers to provide controlled anisotropic fibers. Fibers suspended in non-dilute concentrations (e.g., up to 20 volume percent for fibers having an aspect ratio of 20) in a selected medium are oriented by moving an axially spaced array of elements in the direction of desired fiber alignment. The array elements are generally perpendicular to the desired orientation. The suspension medium may also include sphere-like particles where the resulting material is a ceramic.

  19. Alignment Stage for a Cryogenic Dilatometer

    NASA Technical Reports Server (NTRS)

    Dudik, Matthew; Moore, Donald

    2005-01-01

    A three-degree-of-freedom alignment stage has been designed and built for use in a cryogenic dilatometer that is used to measure thermal strains. The alignment stage enables precise adjustments of the positions and orientations of optical components to be used in the measurements and, once adjustments have been completed, keeps the components precisely aligned during cryogenic-dilatometer operations that can last as long as several days. The alignment stage includes a case, a circular tilt/tip platform, and a variety of flexural couplings between the case and the platform, all machined from a single block of the low-thermal-expansion iron/nickel alloy Invar, in order to minimize effects of temperature gradients and to obtain couplings that are free of stiction and friction. There are three sets of flexural couplings clocked at equal angles of 120 degrees around the platform, constituting a three-point kinematic support system.

  20. Girder Alignment Plan

    SciTech Connect

    Wolf, Zackary; Ruland, Robert; LeCocq, Catherine; Lundahl, Eric; Levashov, Yurii; Reese, Ed; Rago, Carl; Poling, Ben; Schafer, Donald; Nuhn, Heinz-Dieter; Wienands, Uli; /SLAC

    2010-11-18

    The girders for the LCLS undulator system contain components which must be aligned with high accuracy relative to each other. The alignment is one of the last steps before the girders go into the tunnel, so the alignment must be done efficiently, on a tight schedule. This note documents the alignment plan which includes efficiency and high accuracy. The motivation for girder alignment involves the following considerations. Using beam based alignment, the girder position will be adjusted until the beam goes through the center of the quadrupole and beam finder wire. For the machine to work properly, the undulator axis must be on this line and the center of the undulator beam pipe must be on this line. The physics reasons for the undulator axis and undulator beam pipe axis to be centered on the beam are different, but the alignment tolerance for both are similar. In addition, the beam position monitor must be centered on the beam to preserve its calibration. Thus, the undulator, undulator beam pipe, quadrupole, beam finder wire, and beam position monitor axes must all be aligned to a common line. All relative alignments are equally important, not just, for example, between quadrupole and undulator. We begin by making the common axis the nominal beam axis in the girder coordinate system. All components will be initially aligned to this axis. A more accurate alignment will then position the components relative to each other, without incorporating the girder itself.

  1. Liquid crystallinity driven highly aligned large graphene oxide composites

    SciTech Connect

    Lee, Kyung Eun; Oh, Jung Jae; Yun, Taeyeong; Kim, Sang Ouk

    2015-04-15

    Graphene is an emerging graphitic carbon materials, consisting of sp{sup 2} hybridized two dimensinal honeycomb structure. It has been widely studied to incorporate graphene with polymer to utilize unique property of graphene and reinforce electrical, mechanical and thermal property of polymer. In composite materials, orientation control of graphene significantly influences the property of composite. Until now, a few method has been developed for orientation control of graphene within polymer matrix. Here, we demonstrate facile fabrication of high aligned large graphene oxide (LGO) composites in polydimethylsiloxane (PDMS) matrix exploiting liquid crystallinity. Liquid crystalline aqueous dispersion of LGO is parallel oriented within flat confinement geometry. Freeze-drying of the aligned LGO dispersion and subsequent infiltration with PDMS produce highly aligned LGO/PDMS composites. Owing to the large shape anisotropy of LGO, liquid crystalline alignment occurred at low concentration of 2 mg/ml in aqueous dispersion, which leads to the 0.2 wt% LGO loaded composites. - Graphical abstract: Liquid crystalline LGO aqueous dispersions are spontaneous parallel aligned between geometric confinement for highly aligned LGO/polymer composite fabrication. - Highlights: • A simple fabrication method for highly aligned LGO/PDMS composites is proposed. • LGO aqueous dispersion shows nematic liquid crystalline phase at 0.8 mg/ml. • In nematic phase, LGO flakes are highly aligned by geometric confinement. • Infiltration of PDMS into freeze-dried LGO allows highly aligned LGO/PDMS composites.

  2. Smart and precise alignment of optical systems

    NASA Astrophysics Data System (ADS)

    Langehanenberg, Patrik; Heinisch, Josef; Stickler, Daniel

    2013-09-01

    For the assembly of any kind of optical systems the precise centration of every single element is of particular importance. Classically the precise alignment of optical components is based on the precise centering of all components to an external axis (usually a high-precision rotary spindle axis). Main drawback of this timeconsuming process is that it is significantly sensitive to misalignments of the reference (e.g. the housing) axis. In order to facilitate process in this contribution we present a novel alignment strategy for the TRIOPTICS OptiCentric® instrument family that directly aligns two elements with respect to each other by measuring the first element's axis and using this axis as alignment reference without the detour of considering an external reference. According to the optical design any axis in the system can be chosen as target axis. In case of the alignment to a barrel this axis is measured by using a distance sensor (e.g., the classically used dial indicator). Instead of fine alignment the obtained data is used for the calculation of its orientation within the setup. Alternatively, the axis of an optical element (single lens or group of lenses) whose orientation is measured with the standard OptiCentric MultiLens concept can be used as a reference. In the instrument's software the decentering of the adjusting element to the calculated axis is displayed in realtime and indicated by a target mark that can be used for the manual alignment. In addition, the obtained information can also be applied for active and fully automated alignment of lens assemblies with the help of motorized actuators.

  3. Mechanical alignment of particles for use in fabricating superconducting and permanent magnetic materials

    DOEpatents

    Nellis, William J.; Maple, M. Brian

    1992-01-01

    A method for mechanically aligning oriented superconducting or permanently magnetic materials for further processing into constructs. This pretreatment optimizes the final crystallographic orientation and, thus, properties in these constructs. Such materials as superconducting fibers, needles and platelets are utilized.

  4. Control of magnetization reversal in oriented strontium ferrite thin films

    SciTech Connect

    Roy, Debangsu Anil Kumar, P. S.

    2014-02-21

    Oriented Strontium Ferrite films with the c axis orientation were deposited with varying oxygen partial pressure on Al{sub 2}O{sub 3}(0001) substrate using Pulsed Laser Deposition technique. The angle dependent magnetic hysteresis, remanent coercivity, and temperature dependent coercivity had been employed to understand the magnetization reversal of these films. It was found that the Strontium Ferrite thin film grown at lower (higher) oxygen partial pressure shows Stoner-Wohlfarth type (Kondorsky like) reversal. The relative importance of pinning and nucleation processes during magnetization reversal is used to explain the type of the magnetization reversal with different oxygen partial pressure during growth.

  5. Vertically Oriented Growth of GaN Nanorods on Si Using Graphene as an Atomically Thin Buffer Layer.

    PubMed

    Heilmann, Martin; Munshi, A Mazid; Sarau, George; Göbelt, Manuela; Tessarek, Christian; Fauske, Vidar T; van Helvoort, Antonius T J; Yang, Jianfeng; Latzel, Michael; Hoffmann, Björn; Conibeer, Gavin; Weman, Helge; Christiansen, Silke

    2016-06-01

    The monolithic integration of wurtzite GaN on Si via metal-organic vapor phase epitaxy is strongly hampered by lattice and thermal mismatch as well as meltback etching. This study presents single-layer graphene as an atomically thin buffer layer for c-axis-oriented growth of vertically aligned GaN nanorods mediated by nanometer-sized AlGaN nucleation islands. Nanostructures of similar morphology are demonstrated on graphene-covered Si(111) as well as Si(100). High crystal and optical quality of the nanorods are evidenced through scanning transmission electron microscopy, micro-Raman, and cathodoluminescence measurements supported by finite-difference time-domain simulations. Current-voltage characteristics revealed high vertical conduction of the as-grown GaN nanorods through the Si substrates. These findings are substantial to advance the integration of GaN-based devices on any substrates of choice that sustains the GaN growth temperatures, thereby permitting novel designs of GaN-based heterojunction device concepts. PMID:27124605

  6. EDITORIAL: Optical orientation Optical orientation

    NASA Astrophysics Data System (ADS)

    SAME ADDRESS *, Yuri; Landwehr, Gottfried

    2008-11-01

    priority of the discovery in the literature, which was partly caused by the existence of the Iron Curtain. I had already enjoyed contact with Boris in the 1980s when the two volumes of Landau Level Spectroscopy were being prepared [2]. He was one of the pioneers of magneto-optics in semiconductors. In the 1950s the band structure of germanium and silicon was investigated by magneto-optical methods, mainly in the United States. No excitonic effects were observed and the band structure parameters were determined without taking account of excitons. However, working with cuprous oxide, which is a direct semiconductor with a relative large energy gap, Zakharchenya and his co-worker Seysan showed that in order to obtain correct band structure parameters, it is necessary to take excitons into account [3]. About 1970 Boris started work on optical orientation. Early work by Hanle in Germany in the 1920s on the depolarization of luminescence in mercury vapour by a transverse magnetic field was not appreciated for a long time. Only in the late 1940s did Kastler and co-workers in Paris begin a systematic study of optical pumping, which led to the award of a Nobel prize. The ideas of optical pumping were first applied by Georges Lampel to solid state physics in 1968. He demonstrated optical orientation of free carriers in silicon. The detection method was nuclear magnetic resonance; optically oriented free electrons dynamically polarized the 29Si nuclei of the host lattice. The first optical detection of spin orientation was demonstrated by with the III-V semiconductor GaSb by Parsons. Due to the various interaction mechanisms of spins with their environment, the effects occurring in semiconductors are naturally more complex than those in atoms. Optical detection is now the preferred method to detect spin alignment in semiconductors. The orientation of spins in crystals pumped with circularly polarized light is deduced from the degree of circular polarization of the recombination

  7. Critical currents of aligned grains of Tl-Ba-Ca-Cu-O compounds

    NASA Technical Reports Server (NTRS)

    Fang, M. M.; Finnemore, D. K.; Farrell, D. E.; Bansal, N. R.

    1989-01-01

    A study of irreversibility in the magnetization curves of Tl2Ba2Ca2Cu3O10 and Tl2Ba2Ca1Cu2O8 was undertaken to determine the intragranular critical currents and the effects of flux-creep in grain-aligned samples of these materials. For fields of greater than 0.3 T, and H parallel to c axis, the critical supercurrent falls approximately exponentially with both magnetic field and temperature. Flux-creep is found to be linear in the logarithm of time at low fields over a wide temperature range.

  8. Aligned Immobilization of Proteins Using AC Electric Fields.

    PubMed

    Laux, Eva-Maria; Knigge, Xenia; Bier, Frank F; Wenger, Christian; Hölzel, Ralph

    2016-03-01

    Protein molecules are aligned and immobilized from solution by AC electric fields. In a single-step experiment, the enhanced green fluorescent proteins are immobilized on the surface as well as at the edges of planar nanoelectrodes. Alignment is found to follow the molecules' geometrical shape with their longitudinal axes parallel to the electric field. Simultaneous dielectrophoretic attraction and AC electroosmotic flow are identified as the dominant forces causing protein movement and alignment. Molecular orientation is determined by fluorescence microscopy based on polarized excitation of the proteins' chromophores. The chromophores' orientation with respect to the whole molecule supports X-ray crystal data. PMID:26779699

  9. Further solar alignments of Greek Byzantine churches

    NASA Astrophysics Data System (ADS)

    Liritzis, I.; Vasiliou, H.

    Following the recent work on the solar alignment of Greek byzantine churches (Liritzis and Vassiliou 2006 a,b,c) the solar orientations of twenty one more churches are presented. The question examined is if the day of solar rise across the eastern direction of the church is related with the feast day of Patron Saint. Measurements were carried out with magnetic compass, inclinometer, portable GPS and appropriate corrections for the solar declination. The alignments towards eastern sunrise were examined for various angular altitudes of the perceptible horizon. At least for all Rhodean churches the patron's day is met when sun oblique path crosses horizon a few degrees beyond the intersection of extrapolated eastern axis of the church with horizons skyline. Therefore, taken the orientation as the glitter of first sunrays -early dawn- correlation of thirteen present churches are aligned near the autumnal equinox, three have relation with the feast of patron saint, four are related to the other important feast of Christianity and one seem orientated randomly. However accounting for a due east sun position a few degrees above horizon in early liturgy hours (6:30 - 9:30 am) all the Rhodean alignments coincides with Saint's name day.

  10. Alignment Cube with One Diffractive Face

    NASA Technical Reports Server (NTRS)

    Ohl, Raymond G.; Sampler, Henry P.; Strojny, Carl R.; Hagopian, John G.; McMann, Joseph C.

    2006-01-01

    An enhanced alignment cube has been invented for use in a confined setting (e.g., a cryogenic chamber) in which optical access may be limited to a single line of sight. Whereas traditional alignment-cube practice entails the use of two theodolites aimed along two lines of sight, the enhanced alignment cube yields complete alignment information through use of a single theodolite aimed along a single line of sight. Typically, an alignment cube is placed in contact with a datum surface or other reference feature on a scientific instrument during assembly or testing of the instrument. The alignment cube is then used in measuring a small angular deviation of the feature from a precise required orientation. Commonly, the deviation is expressed in terms of rotations (Rx,Ry,Rz) of the cube about the corresponding Cartesian axes (x,y,z). In traditional practice, in order to measure all three rotations, it is necessary to use two theodolites aimed at two orthogonal faces of the alignment cube, as shown in the upper part of the figure. To be able to perform such a measurement, one needs optical access to these two faces. In the case of an alignment cube inside a cryogenic chamber or other enclosed space, the optical-access requirement translates to a requirement for two windows located along the corresponding two orthogonal lines of sight into the chamber. In a typical application, it is difficult or impossible to provide two windows. The present enhanced version of the alignment cube makes it possible to measure all three rotations by use of a single line of sight, thereby obviating a second window.

  11. Horizontal carbon nanotube alignment.

    PubMed

    Cole, Matthew T; Cientanni, Vito; Milne, William I

    2016-09-21

    The production of horizontally aligned carbon nanotubes offers a rapid means of realizing a myriad of self-assembled near-atom-scale technologies - from novel photonic crystals to nanoscale transistors. The ability to reproducibly align anisotropic nanostructures has huge technological value. Here we review the present state-of-the-art in horizontal carbon nanotube alignment. For both in and ex situ approaches, we quantitatively assess the reported linear packing densities alongside the degree of alignment possible for each of these core methodologies. PMID:27546174

  12. Orthodontics and Aligners

    MedlinePlus

    ... Repairing Chipped Teeth Teeth Whitening Tooth-Colored Fillings Orthodontics and Aligners Straighten teeth for a healthier smile. Orthodontics When consumers think about orthodontics, braces are the ...

  13. Alignability of Optical Interconnects

    NASA Astrophysics Data System (ADS)

    Beech, Russell Scott

    With the continuing drive towards higher speed, density, and functionality in electronics, electrical interconnects become inadequate. Due to optics' high speed and bandwidth, freedom from capacitive loading effects, and freedom from crosstalk, optical interconnects can meet more stringent interconnect requirements. But, an optical interconnect requires additional components, such as an optical source and detector, lenses, holographic elements, etc. Fabrication and assembly of an optical interconnect requires precise alignment of these components. The successful development and deployment of optical interconnects depend on how easily the interconnect components can be aligned and/or how tolerant the interconnect is to misalignments. In this thesis, a method of quantitatively specifying the relative difficulty of properly aligning an optical interconnect is described. Ways of using this theory of alignment to obtain design and packaging guidelines for optical interconnects are examined. The measure of the ease with which an optical interconnect can be aligned, called the alignability, uses the efficiency of power transfer as a measure of alignment quality. The alignability is related to interconnect package design through the overall cost measure, which depends upon various physical parameters of the interconnect, such as the cost of the components and the time required for fabrication and alignment. Through a mutual dependence on detector size, the relationship between an interconnect's alignability and its bandwidth, signal-to-noise ratio, and bit-error -rate is examined. The results indicate that a range of device sizes exists for which given performance threshold values are satisfied. Next, the alignability of integrated planar-optic backplanes is analyzed in detail. The resulting data show that the alignability can be optimized by varying the substrate thickness or the angle of reflection. By including the effects of crosstalk, in a multi-channel backplane, the

  14. Tidal alignment of galaxies

    NASA Astrophysics Data System (ADS)

    Blazek, Jonathan; Vlah, Zvonimir; Seljak, Uroš

    2015-08-01

    We develop an analytic model for galaxy intrinsic alignments (IA) based on the theory of tidal alignment. We calculate all relevant nonlinear corrections at one-loop order, including effects from nonlinear density evolution, galaxy biasing, and source density weighting. Contributions from density weighting are found to be particularly important and lead to bias dependence of the IA amplitude, even on large scales. This effect may be responsible for much of the luminosity dependence in IA observations. The increase in IA amplitude for more highly biased galaxies reflects their locations in regions with large tidal fields. We also consider the impact of smoothing the tidal field on halo scales. We compare the performance of this consistent nonlinear model in describing the observed alignment of luminous red galaxies with the linear model as well as the frequently used "nonlinear alignment model," finding a significant improvement on small and intermediate scales. We also show that the cross-correlation between density and IA (the "GI" term) can be effectively separated into source alignment and source clustering, and we accurately model the observed alignment down to the one-halo regime using the tidal field from the fully nonlinear halo-matter cross correlation. Inside the one-halo regime, the average alignment of galaxies with density tracers no longer follows the tidal alignment prediction, likely reflecting nonlinear processes that must be considered when modeling IA on these scales. Finally, we discuss tidal alignment in the context of cosmic shear measurements.

  15. Surface Dipole Control of Liquid Crystal Alignment.

    PubMed

    Schwartz, Jeffrey J; Mendoza, Alexandra M; Wattanatorn, Natcha; Zhao, Yuxi; Nguyen, Vinh T; Spokoyny, Alexander M; Mirkin, Chad A; Baše, Tomáš; Weiss, Paul S

    2016-05-11

    Detailed understanding and control of the intermolecular forces that govern molecular assembly are necessary to engineer structure and function at the nanoscale. Liquid crystal (LC) assembly is exceptionally sensitive to surface properties, capable of transducing nanoscale intermolecular interactions into a macroscopic optical readout. Self-assembled monolayers (SAMs) modify surface interactions and are known to influence LC alignment. Here, we exploit the different dipole magnitudes and orientations of carboranethiol and -dithiol positional isomers to deconvolve the influence of SAM-LC dipolar coupling from variations in molecular geometry, tilt, and order. Director orientations and anchoring energies are measured for LC cells employing various carboranethiol and -dithiol isomer alignment layers. The normal component of the molecular dipole in the SAM, toward or away from the underlying substrate, was found to determine the in-plane LC director orientation relative to the anisotropy axis of the surface. By using LC alignment as a probe of interaction strength, we elucidate the role of dipolar coupling of molecular monolayers to their environment in determining molecular orientations. We apply this understanding to advance the engineering of molecular interactions at the nanoscale. PMID:27090503

  16. Liquid crystallinity driven highly aligned large graphene oxide composites

    NASA Astrophysics Data System (ADS)

    Lee, Kyung Eun; Oh, Jung Jae; Yun, Taeyeong; Kim, Sang Ouk

    2015-04-01

    Graphene is an emerging graphitic carbon materials, consisting of sp2 hybridized two dimensinal honeycomb structure. It has been widely studied to incorporate graphene with polymer to utilize unique property of graphene and reinforce electrical, mechanical and thermal property of polymer. In composite materials, orientation control of graphene significantly influences the property of composite. Until now, a few method has been developed for orientation control of graphene within polymer matrix. Here, we demonstrate facile fabrication of high aligned large graphene oxide (LGO) composites in polydimethylsiloxane (PDMS) matrix exploiting liquid crystallinity. Liquid crystalline aqueous dispersion of LGO is parallel oriented within flat confinement geometry. Freeze-drying of the aligned LGO dispersion and subsequent infiltration with PDMS produce highly aligned LGO/PDMS composites. Owing to the large shape anisotropy of LGO, liquid crystalline alignment occurred at low concentration of 2 mg/ml in aqueous dispersion, which leads to the 0.2 wt% LGO loaded composites.

  17. Studies of C-Axis Charge Transport in BISMUTH(2) STRONTIUM(2) Calcium COPPER(2) OXYGEN(8 + Delta) and Anomalous Hall Effect in (LANTHANUM(0.67) CALCIUM(0.33)) Manganese OXYGEN(3)

    NASA Astrophysics Data System (ADS)

    Yi-Feng, Yan

    In this thesis I report my studies on charge transport on two perovskite metal oxides: La_ {1-x}Ca_{x}MnO_3(LCMO) --a colossal magnetoresistance oxide and Bi_2Sr_2CaCu_2O_{8+delta } (BSCCO)--a high temperature superconducting compound. Large and high quality Bi_2Sr _2CaCu_2O_{8+delta} single crystals were grown by self-flux method. The quality of the crystals were examined by x-ray diffraction and electron diffraction. I have systematically investigated the c-axis magnetoresistance (MR) of various BSCCO single crystals with different oxygen contents. With field H parallel to c-axis and the current (H//c//J), we observed that MR is negative if rho_ {c} is semiconducting and positive if rho_{c} is pseudo-metallic. We consider that the negative MR is a normal state property. We have also measured the field dependence of rho_{c} in the flux flow state (H//c//J) at fields up to 14T. Whereas rho_{c} increases rapidly in weak fields, it saturates to the extrapolated normal-state curve when the field H_ {2D} is attained (H_ {2D} is the field at which the vortex pancakes in adjacent layers are completely decoupled). At fields above H_{2D}, rho_{c} decreases slowly. We verify that this is a continuation of the negative MR observed above Tc. We propose that the antiferromagnetic coupling along the c-axis in adjacent CuO_2 planes and spin singlet formation are the cause of negative magnetoresistance in c-axis in bilayer cuprates. We found that the c-axis resistivity in bilayer cuprates can be fitted into the following empirical formula: rho_{c}{= }a/Te^{Delta/T} + cT + d where a, c and d are temperature independent constants; Delta is called pseudogap. In Y -doped BSCCO, rho_{c} displays a logarithmic temperature dependence. The LCMO thin films used in this experiment were grown by Plasma Enhanced-MOCVD method. The Hall effect and magnetoresistance of LCMO thin films have been systematically investigated. At low temperature, the Hall effect is linear with field and positive

  18. An implicit spatial memory alignment effect.

    PubMed

    Cerles, Mélanie; Gomez, Alice; Rousset, Stéphane

    2015-09-01

    The memory alignment effect is the advantage of reasoning from a perspective which is aligned with the frame of reference used to encode an environment in memory. It usually occurs when participants have to consciously take a perspective to perform a spatial memory task. The present experiment assesses whether the memory alignment effect can occur without requiring to consciously take a given perspective, when the misaligned perspective is only perceptively provided. In others words, does the memory alignment effect still arise when it is only implicitly prompted? Thirty participants learned a sequence of four objects' positions in a room from a north-as-up survey perspective. During the testing phase, they had to point to the direction of a target object from another object ('the reference') with a fixed north-up orientation. The background behind the reference object displayed either a uniform color (control condition) or a misaligned ground-level perspective. The latter displayed a reference object's position information which was either congruent with the studied environment (congruent misaligned condition) or incongruent (incongruent misaligned condition). Mean pointing errors were higher in the congruent misaligned condition than in the control condition, whereas the incongruent misaligned condition did not differ from the control one. The present study shows that the memory alignment effect can arise without requiring a conscious misaligned perspective taking. Moreover, the perceived misaligned perspective must share the same spatial content as the memorized spatial representation in order to induce an alignment effect. PMID:26233526

  19. Alignment of liquid crystals doped with nickel nanoparticles containing different morphologies.

    PubMed

    Zhao, Dongyu; Zhou, Wei; Cui, Xiaopeng; Tian, Yu; Guo, Lin; Yang, Huai

    2011-12-22

    Uniform homeotropic and homogeneous alignment of liquid crystals (LCs) is facilely achieved by dispersing Ni nanoparticles (Ni NPs) into the LCs. The alignment mode depends on the morphology of the Ni NPs. The mechanism of NP-induced LC alignment is elucidated clearly, indicating that the perfect orientation arises from the adsorption of Ni NPs on the substrate. PMID:22102432

  20. SPEAR3 Construction Alignment

    SciTech Connect

    LeCocq, Catherine; Banuelos, Cristobal; Fuss, Brian; Gaudreault, Francis; Gaydosh, Michael; Griffin, Levirt; Imfeld, Hans; McDougal, John; Perry, Michael; Rogers, Michael; /SLAC

    2005-08-17

    An ambitious seven month shutdown of the existing SPEAR2 synchrotron radiation facility was successfully completed in March 2004 when the first synchrotron light was observed in the new SPEAR3 ring, SPEAR3 completely replaced SPEAR2 with new components aligned on a new highly-flat concrete floor. Devices such as magnets and vacuum chambers had to be fiducialized and later aligned on girder rafts that were then placed into the ring over pre-aligned support plates. Key to the success of aligning this new ring was to ensure that the new beam orbit matched the old SPEAR2 orbit so that existing experimental beamlines would not have to be reoriented. In this presentation a pictorial summary of the Alignment Engineering Group's surveying tasks for the construction of the SPEAR3 ring is provided. Details on the networking and analysis of various surveys throughout the project can be found in the accompanying paper.

  1. Corrective optics space telescope axial replacement alignment system

    NASA Astrophysics Data System (ADS)

    Slusher, Robert B.; Satter, Michael J.; Kaplan, Michael L.; Martella, Mark A.; Freymiller, Ed D.; Buzzetta, Victor

    1993-10-01

    To facilitate the accurate placement and alignment of the corrective optics space telescope axial replacement (COSTAR) structure, mechanisms, and optics, the COSTAR Alignment System (CAS) has been designed and assembled. It consists of a 20-foot optical bench, support structures for holding and aligning the COSTAR instrument at various stages of assembly, a focal plane target fixture (FPTF) providing an accurate reference to the as-built Hubble Space Telescope (HST) focal plane, two alignment translation stages with interchangeable alignment telescopes and alignment lasers, and a Zygo Mark IV interferometer with a reference sphere custom designed to allow accurate double-pass operation of the COSTAR correction optics. The system is used to align the fixed optical bench (FOB), the track, the deployable optical bench (DOB), the mechanisms, and the optics to ensure that the correction mirrors are all located in the required positions and orientations on-orbit after deployment. In this paper, the layout of the CAS is presented and the various alignment operations are listed along with the relevant alignment requirements. In addition, calibration of the necessary support structure elements and alignment aids is described, including the two-axis translation stages, the latch positions, the FPTF, and the COSTAR-mounted alignment cubes.

  2. Galaxy alignment as a probe of large-scale filaments

    NASA Astrophysics Data System (ADS)

    Rong, Yu; Liu, Yuan; Zhang, Shuang-Nan

    2016-01-01

    The orientations of the red galaxies in a filament are aligned with the orientation of the filament. We thus develop a location-alignment-method (LAM) of detecting filaments around clusters of galaxies, which uses both the alignments of red galaxies and their distributions in two-dimensional images. For the first time, the orientations of red galaxies are used as probes of filaments. We apply LAM to the environment of Coma cluster, and find four filaments (two filaments are located in sheets) in two selected regions, which are compared with the filaments detected with the method of Falco et al.. We find that LAM can effectively detect the filaments around a cluster, even with 3σ confidence level, and clearly reveal the number and overall orientations of the detected filaments. LAM is independent of the redshifts of galaxies, and thus can be applied at relatively high redshifts and to the samples of red galaxies without the information of redshifts.

  3. Precision alignment device

    DOEpatents

    Jones, N.E.

    1988-03-10

    Apparatus for providing automatic alignment of beam devices having an associated structure for directing, collimating, focusing, reflecting, or otherwise modifying the main beam. A reference laser is attached to the structure enclosing the main beam producing apparatus and produces a reference beam substantially parallel to the main beam. Detector modules containing optical switching devices and optical detectors are positioned in the path of the reference beam and are effective to produce an electrical output indicative of the alignment of the main beam. This electrical output drives servomotor operated adjustment screws to adjust the position of elements of the structure associated with the main beam to maintain alignment of the main beam. 5 figs.

  4. Precision alignment device

    DOEpatents

    Jones, Nelson E.

    1990-01-01

    Apparatus for providing automatic alignment of beam devices having an associated structure for directing, collimating, focusing, reflecting, or otherwise modifying the main beam. A reference laser is attached to the structure enclosing the main beam producing apparatus and produces a reference beam substantially parallel to the main beam. Detector modules containing optical switching devices and optical detectors are positioned in the path of the reference beam and are effective to produce an electrical output indicative of the alignment of the main beam. This electrical output drives servomotor operated adjustment screws to adjust the position of elements of the structure associated with the main beam to maintain alignment of the main beam.

  5. Hybrid vehicle motor alignment

    DOEpatents

    Levin, Michael Benjamin

    2001-07-03

    A rotor of an electric motor for a motor vehicle is aligned to an axis of rotation for a crankshaft of an internal combustion engine having an internal combustion engine and an electric motor. A locator is provided on the crankshaft, a piloting tool is located radially by the first locator to the crankshaft. A stator of the electric motor is aligned to a second locator provided on the piloting tool. The stator is secured to the engine block. The rotor is aligned to the crankshaft and secured thereto.

  6. EDITORIAL: Optical orientation Optical orientation

    NASA Astrophysics Data System (ADS)

    SAME ADDRESS *, Yuri; Landwehr, Gottfried

    2008-11-01

    priority of the discovery in the literature, which was partly caused by the existence of the Iron Curtain. I had already enjoyed contact with Boris in the 1980s when the two volumes of Landau Level Spectroscopy were being prepared [2]. He was one of the pioneers of magneto-optics in semiconductors. In the 1950s the band structure of germanium and silicon was investigated by magneto-optical methods, mainly in the United States. No excitonic effects were observed and the band structure parameters were determined without taking account of excitons. However, working with cuprous oxide, which is a direct semiconductor with a relative large energy gap, Zakharchenya and his co-worker Seysan showed that in order to obtain correct band structure parameters, it is necessary to take excitons into account [3]. About 1970 Boris started work on optical orientation. Early work by Hanle in Germany in the 1920s on the depolarization of luminescence in mercury vapour by a transverse magnetic field was not appreciated for a long time. Only in the late 1940s did Kastler and co-workers in Paris begin a systematic study of optical pumping, which led to the award of a Nobel prize. The ideas of optical pumping were first applied by Georges Lampel to solid state physics in 1968. He demonstrated optical orientation of free carriers in silicon. The detection method was nuclear magnetic resonance; optically oriented free electrons dynamically polarized the 29Si nuclei of the host lattice. The first optical detection of spin orientation was demonstrated by with the III-V semiconductor GaSb by Parsons. Due to the various interaction mechanisms of spins with their environment, the effects occurring in semiconductors are naturally more complex than those in atoms. Optical detection is now the preferred method to detect spin alignment in semiconductors. The orientation of spins in crystals pumped with circularly polarized light is deduced from the degree of circular polarization of the recombination

  7. Antares alignment gimbal positioner

    SciTech Connect

    Day, R.D.; Viswanathan, V.K.; Saxman, A.C.; Lujan, R.E.; Woodfin, G.L.; Sweatt, W.C.

    1981-01-01

    Antares is a 24-beam 40-TW carbon-dioxide (CO/sub 2/) laser fusion system currently under construction at the Los Alamos National Laboratory. The Antares alignment gimbal positioner (AGP) is an optomechanical instrument that will be used for target alignment and alignment of the 24 laser beams, as well as beam quality assessments. The AGP will be capable of providing pointing, focusing, and wavefront optical path difference, as well as aberration information at both helium-neon (He-Ne) and CO/sub 2/ wavelengths. It is designed to allow the laser beams to be aligned to any position within a 1-cm cube to a tolerance of 10 ..mu..m.

  8. EINSTEIN Cluster Alignments Revisited

    NASA Astrophysics Data System (ADS)

    Chambers, S. W.; Melott, A. L.; Miller, C. J.

    2000-12-01

    We have examined whether the major axes of rich galaxy clusters tend to point (in projection) toward their nearest neighboring cluster. We used the data of Ulmer, McMillan and Kowalski, who used x-ray morphology to define position angles. Our cluster samples, with well measured redshifts and updated positions, were taken from the MX Northern Abell Cluster Survey. The usual Kolmogorov-Smirnov test shows no significant alignment signal for nonrandom angles for all separations less than 100 Mpc/h. Refining the null hypothesis, however, with the Wilcoxon rank-sum test, reveals a high confidence signal for alignment. This confidence is highest when we restrict our sample to small nearest neighbor separations. We conclude that we have identified a more powerful tool for testing cluster-cluster alignments. Moreover, there is a strong signal in the data for alignment, consistent with a picture of hierarchical cluster formation in which matter falls into clusters along large scale filamentary structures.

  9. Two modes for dune orientation

    NASA Astrophysics Data System (ADS)

    Courrech Du Pont, Sylvain; Narteau, Clément; Gao, Xin

    2015-11-01

    Earth sand seas experience winds that blow with different strengths and from different directions in line with the seasons. In response, dune fields show a rich variety of shapes from small crescentic barchans to big star and linear dunes. Linear dunes often exhibit complex and compound patterns with different length scales and orientations, which seem difficult to relate to a single wind cycle. We present results of underwater experiments and numerical simulations where a single wind regime can lead to two different dunes orientation depending on sediment availability. Sediment availability selects the overriding mechanism for the formation of dunes: increasing in height from the destabilization of a sand bed or elongating in a finger on a non-erodible ground from a localized sand source. These mechanisms drive the dunes orientation. Therefore, dunes alignment maximizes dunes orthogonality to sand fluxes in the bed instability mode, while dunes are aligned with the sand transport direction in the fingering mode. Then, we derive a model for dunes orientation, which explains the coexistence of bedforms with different alignments and quantitatively predicts the orientation of dunes in Earth deserts. Finally, we explore the phase diagram and the stability of the fingering mode.

  10. Heavy-ion irradiation on crystallographically oriented cordierite and the conversion of molecular CO2 to CO: a Raman spectroscopic study

    NASA Astrophysics Data System (ADS)

    Weikusat, Christian; Miletich, Ronald; Glasmacher, Ulrich A.; Trautmann, Christina; Neumann, Reinhard

    2010-07-01

    Crystallographically oriented sections of natural gemstone quality cordierite single-crystals have been irradiated with swift heavy ions of GeV energy and various fluences. Irradiation effects on the crystal lattice were investigated by means of Raman spectroscopy. Raman line scans along the trajectory of the ions reveal a close correlation of beam parameters (such as fluence and energy loss d E/d x along the ion path) to strain due to associated changes in lattice dimensions and defect concentration. The luminescence background also scales with the ion fluence and suggests the formation of point defects, which could also account for the macroscopically observable colouration of the irradiated samples. In addition, changes in the amount and nature of volatile species inside the structural channels are observed. They also scale with d E/d x and confirm the previously postulated irradiation-induced conversion of CO2 to CO. Irradiations along the crystallographic a-, b- and c-axis reveal no significant anisotropy effect with respect to lattice alterations. The polarisation characteristics of the Raman-active modes confirm the preferred molecular alignment of CO and CO2 along the a-axis direction.

  11. Pairwise Sequence Alignment Library

    2015-05-20

    Vector extensions, such as SSE, have been part of the x86 CPU since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprintmore » that features complex data dependencies. The trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. Therefore, a novel SIMD implementation of a parallel scan-based sequence alignment algorithm that can better exploit wider SIMD units was implemented as part of the Parallel Sequence Alignment Library (parasail). Parasail features: Reference implementations of all known vectorized sequence alignment approaches. Implementations of Smith Waterman (SW), semi-global (SG), and Needleman Wunsch (NW) sequence alignment algorithms. Implementations across all modern CPU instruction sets including AVX2 and KNC. Language interfaces for C/C++ and Python.« less

  12. Pairwise Sequence Alignment Library

    SciTech Connect

    Jeff Daily, PNNL

    2015-05-20

    Vector extensions, such as SSE, have been part of the x86 CPU since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprint that features complex data dependencies. The trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. Therefore, a novel SIMD implementation of a parallel scan-based sequence alignment algorithm that can better exploit wider SIMD units was implemented as part of the Parallel Sequence Alignment Library (parasail). Parasail features: Reference implementations of all known vectorized sequence alignment approaches. Implementations of Smith Waterman (SW), semi-global (SG), and Needleman Wunsch (NW) sequence alignment algorithms. Implementations across all modern CPU instruction sets including AVX2 and KNC. Language interfaces for C/C++ and Python.

  13. Alignments of galaxies within cosmic filaments from SDSS DR7

    SciTech Connect

    Zhang, Youcai; Yang, Xiaohu; Wang, Huiyuan; Wang, Lei; Mo, H. J.; Van den Bosch, Frank C. E-mail: xyang@sjtu.edu.cn

    2013-12-20

    Using a sample of galaxy groups selected from the Sloan Digital Sky Survey Data Release 7, we examine the alignment between the orientation of galaxies and their surrounding large-scale structure in the context of the cosmic web. The latter is quantified using the large-scale tidal field, reconstructed from the data using galaxy groups above a certain mass threshold. We find that the major axes of galaxies in filaments tend to be preferentially aligned with the directions of the filaments, while galaxies in sheets have their major axes preferentially aligned parallel to the plane of the sheets. The strength of this alignment signal is strongest for red, central galaxies, and in good agreement with that of dark matter halos in N-body simulations. This suggests that red, central galaxies are well aligned with their host halos, in quantitative agreement with previous studies based on the spatial distribution of satellite galaxies. There is a luminosity and mass dependence that brighter and more massive galaxies in filaments and sheets have stronger alignment signals. We also find that the orientation of galaxies is aligned with the eigenvector associated with the smallest eigenvalue of the tidal tensor. These observational results indicate that galaxy formation is affected by large-scale environments and strongly suggest that galaxies are aligned with each other over scales comparable to those of sheets and filaments in the cosmic web.

  14. Effects of the crystallographic orientation of Sn on the electromigration of Cu/Sn-Ag-Cu/Cu ball joints

    SciTech Connect

    Lee, Kiju; Kim, Keun-Soo; Tsukada, Yutaka; Suganuma, Katsuaki; Yamanaka, Kimihiro; Kuritani, Soichi; Ueshima, Minoru

    2011-11-17

    Electromigration behavior and fast circuit failure with respect to crystallographic orientation of Sn grains were examined. The test vehicle was Cu/Sn-3.0 wt% Ag-0.5 wt% Cu/Cu ball joints, and the applied current density was 15 kA/cm2 at 160 °C. The experimental results indicate that most of the solder bumps show different microstructural changes with respect to the crystallographic orientation of Sn grains. Fast failure of the bump occurred due to the dissolution of the Cu circuit on the cathode side caused by the fast interstitial diffusion of Cu atoms along the c-axis of the Sn grains when the c-axis was parallel to the electron flow. Slight microstructural changes were observed when the c-axis was perpendicular to the electron flow. In addition, Cu6Sn5 intermetallic compound (IMC) was formed along the direction of the c-axis of the Sn grains instead of the direction of electron flow in all solder ball joints.

  15. Thermally activated flux dissipation in [ital c]-axis-oriented YBa[sub 2]Cu[sub 3]O[sub 7]/PrBa[sub 2]Cu[sub 3]O[sub 7] multilayers

    SciTech Connect

    Qiu, X.G.; Zhao, B.R.; Guo, S.Q.; Zhang, J.R.; Li, L. ); Ichikawa, F.; Nishizaki, T.; Fukami, T.; Horie, Y.; Aomine, T. )

    1993-06-01

    We have systematically studied the resistive transition of multilayers of YBa[sub 2]Cu[sub 3]O[sub 7]/PrBa[sub 2]Cu[sub 3]O[sub 7] (YBCO/PBCO) under different perpendicular magnetic fields. It was found that the resistive transition is dominated by the flux-thermal-activation process; the broadening of the resistive transition was observed with the same order as that in single-layer thin films and the resistivity obeys the relation [rho]=[rho][sub 0] exp([minus][ital U]/[ital kT]). The activation energy depends logarithmically on the applied magnetic fields and decreased linearly with temperature. This phenomenon may be attributed to the creation of edge-dislocation pairs in the two-dimensional pancake vortices situated in the individual YBCO layer. The possible pinning mechanisms in the multilayers are discussed.

  16. DoSA: Database of Structural Alignments.

    PubMed

    Mahajan, Swapnil; Agarwal, Garima; Iftekhar, Mohammed; Offmann, Bernard; de Brevern, Alexandre G; Srinivasan, Narayanaswamy

    2013-01-01

    Protein structure alignment is a crucial step in protein structure-function analysis. Despite the advances in protein structure alignment algorithms, some of the local conformationally similar regions are mislabeled as structurally variable regions (SVRs). These regions are not well superimposed because of differences in their spatial orientations. The Database of Structural Alignments (DoSA) addresses this gap in identification of local structural similarities obscured in global protein structural alignments by realigning SVRs using an algorithm based on protein blocks. A set of protein blocks is a structural alphabet that abstracts protein structures into 16 unique local structural motifs. DoSA provides unique information about 159,780 conformationally similar and 56,140 conformationally dissimilar SVRs in 74 705 pairwise structural alignments of homologous proteins. The information provided on conformationally similar and dissimilar SVRs can be helpful to model loop regions. It is also conceivable that conformationally similar SVRs with conserved residues could potentially contribute toward functional integrity of homologues, and hence identifying such SVRs could be helpful in understanding the structural basis of protein function. Database URL: http://bo-protscience.fr/dosa/ PMID:23846594

  17. DoSA: Database of Structural Alignments

    PubMed Central

    Mahajan, Swapnil; Agarwal, Garima; Iftekhar, Mohammed; Offmann, Bernard; de Brevern, Alexandre G.; Srinivasan, Narayanaswamy

    2013-01-01

    Protein structure alignment is a crucial step in protein structure–function analysis. Despite the advances in protein structure alignment algorithms, some of the local conformationally similar regions are mislabeled as structurally variable regions (SVRs). These regions are not well superimposed because of differences in their spatial orientations. The Database of Structural Alignments (DoSA) addresses this gap in identification of local structural similarities obscured in global protein structural alignments by realigning SVRs using an algorithm based on protein blocks. A set of protein blocks is a structural alphabet that abstracts protein structures into 16 unique local structural motifs. DoSA provides unique information about 159 780 conformationally similar and 56 140 conformationally dissimilar SVRs in 74 705 pairwise structural alignments of homologous proteins. The information provided on conformationally similar and dissimilar SVRs can be helpful to model loop regions. It is also conceivable that conformationally similar SVRs with conserved residues could potentially contribute toward functional integrity of homologues, and hence identifying such SVRs could be helpful in understanding the structural basis of protein function. Database URL: http://bo-protscience.fr/dosa/ PMID:23846594

  18. Making Macroscopic Assemblies of Aligned Carbon Nanotubes

    NASA Technical Reports Server (NTRS)

    Smalley, Richard E.; Colbert, Daniel T.; Smith, Ken A.; Walters, Deron A.; Casavant, Michael J.; Qin, Xiaochuan; Yakobson, Boris; Hauge, Robert H.; Saini, Rajesh Kumar; Chiung, Wan-Ting; Huffman, Charles B.

    2005-01-01

    A method of aligning and assembling single-wall carbon nanotubes (SWNTs) to fabricate macroscopic structures has been invented. The method entails suspending SWNTs in a fluid, orienting the SWNTs by use of a magnetic and/or electric field, and then removing the aligned SWNTs from suspension in such a way as to assemble them while maintaining the alignment. SWNTs are essentially tubular extensions of fullerene molecules. It is desirable to assemble aligned SWNTs into macroscopic structures because the common alignment of the SWNTs in such a structure makes it possible to exploit, on a macroscopic scale, the unique mechanical, chemical, and electrical properties that individual oriented SWNTs exhibit at the molecular level. Because of their small size and high electrical conductivity, carbon nanotubes, and especially SWNTs, are useful for making electrical connectors in integrated circuits. Carbon nanotubes can be used as antennas at optical frequencies, and as probes in scanning tunneling microscopes, atomic-force microscopes, and the like. Carbon nanotubes can be used with or instead of carbon black in tires. Carbon nanotubes are useful as supports for catalysts. Ropes of SWNTs are metallic and, as such, are potentially useful in some applications in which electrical conductors are needed - for example, they could be used as additives in formulating electrically conductive paints. Finally, macroscopic assemblies of aligned SWNTs can serve as templates for the growth of more and larger structures of the same type. The great variety of tubular fullerene molecules and of the structures that could be formed by assembling them in various ways precludes a complete description of the present method within the limits of this article. It must suffice to present a typical example of the use of one of many possible variants of the method to form a membrane comprising SWNTs aligned substantially parallel to each other in the membrane plane. The apparatus used in this variant

  19. PDV Probe Alignment Technique

    SciTech Connect

    Whitworth, T L; May, C M; Strand, O T

    2007-10-26

    This alignment technique was developed while performing heterodyne velocimetry measurements at LLNL. There are a few minor items needed, such as a white card with aperture in center, visible alignment laser, IR back reflection meter, and a microscope to view the bridge surface. The work was performed on KCP flyers that were 6 and 8 mils wide. The probes used were Oz Optics manufactured with focal distances of 42mm and 26mm. Both probes provide a spot size of approximately 80?m at 1550nm. The 42mm probes were specified to provide an internal back reflection of -35 to -40dB, and the probe back reflections were measured to be -37dB and -33dB. The 26mm probes were specified as -30dB and both measured -30.5dB. The probe is initially aligned normal to the flyer/bridge surface. This provides a very high return signal, up to -2dB, due to the bridge reflectivity. A white card with a hole in the center as an aperture can be used to check the reflected beam position relative to the probe and launch beam, and the alignment laser spot centered on the bridge, see Figure 1 and Figure 2. The IR back reflection meter is used to measure the dB return from the probe and surface, and a white card or similar object is inserted between the probe and surface to block surface reflection. It may take several iterations between the visible alignment laser and the IR back reflection meter to complete this alignment procedure. Once aligned normal to the surface, the probe should be tilted to position the visible alignment beam as shown in Figure 3, and the flyer should be translated in the X and Y axis to reposition the alignment beam onto the flyer as shown in Figure 4. This tilting of the probe minimizes the amount of light from the bridge reflection into the fiber within the probe while maintaining the alignment as near normal to the flyer surface as possible. When the back reflection is measured after the tilt adjustment, the level should be about -3dB to -6dB higher than the probes

  20. Curriculum Alignment Research Suggests that Alignment Can Improve Student Achievement

    ERIC Educational Resources Information Center

    Squires, David

    2012-01-01

    Curriculum alignment research has developed showing the relationship among three alignment categories: the taught curriculum, the tested curriculum and the written curriculum. Each pair (for example, the taught and the written curriculum) shows a positive impact for aligning those results. Following this, alignment results from the Third…

  1. Orientation of FePt nanoparticles on top of a-SiO2/Si(001), MgO(001) and sapphire(0001): effect of thermal treatments and influence of substrate and particle size.

    PubMed

    Schilling, Martin; Ziemann, Paul; Zhang, Zaoli; Biskupek, Johannes; Kaiser, Ute; Wiedwald, Ulf

    2016-01-01

    Texture formation and epitaxy of thin metal films and oriented growth of nanoparticles (NPs) on single crystal supports are of general interest for improved physical and chemical properties especially of anisotropic materials. In the case of FePt, the main focus lies on its highly anisotropic magnetic behavior and its catalytic activity, both due to the chemically ordered face-centered tetragonal (fct) L10 phase. If the c-axis of the tetragonal system can be aligned normal to the substrate plane, perpendicular magnetic recording could be achieved. Here, we study the orientation of FePt NPs and films on a-SiO2/Si(001), i.e., Si(001) with an amorphous (a-) native oxide layer on top, on MgO(001), and on sapphire(0001) substrates. For the NPs of an approximately equiatomic composition, two different sizes were chosen: "small" NPs with diameters in the range of 2-3 nm and "large" ones in the range of 5-8 nm. The 3 nm thick FePt films, deposited by pulsed laser deposition (PLD), served as reference samples. The structural properties were probed in situ, particularly texture formation and epitaxy of the specimens by reflection high-energy electron diffraction (RHEED) and, in case of 3 nm nanoparticles, additionally by high-resolution transmission electron microscopy (HRTEM) after different annealing steps between 200 and 650 °C. The L10 phase is obtained at annealing temperatures above 550 °C for films and 600 °C for nanoparticles in accordance with previous reports. On the amorphous surface of a-SiO2/Si substrates we find no preferential orientation neither for FePt films nor nanoparticles even after annealing at 630 °C. On sapphire(0001) supports, however, FePt nanoparticles exhibit a clearly preferred (111) orientation even in the as-prepared state, which can be slightly improved by annealing at 600-650 °C. This improvement depends on the size of NPs: Only the smaller NPs approach a fully developed (111) orientation. On top of MgO(001) the effect of annealing on

  2. Magnetic Alignment of Block Copolymer Microdomains by Intrinsic Chain Anisotropy

    NASA Astrophysics Data System (ADS)

    Rokhlenko, Yekaterina; Gopinadhan, Manesh; Osuji, Chinedum O.; Zhang, Kai; O'Hern, Corey S.; Larson, Steven R.; Gopalan, Padma; Majewski, Paweł W.; Yager, Kevin G.

    2015-12-01

    We examine the role of intrinsic chain susceptibility anisotropy in magnetic field directed self-assembly of a block copolymer using in situ x-ray scattering. Alignment of a lamellar mesophase is observed on cooling across the disorder-order transition with the resulting orientational order inversely proportional to the cooling rate. We discuss the origin of the susceptibility anisotropy, Δ χ , that drives alignment and calculate its magnitude using coarse-grained molecular dynamics to sample conformations of surface-tethered chains, finding Δ χ ≈2 ×1 0-8. From field-dependent scattering data, we estimate that grains of ≈1.2 μ m are present during alignment. These results demonstrate that intrinsic anisotropy is sufficient to support strong field-induced mesophase alignment and suggest a versatile strategy for field control of orientational order in block copolymers.

  3. Magnetic alignment of block copolymer microdomains by intrinsic chain anisotropy

    DOE PAGESBeta

    Rokhlenko, Yekaterina; Yager, Kevin G.; Gopinadhan, Manesh; Osuji, Chinedum O.; Zhang, Kai; O'Hern, Corey S.; Larson, Steven R.; Gopalan, Padma; Majewski, Pawel W.

    2015-12-18

    We examine the role of intrinsic chain susceptibility anisotropy in magnetic field directed self-assembly of a block copolymer using in situ x-ray scattering. Alignment of a lamellar mesophase is observed on cooling across the disorder-order transition with the resulting orientational order inversely proportional to the cooling rate. We discuss the origin of the susceptibility anisotropy, Δχ, that drives alignment and calculate its magnitude using coarse-grained molecular dynamics to sample conformations of surface-tethered chains, finding Δχ ≈ 2×10–8. From field-dependent scattering data, we estimate that grains of ≈ 1.2 μm are present during alignment. Furthermore, these results demonstrate that intrinsic anisotropymore » is sufficient to support strong field-induced mesophase alignment and suggest a versatile strategy for field control of orientational order in block copolymers.« less

  4. Magnetic alignment of block copolymer microdomains by intrinsic chain anisotropy

    SciTech Connect

    Rokhlenko, Yekaterina; Yager, Kevin G.; Gopinadhan, Manesh; Osuji, Chinedum O.; Zhang, Kai; O'Hern, Corey S.; Larson, Steven R.; Gopalan, Padma; Majewski, Pawel W.

    2015-12-18

    We examine the role of intrinsic chain susceptibility anisotropy in magnetic field directed self-assembly of a block copolymer using in situ x-ray scattering. Alignment of a lamellar mesophase is observed on cooling across the disorder-order transition with the resulting orientational order inversely proportional to the cooling rate. We discuss the origin of the susceptibility anisotropy, Δχ, that drives alignment and calculate its magnitude using coarse-grained molecular dynamics to sample conformations of surface-tethered chains, finding Δχ ≈ 2×10–8. From field-dependent scattering data, we estimate that grains of ≈ 1.2 μm are present during alignment. Furthermore, these results demonstrate that intrinsic anisotropy is sufficient to support strong field-induced mesophase alignment and suggest a versatile strategy for field control of orientational order in block copolymers.

  5. The Influence of Sn Orientation on the Electromigration of Idealized Lead-free Interconnects

    NASA Astrophysics Data System (ADS)

    Linares, Xioranny

    As conventional lead solders are being replaced by Pb-free solders in electronic devices, the reliability of solder joints in integrated circuits (ICs) has become a high concern. Due to the miniaturization of ICs and consequently solder joints, the current density through the solder interconnects has increased causing electrical damage known as electromigration. Electromigration, atomic and mass migration due to high electron currents, is one of the most urgent reliability issues delaying the implementation of Pb-free solder materials in electronic devices. The research on Pb-free solders has mainly focused on the qualitative understanding of failure by electromigration. There has been little progress however, on the quantitative analysis of electromigration because of the lack of available material parameters, such as the effective charge, (z*), the driving force for electromigration. The research herein uses idealized interconnects to measure the z* of electromigration of Cu in Sn-3.0Ag-0.5Cu (SAC305) alloy under different experimental conditions. Planar SAC 305 interconnects were sandwiched between two Cu pads and subject to uniaxial current. The crystallographic orientation of Sn in these samples were characterized with electron backscatter diffraction (EBSD) and wavelength dispersive spectroscopy (WDS) before and after electromigration testing. Results indicate that samples with the c-axis aligned perpendicular to current flow, polycrystalline, and those with a diffusion barrier on the cathode side all inhibit the growth of intermetallic compounds (IMC). The effective charge values of Cu in SAC 305 under the different conditions tested were quantified for the first time and included in this dissertation. The following research is expected to help verify and improve the electromigration model and identify the desirable conditions to inhibit damage by electromigration in Pb-free solder joints.

  6. Thick c-axis textured (Tl,Pb)(Ba,Sr)2Ca2Cu3O9/Ag0.37 superconducting tapes by an ink spray pyrolysis method using a Tl-free precursor

    NASA Astrophysics Data System (ADS)

    Schulz, Douglas L.; Parilla, Philip A.; Ginley, David S.; Voigt, James A.; Roth, E. Peter

    1994-11-01

    In this letter we demonstrate a synthetic route to thick (5-20 μm) highly c-axis textured, nearly phase-pure superconducting (Tl,Pb)(Ba,Sr)2Ca2Cu3O9/Ag0.37 tapes. First, a Tl-free ink consisting of Pb0.5Ba0.4Sr1.6Ca2.0Cu3.0O9/Ag0.37 precursor powder in an ethanolic ethyl cellulose binder is sprayed onto a heated LaAlO3 substrate. After an intermediate oxygen anneal to remove the carbonaceous binder, a static 2-zone thallination anneal is performed to promote superconducting phase formation. Films exhibit excellent c-axis texturing as evidenced by x-ray diffraction θ/2θ and rocking curve characterization with morphological evidence for partial melting by scanning electron microscopy. Electrical characterization of these films give Tc onset values of 106-115 K with Tc zero reached by 99-101 K and transport Jc(77 K) up to 2.9×104 A/cm2. A mixed strong/weak-linked magnetic field dependence is observed for these films at 77 K and 0.4 T.

  7. Alignment of cD-galaxies with their surroundings

    NASA Technical Reports Server (NTRS)

    Vankampen, Eelco; Rhee, George

    1990-01-01

    For a sample of 122 rich Abell clusters the authors find a strong correlation of the position angle (orientation) of the first-ranked galaxy and its parent cluster. This alignment effect is strongest for cD-galaxies. Formation scenarios for cD galaxies, like the merging scenario, must produce such a strong alignment effect. The authors show some N-body simulations done for this purpose.

  8. Two-center minima in harmonic spectra from aligned polar molecules

    SciTech Connect

    Etches, Adam; Gaarde, Mette B.; Madsen, Lars Bojer

    2011-08-15

    We extend a model of two-center interference to include the superposition of opposite orientations in aligned polar molecules. We show that the position of the minimum in the harmonic spectrum from both aligned and oriented CO depends strongly on the relative recombination strength at different atoms, not just the relative phase. We reinterpret the minimum in aligned CO as an interference between opposite orientations, and obtain good agreement with numerical calculations. Inclusion of the first-order Stark effect shifts the position of the interference minimum in aligned CO even though aligned molecules do not posses total permanent dipoles. We explain the shift in terms of the phase that the electron of oriented CO accumulates due to the Stark effect.

  9. Biomimetic synthesis of oriented hydroxyapatite mediated by nonionic surfactants

    NASA Astrophysics Data System (ADS)

    Ye, Feng; Guo, Haifeng; Zhang, Haijiao

    2008-06-01

    Highly oriented organization of hydroxyapatite (HAP) nanorods was achieved through a simple reflux method using mixtures of triblock copolymer pluronic P123 and tween-60 as the mediated agents. Raft-like organized complexes were prepared when the nanorods were only directed by the mixed surfactants. Bundles of nanorod-like HAP crystals were obtained when urea was used as the cosurfactant. These HAP nanorods with a large amount of uniform 4 nm worm-like mesopores were arranged in parallel to each other along the c axis of HAP. The raft-like complexes might be mediated by the reverse lamellar micelles. And the added urea transformed the reverse lamellar micelles into hexagonal ones due to its association with the surfactant molecules by hydrogen bonds, resulting in the formation of bundles of nanorod-like HAP crystals. The regulation of the oriented HAP complexes in morphology extends the understanding of biomineralization and permits controllable design of biomimetic materials. In addition, the c-axis oriented raft-like HAP complex has great potential in selective bio-absorption and separation.

  10. Biomimetic synthesis of oriented hydroxyapatite mediated by nonionic surfactants.

    PubMed

    Ye, Feng; Guo, Haifeng; Zhang, Haijiao

    2008-06-18

    Highly oriented organization of hydroxyapatite (HAP) nanorods was achieved through a simple reflux method using mixtures of triblock copolymer pluronic P123 and tween-60 as the mediated agents. Raft-like organized complexes were prepared when the nanorods were only directed by the mixed surfactants. Bundles of nanorod-like HAP crystals were obtained when urea was used as the cosurfactant. These HAP nanorods with a large amount of uniform 4 nm worm-like mesopores were arranged in parallel to each other along the c axis of HAP. The raft-like complexes might be mediated by the reverse lamellar micelles. And the added urea transformed the reverse lamellar micelles into hexagonal ones due to its association with the surfactant molecules by hydrogen bonds, resulting in the formation of bundles of nanorod-like HAP crystals. The regulation of the oriented HAP complexes in morphology extends the understanding of biomineralization and permits controllable design of biomimetic materials. In addition, the c-axis oriented raft-like HAP complex has great potential in selective bio-absorption and separation. PMID:21825817

  11. Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity

    PubMed Central

    Sun, Meng; Bloom, Alexander B.; Zaman, Muhammad H.

    2015-01-01

    Metastatic cancers aggressively reorganize collagen in their microenvironment. For example, radially orientated collagen fibers have been observed surrounding tumor cell clusters in vivo. The degree of fiber alignment, as a consequence of this remodeling, has often been difficult to quantify. In this paper, we present an easy to implement algorithm for accurate detection of collagen fiber orientation in a rapid pixel-wise manner. This algorithm quantifies the alignment of both computer generated and actual collagen fiber networks of varying degrees of alignment within 5°°. We also present an alternative easy method to calculate the alignment index directly from the standard deviation of fiber orientation. Using this quantitative method for determining collagen alignment, we demonstrate that the number of collagen fiber intersections has a negative correlation with the degree of fiber alignment. This decrease in intersections of aligned fibers could explain why cells move more rapidly along aligned fibers than unaligned fibers, as previously reported. Overall, our paper provides an easier, more quantitative and quicker way to quantify fiber orientation and alignment, and presents a platform in studying effects of matrix and cellular properties on fiber alignment in complex 3D environments. PMID:26158674

  12. Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity.

    PubMed

    Sun, Meng; Bloom, Alexander B; Zaman, Muhammad H

    2015-01-01

    Metastatic cancers aggressively reorganize collagen in their microenvironment. For example, radially orientated collagen fibers have been observed surrounding tumor cell clusters in vivo. The degree of fiber alignment, as a consequence of this remodeling, has often been difficult to quantify. In this paper, we present an easy to implement algorithm for accurate detection of collagen fiber orientation in a rapid pixel-wise manner. This algorithm quantifies the alignment of both computer generated and actual collagen fiber networks of varying degrees of alignment within 5°°. We also present an alternative easy method to calculate the alignment index directly from the standard deviation of fiber orientation. Using this quantitative method for determining collagen alignment, we demonstrate that the number of collagen fiber intersections has a negative correlation with the degree of fiber alignment. This decrease in intersections of aligned fibers could explain why cells move more rapidly along aligned fibers than unaligned fibers, as previously reported. Overall, our paper provides an easier, more quantitative and quicker way to quantify fiber orientation and alignment, and presents a platform in studying effects of matrix and cellular properties on fiber alignment in complex 3D environments. PMID:26158674

  13. FMIT alignment cart

    SciTech Connect

    Potter, R.C.; Dauelsberg, L.B.; Clark, D.C.; Grieggs, R.J.

    1981-01-01

    The Fusion Materials Irradiation Test (FMIT) Facility alignment cart must perform several functions. It must serve as a fixture to receive the drift-tube girder assembly when it is removed from the linac tank. It must transport the girder assembly from the linac vault to the area where alignment or disassembly is to take place. It must serve as a disassembly fixture to hold the girder while individual drift tubes are removed for repair. It must align the drift tube bores in a straight line parallel to the girder, using an optical system. These functions must be performed without violating any clearances found within the building. The bore tubes of the drift tubes will be irradiated, and shielding will be included in the system for easier maintenance.

  14. Barrel alignment fixture

    NASA Astrophysics Data System (ADS)

    Sheeley, J. D.

    1981-04-01

    Fabrication of slapper type detonator cables requires bonding of a thin barrel over a bridge. Location of the barrel hole with respect to the bridge is critical: the barrel hole must be centered over the bridge uniform spacing on each side. An alignment fixture which permits rapid adjustment of the barrel position with respect to the bridge is described. The barrel is manipulated by pincer-type fingers which are mounted on a small x-y table equipped with micrometer adjustments. Barrel positioning, performed under a binocular microscopy, is rapid and accurate. After alignment, the microscope is moved out of position and an infrared (IR) heat source is aimed at the barrel. A 5-second pulse of infrared heat flows the adhesive under the barrel and bonds it to the cable. Sapphire and Fotoform glass barrels were bonded successfully with the alignment fixture.

  15. Improved docking alignment system

    NASA Technical Reports Server (NTRS)

    Monford, Leo G. (Inventor)

    1988-01-01

    Improved techniques are provided for the alignment of two objects. The present invention is particularly suited for 3-D translation and 3-D rotational alignment of objects in outer space. A camera is affixed to one object, such as a remote manipulator arm of the spacecraft, while the planar reflective surface is affixed to the other object, such as a grapple fixture. A monitor displays in real-time images from the camera such that the monitor displays both the reflected image of the camera and visible marking on the planar reflective surface when the objects are in proper alignment. The monitor may thus be viewed by the operator and the arm manipulated so that the reflective surface is perpendicular to the optical axis of the camera, the roll of the reflective surface is at a selected angle with respect to the camera, and the camera is spaced a pre-selected distance from the reflective surface.

  16. Optics Alignment Panel

    NASA Technical Reports Server (NTRS)

    Schroeder, Daniel J.

    1992-01-01

    The Optics Alignment Panel (OAP) was commissioned by the HST Science Working Group to determine the optimum alignment of the OTA optics. The goal was to find the position of the secondary mirror (SM) for which there is no coma or astigmatism in the camera images due to misaligned optics, either tilt or decenter. The despace position was reviewed of the SM and the optimum focus was sought. The results of these efforts are as follows: (1) the best estimate of the aligned position of the SM in the notation of HDOS is (DZ,DY,TZ,TY) = (+248 microns, +8 microns, +53 arcsec, -79 arcsec), and (2) the best focus, defined to be that despace which maximizes the fractional energy at 486 nm in a 0.1 arcsec radius of a stellar image, is 12.2 mm beyond paraxial focus. The data leading to these conclusions, and the estimated uncertainties in the final results, are presented.

  17. MUSE optical alignment procedure

    NASA Astrophysics Data System (ADS)

    Laurent, Florence; Renault, Edgard; Loupias, Magali; Kosmalski, Johan; Anwand, Heiko; Bacon, Roland; Boudon, Didier; Caillier, Patrick; Daguisé, Eric; Dubois, Jean-Pierre; Dupuy, Christophe; Kelz, Andreas; Lizon, Jean-Louis; Nicklas, Harald; Parès, Laurent; Remillieux, Alban; Seifert, Walter; Valentin, Hervé; Xu, Wenli

    2012-09-01

    MUSE (Multi Unit Spectroscopic Explorer) is a second generation VLT integral field spectrograph (1x1arcmin² Field of View) developed for the European Southern Observatory (ESO), operating in the visible wavelength range (0.465-0.93 μm). A consortium of seven institutes is currently assembling and testing MUSE in the Integration Hall of the Observatoire de Lyon for the Preliminary Acceptance in Europe, scheduled for 2013. MUSE is composed of several subsystems which are under the responsibility of each institute. The Fore Optics derotates and anamorphoses the image at the focal plane. A Splitting and Relay Optics feed the 24 identical Integral Field Units (IFU), that are mounted within a large monolithic instrument mechanical structure. Each IFU incorporates an image slicer, a fully refractive spectrograph with VPH-grating and a detector system connected to a global vacuum and cryogenic system. During 2011, all MUSE subsystems were integrated, aligned and tested independently in each institute. After validations, the systems were shipped to the P.I. institute at Lyon and were assembled in the Integration Hall This paper describes the end-to-end optical alignment procedure of the MUSE instrument. The design strategy, mixing an optical alignment by manufacturing (plug and play approach) and few adjustments on key components, is presented. We depict the alignment method for identifying the optical axis using several references located in pupil and image planes. All tools required to perform the global alignment between each subsystem are described. The success of this alignment approach is demonstrated by the good results for the MUSE image quality. MUSE commissioning at the VLT (Very Large Telescope) is planned for 2013.

  18. Understanding and overcoming shear alignment of fibers during extrusion.

    PubMed

    Martin, Joshua J; Riederer, Michael S; Krebs, Melissa D; Erb, Randall M

    2015-01-14

    Fiber alignment is the defining architectural characteristic of discontinuous fiber composites and is dictated by shear-dominated processing techniques including flow-injection molding, tape-casting, and mold-casting. However, recent colloidal assembly techniques have started to employ additional forces in fiber suspensions that have the potential to change the energy landscape of the shear-dominated alignment in conditions of flow. In this paper, we develop an energetics model to characterize the shear-alignment of rigid fibers under different flow conditions in the presence of magnetic colloidal alignment forces. We find that these colloidal forces can be sufficient to manipulate the energetic landscape and obtain tunable fiber alignment during flow within even small geometries, such as capillary flow. In most conditions, these colloidal forces work to freeze the fiber orientation during flow and prevent the structure disrupting phenomenon of Jeffrey's orbits that has been accepted to rule fiber suspensions under simple shear flow. PMID:25408494

  19. Alignment of atmospheric mineral dust due to electric field

    NASA Astrophysics Data System (ADS)

    Ulanowski, Z.; Bailey, J.; Lucas, P. W.; Hough, J. H.; Hirst, E.

    2007-12-01

    Optical polarimetry observations on La Palma, Canary Islands, during a Saharan dust episode show dichroic extinction indicating the presence of vertically aligned particles in the atmosphere. Modelling of the extinction together with particle orientation indicates that the alignment could have been due to an electric field of the order of 2 kV/m. Two alternative mechanisms for the origin of the field are examined: the effect of reduced atmospheric conductivity and charging of the dust layer, the latter effect being a more likely candidate. It is concluded that partial alignment may be a common feature of Saharan dust layers. The modelling indicates that the alignment can significantly alter dust optical depth. This "Venetian blind effect" may have decreased optical thickness in the vertical direction by as much as 10% for the case reported here. It is also possible that the alignment and the electric field modify dust transport.

  20. Controlling laser emission by selecting crystal orientation

    NASA Astrophysics Data System (ADS)

    Chen, Lijuan; Han, Shujuan; Wang, Zhengping; Wang, Jiyang; Zhang, Huanjin; Yu, Haohai; Han, Shuo; Xu, Xinguang

    2013-01-01

    Based on the anisotropy of laser crystal, we demonstrate a method of adjusting laser emission by selecting crystal orientation. When the light propagating direction varies from a to c axis of Nd:LiGd(MoO4)2 crystal, emission wavelength exhibits a sensitive change of 1061 nm → 1061/1062 + 1068 nm → 1068 nm. The experimental discipline is well explained by a theoretical study of simulating on the spatial distribution of stimulated emission cross-section. This letter manifests that the laser property along non-principal-axis direction is also valuable for research and application, which breaks through the traditional custom of using laser materials processed along principal-axis.

  1. Cooperative liquid-crystal alignment generated by overlaid topography

    NASA Astrophysics Data System (ADS)

    Yi, Youngwoo; Maclennan, Joseph E.; Clark, Noel A.

    2011-05-01

    Nematic and smectic liquid crystals were introduced into μm-scale gaps between plates coated with polymer films nanoimprinted with parallel arrays of rectangular channels. Overlaying the channels on the two plates close enough at a slight angle produces a mosaic of alternating planar and homeotropic alignments and hybrid alignment, showing that complex liquid-crystal orientation patterns can be achieved by combining two simple topographic patterns. These alignment patterns are attributed to spatial variation of surface roughness and 3D topographic structure created by a sufficient proximity of the two patterns.

  2. Cooperative liquid-crystal alignment generated by overlaid topography.

    PubMed

    Yi, Youngwoo; Maclennan, Joseph E; Clark, Noel A

    2011-05-01

    Nematic and smectic liquid crystals were introduced into μm-scale gaps between plates coated with polymer films nanoimprinted with parallel arrays of rectangular channels. Overlaying the channels on the two plates close enough at a slight angle produces a mosaic of alternating planar and homeotropic alignments and hybrid alignment, showing that complex liquid-crystal orientation patterns can be achieved by combining two simple topographic patterns. These alignment patterns are attributed to spatial variation of surface roughness and 3D topographic structure created by a sufficient proximity of the two patterns. PMID:21728557

  3. Alignments of the Dominant Galaxies in Poor Clusters

    NASA Astrophysics Data System (ADS)

    Fuller, Todd M.; West, Michael J.; Bridges, Terry J.

    1999-07-01

    We have examined the orientations of brightest cluster galaxies (BCGs) in poor MKW (Morgan, Kayser, and White) and AWM (Albert, White, and Morgan) clusters and find that, like their counterparts in richer Abell clusters, poor cluster BCGs exhibit a strong propensity to be aligned with the principal axes of their host clusters as well as the surrounding distribution of nearby (<=20 h-1 Mpc) Abell clusters. The processes responsible for dominant galaxy alignments are therefore independent of cluster richness. We argue that these alignments most likely arise from anisotropic infall of material into clusters along large-scale filaments.

  4. Nanodrawing of Aligned Single Carbon Nanotubes with a Nanopen.

    PubMed

    Yeshua, Talia; Lehmann, Christian; Hübner, Uwe; Azoubel, Suzanna; Magdassi, Shlomo; Campbell, Eleanor E B; Reich, Stephanie; Lewis, Aaron

    2016-03-01

    Single-walled carbon nanotubes (SWCNTs) are considered pivotal components for molecular electronics. Techniques for SWCNT lithography today lack simplicity, flexibility, and speed of direct, oriented deposition at specific target locations. In this paper SWCNTs are directly drawn and placed with chemical identification and demonstrated orientation using fountain pen nanolithography (FPN) under ambient conditions. Placement across specific electrical contacts with such alignment is demonstrated and characterized. The fundamental basis of the drawing process with alignment has potential applications for other related systems such as inorganic nanotubes, polymers, and biological molecules. PMID:26789406

  5. Alignment-Induced Epitaxial Transition in Organic-Organic Heteroepitaxy

    SciTech Connect

    Guo Dong; Sakamoto, Kenji; Miki, Kazushi; Ikeda, Susumu; Saiki, Koichiro

    2008-12-05

    We report the epitaxial growth of thin films of a small organic molecule (pentacene) on polymer substrates with controllable photoalignment over a wide range. The pentacene molecular plane exhibited a distinct orientational change from parallel to perpendicular relative to the polymer chain with increasing substrate polymer alignment. Each orientation consists of twinlike domains. Such characteristics reveal a unique alignment-induced epitaxial transition controlled by the subtle balance of weak interactions, showing a promising approach for tuning the characteristics of organic semiconductor based electronic devices.

  6. Alignment of gold nanorods by angular photothermal depletion

    SciTech Connect

    Taylor, Adam B.; Chow, Timothy T. Y.; Chon, James W. M.

    2014-02-24

    In this paper, we demonstrate that a high degree of alignment can be imposed upon randomly oriented gold nanorod films by angular photothermal depletion with linearly polarized laser irradiation. The photothermal reshaping of gold nanorods is observed to follow quadratic melting model rather than the threshold melting model, which distorts the angular and spectral hole created on 2D distribution map of nanorods to be an open crater shape. We have accounted these observations to the alignment procedures and demonstrated good agreement between experiment and simulations. The use of multiple laser depletion wavelengths allowed alignment criteria over a large range of aspect ratios, achieving 80% of the rods in the target angular range. We extend the technique to demonstrate post-alignment in a multilayer of randomly oriented gold nanorod films, with arbitrary control of alignment shown across the layers. Photothermal angular depletion alignment of gold nanorods is a simple, promising post-alignment method for creating future 3D or multilayer plasmonic nanorod based devices and structures.

  7. Whose Orientations?

    ERIC Educational Resources Information Center

    Gutoff, Joshua

    2010-01-01

    This article presents the author's response to Jon A. Levisohn's article entitled "A Menu of Orientations in the Teaching of Rabbinic Literature." While the "menu" Levisohn describes in his groundbreaking work on orientations to the teaching of rabbinic texts will almost certainly be refined over time, even as it stands this article should be of…

  8. Orienteering injuries

    PubMed Central

    Folan, Jean M.

    1982-01-01

    At the Irish National Orienteering Championships in 1981 a survey of the injuries occurring over the two days of competition was carried out. Of 285 individual competitors there was a percentage injury rate of 5.26%. The article discusses the injuries and aspects of safety in orienteering. Imagesp236-ap237-ap237-bp238-ap239-ap240-a PMID:7159815

  9. Nonlinear optical studies of liquid crystal alignment on a rubbed polyvinyl alcohol surface

    NASA Astrophysics Data System (ADS)

    Wei, Xing; Hong, Seok-Cheol; Zhuang, Xiaowei; Goto, Tomohisa; Shen, Y. R.

    2000-10-01

    Sum-frequency vibrational spectroscopy and second-harmonic generation have been used to measure the orientational distributions of the polymer chains and adsorbed 8CB liquid crystal molecules on a rubbed polyvinyl alcohol surface. Results show that the polymer chains at the surface appear to be well aligned by rubbing, and the adsorbed liquid crystal molecules are aligned, in turn, by the surface polymer chains. Strong correlation exists between the orientational distributions of the polymer chains and the liquid crystal molecules, indicating that the surface-induced bulk alignment of a liquid crystal film by rubbed polymer surfaces is via an orientational epitaxylike mechanism.

  10. Vertical Alignment and Collaboration.

    ERIC Educational Resources Information Center

    Bergman, Donna; Calzada, Lucio; LaPointe, Nancy; Lee, Audra; Sullivan, Lynn

    This study investigated whether vertical (grade level sequence) alignment of the curriculum in conjunction with teacher collaboration would enhance student performance on the Texas Assessment of Academic Skills (TAAS) test in south Texas school districts of various sizes. Surveys were mailed to the office of the superintendent of 47 school…

  11. Curriculum Alignment: Establishing Coherence

    ERIC Educational Resources Information Center

    Gagné, Philippe; Dumont, Laurence; Brunet, Sabine; Boucher, Geneviève

    2013-01-01

    In this paper, we present a step-by-step guide to implement a curricular alignment project, directed at professional development and student support, and developed in a higher education French as a second language department. We outline best practices and preliminary results from our experience and provide ways to adapt our experience to other…

  12. Aligning brains and minds

    PubMed Central

    Tong, Frank

    2012-01-01

    In this issue of Neuron, Haxby and colleagues describe a new method for aligning functional brain activity patterns across participants. Their study demonstrates that objects are similarly represented across different brains, allowing for reliable classification of one person’s brain activity based on another’s. PMID:22017984

  13. Aligned-or Not?

    ERIC Educational Resources Information Center

    Roseman, Jo Ellen; Koppal, Mary

    2015-01-01

    When state leaders and national partners in the development of the Next Generation Science Standards met to consider implementation strategies, states and school districts wanted to know which materials were aligned to the new standards. The answer from the developers was short but not sweet: You won't find much now, and it's going to…

  14. Optically Aligned Drill Press

    NASA Technical Reports Server (NTRS)

    Adderholdt, Bruce M.

    1994-01-01

    Precise drill press equipped with rotary-indexing microscope. Microscope and drill exchange places when turret rotated. Microscope axis first aligned over future hole, then rotated out of way so drill axis assumes its precise position. New procedure takes less time to locate drilling positions and produces more accurate results. Apparatus adapted to such other machine tools as milling and measuring machines.

  15. Bokeh mirror alignment for Cherenkov telescopes

    NASA Astrophysics Data System (ADS)

    Ahnen, M. L.; Baack, D.; Balbo, M.; Bergmann, M.; Biland, A.; Blank, M.; Bretz, T.; Bruegge, K. A.; Buss, J.; Domke, M.; Dorner, D.; Einecke, S.; Hempfling, C.; Hildebrand, D.; Hughes, G.; Lustermann, W.; Mannheim, K.; Mueller, S. A.; Neise, D.; Neronov, A.; Noethe, M.; Overkemping, A.-K.; Paravac, A.; Pauss, F.; Rhode, W.; Shukla, A.; Temme, F.; Thaele, J.; Toscano, S.; Vogler, P.; Walter, R.; Wilbert, A.

    2016-09-01

    Imaging Atmospheric Cherenkov Telescopes (IACTs) need imaging optics with large apertures and high image intensities to map the faint Cherenkov light emitted from cosmic ray air showers onto their image sensors. Segmented reflectors fulfill these needs, and composed from mass production mirror facets they are inexpensive and lightweight. However, as the overall image is a superposition of the individual facet images, alignment remains a challenge. Here we present a simple, yet extendable method, to align a segmented reflector using its Bokeh. Bokeh alig nment does not need a star or good weather nights but can be done even during daytime. Bokeh alignment optimizes the facet orientations by comparing the segmented reflectors Bokeh to a predefined template. The optimal Bokeh template is highly constricted by the reflector's aperture and is easy accessible. The Bokeh is observed using the out of focus image of a near by point like light source in a distance of about 10 focal lengths. We introduce Bokeh alignment on segmented reflectors and demonstrate it on the First Geiger-mode Avalanche Cherenkov Telescope (FACT) on La Palma, Spain.

  16. Director orientation of nematic liquid crystal using orientated nanofibers obtained by electrospinning

    NASA Astrophysics Data System (ADS)

    Toan, Duong Quoc; Ozaki, Ryotaro; Moritake, Hiroshi

    2014-01-01

    Nanofibers with diameters less than 1000 nm assembled by electrospinning and with a large surface area per unit mass have been attracting considerable attention and are expected to affect the orientation of liquid crystals (LCs). Firstly, to determine the orientated nanofibers on an indium-tin-oxide (ITO) glass surface, the spectral analysis technique of using fast Fourier transform is applied. Optical observation is performed to confirm the orientation of LC molecules in a twisted nematic LC cell. Finally, optical measurement of an LC cell is carried out to estimate the threshold voltage of the LC in two types of twisted nematic LC cell: one with rubbed polyimide and the other with orientated nanofibers as the alignment layer. A twisted nematic LC is oriented in the cell using orientated nanofibers as the alignment layer and the threshold voltage of this cell agrees with that of the conventional polyimide rubbed cell.

  17. Nanofiber alignment of a small diameter elastic electrospun scaffold

    NASA Astrophysics Data System (ADS)

    Patel, Jignesh

    Cardiovascular disease is the leading cause of death in western countries with coronary heart disease making up 50% of these deaths. As a treatment option, tissue engineered grafts have great potential. Elastic scaffolds that mimic arterial extracellular matrix (ECM) may hold the key to creating viable vascular grafts. Electrospinning is a widely used scaffold fabrication technique to engineer tubular scaffolds. In this study, we investigated how the collector rotation speed altered the nanofiber alignment which may improve mechanical characteristics making the scaffold more suitable for arterial grafts. The scaffold was fabricated from a blend of PCL/Elastin. 2D Fast Fourier Transform (FFT) image processing tool and MatLab were used to quantitatively analyze nanofiber orientation at different collector speeds (13500 to 15500 rpm). Both Image J and MatLab showed graphical peaks indicating predominant fiber orientation angles. A collector speed of 15000 rpm was found to produce the best nanofiber alignment with narrow peaks at 90 and 270 degrees, and a relative amplitude of 200. This indicates a narrow distribution of circumferentially aligned nanofibers. Collector speeds below and above 15000 rpm caused a decrease in fiber alignment with a broader orientation distribution. Uniformity of fiber diameter was also measured. Of 600 measures from the 15000 rpm scaffolds, the fiber diameter range from 500 nm to 899 nm was most prevalent. This diameter range was slightly larger than native ECM which ranges from 50 nm to 500 nm. The second most prevalent diameter range had an average of 404 nm which is within the diameter range of collagen. This study concluded that with proper electrospinning technique and collector speed, it is possible to fabricate highly aligned small diameter elastic scaffolds. Image J 2D FFT results confirmed MatLab findings for the analyses of circumferentially aligned nanofibers. In addition, MatLab analyses simplified the FFT orientation data

  18. Internal Alignment of the SLD Vertex Detector

    SciTech Connect

    Jackson, D.J.; Wickens, F.J.; Su, D.; /SLAC

    2007-12-03

    The tracking resolution and vertex finding capabilities of the SLD experiment depended upon a precise knowledge of the location and orientation of the elements of the SLD pixel vertex detector (VXD3) in 3D space. At the heart of the procedure described here to align the 96 CCDs is the matrix inversion technique of singular value decomposition (SVD). This tool was employed to unfold the detector geometry corrections from the track data in the VXD3. The algorithm was adapted to perform an optimal {chi}{sup 2} minimization by careful treatment of the track hit residual measurement errors. The tracking resolution obtained with the aligned geometry achieved the design performance. Comments are given on how this method could be used for other trackers.

  19. Electric-Field-Induced Alignment of Block Copolymer/Nanoparticle Blends

    SciTech Connect

    Liedel, Clemens; Schindler, Kerstin; Pavan, Mariela J.; Lewin, Christian; Pester, Christian W; Ruppel, Markus A; Urban, Volker S; Shenhar, Roy; Boker, Alexander

    2013-01-01

    External electric fi elds readily align birefringent block-copolymer mesophases. In this study the effect of gold nanoparticles on the electric-fi eld-induced alignment of a lamellae-forming polystyrene- block -poly(2-vinylpyridine) copolymer is assessed. Nanoparticles are homogeneously dispersed in the styrenic phase and promote the quantitative alignment of lamellar domains by substantially lowering the critical field strength above which alignment proceeds. The results suggest that the electric-fi eldassisted alignment of nanostructured block copolymer/nanoparticle composites may offer a simple way to greatly mitigate structural and orientational defects of such fi lms under benign experimental conditions.

  20. MUSE alignment onto VLT

    NASA Astrophysics Data System (ADS)

    Laurent, Florence; Renault, Edgard; Boudon, Didier; Caillier, Patrick; Daguisé, Eric; Dupuy, Christophe; Jarno, Aurélien; Lizon, Jean-Louis; Migniau, Jean-Emmanuel; Nicklas, Harald; Piqueras, Laure

    2014-07-01

    MUSE (Multi Unit Spectroscopic Explorer) is a second generation Very Large Telescope (VLT) integral field spectrograph developed for the European Southern Observatory (ESO). It combines a 1' x 1' field of view sampled at 0.2 arcsec for its Wide Field Mode (WFM) and a 7.5"x7.5" field of view for its Narrow Field Mode (NFM). Both modes will operate with the improved spatial resolution provided by GALACSI (Ground Atmospheric Layer Adaptive Optics for Spectroscopic Imaging), that will use the VLT deformable secondary mirror and 4 Laser Guide Stars (LGS) foreseen in 2015. MUSE operates in the visible wavelength range (0.465-0.93 μm). A consortium of seven institutes is currently commissioning MUSE in the Very Large Telescope for the Preliminary Acceptance in Chile, scheduled for September, 2014. MUSE is composed of several subsystems which are under the responsibility of each institute. The Fore Optics derotates and anamorphoses the image at the focal plane. A Splitting and Relay Optics feed the 24 identical Integral Field Units (IFU), that are mounted within a large monolithic structure. Each IFU incorporates an image slicer, a fully refractive spectrograph with VPH-grating and a detector system connected to a global vacuum and cryogenic system. During 2012 and 2013, all MUSE subsystems were integrated, aligned and tested to the P.I. institute at Lyon. After successful PAE in September 2013, MUSE instrument was shipped to the Very Large Telescope in Chile where that was aligned and tested in ESO integration hall at Paranal. After, MUSE was directly transported, fully aligned and without any optomechanical dismounting, onto VLT telescope where the first light was overcame the 7th of February, 2014. This paper describes the alignment procedure of the whole MUSE instrument with respect to the Very Large Telescope (VLT). It describes how 6 tons could be move with accuracy better than 0.025mm and less than 0.25 arcmin in order to reach alignment requirements. The success

  1. Blocks and residual stresses in sapphire rods of different crystallographic orientations grown by the Stepanov method

    SciTech Connect

    Krymov, V. M. Nosov, Yu. G.; Bakholdin, S. I.; Maslov, V. N.; Shul’pina, I. L.

    2015-05-15

    The formation of blocks in shaped sapphire rods of two crystallographic orientations has been investigated. It is shown that, when growth occurs in the direction of the optical c axis, blocks are formed with a higher probability than in the case of growth in the a direction. A model of formation of blocks in rods of different orientations is proposed. The distribution of residual stresses over sapphire rod cross sections is measured by conoscopy. It is found that stresses increase from the middle of a rod to its periphery and reach 20 MPa.

  2. Connectivity independent protein-structure alignment: a hierarchical approach

    PubMed Central

    Kolbeck, Bjoern; May, Patrick; Schmidt-Goenner, Tobias; Steinke, Thomas; Knapp, Ernst-Walter

    2006-01-01

    Background Protein-structure alignment is a fundamental tool to study protein function, evolution and model building. In the last decade several methods for structure alignment were introduced, but most of them ignore that structurally similar proteins can share the same spatial arrangement of secondary structure elements (SSE) but differ in the underlying polypeptide chain connectivity (non-sequential SSE connectivity). Results We perform protein-structure alignment using a two-level hierarchical approach implemented in the program GANGSTA. On the first level, pair contacts and relative orientations between SSEs (i.e. α-helices and β-strands) are maximized with a genetic algorithm (GA). On the second level residue pair contacts from the best SSE alignments are optimized. We have tested the method on visually optimized structure alignments of protein pairs (pairwise mode) and for database scans. For a given protein structure, our method is able to detect significant structural similarity of functionally important folds with non-sequential SSE connectivity. The performance for structure alignments with strictly sequential SSE connectivity is comparable to that of other structure alignment methods. Conclusion As demonstrated for several applications, GANGSTA finds meaningful protein-structure alignments independent of the SSE connectivity. GANGSTA is able to detect structural similarity of protein folds that are assigned to different superfamilies but nevertheless possess similar structures and perform related functions, even if these proteins differ in SSE connectivity. PMID:17118190

  3. Effect of crystal orientation on conductivity and electron mobility in single-crystal alumina

    NASA Technical Reports Server (NTRS)

    Will, Fritz G.; Delorenzi, Horst G.; Janora, Kevin H.

    1992-01-01

    The electrical conductivity of high-purity, single-crystal alumina is determined parallel to and perpendicular to the c-axis. The mean conductivity of four samples of each orientation is a factor 3.3 higher parallel to the c-axis than perpendicular to it. The conductivity as a function of temperature is attributed to extrinsic electron conduction at temperatures from 400 to 900 C, and intrinsic semiconduction at temperatures from 900 to 1300 C. In the high-temperature regime, the slope on all eight specimens is 4.7 +/- 0.1 eV. Hence, the thermal bandgap at O K is 9.4 +/- 0.2 eV.

  4. Inflation by alignment

    SciTech Connect

    Burgess, C.P.; Roest, Diederik

    2015-06-08

    Pseudo-Goldstone bosons (pGBs) can provide technically natural inflatons, as has been comparatively well-explored in the simplest axion examples. Although inflationary success requires trans-Planckian decay constants, f≳M{sub p}, several mechanisms have been proposed to obtain this, relying on (mis-)alignments between potential and kinetic energies in multiple-field models. We extend these mechanisms to a broader class of inflationary models, including in particular the exponential potentials that arise for pGB potentials based on noncompact groups (and so which might apply to moduli in an extra-dimensional setting). The resulting potentials provide natural large-field inflationary models and can predict a larger primordial tensor signal than is true for simpler single-field versions of these models. In so doing we provide a unified treatment of several alignment mechanisms, showing how each emerges as a limit of the more general setup.

  5. Alignments of RNA structures.

    PubMed

    Blin, Guillaume; Denise, Alain; Dulucq, Serge; Herrbach, Claire; Touzet, Hélène

    2010-01-01

    We describe a theoretical unifying framework to express the comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supersequences for arc-annotated sequences and encompasses the main existing models for RNA structure comparison based on trees and arc-annotated sequences with a variety of edit operations. It also gives rise to edit models that have not been studied yet. We provide a thorough analysis of the alignment hierarchy, including a new polynomial-time algorithm and an NP-completeness proof. The polynomial-time algorithm involves biologically relevant edit operations such as pairing or unpairing nucleotides. It has been implemented in a software, called gardenia, which is available at the Web server http://bioinfo.lifl.fr/RNA/gardenia. PMID:20431150

  6. On the alignment space.

    PubMed

    Shen, Shi-Yi; Wang, Kui; Hu, Gang; Chen, Lu-Sheng; Zhang, Hua; Xia, Shu-Tao

    2005-01-01

    Sequences with generalized errors which are called mutations in bioinformatics and generalized error-correcting codes are studied in this paper. In the areas of bioinformatics, computer science and information theory, sequences with generalized errors are discussed respectively for different aims. Firstly, we give the definitions of alignment distance and Levenshtein distance by expansion sequences and discuss their properties and relations. Then the modular structure theory is introduced for strictly describe the expansion sequences. We show that the expansion modular structures of sequences form a Boolean algebra. As applications of the modular structure theory, we give a new and more strict proof of triangle inequality for alignment distance. At last, the definition and construction of generalized error-correcting codes are studied, and some optimal codes with small length are listed. PMID:17282158

  7. Alignment reference device

    DOEpatents

    Patton, Gail Y.; Torgerson, Darrel D.

    1987-01-01

    An alignment reference device provides a collimated laser beam that minimizes angular deviations therein. A laser beam source outputs the beam into a single mode optical fiber. The output end of the optical fiber acts as a source of radiant energy and is positioned at the focal point of a lens system where the focal point is positioned within the lens. The output beam reflects off a mirror back to the lens that produces a collimated beam.

  8. Nuclear reactor alignment plate configuration

    DOEpatents

    Altman, David A; Forsyth, David R; Smith, Richard E; Singleton, Norman R

    2014-01-28

    An alignment plate that is attached to a core barrel of a pressurized water reactor and fits within slots within a top plate of a lower core shroud and upper core plate to maintain lateral alignment of the reactor internals. The alignment plate is connected to the core barrel through two vertically-spaced dowel pins that extend from the outside surface of the core barrel through a reinforcement pad and into corresponding holes in the alignment plate. Additionally, threaded fasteners are inserted around the perimeter of the reinforcement pad and into the alignment plate to further secure the alignment plate to the core barrel. A fillet weld also is deposited around the perimeter of the reinforcement pad. To accomodate thermal growth between the alignment plate and the core barrel, a gap is left above, below and at both sides of one of the dowel pins in the alignment plate holes through with the dowel pins pass.

  9. Analyzing Orientations

    NASA Astrophysics Data System (ADS)

    Ruggles, Clive L. N.

    Archaeoastronomical field survey typically involves the measurement of structural orientations (i.e., orientations along and between built structures) in relation to the visible landscape and particularly the surrounding horizon. This chapter focuses on the process of analyzing the astronomical potential of oriented structures, whether in the field or as a desktop appraisal, with the aim of establishing the archaeoastronomical "facts". It does not address questions of data selection (see instead Chap. 25, "Best Practice for Evaluating the Astronomical Significance of Archaeological Sites", 10.1007/978-1-4614-6141-8_25) or interpretation (see Chap. 24, "Nature and Analysis of Material Evidence Relevant to Archaeoastronomy", 10.1007/978-1-4614-6141-8_22). The main necessity is to determine the azimuth, horizon altitude, and declination in the direction "indicated" by any structural orientation. Normally, there are a range of possibilities, reflecting the various errors and uncertainties in estimating the intended (or, at least, the constructed) orientation, and in more formal approaches an attempt is made to assign a probability distribution extending over a spread of declinations. These probability distributions can then be cumulated in order to visualize and analyze the combined data from several orientations, so as to identify any consistent astronomical associations that can then be correlated with the declinations of particular astronomical objects or phenomena at any era in the past. The whole process raises various procedural and methodological issues and does not proceed in isolation from the consideration of corroborative data, which is essential in order to develop viable cultural interpretations.

  10. Dynamic Alignment at SLS

    SciTech Connect

    Ruland, Robert E.

    2003-04-23

    The relative alignment of components in the storage ring of the Swiss Light Source (SLS) is guaranteed by mechanical means. The magnets are rigidly fixed to 48 girders by means of alignment rails with tolerances of less than {+-}15 {micro}m. The bending magnets, supported by 3 point ball bearings, overlap adjacent girders and thus establish virtual train links between the girders, located near the bending magnet centres. Keeping the distortion of the storage ring geometry within a tolerance of {+-}100 {micro}m in order to guarantee sufficient dynamic apertures, requires continuous monitoring and correction of the girder locations. Two monitoring systems for the horizontal and the vertical direction will be installed to measure displacements of the train link between girders, which are due to ground settings and temperature effects: The hydrostatic levelling system (HLS) gives an absolute vertical reference, while the horizontal positioning system (HPS), which employs low cost linear encoders with sub-micron resolution, measures relative horizontal movements. The girder mover system based on five DC motors per girder allows a dynamic realignment of the storage ring within a working window of more than {+-}1 mm for girder translations and {+-}1 mrad for rotations. We will describe both monitoring systems (HLS and HPS) as well as the applied correction scheme based on the girder movers. We also show simulations indicating that beam based girder alignment takes care of most of the static closed orbit correction.

  11. Docking alignment system

    NASA Technical Reports Server (NTRS)

    Monford, Leo G. (Inventor)

    1990-01-01

    Improved techniques are provided for alignment of two objects. The present invention is particularly suited for three-dimensional translation and three-dimensional rotational alignment of objects in outer space. A camera 18 is fixedly mounted to one object, such as a remote manipulator arm 10 of the spacecraft, while the planar reflective surface 30 is fixed to the other object, such as a grapple fixture 20. A monitor 50 displays in real-time images from the camera, such that the monitor displays both the reflected image of the camera and visible markings on the planar reflective surface when the objects are in proper alignment. The monitor may thus be viewed by the operator and the arm 10 manipulated so that the reflective surface is perpendicular to the optical axis of the camera, the roll of the reflective surface is at a selected angle with respect to the camera, and the camera is spaced a pre-selected distance from the reflective surface.

  12. Polar cap arcs: Sun-aligned or cusp-aligned?

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Paxton, L. J.; Zhang, Qinghe; Xing, Zanyang

    2016-08-01

    Polar cap arcs are often called sun-aligned arcs. Satellite observations reveal that polar cap arcs join together at the cusp and are actually cusp aligned. Strong ionospheric plasma velocity shears, thus field aligned currents, were associated with polar arcs and they were likely caused by Kelvin-Helmholtz waves around the low-latitude magnetopause under a northward IMF Bz. The magnetic field lines around the magnetopause join together in the cusp region so are the field aligned currents and particle precipitation. This explains why polar arcs are cusp aligned.

  13. Alignment and alignment transition of bent core nematics

    NASA Astrophysics Data System (ADS)

    Elamain, Omaima; Hegde, Gurumurthy; Komitov, Lachezar

    2013-07-01

    We report on the alignment of nematics consisting of bimesogen bent core molecules of chlorine substituent of benzene derivative and their binary mixture with rod like nematics. It was found that the alignment layer made from polyimide material, which is usually used for promoting vertical (homeotropic) alignment of rod like nematics, promotes instead a planar alignment of the bent core nematic and its nematic mixtures. At higher concentration of the rod like nematic component in these mixtures, a temperature driven transition from vertical to planar alignment was found near the transition to isotropic phase.

  14. Nanofibril Alignment in Flow Focusing: Measurements and Calculations.

    PubMed

    Håkansson, Karl M O; Lundell, Fredrik; Prahl-Wittberg, Lisa; Söderberg, L Daniel

    2016-07-14

    Alignment of anisotropic supermolecular building blocks is crucial to control the properties of many novel materials. In this study, the alignment process of cellulose nanofibrils (CNFs) in a flow-focusing channel has been investigated using small-angle X-ray scattering (SAXS) and modeled using the Smoluchowski equation, which requires a known flow field as input. This flow field was investigated experimentally using microparticle-tracking velocimetry and by numerically applying the two-fluid level set method. A semidilute dispersion of CNFs was modeled as a continuous phase, with a higher viscosity as compared to that of water. Furthermore, implementation of the Smoluchowski equation also needed the rotational Brownian diffusion coefficient, which was experimentally determined in a shear viscosity measurement. The order of the nanofibrils was found to increase during extension in the flow-focusing channel, after which rotational diffusion acted on the orientation distribution, driving the orientation of the fibrils toward isotropy. The main features of the alignment and dealignment processes were well predicted by the numerical model, but the model overpredicted the alignment at higher rates of extension. The apparent rotational diffusion coefficient was seen to increase steeply as the degree of alignment increased. Thus, the combination of SAXS measurements and modeling provides the necessary framework for quantified studies of hydrodynamic alignment, followed by relaxation toward isotropy. PMID:27294285

  15. Cellular self-organization by autocatalytic alignment feedback

    PubMed Central

    Junkin, Michael; Leung, Siu Ling; Whitman, Samantha; Gregorio, Carol C.; Wong, Pak Kin

    2011-01-01

    Myoblasts aggregate, differentiate and fuse to form skeletal muscle during both embryogenesis and tissue regeneration. For proper muscle function, long-range self-organization of myoblasts is required to create organized muscle architecture globally aligned to neighboring tissue. However, how the cells process geometric information over distances considerably longer than individual cells to self-organize into well-ordered, aligned and multinucleated myofibers remains a central question in developmental biology and regenerative medicine. Using plasma lithography micropatterning to create spatial cues for cell guidance, we show a physical mechanism by which orientation information can propagate for a long distance from a geometric boundary to guide development of muscle tissue. This long-range alignment occurs only in differentiating myoblasts, but not in non-fusing myoblasts perturbed by microfluidic disturbances or other non-fusing cell types. Computational cellular automata analysis of the spatiotemporal evolution of the self-organization process reveals that myogenic fusion in conjunction with rotational inertia functions in a self-reinforcing manner to enhance long-range propagation of alignment information. With this autocatalytic alignment feedback, well-ordered alignment of muscle could reinforce existing orientations and help promote proper arrangement with neighboring tissue and overall organization. Such physical self-enhancement might represent a fundamental mechanism for long-range pattern formation during tissue morphogenesis. PMID:22193956

  16. Alignment as a Teacher Variable

    ERIC Educational Resources Information Center

    Porter, Andrew C.; Smithson, John; Blank, Rolf; Zeidner, Timothy

    2007-01-01

    With the exception of the procedures developed by Porter and colleagues (Porter, 2002), other methods of defining and measuring alignment are essentially limited to alignment between tests and standards. Porter's procedures have been generalized to investigating the alignment between content standards, tests, textbooks, and even classroom…

  17. Highly aligned vertical GaN nanowires using submonolayer metal catalysts

    DOEpatents

    Wang, George T.; Li, Qiming; Creighton, J. Randall

    2010-06-29

    A method for forming vertically oriented, crystallographically aligned nanowires (nanocolumns) using monolayer or submonolayer quantities of metal atoms to form uniformly sized metal islands that serve as catalysts for MOCVD growth of Group III nitride nanowires.

  18. A robust, automated alignment concept for robotics

    SciTech Connect

    Everett, L.J.; Redfield, R.C. . Dept. of Mechanical Engineering)

    1994-08-01

    A video-based pose sensor is presented that overcomes some of the common problems with typical robotic pose sensors. The Targeting and Reflective Alignment Concept (TRAC) sensor operates using the optics of reflection. TRAC is a robust sensor capable of both continuous and discrete pose sensing in the presence of a class of disturbance inputs (extraneous lighting). Key features of the sensor are its high sensitivity to orientation error, its decoupled handling of orientation and translation (without calibration transformations), and its ability to provide intuitive feedback to a human operator for tele-operation. The sensor has been shown successful at target tracking with a PUMA manipulator in the laboratory and in automatic positioning of NASA-JSC's Manipulator Development Facility (MDF) telemanipulator arm used for shuttle astronaut training.

  19. Engineering controllable architecture in matrigel for 3D cell alignment.

    PubMed

    Jang, Jae Myung; Tran, Si-Hoai-Trung; Na, Sang Cheol; Jeon, Noo Li

    2015-02-01

    We report a microfluidic approach to impart alignment in ECM components in 3D hydrogels by continuously applying fluid flow across the bulk gel during the gelation process. The microfluidic device where each channel can be independently filled was tilted at 90° to generate continuous flow across the Matrigel as it gelled. The presence of flow helped that more than 70% of ECM components were oriented along the direction of flow, compared with randomly cross-linked Matrigel. Following the oriented ECM components, primary rat cortical neurons and mouse neural stem cells showed oriented outgrowth of neuronal processes within the 3D Matrigel matrix. PMID:25585718

  20. Energy level alignment in Au/pentacene/PTCDA trilayer stacks

    NASA Astrophysics Data System (ADS)

    Sehati, P.; Braun, S.; Fahlman, M.

    2013-09-01

    Ultraviolet photoelectron spectroscopy is used to investigate the energy level alignment and molecular orientation at the interfaces in Au/pentacene/PTCDA trilayer stacks. We deduced a standing orientation for pentacene grown on Au while we conclude a flat lying geometry for PTCDA grown onto pentacene. We propose that the rough surface of polycrystalline Au induces the standing geometry in pentacene. It is further shown that in situ deposition of PTCDA on pentacene can influence the orientation of the surface pentacene layer, flipping part of the surface pentacene molecules into a flat lying geometry, maximizing the orbital interaction across the pentacene-PTCDA heterojunction.

  1. Quantitative analysis on orientation of human bone integrated with midpalatal implant by micro X-ray diffractometer

    NASA Astrophysics Data System (ADS)

    Murata, Masaru; Akazawa, Toshiyuki; Yuasa, Toshihiro; Okayama, Miki; Tazaki, Junichi; Hanawa, Takao; Arisue, Makoto; Mizoguchi, Itaru

    2012-12-01

    A midpalatal implant system has been used as the unmoved anchorage for teeth movement. An 18-year-old male patient presented with reversed occlusion and was diagnosed as malocclusion. A pure titanium fixture (lengths: 4 mm, diameter: 3.3 mm, Orthosystem®, Institute Straumann, Switzerland) was implanted into the palatal bone of the patient as the orthodontic anchorage. The implant anchorage was connected with the upper left and right first molars, and had been used for 3 years. After dynamic treatments, the titanium fixture connected with bone was removed surgically, fixed in formalin solution, and embedded in resin. Specimens were cut along the frontal section of face and the direction of longitudinal axis of the implant, stained, and observed histologically. The titanium fixture was integrated directly with compact bone showing cortical bone-like structure such as lamella and osteon. In addition, to qualitatively characterize the implant-supported human bone, the crystallinity and orientation of hydroxyapatite (HAp) phase were evaluated by the microbeam X-ray diffraction analysis. Preferential alignment of c-axis of HAp crystals was represented by the relative intensity ratio of (0 0 2)-face diffraction peak to (3 1 0)-face one. The values decreased monotonously along the direction of the lateral stress from the site near the implant thread to the distant site in all horizontal lines of the map. These results indicated that the X-ray images for the intensity of c-face in HAp revealed functionally graded distribution of cortical bone quality. The micro-scale measurements of HAp structure could be a useful method for evaluating the mechanical stress distribution in human hard tissues.

  2. Birefringence imaging and orientation of laser patterned β-BaB{sub 2}O{sub 4} crystals with bending and curved shapes in glass

    SciTech Connect

    Ogawa, Kazuki; Honma, Tsuyoshi; Komatsu, Takayuki

    2013-11-15

    Nonlinear optical β-BaB{sub 2}O{sub 4} crystals (β-BBO) with bending and curved shapes were patterned at the surface of 8Sm{sub 2}O{sub 3}–42BaO–50B{sub 2}O{sub 3} glass by laser irradiations (Yb:YVO{sub 4} laser with a wavelength of 1080 nm, power of 0.8 W, and scanning speed of 4 μm/s), and the orientation state of β-BBO crystals was examined from the birefringence imaging obtained by polarization optical microscope (POM) observations. The formation (crystallization) of β-BBO crystals follows along laser scanning direction even if the laser scanning direction changes at a certain point within the bending angle of 60°. The birefringence images indicate that the formation of highly c-axis oriented β-BBO crystals follows along laser scanning direction even if the laser scanning direction changes, and in particular the direction of the c-axis of β-BBO crystals changes gradually at the bending point. The model for the orientation of the c-axis of β-BBO near the bending point is proposed. The present study proposes that the laser-induced crystallization opens a new door for the science and technology in crystal growth engineering. - Graphical abstract: This figure shows the birefringence images obtained by the Abrio IM imaging system (λ=546 nm) for the laser-patterned β-BaB{sub 2}O{sub 4} crystal line with the bending angle of 45° in the glass. The relation between the direction of slow axis and color is also shown. It is demonstrated that the formation (crystallization) of highly c-axis oriented β-BaB{sub 2}O{sub 4} crystals follows along laser scanning direction even if the laser scanning direction changes. Display Omitted - Highlights: • β-BaB{sub 2}O{sub 4} crystals with bending and curved shapes were patterned by laser irradiations. • The orientation was examined from the birefringence imaging. • Highly c-axis oriented crystals follows along laser scanning direction. • The c-axis direction changes gradually at the bending point. • The

  3. Seedlayer and underlayer effects on the crystallographic orientation and magnetic recording performance of glass media

    NASA Astrophysics Data System (ADS)

    Zheng, Min; Choe, Geon; Johnson, Kenneth E.

    2002-05-01

    Seedlayer and underlayer effects on crystallographic orientation and recording performance were studied for CoCrPtB media sputtered on glass substrates. For this study, the seedlayers are XAl (X=Ni, Co, Ti, and Ru) and the underlayers are CrY (Y=V, Mo, W, and Ti). It was found that not only different seedlayers, but also different combinations of seedlayer and underlayer, led to different magnetic performance. NiAl and CoAl seedlayers orient the Co c axis to (10.0) and TiAl and RuAl seedlayers produce (11.0) Co orientation. For the NiAl and CoAl seedlayer, CrV and CrW underlayers develop less out-of-plane c-axis orientation and higher coercivity and coercive squareness while CrTi and CrMo underlayers work better for TiAl and RuAl seedlayers, respectively. Media with RuAl seedlayers have better parametric performance than media with NiAl and CoAl seedlayers. The detailed relationship between seedlayer and underlayer types and crystal orientation and recording performance is discussed.

  4. Solar Alignments of Greek Temples Revisited

    NASA Astrophysics Data System (ADS)

    Mickelson, M. E.; Higbie, C.

    2005-08-01

    The canonical opinion about the placement of Greek temples is that they are oriented east-west (Dinsmoor 1975). Major exceptions, such as the temple of Apollo at Bassae which faces approximately north-south, are noted in the literature, but many other temples are scattered across the Greek landscape in a variety of orientations but predominately (about 80 Although no surviving ancient author ever discusses the criteria for placing or orienting temples, we may assume from scattered remarks that Greeks had reasons for choosing the sites and orientations. In the last century, archaeologists and architects such as Nissen (1896), Penrose (1893) and Dinsmoor (1939), have measured the alignments of Greek temples on the Greek mainland, the west coast of Turkey, and the Aegean islands. Their data have varying degrees of precision and accuracy, as a recent paper by Papathanassiou (1994) makes clear. Parallel work done in Italy on Etruscan, Roman and Greek temples by Aveni and Romano (1994) provides further stimulus to re-investigate Greek temples. We have undertaken three field seasons in Greece in order to check previously reported alignments. Where possible, in addition to determining the orientation of foundations, we have attempted to determine the, location of doorways and other openings, placement of cult statues, horizon altitudes etc. In this preliminary study we hope to be able to discover patterns in the orientation of these temples which relate solar observations to temple ritual and thus extend Dinmoor's hypothesis. For some of these questions, we are dependent on literary and inscriptional evidence. This paper describes the preliminary measurements made over our three field seasons in Greece. Field methods and analysis of the data will be presented along with possible application. 1. Dinsmoor, W.B., The Architecture of Ancient Greece, 3rd ed. Rev. New York, 1975. 2. Nissen, H.,Das Templum,Antiquarische Untesuchungon (Berlin, 1896). 3. Penrose, F.C., Trans. Roy

  5. Vertically aligned liquid crystals on a {gamma}-Al{sub 2}O{sub 3} alignment film using ion-beam irradiation

    SciTech Connect

    Park, Hong-Gyu; Kim, Young-Hwan; Oh, Byeong-Yun; Lee, Won-Kyu; Kim, Byoung-Yong; Seo, Dae-Shik; Hwang, Jeong-Yeon

    2008-12-08

    Using ion-beam (IB) irradiation, liquid crystals (LCs) were vertically aligned (VA) on a {gamma}-Al{sub 2}O{sub 3} alignment film. Atomic-layer deposition was used to orient the LCs on high-quality {gamma}-Al{sub 2}O{sub 3} alignment films. The LC molecule orientation indicates the vertical direction of the atomic-layer-deposited {gamma}-Al{sub 2}O{sub 3} alignment films. X-ray photoelectron spectroscopy showed that IB irradiation changed the chemical structure, shifting the Al-O binding energy and altering the Al-O bonding intensity. The low-voltage transmittance characteristics of the VA LC displays on the {gamma}-Al{sub 2}O{sub 3} alignment films were also measured, showing reduced voltage and power requirements.

  6. Solar Alignments - Identification and Analysis

    NASA Astrophysics Data System (ADS)

    Belmonte, Juan Antonio

    The sun was such an important divinity in antiquity, and even today, that solar alignments should be expected within a large variety of places and cultures. These are probably the most conspicuous kind of astronomical alignments a field researcher can deal with. The need for a correct identification is thus evident. The different kind of solar phenomena susceptible of being determined by astronomical alignments will be scrutinized, following by the way in which such alignments can materialize in space. It will be shown that analyzing solar alignments is not always an easy task.

  7. Body Shell Alignment; Auto Body Repair and Refinishing 2: 9035.02.

    ERIC Educational Resources Information Center

    Dade County Public Schools, Miami, FL.

    The course provides skills in the use of tools and procedures for the alignment of automotive body damage. Course content includes goals, specific objectives, orientation, service tools and bench skills, and body construction. Also studied are collision damage, aligning body shell and components, and replacement of sheet metal parts. A…

  8. Analytical alignment tolerances for off-plane reflection grating spectroscopy

    NASA Astrophysics Data System (ADS)

    Allured, Ryan; McEntaffer, Randall T.

    2013-12-01

    Future NASA X-ray Observatories will shed light on a variety of high-energy astrophysical phenomena. Off-plane reflection gratings can be used to provide high throughput and spectral resolution in the 0.3-1.5 keV band, allowing for unprecedented diagnostics of energetic astrophysical processes. A grating spectrometer consists of multiple aligned gratings intersecting the converging beam of a Wolter-I telescope. Each grating will be aligned such that the diffracted spectra overlap at the focal plane. Misalignments will degrade both spectral resolution and effective area. In this paper we present an analytical formulation of alignment tolerances that define grating orientations in all six degrees of freedom. We verify our analytical results with raytrace simulations to fully explore the alignment parameter space. We also investigate the effect of misalignments on diffraction efficiency.

  9. Alignment of atmospheric mineral dust due to electric field

    NASA Astrophysics Data System (ADS)

    Ulanowski, Z.; Bailey, J.; Lucas, P. W.; Hough, J. H.; Hirst, E.

    2007-09-01

    Optical polarimetry observations on La Palma, Canary Islands, during a Saharan dust episode show dichroic extinction consistent with the presence of vertically aligned particles in the atmosphere. Modelling of the extinction together with particle orientation indicates that the alignment could have been due to an electric field of the order of 2 kV/m. Two alternative mechanisms for the origin of the field are examined: the effect of reduced atmospheric conductivity and charging of the dust layer, the latter effect being a more likely candidate. It is concluded that partial alignment may be a common feature of Saharan dust layers. The modelling also indicates that the alignment can significantly alter dust optical depth. This "Venetian blind effect" may have decreased optical thickness in the vertical direction by as much as 10% for the case reported here.

  10. Alignment of CH3F in para-H2 crystal studied by IR quantum cascade laser polarization spectroscopy.

    PubMed

    Kawasaki, Hiroyuki; Mizoguchi, Asao; Kanamori, Hideto

    2016-05-14

    In order to investigate the alignment of CH3F in para-H2 crystals, high resolution polarization spectroscopy of the ν3 vibrational band is studied using a quantum cascade laser at 1040 cm(-1). It is found that the main and satellite series of peaks in the ν3 vibrational band of CH3F have the same polarization dependence. This result supports the previously proposed cluster model with ortho-H2 in first and second nearest neighbor sites. The observed polarization dependence function is well described by a simple six-axis void model in which CH3F is not aligned along the c-axis of the crystal but tilted to 64.9(3)° from it. PMID:27179483

  11. Alignment of CH3F in para-H2 crystal studied by IR quantum cascade laser polarization spectroscopy

    NASA Astrophysics Data System (ADS)

    Kawasaki, Hiroyuki; Mizoguchi, Asao; Kanamori, Hideto

    2016-05-01

    In order to investigate the alignment of CH3F in para-H2 crystals, high resolution polarization spectroscopy of the ν3 vibrational band is studied using a quantum cascade laser at 1040 cm-1. It is found that the main and satellite series of peaks in the ν3 vibrational band of CH3F have the same polarization dependence. This result supports the previously proposed cluster model with ortho-H2 in first and second nearest neighbor sites. The observed polarization dependence function is well described by a simple six-axis void model in which CH3F is not aligned along the c-axis of the crystal but tilted to 64.9(3)° from it.

  12. TSGC and JSC Alignment

    NASA Technical Reports Server (NTRS)

    Sanchez, Humberto

    2013-01-01

    NASA and the SGCs are, by design, intended to work closely together and have synergistic Vision, Mission, and Goals. The TSGC affiliates and JSC have been working together, but not always in a concise, coordinated, nor strategic manner. Today we have a couple of simple ideas to present about how TSGC and JSC have started to work together in a more concise, coordinated, and strategic manner, and how JSC and non-TSG Jurisdiction members have started to collaborate: Idea I: TSGC and JSC Technical Alignment Idea II: Concept of Clusters.

  13. Hydrothermal synthesis of highly crystalline ZnO nanorod arrays: Dependence of morphology and alignment on growth conditions

    NASA Astrophysics Data System (ADS)

    Azzez, Shrook A.; Hassan, Z.; Hassan, J. J.; Alimanesh, M.; Rasheed, Hiba S.; Sabah, Fayroz A.; Abdulateef, Sinan A.

    2016-07-01

    Highly oriented zinc oxide nanorod were successfully grown on seeded p-type silicone substrate by hydrothermal methode. The morphology and the crystallinty of ZnO c-axis (002) arrays were systematically studied using field emission scanning electron microscopy (FESEM) and X-ray diffraction (XRD) methods. The effect of seed layer pre-annealing on nanorods properties was explained according to the nucleation site of ZnO nanoparticles on silicon substrate. In addition, the variation of the equal molarity of zinc nitrate hexahydrate and hexamine concentrations in the reaction vessel play a crucial role related to the ZnO nanorods.

  14. Automated quantification of one-dimensional nanostructure alignment on surfaces.

    PubMed

    Dong, Jianjin; Goldthorpe, Irene A; Abukhdeir, Nasser Mohieddin

    2016-06-10

    A method for automated quantification of the alignment of one-dimensional (1D) nanostructures from microscopy imaging is presented. Nanostructure alignment metrics are formulated and shown to be able to rigorously quantify the orientational order of nanostructures within a two-dimensional domain (surface). A complementary image processing method is also presented which enables robust processing of microscopy images where overlapping nanostructures might be present. Scanning electron microscopy (SEM) images of nanowire-covered surfaces are analyzed using the presented methods and it is shown that past single parameter alignment metrics are insufficient for highly aligned domains. Through the use of multiple parameter alignment metrics, automated quantitative analysis of SEM images is shown to be possible and the alignment characteristics of different samples are able to be quantitatively compared using a similarity metric. The results of this work provide researchers in nanoscience and nanotechnology with a rigorous method for the determination of structure/property relationships, where alignment of 1D nanostructures is significant. PMID:27119552

  15. Automated quantification of one-dimensional nanostructure alignment on surfaces

    NASA Astrophysics Data System (ADS)

    Dong, Jianjin; Goldthorpe, Irene A.; Mohieddin Abukhdeir, Nasser

    2016-06-01

    A method for automated quantification of the alignment of one-dimensional (1D) nanostructures from microscopy imaging is presented. Nanostructure alignment metrics are formulated and shown to be able to rigorously quantify the orientational order of nanostructures within a two-dimensional domain (surface). A complementary image processing method is also presented which enables robust processing of microscopy images where overlapping nanostructures might be present. Scanning electron microscopy (SEM) images of nanowire-covered surfaces are analyzed using the presented methods and it is shown that past single parameter alignment metrics are insufficient for highly aligned domains. Through the use of multiple parameter alignment metrics, automated quantitative analysis of SEM images is shown to be possible and the alignment characteristics of different samples are able to be quantitatively compared using a similarity metric. The results of this work provide researchers in nanoscience and nanotechnology with a rigorous method for the determination of structure/property relationships, where alignment of 1D nanostructures is significant.

  16. Polymeric templating and alignment of fullerenes

    NASA Astrophysics Data System (ADS)

    Kincer, Matthew Ryan

    Fullerene research has advanced to elevated levels in a short period of time due to the unique chemical and physical properties of the caged molecule that have been utilized in numerous applications. Due to the spherical shape of the fullerene molecule which allows for a hollow cavity, encapsulation of atoms or small molecules can occur within the ball structure. This encapsulation creates an endohedral component that is limited from interacting with other molecules which creates potential of control over electronic information of the isolated molecule. Endohedral fullerenes have the potential as serving as the base unit in a quantum computer if control over global alignment is attained. Thus, by using the inherent self-assembling capabilities of some organic materials, ordered endohedral fullerenes can be achieved. This dissertation investigates the ability to use self-assembling strategies to obtain alignment which include ordering within a morphologically controlled copolymer matrix, forming a supramolecular polymer complex with cyclodextrin, and encapsulation within the helical wrap of polymer chains. The ultimate goal is to understand the dynamics that control association and orientation of varying fullerene-based molecules in each strategy in order to maximize control over the final alignment of endohedral elements.

  17. Functionalization of vertically aligned carbon nanotubes

    PubMed Central

    Snyders, Rony; Colomer, Jean-François

    2013-01-01

    Summary This review focuses and summarizes recent studies on the functionalization of carbon nanotubes oriented perpendicularly to their substrate, so-called vertically aligned carbon nanotubes (VA-CNTs). The intrinsic properties of individual nanotubes make the VA-CNTs ideal candidates for integration in a wide range of devices, and many potential applications have been envisaged. These applications can benefit from the unidirectional alignment of the nanotubes, the large surface area, the high carbon purity, the outstanding electrical conductivity, and the uniformly long length. However, practical uses of VA-CNTs are limited by their surface characteristics, which must be often modified in order to meet the specificity of each particular application. The proposed approaches are based on the chemical modifications of the surface by functionalization (grafting of functional chemical groups, decoration with metal particles or wrapping of polymers) to bring new properties or to improve the interactions between the VA-CNTs and their environment while maintaining the alignment of CNTs. PMID:23504581

  18. Aligning Paramecium caudatum with static magnetic fields.

    PubMed

    Guevorkian, Karine; Valles, James M

    2006-04-15

    As they negotiate their environs, unicellular organisms adjust their swimming in response to various physical fields such as temperature, chemical gradients, and electric fields. Because of the weak magnetic properties of most biological materials, however, they do not respond to the earth's magnetic field (5 x 10(-5) Tesla) except in rare cases. Here, we show that the trajectories of Paramecium caudatum align with intense static magnetic fields >3 Tesla. Otherwise straight trajectories curve in magnetic fields and eventually orient parallel or antiparallel to the applied field direction. Neutrally buoyant immobilized paramecia also align with their long axis in the direction of the field. We model this magneto-orientation as a strictly passive, nonphysiological response to a magnetic torque exerted on the diamagnetically anisotropic components of the paramecia. We have determined the average net anisotropy of the diamagnetic susceptibility, Deltachi(p), of a whole Paramecium: Deltachi(p) = (6.7+/- 0.7) x 10(-23) m(3). We show how the measured Deltachi(p) compares to the anisotropy of the diamagnetic susceptibilities of the components in the cell. We suggest that magnetic fields can be exploited as a novel, noninvasive, quantitative means to manipulate swimming populations of unicellular organisms. PMID:16461406

  19. Vertically aligned biaxially textured molybdenum thin films

    SciTech Connect

    Krishnan, Rahul; Riley, Michael; Lee, Sabrina; Lu, Toh-Ming

    2011-09-15

    Vertically aligned, biaxially textured molybdenum nanorods were deposited using dc magnetron sputtering with glancing flux incidence (alpha = 85 degrees with respect to the substrate normal) and a two-step substrate-rotation mode. These nanorods were identified with a body-centered cubic crystal structure. The formation of a vertically aligned biaxial texture with a [110] out-of-plane orientation was combined with a [-110] in-plane orientation. The kinetics of the growth process was found to be highly sensitive to an optimum rest time of 35 seconds for the two-step substrate rotation mode. At all other rest times, the nanorods possessed two separate biaxial textures each tilted toward one flux direction. While the in-plane texture for the vertical nanorods maintains maximum flux capture area, inclined Mo nanorods deposited at alpha = 85 degrees without substrate rotation display a [-1-1-4] in-plane texture that does not comply with the maximum flux capture area argument. Finally, an in situ capping film was deposited with normal flux incidence over the biaxially textured vertical nanorods resulting in a thin film over the porous nanorods. This capping film possessed the same biaxial texture as the nanorods and could serve as an effective substrate for the epitaxial growth of other functional materials.

  20. Influence of Gas Flow Rate for Formation of Aligned Nanorods in ZnO Thin Films for Solar-Driven Hydrogen Production

    SciTech Connect

    Shet, S.; Chen, L.; Tang, H.; Nuggehalli, R.; Wang, H.; Yan, Y.; Turner, J.; Al-Jassim, M.

    2012-04-01

    ZnO thin films have been deposited in mixed Ar/N{sub 2} gas ambient at substrate temperature of 500 C by radiofrequency sputtering of ZnO targets. We find that an optimum N{sub 2}-to-Ar ratio in the deposition ambient promotes the formation of well-aligned nanorods. ZnO thin films grown in ambient with 25% N{sub 2} gas flow rate promoted nanorods aligned along c-axis and exhibit significantly enhanced photoelectrochemical (PEC) response, compared with ZnO thin films grown in an ambient with different N{sub 2}-to-Ar gas flow ratios. Our results suggest that chamber ambient is critical for the formation of aligned nanostructures, which offer potential advantages for improving the efficiency of PEC water splitting for H{sub 2} production.

  1. Conditional alignment random fields for multiple motion sequence alignment.

    PubMed

    Kim, Minyoung

    2013-11-01

    We consider the multiple time-series alignment problem, typically focusing on the task of synchronizing multiple motion videos of the same kind of human activity. Finding an optimal global alignment of multiple sequences is infeasible, while there have been several approximate solutions, including iterative pairwise warping algorithms and variants of hidden Markov models. In this paper, we propose a novel probabilistic model that represents the conditional densities of the latent target sequences which are aligned with the given observed sequences through the hidden alignment variables. By imposing certain constraints on the target sequences at the learning stage, we have a sensible model for multiple alignments that can be learned very efficiently by the EM algorithm. Compared to existing methods, our approach yields more accurate alignment while being more robust to local optima and initial configurations. We demonstrate its efficacy on both synthetic and real-world motion videos including facial emotions and human activities. PMID:24051737

  2. Crystallographic alignment evolution and magnetic properties of anisotropic Sm0.6Pr0.4Co5 nanoflakes prepared by surfactant-assisted ball milling

    NASA Astrophysics Data System (ADS)

    Xu, M. L.; Wu, Q.; Li, Y. Q.; Liu, W. Q.; Lu, Q. M.; Yue, M.

    2015-08-01

    The microstructure, crystal structure and magnetic properties were studied for Sm0.6Pr0.4Co5 nanoflakes prepared by surfactant-assisted high-energy ball milling (SAHEBM). Effect of ball-milling time on the c-axis crystallographic alignment, morphology and magnetic properties of Sm0.6Pr0.4Co5 nanoflakes was systematically investigated. With increasing milling time from 1 h to 7 h, the intensity ratio between (002) and (111) reflection peaks indicating degree of c-axis crystal texture of the (Sm, Pr)Co5 phase increases first, peaks at 3 h, then drops again, revealing that the strongest c-axis crystal texture was obtained in the nanoflakes milled for 3 h. On the other hand, the coercivity (Hci) of the flakes increases gradually from 1.71 to 14.65 kOe with the increase of ball milling time. As a result, an optimal magnetic properties of Mr of 10.23 kGs, Hci of 11.45 kOe and (BH)max of 24.40 MGOe was obtained in Sm0.6Pr0.4Co5 nanoflakes milled for 3 h, which also displayed a high aspect ratio, small in-plane size, pronounced (001) out-of-plane texture.

  3. Industrial Orientation.

    ERIC Educational Resources Information Center

    Rasor, Leslie; Brooks, Valerie

    These eight modules for an industrial orientation class were developed by a project to design an interdisciplinary program of basic skills training for disadvantaged students in a Construction Technology Program (see Note). The Drafting module overviews drafting career opportunities, job markets, salaries, educational requirements, and basic…

  4. Biological control of crystallographic architecture: hierarchy and co-alignment parameters.

    PubMed

    Maier, B J; Griesshaber, E; Alexa, P; Ziegler, A; Ubhi, H S; Schmahl, W W

    2014-09-01

    Mytilus edulis prismatic calcite and nacre layers exhibit a crystallographic structural hierarchy which differs substantially from the morphological hierarchy. This makes these biomaterials fundamentally different from classical crystalline materials. Morphological building units are defined by their surrounding organic matrix membranes, e.g. calcite fibers or nacre tablets. The crystallographic building units are defined by crystallographic co-orientation. Electron backscatter diffraction quantitatively shows how crystallographic co-orientation propagates across matrix membranes to form highly co-oriented low-mosaic composite-crystal grains, i.e. calcite fiber bundles with an internal mosaic spread of 0.5° full width at half maximum (FWHM) or nacre towergrains with an internal mosaic spread of 2° FWHM. These low-mosaic composite crystals form much larger composite-crystal supergrains, which exhibit a high mosaicity due to misorientations of their constituting calcite fiber bundles or nacre towergrains. For the aragonite layer these supergrains nucleate in one of three aragonite {110} twin orientations; as a consequence the nacre layer exhibits a twin-domain structure, i.e. the boundaries of adjacent supergrains exhibit a high probability for misorientations around the aragonite c-axis with an angle near 63.8°. Within the supergrains, the constituting towergrains exhibit a high probability for misorientations around the aragonite a-axis with a geometric mean misorientation angle of 10.6°. The calcite layer is composed of a single composite-crystal supergrain on at least the submillimeter length scale. Mutual misorientations of adjacent fiber bundles within the calcite supergrain are mainly around the calcite c-axis with a geometric mean misorientation angle of 9.4°. The c-axis is not parallel to the long axis of the fibers but rather to the (107) plane normal. The frequency distribution for the occurrence of misorientation angles within supergrains reflects

  5. Intrinsic alignments in redMaPPer clusters - I. Central galaxy alignments and angular segregation of satellites

    NASA Astrophysics Data System (ADS)

    Huang, Hung-Jin; Mandelbaum, Rachel; Freeman, Peter E.; Chen, Yen-Chi; Rozo, Eduardo; Rykoff, Eli; Baxter, Eric J.

    2016-08-01

    The shapes of cluster central galaxies are not randomly oriented, but rather exhibit coherent alignments with the shapes of their parent clusters as well as with the surrounding large-scale structures. In this work, we aim to identify the galaxy and cluster quantities that most strongly predict the central galaxy alignment phenomenon among a large parameter space with a sample of 8237 clusters and 94817 members within 0.1 < z < 0.35, based on the redMaPPer cluster catalog constructed from the Sloan Digital Sky Survey. We first quantify the alignment between the projected central galaxy shapes and the distribution of member satellites, to understand what central galaxy and cluster properties most strongly correlate with these alignments. Next, we investigate the angular segregation of satellites with respect to their central galaxy major axis directions, to identify the satellite properties that most strongly predict their angular segregation. We find that central galaxies are more aligned with their member galaxy distributions in clusters that are more elongated and have higher richness, and for central galaxies with larger physical size, higher luminosity and centering probability, and redder color. Satellites with redder color, higher luminosity, located closer to the central galaxy, and with smaller ellipticity show a stronger angular segregation toward their central galaxy major axes. Finally, we provide physical explanations for some of the identified correlations, and discuss the connection to theories of central galaxy alignments, the impact of primordial alignments with tidal fields, and the importance of anisotropic accretion.

  6. The effect of size, orientation and alloying on the deformation of AZ31 nanopillars

    NASA Astrophysics Data System (ADS)

    Aitken, Zachary H.; Fan, Haidong; El-Awady, Jaafar A.; Greer, Julia R.

    2015-03-01

    We conducted uniaxial compression of single crystalline Mg alloy, AZ31 (Al 3 wt% and Zn 1 wt%) nanopillars with diameters between 300 and 5000 nm with two distinct crystallographic orientations: (1) along the [0001] c-axis and (2) at an acute angle away from the c-axis, nominally oriented for basal slip. We observe single slip deformation for sub-micron samples nominally oriented for basal slip with the deformation commencing via a single set of parallel shear offsets. Samples compressed along the c-axis display an increase in yield strength compared to basal samples as well as significant hardening with the deformation being mostly homogeneous. We find that the "smaller is stronger" size effect in single crystals dominates any improvement in strength that may have arisen from solid solution strengthening. We employ 3D-discrete dislocation dynamics (DDD) to simulate compression along the [0001] and [ 11 2 bar 2 ] directions to elucidate the mechanisms of slip and evolution of dislocation microstructure. These simulations show qualitatively similar stress-strain signatures to the experimentally obtained stress-strain data. Simulations of compression parallel to the [ 11 2 bar 2 ] direction reveal the activation and motion of only -type dislocations and virtually no dislocation junction formation. Computations of compression along [0001] show the activation and motion of both and dislocations along with a significant increase in the formation of junctions corresponding to the interaction of intersecting pyramidal planes. Both experiments and simulation show a size effect, with a differing exponent for basal and pyramidal slip. We postulate that this anisotropy in size effect is a result of the underlying anisotropic material properties only. We discuss these findings in the context of the effective resolved shear stress relative to the unit Burgers vector for each type of slip, which reveal that the mechanism that governs size effect in this Mg-alloy is

  7. Current-voltage characteristics of Bi{sub 2}Sr{sub 2}CaCu{sub 2}O{sub 8-{delta}} in the c-axis direction

    SciTech Connect

    Takeya, J.; Akita, S.; Kishio, K.

    1997-06-01

    Current-voltage (I-V) characteristics of Bi{sub 2}Sr{sub 2}CaCu{sub 2}O{sub 8+{delta}} single crystals were measured in the c-axis direction as a function of temperature and magnetic field parallel to the current. In order to eliminate heating effect, a voltage pulse with a width of 0.5 - 1 {mu}s was applied for each I-V point. The authors found an ohmic region far below the gap voltage. The ohmic resistance increased with decreasing temperature and grew 30 times larger at 4.2 K than that at room temperature. Magnetic field strongly suppressed the critical current but did not change this ohmic resistance. These behaviors can be explained by a semiconductive shunt resistance connected in parallel to a stack of Josephson junctions. By applying two-step voltage pulses, the authors observed a hysteretic feature of the intrinsic Josephson junctions. Crystals with different oxygen contents showed a large variation in critical current, normal resistance, the shunt resistance at low temperature and the degree of hysteresis due to a difference in anisotropy ratios. Utilizing the bistability revealed by the hysteretic feature, the Bi2212 crystal can function as a switching device in the c-direction. A natural stack of many junctions will exhibit large response voltage, which is a great advantage for application to power devices.

  8. Fourier transform interferometer alignment method.

    PubMed

    Goldberg, Kenneth A; Naulleau, Patrick; Bokor, Jeffrey

    2002-08-01

    A rapid and convenient method has been developed to facilitate the alignment of the image-plane components of point-diffraction interferometers, including the phase-shifting point-diffraction interferometer. In real time, the Fourier transform of the detected image is used to calculate a pseudoimage of the electric field in the image plane of the test optic where thecritical alignment o f variousoptical components is performed. Reconstruction of the pseudoimage is similar to off-axis, Fourier transform holography. Intermediate steps in the alignment procedure are described. Fine alignment is aided by the introduction and optimization of a global-contrast parameter that is easily calculated from the Fourier transform. Additional applications include the alignment of image-plane apertures in general optical systems, the rapid identification of patterned image-plane alignment marks, and the probing of important image-plane field properties. PMID:12153074

  9. Onorbit IMU alignment error budget

    NASA Technical Reports Server (NTRS)

    Corson, R. W.

    1980-01-01

    The Star Tracker, Crew Optical Alignment Sight (COAS), and Inertial Measurement Unit (IMU) from a complex navigation system with a multitude of error sources were combined. A complete list of the system errors is presented. The errors were combined in a rational way to yield an estimate of the IMU alignment accuracy for STS-1. The expected standard deviation in the IMU alignment error for STS-1 type alignments was determined to be 72 arc seconds per axis for star tracker alignments and 188 arc seconds per axis for COAS alignments. These estimates are based on current knowledge of the star tracker, COAS, IMU, and navigation base error specifications, and were partially verified by preliminary Monte Carlo analysis.

  10. Vestibular compensation and orientation during locomotion

    NASA Technical Reports Server (NTRS)

    Raphan, T.; Imai, T.; Moore, S. T.; Cohen, B.

    2001-01-01

    Body, head, and eye movements were studied in three dimensions while walking and turning to determine the role of the vestibular system in directing gaze and maintaining spatial orientation. The body, head, and eyes were represented as three-dimensional coordinate frames, and the movement of these frames was related to a trajectory frame that described the motion of the body on a terrestrial plane. The axis-angle of the body, head, and eye rotation were then compared to the axis-angle of the rotation of the gravitoinertial acceleration (GIA). We inferred the role of the vestibular system during locomotion and the contributions of the VCR and VOR by examining the interrelationship between these coordinate frames. Straight walking induced head and eye rotations in a compensatory manner to the linear accelerations, maintaining head pointing and gaze along the direction of forward motion. Turning generated a combination of compensation and orientation responses. The head leads and steers the turn while the eyes compensate to maintain stable horizontal gaze in space. Saccades shift horizontal gaze as the turn is executed. The head pitches, as during straight walking. It also rolls so that the head tends to align with the orientation of the GIA. Head orientation changes anticipate orientation changes of the GIA. Eye orientation follows the changes in GIA orientation so that the net orientation gaze is closer to the orientation of the GIA. The study indicates that the vestibular system utilizes compensatory and orienting mechanisms to stabilize spatial orientation and gaze during walking and turning.

  11. Aligned Defrosting Dunes

    NASA Technical Reports Server (NTRS)

    2004-01-01

    17 August 2004 This July 2004 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a group of aligned barchan sand dunes in the martian north polar region. At the time, the dunes were covered with seasonal frost, but the frost had begun to sublime away, leaving dark spots and dark outlines around the dunes. The surrounding plains exhibit small, diffuse spots that are also the result of subliming seasonal frost. This northern spring image, acquired on a descending ground track (as MGS was moving north to south on the 'night' side of Mars) is located near 78.8oN, 34.8oW. The image covers an area about 3 km (1.9 mi) across and sunlight illuminates the scene from the upper left.

  12. Alignment system for encoders

    NASA Technical Reports Server (NTRS)

    Villani, Daniel D. (Inventor)

    1988-01-01

    An improved encoder alignment system is disclosed which provides an indication of the extent of misalignment and a measure of the rate at which the misalignment may be changing. The invention is adapted for use with a conventional encoder which provides a digital coarse word having at least significant bit and a digital fine word having a least significant bit and a most significant bit. The invention generates the exclusive or of the least significant bit of the coarse digital signal and the least significant bit of the fine digital signal to provide a first signal. The invention then generates the exclusive or of the first signal and the complement of the most significant bit of the fine digital signal to provide an output signal which represents the misalignment of the encoder.

  13. Lunar Alignments - Identification and Analysis

    NASA Astrophysics Data System (ADS)

    González-García, A. César

    Lunar alignments are difficult to establish given the apparent lack of written accounts clearly pointing toward lunar alignments for individual temples. While some individual cases are reviewed and highlighted, the weight of the proof must fall on statistical sampling. Some definitions for the lunar alignments are provided in order to clarify the targets, and thus, some new tools are provided to try to test the lunar hypothesis in several cases, especially in megalithic astronomy.

  14. Gold Alignment and Internal Dissipation

    NASA Astrophysics Data System (ADS)

    Lazarian, A.

    1997-07-01

    The measures of mechanical alignment are obtained for both prolate and oblate grains whose temperatures are comparable to the grain kinetic energy divided by k, the Boltzmann constant. For such grains, the alignment of angular momentum, J, with the axis of maximal inertia, a, is only partial, which substantially alters the mechanical alignment as compared with the results obtained by Lazarian and Roberge, Hanany, & Messinger under the assumption of perfect alignment. We also describe Gold alignment when the Barnett dissipation is suppressed and derive an analytical expression that relates the measure of alignment to the parameters of grain nonsphericity and the direction of the gas-grain drift. This solution provides the lower limit for the measure of alignment, while the upper limit is given by the method derived by Lazarian. Using the results of a recent study of incomplete internal relaxation by Lazarian & Roberge, we find measures of alignment for the whole range of ratios of grain rotational energy to kTs, where Ts is the grain temperature. To describe alignment for mildly supersonic drifts, we suggest an analytical approach that provides good correspondence with the results of direct numerical simulations by Roberge, Hanany, & Messinger. We also extend our approach to account for simultaneous action of the Gold and Davis-Greenstein mechanisms.

  15. Cattle on pastures do align along the North-South axis, but the alignment depends on herd density.

    PubMed

    Slaby, P; Tomanova, K; Vacha, M

    2013-08-01

    Alignment is a spontaneous behavioral preference of particular body orientation that may be seen in various vertebrate or invertebrate taxa. Animals often optimize their positions according to diverse directional environmental factors such as wind, stream, slope, sun radiation, etc. Magnetic alignment represents the simplest directional response to the geomagnetic field and a growing body of evidence of animals aligning their body positions according to geomagnetic lines whether at rest or during feedings is accumulating. Recently, with the aid of Google Earth application, evidence of prevailing North-South (N-S) body orientation of cattle on pastures was published (Begall et al. PNAS 105:13451-13455, 2008; Burda et al. PNAS 106:5708-5713, 2009). Nonetheless, a subsequent study from a different laboratory did not confirm this phenomenon (Hert et al. J Comp Physiol A 197:677-682, 2011). The aim of our study was to enlarge the pool of independently gained data on this remarkable animal behavior. By satellite snapshots analysis and using blinded protocol we scored positions of 2,235 individuals in 74 herds. Our results are in line with the original findings of prevailing N-S orientation of grazing cattle. In addition, we found that mutual distances between individual animals within herds (herd density) affect their N-S preference-a new phenomenon giving some insight into biological significance of alignment. PMID:23700176

  16. Tilted Liquid Crystal Alignment on Asymmetrically Grooved Porous Alumina Film

    NASA Astrophysics Data System (ADS)

    Maeda, Tsuyoshi; Hiroshima, Kohki

    2005-06-01

    This paper reports the achievement of tilted liquid crystal (LC) alignment on an anodic porous alumina (APA) film using microgrooves with asymmetric shapes and dozens of minute pores. The microgrooves with asymmetric shapes were formed by a rubbing technique. The minute pores were then produced by anodization. The LC pretilt angle was controlled by the shapes of the microgrooves and pores. The LC director was orientated in the same inclining direction as that of a rubbed polyimide (PI) film. The pretilt angle was in the range of 20 to 90°. This tilted LC alignment remains very stable against external forces such as thermal shock and intense light.

  17. Field-free molecular alignment for probing collisional relaxation dynamics

    NASA Astrophysics Data System (ADS)

    Vieillard, Th.; Chaussard, F.; Billard, F.; Sugny, D.; Faucher, O.; Ivanov, S.; Hartmann, J.-M.; Boulet, C.; Lavorel, B.

    2013-02-01

    We report the experimental study of field-free molecular alignment in CO2 gas mixtures induced by intense femtosecond laser pulses in the presence of collisional processes. We demonstrate that the alignment signals exhibit specific features due to nontrivial collisional propensity rules that tend to preserve the orientation of the rotational angular momentum of the molecules. The analysis is performed with a quantum approach based on the modeling of rotational J- and M-dependent state-to-state transfer rates. The present work paves the way for strong-field spectroscopy of collisional dynamics.

  18. Alignment of the diamond nitrogen vacancy center by strain engineering

    SciTech Connect

    Karin, Todd; Dunham, Scott; Fu, Kai-Mei

    2014-08-04

    The nitrogen vacancy (NV) center in diamond is a sensitive probe of magnetic field and a promising qubit candidate for quantum information processing. The performance of many NV-based devices improves by aligning the NV(s) parallel to a single crystallographic direction. Using ab initio theoretical techniques, we show that NV orientation can be controlled by high-temperature annealing in the presence of strain under currently accessible experimental conditions. We find that (89 ± 7)% of NVs align along the [111] crystallographic direction under 2% compressive biaxial strain (perpendicular to [111]) and an annealing temperature of 970 °C.

  19. Cell Alignment Required in Differentiation of Myxococcus xanthus

    NASA Astrophysics Data System (ADS)

    Kim, Seung K.; Kaiser, Dale

    1990-08-01

    During fruiting body morphogenesis of Myxococcus xanthus, cell movement is required for transmission of C-factor, a short range intercellular signaling protein necessary for sporulation and developmental gene expression. Nonmotile cells fail to sporulate and to express C-factor-dependent genes, but both defects were rescued by a simple manipulation of cell position that oriented the cells in aligned, parallel groups. A similar pattern of aligned cells normally results from coordinated recruitment of wild-type cells into multicellular aggregates, which later form mature fruiting bodies. It is proposed that directed cell movement establishes critical contacts between adjacent cells, which are required for efficient intercellular C-factor transmission.

  20. Domain-orientation dependence of levitation force in seeded melt grown single-domain YBa{sub 2}Cu{sub 3}O{sub x}

    SciTech Connect

    Shi, D.; Qu, D.; Sagar, S.; Lahiri, K.

    1997-06-01

    Domain-orientation dependence of levitation force has been determined for single-domain YBa{sub 2}Cu{sub 3}O{sub x}. The single-domain material is obtained from a seeded melt growth process. The levitation force has been found to reach a maximum as the c axis of the domain is parallel to the direction of the force. The levitation force decreases in a cosine law fashion as the angle {theta} (the angle between the direction of the force and the c axis) increases from 0{degree} to 60{degree}. A maximum anisotropy of levitation force of 2.29 has been found. A physical model is proposed to explain the observed orientation dependence. {copyright} {ital 1997 American Institute of Physics.}

  1. Protalign: a 3-dimensional protein alignment assessment tool.

    PubMed

    Meads, D; Hansen, M D; Pang, A

    1999-01-01

    Protein fold recognition (sometimes called threading) is the prediction of a protein's 3-dimensional shape based on its similarity to a protein of known structure. Fold predictions are low resolution; that is, no effort is made to rotate the protein's component amino acid side chains into their correct spatial orientations. The goal is simply to recognize the protein family member that most closely resembles the target sequence of unknown structure and to create a sensible alignment of the target to the known structure (i.e., a structure-sequence alignment). To facilitate this type of structure prediction, we have designed a low resolution molecular graphics tool. ProtAlign introduces the ability to interact with and edit alignments directly in the 3-dimensional structure as well as in the usual 2-dimensional layout. It also contains several functions and features to help the user assess areas within the alignment. ProtAlign implements an open pipe architecture to allow other programs to access its molecular graphics capabilities. In addition, it is capable of "driving" other programs. Because amino acid side chain orientation is not relevant in fold recognition, we represent amino acid residues as abstract shapes or glyphs much like Lego (tm) blocks and we borrow techniques from comparative flow visualization using streamlines to provide clean depictions of the entire protein model. By creating a low resolution representation of protein structure, we are able to at least double the amount of information on the screen. At the same time, we create a view that is not as busy as the corresponding representations using traditional high resolution visualization methods which show detailed atomic structure. This eliminates distracting and possibly misleading visual clutter resulting from the mapping of protein alignment information onto a high resolution display of the known structure. This molecular graphics program is implemented in Open GL to facilitate porting to

  2. Magnetic alignment in grazing and resting cattle and deer

    PubMed Central

    Begall, Sabine; Červený, Jaroslav; Neef, Julia; Vojtěch, Oldřich; Burda, Hynek

    2008-01-01

    We demonstrate by means of simple, noninvasive methods (analysis of satellite images, field observations, and measuring “deer beds” in snow) that domestic cattle (n = 8,510 in 308 pastures) across the globe, and grazing and resting red and roe deer (n = 2,974 at 241 localities), align their body axes in roughly a north–south direction. Direct observations of roe deer revealed that animals orient their heads northward when grazing or resting. Amazingly, this ubiquitous phenomenon does not seem to have been noticed by herdsmen, ranchers, or hunters. Because wind and light conditions could be excluded as a common denominator determining the body axis orientation, magnetic alignment is the most parsimonious explanation. To test the hypothesis that cattle orient their body axes along the field lines of the Earth's magnetic field, we analyzed the body orientation of cattle from localities with high magnetic declination. Here, magnetic north was a better predictor than geographic north. This study reveals the magnetic alignment in large mammals based on statistically sufficient sample sizes. Our findings open horizons for the study of magnetoreception in general and are of potential significance for applied ethology (husbandry, animal welfare). They challenge neuroscientists and biophysics to explain the proximate mechanisms. PMID:18725629

  3. A Topologically-Informed Hyperstreamline Seeding Method for Alignment Tensor Fields.

    PubMed

    Fu, Fred; Abukhdeir, Nasser Mohieddin

    2015-03-01

    A topologically-informed hyperstreamline seeding method is presented for visualization of alignment tensor fields. The method is inspired by and applied to visualization of nematic liquid crystal (LC) orientation dynamics simulations. The method distributes hyperstreamlines along domain boundaries and edges of a nearest-neighbor graph whose vertices are degenerate regions of the alignment tensor field, which correspond to orientational defects in a nematic LC domain. This is accomplished without iteration while conforming to a user-specified spacing between hyperstreamlines and avoids possible failure modes associated with hyperstreamline integration in the vicinity of degeneracies in alignment (orientational defects). It is shown that the presented seeding method enables automated hyperstreamline-based visualization of a broad range of alignment tensor fields which enhances the ability of researchers to interpret these fields and provides an alternative to using glyph-based techniques. PMID:26357072

  4. Nanofiber alignment and direction of mechanical strain affect the ECM production of human ACL fibroblast.

    PubMed

    Lee, Chang Hun; Shin, Ho Joon; Cho, In Hee; Kang, Young-Mi; Kim, In Ae; Park, Ki-Dong; Shin, Jung-Woog

    2005-04-01

    The effects of fiber alignment and direction of mechanical stimuli on the ECM generation of human ligament fibroblast (HLF) were assessed. The nanofiber matrix was fabricated using electrospinning technique. To align the nanofibers, a rotating target was used. The HLFs on the aligned nanofibers were spindle-shaped and oriented in the direction of the nanofibers. The degree of ECM production was evaluated by comparing the amount of collagen on aligned and randomly oriented structures. Significantly more collagen was synthesized on aligned nanofiber sheets, although the proliferation did not differ significantly. This suggests that the spindle-shape observable in intact ligaments is preferable in producing ECM. To evaluate the effect of strain direction on the ECM production, HLFs were seeded on parallel aligned, vertically aligned to the strain direction, and randomly oriented nanofiber sheets attached to Flexcell plates. After a 48-h culture, 5% uniaxial strain was applied for 24h at a frequency of 12 cycles/min. The amounts of collagen produced were measured 2 days after halting the strain application. The HLFs were more sensitive to strain in the longitudinal direction. In conclusion, the aligned nanofiber scaffold used in this study constitutes a promising base material for tissue-engineered ligament in that it provides more preferable biomimetic structure, along with proper mechanical environment. PMID:15475056

  5. Homogeneous alignment of nematic liquid crystals by ion beam etched surfaces

    NASA Technical Reports Server (NTRS)

    Wintucky, E. G.; Mahmood, R.; Johnson, D. L.

    1979-01-01

    A wide range of the ion beam etch parameters are capable of producing uniform homogeneous alignment of nematic liquid crystals on SiO2 films. The alignment surfaces were generated by obliquely incident argon ions; a smaller range of ion beam parameters was also investigated with ZrO2 films and found suitable for homogeneous alignment. Extinction ratios were very high, and twist and tilt-bias angles were very small. The SEM results indicate a parallel oriented surface structure on the ion beam etched surfaces which may determine alignment.

  6. Null test fourier domain alignment technique for phase-shifting point diffraction interferometer

    DOEpatents

    Naulleau, Patrick; Goldberg, Kenneth Alan

    2000-01-01

    Alignment technique for calibrating a phase-shifting point diffraction interferometer involves three independent steps where the first two steps independently align the image points and pinholes in rotation and separation to a fixed reference coordinate system, e.g, CCD. Once the two sub-elements have been properly aligned to the reference in two parameters (separation and orientation), the third step is to align the two sub-element coordinate systems to each other in the two remaining parameters (x,y) using standard methods of locating the pinholes relative to some easy to find reference point.

  7. Assessment of crystal quality and unit cell orientation in epitaxial Cu₂ZnSnSe₄ layers using polarized Raman scattering.

    PubMed

    Krämmer, Christoph; Lang, Mario; Redinger, Alex; Sachs, Johannes; Gao, Chao; Kalt, Heinz; Siebentritt, Susanne; Hetterich, Michael

    2014-11-17

    We use polarization-resolved Raman spectroscopy to assess the crystal quality of epitaxial kesterite layers. It is demonstrated for the example of epitaxial Cu₂ZnSnSe₄ layers on GaAs(001) that "standing" and "lying" kesterite unit cell orientations (c'-axis parallel / perpendicular to the growth direction) can be distinguished by the application of Raman tensor analysis. From the appearance of characteristic intensity oscillations when the sample is rotated one can distinguish polycrystalline and epitaxial layers. The method can be transferred to kesterite layers oriented in any crystal direction and can shed light on the growth of such layers in general. PMID:25402065

  8. Drive alignment pays maintenance dividends

    SciTech Connect

    Fedder, R.

    2008-12-15

    Proper alignment of the motor and gear drive on conveying and processing equipment will result in longer bearing and coupling life, along with lower maintenance costs. Selecting an alignment free drive package instead of a traditional foot mounted drive and motor is a major advancement toward these goals. 4 photos.

  9. Lexical alignment in triadic communication

    PubMed Central

    Foltz, Anouschka; Gaspers, Judith; Thiele, Kristina; Stenneken, Prisca; Cimiano, Philipp

    2015-01-01

    Lexical alignment refers to the adoption of one’s interlocutor’s lexical items. Accounts of the mechanisms underlying such lexical alignment differ (among other aspects) in the role assigned to addressee-centered behavior. In this study, we used a triadic communicative situation to test which factors may modulate the extent to which participants’ lexical alignment reflects addressee-centered behavior. Pairs of naïve participants played a picture matching game and received information about the order in which pictures were to be matched from a voice over headphones. On critical trials, participants did or did not hear a name for the picture to be matched next over headphones. Importantly, when the voice over headphones provided a name, it did not match the name that the interlocutor had previously used to describe the object. Participants overwhelmingly used the word that the voice over headphones provided. This result points to non-addressee-centered behavior and is discussed in terms of disrupting alignment with the interlocutor as well as in terms of establishing alignment with the voice over headphones. In addition, the type of picture (line drawing vs. tangram shape) independently modulated lexical alignment, such that participants showed more lexical alignment to their interlocutor for (more ambiguous) tangram shapes compared to line drawings. Overall, the results point to a rather large role for non-addressee-centered behavior during lexical alignment. PMID:25762955

  10. Semiautomated improvement of RNA alignments

    PubMed Central

    Andersen, Ebbe S.; Lind-Thomsen, Allan; Knudsen, Bjarne; Kristensen, Susie E.; Havgaard, Jakob H.; Torarinsson, Elfar; Larsen, Niels; Zwieb, Christian; Sestoft, Peter; Kjems, Jørgen; Gorodkin, Jan

    2007-01-01

    We have developed a semiautomated RNA sequence editor (SARSE) that integrates tools for analyzing RNA alignments. The editor highlights different properties of the alignment by color, and its integrated analysis tools prevent the introduction of errors when doing alignment editing. SARSE readily connects to external tools to provide a flexible semiautomatic editing environment. A new method, Pcluster, is introduced for dividing the sequences of an RNA alignment into subgroups with secondary structure differences. Pcluster was used to evaluate 574 seed alignments obtained from the Rfam database and we identified 71 alignments with significant prediction of inconsistent base pairs and 102 alignments with significant prediction of novel base pairs. Four RNA families were used to illustrate how SARSE can be used to manually or automatically correct the inconsistent base pairs detected by Pcluster: the mir-399 RNA, vertebrate telomase RNA (vert-TR), bacterial transfer-messenger RNA (tmRNA), and the signal recognition particle (SRP) RNA. The general use of the method is illustrated by the ability to accommodate pseudoknots and handle even large and divergent RNA families. The open architecture of the SARSE editor makes it a flexible tool to improve all RNA alignments with relatively little human intervention. Online documentation and software are available at http://sarse.ku.dk. PMID:17804647

  11. Well-pump alignment system

    DOEpatents

    Drumheller, Douglas S.

    1998-01-01

    An improved well-pump for geothermal wells, an alignment system for a well-pump, and to a method for aligning a rotor and stator within a well-pump, wherein the well-pump has a whistle assembly formed at a bottom portion thereof, such that variations in the frequency of the whistle, indicating misalignment, may be monitored during pumping.

  12. On the alignment of quasars

    NASA Astrophysics Data System (ADS)

    Zhu, X.-F.

    1986-06-01

    Taking the two Savage-Bolton 5 deg x 5 deg regions of optical quasar patrol as samples, a systematic analysis of the number of aligned quasars was made and compared with the random data generated by Monte Carlo method. The statistical result is that, at least for these two samples, there is no clear evidence for alignment.

  13. On the alignment of quasars

    NASA Astrophysics Data System (ADS)

    Zhu, Xing-fen

    1986-06-01

    Taking the two Savage-Bolton 5° × 5° regions of optical quasar patrol as samples, I made a systematic analysis of the number of aligned quasars and compared with the random data generated by Monte Carlo method. The statistical result is that, at least for these two samples, there is no clear evidence for alignment.

  14. CATO: The Clone Alignment Tool.

    PubMed

    Henstock, Peter V; LaPan, Peter

    2016-01-01

    High-throughput cloning efforts produce large numbers of sequences that need to be aligned, edited, compared with reference sequences, and organized as files and selected clones. Different pieces of software are typically required to perform each of these tasks. We have designed a single piece of software, CATO, the Clone Alignment Tool, that allows a user to align, evaluate, edit, and select clone sequences based on comparisons to reference sequences. The input and output are designed to be compatible with standard data formats, and thus suitable for integration into a clone processing pipeline. CATO provides both sequence alignment and visualizations to facilitate the analysis of cloning experiments. The alignment algorithm matches each of the relevant candidate sequences against each reference sequence. The visualization portion displays three levels of matching: 1) a top-level summary of the top candidate sequences aligned to each reference sequence, 2) a focused alignment view with the nucleotides of matched sequences displayed against one reference sequence, and 3) a pair-wise alignment of a single reference and candidate sequence pair. Users can select the minimum matching criteria for valid clones, edit or swap reference sequences, and export the results to a summary file as part of the high-throughput cloning workflow. PMID:27459605

  15. CATO: The Clone Alignment Tool

    PubMed Central

    Henstock, Peter V.; LaPan, Peter

    2016-01-01

    High-throughput cloning efforts produce large numbers of sequences that need to be aligned, edited, compared with reference sequences, and organized as files and selected clones. Different pieces of software are typically required to perform each of these tasks. We have designed a single piece of software, CATO, the Clone Alignment Tool, that allows a user to align, evaluate, edit, and select clone sequences based on comparisons to reference sequences. The input and output are designed to be compatible with standard data formats, and thus suitable for integration into a clone processing pipeline. CATO provides both sequence alignment and visualizations to facilitate the analysis of cloning experiments. The alignment algorithm matches each of the relevant candidate sequences against each reference sequence. The visualization portion displays three levels of matching: 1) a top-level summary of the top candidate sequences aligned to each reference sequence, 2) a focused alignment view with the nucleotides of matched sequences displayed against one reference sequence, and 3) a pair-wise alignment of a single reference and candidate sequence pair. Users can select the minimum matching criteria for valid clones, edit or swap reference sequences, and export the results to a summary file as part of the high-throughput cloning workflow. PMID:27459605

  16. Space Mirror Alignment System

    NASA Technical Reports Server (NTRS)

    Jau, Bruno M.; McKinney, Colin; Smythe, Robert F.; Palmer, Dean L.

    2011-01-01

    An optical alignment mirror mechanism (AMM) has been developed with angular positioning accuracy of +/-0.2 arcsec. This requires the mirror s linear positioning actuators to have positioning resolutions of +/-112 nm to enable the mirror to meet the angular tip/tilt accuracy requirement. Demonstrated capabilities are 0.1 arc-sec angular mirror positioning accuracy, which translates into linear positioning resolutions at the actuator of 50 nm. The mechanism consists of a structure with sets of cross-directional flexures that enable the mirror s tip and tilt motion, a mirror with its kinematic mount, and two linear actuators. An actuator comprises a brushless DC motor, a linear ball screw, and a piezoelectric brake that holds the mirror s position while the unit is unpowered. An interferometric linear position sensor senses the actuator s position. The AMMs were developed for an Astrometric Beam Combiner (ABC) optical bench, which is part of an interferometer development. Custom electronics were also developed to accommodate the presence of multiple AMMs within the ABC and provide a compact, all-in-one solution to power and control the AMMs.

  17. Alignment positioning mechanism

    NASA Technical Reports Server (NTRS)

    Fantasia, Peter M. (Inventor)

    1991-01-01

    An alignment positioning mechanism for correcting and compensating for misalignment of structures to be coupled is disclosed. The mechanism comprises a power screw with a base portion and a threaded shank portion. A mounting fixture is provided for rigidly coupling said base portion to the mounting interface of a supporting structure with the axis of the screw perpendicular thereto. A traveling ball nut threaded on the power screw is formed with an external annular arcuate surface configured in the form of a spherical segment and enclosed by a ball nut housing with a conforming arcuate surface for permitting gimballed motion thereon. The ball nut housing is provided with a mounting surface which is positionable in cooperable engagement with the mounting interface of a primary structure to be coupled to the supporting structure. Cooperative means are provided on the ball nut and ball nut housing, respectively, for positioning the ball nut and ball nut housing in relative gimballed position within a predetermined range of relative angular relationship whereby severe structural stresses due to unequal loadings and undesirable bending moments on the mechanism are avoided.

  18. Pd(0.213)Cd(0.787) and Pd(0.235)Cd(0.765) structures: their long c axis and composite crystals, chemical twinning, and atomic site preferences.

    PubMed

    Schmidt, Joshua Teal; Lee, Stephen; Fredrickson, Daniel C; Conrad, Matthias; Sun, Junliang; Harbrecht, Bernd

    2007-01-01

    We present single-crystal studies of Pd(0.213)Cd(0.787) and Pd(0.235)Cd(0.765), synchrotron powder studies of Pd(1-x)Cd(x), 0.755> or =x> or =0.800, and LDA-DFT and extended Hückel (eH) calculations on these or related phases. The two single-crystal structures have a, b, and c axis lengths of 9.9013(7), 14.0033(10), 37.063(24) and 9.9251(3), 14.0212(7), 60.181(3) A, respectively and they crystallize in the space groups Ccme and F2mm, respectively (solved as (3+1)-dimensional crystals their most convenient superspace group is Xmmm(00gamma)s00). The structures have two different structural components each with their own separate axis parameters. Powder data shows that the ratio of these separate axes (S/L) varies from 1.615 to 1.64, values near the golden mean (1.618). For Pd(0.213)Cd(0.787), different Pd and Cd site occupancies lead to variation in the R factor from 2.6-3.6 %. The site occupancy pattern with the lowest R factor (among the 26 820 variants studied) is the exact site occupancy pattern predicted by LDA-DFT parameterized eH Mulliken charge populations. The phases can be understood through a chemical twinning principle found in gamma-brass, the parent structure for the above phases (a relation with the MgCu(2) Laves phase is also noted). This twinning principle can be used to account for Cd and Pd site preferences. At the same time there is a clean separation among the Cd and Pd atoms for the two separate chain types at height b=0 and 1/2. These results indicate that Cd:Pd stoichiometry plays a role in phase stability. PMID:17091515

  19. Highly Ordered 1D Fullerene Crystals for Concurrent Control of Macroscopic Cellular Orientation and Differentiation toward Large-Scale Tissue Engineering.

    PubMed

    Minami, Kosuke; Kasuya, Yuki; Yamazaki, Tomohiko; Ji, Qingmin; Nakanishi, Waka; Hill, Jonathan P; Sakai, Hideki; Ariga, Katsuhiko

    2015-07-15

    A highly aligned 1D fullerene whisker (FW) scaffold in a centimeter area is fabricated by interfacial alignment. The resulting aligned FW scaffold enables concurrent control over cellular orientation and differentiation to muscle cells. This aligned FW scaffold is made by a facile method, and hence the substrate is a promising alternative to other cell scaffolds for tissue engineering. PMID:26033774

  20. Alignment-Annotator web server: rendering and annotating sequence alignments

    PubMed Central

    Gille, Christoph; Fähling, Michael; Weyand, Birgit; Wieland, Thomas; Gille, Andreas

    2014-01-01

    Alignment-Annotator is a novel web service designed to generate interactive views of annotated nucleotide and amino acid sequence alignments (i) de novo and (ii) embedded in other software. All computations are performed at server side. Interactivity is implemented in HTML5, a language native to web browsers. The alignment is initially displayed using default settings and can be modified with the graphical user interfaces. For example, individual sequences can be reordered or deleted using drag and drop, amino acid color code schemes can be applied and annotations can be added. Annotations can be made manually or imported (BioDAS servers, the UniProt, the Catalytic Site Atlas and the PDB). Some edits take immediate effect while others require server interaction and may take a few seconds to execute. The final alignment document can be downloaded as a zip-archive containing the HTML files. Because of the use of HTML the resulting interactive alignment can be viewed on any platform including Windows, Mac OS X, Linux, Android and iOS in any standard web browser. Importantly, no plugins nor Java are required and therefore Alignment-Anotator represents the first interactive browser-based alignment visualization. Availability: http://www.bioinformatics.org/strap/aa/ and http://strap.charite.de/aa/. PMID:24813445

  1. Recrystallization fabrics of sheared quartz veins with a strong pre-existing crystallographic preferred orientation from a seismogenic shear zone

    NASA Astrophysics Data System (ADS)

    Price, Nancy A.; Song, Won Joon; Johnson, Scott E.; Gerbi, Christopher C.; Beane, Rachel J.; West, David P.

    2016-07-01

    Microstructural investigations were carried out on quartz veins in schist, protomylonite, and mylonite samples from an ancient seismogenic strike-slip shear zone (Sandhill Corner shear zone, Norumbega fault system, Maine, USA). We interpret complexities in the microstructural record to show that: (1) pre-existing crystallographic preferred orientations (CPO) in the host rock may persist in the new CPO patterns of the shear zone and (2) the inner and outer parts of the shear zone followed diverging paths of fabric development. The host rocks bounding the shear zone contain asymmetrically-folded quartz veins with a strong CPO. These veins are increasingly deformed and recrystallized with proximity to the shear zone core. Matrix-accommodated rotation and recrystallization may position an inherited c-axis maximum in an orientation coincident with rhomb < a > or basal < a > slip. This inherited CPO likely persists in the shear zone fabric as a higher concentration of poles in one hemisphere of the c-axis pole figure, leading to asymmetric crossed girdle or paired maxima c-axis patterns about the foliation plane. Three observed quartz grain types indicate a general trend of localization with decreasing temperature: (1) large (> 100 μm), low aspect ratio (<~5) and (2) high aspect ratio (~ 5-20) grains overprinted by (3) smaller (<~80 μm), low aspect ratio (<~4) grains through subgrain rotation-dominated recrystallization. In the outer shear zone, subgrain rotation recrystallization led to a well-developed c-axis crossed girdle pattern. In the inner shear zone, the larger grains are completely overprinted by smaller grains, but the CPO patterns are relatively poorly developed and are associated with distinctively different misorientation angle histogram profiles ("flat" neighbor-pair profile with similar number fraction for angles from 10 to 90°). This may reflect the preferential activation of grain size sensitive deformation processes in the inner-most part of the

  2. Testing the tidal alignment model of galaxy intrinsic alignment

    SciTech Connect

    Blazek, Jonathan; Seljak, Uroš; McQuinn, Matthew E-mail: mmcquinn@berkeley.edu

    2011-05-01

    Weak gravitational lensing has become a powerful probe of large-scale structure and cosmological parameters. Precision weak lensing measurements require an understanding of the intrinsic alignment of galaxy ellipticities, which can in turn inform models of galaxy formation. It is hypothesized that elliptical galaxies align with the background tidal field and that this alignment mechanism dominates the correlation between ellipticities on cosmological scales (in the absence of lensing). We use recent large-scale structure measurements from the Sloan Digital Sky Survey to test this picture with several statistics: (1) the correlation between ellipticity and galaxy overdensity, w{sub g+}; (2) the intrinsic alignment auto-correlation functions; (3) the correlation functions of curl-free, E, and divergence-free, B, modes, the latter of which is zero in the linear tidal alignment theory; (4) the alignment correlation function, w{sub g}(r{sub p},θ), a recently developed statistic that generalizes the galaxy correlation function to account for the angle between the galaxy separation vector and the principle axis of ellipticity. We show that recent measurements are largely consistent with the tidal alignment model and discuss dependence on galaxy luminosity. In addition, we show that at linear order the tidal alignment model predicts that the angular dependence of w{sub g}(r{sub p},θ) is simply w{sub g+}(r{sub p})cos (2θ) and that this dependence is consistent with recent measurements. We also study how stochastic nonlinear contributions to galaxy ellipticity impact these statistics. We find that a significant fraction of the observed LRG ellipticity can be explained by alignment with the tidal field on scales ∼> 10 \\hMpc. These considerations are relevant to galaxy formation and evolution.

  3. Birefringence imaging and orientation of laser patterned β-BaB2O4 crystals with bending and curved shapes in glass

    NASA Astrophysics Data System (ADS)

    Ogawa, Kazuki; Honma, Tsuyoshi; Komatsu, Takayuki

    2013-11-01

    Nonlinear optical β-BaB2O4 crystals (β-BBO) with bending and curved shapes were patterned at the surface of 8Sm2O3-42BaO-50B2O3 glass by laser irradiations (Yb:YVO4 laser with a wavelength of 1080 nm, power of 0.8 W, and scanning speed of 4 μm/s), and the orientation state of β-BBO crystals was examined from the birefringence imaging obtained by polarization optical microscope (POM) observations. The formation (crystallization) of β-BBO crystals follows along laser scanning direction even if the laser scanning direction changes at a certain point within the bending angle of 60°. The birefringence images indicate that the formation of highly c-axis oriented β-BBO crystals follows along laser scanning direction even if the laser scanning direction changes, and in particular the direction of the c-axis of β-BBO crystals changes gradually at the bending point. The model for the orientation of the c-axis of β-BBO near the bending point is proposed. The present study proposes that the laser-induced crystallization opens a new door for the science and technology in crystal growth engineering.

  4. Liquid crystal alignment induced by micron-scale patterned surfaces.

    PubMed

    Willman, E; Seddon, L; Osman, M; Bulak, A; James, R; Day, S E; Fernandez, F A

    2014-05-01

    Induced bulk orientation of nematic liquid crystal in contact with micron-scale patterned surfaces is investigated using the Landau-de Gennes theory by means of three-dimensional simulations. The effect of the size and spacing of square cross-sectional well and post patterns is investigated and shown to influence the orientation of the liquid crystal bulk, far removed from the surface. Additionally, the effective anchoring strength of the induced alignment is estimated using a modified version of the torque balance method. Both azimuthal and zenithal multistability are shown to exist within unique ranges of feature sizes. PMID:25353809

  5. Magnetic Fractionation and Alignment of Single Wall Carbon Nanotubes

    NASA Astrophysics Data System (ADS)

    Islam, M. F.; Milkie, D. E.; Yodh, A. G.; Kikkawa, J. M.

    2004-03-01

    We study mechanisms of single wall carbon nanotube (SWNT) alignment in a magnetic field. Through magnetic fractionation, we create SWNT suspensions with varying quantities of magnetic catalyst particles. The degree of tube alignment in magnetic fields up to 9 Tesla is quantified using polarized optical absorbance anisotropy. Continuous measurements of the nematic order parameter of these suspensions in variable magnetic fields provides a way to identify the origin of magnetic torques giving rise to nanotube alignment. Initial data suggests a transition from catalyst-driven to nanotube-anisotropy driven orientation as the catalyst fraction is reduced. We relate these results to observations of nanotube aggregation. This work has been supported by NSF through DMR-0203378, DMR-079909 and DGE-0221664, NASA through NAG8-2172, DARPA/ONR through N00014-01-1-0831, and SENS.

  6. GATA: A graphic alignment tool for comparative sequenceanalysis

    SciTech Connect

    Nix, David A.; Eisen, Michael B.

    2005-01-01

    Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved sequence elements are collinear. This assumption appears valid when comparing orthologous protein coding sequences. Functional constraints on proteins provide strong selective pressure against sequence inversions, and minimize sequence duplications and feature shuffling. For non-coding sequences this collinearity assumption is often invalid. For example, enhancers contain clusters of transcription factor binding sites that change in number, orientation, and spacing during evolution yet the enhancer retains its activity. Dotplot analysis is often used to estimate non-coding sequence relatedness. Yet dot plots do not actually align sequences and thus cannot account well for base insertions or deletions. Moreover, they lack an adequate statistical framework for comparing sequence relatedness and are limited to pairwise comparisons. Lastly, dot plots and dynamic programming text outputs fail to provide an intuitive means for visualizing DNA alignments.

  7. Aligned carbon nanotubes: from controlled synthesis to electronic applications.

    PubMed

    Liu, Bilu; Wang, Chuan; Liu, Jia; Che, Yuchi; Zhou, Chongwu

    2013-10-21

    Single-wall carbon nanotubes (SWNTs) possess superior geometrical, electronic, chemical, thermal, and mechanical properties and are very attractive for applications in electronic devices and circuits. To make this a reality, the nanotube orientation, density, diameter, electronic property, and even chirality should be well controlled. This Feature article focuses on recent achievements researchers have made on the controlled growth of horizontally aligned SWNTs and SWNT arrays on substrates and their electronic applications. Principles and strategies to control the morphology, structure, and properties of SWNTs are reviewed in detail. Furthermore, electrical properties of field-effect transistors fabricated on both individual SWNTs and aligned SWNT arrays are discussed. State-of-the-art electronic devices and circuits based on aligned SWNTs and SWNT arrays are also highlighted. PMID:23969970

  8. Uniaxial pressure effect of Metal-Insulator Transition (TMI) in oriented Sm0.55(Sr0.5Ca0.5)0.45MnO3

    NASA Astrophysics Data System (ADS)

    Arumugam, Sonachalam; Mohan Radheep, D.; Sarkar, P.; Mandal, P.; Arumugam Team; Prabhat Mandal Collaboration

    2013-06-01

    Perovskite type manganites R1 - xAxMnO3 (R: rare earth ions, A: alkaline earth ions) exhibit various fundamental phenomena like colossal magnetoresistance (CMR), phase separation, and first-order ferromagnetic (FM) to paramagnetic (PM) phase transition etc. Similar to CMR, piezoresistance (PR), the change in electrical resistance in response to external pressure, can also be important parameter for various technological applications. Several studies shows that the order of phase transition can be changed either by applying external perturbations like magnetic field, pressure (P) , etc. or internally like doping etc. SSCMO single crystal was grown using floating zone technique and the quality was carefully checked and aligned along the c axis as well as ab-plane. We have investigated the effect of uniaxial pressure (P) on electrical resistivity along the ab-plane and c - axis in a single crystal of SSCMO. A huge PR ~107 % at P = 90 MPa and a remarkable increase (~79 K/GPa) of TMI have been observed with the application of P || c - axis, while TMI decreases at the rate of ~77 K/GPa for P⊥ c axis. These values of PR and dTMI /dP are much larger than those observed in other perovskite and bilayer manganites. Hence, these materials may be used for various technological applications. The authors SA and DMR wishes to thank DST, UGC and CSIR-SRF scheme (India) for the financial support to carry out the research work.

  9. Advanced Mask Aligner Lithography (AMALITH)

    NASA Astrophysics Data System (ADS)

    Voelkel, Reinhard; Vogler, Uwe; Bramati, Arianna

    2015-03-01

    Mask aligner lithography is very attractive for less-critical lithography layers and is widely used for LED, display, CMOS image sensor, micro-fluidics and MEMS manufacturing. Mask aligner lithography is also a preferred choice the semiconductor back-end for 3D-IC, TSV interconnects, advanced packaging (AdP) and wafer-level-packaging (WLP). Mask aligner lithography is a mature technique based on shadow printing and has not much changed since the 1980s. In shadow printing lithography a geometric pattern is transferred by free-space propagation from a photomask to a photosensitive layer on a wafer. The inherent simplicity of the pattern transfer offers ease of operation, low maintenance, moderate capital expenditure, high wafers-per-hour (WPH) throughput, and attractive cost-of-ownership (COO). Advanced mask aligner lithography (AMALITH) comprises different measures to improve shadow printing lithography beyond current limits. The key enabling technology for AMALITH is a novel light integrator systems, referred to as MO Exposure Optics® (MOEO). MOEO allows to fully control and shape the properties of the illumination light in a mask aligner. Full control is the base for accurate simulation and optimization of the shadow printing process (computational lithography). Now photolithography enhancement techniques like customized illumination, optical proximity correction (OPC), phase masks (AAPSM), half-tone lithography and Talbot lithography could be used in mask aligner lithography. We summarize the recent progress in advanced mask aligner lithography (AMALITH) and discuss possible measures to further improve shadow printing lithography.

  10. Aligning for Innovation - Alignment Strategy to Drive Innovation

    NASA Technical Reports Server (NTRS)

    Johnson, Hurel; Teltschik, David; Bussey, Horace, Jr.; Moy, James

    2010-01-01

    With the sudden need for innovation that will help the country achieve its long-term space exploration objectives, the question of whether NASA is aligned effectively to drive the innovation that it so desperately needs to take space exploration to the next level should be entertained. Authors such as Robert Kaplan and David North have noted that companies that use a formal system for implementing strategy consistently outperform their peers. They have outlined a six-stage management systems model for implementing strategy, which includes the aligning of the organization towards its objectives. This involves the alignment of the organization from the top down. This presentation will explore the impacts of existing U.S. industrial policy on technological innovation; assess the current NASA organizational alignment and its impacts on driving technological innovation; and finally suggest an alternative approach that may drive the innovation needed to take the world to the next level of space exploration, with NASA truly leading the way.

  11. MAGSAT: Vector magnetometer absolute sensor alignment determination

    NASA Technical Reports Server (NTRS)

    Acuna, M. H.

    1981-01-01

    A procedure is described for accurately determining the absolute alignment of the magnetic axes of a triaxial magnetometer sensor with respect to an external, fixed, reference coordinate system. The method does not require that the magnetic field vector orientation, as generated by a triaxial calibration coil system, be known to better than a few degrees from its true position, and minimizes the number of positions through which a sensor assembly must be rotated to obtain a solution. Computer simulations show that accuracies of better than 0.4 seconds of arc can be achieved under typical test conditions associated with existing magnetic test facilities. The basic approach is similar in nature to that presented by McPherron and Snare (1978) except that only three sensor positions are required and the system of equations to be solved is considerably simplified. Applications of the method to the case of the MAGSAT Vector Magnetometer are presented and the problems encountered discussed.

  12. Orienting hypnosis.

    PubMed

    Hope, Anna E; Sugarman, Laurence I

    2015-01-01

    This article presents a new frame for understanding hypnosis and its clinical applications. Despite great potential to transform health and care, hypnosis research and clinical integration is impaired in part by centuries of misrepresentation and ignorance about its demonstrated efficacy. The authors contend that advances in the field are primarily encumbered by the lack of distinct boundaries and definitions. Here, hypnosis, trance, and mind are all redefined and grounded in biological, neurological, and psychological phenomena. Solutions are proposed for boundary and language problems associated with hypnosis. The biological role of novelty stimulating an orienting response that, in turn, potentiates systemic plasticity forms the basis for trance. Hypnosis is merely the skill set that perpetuates and influences trance. This formulation meshes with many aspects of Milton Erickson's legacy and Ernest Rossi's recent theory of mind and health. Implications of this hypothesis for clinical skills, professional training, and research are discussed. PMID:25928677

  13. Fusion bonding and alignment fixture

    DOEpatents

    Ackler, Harold D.; Swierkowski, Stefan P.; Tarte, Lisa A.; Hicks, Randall K.

    2000-01-01

    An improved vacuum fusion bonding structure and process for aligned bonding of large area glass plates, patterned with microchannels and access holes and slots, for elevated glass fusion temperatures. Vacuum pumpout of all the components is through the bottom platform which yields an untouched, defect free top surface which greatly improves optical access through this smooth surface. Also, a completely non-adherent interlayer, such as graphite, with alignment and location features is located between the main steel platform and the glass plate pair, which makes large improvements in quality, yield, and ease of use, and enables aligned bonding of very large glass structures.

  14. Adaptive control of molecular alignment

    SciTech Connect

    Horn, C.; Wollenhaupt, M.; Krug, M.; Baumert, T.; Nalda, R. de; Banares, L.

    2006-03-15

    We demonstrate control on nonadiabatic molecular alignment by using a spectrally phase-shaped laser pulse. An evolutionary algorithm in a closed feedback loop has been used in order to find pulse shapes that maximize a given effect. In particular, this scheme has been applied to the optimization of total alignment, and to the control of the temporal structure of the alignment transient within a revival. Asymmetric temporal pulse shapes have been found to be very effective for the latter and have been studied separately in a single-parameter control scheme. Our experimental results are supported by numerical simulations.

  15. High-harmonic generation in aligned water molecules

    NASA Astrophysics Data System (ADS)

    Wang, Song; Devin, Julien; Hoffmann, Matthias; Cryan, James; Kaldun, Andreas; Bucksbaum, Philip

    2016-05-01

    In recent years, the use of high harmonic generation (HHG) in aligned molecular vapors has become a powerful tool to study ultrafast dynamics of electronic and nuclear wave packets. In our new experimental setup, we are able to orient H2 O and D2 O molecules using a single cycle terahertz (THz) pulse. Aligning water is especially interesting as the highest occupied molecular orbital (HOMO) of water contains a node in the xz plane of the molecular frame, allowing us to perform HHG from second highest occupied molecular orbital (HOMO-1) only, by setting the polarization of the fundamental laser along the z-axis of the aligned water molecules. We are particularly interested in the HOMO-1 state, as there is fast motion of the H-O-H angle leading to sub-wavelength dynamics. On this poster we present our all-optical alignment setup where HHG and single-cycle THz generation take place in high-vacuum, where measurements with arbitrary polarization angles between the two are possible. In addition, we discuss the effects of the molecular orientation on HHG, including symmetry breaking that could produce even harmonics and isotope effects between H2 O and D2 O due to different vibrational energies. This work was supported by the U.S. Department of Energy, Office of Science, Basic Energy Sciences, Chemical Sciences, Geosciences, and Biosciences Division.

  16. Shear adhesion strength of aligned electrospun nanofibers.

    PubMed

    Najem, Johnny F; Wong, Shing-Chung; Ji, Guang

    2014-09-01

    Inspiration from nature such as insects' foot hairs motivates scientists to fabricate nanoscale cylindrical solids that allow tens of millions of contact points per unit area with material substrates. In this paper, we present a simple yet robust method for fabricating directionally sensitive shear adhesive laminates. By using aligned electrospun nylon-6, we create dry adhesives, as a succession of our previous work on measuring adhesion energies between two single free-standing electrospun polymer fibers in cross-cylinder geometry, randomly oriented membranes and substrate, and peel forces between aligned fibers and substrate. The synthetic aligned cylindrical solids in this study are electrically insulating and show a maximal Mode II shear adhesion strength of 27 N/cm(2) on a glass slide. This measured value, for the purpose of comparison, is 270% of that reported from gecko feet. The Mode II shear adhesion strength, based on a commonly known "dead-weight" test, is 97-fold greater than the Mode I (normal) adhesion strength of the same. The data indicate a strong shear binding on and easy normal lifting off. Anisotropic adhesion (Mode II/Mode I) is pronounced. The size and surface boundary effects, crystallinity, and bending stiffness of fibers are used to understand these electrospun nanofibers, which vastly differ from otherwise known adhesive technologies. The anisotropic strength distribution is attributed to a decreasing fiber diameter and an optimized laminate thickness, which, in turn, influences the bending stiffness and solid-state "wettability" of points of contact between nanofibers and surface asperities. PMID:25105533

  17. Multiscale field-aligned current analyzer

    NASA Astrophysics Data System (ADS)

    Bunescu, C.; Marghitu, O.; Constantinescu, D.; Narita, Y.; Vogt, J.; Blǎgǎu, A.

    2015-11-01

    The magnetosphere-ionosphere coupling is achieved, essentially, by a superposition of quasi-stationary and time-dependent field-aligned currents (FACs), over a broad range of spatial and temporal scales. The planarity of the FAC structures observed by satellite data and the orientation of the planar FAC sheets can be investigated by the well-established minimum variance analysis (MVA) of the magnetic perturbation. However, such investigations are often constrained to a predefined time window, i.e., to a specific scale of the FAC. The multiscale field-aligned current analyzer, introduced here, relies on performing MVA continuously and over a range of scales by varying the width of the analyzing window, appropriate for the complexity of the magnetic field signatures above the auroral oval. The proposed technique provides multiscale information on the planarity and orientation of the observed FACs. A new approach, based on the derivative of the largest eigenvalue of the magnetic variance matrix with respect to the length of the analysis window, makes possible the inference of the current structures' location (center) and scale (thickness). The capabilities of the FAC analyzer are explored analytically for the magnetic field profile of the Harris sheet and tested on synthetic FAC structures with uniform current density and infinite or finite geometry in the cross-section plane of the FAC. The method is illustrated with data observed by the Cluster spacecraft on crossing the nightside auroral region, and the results are cross checked with the optical observations from the Time History of Events and Macroscale Interactions during Substorms ground network.

  18. Hydroxyapatite coatings with oriented nanoplate and nanorod arrays: Fabrication, morphology, cytocompatibility and osteogenic differentiation.

    PubMed

    Chen, Wei; Tian, Bo; Lei, Yong; Ke, Qin-Fei; Zhu, Zhen-An; Guo, Ya-Ping

    2016-10-01

    Hydroxyapatite (HA) crystals exhibit rod-like shape with c-axis orientation and plate-like shape with a(b)-axis orientation in vertebrate bones and tooth enamel surfaces, respectively. Herein, we report the synthesis of HA coatings with the oriented nanorod arrays (RHACs) and HA coatings with oriented nanoplate arrays (PHACs) by using bioglass coatings as sacrificial templates. After soaking in simulated body fluid (SBF) at 120°C, the bioglass coatings are hydrothermally converted into the HA coatings via a dissolution-precipitation reaction. If the Ca/P ratios in SBF are 2.50 and 1.25, the HA crystals on the coatings are oriented nanorod arrays and oriented nanoplate arrays, respectively. Moreover, the bioglass coatings are treated with SBF at 37°C, plate-like HA coatings with a low crystallinity (SHACs) are prepared. As compared with the Ti6Al4V and SHACs, the human bone marrow stromal cells (hBMSCs) on the RHACs and PHACs have better cell adhesion, spreading, proliferation and osteogenic differentiation because of their moderately hydrophilic surfaces and similar chemical composition, morphology and crystal orientation to human hard tissues. Notably, the morphologies of HA crystals have no obvious effects on cytocompatibility and osteogenic differentiation. Hence, the HA coatings with oriented nanoplate arrays or oriented nanorod arrays have a great potential for orthopedic applications. PMID:27287136

  19. Laser beam alignment apparatus and method

    DOEpatents

    Gruhn, Charles R.; Hammond, Robert B.

    1981-01-01

    The disclosure relates to an apparatus and method for laser beam alignment. Thermoelectric properties of a disc in a laser beam path are used to provide an indication of beam alignment and/or automatic laser alignment.

  20. Laser beam alignment apparatus and method

    DOEpatents

    Gruhn, C.R.; Hammond, R.B.

    The disclosure related to an apparatus and method for laser beam alignment. Thermoelectric properties of a disc in a laser beam path are used to provide an indication of beam alignment and/or automatic laser alignment.

  1. Theory of grain alignment in molecular clouds

    NASA Technical Reports Server (NTRS)

    Roberge, Wayne G.

    1993-01-01

    Research accomplishments are presented and include the following: (1) mathematical theory of grain alignment; (2) super-paramagnetic alignment of molecular cloud grains; and (3) theory of grain alignment by ambipolar diffusion.

  2. Protein structure alignment beyond spatial proximity

    PubMed Central

    Wang, Sheng; Ma, Jianzhu; Peng, Jian; Xu, Jinbo

    2013-01-01

    Protein structure alignment is a fundamental problem in computational structure biology. Many programs have been developed for automatic protein structure alignment, but most of them align two protein structures purely based upon geometric similarity without considering evolutionary and functional relationship. As such, these programs may generate structure alignments which are not very biologically meaningful from the evolutionary perspective. This paper presents a novel method DeepAlign for automatic pairwise protein structure alignment. DeepAlign aligns two protein structures using not only spatial proximity of equivalent residues (after rigid-body superposition), but also evolutionary relationship and hydrogen-bonding similarity. Experimental results show that DeepAlign can generate structure alignments much more consistent with manually-curated alignments than other automatic tools especially when proteins under consideration are remote homologs. These results imply that in addition to geometric similarity, evolutionary information and hydrogen-bonding similarity are essential to aligning two protein structures. PMID:23486213

  3. The Astronomical Orientation of Ancient Greek Temples

    PubMed Central

    Salt, Alun M.

    2009-01-01

    Despite its appearing to be a simple question to answer, there has been no consensus as to whether or not the alignments of ancient Greek temples reflect astronomical intentions. Here I present the results of a survey of archaic and classical Greek temples in Sicily and compare them with temples in Greece. Using a binomial test I show strong evidence that there is a preference for solar orientations. I then speculate that differences in alignment patterns between Sicily and Greece reflect differing pressures in the expression of ethnic identity. PMID:19936239

  4. Fixture for aligning motor assembly

    DOEpatents

    Shervington, Roger M.; Vaghani, Vallabh V.; Vanek, Laurence D.; Christensen, Scott A.

    2009-12-08

    An alignment fixture includes a rotor fixture, a stator fixture and a sensor system which measures a rotational displacement therebetween. The fixture precisely measures rotation of a generator stator assembly away from a NULL position referenced by a unique reference spline on the rotor shaft. By providing an adjustable location of the stator assembly within the housing, the magnetic axes within each generator shall be aligned to a predetermined and controlled tolerance between the generator interface mounting pin and the reference spline on the rotor shaft. Once magnetically aligned, each generator is essentially a line replaceable unit which may be readily mounted to any input of a multi-generator gearbox assembly with the assurance that the magnetic alignment will be within a predetermined tolerance.

  5. Well-pump alignment system

    DOEpatents

    Drumheller, D.S.

    1998-10-20

    An improved well-pump for geothermal wells, an alignment system for a well-pump, and to a method for aligning a rotor and stator within a well-pump are disclosed, wherein the well-pump has a whistle assembly formed at a bottom portion thereof, such that variations in the frequency of the whistle, indicating misalignment, may be monitored during pumping. 6 figs.

  6. Hybrid Alignment Induced by Asymmetric Photopolymerization of Liquid Crystal-Reactive Mesogen Composition between Two Plastic Substrates

    NASA Astrophysics Data System (ADS)

    Kim, Kyoung-Sun; Lee, Ji-Hoon

    2011-05-01

    A hybrid aligned liquid crystal layer was prepared between plastic substrates by the asymmetric photopolymerization of the reactive mesogen. The planar alignment of liquid crystal molecules was induced on the top substrate facing the UV light by the predominant photopolymerization at this substrate, whereas a homeotropic orientation was induced on the bottom substrate. The extinction ratio of the hybrid aligned samples vs the polymer concentration and the thickness of the liquid crystal layer was examined.

  7. Projection-Based Volume Alignment

    PubMed Central

    Yu, Lingbo; Snapp, Robert R.; Ruiz, Teresa; Radermacher, Michael

    2013-01-01

    When heterogeneous samples of macromolecular assemblies are being examined by 3D electron microscopy (3DEM), often multiple reconstructions are obtained. For example, subtomograms of individual particles can be acquired from tomography, or volumes of multiple 2D classes can be obtained by random conical tilt reconstruction. Of these, similar volumes can be averaged to achieve higher resolution. Volume alignment is an essential step before 3D classification and averaging. Here we present a projection-based volume alignment (PBVA) algorithm. We select a set of projections to represent the reference volume and align them to a second volume. Projection alignment is achieved by maximizing the cross-correlation function with respect to rotation and translation parameters. If data are missing, the cross-correlation functions are normalized accordingly. Accurate alignments are obtained by averaging and quadratic interpolation of the cross-correlation maximum. Comparisons of the computation time between PBVA and traditional 3D cross-correlation methods demonstrate that PBVA outperforms the traditional methods. Performance tests were carried out with different signal-to-noise ratios using modeled noise and with different percentages of missing data using a cryo-EM dataset. All tests show that the algorithm is robust and highly accurate. PBVA was applied to align the reconstructions of a subcomplex of the NADH: ubiquinone oxidoreductase (Complex I) from the yeast Yarrowia lipolytica, followed by classification and averaging. PMID:23410725

  8. Binocular collimation vs conditional alignment

    NASA Astrophysics Data System (ADS)

    Cook, William J.

    2012-10-01

    As binocular enthusiasts share their passion, topics related to collimation abound. Typically, we find how observers, armed only with a jeweler's screwdriver, can "perfectly collimate" his or her binocular, make it "spot on," or other verbiage of similar connotation. Unfortunately, what most are addressing is a form of pseudo-collimation I have referred to since the mid-1970s as "Conditional Alignment." Ignoring the importance of the mechanical axis (hinge) in the alignment process, this "condition," while having the potential to make alignment serviceable, or even outstanding—within a small range of IPD (Interpupillary Distance) settings relative to the user's spatial accommodation (the ability to accept small errors in parallelism of the optical axes)—may take the instrument farther from the 3-axis collimation conscientious manufacturers seek to implement. Becoming more optically savvy—and especially with so many mechanically inferior binoculars entering the marketplace— the consumer contemplating self-repair and alignment has a need to understand the difference between clinical, 3-axis "collimation" (meaning both optical axes are parallel with the axis of the hinge) and "conditional alignment," as differentiated in this paper. Furthermore, I believe there has been a long-standing need for the term "Conditional Alignment," or some equivalent, to be accepted as part of the vernacular of those who use binoculars extensively, whether for professional or recreational activities. Achieving that acceptance is the aim of this paper.

  9. Cooperative Ordering and Kinetics of Cellulose Nanocrystal Alignment in a Magnetic Field.

    PubMed

    De France, Kevin J; Yager, Kevin G; Hoare, Todd; Cranston, Emily D

    2016-08-01

    Cellulose nanocrystals (CNCs) are emerging nanomaterials that form chiral nematic liquid crystals above a critical concentration (C*) and additionally orient within electromagnetic fields. The control over CNC alignment is significant for materials processing and end use; to date, magnetic alignment has been demonstrated using only strong fields over extended or arbitrary time scales. This work investigates the effects of comparatively weak magnetic fields (0-1.2 T) and CNC concentration (1.65-8.25 wt %) on the kinetics and degree of CNC ordering using small-angle X-ray scattering. Interparticle spacing, correlation length, and orientation order parameters (η and S) increased with time and field strength following a sigmoidal profile. In a 1.2 T magnetic field for CNC suspensions above C*, partial alignment occurred in under 2 min followed by slower cooperative ordering to achieve nearly perfect alignment in under 200 min (S = -0.499 where S = -0.5 indicates perfect antialignment). At 0.56 T, nearly perfect alignment was also achieved, yet the ordering was 36% slower. Outside of a magnetic field, the order parameter plateaued at 52% alignment (S = -0.26) after 5 h, showcasing the drastic effects of relatively weak magnetic fields on CNC alignment. For suspensions below C*, no magnetic alignment was detected. PMID:27407001

  10. Electrospun fiber constructs for vocal fold tissue engineering: effects of alignment and elastomeric polypeptide coating

    PubMed Central

    Hughes, Lindsay A.; Gaston, Joel; McAlindon, Katherine; Woodhouse, Kimberly A.

    2014-01-01

    Vocal fold lamina propria extracellular matrix (ECM) is highly aligned and when injured, becomes disorganized with loss of the tissue’s critical biomechanical properties. This study examines the effects of electrospun fiber scaffold architecture and elastin-like polypeptide (ELP4) coating on human vocal fold fibroblast (HVFF) behavior for applications toward tissue engineering the vocal fold lamina propria. Electrospun Tecoflex™ scaffolds were made with aligned and unaligned fibers, and were characterized using scanning electron microscopy and uniaxial tensile testing. ELP4 was successfully adsorbed onto the scaffolds; HVFF were seeded and their viability, proliferation, morphology, and gene expression were characterized. Aligned and unaligned scaffolds had initial elastic moduli of ~14 MPa, ~5 MPa and ~0.3 MPa, ~0.6 MPa in the preferred and cross-preferred directions, respectively. Scaffold topography had an effect on the orientation of the cells, with HVFF seeded on aligned scaffolds having a significantly different (p < 0.001) angle of orientation than HVFF cultured on unaligned scaffolds. This same effect and significant difference (p < 0.001) was seen on aligned and unaligned scaffolds coated with ELP4. Scaffold alignment and ELP4 coating impacted ECM gene expression. ELP4 coating, and aligned scaffolds upregulated elastin synthesis when tested on day 7 without a concomitant upregulation of collagen III synthesis. Collectively, results indicate that aligned electrospun scaffolds and ELP4 coating, are promising candidates in the development of biodegradeable vocal fold lamina propria constructs. PMID:25462850

  11. Effect of fiber diameter and alignment of electrospun polyurethane meshes on mesenchymal progenitor cells.

    PubMed

    Bashur, Chris A; Shaffer, Robyn D; Dahlgren, Linda A; Guelcher, Scott A; Goldstein, Aaron S

    2009-09-01

    Effective strategies to guide cell alignment and the deposition of an oriented extracellular matrix are critical for the development of anisotropic engineered tissues suitable for the repair of ligament defects. Electrospinning is a promising means to create meshes that can align adherent cells, but the effect of fiber mesh architecture on differentiation has not been examined closely. Therefore, the goal of this study was to determine the effect of fiber diameter and the degree of fiber alignment on mesenchymal progenitor cell morphology, proliferation, and ligament gene expression. Specifically, a poly(ester urethane)urea elastomer was electrospun onto rigid supports under conditions designed to independently vary the mean fiber diameter (from 0.28 to 2.3 microm) and the degree of fiber alignment. Bone marrow stromal cells--seeded onto supported meshes--adhered to and proliferated on all surfaces. Cells assumed a more spindle-shaped morphology with increasing fiber diameter and degree of fiber alignment, and oriented parallel to fibers on aligned meshes. Expression of the ligament markers collagen 1alpha1, decorin, and tenomodulin appeared to be sensitive to fiber diameter and greatest on the smallest fibers. Concurrently, expression of the transcription factor scleraxis appeared to decrease with increasing fiber alignment. These results suggest that the formation of a ligament-like tissue on electrospun scaffolds is enhanced when the scaffolds consist of aligned submicron fibers. PMID:19292650

  12. BinAligner: a heuristic method to align biological networks.

    PubMed

    Yang, Jialiang; Li, Jun; Grünewald, Stefan; Wan, Xiu-Feng

    2013-01-01

    The advances in high throughput omics technologies have made it possible to characterize molecular interactions within and across various species. Alignments and comparison of molecular networks across species will help detect orthologs and conserved functional modules and provide insights on the evolutionary relationships of the compared species. However, such analyses are not trivial due to the complexity of network and high computational cost. Here we develop a mixture of global and local algorithm, BinAligner, for network alignments. Based on the hypotheses that the similarity between two vertices across networks would be context dependent and that the information from the edges and the structures of subnetworks can be more informative than vertices alone, two scoring schema, 1-neighborhood subnetwork and graphlet, were introduced to derive the scoring matrices between networks, besides the commonly used scoring scheme from vertices. Then the alignment problem is formulated as an assignment problem, which is solved by the combinatorial optimization algorithm, such as the Hungarian method. The proposed algorithm was applied and validated in aligning the protein-protein interaction network of Kaposi's sarcoma associated herpesvirus (KSHV) and that of varicella zoster virus (VZV). Interestingly, we identified several putative functional orthologous proteins with similar functions but very low sequence similarity between the two viruses. For example, KSHV open reading frame 56 (ORF56) and VZV ORF55 are helicase-primase subunits with sequence identity 14.6%, and KSHV ORF75 and VZV ORF44 are tegument proteins with sequence identity 15.3%. These functional pairs can not be identified if one restricts the alignment into orthologous protein pairs. In addition, BinAligner identified a conserved pathway between two viruses, which consists of 7 orthologous protein pairs and these proteins are connected by conserved links. This pathway might be crucial for virus packing and

  13. Pupil Alignment Considerations for Large, Deployable Space Telescopes

    NASA Technical Reports Server (NTRS)

    Bos, Brent J.; Ohl, Raymond G.; Kubalak, Daivd A.

    2011-01-01

    For many optical systems the properties and alignment of the internal apertures and pupils are not critical or controlled with high precision during optical system design, fabrication or assembly. In wide angle imaging systems, for instance, the entrance pupil position and orientation is typically unconstrained and varies over the system s field of view in order to optimize image quality. Aperture tolerances usually do not receive the same amount of scrutiny as optical surface aberrations or throughput characteristics because performance degradation is typically graceful with misalignment, generally only causing a slight reduction in system sensitivity due to vignetting. But for a large deployable space-based observatory like the James Webb Space Telescope (JWST), we have found that pupil alignment is a key parameter. For in addition to vignetting, JWST pupil errors cause uncertainty in the wavefront sensing process that is used to construct the observatory on-orbit. Furthermore they also open stray light paths that degrade the science return from some of the telescope s instrument channels. In response to these consequences, we have developed several pupil measurement techniques for the cryogenic vacuum test where JWST science instrument pupil alignment is verified. These approaches use pupil alignment references within the JWST science instruments; pupil imaging lenses in three science instrument channels; and unique pupil characterization features in the optical test equipment. This will allow us to verify and crosscheck the lateral pupil alignment of the JWST science instruments to approximately 1-2% of their pupil diameters.

  14. Oriental noodles.

    PubMed

    Hou, G

    2001-01-01

    Oriental noodles have been consumed for thousands of years and remain an important part in the diet of many Asians. There is a wide variety of noodles in Asia with many local variations as result of differences in culture, climate, region and a host of other factors. In this article noodle classification, formulation, processing and evaluation are reviewed, with emphasis on eight major types. Wheat quality requirements, basic flour specifications, ingredient functions, and production variables are identified for different noodles. In the evaluation of flour for noodle making, three key quality attributes are considered: processability, noodle color and texture. Noodle process behavior is particularly important in the modern industrial production. Each noodle type has its own unique color and texture characteristics. Flour color, protein content, ash content, yellow pigment and polyphenol oxidase activity are important factors responsible for noodle color. Starch characteristics, protein content and quality play major roles in governing the texture of cooked noodles. However, the relative importance of starch and proteins varies considerably with noodle type. Starch pasting quality is the primary trait determining the eating quality of Japanese and Korean noodles that are characterized by soft and elastic texture, while protein quantity and strength are very important to Chinese-type noodles that require firm bite and chewy texture. Other factors such as ingredients added in the noodle formula and processing variables used during noodle preparation also affect the cooked noodle texture as well. PMID:11285682

  15. Comparison of lattice preferred orientation and magnetic fabric of a chloritoid-bearing slate

    NASA Astrophysics Data System (ADS)

    Haerinck, Tom; Wenk, Hans-Rudolf; Debacker, Timothy N.; Sintubin, Manuel

    2014-05-01

    A regional analysis of the anisotropy of the magnetic susceptibility (AMS) on chloritoid-bearing slates of the Paleozoic Plougastel Formation in the low-grade metamorphic conditions (epizonal) of the Monts d'Arrée slate belt in Central Armorica (Brittany, France) reveals very high values for the degree of anisotropy (PJ), up to 1.43 (Haerinck et al. 2013a). In contrast, stratigraphically equivalent slates free of chloritoid, in the very low-grade metamorphic conditions (anchizonal) of the Crozon fold-and-thrust belt, show a lower degree of anisotropy, with PJ values up to 1.27. Classically, very strong magnetic fabrics (i.e. those with PJ above 1.35) are attributed to a contribution of ferromagnetic (s.l.) minerals. Nonetheless, high-field torque magnetometry indicates that the magnetic fabric of the chloritoid-bearing slates is dominantly paramagnetic. The ferromagnetic (sensu lato) contribution to the AMS is less than 10%. Based on these observations, it would seem that chloritoid has an intrinsic magnetic anisotropy that is significantly higher than that of most paramagnetic silicates and the frequently used upper limit for the paramagnetic contribution to the AMS. Using two independent approaches, i.e. (a) directional magnetic hysteresis measurements, and (b) torque magnetometry, on a collection of single chloritoid crystals, collected from different tectonometamorphic settings worldwide, the magnetocrystalline anisotropy of monoclinic chloritoid has been determined (Haerinck et al. 2013b). The determined paramagnetic high-field AMS ellipsoids have a highly oblate shape with the minimum susceptibility direction subparallel to the crystallographic c-axis of chloritoid and the degree of anisotropy of chloritoid is found to be 1.47 ± 0.06. The obtained very high magnetocrystalline degree of anisotropy suggests that chloritoid-bearing slates with a pronounced mineral alignment can have a high degree of anisotropy (PJ) without the need of invoking a significant

  16. An adiabatic approximation for grain alignment theory

    NASA Astrophysics Data System (ADS)

    Roberge, W. G.

    1997-10-01

    The alignment of interstellar dust grains is described by the joint distribution function for certain `internal' and `external' variables, where the former describe the orientation of the axes of a grain with respect to its angular momentum, J, and the latter describe the orientation of J relative to the interstellar magnetic field. I show how the large disparity between the dynamical time-scales of the internal and external variables - which is typically 2-3 orders of magnitude - can be exploited to simplify calculations of the required distribution greatly. The method is based on an `adiabatic approximation' which closely resembles the Born-Oppenheimer approximation in quantum mechanics. The adiabatic approximation prescribes an analytic distribution function for the `fast' dynamical variables and a simplified Fokker-Planck equation for the `slow' variables which can be solved straightforwardly using various techniques. These solutions are accurate to O(epsilon), where epsilon is the ratio of the fast and slow dynamical time-scales. As a simple illustration of the method, I derive an analytic solution for the joint distribution established when Barnett relaxation acts in concert with gas damping. The statistics of the analytic solution agree with the results of laborious numerical calculations which do not exploit the adiabatic approximation.

  17. An Adiabatic Approximation for Grain Alignment Theory

    NASA Astrophysics Data System (ADS)

    Roberge, W. G.

    1997-12-01

    The alignment of interstellar dust grains is described by the joint distribution function for certain ``internal'' and ``external'' variables, where the former describe the orientation of a grain's axes with respect to its angular momentum, J, and the latter describe the orientation of J relative to the interstellar magnetic field. I show how the large disparity between the dynamical timescales of the internal and external variables--- which is typically 2--3 orders of magnitude--- can be exploited to greatly simplify calculations of the required distribution. The method is based on an ``adiabatic approximation'' which closely resembles the Born-Oppenheimer approximation in quantum mechanics. The adiabatic approximation prescribes an analytic distribution function for the ``fast'' dynamical variables and a simplified Fokker-Planck equation for the ``slow'' variables which can be solved straightforwardly using various techniques. These solutions are accurate to cal {O}(epsilon ), where epsilon is the ratio of the fast and slow dynamical timescales. As a simple illustration of the method, I derive an analytic solution for the joint distribution established when Barnett relaxation acts in concert with gas damping. The statistics of the analytic solution agree with the results of laborious numerical calculations which do not exploit the adiabatic approximation.

  18. Aligned carbon nanotube sheet piezoresistive strain sensors

    NASA Astrophysics Data System (ADS)

    Li, Ang; Bogdanovich, Alexander E.; Bradford, Philip D.

    2015-09-01

    Carbon nanotubes (CNTs) have a unique set of properties that may be useful in the production of next generation structural health monitoring composites. This research introduces a novel CNT based material system for strain and damage sensing applications. An aligned sheet of interconnected CNTs was drawn from a chemical vapor deposition grown CNT array and then bonded to the surface of glass fiber/epoxy composite coupons. Various types of mechanical tests were conducted, accompanied by real-time electrical data acquisition, in order to evaluate the electro-mechanical behavior of the developed sensing material. Specimens were loaded in the longitudinal and transverse CNT sheet orientations to investigate the anisotropy of the piezoresistive effect. The CNT sheets exhibited good sensing stability, linearity, sensitivity and repeatability within a practical strain range; which are crucial sensor features for health monitoring. It was also demonstrated that the CNT orientation in the sheet had a dramatic effect on the sensitivity, thus validating the usefulness of this sensing material for directional strain/damage monitoring. Finally, pre-straining of the CNT sheet sensors was conducted to further enhance the linearity of electro-mechanical response and long-term stability of the sensors during cyclic loading.

  19. Littrow angle method to remove alignment errors in grating pulse compressors.

    PubMed

    Guardalben, M J

    2008-09-20

    An alignment method for pulse-compression gratings that obviates the need to place the gratings at normal incidence to remove grating-tip error is proposed. Grating-tip and groove-orientation errors are removed using two alignment wavelengths in a manner analogous to a laser-beam pointing and centering procedure entirely at the respective Littrow angles for the two wavelengths. By choosing wavelengths with Littrow angles close to the use angle of the grating, the residual tip and groove-orientation errors that may be introduced when the grating mount is tilted to its use angle are reduced. This method has greatly facilitated the alignment of the OMEGA Extended Performance (EP) large-aperture pulse compressors, thereby reducing residual pulse-front tilt caused by nonparallel gratings. OMEGA EP is a high-energy, petawatt-class laser at the University of Rochester's Laboratory for Laser Energetics. A numerical simulation of the alignment procedure is presented. PMID:18806858

  20. Littrow Angle Method to Remove Alignment Errors in Grating Pulse Compressors

    SciTech Connect

    Guardalben, M.J.

    2008-09-16

    An alignment method for pulse-compression gratings that obviates the need to place the gratings at normal incidence to remove grating-tip error is proposed. Grating-tip and groove-orientation errors are removed using two alignment wavelengths in a manner analogous to a laser-beam pointing and centering procedure entirely at the respective Littrow angles for the two wavelengths. By choosing wavelengths with Littrow angles close to the use angle of the grating, the residual tip and groove-orientation errors that may be introduced when the grating mount is tilted to its use angle are reduced. This method has greatly facilitated the alignment of the OMEGA Extended Performance (EP) large-aperture pulse compressors, thereby reducing residual pulse-front tilt caused by nonparallel gratings. OMEGA EP is a highenergy, petawatt-class laser at the University of Rochester’s Laboratory for Laser Energetics. A numerical simulation of the alignment procedure is presented.

  1. Littrow angle method to remove alignment errors in grating pulse compressors

    SciTech Connect

    Guardalben, M. J

    2008-09-20

    An alignment method for pulse-compression gratings that obviates the need to place the gratings at normal incidence to remove grating-tip error is proposed. Grating-tip and groove-orientation errors are removed using two alignment wavelengths in a manner analogous to a laser-beam pointing and centering procedure entirely at the respective Littrow angles for the two wavelengths. By choosing wavelengths with Littrow angles close to the use angle of the grating, the residual tip and groove-orientation errors that may be introduced when the grating mount is tilted to its use angle are reduced. This method has greatly facilitated the alignment of the OMEGA Extended Performance (EP) large-aperture pulse compressors, thereby reducing residual pulse-front tilt caused by nonparallel gratings. OMEGA EP is a high-energy, petawatt-class laser at the University of Rochester's Laboratory for Laser Energetics. A numerical simulation of the alignment procedure is presented.

  2. Investigating Conversational Dynamics: Interactive Alignment, Interpersonal Synergy, and Collective Task Performance.

    PubMed

    Fusaroli, Riccardo; Tylén, Kristian

    2016-01-01

    This study investigates interpersonal processes underlying dialog by comparing two approaches, interactive alignment and interpersonal synergy, and assesses how they predict collective performance in a joint task. While the interactive alignment approach highlights imitative patterns between interlocutors, the synergy approach points to structural organization at the level of the interaction-such as complementary patterns straddling speech turns and interlocutors. We develop a general, quantitative method to assess lexical, prosodic, and speech/pause patterns related to the two approaches and their impact on collective performance in a corpus of task-oriented conversations. The results show statistical presence of patterns relevant for both approaches. However, synergetic aspects of dialog provide the best statistical predictors of collective performance and adding aspects of the alignment approach does not improve the model. This suggests that structural organization at the level of the interaction plays a crucial role in task-oriented conversations, possibly constraining and integrating processes related to alignment. PMID:25988263

  3. Were Greek temples oriented towards aurorae?

    NASA Astrophysics Data System (ADS)

    Liritzis, Ioannis; Vassiliou, Helen

    2006-02-01

    Two ancient Greek temples of Apollo at Bassae (Phigaleia, western Peloponnese, Greece), and Thermon at Aetolia, (Aetoloacarnania, western central Greece), have a north-south orientation of their main entrances. This is a rather rare alignment of temples in general and specifically of Apollo in classical Greece, where most of them have broadly an east-west orientation. Based on historical and mythological accounts, as well as astronomical orientation measurements, the northern direction orientation of these constructions may relate to the rare, albeit impressive, occurrence of aurorae borealis, the northern lights. These strong lights are attributed to god Apollo by the epithet ``hyperborean'', meaning to the northern lands. Attribution is supported by archaeomagnetic directional data accompanied by auroral occurrence during those times.

  4. Iterative most likely oriented point registration.

    PubMed

    Billings, Seth; Taylor, Russell

    2014-01-01

    A new algorithm for model based registration is presented that optimizes both position and surface normal information of the shapes being registered. This algorithm extends the popular Iterative Closest Point (ICP) algorithm by incorporating the surface orientation at each point into both the correspondence and registration phases of the algorithm. For the correspondence phase an efficient search strategy is derived which computes the most probable correspondences considering both position and orientation differences in the match. For the registration phase an efficient, closed-form solution provides the maximum likelihood rigid body alignment between the oriented point matches. Experiments by simulation using human femur data demonstrate that the proposed Iterative Most Likely Oriented Point (IMLOP) algorithm has a strong accuracy advantage over ICP and has increased ability to robustly identify a successful registration result. PMID:25333116

  5. Mechanism of Calcite Co-Orientation in the Sea Urchin Tooth

    SciTech Connect

    Killian, Christopher; Metzler, Rebecca; Gong, Y. U. T.; Olson, Ian; Aizenberg, Joanna; Politi, Yael; Wilt, Fred; Scholl, Andreas; Young, Anthony; Doran, Andrew; Kunz, Martin; Tamura, Nobumichi; Coppersmith, Susan; Gilbert, P. U. P. A.

    2009-12-01

    Sea urchin teeth are remarkable and complex calcite structures, continuously growing at the forming end and self-sharpening at the mature grinding tip. The calcite (CaCO{sub 3}) crystals of tooth components, plates, fibers, and a high-Mg polycrystalline matrix, have highly co-oriented crystallographic axes. This ability to co-orient calcite in a mineralized structure is shared by all echinoderms. However, the physico-chemical mechanism by which calcite crystals become co-oriented in echinoderms remains enigmatic. Here, we show differences in calcite c-axis orientations in the tooth of the purple sea urchin (Strongylocentrotus purpuratus), using high-resolution X-ray photoelectron emission spectromicroscopy (X-PEEM) and microbeam X-ray diffraction ({mu}XRD). All plates share one crystal orientation, propagated through pillar bridges, while fibers and polycrystalline matrix share another orientation. Furthermore, in the forming end of the tooth, we observe that CaCO{sub 3} is present as amorphous calcium carbonate (ACC). We demonstrate that co-orientation of the nanoparticles in the polycrystalline matrix occurs via solid-state secondary nucleation, propagating out from the previously formed fibers and plates, into the amorphous precursor nanoparticles. Because amorphous precursors were observed in diverse biominerals, solid-state secondary nucleation is likely to be a general mechanism for the co-orientation of biomineral components in organisms from different phyla.

  6. Schottky-contacted vertically self-aligned ZnO nanorods for hydrogen gas nanosensor applications

    SciTech Connect

    Ranwa, Sapana; Kumar, Mohit; Kumar, Mahesh; Singh, Jitendra; Fanetti, Mattia

    2015-07-21

    Vertically well aligned ZnO nanorods (NRs) were grown on Si(100) substrate using RF magnetron sputtering technique. Scanning electron microscopy images confirms uniform distribution of NRs on 2 in. wafer with average diameter, height and density being ∼75 nm, ∼850 nm, and ∼1.5 × 10{sup 10} cm{sup −2}, respectively. X-ray diffraction reveals that the ZnO NRs are grown along c-axis direction with wurtzite crystal structure. Cathodoluminescence spectroscopy, which shows a single strong peak around 3.24 eV with full width half maxima 130 meV, indicates the high crystalline and optical quality of ZnO and very low defect density. Vertically aligned nanosensors were fabricated by depositing gold circular Schottky contacts on ZnO NRs. Resistance responses of nanosensors were observed in the range from 50 to 150 °C in 1% and 5% hydrogen in argon environment, which is below and above the explosive limit (4%) of hydrogen in air. The nanosensor's sensitivity increases from 11% to 67% with temperature from 50 to 150 °C and also shows fast response time (9–16 s) and moderate recovery time (100–200 s). A sensing mechanism is proposed based on Schottky barrier changes at heterojunctions and change in depletion region of NRs.

  7. Al-doped ZnO aligned nanorod arrays for opto-electronic and sensor applications

    NASA Astrophysics Data System (ADS)

    Holloway, T.; Mundle, R.; Dondapati, H.; Konda, R. B.; Bahoura, M.; Pradhan, A. K.

    2012-04-01

    We report on the growth of vertically aligned Al:ZnO nanorod arrays synthesized by the hydrothermal technique at considerably low temperature on a sputtered Al:ZnO seed layer. The morphology demonstrates that the nanorod arrays maintain remarkable alignment along the c-axis over a large area. The optoelectronic properties of nanorod arrays on Al:ZnO/p-Si seed layer with SiO2 have been illustrated. The photocurrent is significantly reduced in nanorod arrays on AZO/SiO2/p-Si heterojunction due to multiple scattering phenomena associated with the nanorod arrays. The optical properties of the AZO film with and without the AZO nanorod arrays were investigated. Also the effects of an intermediate layer in the AZO/P-Si heterojunction structure with and without the AZO nanorod array present were explored. All the various intermediate layers displayed photovoltaic effect behavior, especially with the AZO/SiO2/P-Si heterojunction structure, which exhibited ideal diode behavior. The optoelectronic properties of nanorod arrays on AZO/P-Si seed layer with SiO2 have been illustrated. The photocurrent is significantly reduced in nanorod arrays on AZO/SiO2/P-Si heterojunction due to multiple scattering phenomena associated with the nanorod arrays. The results have tremendous impact for sensor fabrication, including glucose sensor.

  8. Schottky-contacted vertically self-aligned ZnO nanorods for hydrogen gas nanosensor applications

    NASA Astrophysics Data System (ADS)

    Ranwa, Sapana; Kumar, Mohit; Singh, Jitendra; Fanetti, Mattia; Kumar, Mahesh

    2015-07-01

    Vertically well aligned ZnO nanorods (NRs) were grown on Si(100) substrate using RF magnetron sputtering technique. Scanning electron microscopy images confirms uniform distribution of NRs on 2 in. wafer with average diameter, height and density being ˜75 nm, ˜850 nm, and ˜1.5 × 1010 cm-2, respectively. X-ray diffraction reveals that the ZnO NRs are grown along c-axis direction with wurtzite crystal structure. Cathodoluminescence spectroscopy, which shows a single strong peak around 3.24 eV with full width half maxima 130 meV, indicates the high crystalline and optical quality of ZnO and very low defect density. Vertically aligned nanosensors were fabricated by depositing gold circular Schottky contacts on ZnO NRs. Resistance responses of nanosensors were observed in the range from 50 to 150 °C in 1% and 5% hydrogen in argon environment, which is below and above the explosive limit (4%) of hydrogen in air. The nanosensor's sensitivity increases from 11% to 67% with temperature from 50 to 150 °C and also shows fast response time (9-16 s) and moderate recovery time (100-200 s). A sensing mechanism is proposed based on Schottky barrier changes at heterojunctions and change in depletion region of NRs.

  9. Alignment and Graphene-Assisted Decoration of Lyotropic Chromonic Liquid Crystals Containing DNA Origami Nanostructures.

    PubMed

    Martens, Kevin; Funck, Timon; Kempter, Susanne; Roller, Eva-Maria; Liedl, Tim; Blaschke, Benno M; Knecht, Peter; Garrido, José Antonio; Zhang, Bingru; Kitzerow, Heinz

    2016-03-01

    Composites of DNA origami nanostructures dispersed in a lyotropic chromonic liquid crystal are studied by polarizing optical microscopy. The homogeneous aqueous dispersions can be uniformly aligned by confinement between two glass substrates, either parallel to the substrates owing to uniaxial rubbing or perpendicular to the substrates using ozonized graphene layers. These opportunities of uniform alignment may pave the way for tailored anisometric plasmonic DNA nanostructures to photonic materials. In addition, a decorated texture with nonuniform orientation is observed on substrates coated with pristine graphene. When the water is allowed to evaporate slowly, microscopic crystal needles appear, which are aligned along the local orientation of the director. This decoration method can be used for studying the local orientational order and the defects in chromonic liquid crystals. PMID:26849188

  10. Highly aligned arrays of high aspect ratio barium titanate nanowires via hydrothermal synthesis

    SciTech Connect

    Bowland, Christopher C.; Zhou, Zhi; Malakooti, Mohammad H.; Sodano, Henry A.

    2015-06-01

    We report on the development of a hydrothermal synthesis procedure that results in the growth of highly aligned arrays of high aspect ratio barium titanate nanowires. Using a multiple step, scalable hydrothermal reaction, a textured titanium dioxide film is deposited on titanium foil upon which highly aligned nanowires are grown via homoepitaxy and converted to barium titanate. Scanning electron microscope images clearly illustrate the effect the textured film has on the degree of orientation of the nanowires. The alignment of nanowires is quantified by calculating the Herman's Orientation Factor, which reveals a 58% improvement in orientation as compared to growth in the absence of the textured film. The ferroelectric properties of barium titanate combined with the development of this scalable growth procedure provide a powerful route towards increasing the efficiency and performance of nanowire-based devices in future real-world applications such as sensing and power harvesting.

  11. Vertical alignment of single-walled carbon nanotube films formed by electrophoretic deposition.

    PubMed

    Kim, Sung-Kyoung; Lee, Haiwon; Tanaka, Hirofumi; Weiss, Paul S

    2008-11-18

    Films of chemically shortened and functionalized single-walled carbon nanotubes (SWNTs) have been formed on a gold electrode by electrophoretic deposition. Applying ultrasonic energy resulted in dramatic changes of the film morphology; the deposited SWNT bundles reassembled and oriented normal to the electrode. Oriented SWNT bundles with high density (more than 250 bundles/microm (2)) not only presented narrow size distributions, but uniformly spread on the electrode. We discuss the mechanism of SWNT orientation by analyzing the variation in the film morphology with ultrasonication time. In addition, we suggest that the 3D displays of AFM images can lead to misjudgment of nanotube alignment. The method for aligning SWNTs normal to the electrode may be competitive with chemical vapor deposition or screen printing, the predominant methods by which vertically aligned SWNT films have been fabricated to date. PMID:18925761

  12. Best Angle to Orient Two Intersecting Lines

    SciTech Connect

    Awwal, A S; Ferguson, S W; Shull, P B

    2006-07-25

    Fiducials in the form of intersecting straight lines are used to align the target in the final target chamber of the National Ignition Facility of Lawrence Livermore National Laboratory. One of the techniques used to locate these lines is the Hough transform. When two lines intersect at a 90 degree angle, it is tempting to orient the lines to horizontal and vertical directions. There are other possible angles at which the lines may be oriented. One question that arises while designing the fiducials is whether there is a preferred angle or range of angles that leads to higher accuracy. This work attempts to answer this question through detailed computer simulation.

  13. Nanostructured carbon films with oriented graphitic planes

    SciTech Connect

    Teo, E. H. T.; Kalish, R.; Kulik, J.; Kauffmann, Y.; Lifshitz, Y.

    2011-03-21

    Nanostructured carbon films with oriented graphitic planes can be deposited by applying energetic carbon bombardment. The present work shows the possibility of structuring graphitic planes perpendicular to the substrate in following two distinct ways: (i) applying sufficiently large carbon energies for deposition at room temperature (E>10 keV), (ii) utilizing much lower energies for deposition at elevated substrate temperatures (T>200 deg. C). High resolution transmission electron microscopy is used to probe the graphitic planes. The alignment achieved at elevated temperatures does not depend on the deposition angle. The data provides insight into the mechanisms leading to the growth of oriented graphitic planes under different conditions.

  14. Orientation of cellulose nanowhiskers in polyvinyl alcohol

    NASA Astrophysics Data System (ADS)

    Kvien, I.; Oksman, K.

    2007-06-01

    The goal of this study was to align cellulose nanowhiskers in a polymer using a strong magnetic field and thereby obtain a unidirectional reinforced nanocomposite. Cellulose whiskers (2 wt. %) were incorporated in a polyvinyl alcohol matrix using solution casting with water as the solvent. The suspension was cast and the water was evaporated while a homogeneous magnetic field of 7 T was applied. Different microscopy investigations of prepared nanocomposites indicated that the cellulose whiskers were oriented perpendicular to the direction of the magnetic field. Dynamic mechanical thermal analysis further strengthened the idea of alignment because the results showed that the dynamic modulus of the nanocomposite was around 2 GPa higher at room temperature in the aligned direction compared to the transverse direction.

  15. A Nonlinear Observer for Gyro Alignment Estimation

    NASA Technical Reports Server (NTRS)

    Thienel, J.; Sanner, R. M.

    2003-01-01

    A nonlinear observer for gyro alignment estimation is presented. The observer is composed of two error terms, an attitude error and an alignment error. The observer is globally stable with exponential convergence of the attitude errors. The gyro alignment estimate converges to the true alignment when the system is completely observable.

  16. Global Alignment System for Large Genomic Sequencing

    2002-03-01

    AVID is a global alignment system tailored for the alignment of large genomic sequences up to megabases in length. Features include the possibility of one sequence being in draft form, fast alignment, robustness and accuracy. The method is an anchor based alignment using maximal matches derived from suffix trees.

  17. Orientation of churches by magnetic compasses?

    NASA Astrophysics Data System (ADS)

    Arneitz, Patrick; Draxler, Andrea; Rauch, Roman; Leonhardt, Roman

    2014-07-01

    In Christian religion the sunrise is of great symbolic importance. Therefore, many churches constructed in the Middle Ages point towards geographic East. Although `easting' of churches actually refers to the alignment towards the azimuth of sunrise on the individual churches' patron's day, deviation of nave alignment from the geographic East direction is often assumed to be caused by the use of magnetic compasses. Therefore, the church alignment could provide information about historical magnetic declination. We investigate 124 churches in Lower Austria and 68 in northern Germany to clarify this question as well as the `easting' hypothesis. Church orientations are determined from georeferenced satellite images. Metadata such as the construction year, possible reconstructions and the church patron are gathered to determine the date when current church direction was appointed, and to perform sunrise calculations. However, due to uncertainties of construction years and the declining importance of orientation tradition after the 15th century several churches are excluded from the study. Thus, 32 churches with reliable metadata remain for evaluation in each region. The analysis reveals a preferred alignment of naves towards geographic East in Lower Austria and northern Germany. The construction and alignment of churches was often affected by the pre-existing buildings and streets or topography and natural surroundings. Therefore, deviations from geographic East are more likely caused by town or landscape. The mean deviations from magnetic East in both regions are large compared to the mean deviations from geographic East and sunrise azimuths. Hence, the use of compasses cannot be confirmed. Despite a few churches indicating orientation according to their patron's day, a general trend cannot be observed in the data reviewed.

  18. Alignment of a model amyloid Peptide fragment in bulk and at a solid surface.

    PubMed

    Hamley, Ian W; Castelletto, Valeria; Moulton, Claire M; Rodríguez-Pérez, José; Squires, Adam M; Eralp, Tugce; Held, Georg; Hicks, Matthew R; Rodger, Alison

    2010-06-24

    The alignment of model amyloid peptide YYKLVFFC is investigated in bulk and at a solid surface using a range of spectroscopic methods employing polarized radiation. The peptide is based on a core sequence of the amyloid beta (Abeta) peptide, KLVFF. The attached tyrosine and cysteine units are exploited to yield information on alignment and possible formation of disulfide or dityrosine links. Polarized Raman spectroscopy on aligned stalks provides information on tyrosine orientation, which complements data from linear dichroism (LD) on aqueous solutions subjected to shear in a Couette cell. LD provides a detailed picture of alignment of peptide strands and aromatic residues and was also used to probe the kinetics of self-assembly. This suggests initial association of phenylalanine residues, followed by subsequent registry of strands and orientation of tyrosine residues. X-ray diffraction (XRD) data from aligned stalks is used to extract orientational order parameters from the 0.48 nm reflection in the cross-beta pattern, from which an orientational distribution function is obtained. X-ray diffraction on solutions subject to capillary flow confirmed orientation in situ at the level of the cross-beta pattern. The information on fibril and tyrosine orientation from polarized Raman spectroscopy is compared with results from NEXAFS experiments on samples prepared as films on silicon. This indicates fibrils are aligned parallel to the surface, with phenyl ring normals perpendicular to the surface. Possible disulfide bridging leading to peptide dimer formation was excluded by Raman spectroscopy, whereas dityrosine formation was probed by fluorescence experiments and was found not to occur except under alkaline conditions. Congo red binding was found not to influence the cross-beta XRD pattern. PMID:20509614

  19. Preparation of films of a highly aligned lipid cubic phase.

    PubMed

    Squires, Adam M; Hallett, James E; Beddoes, Charlotte M; Plivelic, Tomás S; Seddon, Annela M

    2013-02-12

    We demonstrate a method by which we can produce an oriented film of an inverse bicontinuous cubic phase (Q(II)(D)) formed by the lipid monoolein (MO). By starting with the lipid as a disordered precursor (the L(3) phase) in the presence of butanediol, we can obtain a film of the Q(II)(D) phase showing a high degree of in-plane orientation by controlled dilution of the sample under shear within a linear flow cell. We demonstrate that the direction of orientation of the film is different from that found in the oriented bulk material that we have reported previously; therefore, we can now reproducibly form Q(II)(D) samples oriented with either the [110] or the [100] axis aligned in the flow direction depending on the method of preparation. The deposition of MO as a film, via a moving fluid-air interface that leaves a coating of MO in the L(3) phase on the capillary wall, leads to a sample in the [110] orientation. This contrasts with the bulk material that we have previously demonstrated to be oriented in the [100] direction, arising from flow producing an oriented bulk slug of material within the capillary tube. The bulk sample contains significant amounts of residual butanediol, which can be estimated from the lattice parameter of the Q(II)(D) phase obtained. The sample orientation and lattice parameters are determined from synchrotron small-angle X-ray scattering patterns and confirmed by simulations. This has potential applications in the production of template materials and the growth of protein crystals for crystallography as well as deepening our understanding of the mechanisms underlying the behavior of lyotropic liquid-crystal phases. PMID:23347289

  20. Combining Multiple Pairwise Structure-based Alignments

    SciTech Connect

    2014-11-12

    CombAlign is a new Python code that generates a gapped, one-to-many, multiple structure-based sequence alignment(MSSA) given a set of pairwise structure-based alignments. In order to better define regions of similarity among related protein structures, it is useful to detect the residue-residue correspondences among a set of pairwise structure alignments. Few codes exist for constructing a one-to-many, multiple sequence alignment derived from a set of structure alignments, and we perceived a need for creating a new tool for combing pairwise structure alignments that would allow for insertion of gaps in the reference structure.

  1. Macroscopic Ensembles of Aligned Carbon Nanotubes in Bubble Imprints Studied by Polarized Raman Microscopy

    DOE PAGESBeta

    Ushiba, Shota; Hoyt, Jordan; Masui, Kyoko; Kono, Junichiro; Kawata, Satoshi; Shoji, Satoru

    2014-01-01

    We study the alignment of single-wall carbon nanotubes (SWCNTs) in bubble imprints through polarized Raman microscopy. A hemispherical bubble containing SWCNTs is pressed against a glass substrate, resulting in an imprint of the bubble membrane with a coffee ring on the substrate. We find that macroscopic ensembles of aligned SWCNTs are obtained in the imprints, in which there are three patterns of orientations: (i) azimuthal alignment on the coffee ring, (ii) radial alignment at the edge of the membrane, and (iii) random orientation at the center of the membrane. We also find that the alignment of SWCNTs in the imprintsmore » can be manipulated by spinning bubbles. The orientation of SWCNTs on the coffee ring is directed radially, which is orthogonal to the case of unspun bubbles. This approach enables one to align SWCNTs in large quantities and in a short time, potentially opening up a wide range of CNT-based electronic and optical applications.« less

  2. Optimization of bicelle lipid composition and temperature for EPR spectroscopy of aligned membranes

    NASA Astrophysics Data System (ADS)

    McCaffrey, Jesse E.; James, Zachary M.; Thomas, David D.

    2015-01-01

    We have optimized the magnetic alignment of phospholipid bilayered micelles (bicelles) for EPR spectroscopy, by varying lipid composition and temperature. Bicelles have been extensively used in NMR spectroscopy for several decades, in order to obtain aligned samples in a near-native membrane environment and take advantage of the intrinsic sensitivity of magnetic resonance to molecular orientation. Recently, bicelles have also seen increasing use in EPR, which offers superior sensitivity and orientational resolution. However, the low magnetic field strength (less than 1 T) of most conventional EPR spectrometers results in homogeneously oriented bicelles only at a temperature well above physiological. To optimize bicelle composition for magnetic alignment at reduced temperature, we prepared bicelles containing varying ratios of saturated (DMPC) and unsaturated (POPC) phospholipids, using EPR spectra of a spin-labeled fatty acid to assess alignment as a function of lipid composition and temperature. Spectral analysis showed that bicelles containing an equimolar mixture of DMPC and POPC homogeneously align at 298 K, 20 K lower than conventional DMPC-only bicelles. It is now possible to perform EPR studies of membrane protein structure and dynamics in well-aligned bicelles at physiological temperatures and below.

  3. Grain Alignment in Starless Cores

    NASA Astrophysics Data System (ADS)

    Jones, T. J.; Bagley, M.; Krejny, M.; Andersson, B.-G.; Bastien, P.

    2015-01-01

    We present near-IR polarimetry data of background stars shining through a selection of starless cores taken in the K band, probing visual extinctions up to {{A}V}˜ 48. We find that {{P}K}/{{τ }K} continues to decline with increasing AV with a power law slope of roughly -0.5. Examination of published submillimeter (submm) polarimetry of starless cores suggests that by {{A}V}≳ 20 the slope for P versus τ becomes ˜-1, indicating no grain alignment at greater optical depths. Combining these two data sets, we find good evidence that, in the absence of a central illuminating source, the dust grains in dense molecular cloud cores with no internal radiation source cease to become aligned with the local magnetic field at optical depths greater than {{A}V}˜ 20. A simple model relating the alignment efficiency to the optical depth into the cloud reproduces the observations well.

  4. Alignment of the VISA Undulator

    SciTech Connect

    Ruland, Robert

    1999-04-15

    The Visible-Infrared SASE Amplifier (VISA) undulator consists of four 99cm long segments. Each undulator segment is set up on a pulsed-wire bench, to characterize the magnetic properties and to locate the magnetic axis of the FODO array. Subsequently, the location of the magnetic axis, as defined by the wire, is referenced to tooling balls on each magnet segment by means of a straightness interferometer. After installation in the vacuum chamber, the four magnet segments are aligned with respect to themselves and globally to the beam line reference laser. A specially designed alignment fixture is used to mount one straightness interferometer each in the horizontal and vertical plane of the beam. The goal of these procedures is to keep the combined rms trajectory error, due to magnetic and alignment errors, to 50{micro}m.

  5. Computational studies of the x-ray scattering properties of laser aligned stilbene

    SciTech Connect

    Debnarova, Andrea; Techert, Simone; Schmatz, Stefan

    2011-02-07

    The enhancement of the x-ray scattering signal from partially aligned molecular samples is investigated. The alignment properties of the studied molecular system are modeled based on the method of laser alignment. With the advances in the area of laser alignment of molecules, the application of this sample manipulation technique promises a great potential for x-ray scattering measurements. Preferential alignment of molecules in an otherwise amorphous sample leads to constructive interference and thus increases the scattering intensity. This enhances the structural information encoded in the scattering images and enables improved resolution in studies of reaction dynamics, as in this work is shown for the example of the photo-isomerization of stilbene. We demonstrate that the scattering signal is strongly influenced by the alignment axis. Even the most basic one-dimensional alignment offers significant improvement compared to the structural information provided by a randomly oriented sample. Although the signal is sensitive to the uncertainty in the alignment angle, it offers encouraging results even at realistic alignment uncertainties.

  6. B-MIC: An Ultrafast Three-Level Parallel Sequence Aligner Using MIC.

    PubMed

    Cui, Yingbo; Liao, Xiangke; Zhu, Xiaoqian; Wang, Bingqiang; Peng, Shaoliang

    2016-03-01

    Sequence alignment is the central process for sequence analysis, where mapping raw sequencing data to reference genome. The large amount of data generated by NGS is far beyond the process capabilities of existing alignment tools. Consequently, sequence alignment becomes the bottleneck of sequence analysis. Intensive computing power is required to address this challenge. Intel recently announced the MIC coprocessor, which can provide massive computing power. The Tianhe-2 is the world's fastest supercomputer now equipped with three MIC coprocessors each compute node. A key feature of sequence alignment is that different reads are independent. Considering this property, we proposed a MIC-oriented three-level parallelization strategy to speed up BWA, a widely used sequence alignment tool, and developed our ultrafast parallel sequence aligner: B-MIC. B-MIC contains three levels of parallelization: firstly, parallelization of data IO and reads alignment by a three-stage parallel pipeline; secondly, parallelization enabled by MIC coprocessor technology; thirdly, inter-node parallelization implemented by MPI. In this paper, we demonstrate that B-MIC outperforms BWA by a combination of those techniques using Inspur NF5280M server and the Tianhe-2 supercomputer. To the best of our knowledge, B-MIC is the first sequence alignment tool to run on Intel MIC and it can achieve more than fivefold speedup over the original BWA while maintaining the alignment precision. PMID:26358141

  7. Mechanically Oriented, Low-Curie-Temperature Materials

    NASA Technical Reports Server (NTRS)

    Boltich, Edward B.

    1991-01-01

    Proposed fabrication process produces permanent magnets of greater flux density, intended for use at temperatures far below room temperature. Such magnets parts of electrical motors and other electromechanical actuators operating in cryogenic systems. Performances of actuators increase with flux densities available from their magnets. Based on use of mechanical metallurgical techniques to make oriented magnets of Dy3Al2, because these techniques produce alignments above Curie temperature.

  8. Preparation and characterization of aligned carbon nanotubes/polylactic acid composite fibers

    NASA Astrophysics Data System (ADS)

    Kong, Yuxia; Yuan, Jie; Qiu, Jun

    2012-07-01

    Aligned functionalized multiwalled carbon nanotubes/polylactic acid (MWNTs-PCL/PLA) composite fibers were successfully prepared by electrospinning processing. The MWNTs bonded with the polycaprolactone chains exhibited excellent uniform dispersion in PLA solution by comparing with the acid-functionalized MWNTs and amino-functionalized MWNTs. Optical microscopy was used to study the aligned degree of the fibers and to investigate the influences of the electrodes distance on the alignment and structure of the fibers, and results showed that the best quality of aligned fibers with dense structure and high aligned degree were obtained at an electrodes distance of 3 cm. Moreover, the MWNTs embedded inside the MWNTs-PCL/PLA fibers displayed well orientation along the axes of the fibers, which was demonstrated by field emission scanning electron microscopy, transmission electron microscopy and Raman spectroscopy.

  9. A facile method to align carbon nanotubes on polymeric membrane substrate

    PubMed Central

    Zhao, Haiyang; Zhou, Zhijun; Dong, Hang; Zhang, Lin; Chen, Huanlin; Hou, Lian

    2013-01-01

    The alignment of carbon nanotubes (CNT) is the fundamental requirement to ensure their excellent functions but seems to be desolated in recent years. A facile method, hot-press combined with peel-off (HPPO), is introduced here, through which CNT can be successfully vertically aligned on the polymeric membrane substrate. Shear force and mechanical stretch are proposed to be the main forces to align the tubes perpendicular to the substrate surface during the peel-off process. The alignment of CNT keeps its orientation in a thin hybrid membrane by dip-coating cellulose acetate dope solution. It is expected that the stable alignment of CNT by HPPO would contribute to the realization of its potential applications. PMID:24326297

  10. Highly Aligned Poly(vinylidene fluoride-co-hexafluoro propylene) Nanofibers via Electrospinning Technique.

    PubMed

    Han, Tae-Hwan; Nirmala, R; Kim, Tae Woo; Navamathavan, R; Kim, Hak Yong; Park, Soo Jin

    2016-01-01

    We report on the simple way of obtaining aligned poly(vinylidiene fluoride-co-hexafluoropropylene) (PVDF-HFP) nanofibers by electrospinning process. The collector drum rotation speed was adjusted to prepare well aligned PVDF-HFP nanofibers. The degree of alignment and the orientation of PVDF-HFP nanofibers can be significantly altered by varying the speed of collector drum rotation. The resultant PVDF-HFP nanofibers were systematically characterized. From the scanning electron microscopy data, it was found that the electrospun PVDF-HFP nanofibers were formed with well-aligned nature. The X-ray diffraction results revealed that the electrospun PVDF-HFP nanofibers with β-phase can be formed by the increased collector drum rotation speed. Overall, the collector rotation speed during the electrospinning process plays an important role in obtaining well-aligned and improved characteristics of PVDF-HFP nanofibers. PMID:27398493

  11. A facile method to align carbon nanotubes on polymeric membrane substrate

    NASA Astrophysics Data System (ADS)

    Zhao, Haiyang; Zhou, Zhijun; Dong, Hang; Zhang, Lin; Chen, Huanlin; Hou, Lian

    2013-12-01

    The alignment of carbon nanotubes (CNT) is the fundamental requirement to ensure their excellent functions but seems to be desolated in recent years. A facile method, hot-press combined with peel-off (HPPO), is introduced here, through which CNT can be successfully vertically aligned on the polymeric membrane substrate. Shear force and mechanical stretch are proposed to be the main forces to align the tubes perpendicular to the substrate surface during the peel-off process. The alignment of CNT keeps its orientation in a thin hybrid membrane by dip-coating cellulose acetate dope solution. It is expected that the stable alignment of CNT by HPPO would contribute to the realization of its potential applications.

  12. Measurements of magnetic field alignment

    SciTech Connect

    Kuchnir, M.; Schmidt, E.E.

    1987-11-06

    The procedure for installing Superconducting Super Collider (SSC) dipoles in their respective cryostats involves aligning the average direction of their field with the vertical to an accuracy of 0.5 mrad. The equipment developed for carrying on these measurements is described and the measurements performed on the first few prototypes SSC magnets are presented. The field angle as a function of position in these 16.6 m long magnets is a characteristic of the individual magnet with possible feedback information to its manufacturing procedure. A comparison of this vertical alignment characteristic with a magnetic field intensity (by NMR) characteristic for one of the prototypes is also presented. 5 refs., 7 figs.

  13. XUV ionization of aligned molecules

    SciTech Connect

    Kelkensberg, F.; Siu, W.; Gademann, G.; Rouzee, A.; Vrakking, M. J. J.; Johnsson, P.; Lucchini, M.; Lucchese, R. R.

    2011-11-15

    New extreme-ultraviolet (XUV) light sources such as high-order-harmonic generation (HHG) and free-electron lasers (FELs), combined with laser-induced alignment techniques, enable novel methods for making molecular movies based on measuring molecular frame photoelectron angular distributions. Experiments are presented where CO{sub 2} molecules were impulsively aligned using a near-infrared laser and ionized using femtosecond XUV pulses obtained by HHG. Measured electron angular distributions reveal contributions from four orbitals and the onset of the influence of the molecular structure.

  14. Alignment Tool For Inertia Welding

    NASA Technical Reports Server (NTRS)

    Snyder, Gary L.

    1991-01-01

    Compact, easy-to-use tool aligns drive bar of inertia welder over hole in stub. Ensures drive bar concentric to hole within 0.002 in. (0.051 mm.). Holds two batteries and light bulb. Electrical circuit completed, providing current to bulb when pin in contact with post. When pin centered in post hole, it does not touch post, and lamp turns off. Built for use in making repair welds on liquid-oxygen-injector posts in Space Shuttle main engine. Version having suitably modified dimensions used to facilitate alignment in other forests of post.

  15. The alignment-distribution graph

    NASA Technical Reports Server (NTRS)

    Chatterjee, Siddhartha; Gilbert, John R.; Schreiber, Robert

    1993-01-01

    Implementing a data-parallel language such as Fortran 90 on a distributed-memory parallel computer requires distributing aggregate data objects (such as arrays) among the memory modules attached to the processors. The mapping of objects to the machine determines the amount of residual communication needed to bring operands of parallel operations into alignment with each other. We present a program representation called the alignment distribution graph that makes these communication requirements explicit. We describe the details of the representation, show how to model communication cost in this framework, and outline several algorithms for determining object mappings that approximately minimize residual communication.

  16. The alignment-distribution graph

    NASA Technical Reports Server (NTRS)

    Chatterjee, Siddhartha; Gilbert, John R.; Schreiber, Robert

    1993-01-01

    Implementing a data-parallel language such as Fortran 90 on a distributed-memory parallel computer requires distributing aggregate data objects (such as arrays) among the memory modules attached to the processors. The mapping of objects to the machine determines the amount of residual communication needed to bring operands of parallel operations into alignment with each other. We present a program representation called the alignment-distribution graph that makes these communication requirements explicit. We describe the details of the representation, show how to model communication cost in this framework, and outline several algorithms for determining object mappings that approximately minimize residual communication.

  17. Epitaxial growth of aligned AlGalnN nanowires by metal-organic chemical vapor deposition

    DOEpatents

    Han, Jung; Su, Jie

    2008-08-05

    Highly ordered and aligned epitaxy of III-Nitride nanowires is demonstrated in this work. <1010> M-axis is identified as a preferential nanowire growth direction through a detailed study of GaN/AlN trunk/branch nanostructures by transmission electron microscopy. Crystallographic selectivity can be used to achieve spatial and orientational control of nanowire growth. Vertically aligned (Al)GaN nanowires are prepared on M-plane AlN substrates. Horizontally ordered nanowires, extending from the M-plane sidewalls of GaN hexagonal mesas or islands demonstrate new opportunities for self-aligned nanowire devices, interconnects, and networks.

  18. Liquid crystal surface alignments by using ion beam sputtered magnetic thin films

    SciTech Connect

    Wu, H.-Y.; Pan, R.-P.

    2007-08-13

    A method for liquid crystal surface alignment by using a one-step, ion beam bombardment of the glass substrates is demonstrated. Precoating by polyimide is not necessary. The authors show that the homeotropic alignment is achieved due to orientation of the diamagnetic nematogenic molecules by the magnetic field from the {gamma}-Fe{sub 2}O{sub 3} ferrimagnetic thin films created on the substrates by ion beam bombardment. The film exhibits a high Curie temperature well above 300 K and a compensation temperature which is the typical feature of ferrimagnetism. This is a simple, noncontact, and reliable alignment method for liquid crystal devices.

  19. Defect-Tolerant Aligned Dipoles within Two-Dimensional Plastic Lattices.

    PubMed

    Thomas, John C; Schwartz, Jeffrey J; Hohman, J Nathan; Claridge, Shelley A; Auluck, Harsharn S; Serino, Andrew C; Spokoyny, Alexander M; Tran, Giang; Kelly, Kevin F; Mirkin, Chad A; Gilles, Jerome; Osher, Stanley J; Weiss, Paul S

    2015-05-26

    Carboranethiol molecules self-assemble into upright molecular monolayers on Au{111} with aligned dipoles in two dimensions. The positions and offsets of each molecule's geometric apex and local dipole moment are measured and correlated with sub-Ångström precision. Juxtaposing simultaneously acquired images, we observe monodirectional offsets between the molecular apexes and dipole extrema. We determine dipole orientations using efficient new image analysis techniques and find aligned dipoles to be highly defect tolerant, crossing molecular domain boundaries and substrate step edges. The alignment observed, consistent with Monte Carlo simulations, forms through favorable intermolecular dipole-dipole interactions. PMID:25867638

  20. A Highly Permeable Aligned Montmorillonite Mixed-Matrix Membrane for CO2 Separation.

    PubMed

    Qiao, Zhihua; Zhao, Song; Wang, Jixiao; Wang, Shichang; Wang, Zhi; Guiver, Michael D

    2016-08-01

    Highly permeable montmorillonite layers bonded and aligned with the chain stretching orientation of polyvinylamineacid are immobilized onto a porous polysulfone substrate to fabricate aligned montmorillonite/polysulfone mixed-matrix membranes for CO2 separation. High-speed gas-transport channels are formed by the aligned interlayer gaps of the modified montmorillonite, through which CO2 transport primarily occurs. High CO2 permeance of about 800 GPU is achieved combined with a high mixed-gas selectivity for CO2 that is stable over a period of 600 h and independent of the water content in the feed. PMID:27312314