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Sample records for alignment angle error

  1. Compensation method for the alignment angle error of a gear axis in profile deviation measurement

    NASA Astrophysics Data System (ADS)

    Fang, Suping; Liu, Yongsheng; Wang, Huiyi; Taguchi, Tetsuya; Takeda, Ryuhei

    2013-05-01

    In the precision measurement of involute helical gears, the alignment angle error of a gear axis, which was caused by the assembly error of a gear measuring machine, will affect the measurement accuracy of profile deviation. A model of the involute helical gear is established under the condition that the alignment angle error of the gear axis exists. Based on the measurement theory of profile deviation, without changing the initial measurement method and data process of the gear measuring machine, a compensation method is proposed for the alignment angle error of the gear axis that is included in profile deviation measurement results. Using this method, the alignment angle error of the gear axis can be compensated for precisely. Some experiments that compare the residual alignment angle error of a gear axis after compensation for the initial alignment angle error were performed to verify the accuracy and feasibility of this method. Experimental results show that the residual alignment angle error of a gear axis included in the profile deviation measurement results is decreased by more than 85% after compensation, and this compensation method significantly improves the measurement accuracy of the profile deviation of involute helical gear.

  2. Littrow angle method to remove alignment errors in grating pulse compressors.

    PubMed

    Guardalben, M J

    2008-09-20

    An alignment method for pulse-compression gratings that obviates the need to place the gratings at normal incidence to remove grating-tip error is proposed. Grating-tip and groove-orientation errors are removed using two alignment wavelengths in a manner analogous to a laser-beam pointing and centering procedure entirely at the respective Littrow angles for the two wavelengths. By choosing wavelengths with Littrow angles close to the use angle of the grating, the residual tip and groove-orientation errors that may be introduced when the grating mount is tilted to its use angle are reduced. This method has greatly facilitated the alignment of the OMEGA Extended Performance (EP) large-aperture pulse compressors, thereby reducing residual pulse-front tilt caused by nonparallel gratings. OMEGA EP is a high-energy, petawatt-class laser at the University of Rochester's Laboratory for Laser Energetics. A numerical simulation of the alignment procedure is presented. PMID:18806858

  3. Littrow Angle Method to Remove Alignment Errors in Grating Pulse Compressors

    SciTech Connect

    Guardalben, M.J.

    2008-09-16

    An alignment method for pulse-compression gratings that obviates the need to place the gratings at normal incidence to remove grating-tip error is proposed. Grating-tip and groove-orientation errors are removed using two alignment wavelengths in a manner analogous to a laser-beam pointing and centering procedure entirely at the respective Littrow angles for the two wavelengths. By choosing wavelengths with Littrow angles close to the use angle of the grating, the residual tip and groove-orientation errors that may be introduced when the grating mount is tilted to its use angle are reduced. This method has greatly facilitated the alignment of the OMEGA Extended Performance (EP) large-aperture pulse compressors, thereby reducing residual pulse-front tilt caused by nonparallel gratings. OMEGA EP is a highenergy, petawatt-class laser at the University of Rochester’s Laboratory for Laser Energetics. A numerical simulation of the alignment procedure is presented.

  4. Littrow angle method to remove alignment errors in grating pulse compressors

    SciTech Connect

    Guardalben, M. J

    2008-09-20

    An alignment method for pulse-compression gratings that obviates the need to place the gratings at normal incidence to remove grating-tip error is proposed. Grating-tip and groove-orientation errors are removed using two alignment wavelengths in a manner analogous to a laser-beam pointing and centering procedure entirely at the respective Littrow angles for the two wavelengths. By choosing wavelengths with Littrow angles close to the use angle of the grating, the residual tip and groove-orientation errors that may be introduced when the grating mount is tilted to its use angle are reduced. This method has greatly facilitated the alignment of the OMEGA Extended Performance (EP) large-aperture pulse compressors, thereby reducing residual pulse-front tilt caused by nonparallel gratings. OMEGA EP is a high-energy, petawatt-class laser at the University of Rochester's Laboratory for Laser Energetics. A numerical simulation of the alignment procedure is presented.

  5. Compensation method for the alignment angle error in pitch deviation measurement

    NASA Astrophysics Data System (ADS)

    Liu, Yongsheng; Fang, Suping; Wang, Huiyi; Taguchi, Tetsuya; Takeda, Ryohei

    2016-05-01

    When measuring the tooth flank of an involute helical gear by gear measuring center (GMC), the alignment angle error of a gear axis, which was caused by the assembly error and manufacturing error of the GMC, will affect the measurement accuracy of pitch deviation of the gear tooth flank. Based on the model of the involute helical gear and the tooth flank measurement theory, a method is proposed to compensate the alignment angle error that is included in the measurement results of pitch deviation, without changing the initial measurement method of the GMC. Simulation experiments are done to verify the compensation method and the results show that after compensation, the alignment angle error of the gear axis included in measurement results of pitch deviation declines significantly, more than 90% of the alignment angle errors are compensated, and the residual alignment angle errors in pitch deviation measurement results are less than 0.1 μm. It shows that the proposed method can improve the measurement accuracy of the GMC when measuring the pitch deviation of involute helical gear.

  6. Onorbit IMU alignment error budget

    NASA Technical Reports Server (NTRS)

    Corson, R. W.

    1980-01-01

    The Star Tracker, Crew Optical Alignment Sight (COAS), and Inertial Measurement Unit (IMU) from a complex navigation system with a multitude of error sources were combined. A complete list of the system errors is presented. The errors were combined in a rational way to yield an estimate of the IMU alignment accuracy for STS-1. The expected standard deviation in the IMU alignment error for STS-1 type alignments was determined to be 72 arc seconds per axis for star tracker alignments and 188 arc seconds per axis for COAS alignments. These estimates are based on current knowledge of the star tracker, COAS, IMU, and navigation base error specifications, and were partially verified by preliminary Monte Carlo analysis.

  7. Shuttle orbit IMU alignment. Single-precision computation error

    NASA Technical Reports Server (NTRS)

    Mcclain, C. R.

    1980-01-01

    The source of computational error in the inertial measurement unit (IMU) onorbit alignment software was investigated. Simulation runs were made on the IBM 360/70 computer with the IMU orbit alignment software coded in hal/s. The results indicate that for small IMU misalignment angles (less than 600 arc seconds), single precision computations in combination with the arc cosine method of eigen rotation angle extraction introduces an additional misalignment error of up to 230 arc seconds per axis. Use of the arc sine method, however, produced negligible misalignment error. As a result of this study, the arc sine method was recommended for use in the IMU onorbit alignment software.

  8. PROCESSING AND ANALYSIS OF THE MEASURED ALIGNMENT ERRORS FOR RHIC.

    SciTech Connect

    PILAT,F.; HEMMER,M.; PTITSIN,V.; TEPIKIAN,S.; TRBOJEVIC,D.

    1999-03-29

    All elements of the Relativistic Heavy Ion Collider (RHIC) have been installed in ideal survey locations, which are defined as the optimum locations of the fiducials with respect to the positions generated by the design. The alignment process included the presurvey of all elements which could affect the beams. During this procedure a special attention was paid to the precise determination of the quadrupole centers as well as the roll angles of the quadrupoles and dipoles. After installation the machine has been surveyed and the resulting as-built measured position of the fiducials have been stored and structured in the survey database. We describe how the alignment errors, inferred by comparison of ideal and as-built data, have been processed and analyzed by including them in the RHIC modeling software. The RHIC model, which also includes individual measured errors for all magnets in the machine and is automatically generated from databases, allows the study of the impact of the measured alignment errors on the machine.

  9. Polar transfer alignment of shipborne SINS with a large misalignment angle

    NASA Astrophysics Data System (ADS)

    Cheng, Jianhua; Wang, Tongda; Guan, Dongxue; Li, Meiling

    2016-03-01

    Existing polar transfer alignment (TA) algorithms are designed based on linear Kalman filters (KF) to estimate misalignment angles. In the case of a large misalignment angle, these algorithms cannot be applied in order to achieve accurate TA. In this paper, a TA algorithm based on an unscented Kalman filter (UKF) is proposed to solve the problem of the large misalignment angle in the polar region. Based on a large misalignment angle, nonlinear navigation error equations, which are the UKF dynamic models, are derived under grid frames. This paper chooses the velocity plus attitude matching method as the TA matching method and errors of velocity and attitude as observations. The misalignment angle can be estimated by the designed UKF. The simulation results have demonstrated that the polar TA algorithm can be effective in improving the TA accuracy, especially when large misalignment angles occur.

  10. AXAF Alignment Test System Autocollimating Flat Error Correction

    NASA Technical Reports Server (NTRS)

    Lewis, Timothy S.

    1995-01-01

    The alignment test system for the advanced x ray astrophysics facility (AXAF) high-resolution mirror assembly (HRMA) determines the misalignment of the HRMA by measuring the displacement of a beam of light reflected by the HRMA mirrors and an autocollimating flat (ACF). This report shows how to calibrate the system to compensate for errors introduced by the ACF, using measurements taken with the ACF in different positions. It also shows what information can be obtained from alignment test data regarding errors in the shapes of the HRMA mirrors. Simulated results based on measured ACF surface data are presented.

  11. Analysis on the alignment errors of segmented Fresnel lens

    NASA Astrophysics Data System (ADS)

    Zhou, Xudong; Wu, Shibin; Yang, Wei; Wang, Lihua

    2014-09-01

    Stitching Fresnel lens are designed for the application in the micro-focus X-ray, but splicing errors between sub-apertures will affect optical performance of the entire mirror. The offset error tolerance of different degrees of freedom between the sub-apertures are analyzed theoretically according to the wave-front aberration theory and with the Rayleigh criterion as evaluation criteria, and then validate the correctness of the theory using simulation software of ZEMAX. The results show that Z-axis piston error tolerance and translation error tolerance of XY axis increases with the increasing F-number of stitching Fresnel lens, and tilt error tolerance of XY axis decreases with increasing diameter. The results provide a theoretical basis and guidance for the design, detection and alignment of stitching Fresnel lens.

  12. Alignment error analysis of the snapshot imaging polarimeter.

    PubMed

    Liu, Zhen; Yang, Wei-Feng; Ye, Qing-Hao; Hong, Jin; Gong, Guan-Yuan; Zheng, Xiao-Bing

    2016-03-10

    A snapshot imaging polarimeter (SIP) system is able to reconstruct two-dimensional spatial polarization information through a single interferogram. In this system, the alignment errors of the half-wave plate (HWP) and the analyzer have a predominant impact on the accuracies of reconstructed complete Stokes parameters. A theoretical model for analyzing the alignment errors in the SIP system is presented in this paper. Based on this model, the accuracy of the reconstructed Stokes parameters has been evaluated by using different incident states of polarization. An optimum thickness of the Savart plate for alleviating the perturbation introduced by the alignment error of the HWP is found by using the condition number of the system measurement matrix as an objective function in a minimization procedure. The result shows that when the thickness of a Savart plate is 23 mm, corresponding to the condition number 2.06, the precision of the SIP system can reach to 0.21% at 1° alignment tolerance of the HWP. PMID:26974785

  13. Initial Alignment of Large Azimuth Misalignment Angles in SINS Based on Adaptive UPF

    PubMed Central

    Sun, Jin; Xu, Xiao-Su; Liu, Yi-Ting; Zhang, Tao; Li, Yao

    2015-01-01

    The case of large azimuth misalignment angles in a strapdown inertial navigation system (SINS) is analyzed, and a method of using the adaptive UPF for the initial alignment is proposed. The filter is based on the idea of a strong tracking filter; through the introduction of the attenuation memory factor to effectively enhance the corrections of the current information residual error on the system, it reduces the influence on the system due to the system simplification, and the uncertainty of noise statistical properties to a certain extent; meanwhile, the UPF particle degradation phenomenon is better overcome. Finally, two kinds of non-linear filters, UPF and adaptive UPF, are adopted in the initial alignment of large azimuth misalignment angles in SINS, and the filtering effects of the two kinds of nonlinear filter on the initial alignment were compared by simulation and turntable experiments. The simulation and turntable experiment results show that the speed and precision of the initial alignment using adaptive UPF for a large azimuth misalignment angle in SINS under the circumstance that the statistical properties of the system noise are certain or not have been improved to some extent. PMID:26334277

  14. Initial Alignment of Large Azimuth Misalignment Angles in SINS Based on Adaptive UPF.

    PubMed

    Sun, Jin; Xu, Xiao-Su; Liu, Yi-Ting; Zhang, Tao; Li, Yao

    2015-01-01

    The case of large azimuth misalignment angles in a strapdown inertial navigation system (SINS) is analyzed, and a method of using the adaptive UPF for the initial alignment is proposed. The filter is based on the idea of a strong tracking filter; through the introduction of the attenuation memory factor to effectively enhance the corrections of the current information residual error on the system, it reduces the influence on the system due to the system simplification, and the uncertainty of noise statistical properties to a certain extent; meanwhile, the UPF particle degradation phenomenon is better overcome. Finally, two kinds of non-linear filters, UPF and adaptive UPF, are adopted in the initial alignment of large azimuth misalignment angles in SINS, and the filtering effects of the two kinds of nonlinear filter on the initial alignment were compared by simulation and turntable experiments. The simulation and turntable experiment results show that the speed and precision of the initial alignment using adaptive UPF for a large azimuth misalignment angle in SINS under the circumstance that the statistical properties of the system noise are certain or not have been improved to some extent. PMID:26334277

  15. Ultrasonic anemometer angle of attack errors under turbulent conditions

    NASA Astrophysics Data System (ADS)

    Nakai, T.

    2009-12-01

    Measurements of eddy fluxes are premised on the assumption that wind speeds are measured accurately by an ultrasonic anemometer. Recently, ultrasonic anemometers have been shown to suffer errors depending on the angle of attack, which is the angle between the wind vector and the horizontal. The correction of these errors resulted in general increases in eddy fluxes. However, since the check of the angle of attack dependent error was carried out in the wind tunnel experiment, which would be under the condition of nearly laminar flow, the applicability of this correction to the field data under turbulent conditions has been questioned. In this study, angle of attack dependencies of wind speeds measured by Gill Windmaster ultrasonic anemometers were assessed by field experiment over meadow, considered to be turbulent conditions. By using five identical anemometers, two pairs of systems were prepared: two anemometers for references and one between them for tilt. The dependencies of (co)sine responses of anemometers on angles of attack of 0 to -90 degrees in 10-degree steps and 45 degrees were checked, and clarified that the angle of attack dependent errors occur also under turbulent conditions, with results similar to the wind tunnel experiments. Sine responses of vertical wind speeds depended not only on vertical angle of attack but also on horizontal wind direction, which had not been considered in previous studies. For more robust correction, alternative calibration functions were obtained empirically so as to reasonably explain our field experimental results. Applying this new correction, eddy fluxes increased substantially even over meadow, which is somewhat aerodynamically smooth compared with forests or agricultural fields.

  16. Mitigation of Angle Tracking Errors Due to Color Dependent Centroid Shifts in SIM-Lite

    NASA Technical Reports Server (NTRS)

    Nemati, Bijan; An, Xin; Goullioud, Renaud; Shao, Michael; Shen, Tsae-Pyng; Wehmeier, Udo J.; Weilert, Mark A.; Wang, Xu; Werne, Thomas A.; Wu, Janet P.; Zhai, Chengxing

    2010-01-01

    The SIM-Lite astrometric interferometer will search for Earth-size planets in the habitable zones of nearby stars. In this search the interferometer will monitor the astrometric position of candidate stars relative to nearby reference stars over the course of a 5 year mission. The elemental measurement is the angle between a target star and a reference star. This is a two-step process, in which the interferometer will each time need to use its controllable optics to align the starlight in the two arms with each other and with the metrology beams. The sensor for this alignment is an angle tracking CCD camera. Various constraints in the design of the camera subject it to systematic alignment errors when observing a star of one spectrum compared with a start of a different spectrum. This effect is called a Color Dependent Centroid Shift (CDCS) and has been studied extensively with SIM-Lite's SCDU testbed. Here we describe results from the simulation and testing of this error in the SCDU testbed, as well as effective ways that it can be reduced to acceptable levels.

  17. Bounding the error on bottom estimation for multi-angle swath bathymetry sonar

    NASA Astrophysics Data System (ADS)

    Mullins, Geoff K.; Bird, John S.

    2005-04-01

    With the recent introduction of multi-angle swath bathymetry (MASB) sonar to the commercial marketplace (e.g., Benthos Inc., C3D sonar, 2004), additions must be made to the current sonar lexicon. The correct interpretation of measurements made with MASB sonar, which uses filled transducer arrays to compute angle-of-arrival information (AOA) from backscattered signal, is essential not only for mapping, but for applications such as statistical bottom classification. In this paper it is shown that aside from uncorrelated channel to channel noise, there exists a tradeoff between effects that govern the error bounds on bottom estimation for surfaces having shallow grazing angle and surfaces distributed along a radial arc centered at the transducer. In the first case, as the bottom aligns with the radial direction to the receiver, footprint shift and shallow grazing angle effects dominate the uncertainty in physical bottom position (surface aligns along a single AOA). Alternatively, if signal from a radial arc arrives, a single AOA is usually estimated (not necessarily at the average location of the surface). Through theoretical treatment, simulation, and field measurements, the aforementioned factors affecting MASB bottom mapping are examined. [Work supported by NSERC.

  18. Starlight emergence angle error analysis of star simulator

    NASA Astrophysics Data System (ADS)

    Zhang, Jian; Zhang, Guo-yu

    2015-10-01

    With continuous development of the key technologies of star sensor, the precision of star simulator have been to be further improved, for it directly affects the accuracy of star sensor laboratory calibration. For improving the accuracy level of the star simulator, a theoretical accuracy analysis model need to be proposed. According the ideal imaging model of star simulator, the theoretical accuracy analysis model can be established. Based on theoretically analyzing the theoretical accuracy analysis model we can get that the starlight emergent angle deviation is primarily affected by star position deviation, main point position deviation, focal length deviation, distortion deviation and object plane tilt deviation. Based on the above affecting factors, a comprehensive deviation model can be established. According to the model, the formula of each factors deviation model separately and the comprehensive deviation model can be summarized and concluded out. By analyzing the properties of each factors deviation model and the comprehensive deviation model formula, concluding the characteristics of each factors respectively and the weight relationship among them. According the result of analysis of the comprehensive deviation model, a reasonable designing indexes can be given by considering the star simulator optical system requirements and the precision of machining and adjustment. So, starlight emergence angle error analysis of star simulator is very significant to guide the direction of determining and demonstrating the index of star simulator, analyzing and compensating the error of star simulator for improving the accuracy of star simulator and establishing a theoretical basis for further improving the starlight angle precision of the star simulator can effectively solve the problem.

  19. Influence of alignment errors on contact pressure during straight bevel gear meshing process

    NASA Astrophysics Data System (ADS)

    Han, Xinghui; Hua, Lin; Deng, Song; Luo, Qiuping

    2015-11-01

    Straight bevel gears are widely applied in automotive, aerospace, chemical and many other fields as one of the most common type of gears. Currently, the researches on straight bevel gears have focused on the fields of fatigue, wear, noise and vibration, while little attention is paid to the effect of multiple alignment errors on the gear tooth wear. To study the influence of alignment errors on the gear tooth wear, a simulated model of a straight bevel gear pair is established. Then, the contact pressure on the tooth surface is analyzed under the various alignment errors according to the Archard wear relationship. The main combinations of alignment errors played vital roles on the tooth wear are investigated. The result shows that under the single alignment error, the contact pressure moves to the tooth heel and increases greatly at here when Δ P=0.1 or Δ G=0.1; when Δ E=-0.03, the contact pressure greatly increases at the tooth heel, but it obviously increases at the tooth toe when Δ E=0.03; the alignment error Δ γ=1 has little effect on the contact pressure on the tooth surface. Moreover, the combination of Δ P, Δ G, Δ E<0 and Δ γ is the most dangerous type among the multiple alignment errors. This research provides valuable guidelines for predicting the tooth wear under various alignment errors.

  20. Magnetic prism alignment system for measuring large-angle strabismus.

    PubMed

    Bishop, John Edward

    2014-02-01

    Prismatic measurement of large-angle strabismus requires the simultaneous use of two or more prisms for neutralization. To facilitate the clinical measurement of large-angle strabismus a new prism system was designed utilizing a flat plate and a ferrous metal surface coupled with prisms containing rare earth magnets implanted in their base and bottom surfaces. PMID:24569000

  1. Fuzzy adaptive strong tracking scaled unscented Kalman filter for initial alignment of large misalignment angles.

    PubMed

    Li, Jing; Song, Ningfang; Yang, Gongliu; Jiang, Rui

    2016-07-01

    In the initial alignment process of strapdown inertial navigation system (SINS), large misalignment angles always bring nonlinear problem, which can usually be processed using the scaled unscented Kalman filter (SUKF). In this paper, the problem of large misalignment angles in SINS alignment is further investigated, and the strong tracking scaled unscented Kalman filter (STSUKF) is proposed with fixed parameters to improve convergence speed, while these parameters are artificially constructed and uncertain in real application. To further improve the alignment stability and reduce the parameters selection, this paper proposes a fuzzy adaptive strategy combined with STSUKF (FUZZY-STSUKF). As a result, initial alignment scheme of large misalignment angles based on FUZZY-STSUKF is designed and verified by simulations and turntable experiment. The results show that the scheme improves the accuracy and convergence speed of SINS initial alignment compared with those based on SUKF and STSUKF. PMID:27475606

  2. Fuzzy adaptive strong tracking scaled unscented Kalman filter for initial alignment of large misalignment angles

    NASA Astrophysics Data System (ADS)

    Li, Jing; Song, Ningfang; Yang, Gongliu; Jiang, Rui

    2016-07-01

    In the initial alignment process of strapdown inertial navigation system (SINS), large misalignment angles always bring nonlinear problem, which can usually be processed using the scaled unscented Kalman filter (SUKF). In this paper, the problem of large misalignment angles in SINS alignment is further investigated, and the strong tracking scaled unscented Kalman filter (STSUKF) is proposed with fixed parameters to improve convergence speed, while these parameters are artificially constructed and uncertain in real application. To further improve the alignment stability and reduce the parameters selection, this paper proposes a fuzzy adaptive strategy combined with STSUKF (FUZZY-STSUKF). As a result, initial alignment scheme of large misalignment angles based on FUZZY-STSUKF is designed and verified by simulations and turntable experiment. The results show that the scheme improves the accuracy and convergence speed of SINS initial alignment compared with those based on SUKF and STSUKF.

  3. Optical properties of hybrid aligned nematic cells with different pretilt angles.

    PubMed

    Belyaev, Victor V; Solomatin, Alexey S; Kurilov, Alexander D; Chausov, Denis N; Mazaeva, Vera G; Shoshin, Vadim M; Bobylev, Yuri P

    2014-10-10

    The phase retardation difference, ΔΦ, is calculated for hybrid liquid crystal (LC) cells as a function of LC pretilt angles, θ0(1), θ0(2), on the opposite substrates of the cell for the case of an arbitrary angle of light incidence in the range from 0 to 90°. An LC director configuration is suggested for its application in optical compensators. Design and fabrication methods of hybrid aligned nematic (HAN) cells with an arbitrary LC pretilt angle are described. The LC pretilt angle is measured in the HAN cells with a given planar or vertical LC alignment on one of the substrates. PMID:25322431

  4. Contact-angle measurements as a means of probing the surface alignment characteristics of liquid crystal materials on photoalignment layers

    NASA Astrophysics Data System (ADS)

    Marshall, K. L.; Didovets, O.; Saulnier, D.

    2014-10-01

    The exceptionally high 1054-nm laser-damage resistance of photoalignment materials (approaching that of fused silica) has made it possible to fabricate a wide variety of photoaligned liquid crystal (LC) devices for high-peak-power laser applications. Despite these advances, materials selection and photoalignment exposure conditions are still determined using costly and time-consuming "trial-and-error" methods. The contact angle of a fluid droplet on an alignment layer yields important information about LC-surface physicochemical interactions, and as such, it has potential as a rapid and convenient metric for optimizing photoaligned device quality. To this end, we report on efforts to correlate fluid contact angle with surface energy and azimuthal-anchoring energy to aid in the assessment of alignment quality in photoalignment materials systems.

  5. Influence of alignment error and random noise on interferometry flat sub-aperture stitching

    NASA Astrophysics Data System (ADS)

    Deng, Wantao; Wang, Kaiwei; Zhang, Jinchun

    2012-10-01

    In the flat sub-aperture stitching test, the dominant e error comes from two dimensional translation stage that carries the flat under test, which contains tilt and position error i.e., the alignment error. In order to analyze the influence of alignment error on stitching precision, we use Zemax optical software to simulate a system to detect the phase of each sub-aperture of measured flat and add tilt and position errors and random noise to sub-apertures. The simulation model was utilized in this paper to evaluate the mechanical precision of the translation stage in order to meet a required stitching precision of 1/1000λ.

  6. Angle-resolved reflectance of obliquely aligned silver nanorods.

    PubMed

    Wang, X J; Abell, J L; Zhao, Y-P; Zhang, Z M

    2012-04-01

    Arrays of silver nanorods (AgNRs) formed by oblique-angle deposition (OAD) are strongly anisotropic, with either metallic or dielectric characteristics depending on the polarization of incident light, and may be used to enhance Raman scattering and surface plasmon polaritons. This work investigates the polarization-dependent reflectance of inclined AgNR arrays at the wavelengths of 635 and 977 nm. The specular reflectance at various incidence angles and the bidirectional reflectance distribution function were measured with a laser scatterometer, while the directional-hemispherical reflectance was measured with an integrating sphere. The AgNR layer is modeled as an effectively homogenous, optically uniaxial material using the effective medium theory to elucidate the dielectric or metallic response for differently polarized incidence. The thin-film optics formulation is modified considering optical anisotropy and surface scattering. This study helps gain a better understanding of optical properties of nanostructured materials. PMID:22505070

  7. Controlling pre-tilt angles of liquid crystal using mixed polyimide alignment layer.

    PubMed

    Wu, Wei-Yen; Wang, Chen-Chen; Fuh, Andy Y

    2008-10-13

    Three approaches to controlling liquid crystal (LC) pre-tilt angle in a cell are demonstrated using a polyimide (PI) alignment layer on substrates, in the form of a mixture of horizontal (H) and vertical (V) polyimides. The concentration ratio of H- to V-PI, baking temperature, and rubbing strength influence the pre-tilt angle, and highlight parameters for controlling the pre-tilt angle of an LC cell. Finally, a variable polarization converter is demonstrated using this approach. PMID:18852824

  8. SU-E-T-195: Gantry Angle Dependency of MLC Leaf Position Error

    SciTech Connect

    Ju, S; Hong, C; Kim, M; Chung, K; Kim, J; Han, Y; Ahn, S; Chung, S; Shin, E; Shin, J; Kim, H; Kim, D; Choi, D

    2014-06-01

    Purpose: The aim of this study was to investigate the gantry angle dependency of the multileaf collimator (MLC) leaf position error. Methods: An automatic MLC quality assurance system (AutoMLCQA) was developed to evaluate the gantry angle dependency of the MLC leaf position error using an electronic portal imaging device (EPID). To eliminate the EPID position error due to gantry rotation, we designed a reference maker (RM) that could be inserted into the wedge mount. After setting up the EPID, a reference image was taken of the RM using an open field. Next, an EPID-based picket-fence test (PFT) was performed without the RM. These procedures were repeated at every 45° intervals of the gantry angle. A total of eight reference images and PFT image sets were analyzed using in-house software. The average MLC leaf position error was calculated at five pickets (-10, -5, 0, 5, and 10 cm) in accordance with general PFT guidelines using in-house software. This test was carried out for four linear accelerators. Results: The average MLC leaf position errors were within the set criterion of <1 mm (actual errors ranged from -0.7 to 0.8 mm) for all gantry angles, but significant gantry angle dependency was observed in all machines. The error was smaller at a gantry angle of 0° but increased toward the positive direction with gantry angle increments in the clockwise direction. The error reached a maximum value at a gantry angle of 90° and then gradually decreased until 180°. In the counter-clockwise rotation of the gantry, the same pattern of error was observed but the error increased in the negative direction. Conclusion: The AutoMLCQA system was useful to evaluate the MLC leaf position error for various gantry angles without the EPID position error. The Gantry angle dependency should be considered during MLC leaf position error analysis.

  9. Error estimation for delta VLBI angle and angle rate measurements over baselines between a ground station and a geosynchronous orbiter

    NASA Technical Reports Server (NTRS)

    Wu, S. C.

    1982-01-01

    Baselines between a ground station and a geosynchronous orbiter provide high resolution Delta VLBI data which is beyond the capability of ground-based interferometry. The effects of possible error sources on such Delta VLBI data for the determination of spacecraft angle and angle rate are investigated. For comparison, the effects on spacecraft-only VLBI are also studied.

  10. Liquid crystal pretilt angle control using adjustable wetting properties of alignment layers

    SciTech Connect

    Ahn, Han Jin; Kim, Jong Bok; Kim, Kyung Chan; Hwang, Byoung Har; Kim, Jong Tae; Baik, Hong Koo; Park, Jin Seol; Kang, Daeseung

    2007-06-18

    The authors demonstrate the production of amorphous fluorinated carbon (a-C:F) thin film with adjustable wetting properties, inducing variable liquid crystal (LC) pretilt angles. To control the surface wetting properties, they apply a dual radio frequency magnetron system with a controlled power ratio of targets. In this manner we obtain various compositional surfaces with fluorine and carbon components and adjust the surface energy with regard to the various compositions. Whereas the fluorine-rich a-C:F layer shows a preference for homeotropic (vertical) LC alignment, the carbon-rich a-C:F layer shows a planar LC alignment. To achieve uniform LC alignment with a proper pretilt angle, an accelerated Ar{sup +} ion beam irradiates the films after the deposition process. The ion beam selectively destroys the surface bonding of the a-C:F films, yielding an intermediate pretilt angle.

  11. Alignment of high resolution magic angle spinning magnetic resonance spectra using warping methods.

    PubMed

    Giskeødegård, Guro F; Bloemberg, Tom G; Postma, Geert; Sitter, Beathe; Tessem, May-Britt; Gribbestad, Ingrid S; Bathen, Tone F; Buydens, Lutgarde M C

    2010-12-17

    The peaks of magnetic resonance (MR) spectra can be shifted due to variations in physiological and experimental conditions, and correcting for misaligned peaks is an important part of data processing prior to multivariate analysis. In this paper, five warping algorithms (icoshift, COW, fastpa, VPdtw and PTW) are compared for their feasibility in aligning spectral peaks in three sets of high resolution magic angle spinning (HR-MAS) MR spectra with different degrees of misalignments, and their merits are discussed. In addition, extraction of information that might be present in the shifts is examined, both for simulated data and the real MR spectra. The generic evaluation methodology employs a number of frequently used quality criteria for evaluation of the alignments, together with PLS-DA to assess the influence of alignment on the classification outcome. Peak alignment greatly improved the internal similarity of the data sets. Especially icoshift and COW seem suitable for aligning HR-MAS MR spectra, possibly because they perform alignment segment-wise. The choice of reference spectrum can influence the alignment result, and it is advisable to test several references. Information from the peak shifts was extracted, and in one case cancer samples were successfully discriminated from normal tissue based on shift information only. Based on these findings, general recommendations for alignment of HR-MAS MRS data are presented. Where possible, observations are generalized to other data types (e.g. chromatographic data). PMID:21094376

  12. Improved liquid crystal pretilt angles by patterned dual alignment coating structures.

    PubMed

    Wu, G M; Chien, H W; Chen, C N; Lin, C Y; Huang, J A; Zeng, H L

    2010-07-01

    The pretilt angles for the optically compensated bend (OCB) mode liquid crystals have been improved using novel patterned dual alignment coating structures in this study. The transition from the splay configuration to the bend configuration can thus be effectively reduced. The dual alignment coating structures consisted of a horizontal alignment polyimide (PI) and a patterned vertical alignment liquid crystal polymer (LCP). Three patterning masks were designed for the photolithography process. The pretilt angles were demonstrated to be increased to 34 degrees for the triangle lattice array-patterned cells. It became 31 degrees for the square lattice array-patterned cells, and 24 degrees for the honeycomb lattice array-patterned cells. The improved pretilt angles were illustrated by the force balance model that can be predicted by the LCP area ratio. The effective control over the pretilt angle could improve the response time to 2 ms when the voltage was ramped up to 5.5 V for the OCB mode liquid crystal devices. PMID:21128462

  13. Elevation angle alignment of quasi optical receiver mirrors of collective Thomson scattering diagnostic by sawtooth measurements

    SciTech Connect

    Moseev, D.; Meo, F.; Korsholm, S. B.; Leipold, F.; Michelsen, P. K.; Nielsen, S. K.; Salewski, M.; Stejner, M.; Bindslev, H.; Furtula, V.; Kantor, M.

    2012-10-15

    Localized measurements of the fast ion velocity distribution function and the plasma composition measurements are of significant interest for the fusion community. Collective Thomson scattering (CTS) diagnostics allow such measurements with spatial and temporal resolution. Localized measurements require a good alignment of the optical path in the transmission line. Monitoring the alignment during the experiment greatly benefits the confidence in the CTS measurements. An in situ technique for the assessment of the elevation angle alignment of the receiver is developed. Using the CTS diagnostic on TEXTOR without a source of probing radiation in discharges with sawtooth oscillations, an elevation angle misalignment of 0.9 Degree-Sign was found with an accuracy of 0.25 Degree-Sign .

  14. Anchoring energy enhancement and pretilt angle control of liquid crystal alignment on polymerized surfaces

    NASA Astrophysics Data System (ADS)

    Weng, Libo; Liao, Pei-Chun; Lin, Chen-Chun; Ting, Tien-Lun; Hsu, Wen-Hao; Su, Jenn-Jia; Chien, Liang-Chy

    2015-09-01

    We demonstrate enhanced surface anchoring energy and control of pretilt angle in a nematic liquid crystal cell with vertical alignment and polymerized surfaces (PS-VA). The polymerized surfaces are formed by ultraviolet (UV) irradiation-induced phase separation of a minute amount of a reactive monomer in the vertical-aligned nematic liquid crystal. By introducing a bias voltage during UV curing, surface-localized polymer protrusions with a dimension of 100nm and a field-induced pretilt angle are observed. Experimental evidences and theoretical analyses validate that PS-VA has increased surface anchoring strength by two folds and pretilt angle has been changed from 89° to 86° compared to those of a VA cell. The enabling PS-VA cell technique with excel electro-optical properties such as very good dark state, high optical contrast, and fast rise and decay times may lead to development of a wide range of applications.

  15. Anchoring energy enhancement and pretilt angle control of liquid crystal alignment on polymerized surfaces

    SciTech Connect

    Weng, Libo; Chien, Liang-Chy; Liao, Pei-Chun; Lin, Chen-Chun; Ting, Tien-Lun; Hsu, Wen-Hao; Su, Jenn-Jia

    2015-09-15

    We demonstrate enhanced surface anchoring energy and control of pretilt angle in a nematic liquid crystal cell with vertical alignment and polymerized surfaces (PS-VA). The polymerized surfaces are formed by ultraviolet (UV) irradiation-induced phase separation of a minute amount of a reactive monomer in the vertical-aligned nematic liquid crystal. By introducing a bias voltage during UV curing, surface-localized polymer protrusions with a dimension of 100nm and a field-induced pretilt angle are observed. Experimental evidences and theoretical analyses validate that PS-VA has increased surface anchoring strength by two folds and pretilt angle has been changed from 89° to 86° compared to those of a VA cell. The enabling PS-VA cell technique with excel electro-optical properties such as very good dark state, high optical contrast, and fast rise and decay times may lead to development of a wide range of applications.

  16. Broadband wide-angle dispersion measurements: Instrumental setup, alignment, and pitfalls

    SciTech Connect

    Farhang, A.; Abasahl, B.; Dutta-Gupta, S.; Lovera, A.; Martin, O. J. F.; Mandracci, P.; Descrovi, E.

    2013-03-15

    The construction, alignment, and performance of a setup for broadband wide-angle dispersion measurements, with emphasis on surface plasmon resonance (SPR) measurements, are presented in comprehensive detail. In contrast with most SPR instruments working with a monochromatic source, this setup takes advantage of a broadband/white light source and has full capability for automated angle vs. wavelength dispersion measurements for any arbitrary nanostructure array. A cylindrical prism is used rather than a triangular one in order to mitigate refraction induced effects and allow for such measurements. Although seemingly simple, this instrument requires use of many non-trivial methods in order to achieve proper alignment over all angles of incidence. Here we describe the alignment procedure for such a setup, the pitfalls introduced from the finite beam width incident onto the cylindrical prism, and deviations in the reflected/transmitted beam resulting from the finite thickness of the sample substrate. We address every one of these issues and provide experimental evidences on the success of this instrument and the alignment procedure used.

  17. Large-scale spatial angle measurement and the pointing error analysis

    NASA Astrophysics Data System (ADS)

    Xiao, Wen-jian; Chen, Zhi-bin; Ma, Dong-xi; Zhang, Yong; Liu, Xian-hong; Qin, Meng-ze

    2016-05-01

    A large-scale spatial angle measurement method is proposed based on inertial reference. Common measurement reference is established in inertial space, and the spatial vector coordinates of each measured axis in inertial space are measured by using autocollimation tracking and inertial measurement technology. According to the spatial coordinates of each test vector axis, the measurement of large-scale spatial angle is easily realized. The pointing error of tracking device based on the two mirrors in the measurement system is studied, and the influence of different installation errors to the pointing error is analyzed. This research can lay a foundation for error allocation, calibration and compensation for the measurement system.

  18. Measurement error analysis of the 3D four-wheel aligner

    NASA Astrophysics Data System (ADS)

    Zhao, Qiancheng; Yang, Tianlong; Huang, Dongzhao; Ding, Xun

    2013-10-01

    Positioning parameters of four-wheel have significant effects on maneuverabilities, securities and energy saving abilities of automobiles. Aiming at this issue, the error factors of 3D four-wheel aligner, which exist in extracting image feature points, calibrating internal and exeternal parameters of cameras, calculating positional parameters and measuring target pose, are analyzed respectively based on the elaborations of structure and measurement principle of 3D four-wheel aligner, as well as toe-in and camber of four-wheel, kingpin inclination and caster, and other major positional parameters. After that, some technical solutions are proposed for reducing the above error factors, and on this basis, a new type of aligner is developed and marketed, it's highly estimated among customers because the technical indicators meet requirements well.

  19. Comparison of Alignment Correction Angles Between Fixed-Bearing and Mobile-Bearing UKA.

    PubMed

    Inoue, Atsuo; Arai, Yuji; Nakagawa, Shuji; Inoue, Hiroaki; Yamazoe, Shoichi; Kubo, Toshikazu

    2016-01-01

    Good outcomes have been reported with both fixed-bearing and mobile-bearing unicompartmental knee arthroplasty (UKA). However, overcorrected alignment could induce the progression of arthritis on the non-arthroplasty side. Changes of limb alignment after UKA with both types of bearings (fixed bearing: 24 knees, mobile bearing: 28 knees) were investigated. The mean difference between the preoperative standing femoral-tibial angle (FTA) and postoperative standing FTA was significantly larger in mobile bearing UKA group. In fixed-bearing UKA, there must be some laxity in MCL tension so that a 2-mm tension gauge can be inserted. In mobile-bearing UKA, appropriate MCL tension is needed to prevent bearing dislocation. This difference in MCL tension may have caused the difference in the correction angle between the groups. PMID:26264178

  20. Oceanic low-angle monopulse radar tracking errors

    NASA Astrophysics Data System (ADS)

    Griesser, Timothy; Balanis, Constantine A.

    1987-01-01

    Radar systems often experience difficulties when tracking low-altitude targets over the ocean because of multipath effects. Whenever the radar cannot resolve the target from its image, it will track a false target position which can move far above or below the actual position. In this paper, mathematical models are utilized to quantitatively determine the degradation in tracking ability of a monopulse radar due to multipath. The model incorporates provisions for the antenna sum and difference patterns, including sidelobes, and for the antenna polarization. Divergence factors are utilized to account for the curvature of the earth's lossy surface. More accurate calculations of the phase length of the direct and reflected rays, using the spherical earth model, are included. Smooth- and rough-surface models are used to model the prevailing sea state. The smooth-surface model determines both stable and unstable equilibrium directions toward which the target position is indicated. The rough-surface model defines a band of maximum error in the indicated position, as a function of the surface waveheight, and it includes both the rough-specular and the rough-diffuse reflection term.

  1. Effects on rotation-angle conversion error from the pitch error in the rotor of a magnetoelectric converter

    SciTech Connect

    Ivanov, B.N.; Dubenets, A.L.

    1995-08-01

    The paper discusses the pitch error of the tooth rotor in a magnetoelectric angle convert or the error of measurement when the stator has one, two, or four readout one-tooth heads. The main reasons for error in converting the angle are deviations in the shape and size of the tooth elements in the rotor and stator, errors in their mutual disposition during displacement, and lack of coincidence between the geometrical axis of the input shaft and the axis of the rotor. The effects of the last factor have been considered, where suitable recommendations were made. In error tests were reported on tooth converters in which the rotor and stator had a large number of teeth arranged around the entire circle, while the parameters of the teeth and the gaps between them did not exceed the limits of deviation recommended. These converter provide high conversion accuracy, since they employ circular averaging of the error due to the deviations in the positions of the rotor teeth relative to the stator from the calculated values. However, such devices are complicated to make and often are not justified by the metrological and cost requirements. In most cases it is desirable to make the rotor as one of the tooth rings in a machine or instrument, while the stator consists of one, two, or several (usually four) readout one-tooth magnetoelectric heads.

  2. Optical pupil relay design for SILEX - Optimising wavefront error and transmit/receive beams co-alignment

    NASA Astrophysics Data System (ADS)

    Jonas, Reginald P.

    1992-06-01

    This paper describes some of the key parameters that have been considered for the European Satellite Interorbital Link EXperiment (SILEX) optical relay lens design. Particular attention has been given to the specific requirement of transmit/receive beams co-alignment. The method of evaluating co-alignment errors is described and the effect of manufacturing tolerances and environmental long term stability on the co-alignment error investigated.

  3. Empirical Evaluation of Visual Fatigue from Display Alignment Errors Using Cerebral Hemodynamic Responses

    PubMed Central

    Wiyor, Hanniebey D.; Ntuen, Celestine A.

    2013-01-01

    The purpose of this study was to investigate the effect of stereoscopic display alignment errors on visual fatigue and prefrontal cortical tissue hemodynamic responses. We collected hemodynamic data and perceptual ratings of visual fatigue while participants performed visual display tasks on 8 ft × 6 ft NEC LT silver screen with NEC LT 245 DLP projectors. There was statistical significant difference between subjective measures of visual fatigue before air traffic control task (BATC) and after air traffic control task (ATC 3), (P < 0.05). Statistical significance was observed between left dorsolateral prefrontal cortex oxygenated hemoglobin (l DLPFC-HbO2), left dorsolateral prefrontal cortex deoxygenated hemoglobin (l DLPFC-Hbb), and right dorsolateral prefrontal cortex deoxygenated hemoglobin (r DLPFC-Hbb) on stereoscopic alignment errors (P < 0.05). Thus, cortical tissue oxygenation requirement in the left hemisphere indicates that the effect of visual fatigue is more pronounced in the left dorsolateral prefrontal cortex. PMID:27006917

  4. Development of a three-dimensional angle errors detection and compensation system for two-dimensional stage

    NASA Astrophysics Data System (ADS)

    Huang, Qiang-Xian; Bian, Ya-Kui; Chen, Chen; Li, Rui-Jun

    2016-01-01

    In order to compensate three-dimensional (3D) angle errors of two-dimensional (2D) stage in motion, a 3D angle errors detection and compensation system using a modified DVD pick-up head has been developed in this paper. The modified DVD pick-up head, which consists of a commercial DVD pick-up head without objective lens and voice coil motor, is used as an angle sensor. The mechanism of the angle sensor is based on optical auto-collimation, and each sensor can detect two deflection angles of the stage simultaneously. Utilizing the angle error information obtained by two angle sensors which are set along X and Y moving direction respectively, the controlling system adjusts the nano-positioning stage by controlling the piezoelectric ceramic actuators' movement to compensate the angle errors of the stage. This system can achieve the measurement and compensation of yaw angle error, pitch angle error and roll angle error of the stage. Experimental results show that the angle detection range of this system is +/-110", the resolution is about 0.2", and the repeatability error is about 2″. After compensating, the 3D angle errors of 2D stage can be controlled within 3″. This system has the advantages of compact structure, low cost, etc.

  5. A Technique for determining the director pretilt angle in cells with hybrid or homeotropic alignment of a nematic liquid crystal

    NASA Astrophysics Data System (ADS)

    Vakulin, D. A.

    2015-12-01

    A new technique for determining the director pretilt angle in cells with hybrid or homeotropic alignment of a nematic liquid crystal has been developed. To use this technique, it is necessary to experimentally determine the transmission of an optical system in parallel polarizers and maximum transmission of a cell in crossed polarizers. The technique makes it possible to locally control the liquid crystal director alignment on an aligning surface.

  6. Dependences of ultrasonic properties on the propagation angle with respect to the trabecular alignment in trabecular bone

    NASA Astrophysics Data System (ADS)

    Lee, Kang Il

    2014-06-01

    The present study aims to investigate the dependences of ultrasonic properties on the propagation angle with respect to the trabecular alignment in 12 bovine femoral trabecular bone samples. The phase velocity and the attenuation coefficient of the fast wave measured at 0.5 MHz were found to decrease significantly with increasing angle and had their maximum values at 0°, i.e., for wave propagation in a direction parallel to the predominant trabecular alignment. The present study applied the angle-dependent Biot model by introducing anisotropy into the Biot model through the angle-dependent Young's, bulk, and shear moduli of the skeletal frame for trabecular bone to predict the measurements. Good agreement between the measurements and the prediction of the fast wave velocity suggests that the anisotropic fast wave velocity as a function of the propagation angle is mainly due to the variation in the elastic moduli of the skeletal frame with respect to the trabecular alignment.

  7. Flight Test Results of an Angle of Attack and Angle of Sideslip Calibration Method Using Output-Error Optimization

    NASA Technical Reports Server (NTRS)

    Siu, Marie-Michele; Martos, Borja; Foster, John V.

    2013-01-01

    As part of a joint partnership between the NASA Aviation Safety Program (AvSP) and the University of Tennessee Space Institute (UTSI), research on advanced air data calibration methods has been in progress. This research was initiated to expand a novel pitot-static calibration method that was developed to allow rapid in-flight calibration for the NASA Airborne Subscale Transport Aircraft Research (AirSTAR) facility. This approach uses Global Positioning System (GPS) technology coupled with modern system identification methods that rapidly computes optimal pressure error models over a range of airspeed with defined confidence bounds. Subscale flight tests demonstrated small 2-s error bounds with significant reduction in test time compared to other methods. Recent UTSI full scale flight tests have shown airspeed calibrations with the same accuracy or better as the Federal Aviation Administration (FAA) accepted GPS 'four-leg' method in a smaller test area and in less time. The current research was motivated by the desire to extend this method for inflight calibration of angle of attack (AOA) and angle of sideslip (AOS) flow vanes. An instrumented Piper Saratoga research aircraft from the UTSI was used to collect the flight test data and evaluate flight test maneuvers. Results showed that the output-error approach produces good results for flow vane calibration. In addition, maneuvers for pitot-static and flow vane calibration can be integrated to enable simultaneous and efficient testing of each system.

  8. Spin-orbit angle distribution and the origin of (mis)aligned hot Jupiters

    NASA Astrophysics Data System (ADS)

    Crida, A.; Batygin, K.

    2014-07-01

    Context. For 61 transiting hot Jupiters, the projection of the angle between the orbital plane and the stellar equator (called the spin-orbit angle) has been measured. For about half of them, a significant misalignment is detected, and retrograde planets have been observed. This challenges scenarios of the formation of hot Jupiters. Aims: In order to better constrain formation models, we relate the distribution of the real spin-orbit angle Ψ to the projected one β. Then, a comparison with the observations is relevant. Methods: We analyse the geometry of the problem to link analytically the projected angle β to the real spin-orbit angle Ψ. The distribution of Ψ expected in various models is taken from the literature, or derived with a simplified model and Monte Carlo simulations in the case of the disk-torquing mechanism. Results: An easy formula to compute the probability density function (PDF) of β knowing the PDF of Ψ is provided. All models tested here look compatible with the observed distribution beyond 40 degrees, which is so far poorly constrained by only 18 observations. But only the disk-torquing mechanism can account for the excess of aligned hot Jupiters, provided that the torquing is not always efficient. This is the case if the exciting binaries have semi-major axes as large as ~104 AU. Conclusions: Based on comparison with the set of observations available today, scattering models and the Kozai cycle with tidal friction models can not be solely responsible for the production of all hot Jupiters. Conversely, the presently observed distribution of the spin-orbit angles is compatible with most hot Jupiters having been transported by smooth migration inside a proto-planetary disk, itself possibly torqued by a companion.

  9. Multi-object Feature Detection and Error Correction for NIF Automatic Optical Alignment

    SciTech Connect

    Awwal, A S

    2006-07-17

    Fiducials imprinted on laser beams are used to perform video image based alignment of the beams in the National Ignition Facility (NIF) of Lawrence Livermore National Laboratory. In any laser beam alignment operation, a beam needs to be aligned to a reference location. Generally, the beam and reference fiducials are composed of separate beams, as a result only a single feature of each beam needs to be identified for determining the position of the beam or reference. However, it is possible to have the same beam image contain both the beam and reference fiducials. In such instances, it is essential to separately identify these features. In the absence of wavefront correction or when image quality is poor, the features of such beams may get distorted making it difficult to distinguish between different fiducials. Error checking and correction mechanism must be implemented to avoid misidentification of one type of feature as the other. This work presents the algorithm for multi-object detection and error correction implemented for such a beam line image in the NIF facility. Additionally, we show how when the original algorithm fails a secondary algorithm takes over and provides required location outputs.

  10. A measurement methodology for dynamic angle of sight errors in hardware-in-the-loop simulation

    NASA Astrophysics Data System (ADS)

    Zhang, Wen-pan; Wu, Jun-hui; Gan, Lin; Zhao, Hong-peng; Liang, Wei-wei

    2015-10-01

    In order to precisely measure dynamic angle of sight for hardware-in-the-loop simulation, a dynamic measurement methodology was established and a set of measurement system was built. The errors and drifts, such as synchronization delay, CCD measurement error and drift, laser spot error on diffuse reflection plane and optics axis drift of laser, were measured and analyzed. First, by analyzing and measuring synchronization time between laser and time of controlling data, an error control method was devised and lowered synchronization delay to 21μs. Then, the relationship between CCD device and laser spot position was calibrated precisely and fitted by two-dimension surface fitting. CCD measurement error and drift were controlled below 0.26mrad. Next, angular resolution was calculated, and laser spot error on diffuse reflection plane was estimated to be 0.065mrad. Finally, optics axis drift of laser was analyzed and measured which did not exceed 0.06mrad. The measurement results indicate that the maximum of errors and drifts of the measurement methodology is less than 0.275mrad. The methodology can satisfy the measurement on dynamic angle of sight of higher precision and lager scale.

  11. Image defects from surface and alignment errors in grazing incidence telescopes

    NASA Technical Reports Server (NTRS)

    Saha, Timo T.

    1989-01-01

    The rigid body motions and low frequency surface errors of grazing incidence Wolter telescopes are studied. The analysis is based on surface error descriptors proposed by Paul Glenn. In his analysis, the alignment and surface errors are expressed in terms of Legendre-Fourier polynomials. Individual terms in the expression correspond to rigid body motions (decenter and tilt) and low spatial frequency surface errors of mirrors. With the help of the Legendre-Fourier polynomials and the geometry of grazing incidence telescopes, exact and approximated first order equations are derived in this paper for the components of the ray intercepts at the image plane. These equations are then used to calculate the sensitivities of Wolter type I and II telescopes for the rigid body motions and surface deformations. The rms spot diameters calculated from this theory and OSAC ray tracing code agree very well. This theory also provides a tool to predict how rigid body motions and surface errors of the mirrors compensate each other.

  12. Pretilt Angle of Liquid Crystals on Polyimide Films Photo-Aligned by Single Oblique Angle Irradiation with Un-polarized Light

    NASA Astrophysics Data System (ADS)

    Sakamoto, Kenji; Usami, Kiyoaki; Sasaki, Toru; Uehara, Yoichi; Ushioda, Sukekatsu

    2006-04-01

    We have investigated the pretilt angle of liquid crystal (LC) molecules induced by photo-aligned films of polyimide containing azobenzene in the backbone structure (Azo-PI). The photo-alignment treatment was single oblique-angle irradiation with un-polarized light (UP-L) at an incidence angle of 45°. It was performed on films of polyamic acid (Azo-PAA) using a light source of wavelength 340-500 nm. The photo-treated films of Azo-PAA were converted into Azo-PI by thermal imidization. The pretilt angle of LC molecules was determined by a crystal rotation method. The pretilt angle increased with the UP-L exposure, reaching ˜3° at 880 J/cm2. For UP-L exposures above 440 J/cm2 the LC alignment was uniform and defect-free, while marbled textures were observed below 220 J/cm2. This is due to the small in-plane anisotropy of the photo-aligned Azo-PI films.

  13. A new angle for probing field-aligned irregularities with the Murchison Widefield Array

    NASA Astrophysics Data System (ADS)

    Loi, Shyeh Tjing; Murphy, Tara; Cairns, Iver H.; Trott, Cathryn M.; Hurley-Walker, Natasha; Feng, Lu; Hancock, Paul J.; Kaplan, David L.

    2016-06-01

    Electron density irregularities in the ionosphere are known to be magnetically anisotropic, preferentially elongated along the lines of force. While many studies of their morphology have been undertaken by topside sounding and whistler measurements, it is only recently that detailed regional-scale reconstructions have become possible, enabled by the advent of widefield radio telescopes. Here we present a new approach for visualizing and studying field-aligned irregularities (FAIs), which involves transforming interferometric measurements of total electron content gradients onto a magnetic shell tangent plane. This removes the perspective distortion associated with the oblique viewing angle of the irregularities from the ground, facilitating the decomposition of dynamics along and across magnetic field lines. We apply this transformation to the data set of Loi et al. (2015a), obtained on 15 October 2013 by the Murchison Widefield Array (MWA) radio telescope and displaying prominent FAIs. We study these FAIs in the new reference frame, quantifying field-aligned and field-transverse behavior, examining time and altitude dependencies, and extending the analysis to FAIs on subarray scales. We show that the inclination of the plane can be derived solely from the data and verify that the best fit value is consistent with the known magnetic inclination. The ability of the model to concentrate the fluctuations along a single spatial direction may find practical application to future calibration strategies for widefield interferometry, by providing a compact representation of FAI-induced distortions.

  14. Error estimates of triangular finite elements under a weak angle condition

    NASA Astrophysics Data System (ADS)

    Mao, Shipeng; Shi, Zhongci

    2009-08-01

    In this note, by analyzing the interpolation operator of Girault and Raviart given in [V. Girault, P.A. Raviart, Finite element methods for Navier-Stokes equations, Theory and algorithms, in: Springer Series in Computational Mathematics, Springer-Verlag, Berlin,1986] over triangular meshes, we prove optimal interpolation error estimates for Lagrange triangular finite elements of arbitrary order under the maximal angle condition in a unified and simple way. The key estimate is only an application of the Bramble-Hilbert lemma.

  15. Estimation of bias errors in angle-of-arrival measurements using platform motion

    NASA Astrophysics Data System (ADS)

    Grindlay, A.

    1981-08-01

    An algorithm has been developed to estimate the bias errors in angle-of-arrival measurements made by electromagnetic detection devices on-board a pitching and rolling platform. The algorithm assumes that continuous exact measurements of the platform's roll and pitch conditions are available. When the roll and pitch conditions are used to transform deck-plane angular measurements of a nearly fixed target's position to a stabilized coordinate system, the resulting stabilized coordinates (azimuth and elevation) should not vary with changes in the roll and pitch conditions. If changes do occur they are a result of bias errors in the measurement system and the algorithm which has been developed uses these changes to estimate the sense and magnitude of angular bias errors.

  16. Shear Induced Alignment of Multi-Walled Carbon Nanotube Dispersions via Small Angle X-Ray Scattering

    NASA Astrophysics Data System (ADS)

    Pujari, Saswati; Burghardt, Wesley R.; Rahatekar, Sameer S.; Windle, Alan H.; Koziol, Krzysztof K.

    2008-07-01

    We report small-angle x-ray scattering studies of shear-induced alignment of multi-walled carbon nanotube (MWCNT) dispersions. Uncured epoxy was used as a viscous, Newtonian suspending medium, and samples were prepared from `aligned' MWCNTs using methods previously reported (Rahatekar et al. J Rheol 40:599, 2006); here we emphasize measurements on rather dilute dispersions. Flow-induced alignment was studied in both the flow-gradient (1-2) plane, and the flow-vorticity (1-3) plane using, respectively, annular cone and plate and rotating disk x-ray shear cells. Small-angle x-ray scattering patterns were rendered anisotropic under application of shear flow. Measurements in the 1-2 plane indicate that the average MWCNT orientation direction is intermediate between the flow and gradient directions. Transient measurements of structure evolution enabled by high flux synchrotron radiation allowed study of time-dependent behavior following flow reversal and flow cessation.

  17. Effects of construction and alignment errors on the orbit functions of the advanced photon source storage ring

    SciTech Connect

    Bizek, H.; Crosbie, E.; Lessner, E.; Teng, L.; Wirsbinski, J.

    1991-01-01

    The orbit functions for the Advanced Photon Source Storage Ring have been studied using the simulation code RACETRACK. Non-linear elements are substituted into the storage ring lattice to simulate the effects of construction and alignment errors in the quadrupole, dipole, and sextupole magnets. The effects of these errors on the orbit distortion, dispersion, and beta functions are then graphically analyzed to show the rms spread of the functions across several machines. The studies show that the most significant error is displacement of the quadrupole magnets. Further studies using a 3 bump correction routine show that these errors can be corrected to acceptable levels. 1 ref., 10 figs., 1 tab.

  18. Treatment of systematic errors in the processing of wide angle sonar sensor data for robotic navigation

    SciTech Connect

    Beckerman, M.; Oblow, E.M.

    1988-04-01

    A methodology has been developed for the treatment of systematic errors which arise in the processing of sparse sensor data. We present a detailed application of this methodology to the construction from wide-angle sonar sensor data of navigation maps for use in autonomous robotic navigation. In the methodology we introduce a four-valued labelling scheme and a simple logic for label combination. The four labels, conflict, occupied, empty and unknown, are used to mark the cells of the navigation maps; the logic allows for the rapid updating of these maps as new information is acquired. The systematic errors are treated by relabelling conflicting pixel assignments. Most of the new labels are obtained from analyses of the characteristic patterns of conflict which arise during the information processing. The remaining labels are determined by imposing an elementary consistent-labelling condition. 26 refs., 9 figs.

  19. Intermediate pre-tilt angle control by a composite alignment thin film structure for liquid crystal displays.

    PubMed

    Wu, G M; Chien, H W; Huang, J W; Zeng, H L

    2010-04-01

    We designed a patterned composite alignment thin film structure using a horizontal alignment polyimide (PI) layer and vertical alignment liquid crystal polymer (LCP) pillars. The LCP polymer precursor concentration was varied at 0-10% and the pillars were introduced by a photolithography process. Both single-sided and double-sided liquid crystal display cells were assembled for a series of electro-optical characterization techniques. The horizontal PI alignment layer alone had a designated control of the pre-tilt angle of 7 degrees after the prescribed mechanical rubbing process. The pre-tilt angle was improved to 24 degrees when the LCP precursor concentration was 5%. It was further increased to 61 degrees at the concentration of 10%. In addition, the study on the electrical response time and gray level variation demonstrated promising results for potential applications. The field-on response time was only 2.79 ms and the field-off response time was 0.35 ms for the double-sided liquid crystal display cells using a ramping voltage of 5.5 V. The effective control of the cell pre-tilt angle suggested that the display power consumption and response time would be greatly improved. PMID:20208122

  20. The Residual Setup Errors of Different IGRT Alignment Procedures for Head and Neck IMRT and the Resulting Dosimetric Impact

    SciTech Connect

    Graff, Pierre; Kirby, Neil; Weinberg, Vivian; Chen, Josephine; Yom, Sue S.; Lambert, Louise; Pouliot, Jean

    2013-05-01

    Purpose: To assess residual setup errors during head and neck radiation therapy and the resulting consequences for the delivered dose for various patient alignment procedures. Methods and Materials: Megavoltage cone beam computed tomography (MVCBCT) scans from 11 head and neck patients who underwent intensity modulated radiation therapy were used to assess setup errors. Each MVCBCT scan was registered to its reference planning kVCT, with seven different alignment procedures: automatic alignment and manual registration to 6 separate bony landmarks (sphenoid, left/right maxillary sinuses, mandible, cervical 1 [C1]-C2, and C7-thoracic 1 [T1] vertebrae). Shifts in the different alignments were compared with each other to determine whether there were any statistically significant differences. Then, the dose distribution was recalculated on 3 MVCBCT images per patient for every alignment procedure. The resulting dose-volume histograms for targets and organs at risk (OARs) were compared to those from the planning kVCTs. Results: The registration procedures produced statistically significant global differences in patient alignment and actual dose distribution, calling for a need for standardization of patient positioning. Vertically, the automatic, sphenoid, and maxillary sinuses alignments mainly generated posterior shifts and resulted in mean increases in maximal dose to OARs of >3% of the planned dose. The suggested choice of C1-C2 as a reference landmark appears valid, combining both OAR sparing and target coverage. Assuming this choice, relevant margins to apply around volumes of interest at the time of planning to take into account for the relative mobility of other regions are discussed. Conclusions: Use of different alignment procedures for treating head and neck patients produced variations in patient setup and dose distribution. With concern for standardizing practice, C1-C2 reference alignment with relevant margins around planning volumes seems to be a valid

  1. Application of advanced shearing techniques to the calibration of autocollimators with small angle generators and investigation of error sources.

    PubMed

    Yandayan, T; Geckeler, R D; Aksulu, M; Akgoz, S A; Ozgur, B

    2016-05-01

    The application of advanced error-separating shearing techniques to the precise calibration of autocollimators with Small Angle Generators (SAGs) was carried out for the first time. The experimental realization was achieved using the High Precision Small Angle Generator (HPSAG) of TUBITAK UME under classical dimensional metrology laboratory environmental conditions. The standard uncertainty value of 5 mas (24.2 nrad) reached by classical calibration method was improved to the level of 1.38 mas (6.7 nrad). Shearing techniques, which offer a unique opportunity to separate the errors of devices without recourse to any external standard, were first adapted by Physikalisch-Technische Bundesanstalt (PTB) to the calibration of autocollimators with angle encoders. It has been demonstrated experimentally in a clean room environment using the primary angle standard of PTB (WMT 220). The application of the technique to a different type of angle measurement system extends the range of the shearing technique further and reveals other advantages. For example, the angular scales of the SAGs are based on linear measurement systems (e.g., capacitive nanosensors for the HPSAG). Therefore, SAGs show different systematic errors when compared to angle encoders. In addition to the error-separation of HPSAG and the autocollimator, detailed investigations on error sources were carried out. Apart from determination of the systematic errors of the capacitive sensor used in the HPSAG, it was also demonstrated that the shearing method enables the unique opportunity to characterize other error sources such as errors due to temperature drift in long term measurements. This proves that the shearing technique is a very powerful method for investigating angle measuring systems, for their improvement, and for specifying precautions to be taken during the measurements. PMID:27250375

  2. Impact of pitch angle setup error and setup error correction on dose distribution in volumetric modulated arc therapy for prostate cancer.

    PubMed

    Takemura, Akihiro; Togawa, Kumiko; Yokoi, Tomohiro; Ueda, Shinichi; Noto, Kimiya; Kojima, Hironori; Isomura, Naoki; Kumano, Tomoyasu

    2016-07-01

    In volumetric modulated arc therapy (VMAT) for prostate cancer, a positional and rotational error correction is performed according to the position and angle of the prostate. The correction often involves body leaning, and there is concern regarding variation in the dose distribution. Our purpose in this study was to evaluate the impact of body pitch rotation on the dose distribution regarding VMAT. Treatment plans were obtained retrospectively from eight patients with prostate cancer. The body in the computed tomography images for the original VMAT plan was shifted to create VMAT plans with virtual pitch angle errors of ±1.5° and ±3°. Dose distributions for the tilted plans were recalculated with use of the same beam arrangement as that used for the original VMAT plan. The mean value of the maximum dose differences in the dose distributions between the original VMAT plan and the tilted plans was 2.98 ± 0.96 %. The value of the homogeneity index for the planning target volume (PTV) had an increasing trend according to the pitch angle error, and the values of the D 95 for the PTV and D 2ml, V 50, V 60, and V 70 for the rectum had decreasing trends (p < 0.05). However, there was no correlation between differences in these indexes and the maximum dose difference. The pitch angle error caused by body leaning had little effect on the dose distribution; in contrast, the pitch angle correction reduced the effects of organ displacement and improved these indexes. Thus, the pitch angle setup error in VMAT for prostate cancer should be corrected. PMID:26873139

  3. Estimates of the error caused by atmospheric turbulence in optical determination of the orientation angle of a series of reflectors

    NASA Astrophysics Data System (ADS)

    Valley, M. T.; Dudorov, V. V.; Kolosov, V. V.; Filimonov, G. A.

    2006-11-01

    The error caused by atmospheric turbulence, in determining the orientation angle of an object (a series of reflectors) has been studied. The orientation angle was determined by studying the image of the object. Numerical modeling was performed involving construction of the image of a series of reflectors as if they were observed through a turbulent medium, calculation of the coordinates of reflector mass centers, finding of the line closest to the reflector mass centers, and determination of its slope angle. Variance of the slope angle fluctuations is calculated.

  4. Locking Plate in Proximal Tibial Fracture: A Correlation between the Coronal Alignment of Tibia and Joint Screw Angle

    PubMed Central

    Oh, Jong-Keon; Varte, Lalrinliana; Ko, Jae-Han; Oh, Chang-Wug; Jung, Duk-Young; An, Hyonggin; Cho, Jae-Woo

    2013-01-01

    Purpose The purpose of this study is to evaluate the relationship between the angle formed between the proximal most screw through the locking compression plate-proximal lateral tibia (LCP PLT) and the joint line, and to evaluate if this angle can be used intraoperatively as an assessment tool to determine normal alignment of the tibia in the coronal plane. Materials and Methods There are two parts to this study: in the first part, LCP PLT was applied to 30 cadaveric adult tibia. The angle between the joint line and the proximal most screw was measured and termed as the 'joint screw angle' (JSA). In the second part, 56 proximal tibial fractures treated with LCP PLT were retrospectively studied. Two angles were measured on the radiographs, the medial proximal tibial angle (MPTA) and the JSA. Their relationship was analyzed statistically. Results The average JSA was 1.16 degrees in the anatomical study. Statistical analysis of the clinical study showed that the normal MPTA had a direct correlation with an acceptable JSA. Conclusion We therefore conclude that the JSA can be used intraoperatively to assess the achievement of a normal coronal axis. PMID:23549821

  5. Thermal electron acceleration by electric field spikes in the outer radiation belt: Generation of field-aligned pitch angle distributions

    NASA Astrophysics Data System (ADS)

    Vasko, I. Y.; Agapitov, O. V.; Mozer, F. S.; Artemyev, A. V.

    2015-10-01

    Van Allen Probes observations in the outer radiation belt have demonstrated an abundance of electrostatic electron-acoustic double layers (DL). DLs are frequently accompanied by field-aligned (bidirectional) pitch angle distributions (PAD) of electrons with energies from hundred eVs up to several keV. We perform numerical simulations of the DL interaction with thermal electrons making use of the test particle approach. DL parameters assumed in the simulations are adopted from observations. We show that DLs accelerate thermal electrons parallel to the magnetic field via the electrostatic Fermi mechanism, i.e., due to reflections from DL potential humps. The electron energy gain is larger for larger DL scalar potential amplitudes and higher propagation velocities. In addition to the Fermi mechanism, electrons can be trapped by DLs in their generation region and accelerated due to transport to higher latitudes. Both mechanisms result in formation of field-aligned PADs for electrons with energies comparable to those found in observations. The Fermi mechanism provides field-aligned PADs for <1 keV electrons, while the trapping mechanism extends field-aligned PADs to higher-energy electrons. It is shown that the Fermi mechanism can result in scattering into the loss cone of up to several tenths of percent of electrons with flux peaking at energies up to several hundred eVs.

  6. Mineral crystal alignment in mineralized fracture callus determined by 3D small-angle X-ray scattering

    NASA Astrophysics Data System (ADS)

    Liu, Yifei; Manjubala, Inderchand; Roschger, Paul; Schell, Hanna; Duda, Georg N.; Fratzl, Peter

    2010-10-01

    Callus tissue formed during bone fracture healing is a mixture of different tissue types as revealed by histological analysis. But the structural characteristics of mineral crystals within the healing callus are not well known. Since two-dimensional (2D) scanning small-angle X-ray scattering (sSAXS) patterns showed that the size and orientation of callus crystals vary both spatially and temporally [1] and 2D electron microscopic analysis implies an anisotropic property of the callus morphology, the mineral crystals within the callus are also expected to vary in size and orientation in 3D. Three-dimensional small-angle X-ray scattering (3D SAXS), which combines 2D SAXS patterns collected at different angles of sample tilting, has been previously applied to investigate bone minerals in horse radius [2] and oim/oim mouse femur/tibia [3]. We implement a similar 3D SAXS method but with a different way of data analysis to gather information on the mineral alignment in fracture callus. With the proposed accurate yet fast assessment of 3D SAXS information, it was shown that the plate shaped mineral particles in the healing callus were aligned in groups with their predominant orientations occurring as a fiber texture.

  7. A comparison of cylindrical and row trenched cooling holes with alignment angle of 0 degree near the combustor endwall

    NASA Astrophysics Data System (ADS)

    Kianpour, E.; Nor Azwadi, C. S.; Golshokouh, I.

    2013-12-01

    We studied the effects of cylindrical and row trenched cooling holes with alignment angle of 0° at BR=3.18 on the film cooling performance near the endwall surface of a combustor simulator. In this research, a three-dimensional presentation of gas turbine engine was simulated and analyzed with a commercial finite volume package FLUENT 6.2.26 to gain fundamental data. The current study has been performed with Reynolds-averaged Navier-Stokes turbulence model (RANS) on internal cooling passages. This combustor simulator combined the interaction of two rows of dilution jets, which were staggered in the stream wise direction and aligned in the span wise direction. The entire findings of the study declared that with using the row trenched holes near the enwall surface; film cooling effectiveness is doubled compared to the cooling performance of baseline case.

  8. Spin-Orbit angle distribution and the origin of (mis)aligned hot Jupiters

    NASA Astrophysics Data System (ADS)

    Crida, A.; Batygin, K.

    2014-12-01

    The angle between the orbital plane and the stellar equator (called the spin-orbit angle) has been measured for about 60 hot Jupiters, half of them showing significant misalignment. This challenges scenarios of the formation of hot Jupiters. Recently, it has been proposed that misalignment could be a consequence of the torquing of the proto-planetary disk by a transcient binary companion of the host star Here, we analyse the geometry of the problem, and compare the probability density function (PDF) of the projected spin-orbit angle expected in various mechanisms, with the observed one. Scattering models and the Kozai cycle with tidal friction models can not be solely responsible for the production of all hot Jupiters. Conversely, the presently observed distribution of the spin-orbit angles is compatible with most hot Jupiters having been transported by smooth migration inside a proto-planetary disk, itself possibly torqued by a companion.

  9. Method of alignment error control in free-form surface metrology with the tilted-wave-interferometer

    NASA Astrophysics Data System (ADS)

    Li, Jia; Shen, Hua; Zhu, Rihong

    2016-04-01

    Compared with conventional optical elements, free-form surface optical elements, as a kind of nonrotationally symmetrical shaped component, can provide more freedom in optical design, optimize the structure of the optical system, and improve its performance. However, the difficulties involved in the measurement of free-form elements restrict their manufacture and application. A tilted-wave-interferometer (TWI) can achieve high precision in free-form surface measurement, but it requires higher space attitude error control. We analyze the relation between the alignment error and the measurement error introduced by the misalignment in free-form surface metrology with TWI. The attitude control method in the rotation direction is proposed based on the moire fringe technique. Then, combining it with the five-dimensional space attitude control method of aspherical elements, we put forward an alignment error control process in measuring the free-form surface. An experiment of measuring a free-form surface using TWI shows the effectiveness of our method.

  10. SU-E-J-94: Positioning Errors Resulting From Using Bony Anatomy Alignment for Treating SBRT Lung Tumor

    SciTech Connect

    Frame, C; Ding, G

    2014-06-01

    Purpose: To quantify patient setups errors based on bony anatomy registration rather than 3D tumor alignment for SBRT lung treatments. Method: A retrospective study was performed for patients treated with lung SBRT and imaged with kV cone beam computed tomography (kV-CBCT) image-guidance. Daily CBCT images were registered to treatment planning CTs based on bony anatomy alignment and then inter-fraction tumor movement was evaluated by comparing shift in the tumor center in the medial-lateral, anterior-posterior, and superior-inferior directions. The PTV V100% was evaluated for each patient based on the average daily tumor displacement to assess the impact of the positioning error on the target coverage when the registrations were based on bony anatomy. Of the 35 patients studied, 15 were free-breathing treatments, 10 used abdominal compression with a stereotactic body frame, and the remaining 10 were performed with BodyFIX vacuum bags. Results: For free-breathing treatments, the range of tumor displacement error is between 1–6 mm in the medial-lateral, 1–13 mm in the anterior-posterior, and 1–7 mm in the superior-inferior directions. These positioning errors lead to 6–22% underdose coverage for PTV - V100% . Patients treated with abdominal compression immobilization showed positional errors of 0–4mm mediallaterally, 0–3mm anterior-posteriorly, and 0–2 mm inferior-superiorly with PTV - V100% underdose ranging between 6–17%. For patients immobilized with the vacuum bags, the positional errors were found to be 0–1 mm medial-laterally, 0–1mm anterior-posteriorly, and 0–2 mm inferior-superiorly with PTV - V100% under dose ranging between 5–6% only. Conclusion: It is necessary to align the tumor target by using 3D image guidance to ensure adequate tumor coverage before performing SBRT lung treatments. The BodyFIX vacuum bag immobilization method has the least positioning errors among the three methods studied when bony anatomy is used for

  11. Effect of measurement error on tests of density dependence of catchability for walleyes in northern Wisconsin angling and spearing fisheries

    USGS Publications Warehouse

    Hansen, M.J.; Beard, T.D., Jr.; Hewett, S.W.

    2005-01-01

    We sought to determine how much measurement errors affected tests of density dependence of spearing and angling catchability for walleye Sander vitreus by quantifying relationships between spearing and angling catch rates (catch/h) and walleye population density (number/acre) in northern Wisconsin lakes. The mean measurement error of spearing catch rates was 43.5 times greater than the mean measurement error of adult walleye population densities, whereas the mean measurement error of angling catch rates was only 5.6 times greater than the mean measurement error of adult walleye population densities. The bias-corrected estimate of the relationship between spearing catch rate and adult walleye population density was similar to the ordinary-least-squares regression estimate but differed significantly from the geometric mean (GM) functional regression estimate. In contrast, the bias-corrected estimate of the relationship between angling catch rate and total walleye population density was intermediate between ordinary-least-squares and GM functional regression estimates. Catch rates of walleyes in both spearing and angling fisheries were not linearly related to walleye population density, which indicated that catch rates in both fisheries were hyperstable in relation to walleye population density. For both fisheries, GM functional regression overestimated the degree of hyperdepletion in catch rates and ordinary-least-squares regression overestimated the degree of hyperstability in catch rates. However, ordinary-least-squares regression induced significantly less bias in tests of density dependence than GM functional regression, so it may be suitable for testing the degree of density dependence in fisheries for which fish population density is estimated with mark-recapture methods similar to those used in our study. ?? Copyright by the American Fisheries Society 2005.

  12. Measuring Scale Errors in a Laser Tracker's Horizontal Angle Encoder Through Simple Length Measurement and Two-Face System Tests.

    PubMed

    Muralikrishnan, B; Blackburn, C; Sawyer, D; Phillips, S; Bridges, R

    2010-01-01

    We describe a method to estimate the scale errors in the horizontal angle encoder of a laser tracker in this paper. The method does not require expensive instrumentation such as a rotary stage or even a calibrated artifact. An uncalibrated but stable length is realized between two targets mounted on stands that are at tracker height. The tracker measures the distance between these two targets from different azimuthal positions (say, in intervals of 20° over 360°). Each target is measured in both front face and back face. Low order harmonic scale errors can be estimated from this data and may then be used to correct the encoder's error map to improve the tracker's angle measurement accuracy. We have demonstrated this for the second order harmonic in this paper. It is important to compensate for even order harmonics as their influence cannot be removed by averaging front face and back face measurements whereas odd orders can be removed by averaging. We tested six trackers from three different manufacturers. Two of those trackers are newer models introduced at the time of writing of this paper. For older trackers from two manufacturers, the length errors in a 7.75 m horizontal length placed 7 m away from a tracker were of the order of ± 65 μm before correcting the error map. They reduced to less than ± 25 μm after correcting the error map for second order scale errors. Newer trackers from the same manufacturers did not show this error. An older tracker from a third manufacturer also did not show this error. PMID:27134789

  13. Multifield optimization intensity-modulated proton therapy (MFO-IMPT) for prostate cancer: Robustness analysis through simulation of rotational and translational alignment errors

    SciTech Connect

    Pugh, Thomas J.; Amos, Richard A.; John Baptiste, Sandra; Choi, Seungtaek; Nhu Nguyen, Quyhn; Ronald Zhu, X.; Palmer, Matthew B.; Lee, Andrew K.

    2013-10-01

    To evaluate the dosimetric consequences of rotational and translational alignment errors in patients receiving intensity-modulated proton therapy with multifield optimization (MFO-IMPT) for prostate cancer. Ten control patients with localized prostate cancer underwent treatment planning for MFO-IMPT. Rotational and translation errors were simulated along each of 3 axes: anterior-posterior (A-P), superior-inferior (S-I), and left-right. Clinical target-volume (CTV) coverage remained high with all alignment errors simulated. Rotational errors did not result in significant rectum or bladder dose perturbations. Translational errors resulted in larger dose perturbations to the bladder and rectum. Perturbations in rectum and bladder doses were minimal for rotational errors and larger for translational errors. Rectum V45 and V70 increased most with A-P misalignment, whereas bladder V45 and V70 changed most with S-I misalignment. The bladder and rectum V45 and V70 remained acceptable even with extreme alignment errors. Even with S-I and A-P translational errors of up to 5 mm, the dosimetric profile of MFO-IMPT remained favorable. MFO-IMPT for localized prostate cancer results in robust coverage of the CTV without clinically meaningful dose perturbations to normal tissue despite extreme rotational and translational alignment errors.

  14. Self-Noise of the STS-2 and sensitivity of its computation to errors in alignment of sensors

    NASA Astrophysics Data System (ADS)

    Gerner, Andreas; Sleeman, Reinoud; Grasemann, Bernhard; Lenhardt, Wolfgang

    2016-04-01

    The assessment of a seismometer's self-noise is an important part of establishing its health, quality, and suitability. A spectral coherence technique proposed by Sleeman et al. (2006) using synchronously recorded data of triples of collocated and co-aligned seismometers has shown to be a very robust and reliable way to estimate the self-noise of modern broadband seismic sensors. It has been demonstrated in previous works that the resulting self-noise spectra, primarily in the frequency range of Earth's microseisms, are considerably affected by small errors in the alignment of sensors. Further, due to the sensitivity of the 3-channel correlation technique to misalignment, numerical rotation of the recorded traces prior to self-noise computation can be performed to find best possible alignment by searching for minimum self-noise values. In this study we focus on the sensitivity of the 3-channel correlation technique to misalignment, and investigate the possibility of complete removal of the microseism signal from self-noise estimates for the sensors' three components separately. Data from a long-term installation of four STS-2 sensors, specifically intended for self-noise studies, at the Conrad Observatory (Austria) in a collaboration between the KNMI (Netherlands) and the ZAMG (Austria) provides a reliable basis for an accurate sensitivity analysis and self-noise assessment. Our work resulted in undisturbed self-noise estimates for the vertical components, and our current focus is on improving alignment of horizontal axes, and verification of the manufacturer's specification regarding orthogonality of all three components. The tools and methods developed within this research can help to quickly establish consistent self-noise models, including estimates of orthogonality and alignment, which facilitates comparison of different models and provides us with a means to test quality and accuracy of a seismic sensor over its life span.

  15. Three-dimensional analysis of alignment error in using femoral intramedullary guides in unicompartmental knee arthroplasty.

    PubMed

    Ma, Burton; Long, William; Rudan, John F; Ellis, Randy E

    2006-02-01

    We used computerized simulations with 3-dimensional models of 20 cadaver femora, calculated from computed tomographic scans, and a model of a rod measuring 200 x 5 mm to study femoral alignment accuracy for unicompartmental knee arthroplasty via minimally invasive reconstruction. The anatomical axis and insertion site were identified on each femur. A simulation of all feasible flexion-extension and varus-valgus orientations was performed. The average rod orientation was 3.2 degrees flexion and 2.5 degrees valgus. The range of orientation was 3.2 degrees extension to 9.7 degrees flexion and 4.5 degrees varus to 8.9 degrees valgus. The study suggests that a short narrow intramedullary rod inserted according to the manufacturer's specifications does not accurately find the anatomical axis and may lead to poor alignment of the femoral prosthesis. Given our finding of consistent bias toward excessive flexion and valgus alignment, we recommend that the operating surgeon carefully plan the insertion point of the intramedullary rod during surgery to compensate for this bias. PMID:16520218

  16. Determination of Steering Wheel Angles during CAR Alignment by Image Analysis Methods

    NASA Astrophysics Data System (ADS)

    Mueller, M.; Voegtle, T.

    2016-06-01

    Optical systems for automatic visual inspections are of increasing importance in the field of automation in the industrial domain. A new application is the determination of steering wheel angles during wheel track setting of the final inspection of car manufacturing. The camera has to be positioned outside the car to avoid interruptions of the processes and therefore, oblique images of the steering wheel must be acquired. Three different approaches of computer vision are considered in this paper, i.e. a 2D shape-based matching (by means of a plane to plane rectification of the oblique images and detection of a shape model with a particular rotation), a 3D shape-based matching approach (by means of a series of different perspectives of the spatial shape of the steering wheel derived from a CAD design model) and a point-to-point matching (by means of the extraction of significant elements (e.g. multifunctional buttons) of a steering wheel and a pairwise connection of these points to straight lines). The HALCON system (HALCON, 2016) was used for all software developments and necessary adaptions. As reference a mechanical balance with an accuracy of 0.1° was used. The quality assessment was based on two different approaches, a laboratory test and a test during production process. In the laboratory a standard deviation of ±0.035° (2D shape-based matching), ±0.12° (3D approach) and ±0.029° (point-to-point matching) could be obtained. The field test of 291 measurements (27 cars with varying poses and angles of the steering wheel) results in a detection rate of 100% and ±0.48° (2D matching) and ±0.24° (point-to-point matching). Both methods also fulfil the request of real time processing (three measurements per second).

  17. Experimental observation of water saturation effects on shear wave splitting in synthetic rock with fractures aligned at oblique angles

    NASA Astrophysics Data System (ADS)

    Amalokwu, Kelvin; Chapman, Mark; Best, Angus I.; Sothcott, Jeremy; Minshull, Timothy A.; Li, Xiang-Yang

    2015-01-01

    Fractured rocks are known to exhibit seismic anisotropy and shear wave splitting (SWS). SWS is commonly used for fractured rock characterization and has been shown to be sensitive to fluid type. The presence of partial liquid/gas saturation is also known to affect the elastic properties of rocks. The combined effect of both fractures and partial liquid/gas saturation is still unknown. Using synthetic, silica-cemented sandstones with aligned penny-shaped voids, we conducted laboratory ultrasonic experiments to investigate the effect fractures aligned at an oblique angle to wave propagation would have on SWS under partial liquid/gas saturation conditions. The result for the fractured rock shows a saturation dependence which can be explained by combining a fractured rock model and a partial saturation model. At high to full water saturation values, SWS decreases as a result of the fluid bulk modulus effect on the quasi-shear wave. This bulk modulus effect is frequency dependent as a result of wave-induced fluid flow mechanisms, which would in turn lead to frequency dependent SWS. This result suggests the possible use of SWS for discriminating between full liquid saturation and partial liquid/gas saturation.

  18. Microphase Separation and Shear Alignment of Gradient Copolymers: Melt Rheology and Small-Angle X-Ray Scattering Analysis

    SciTech Connect

    Mok, Michelle M.; Pujari, Saswati; Burghardt, Wesley R.; Dettmer, Christine M.; Nguyen, SonBinh T.; Ellison, Christopher J.; Torkelson, John M.

    2008-10-24

    The degree of microphase or nanophase segregation in gradient copolymers with compositions varying across the whole copolymer backbone is studied via low-amplitude oscillatory shear (LAOS) measurements and small-angle X-ray scattering (SAXS). Studies are done as a function of comonomer segregation strength, molecular weight (MW), gradient architecture and temperature. Controlled radical polymerization is used to synthesize strongly segregating styrene/4-acetoxystyrene (S/AS) and the more weakly segregating S/n-butyl acrylate (S/nBA) gradient copolymers. Results are compared to those from S/AS and S/nBA random and block copolymers. The higher MW S/AS gradient copolymer exhibits LAOS behavior similar to the highly microphase segregated S/AS block copolymer, while the lower MW S/AS gradient copolymer exhibits complex, nonterminal behavior indicative of a lower degree of microphase segregation. The S/nBA gradient copolymers demonstrate more liquidlike behavior, with the lower MW sample exhibiting near-Newtonian behavior, indicative of a weakly segregating structure, while the higher MW, steeper gradient sample shows behavior ranging from solidlike to more liquidlike with increasing temperature. With the exception of the lower MW S/nBA case, the gradient copolymers exhibit temperature-dependent LAOS behavior over a wide temperature range, reflecting their temperature-dependent nanodomain composition amplitudes. The S/AS samples have SAXS results consistent with the degree of microphase segregation observed via rheology. Shear alignment studies are done on the higher MW S/AS gradient copolymer, which is the most highly microphase segregated gradient copolymer. Rheology and SAXS provide evidence of shear alignment, despite the gradual variation in composition profile across the nanodomains of such gradient copolymers. A short review of the nomenclature and behavior of linear copolymer architectures is also provided.

  19. Detection and Alignment of 3D Domain Swapping Proteins Using Angle-Distance Image-Based Secondary Structural Matching Techniques

    PubMed Central

    Wang, Hsin-Wei; Hsu, Yen-Chu; Hwang, Jenn-Kang; Lyu, Ping-Chiang; Pai, Tun-Wen; Tang, Chuan Yi

    2010-01-01

    This work presents a novel detection method for three-dimensional domain swapping (DS), a mechanism for forming protein quaternary structures that can be visualized as if monomers had “opened” their “closed” structures and exchanged the opened portion to form intertwined oligomers. Since the first report of DS in the mid 1990s, an increasing number of identified cases has led to the postulation that DS might occur in a protein with an unconstrained terminus under appropriate conditions. DS may play important roles in the molecular evolution and functional regulation of proteins and the formation of depositions in Alzheimer's and prion diseases. Moreover, it is promising for designing auto-assembling biomaterials. Despite the increasing interest in DS, related bioinformatics methods are rarely available. Owing to a dramatic conformational difference between the monomeric/closed and oligomeric/open forms, conventional structural comparison methods are inadequate for detecting DS. Hence, there is also a lack of comprehensive datasets for studying DS. Based on angle-distance (A-D) image transformations of secondary structural elements (SSEs), specific patterns within A-D images can be recognized and classified for structural similarities. In this work, a matching algorithm to extract corresponding SSE pairs from A-D images and a novel DS score have been designed and demonstrated to be applicable to the detection of DS relationships. The Matthews correlation coefficient (MCC) and sensitivity of the proposed DS-detecting method were higher than 0.81 even when the sequence identities of the proteins examined were lower than 10%. On average, the alignment percentage and root-mean-square distance (RMSD) computed by the proposed method were 90% and 1.8Å for a set of 1,211 DS-related pairs of proteins. The performances of structural alignments remain high and stable for DS-related homologs with less than 10% sequence identities. In addition, the quality of its hinge

  20. Spot Scanning Proton Beam Therapy for Prostate Cancer: Treatment Planning Technique and Analysis of Consequences of Rotational and Translational Alignment Errors

    SciTech Connect

    Meyer, Jeff; Bluett, Jaques; Amos, Richard

    2010-10-01

    Purpose: Conventional proton therapy with passively scattered beams is used to treat a number of tumor sites, including prostate cancer. Spot scanning proton therapy is a treatment delivery means that improves conformal coverage of the clinical target volume (CTV). Placement of individual spots within a target is dependent on traversed tissue density. Errors in patient alignment perturb dose distributions. Moreover, there is a need for a rational planning approach that can mitigate the dosimetric effect of random alignment errors. We propose a treatment planning approach and then analyze the consequences of various simulated alignment errors on prostate treatments. Methods and Materials: Ten control patients with localized prostate cancer underwent treatment planning for spot scanning proton therapy. After delineation of the clinical target volume, a scanning target volume (STV) was created to guide dose coverage. Errors in patient alignment in two axes (rotational and yaw) as well as translational errors in the anteroposterior direction were then simulated, and dose to the CTV and normal tissues were reanalyzed. Results: Coverage of the CTV remained high even in the setting of extreme rotational and yaw misalignments. Changes in the rectum and bladder V45 and V70 were similarly minimal, except in the case of translational errors, where, as a result of opposed lateral beam arrangements, much larger dosimetric perturbations were observed. Conclusions: The concept of the STV as applied to spot scanning radiation therapy and as presented in this report leads to robust coverage of the CTV even in the setting of extreme patient misalignments.

  1. SU-C-18C-02: Specifcation of X-Ray Projection Angles Which Are Aligned with the Aortic Valve Plane From a Planar Image of a Valvuloplasty Balloon Inflated Across the Aortic Valve

    SciTech Connect

    Fetterly, K; Mathew, V

    2014-06-01

    Purpose: Transcatheter aortic valve replacement (TAVR) procedures provide a method to implant a prosthetic aortic valve via a minimallyinvasive, catheter-based procedure. TAVR procedures require use of interventional fluoroscopy c-arm projection angles which are aligned with the aortic valve plane to minimize prosthetic valve positioning error due to x-ray imaging parallax. The purpose of this work is to calculate the continuous range of interventional fluoroscopy c-arm projection angles which are aligned with the aortic valve plane from a single planar image of a valvuloplasty balloon inflated across the aortic valve. Methods: Computational methods to measure the 3D angular orientation of the aortic valve were developed. Required inputs include a planar x-ray image of a known valvuloplasty balloon inflated across the aortic valve and specifications of x-ray imaging geometry from the DICOM header of the image. A-priori knowledge of the species-specific typical range of aortic orientation is required to specify the sign of the angle of the long axis of the balloon with respect to the x-ray beam. The methods were validated ex-vivo and in a live pig. Results: Ex-vivo experiments demonstrated that the angular orientation of a stationary inflated valvuloplasty balloon can be measured with precision less than 1 degree. In-vivo pig experiments demonstrated that cardiac motion contributed to measurement variability, with precision less than 3 degrees. Error in specification of x-ray geometry directly influences measurement accuracy. Conclusion: This work demonstrates that the 3D angular orientation of the aortic valve can be calculated precisely from a planar image of a valvuloplasty balloon inflated across the aortic valve and known x-ray geometry. This method could be used to determine appropriate c-arm angular projections during TAVR procedures to minimize x-ray imaging parallax and thereby minimize prosthetic valve positioning errors.

  2. Caution: Precision Error in Blade Alignment Results in Faulty Unsteady CFD Simulation

    NASA Astrophysics Data System (ADS)

    Lewis, Bryan; Cimbala, John; Wouden, Alex

    2012-11-01

    Turbomachinery components experience unsteady loads at several frequencies. The rotor frequency corresponds to the time for one rotor blade to rotate between two stator vanes, and is normally dominant for rotor torque oscillations. The guide vane frequency corresponds to the time for two rotor blades to pass by one guide vane. The machine frequency corresponds to the machine RPM. Oscillations at the machine frequency are always present due to minor blade misalignments and imperfections resulting from manufacturing defects. However, machine frequency oscillations should not be present in CFD simulations if the mesh is free of both blade misalignment and surface imperfections. The flow through a Francis hydroturbine was modeled with unsteady Reynolds-Averaged Navier-Stokes (URANS) CFD simulations and a dynamic rotating grid. Spectral analysis of the unsteady torque on the rotor blades revealed a large component at the machine frequency. Close examination showed that one blade was displaced by 0 .0001° due to round-off errors during mesh generation. A second mesh without blade misalignment was then created. Subsequently, large machine frequency oscillations were not observed for this mesh. These results highlight the effect of minor geometry imperfections on CFD solutions. This research was supported by a grant from the DoE and a National Defense Science and Engineering Graduate Fellowship.

  3. Accurate Alignment of Plasma Channels Based on Laser Centroid Oscillations

    SciTech Connect

    Gonsalves, Anthony; Nakamura, Kei; Lin, Chen; Osterhoff, Jens; Shiraishi, Satomi; Schroeder, Carl; Geddes, Cameron; Toth, Csaba; Esarey, Eric; Leemans, Wim

    2011-03-23

    A technique has been developed to accurately align a laser beam through a plasma channel by minimizing the shift in laser centroid and angle at the channel outptut. If only the shift in centroid or angle is measured, then accurate alignment is provided by minimizing laser centroid motion at the channel exit as the channel properties are scanned. The improvement in alignment accuracy provided by this technique is important for minimizing electron beam pointing errors in laser plasma accelerators.

  4. The heart's fibre alignment assessed by comparing two digitizing systems. Methodological investigation into the inclination angle towards wall thickness.

    PubMed

    Lunkenheimer, P P; Redmann, K; Dietl, K H; Cryer, C; Richter, K D; Whimster, W F; Niederer, P

    1997-04-01

    Myocardial contractile pathways which are not aligned strictly parallel to the heart's epicardial surface, give rise to forces which also act in the ventricular dilating direction. We developed a method which allows us to assess any fibre orientation in the three-dimensional myocardial weave. Decollagenized hearts were prepared by peeling-off fibre strands, following their main fibre orientation down to near the endocardium. In the subepicardium the strands followed a course more or less parallel to the epicardium, whereas from the mid-wall on they tended to dive progressively deeper into the wall. The preparation displays more or less rugged surfaces rather than smooth layers. The grooves and crests on the exposed surfaces were sequentially digitized by two methods: (1) Using a magnet tablet (3 Draw Digitizer System, Polhemus, Cochester VTO 5446, USA) on a dilated pig heart we manually followed the crests using a stylus, handling each groove and crest as an individual contractile pathway. (2) A constricted cow heart was digitized using a contact-free optical system (opto TOP, Dr. Breuckmann, Meersburg, Germany), which is based on the principle of imaging triangulation. Using specially developed software the inclination angles of selected crests and grooves with respect to the epicardial surface were calculated. The two digitizing methods yield comparable results. We found a depth- and side-specific weave component inclined to the epi-endocardial direction. This oblique netting component was more pronounced in the inner 1/3 of the wall than in the subepicardium. The inclination angle probably increases with increasing wall thickness during the ejection period. Manual digitizing is an easy and fast method which delivers consistent results comparable with those obtained by the cumbersome high resolution optical method. The rationales for the assessment of transmural fibre inclination are (1) the putative existence of dilating forces inherent in the myocardial weave

  5. IUS prerelease alignment

    NASA Technical Reports Server (NTRS)

    Evans, F. A.

    1978-01-01

    Space shuttle orbiter/IUS alignment transfer was evaluated. Although the orbiter alignment accuracy was originally believed to be the major contributor to the overall alignment transfer error, it was shown that orbiter alignment accuracy is not a factor affecting IUS alignment accuracy, if certain procedures are followed. Results are reported of alignment transfer accuracy analysis.

  6. Results from 1984 airborne Doppler lidar wind measurement program. Flight 6: Analysis of line-of-sight elevation angle errors and apparent Doppler velocities

    NASA Technical Reports Server (NTRS)

    Rothermel, Jeffry

    1987-01-01

    During the summer of 1984 the Marshall Space Flight Center's Airborne Doppler Lidar System (ADLS) made a series of wind measurements in the California Central Valley. This study quantifies the lidar beam angle errors and velocity errors through analysis of ground return signals. Line-of-sight elevation (LOSE) angle errors are under 1 deg. Apparent Doppler ground velocities, as large as 2m/s, are considerably less than in a previous flight experiment in 1981. No evidence was found of a Schuler resonance phenomenon common to inertial navigation systems (INS), however the aperiodic nature of the apparent velocities implies an error in the INS-derived ground speeds. Certain features and subtleties in the ground returns are explained in terms of atmospheric structure and characteristics of the ADLS hardware and software. Finally, least squares and low-pass filtering techniques are suggested for eliminating errors during post-processing.

  7. Alignability of Optical Interconnects

    NASA Astrophysics Data System (ADS)

    Beech, Russell Scott

    With the continuing drive towards higher speed, density, and functionality in electronics, electrical interconnects become inadequate. Due to optics' high speed and bandwidth, freedom from capacitive loading effects, and freedom from crosstalk, optical interconnects can meet more stringent interconnect requirements. But, an optical interconnect requires additional components, such as an optical source and detector, lenses, holographic elements, etc. Fabrication and assembly of an optical interconnect requires precise alignment of these components. The successful development and deployment of optical interconnects depend on how easily the interconnect components can be aligned and/or how tolerant the interconnect is to misalignments. In this thesis, a method of quantitatively specifying the relative difficulty of properly aligning an optical interconnect is described. Ways of using this theory of alignment to obtain design and packaging guidelines for optical interconnects are examined. The measure of the ease with which an optical interconnect can be aligned, called the alignability, uses the efficiency of power transfer as a measure of alignment quality. The alignability is related to interconnect package design through the overall cost measure, which depends upon various physical parameters of the interconnect, such as the cost of the components and the time required for fabrication and alignment. Through a mutual dependence on detector size, the relationship between an interconnect's alignability and its bandwidth, signal-to-noise ratio, and bit-error -rate is examined. The results indicate that a range of device sizes exists for which given performance threshold values are satisfied. Next, the alignability of integrated planar-optic backplanes is analyzed in detail. The resulting data show that the alignability can be optimized by varying the substrate thickness or the angle of reflection. By including the effects of crosstalk, in a multi-channel backplane, the

  8. Pretilt Angles of Vertically Aligned Nematic Liquid Crystal (NLC) with the Application of Copolymers Possessing Chalconyl and Cholesteryl Moieties

    NASA Astrophysics Data System (ADS)

    Hwang, Jeoung-Yeon; Seo, Dae-Shik; Son, Jong Ho; Suh, Dong Hack

    2000-11-01

    We performed the synthesis of a new copoly (M4Ch-ChMA), copoly ((4-methacryloyloxy) chalcone-cholestery methacrylate), with chalconyl and cholesteryl moiety characteristics for photoalignment materials. Good thermal stabilities of the synthesized copolymers are confirmed by thermogravimetric analysis (TGA) measurement. The pretilt angles of the nematic liquid crystal (NLC) are reduced as UV exposure time is increased on the copolymer surfaces. A pretilt angle of 81° in NLC was observed with UV exposure of 3 min on the copolymer-3 surface. The NLCs pretilt angle is attributed to increased chalcone with increasing the UV exposure time.

  9. Choice of Reference Sequence and Assembler for Alignment of Listeria monocytogenes Short-Read Sequence Data Greatly Influences Rates of Error in SNP Analyses

    PubMed Central

    Pightling, Arthur W.; Petronella, Nicholas; Pagotto, Franco

    2014-01-01

    The wide availability of whole-genome sequencing (WGS) and an abundance of open-source software have made detection of single-nucleotide polymorphisms (SNPs) in bacterial genomes an increasingly accessible and effective tool for comparative analyses. Thus, ensuring that real nucleotide differences between genomes (i.e., true SNPs) are detected at high rates and that the influences of errors (such as false positive SNPs, ambiguously called sites, and gaps) are mitigated is of utmost importance. The choices researchers make regarding the generation and analysis of WGS data can greatly influence the accuracy of short-read sequence alignments and, therefore, the efficacy of such experiments. We studied the effects of some of these choices, including: i) depth of sequencing coverage, ii) choice of reference-guided short-read sequence assembler, iii) choice of reference genome, and iv) whether to perform read-quality filtering and trimming, on our ability to detect true SNPs and on the frequencies of errors. We performed benchmarking experiments, during which we assembled simulated and real Listeria monocytogenes strain 08-5578 short-read sequence datasets of varying quality with four commonly used assemblers (BWA, MOSAIK, Novoalign, and SMALT), using reference genomes of varying genetic distances, and with or without read pre-processing (i.e., quality filtering and trimming). We found that assemblies of at least 50-fold coverage provided the most accurate results. In addition, MOSAIK yielded the fewest errors when reads were aligned to a nearly identical reference genome, while using SMALT to align reads against a reference sequence that is ∼0.82% distant from 08-5578 at the nucleotide level resulted in the detection of the greatest numbers of true SNPs and the fewest errors. Finally, we show that whether read pre-processing improves SNP detection depends upon the choice of reference sequence and assembler. In total, this study demonstrates that researchers should

  10. Choice of reference sequence and assembler for alignment of Listeria monocytogenes short-read sequence data greatly influences rates of error in SNP analyses.

    PubMed

    Pightling, Arthur W; Petronella, Nicholas; Pagotto, Franco

    2014-01-01

    The wide availability of whole-genome sequencing (WGS) and an abundance of open-source software have made detection of single-nucleotide polymorphisms (SNPs) in bacterial genomes an increasingly accessible and effective tool for comparative analyses. Thus, ensuring that real nucleotide differences between genomes (i.e., true SNPs) are detected at high rates and that the influences of errors (such as false positive SNPs, ambiguously called sites, and gaps) are mitigated is of utmost importance. The choices researchers make regarding the generation and analysis of WGS data can greatly influence the accuracy of short-read sequence alignments and, therefore, the efficacy of such experiments. We studied the effects of some of these choices, including: i) depth of sequencing coverage, ii) choice of reference-guided short-read sequence assembler, iii) choice of reference genome, and iv) whether to perform read-quality filtering and trimming, on our ability to detect true SNPs and on the frequencies of errors. We performed benchmarking experiments, during which we assembled simulated and real Listeria monocytogenes strain 08-5578 short-read sequence datasets of varying quality with four commonly used assemblers (BWA, MOSAIK, Novoalign, and SMALT), using reference genomes of varying genetic distances, and with or without read pre-processing (i.e., quality filtering and trimming). We found that assemblies of at least 50-fold coverage provided the most accurate results. In addition, MOSAIK yielded the fewest errors when reads were aligned to a nearly identical reference genome, while using SMALT to align reads against a reference sequence that is ∼0.82% distant from 08-5578 at the nucleotide level resulted in the detection of the greatest numbers of true SNPs and the fewest errors. Finally, we show that whether read pre-processing improves SNP detection depends upon the choice of reference sequence and assembler. In total, this study demonstrates that researchers should

  11. Angle-resolved x-ray absorption near edge structure study of vertically aligned single-walled carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Li, Zhongrui; Zhang, Liang; Resasco, Daniel E.; Mun, Bongjin Simon; Requejo, Félix G.

    2007-03-01

    Vertically aligned single-walled carbon nanotube (SWNT) forest was studied by using angular-dependent C K-edge x-ray absorption near edge structure (XANES) with linearly polarized x-ray beam. The XANES analysis found a crust of entangled nanotubes on top of the forest formed at the first stage of the forest growth, which shapes the morphology of the entire forest and constricts the nanotubes to grow to the same length. It indicates that this type of SWNT forest has a different growth mechanism from the multiwalled carbon nanotube forest.

  12. Analysis of the patellofemoral congruence angle according to the rotational alignment of the femoral component in navigation-guided TKA.

    PubMed

    Moon, Young-Wan; Seo, Jai-Gon; Yang, Jae-Hyuk; Shon, Min-Soo

    2008-10-01

    The relative femoral resection plane from the posterior condylar axis was determined by the navigation system. The investigators found that there was a relatively variable range of femoral component rotation intraoperatively (0 degrees - 6 degrees) and attempted to determine whether this would affect postoperative patellofemoral congruence. Forty-six varus knees from 34 patients were included in the study; group 1 (15 knees) with 0 degrees or 1 degrees and group 2 (31 knees) with 3 degrees to 6 degrees . The mean (P = .855) and percentage of abnormal values (patellofemoral congruence angle <16 degrees) (P = .193) in preoperative radiographs showed no significant differences between the two groups. In postoperative findings, the mean of patellofemoral congruence angles in group 1 (20.5 degrees) showed a higher tendency than that in group 2 (14.1 degrees), but no statistically significant difference between two groups (P = .089). In conclusion, there was no statistically significant difference in patellofemoral congruence between 2 groups. PMID:19298032

  13. Does Assessing Eye Alignment along with Refractive Error or Visual Acuity Increase Sensitivity for Detection of Strabismus in Preschool Vision Screening?

    PubMed Central

    2007-01-01

    Purpose Preschool vision screenings often include refractive error or visual acuity (VA) testing to detect amblyopia, as well as alignment testing to detect strabismus. The purpose of this study was to determine the effect of combining screening for eye alignment with screening for refractive error or reduced VA on sensitivity for detection of strabismus, with specificity set at 90% and 94%. Methods Over 3 years, 4040 preschool children were screened in the Vision in Preschoolers (VIP) Study, with different screening tests administered each year. Examinations were performed to identify children with strabismus. The best screening tests for detecting children with any targeted condition were noncycloplegic retinoscopy (NCR), Retinomax autorefractor (Right Manufacturing, Virginia Beach, VA), SureSight Vision Screener (Welch-Allyn, Inc., Skaneateles, NY), and Lea Symbols (Precision Vision, LaSalle, IL and Good-Lite Co., Elgin, IL) and HOTV optotypes VA tests. Analyses were conducted with these tests of refractive error or VA paired with the best tests for detecting strabismus (unilateral cover testing, Random Dot “E” [RDE] and Stereo Smile Test II [Stereo Optical, Inc., Chicago, IL]; and MTI PhotoScreener [PhotoScreener, Inc., Palm Beach, FL]). The change in sensitivity that resulted from combining a test of eye alignment with a test of refractive error or VA was determined with specificity set at 90% and 94%. Results Among the 4040 children, 157 were identified as having strabismus. For screening tests conducted by eye care professionals, the addition of a unilateral cover test to a test of refraction generally resulted in a statistically significant increase (range, 15%–25%) in detection of strabismus. For screening tests administered by trained lay screeners, the addition of Stereo Smile II to SureSight resulted in a statistically significant increase (21%) in sensitivity for detection of strabismus. Conclusions The most efficient and low-cost ways to achieve

  14. The impact of different alignment strategies on the overall performance of a white light scanner according to sphere spacing error specified in VDI 2634

    NASA Astrophysics Data System (ADS)

    Klaas, Erik; Kropp, Johannes; Mongon, Bill

    2011-03-01

    System alignment strategies impact the overall performance of white light scanners, in particular affecting the uncertainty that is determined using the sphere spacing error specified in the VDI 2634 guideline. This paper addresses the accuracy of optical white light or so called "topometric" scanners. In almost any application of such scanners it is necessary to put together scans from different directions: from a couple of scans to a couple of hundred scans. Accuracy for the scanner itself can usually be well described for a single scan. However, the accuracy for assembled data sets from many scans is harder to estimate and specify as it depends on many more parameters as well as on the alignment strategy being used. This paper will describe different alignment strategies including the use of robots, tracking systems, and targets, as well as best fitting methods. The impact of these methods on the resulting overall accuracy is described and demonstrated using real test examples. In addition, different methods of achieving these accuracy numbers will be presented including using guidelines such as provided in VDI 2634. This paper will briefly touch on the basic principles of white light scanning to understand the potential as well as to illustrate the limitations of these techniques. This paper is intended to provide a useful guideline for engineers or quality managers who want to establish or learn more about new scanning technologies, with special attention given to the accuracy issues.

  15. Quantifying residual ionospheric errors in GNSS radio occultation bending angles based on ensembles of profiles from end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Liu, C. L.; Kirchengast, G.; Zhang, K.; Norman, R.; Li, Y.; Zhang, S. C.; Fritzer, J.; Schwaerz, M.; Wu, S. Q.; Tan, Z. X.

    2015-07-01

    The radio occultation (RO) technique using signals from the Global Navigation Satellite System (GNSS), in particular from the Global Positioning System (GPS) so far, is currently widely used to observe the atmosphere for applications such as numerical weather prediction and global climate monitoring. The ionosphere is a major error source in RO measurements at stratospheric altitudes, and a linear ionospheric correction of dual-frequency RO bending angles is commonly used to remove the first-order ionospheric effect. However, the residual ionospheric error (RIE) can still be significant so that it needs to be further mitigated for high-accuracy applications, especially above about 30 km altitude where the RIE is most relevant compared to the magnitude of the neutral atmospheric bending angle. Quantification and careful analyses for better understanding of the RIE is therefore important for enabling benchmark-quality stratospheric RO retrievals. Here we present such an analysis of bending angle RIEs covering the stratosphere and mesosphere, using quasi-realistic end-to-end simulations for a full-day ensemble of RO events. Based on the ensemble simulations we assessed the variation of bending angle RIEs, both biases and standard deviations, with solar activity, latitudinal region and with or without the assumption of ionospheric spherical symmetry and co-existing observing system errors. We find that the bending angle RIE biases in the upper stratosphere and mesosphere, and in all latitudinal zones from low to high latitudes, have a clear negative tendency and a magnitude increasing with solar activity, which is in line with recent empirical studies based on real RO data although we find smaller bias magnitudes, deserving further study in the future. The maximum RIE biases are found at low latitudes during daytime, where they amount to within -0.03 to -0.05 μrad, the smallest at high latitudes (0 to -0.01 μrad; quiet space weather and winter conditions

  16. Quantifying residual ionospheric errors in GNSS radio occultation bending angles based on ensembles of profiles from end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Liu, C. L.; Kirchengast, G.; Zhang, K.; Norman, R.; Li, Y.; Zhang, S. C.; Fritzer, J.; Schwaerz, M.; Wu, S. Q.; Tan, Z. X.

    2015-01-01

    The radio occultation (RO) technique using signals from the Global Navigation Satellite System (GNSS), in particular from the Global Positioning System (GPS) so far, is meanwhile widely used to observe the atmosphere for applications such as numerical weather prediction and global climate monitoring. The ionosphere is a major error source in RO measurements at stratospheric altitudes and a linear ionospheric correction of dual-frequency RO bending angles is commonly used to remove the first-order ionospheric effect. However, the residual ionopheric error (RIE) can still be significant so that it needs to be further mitigated for high accuracy applications, especially above about 30 km altitude where the RIE is most relevant compared to the magnitude of the neutral atmospheric bending angle. Quantification and careful analyses for better understanding of the RIE is therefore important towards enabling benchmark-quality stratospheric RO retrievals. Here we present such an analysis of bending angle RIEs covering the stratosphere and mesosphere, using quasi-realistic end-to-end simulations for a full-day ensemble of RO events. Based on the ensemble simulations we assessed the variation of bending angle RIEs, both biases and SDs, with solar activity, latitudinal region, and with or without the assumption of ionospheric spherical symmetry and of co-existing observing system errors. We find that the bending angle RIE biases in the upper stratosphere and mesosphere, and in all latitudinal zones from low- to high-latitudes, have a clear negative tendency and a magnitude increasing with solar activity, in line with recent empirical studies based on real RO data. The maximum RIE biases are found at low latitudes during daytime, where they amount to with in -0.03 to -0.05 μrad, the smallest at high latitudes (0 to -0.01 μrad; quiet space weather and winter conditions). Ionospheric spherical symmetry or asymmetries about the RO event location have only a minor influence on

  17. Inversion of vegetation canopy reflectance models for estimating agronomic variables. II - Use of angle transforms and error analysis as illustrated by Suits' model

    NASA Technical Reports Server (NTRS)

    Goel, N. S.; Thompson, R. L.; Strebel, D. E.

    1984-01-01

    The technique for inverting a vegetation canopy reflectance model described earlier (Goel and Strebel, 1983) is investigated further. The novel concept of an 'angle transform' is introduced. This concept allows the formation of functions of reflectances at different view zenith and azimuth angles, which are either sensitive or insensitive to a certain agronomic parameter. A proper combination of these functions can allow determination of all the important agronomic and spectral parameters from measured canopy reflectance data. The technique is demonstrated using Suits' (1972) model for homogeneous canopies. It is shown that leaf area index, leaf reflectance and transmittance, and average leaf angle all can be determined from the canopy reflectance at a set of selected view zenith and azimuth angles. A sensitivity analysis of the calculated values to the errors in the data is also carried out. Guidelines are formulated for the number and types of observations required to obtain the values of a particular canopy variable to within a given degree of accuracy for a given level of error in the measurement of canopy reflectance.

  18. The lethal response to Cdk1 inhibition depends on sister chromatid alignment errors generated by KIF4 and isoform 1 of PRC1.

    PubMed

    Voets, Erik; Marsman, Judith; Demmers, Jeroen; Beijersbergen, Roderick; Wolthuis, Rob

    2015-01-01

    Cyclin-dependent kinase 1 (Cdk1) is absolutely essential for cell division. Complete ablation of Cdk1 precludes the entry of G2 phase cells into mitosis, and is early embryonic lethal in mice. Dampening Cdk1 activation, by reducing gene expression or upon treatment with cell-permeable Cdk1 inhibitors, is also detrimental for proliferating cells, but has been associated with defects in mitotic progression, and the formation of aneuploid daughter cells. Here, we used a large-scale RNAi screen to identify the human genes that critically determine the cellular toxicity of Cdk1 inhibition. We show that Cdk1 inhibition leads to fatal sister chromatid alignment errors and mitotic arrest in the spindle checkpoint. These problems start early in mitosis and are alleviated by depletion of isoform 1 of PRC1 (PRC1-1), by gene ablation of its binding partner KIF4, or by abrogation of KIF4 motor activity. Our results show that, normally, Cdk1 activity must rise above the level required for mitotic entry. This prevents KIF4-dependent PRC1-1 translocation to astral microtubule tips and safeguards proper chromosome congression. We conclude that cell death in response to Cdk1 inhibitors directly relates to chromosome alignment defects generated by insufficient repression of PRC1-1 and KIF4 during prometaphase. PMID:26423135

  19. Improvement of bit error rate and page alignment in the holographic data storage system by using the structural similarity method.

    PubMed

    Chen, Yu-Ta; Ou-Yang, Mang; Lee, Cheng-Chung

    2012-06-01

    Although widely recognized as a promising candidate for the next generation of data storage devices, holographic data storage systems (HDSS) incur adverse effects such as noise, misalignment, and aberration. Therefore, based on the structural similarity (SSIM) concept, this work presents a more accurate locating approach than the gray level weighting method (GLWM). Three case studies demonstrate the effectiveness of the proposed approach. Case 1 focuses on achieving a high performance of a Fourier lens in HDSS, Cases 2 and 3 replace the Fourier lens with a normal lens to decrease the quality of the HDSS, and Case 3 demonstrates the feasibility of a defocus system in the worst-case scenario. Moreover, the bit error rate (BER) is evaluated in several average matrices extended from the located position. Experimental results demonstrate that the proposed SSIM method renders a more accurate centering and a lower BER, lower BER of 2 dB than those of the GLWM in Cases 1 and 2, and BER of 1.5 dB in Case 3. PMID:22695607

  20. A Nonlinear Observer for Gyro Alignment Estimation

    NASA Technical Reports Server (NTRS)

    Thienel, J.; Sanner, R. M.

    2003-01-01

    A nonlinear observer for gyro alignment estimation is presented. The observer is composed of two error terms, an attitude error and an alignment error. The observer is globally stable with exponential convergence of the attitude errors. The gyro alignment estimate converges to the true alignment when the system is completely observable.

  1. CuPc/Au(1 1 0): Determination of the azimuthal alignment by a combination of angle-resolved photoemission and density functional theory.

    PubMed

    Lüftner, Daniel; Milko, Matus; Huppmann, Sophia; Scholz, Markus; Ngyuen, Nam; Wießner, Michael; Schöll, Achim; Reinert, Friedrich; Puschnig, Peter

    2014-08-01

    Here we report on a combined experimental and theoretical study on the structural and electronic properties of a monolayer of Copper-Phthalocyanine (CuPc) on the Au(1 1 0) surface. Low-energy electron diffraction reveals a commensurate overlayer unit cell containing one adsorbate species. The azimuthal alignment of the CuPc molecule is revealed by comparing experimental constant binding energy (k x k y )-maps using angle-resolved photoelectron spectroscopy with theoretical momentum maps of the free molecule's highest occupied molecular orbital (HOMO). This structural information is confirmed by total energy calculations within the framework of van-der-Waals corrected density functional theory. The electronic structure is further analyzed by computing the molecule-projected density of states, using both a semi-local and a hybrid exchange-correlation functional. In agreement with experiment, the HOMO is located about 1.2 eV below the Fermi-level, while there is no significant charge transfer into the molecule and the CuPc LUMO remains unoccupied on the Au(1 1 0) surface. PMID:25284953

  2. CuPc/Au(1 1 0): Determination of the azimuthal alignment by a combination of angle-resolved photoemission and density functional theory

    PubMed Central

    Lüftner, Daniel; Milko, Matus; Huppmann, Sophia; Scholz, Markus; Ngyuen, Nam; Wießner, Michael; Schöll, Achim; Reinert, Friedrich; Puschnig, Peter

    2014-01-01

    Here we report on a combined experimental and theoretical study on the structural and electronic properties of a monolayer of Copper-Phthalocyanine (CuPc) on the Au(1 1 0) surface. Low-energy electron diffraction reveals a commensurate overlayer unit cell containing one adsorbate species. The azimuthal alignment of the CuPc molecule is revealed by comparing experimental constant binding energy (kxky)-maps using angle-resolved photoelectron spectroscopy with theoretical momentum maps of the free molecule's highest occupied molecular orbital (HOMO). This structural information is confirmed by total energy calculations within the framework of van-der-Waals corrected density functional theory. The electronic structure is further analyzed by computing the molecule-projected density of states, using both a semi-local and a hybrid exchange-correlation functional. In agreement with experiment, the HOMO is located about 1.2 eV below the Fermi-level, while there is no significant charge transfer into the molecule and the CuPc LUMO remains unoccupied on the Au(1 1 0) surface. PMID:25284953

  3. A Study of the Effect of Errors in Measurement of Velocity and Flight-Path Angle on the Guidance of a Space Vehicle Approaching the Earth

    NASA Technical Reports Server (NTRS)

    White, Jack A.

    1961-01-01

    An analysis was made of the guidance of a space vehicle approaching the earth at supercircular velocity through an entrance corridor containing a desired perigee altitude. Random errors were assumed in the measurement of velocity and flight-path angle and in obtaining the desired thrust impulse. The method described in NASA Technical Note D-191 of scheduling corrections at different values of the angle between perigee and the vehicle's position vector and a slight modification of this method were investigated as a means of correcting perigee altitude when the vehicle's predicted position was at programmed correction points not within a specified deadband about the desired perigee altitude. The study showed that modifying the angular method of NASA Technical Note D-191 by adding another correction near the initial point did not improve the efficiency and accuracy of the angular method. It was found that in some cases the use of a correction procedure which included a deadband could be more costly in total corrective velocity than a procedure which neglected the deadband. This was especially true if a large degree of confidence was required in the total corrective velocity. It was apparent from the results that a correction with a deadband limit in the guidance scheme was more sensitive to the initial conditions, the corrective procedure, the deadband, and the degree of confidence required than a correction without a deadband limit.

  4. Alignment as a Consequence of Expectation Adaptation: Syntactic Priming Is Affected by the Prime's Prediction Error Given both Prior and Recent Experience

    ERIC Educational Resources Information Center

    Jaeger, T. Florian; Snider, Neal E.

    2013-01-01

    Speakers show a remarkable tendency to align their productions with their interlocutors'. Focusing on sentence production, we investigate the cognitive systems underlying such alignment (syntactic priming). Our guiding hypothesis is that syntactic priming is a consequence of a language processing system that is organized to achieve efficient…

  5. Far-field detection system for laser beams alignment and crystals alignment

    NASA Astrophysics Data System (ADS)

    Liu, D.; Qin, H.; Zhu, B.

    2015-08-01

    Laser beams far-field alignment is very important for the high power laser facility as well as the frequency doubling crystals adjustment. Traditional beams alignment system and crystals alignment system are separated. That means, they use different optical image systems and CCD cameras, which will occupy larger space and use more money. A new farfield detection system of laser beams is presented with a big diffraction grating (37mm*37mm), a set of optical imaging components and a high resolution CCD camera. This detection system, which is fully demonstrated on the National Laser Facility of Israel, can align high power laser facility beams' direction as well as the frequency doubling crystals. The new system occupies small space in the spatial filter through off-axial grating sampling. The experimental results indicate that the average far-field alignment error is less than 5% of spatial filter pinhole diameter, and the average crystals' matching angle error is less than 10urad, which meet the alignment system requirements for beams and crystals.

  6. Estimation of daily interfractional larynx residual setup error after isocentric alignment for head and neck radiotherapy: Quality-assurance implications for target volume and organ-at-risk margination using daily CT-on-rails imaging

    PubMed Central

    Baron, Charles A.; Awan, Musaddiq J.; Mohamed, Abdallah S. R.; Akel, Imad; Rosenthal, David I.; Gunn, G. Brandon; Garden, Adam S.; Dyer, Brandon A.; Court, Laurence; Sevak, Parag R; Kocak-Uzel, Esengul; Fuller, Clifton D.

    2016-01-01

    Larynx may alternatively serve as a target or organ-at-risk (OAR) in head and neck cancer (HNC) image-guided radiotherapy (IGRT). The objective of this study was to estimate IGRT parameters required for larynx positional error independent of isocentric alignment and suggest population–based compensatory margins. Ten HNC patients receiving radiotherapy (RT) with daily CT-on-rails imaging were assessed. Seven landmark points were placed on each daily scan. Taking the most superior anterior point of the C5 vertebra as a reference isocenter for each scan, residual displacement vectors to the other 6 points were calculated post-isocentric alignment. Subsequently, using the first scan as a reference, the magnitude of vector differences for all 6 points for all scans over the course of treatment were calculated. Residual systematic and random error, and the necessary compensatory CTV-to-PTV and OAR-to-PRV margins were calculated, using both observational cohort data and a bootstrap-resampled population estimator. The grand mean displacements for all anatomical points was 5.07mm, with mean systematic error of 1.1mm and mean random setup error of 2.63mm, while bootstrapped POIs grand mean displacement was 5.09mm, with mean systematic error of 1.23mm and mean random setup error of 2.61mm. Required margin for CTV-PTV expansion was 4.6mm for all cohort points, while the bootstrap estimator of the equivalent margin was 4.9mm. The calculated OAR-to-PRV expansion for the observed residual set-up error was 2.7mm, and bootstrap estimated expansion of 2.9mm. We conclude that the interfractional larynx setup error is a significant source of RT set-up/delivery error in HNC both when the larynx is considered as a CTV or OAR. We estimate the need for a uniform expansion of 5mm to compensate for set up error if the larynx is a target or 3mm if the larynx is an OAR when using a non-laryngeal bony isocenter. PMID:25679151

  7. Improved calibration of IMU biases in analytic coarse alignment for AHRS

    NASA Astrophysics Data System (ADS)

    Lu, Jiazhen; Lei, Chaohua; Li, Baoguo; Wen, Ting

    2016-07-01

    An improved method for the inertial measurement unit (IMU) calibration of coarse alignment for the low-accuracy attitude heading reference system (AHRS) is proposed in this paper. The sensitivities of the Euler angles with respect to the inertial sensor biases are studied based on the analytic coarse alignment principle, and the errors of earth rotation rate and local gravity in the body frame caused by initial attitude error are analyzed. Then, an improved analytic coarse alignment algorithm with accelerometer and gyro bias calibration in an arbitrary three-position is proposed. Simulation and experiment results show that the novel method can calibrate accelerometer and gyro biases, reduce Euler angle attitude error, and improve navigation precision in practical applications. Moreover, this method can be applied to other low-accuracy inertial navigation systems.

  8. EINSTEIN Cluster Alignments Revisited

    NASA Astrophysics Data System (ADS)

    Chambers, S. W.; Melott, A. L.; Miller, C. J.

    2000-12-01

    We have examined whether the major axes of rich galaxy clusters tend to point (in projection) toward their nearest neighboring cluster. We used the data of Ulmer, McMillan and Kowalski, who used x-ray morphology to define position angles. Our cluster samples, with well measured redshifts and updated positions, were taken from the MX Northern Abell Cluster Survey. The usual Kolmogorov-Smirnov test shows no significant alignment signal for nonrandom angles for all separations less than 100 Mpc/h. Refining the null hypothesis, however, with the Wilcoxon rank-sum test, reveals a high confidence signal for alignment. This confidence is highest when we restrict our sample to small nearest neighbor separations. We conclude that we have identified a more powerful tool for testing cluster-cluster alignments. Moreover, there is a strong signal in the data for alignment, consistent with a picture of hierarchical cluster formation in which matter falls into clusters along large scale filamentary structures.

  9. CCD Camera Lens Interface for Real-Time Theodolite Alignment

    NASA Technical Reports Server (NTRS)

    Wake, Shane; Scott, V. Stanley, III

    2012-01-01

    Theodolites are a common instrument in the testing, alignment, and building of various systems ranging from a single optical component to an entire instrument. They provide a precise way to measure horizontal and vertical angles. They can be used to align multiple objects in a desired way at specific angles. They can also be used to reference a specific location or orientation of an object that has moved. Some systems may require a small margin of error in position of components. A theodolite can assist with accurately measuring and/or minimizing that error. The technology is an adapter for a CCD camera with lens to attach to a Leica Wild T3000 Theodolite eyepiece that enables viewing on a connected monitor, and thus can be utilized with multiple theodolites simultaneously. This technology removes a substantial part of human error by relying on the CCD camera and monitors. It also allows image recording of the alignment, and therefore provides a quantitative means to measure such error.

  10. Automated suppression of errors in LTP-II slope measurements of x-ray optics. Part 2: Specification for automated rotating/flipping/aligning system

    SciTech Connect

    Ali, Zulfiqar; Yashchuk, Valeriy V.

    2011-07-11

    Systematic error and instrumental drift are the major limiting factors of sub-microradian slope metrology with state-of-the-art x-ray optics. Significant suppression of the errors can be achieved by using an optimal measurement strategy suggested in [Rev. Sci. Instrum. 80, 115101 (2009)]. With this series of LSBL Notes, we report on development of an automated, kinematic, rotational system that provides fully controlled flipping, tilting, and shifting of a surface under test. The system is integrated into the Advanced Light Source long trace profiler, LTP-II, allowing for complete realization of the advantages of the optimal measurement strategy method. We provide details of the system?s design, operational control and data acquisition. The high performance of the system is demonstrated via the results of high precision measurements with a spherical test mirror.

  11. On the alignment space.

    PubMed

    Shen, Shi-Yi; Wang, Kui; Hu, Gang; Chen, Lu-Sheng; Zhang, Hua; Xia, Shu-Tao

    2005-01-01

    Sequences with generalized errors which are called mutations in bioinformatics and generalized error-correcting codes are studied in this paper. In the areas of bioinformatics, computer science and information theory, sequences with generalized errors are discussed respectively for different aims. Firstly, we give the definitions of alignment distance and Levenshtein distance by expansion sequences and discuss their properties and relations. Then the modular structure theory is introduced for strictly describe the expansion sequences. We show that the expansion modular structures of sequences form a Boolean algebra. As applications of the modular structure theory, we give a new and more strict proof of triangle inequality for alignment distance. At last, the definition and construction of generalized error-correcting codes are studied, and some optimal codes with small length are listed. PMID:17282158

  12. Far-field detection system for laser beam and crystal alignment

    NASA Astrophysics Data System (ADS)

    Zhang, Jiachen; Liu, Daizhong; Zhu, Baoqiang; Tang, Shunxing; Gao, Yanqi

    2016-03-01

    Laser beam far-field alignment as well as frequency-doubling and frequency-tripling crystal adjustment is very important for high-power laser facility. Separate systems for beam and crystal alignment are generally used while the proposed approach by off-axial grating sampling share common optics for these two functions, reducing both space and cost requirements. This detection system has been demonstrated on the National Laser Facility of Israel. The experimental results indicate that the average far-field alignment error is <5% of the spatial filter pinhole diameter, average autocollimation angle error of crystals is <10 μrad, and average frequency-tripling conversion efficiency is 69.3%, which meet the alignment system requirements on the beam direction and crystals.

  13. Estimation of stapes piston motion from uniaxial interferometer measurements along observation directions at an angle with the piston axis is prone to substantial errors

    NASA Astrophysics Data System (ADS)

    Decraemer, Willem F. S.; Khanna, Shyam M.; Dirckx, Joris J. J.

    2006-06-01

    We have shown that the vibration of the stapes in human, cat and gerbil exhibits all 3-D components of translation and rotation, but also that non-piston components do not contribute to the transmission path. In most experiments access for direct measurement of stapes motion in line with the piston axis is not available and piston motion is estimated from single component interferometric measurements done under observation directions that make angles up to 50° with the piston axis. We used a heterodyne microscope/interferometer to measure the vibration velocity of the stapes in human, cat and gerbil from different observation angles and calculated the complete set of 3-D motion components for the stapes. Using micro CT scans of the experimental ears, we could express the components in an intrinsic reference system and foretell the motion component that will be obtained when a single axis interferometric measurement is done under various angles with the piston axis. For low frequencies (f<2kHz) a cosine factor provides a good correction for the axis off-set, at higher frequencies the piston component can not correctly be estimated from a single off-axis observation. We will show that this may lead to serious misinterpretations of experimental results.

  14. Control for stabilizing the alignment position of the rotor of a synchronous motor

    DOEpatents

    Donley, Lawrence I.

    1988-01-01

    A method and apparatus for damping oscillations in the rotor load angle of a synchronous motor to provide stable rotational alignment in high precision applications. The damping method includes sensing the angular position of the rotor and utilizing the position signal to generate an error signal in response to changes in the period of rotation of the rotor. The error signal is coupled to phase shift amplifiers which shift the phase of the motor drive signal in a direction to damp out the oscillations in the rotor load angle.

  15. Control for stabilizing the alignment position of the rotor of the synchronous motor

    DOEpatents

    Donley, L.I.

    1985-03-12

    A method and apparatus is described for damping oscillations in the rotor load angle of a synchronous motor to provide stable rotational alignment in high precision applications. The damping method includes sensing the angular position of the rotor and utilizing the position signal to generate an error signal in response to changes in the period of rotation of the rotor. The error signal is coupled to phase shift amplifiers which shift the phase of the motor drive signal in a direction to damp out the oscillations in the rotor load angle.

  16. Adjustable cutting guide aligns and positions stacks of material

    NASA Technical Reports Server (NTRS)

    Thiel, A. M.

    1966-01-01

    Adjustable guide tool aligns and positions stacks of material for cutting at various angles. The device adapts its shape to stacks of any corner angle, adjusts to any cutting angle, and quickly aligns the stacks for repeated cutting. With this device, an operator need not place his hands under the knife during alignment.

  17. Swing arm profilometer: analytical solutions of misalignment errors for testing axisymmetric optics

    NASA Astrophysics Data System (ADS)

    Xiong, Ling; Luo, Xiao; Liu, Zhenyu; Wang, Xiaokun; Hu, Haixiang; Zhang, Feng; Zheng, Ligong; Zhang, Xuejun

    2016-07-01

    The swing arm profilometer (SAP) has been playing a very important role in testing large aspheric optics. As one of most significant error sources that affects the test accuracy, misalignment error leads to low-order errors such as aspherical aberrations and coma apart from power. In order to analyze the effect of misalignment errors, the relation between alignment parameters and test results of axisymmetric optics is presented. Analytical solutions of SAP system errors from tested mirror misalignment, arm length L deviation, tilt-angle θ deviation, air-table spin error, and air-table misalignment are derived, respectively; and misalignment tolerance is given to guide surface measurement. In addition, experiments on a 2-m diameter parabolic mirror are demonstrated to verify the model; according to the error budget, we achieve the SAP test for low-order errors except power with accuracy of 0.1 μm root-mean-square.

  18. Galaxy And Mass Assembly (GAMA): galaxy radial alignments in GAMA groups

    NASA Astrophysics Data System (ADS)

    Schneider, Michael D.; Cole, Shaun; Frenk, Carlos S.; Kelvin, Lee; Mandelbaum, Rachel; Norberg, Peder; Bland-Hawthorn, Joss; Brough, Sarah; Driver, Simon; Hopkins, Andrew; Liske, Jochen; Loveday, Jon; Robotham, Aaron

    2013-08-01

    We constrain the distributions of projected radial alignment angles of satellite galaxy shapes within the Galaxy And Mass Assembly survey group catalogue. We identify the galaxy groups using spectroscopic redshifts and measure galaxy projected ellipticities from Sloan Digital Sky Survey imaging. With a sample of 3850 groups with 13 655 satellite galaxies with high quality shape measurements, we find a less than 2σ signal of radial alignments in the mean projected ellipticity components and the projected position angle when using galaxy shape estimates optimized for weak lensing measurements. Our radial alignment measurement increases to greater than 3σ significance relative to the expectation for no alignments if we use 2D Sérsic model fits to define galaxy orientations. Our weak measurement of radial alignments is in conflict with predictions from dark-matter N-body simulations, which we interpret as evidence for large misalignments of baryons and dark matter in group and cluster satellites. Within our uncertainties, that are dominated by our small sample size, we find only weak and marginally significant trends of the radial alignment angle distributions on projected distance from the group centre, host halo mass, and redshift that could be consistent with a tidal torquing mechanism for radial alignments. Using our lensing optimized shape estimators, we estimate that intrinsic alignments of galaxy group members may contribute a systematic error to the mean differential projected surface mass density of groups inferred from weak lensing observations by -1 ± 20 per cent at scales around 300 h-1 kpc from the group centre assuming a photometric redshift rms error of 10 per cent, and given our group sample with median redshift of 0.17 and median virial masses ˜1013 h-1 M⊙.

  19. Improved docking alignment system

    NASA Technical Reports Server (NTRS)

    Monford, Leo G. (Inventor)

    1988-01-01

    Improved techniques are provided for the alignment of two objects. The present invention is particularly suited for 3-D translation and 3-D rotational alignment of objects in outer space. A camera is affixed to one object, such as a remote manipulator arm of the spacecraft, while the planar reflective surface is affixed to the other object, such as a grapple fixture. A monitor displays in real-time images from the camera such that the monitor displays both the reflected image of the camera and visible marking on the planar reflective surface when the objects are in proper alignment. The monitor may thus be viewed by the operator and the arm manipulated so that the reflective surface is perpendicular to the optical axis of the camera, the roll of the reflective surface is at a selected angle with respect to the camera, and the camera is spaced a pre-selected distance from the reflective surface.

  20. Alignment validation

    SciTech Connect

    ALICE; ATLAS; CMS; LHCb; Golling, Tobias

    2008-09-06

    The four experiments, ALICE, ATLAS, CMS and LHCb are currently under constructionat CERN. They will study the products of proton-proton collisions at the Large Hadron Collider. All experiments are equipped with sophisticated tracking systems, unprecedented in size and complexity. Full exploitation of both the inner detector andthe muon system requires an accurate alignment of all detector elements. Alignmentinformation is deduced from dedicated hardware alignment systems and the reconstruction of charged particles. However, the system is degenerate which means the data is insufficient to constrain all alignment degrees of freedom, so the techniques are prone to converging on wrong geometries. This deficiency necessitates validation and monitoring of the alignment. An exhaustive discussion of means to validate is subject to this document, including examples and plans from all four LHC experiments, as well as other high energy experiments.

  1. A line-source method for aligning on-board and other pinhole SPECT systems

    PubMed Central

    Yan, Susu; Bowsher, James; Yin, Fang-Fang

    2013-01-01

    Purpose: In order to achieve functional and molecular imaging as patients are in position for radiation therapy, a robotic multipinhole SPECT system is being developed. Alignment of the SPECT system—to the linear accelerator (LINAC) coordinate frame and to the coordinate frames of other on-board imaging systems such as cone-beam CT (CBCT)—is essential for target localization and image reconstruction. An alignment method that utilizes line sources and one pinhole projection is proposed and investigated to achieve this goal. Potentially, this method could also be applied to the calibration of the other pinhole SPECT systems. Methods: An alignment model consisting of multiple alignment parameters was developed which maps line sources in three-dimensional (3D) space to their two-dimensional (2D) projections on the SPECT detector. In a computer-simulation study, 3D coordinates of line-sources were defined in a reference room coordinate frame, such as the LINAC coordinate frame. Corresponding 2D line-source projections were generated by computer simulation that included SPECT blurring and noise effects. The Radon transform was utilized to detect angles (α) and offsets (ρ) of the line-source projections. Alignment parameters were then estimated by a nonlinear least squares method, based on the α and ρ values and the alignment model. Alignment performance was evaluated as a function of number of line sources, Radon transform accuracy, finite line-source width, intrinsic camera resolution, Poisson noise, and acquisition geometry. Experimental evaluations were performed using a physical line-source phantom and a pinhole-collimated gamma camera attached to a robot. Results: In computer-simulation studies, when there was no error in determining angles (α) and offsets (ρ) of the measured projections, six alignment parameters (three translational and three rotational) were estimated perfectly using three line sources. When angles (α) and offsets (ρ) were provided by

  2. A line-source method for aligning on-board and other pinhole SPECT systems

    SciTech Connect

    Yan, Susu; Bowsher, James; Yin, Fang-Fang

    2013-12-15

    Purpose: In order to achieve functional and molecular imaging as patients are in position for radiation therapy, a robotic multipinhole SPECT system is being developed. Alignment of the SPECT system—to the linear accelerator (LINAC) coordinate frame and to the coordinate frames of other on-board imaging systems such as cone-beam CT (CBCT)—is essential for target localization and image reconstruction. An alignment method that utilizes line sources and one pinhole projection is proposed and investigated to achieve this goal. Potentially, this method could also be applied to the calibration of the other pinhole SPECT systems.Methods: An alignment model consisting of multiple alignment parameters was developed which maps line sources in three-dimensional (3D) space to their two-dimensional (2D) projections on the SPECT detector. In a computer-simulation study, 3D coordinates of line-sources were defined in a reference room coordinate frame, such as the LINAC coordinate frame. Corresponding 2D line-source projections were generated by computer simulation that included SPECT blurring and noise effects. The Radon transform was utilized to detect angles (α) and offsets (ρ) of the line-source projections. Alignment parameters were then estimated by a nonlinear least squares method, based on the α and ρ values and the alignment model. Alignment performance was evaluated as a function of number of line sources, Radon transform accuracy, finite line-source width, intrinsic camera resolution, Poisson noise, and acquisition geometry. Experimental evaluations were performed using a physical line-source phantom and a pinhole-collimated gamma camera attached to a robot.Results: In computer-simulation studies, when there was no error in determining angles (α) and offsets (ρ) of the measured projections, six alignment parameters (three translational and three rotational) were estimated perfectly using three line sources. When angles (α) and offsets (ρ) were provided by

  3. Pupil Alignment Considerations for Large, Deployable Space Telescopes

    NASA Technical Reports Server (NTRS)

    Bos, Brent J.; Ohl, Raymond G.; Kubalak, Daivd A.

    2011-01-01

    For many optical systems the properties and alignment of the internal apertures and pupils are not critical or controlled with high precision during optical system design, fabrication or assembly. In wide angle imaging systems, for instance, the entrance pupil position and orientation is typically unconstrained and varies over the system s field of view in order to optimize image quality. Aperture tolerances usually do not receive the same amount of scrutiny as optical surface aberrations or throughput characteristics because performance degradation is typically graceful with misalignment, generally only causing a slight reduction in system sensitivity due to vignetting. But for a large deployable space-based observatory like the James Webb Space Telescope (JWST), we have found that pupil alignment is a key parameter. For in addition to vignetting, JWST pupil errors cause uncertainty in the wavefront sensing process that is used to construct the observatory on-orbit. Furthermore they also open stray light paths that degrade the science return from some of the telescope s instrument channels. In response to these consequences, we have developed several pupil measurement techniques for the cryogenic vacuum test where JWST science instrument pupil alignment is verified. These approaches use pupil alignment references within the JWST science instruments; pupil imaging lenses in three science instrument channels; and unique pupil characterization features in the optical test equipment. This will allow us to verify and crosscheck the lateral pupil alignment of the JWST science instruments to approximately 1-2% of their pupil diameters.

  4. Rotating Shaft Tilt Angle Measurement Using an Inclinometer

    NASA Astrophysics Data System (ADS)

    Luo, Jun; Wang, Zhiqian; Shen, Chengwu; Wen, Zhuoman; Liu, Shaojin; Cai, Sheng; Li, Jianrong

    2015-10-01

    This paper describes a novel measurement method to accurately measure the rotating shaft tilt angle of rotating machine for alignment or compensation using a dual-axis inclinometer. A model of the rotating shaft tilt angle measurement is established using a dual-axis inclinometer based on the designed mechanical structure, and the calculation equation between the rotating shaft tilt angle and the inclinometer axes outputs is derived under the condition that the inclinometer axes are perpendicular to the rotating shaft. The reversal measurement method is applied to decrease the effect of inclinometer drifts caused by temperature, to eliminate inclinometer and rotating shaft mechanical error and inclinometer systematic error to attain high measurement accuracy. The uncertainty estimation shows that the accuracy of rotating shaft tilt angle measurement depends mainly on the inclinometer uncertainty and its uncertainty is almost the same as the inclinometer uncertainty in the simulation. The experimental results indicate that measurement time is 4 seconds; the range of rotating shaft tilt angle is 0.002° and its standard deviation is 0.0006° using NS-5/P2 inclinometer, whose precision and resolution are ±0.01° and 0.0005°, respectively.

  5. Target alignment in the National Ignition Facility

    SciTech Connect

    Vann, C.S.; Bliss, E.S.; Murray, J.E.

    1994-06-06

    Accurate placement of hundreds of focused laser beams on target is necessary to achieve success in the National Ignition Facility (NIF). The current system requirement is {le}7 {mu}rad error in output pointing and {le}1 mm error in focusing. To accommodate several system shots per day, a target alignment system must be able to align the target to chamber center, inject an alignment beam to represent each shot beam, and point and focus the alignment beams onto the target in about one hour. At Lawrence Livermore National Laboratory, we have developed a target alignment concept and built a prototype to validate the approach. The concept comprises three systems: the chamber center reference, target alignment sensor, and target alignment beams.

  6. Prism Window for Optical Alignment

    NASA Technical Reports Server (NTRS)

    Tang, Hong

    2008-01-01

    A prism window has been devised for use, with an autocollimator, in aligning optical components that are (1) required to be oriented parallel to each other and/or at a specified angle of incidence with respect to a common optical path and (2) mounted at different positions along the common optical path. The prism window can also be used to align a single optical component at a specified angle of incidence. Prism windows could be generally useful for orienting optical components in manufacture of optical instruments. "Prism window" denotes an application-specific unit comprising two beam-splitter windows that are bonded together at an angle chosen to obtain the specified angle of incidence.

  7. The shapes and alignments of dark matter halos

    SciTech Connect

    Schneider, Michael D.; Frenk, Carlos S.; Cole, Shaun E-mail: c.s.frenk@durham.ac.uk

    2012-05-01

    We present measurements of the triaxial dark matter halo shapes and alignment correlation functions in the Millennium and Millennium-2 dark matter N-body simulations. These two simulations allow us to measure the distributions of halo shapes down to 10% of the virial radius over a halo mass range of 6 × 10{sup 9}–2 × 10{sup 14} h{sup −1}M{sub s}un. We largely confirm previous results on the distributions of halo axis ratios as a function of halo mass, but we find that the median angle between halo major axes at different halo radii can vary by a factor of 2 between the Millennium-1 and 2 simulations because of the different mass resolution. Thus, error in the shape determinations from limited resolution is potentially degenerate with the misalignment of halo inner and outer shapes used to constrain Brightest Cluster Galaxy alignments in previous works. We also present simplifying parameterizations for the 3-D halo-mass alignment correlation functions that are necessary ingredients for triaxial halo models of large-scale structure and models of galaxy intrinsic alignments as contaminants for cosmic shear surveys. We measure strong alignments between halos of all masses and the surrounding dark matter overdensities out to several tens of h{sup −1} Mpc, in agreement with observed shear-galaxy and cluster shape correlations. We use these measurements to forecast the contribution to the weak lensing signal around galaxy clusters from correlated mass along the line-of-sight. For prolate clusters with major axes aligned with the line-of-sight the fraction of the weak lensing signal from mass external to the cluster can be twice that predicted if the excess halo alignment correlation is assumed to be zero.

  8. Alignment fixture

    DOEpatents

    Bell, Grover C.; Gibson, O. Theodore

    1980-01-01

    A part alignment fixture is provided which may be used for precise variable lateral and tilt alignment relative to the fixture base of various shaped parts. The fixture may be used as a part holder for machining or inspection of parts or alignment of parts during assembly and the like. The fixture includes a precisely machined diameter disc-shaped hub adapted to receive the part to be aligned. The hub is nested in a guide plate which is adapted to carry two oppositely disposed pairs of positioning wedges so that the wedges may be reciprocatively positioned by means of respective micrometer screws. The sloping faces of the wedges contact the hub at respective quadrants of the hub periphery. The lateral position of the hub relative to the guide plate is adjusted by positioning the wedges with the associated micrometer screws. The tilt of the part is adjusted relative to a base plate, to which the guide plate is pivotally connected by means of a holding plate. Two pairs of oppositely disposed wedges are mounted for reciprocative lateral positioning by means of separate micrometer screws between flanges of the guide plate and the base plate. Once the wedges are positioned to achieve the proper tilt of the part or hub on which the part is mounted relative to the base plate, the fixture may be bolted to a machining, inspection, or assembly device.

  9. Accelerator and transport line survey and alignment

    SciTech Connect

    Ruland, R.E.

    1991-10-01

    This paper summarizes the survey and alignment processes of accelerators and transport lines and discusses the propagation of errors associated with these processes. The major geodetic principles governing the survey and alignment measurement space are introduced and their relationship to a lattice coordinate system shown. The paper continues with a broad overview about the activities involved in the step sequence from initial absolute alignment to final smoothing. Emphasis is given to the relative alignment of components, in particular to the importance of incorporating methods to remove residual systematic effects in surveying and alignment operations. Various approaches to smoothing used at major laboratories are discussed. 47 refs., 19 figs., 1 tab.

  10. Semiautomated improvement of RNA alignments

    PubMed Central

    Andersen, Ebbe S.; Lind-Thomsen, Allan; Knudsen, Bjarne; Kristensen, Susie E.; Havgaard, Jakob H.; Torarinsson, Elfar; Larsen, Niels; Zwieb, Christian; Sestoft, Peter; Kjems, Jørgen; Gorodkin, Jan

    2007-01-01

    We have developed a semiautomated RNA sequence editor (SARSE) that integrates tools for analyzing RNA alignments. The editor highlights different properties of the alignment by color, and its integrated analysis tools prevent the introduction of errors when doing alignment editing. SARSE readily connects to external tools to provide a flexible semiautomatic editing environment. A new method, Pcluster, is introduced for dividing the sequences of an RNA alignment into subgroups with secondary structure differences. Pcluster was used to evaluate 574 seed alignments obtained from the Rfam database and we identified 71 alignments with significant prediction of inconsistent base pairs and 102 alignments with significant prediction of novel base pairs. Four RNA families were used to illustrate how SARSE can be used to manually or automatically correct the inconsistent base pairs detected by Pcluster: the mir-399 RNA, vertebrate telomase RNA (vert-TR), bacterial transfer-messenger RNA (tmRNA), and the signal recognition particle (SRP) RNA. The general use of the method is illustrated by the ability to accommodate pseudoknots and handle even large and divergent RNA families. The open architecture of the SARSE editor makes it a flexible tool to improve all RNA alignments with relatively little human intervention. Online documentation and software are available at http://sarse.ku.dk. PMID:17804647

  11. ALIGNING JIG

    DOEpatents

    Culver, J.S.; Tunnell, W.C.

    1958-08-01

    A jig or device is described for setting or aligning an opening in one member relative to another member or structure, with a predetermined offset, or it may be used for measuring the amount of offset with which the parts have previously been sct. This jig comprises two blocks rabbeted to each other, with means for securing thc upper block to the lower block. The upper block has fingers for contacting one of the members to be a1igmed, the lower block is designed to ride in grooves within the reference member, and calibration marks are provided to determine the amount of offset. This jig is specially designed to align the collimating slits of a mass spectrometer.

  12. Particle Filter with Novel Nonlinear Error Model for Miniature Gyroscope-Based Measurement While Drilling Navigation

    PubMed Central

    Li, Tao; Yuan, Gannan; Li, Wang

    2016-01-01

    The derivation of a conventional error model for the miniature gyroscope-based measurement while drilling (MGWD) system is based on the assumption that the errors of attitude are small enough so that the direction cosine matrix (DCM) can be approximated or simplified by the errors of small-angle attitude. However, the simplification of the DCM would introduce errors to the navigation solutions of the MGWD system if the initial alignment cannot provide precise attitude, especially for the low-cost microelectromechanical system (MEMS) sensors operated in harsh multilateral horizontal downhole drilling environments. This paper proposes a novel nonlinear error model (NNEM) by the introduction of the error of DCM, and the NNEM can reduce the propagated errors under large-angle attitude error conditions. The zero velocity and zero position are the reference points and the innovations in the states estimation of particle filter (PF) and Kalman filter (KF). The experimental results illustrate that the performance of PF is better than KF and the PF with NNEM can effectively restrain the errors of system states, especially for the azimuth, velocity, and height in the quasi-stationary condition. PMID:26999130

  13. Particle Filter with Novel Nonlinear Error Model for Miniature Gyroscope-Based Measurement While Drilling Navigation.

    PubMed

    Li, Tao; Yuan, Gannan; Li, Wang

    2016-01-01

    The derivation of a conventional error model for the miniature gyroscope-based measurement while drilling (MGWD) system is based on the assumption that the errors of attitude are small enough so that the direction cosine matrix (DCM) can be approximated or simplified by the errors of small-angle attitude. However, the simplification of the DCM would introduce errors to the navigation solutions of the MGWD system if the initial alignment cannot provide precise attitude, especially for the low-cost microelectromechanical system (MEMS) sensors operated in harsh multilateral horizontal downhole drilling environments. This paper proposes a novel nonlinear error model (NNEM) by the introduction of the error of DCM, and the NNEM can reduce the propagated errors under large-angle attitude error conditions. The zero velocity and zero position are the reference points and the innovations in the states estimation of particle filter (PF) and Kalman filter (KF). The experimental results illustrate that the performance of PF is better than KF and the PF with NNEM can effectively restrain the errors of system states, especially for the azimuth, velocity, and height in the quasi-stationary condition. PMID:26999130

  14. What's Your Angle on Angles?

    ERIC Educational Resources Information Center

    Browning, Christine A.; Garza-Kling, Gina; Sundling, Elizabeth Hill

    2007-01-01

    Although the nature of the research varies, as do concepts of angle, research in general supports the supposition that angle is a complex idea, best understood from a variety of perspectives. In fact, the concept of angle tends to be threefold, consisting of: (1) the traditional, static notion of two rays meeting at a common vertex; (2) the idea…

  15. Image alignment

    DOEpatents

    Dowell, Larry Jonathan

    2014-04-22

    Disclosed is a method and device for aligning at least two digital images. An embodiment may use frequency-domain transforms of small tiles created from each image to identify substantially similar, "distinguishing" features within each of the images, and then align the images together based on the location of the distinguishing features. To accomplish this, an embodiment may create equal sized tile sub-images for each image. A "key" for each tile may be created by performing a frequency-domain transform calculation on each tile. A information-distance difference between each possible pair of tiles on each image may be calculated to identify distinguishing features. From analysis of the information-distance differences of the pairs of tiles, a subset of tiles with high discrimination metrics in relation to other tiles may be located for each image. The subset of distinguishing tiles for each image may then be compared to locate tiles with substantially similar keys and/or information-distance metrics to other tiles of other images. Once similar tiles are located for each image, the images may be aligned in relation to the identified similar tiles.

  16. Coordinate measurement machines as an alignment tool

    SciTech Connect

    Wand, B.T.

    1991-03-01

    In February of 1990 the Stanford Linear Accelerator Center (SLAC) purchased a LEITZ PM 12-10-6 CMM (Coordinate measurement machine). The machine is shared by the Quality Control Team and the Alignment Team. One of the alignment tasks in positioning beamline components in a particle accelerator is to define the component's magnetic centerline relative to external fiducials. This procedure, called fiducialization, is critical to the overall positioning tolerance of a magnet. It involves the definition of the magnetic center line with respect to the mechanical centerline and the transfer of the mechanical centerline to the external fiducials. To perform the latter a magnet coordinate system has to be established. This means defining an origin and the three rotation angles of the magnet. The datum definition can be done by either optical tooling techniques or with a CMM. As optical tooling measurements are very time consuming, not automated and are prone to errors, it is desirable to use the CMM fiducialization method instead. The establishment of a magnet coordinate system based on the mechanical center and the transfer to external fiducials will be discussed and presented with 2 examples from the Stanford Linear Collider (SLC). 7 figs.

  17. Nonvisual Cues for Aligning to Cross Streets

    ERIC Educational Resources Information Center

    Scott, Alan C.; Barlow, Janet M.; Guth, David A.; Bentzen, Billie Louise; Cunningham, Christopher M.; Long, Richard

    2011-01-01

    Accurately aligning to a crosswalk is an important component of safe street crossing for pedestrians who are blind. Six alignment cues were evaluated in a simulated crosswalk environment in which the angle of the crosswalk was not always in line with the slope of the ramp. The effectiveness of each cue is reported and implications are discussed.…

  18. Alignment of the VISA Undulator

    SciTech Connect

    Ruland, Robert

    1999-04-15

    The Visible-Infrared SASE Amplifier (VISA) undulator consists of four 99cm long segments. Each undulator segment is set up on a pulsed-wire bench, to characterize the magnetic properties and to locate the magnetic axis of the FODO array. Subsequently, the location of the magnetic axis, as defined by the wire, is referenced to tooling balls on each magnet segment by means of a straightness interferometer. After installation in the vacuum chamber, the four magnet segments are aligned with respect to themselves and globally to the beam line reference laser. A specially designed alignment fixture is used to mount one straightness interferometer each in the horizontal and vertical plane of the beam. The goal of these procedures is to keep the combined rms trajectory error, due to magnetic and alignment errors, to 50{micro}m.

  19. Primary mirror segment assembly integration and alignment for the James Webb Space Telescope

    NASA Astrophysics Data System (ADS)

    Wells, Conrad; Mallette, Mark; Fischer, David; Coon, Matthew; Amon, John; Kuipers, Les; Spina, John

    2010-08-01

    The Optical Telescope Element (OTE) consists of a 6.6 m, all-reflective, three-mirror anastigmat. The 18-segment primary mirror (PM) presents unique and challenging assembly, integration and alignment verification requirements. Each mirror segment is mechanically integrated with the Primary Mirror Backplane Support Structure (PMBSS) using compound angle shims to compensate for global alignment and local co-planarity errors. The processes used to determine the mechanical shim prescription, primary mirror alignment and integration, and placement verification are discussed. In an effort to reduce process uncertainty and program risk, the JWST program recently conducted a PMSA Integration Demonstration at ITT. Through this activity, full scale demonstrations of the Ground Support Equipment (GSE) and critical integration processes were successfully completed. The results of these demonstrations indicate that the equipment, processes, and procedures developed by ITT meet the critical requirements for PMSA placement.

  20. Effects of Magnet Errors in the ILC 14 mrad Extraction Line

    SciTech Connect

    Toprek, Dragan; Nosochkov, Yuri; /SLAC

    2009-05-08

    The ILC baseline extraction line is designed for 14 mrad horizontal crossing angle between e{sup +} and e{sup -} colliding beams at Interaction Point (IP). The extraction optics in the Interaction Region (IR) includes a detector integrated dipole field (anti-DID) to reduce orbit perturbation caused by the detector solenoid and minimize detector background. This paper presents a study of random field and alignment errors in the extraction magnets, compensation of the induced orbit perturbation, and effects of errors on extraction beam power loss. The results are obtained for the baseline ILC energy of 500 GeV center-of-mass and three options of beam parameters.

  1. Docking alignment system

    NASA Technical Reports Server (NTRS)

    Monford, Leo G. (Inventor)

    1990-01-01

    Improved techniques are provided for alignment of two objects. The present invention is particularly suited for three-dimensional translation and three-dimensional rotational alignment of objects in outer space. A camera 18 is fixedly mounted to one object, such as a remote manipulator arm 10 of the spacecraft, while the planar reflective surface 30 is fixed to the other object, such as a grapple fixture 20. A monitor 50 displays in real-time images from the camera, such that the monitor displays both the reflected image of the camera and visible markings on the planar reflective surface when the objects are in proper alignment. The monitor may thus be viewed by the operator and the arm 10 manipulated so that the reflective surface is perpendicular to the optical axis of the camera, the roll of the reflective surface is at a selected angle with respect to the camera, and the camera is spaced a pre-selected distance from the reflective surface.

  2. Testing the tidal alignment model of galaxy intrinsic alignment

    SciTech Connect

    Blazek, Jonathan; Seljak, Uroš; McQuinn, Matthew E-mail: mmcquinn@berkeley.edu

    2011-05-01

    Weak gravitational lensing has become a powerful probe of large-scale structure and cosmological parameters. Precision weak lensing measurements require an understanding of the intrinsic alignment of galaxy ellipticities, which can in turn inform models of galaxy formation. It is hypothesized that elliptical galaxies align with the background tidal field and that this alignment mechanism dominates the correlation between ellipticities on cosmological scales (in the absence of lensing). We use recent large-scale structure measurements from the Sloan Digital Sky Survey to test this picture with several statistics: (1) the correlation between ellipticity and galaxy overdensity, w{sub g+}; (2) the intrinsic alignment auto-correlation functions; (3) the correlation functions of curl-free, E, and divergence-free, B, modes, the latter of which is zero in the linear tidal alignment theory; (4) the alignment correlation function, w{sub g}(r{sub p},θ), a recently developed statistic that generalizes the galaxy correlation function to account for the angle between the galaxy separation vector and the principle axis of ellipticity. We show that recent measurements are largely consistent with the tidal alignment model and discuss dependence on galaxy luminosity. In addition, we show that at linear order the tidal alignment model predicts that the angular dependence of w{sub g}(r{sub p},θ) is simply w{sub g+}(r{sub p})cos (2θ) and that this dependence is consistent with recent measurements. We also study how stochastic nonlinear contributions to galaxy ellipticity impact these statistics. We find that a significant fraction of the observed LRG ellipticity can be explained by alignment with the tidal field on scales ∼> 10 \\hMpc. These considerations are relevant to galaxy formation and evolution.

  3. Antares beam-alignment-system performance

    SciTech Connect

    Appert, Q.D.; Bender, S.C.

    1983-01-01

    The beam alignment system for the 24-beam-sector Antares CO/sub 2/ fusion laser automatically aligns more than 200 optical elements. A visible-wavelength alignment technique is employed which uses a telescope/TV system to view point-light sources appropriately located down the beamline. The centroids of the light spots are determined by a video tracker, which generates error signals used by the computer control system to move appropriate mirrors in a closed-loop system. Final touch-up alignment is accomplished by projecting a CO/sub 2/ alignment laser beam through the system and sensing its position at the target location. The techniques and control algorithms employed have resulted in alignment accuracies exceeding design requirements. By employing video processing to determine the centroids of diffraction images and by averaging over multiple TV frames, we achieve alignment accuracies better than 0.1 times system diffraction limits in the presence of air turbulence.

  4. Alignment method for solar collector arrays

    DOEpatents

    Driver, Jr., Richard B

    2012-10-23

    The present invention is directed to an improved method for establishing camera fixture location for aligning mirrors on a solar collector array (SCA) comprising multiple mirror modules. The method aligns the mirrors on a module by comparing the location of the receiver image in photographs with the predicted theoretical receiver image location. To accurately align an entire SCA, a common reference is used for all of the individual module images within the SCA. The improved method can use relative pixel location information in digital photographs along with alignment fixture inclinometer data to calculate relative locations of the fixture between modules. The absolute locations are determined by minimizing alignment asymmetry for the SCA. The method inherently aligns all of the mirrors in an SCA to the receiver, even with receiver position and module-to-module alignment errors.

  5. High precision geometrical characterization and alignment of miniaturized optics

    NASA Astrophysics Data System (ADS)

    Langehanenberg, Patrik; Heinisch, Josef; Dumitrescu, Eugen

    2012-03-01

    Miniaturized optical systems like endoscopy or cell phone lenses systems comprise several optical elements like lenses, doublets and plane optics. To receive a good imaging quality the distances and angles between the different optical elements have to be as accurate as possible. In the first step we will describe how the distances and angles between different elements can be monitored and finally we will describe a technique to actively align small optics (diameter approx. 1mm and smaller) with respect to each other. For the measurement electronic autocollimators combined with white-light-interferometers are used. The electronic autocollimator reveals the exact centration errors between optical elements and the low coherence interferometer reveals the distances between surfaces. The accuracy of the centration error measurement is in the range of 0.1μm and the accuracy of the distance measurement is 1μm. Both methods can be applied to assembled multi-element optics. That means geometrical positions of all single surfaces of the final optical system can be analysed without loss of information. Both measurement techniques complement one another. Once the exact x,y,z - Position of each optical surface and element is known computer controlled actuators will be used to improve the alignment of the optics. For this purpose we use piezo-electric-actuators. This method had been applied to cement e.g. doublets for endoscope optics. In this case the optical axis of one lens has been aligned with respect to the optical axis of a second reference lens. Traditional techniques usually rely on an uncertain mechanical reference.

  6. Implementation of two-state alignment system into CXrL aligner (Poster Paper)

    NASA Astrophysics Data System (ADS)

    Chen, Guan-Jye; Bodoh, D.; Wallace, John P.; Anderson, Paul D.; Reilly, Michael T.; Nachman, Ramez; Cerrina, Franco

    1992-07-01

    We describe the implementation of the two-state alignment system into the CXrL aligner, which is developed at our Center for X-ray Lithography. The CXrL aligner is designed to expose sub 0.25 μm feature size integrated circuits. The aligner consists of a three-axes two-state alignment system for alignment error detection and a piezo based precision mechanical stage for alignment error correction. The wafer is held by a precision vacuum chuck, while the mask is held by three vacuum suction cups located around the glass ring. In the prototype, the mask to wafer relative positioning is achieved by 3 motorized stages (for gap setting) and 3 piezo-actuators (for lateral alignment). Since the optical system is designed to be located outside of the synchrotron radiation path, alignment can be performed during exposure. We present the results of the alignment system performance, such as noise equivalent displacement and alignment signal response time. An alignment signal repeatibility of much better than 3σ = 0.07μm is achieved. We also briefly describe the future evaluation of the system, such as overlay measurement of the system using verniers and SEM inspection of some specially designed patterns.

  7. Measurements of magnetic field alignment

    SciTech Connect

    Kuchnir, M.; Schmidt, E.E.

    1987-11-06

    The procedure for installing Superconducting Super Collider (SSC) dipoles in their respective cryostats involves aligning the average direction of their field with the vertical to an accuracy of 0.5 mrad. The equipment developed for carrying on these measurements is described and the measurements performed on the first few prototypes SSC magnets are presented. The field angle as a function of position in these 16.6 m long magnets is a characteristic of the individual magnet with possible feedback information to its manufacturing procedure. A comparison of this vertical alignment characteristic with a magnetic field intensity (by NMR) characteristic for one of the prototypes is also presented. 5 refs., 7 figs.

  8. Anisotropic light emission from aligned luminophores

    NASA Astrophysics Data System (ADS)

    Verbunt, Paul P. C.; de Jong, Ties M.; de Boer, Dick K. G.; Broer, Dirk J.; Debije, Michael G.

    2014-07-01

    The emission of aligned dichroic dyes in a luminescent solar concentrator (LSC) illuminated from one side with collimated light results in a non-isotropic light distribution. We develop a model to describe emission profiles for dichroic dyes aligned at a general tilt angle with respect to a lightguide surface (including planar and homeotropic alignments) for various order parameters. We compare calculations with experimental results, demonstrating the dichroic nature of the dyes can have significant impact on the surface loss of luminescent solar concentrators. Including this dichroic nature is essential in correctly simulating the preferred edge emissions demonstrated experimentally in dyes aligned planarly on the surface of a lightguide.

  9. Refractive Errors

    MedlinePlus

    ... and lens of your eye helps you focus. Refractive errors are vision problems that happen when the ... cornea, or aging of the lens. Four common refractive errors are Myopia, or nearsightedness - clear vision close ...

  10. Alignments between galaxies, satellite systems and haloes

    NASA Astrophysics Data System (ADS)

    Shao, Shi; Cautun, Marius; Frenk, Carlos S.; Gao, Liang; Crain, Robert A.; Schaller, Matthieu; Schaye, Joop; Theuns, Tom

    2016-08-01

    The spatial distribution of the satellite populations of the Milky Way and Andromeda are puzzling in that they are nearly perpendicular to the disks of their central galaxies. To understand the origin of such configurations we study the alignment of the central galaxy, satellite system and dark matter halo in the largest of the "Evolution and Assembly of GaLaxies and their Environments" (EAGLE) simulation. We find that centrals and their satellite systems tend to be well aligned with their haloes, with a median misalignment angle of $33^{\\circ}$ in both cases. While the centrals are better aligned with the inner $10$ kpc halo, the satellite systems are better aligned with the entire halo indicating that satellites preferentially trace the outer halo. The central - satellite alignment is weak (median misalignment angle of $52^{\\circ}$) and we find that around $20\\%$ of systems have a misalignment angle larger than $78^{\\circ}$, which is the value for the Milky Way. The central - satellite alignment is a consequence of the tendency of both components to align with the dark matter halo. As a consequence, when the central is parallel to the satellite system, it also tends to be parallel to the halo. In contrast, if the central is perpendicular to the satellite system, as in the case of the Milky Way and Andromeda, then the central - halo alignment is much weaker. Dispersion-dominated (spheroidal) centrals have a stronger alignment with both their halo and their satellites than rotation-dominated (disk) centrals. We also found that the halo, the central galaxy and the satellite system tend to be aligned with the surrounding large-scale distribution of matter, with the halo being the better aligned of the three.

  11. Alignments between galaxies, satellite systems and haloes

    NASA Astrophysics Data System (ADS)

    Shao, Shi; Cautun, Marius; Frenk, Carlos S.; Gao, Liang; Crain, Robert A.; Schaller, Matthieu; Schaye, Joop; Theuns, Tom

    2016-08-01

    The spatial distribution of the satellite populations of the Milky Way and Andromeda are puzzling in that they are nearly perpendicular to the discs of their central galaxies. To understand the origin of such configurations we study the alignment of the central galaxy, satellite system and dark matter halo in the largest of the `Evolution and Assembly of GaLaxies and their Environments' (EAGLE) simulation. We find that centrals and their satellite systems tend to be well aligned with their haloes, with a median misalignment angle of 33° in both cases. While the centrals are better aligned with the inner 10 kpc halo, the satellite systems are better aligned with the entire halo indicating that satellites preferentially trace the outer halo. The central-satellite alignment is weak (median misalignment angle of 52°) and we find that around 20 per cent of systems have a misalignment angle larger than 78°, which is the value for the Milky Way. The central-satellite alignment is a consequence of the tendency of both components to align with the dark matter halo. As a consequence, when the central is parallel to the satellite system, it also tends to be parallel to the halo. In contrast, if the central is perpendicular to the satellite system, as in the case of the Milky Way and Andromeda, then the central-halo alignment is much weaker. Dispersion-dominated (spheroidal) centrals have a stronger alignment with both their halo and their satellites than rotation-dominated (disc) centrals. We also found that the halo, the central galaxy and the satellite system tend to be aligned with the surrounding large-scale distribution of matter, with the halo being the better aligned of the three.

  12. Binocular collimation vs conditional alignment

    NASA Astrophysics Data System (ADS)

    Cook, William J.

    2012-10-01

    As binocular enthusiasts share their passion, topics related to collimation abound. Typically, we find how observers, armed only with a jeweler's screwdriver, can "perfectly collimate" his or her binocular, make it "spot on," or other verbiage of similar connotation. Unfortunately, what most are addressing is a form of pseudo-collimation I have referred to since the mid-1970s as "Conditional Alignment." Ignoring the importance of the mechanical axis (hinge) in the alignment process, this "condition," while having the potential to make alignment serviceable, or even outstanding—within a small range of IPD (Interpupillary Distance) settings relative to the user's spatial accommodation (the ability to accept small errors in parallelism of the optical axes)—may take the instrument farther from the 3-axis collimation conscientious manufacturers seek to implement. Becoming more optically savvy—and especially with so many mechanically inferior binoculars entering the marketplace— the consumer contemplating self-repair and alignment has a need to understand the difference between clinical, 3-axis "collimation" (meaning both optical axes are parallel with the axis of the hinge) and "conditional alignment," as differentiated in this paper. Furthermore, I believe there has been a long-standing need for the term "Conditional Alignment," or some equivalent, to be accepted as part of the vernacular of those who use binoculars extensively, whether for professional or recreational activities. Achieving that acceptance is the aim of this paper.

  13. Angle performance on optima MDxt

    SciTech Connect

    David, Jonathan; Kamenitsa, Dennis

    2012-11-06

    Angle control on medium current implanters is important due to the high angle-sensitivity of typical medium current implants, such as halo implants. On the Optima MDxt, beam-to-wafer angles are controlled in both the horizontal and vertical directions. In the horizontal direction, the beam angle is measured through six narrow slits, and any angle adjustment is made by electrostatically steering the beam, while cross-wafer beam parallelism is adjusted by changing the focus of the electrostatic parallelizing lens (P-lens). In the vertical direction, the beam angle is measured through a high aspect ratio mask, and any angle adjustment is made by slightly tilting the wafer platen prior to implant. A variety of tests were run to measure the accuracy and repeatability of Optima MDxt's angle control. SIMS profiles of a high energy, channeling sensitive condition show both the cross-wafer angle uniformity, along with the small-angle resolution of the system. Angle repeatability was quantified by running a channeling sensitive implant as a regular monitor over a seven month period and measuring the sheet resistance-to-angle sensitivity. Even though crystal cut error was not controlled for in this case, when attributing all Rs variation to angle changes, the overall angle repeatability was measured as 0.16 Degree-Sign (1{sigma}). A separate angle repeatability test involved running a series of V-curves tests over a four month period using low crystal cut wafers selected from the same boule. The results of this test showed the angle repeatability to be <0.1 Degree-Sign (1{sigma}).

  14. Optical aberrations and alignment of the eye with age.

    PubMed

    Berrio, Esther; Tabernero, Juan; Artal, Pablo

    2010-01-01

    We explored the relative changes in ocular, corneal, and internal aberrations associated with normal aging with special emphasis in the role of ocular alignment and lens shape factor in the balance of aberrations. Ocular and corneal aberrations together with the angle kappa were measured for a 5-mm pupil diameter in 46 eyes with low refractive errors and ages ranging between 20 and 77 years. The root mean square (RMS) of the higher order ocular and corneal aberrations increased with age at a rate of 0.0032 μm/year and 0.0015 μm/year, respectively. While in young eyes the partial compensation of aberrations by the internal surfaces was clear, no significant difference was found between corneal and ocular RMS in the older group. The ocular spherical aberration (0.0011 μm/year) and horizontal coma (0.0017 μm/year) increased moderately with age. This is not due to changes in the optical alignment, since angle kappa did not vary significantly with age. Age-related variations in the radii of curvature of the crystalline lens modify slightly its shape factor, reducing the compensation of lateral coma. This suggests that geometrical changes in the crystalline lens with age contribute to modify its aberration structure, reducing the compensation mechanism and explaining most of the measured increment of ocular aberrations with age. PMID:21196516

  15. He I VECTOR MAGNETOMETRY OF FIELD-ALIGNED SUPERPENUMBRAL FIBRILS

    SciTech Connect

    Schad, T. A.; Penn, M. J.; Lin, H.

    2013-05-10

    Atomic-level polarization and Zeeman effect diagnostics in the neutral helium triplet at 10830 A in principle allow full vector magnetometry of fine-scaled chromospheric fibrils. We present high-resolution spectropolarimetric observations of superpenumbral fibrils in the He I triplet with sufficient polarimetric sensitivity to infer their full magnetic field geometry. He I observations from the Facility Infrared Spectropolarimeter are paired with high-resolution observations of the H{alpha} 6563 A and Ca II 8542 A spectral lines from the Interferometric Bidimensional Spectrometer from the Dunn Solar Telescope in New Mexico. Linear and circular polarization signatures in the He I triplet are measured and described, as well as analyzed with the advanced inversion capability of the ''Hanle and Zeeman Light'' modeling code. Our analysis provides direct evidence for the often assumed field alignment of fibril structures. The projected angle of the fibrils and the inferred magnetic field geometry align within an error of {+-}10 Degree-Sign . We describe changes in the inclination angle of these features that reflect their connectivity with the photospheric magnetic field. Evidence for an accelerated flow ({approx}40 m s{sup -2}) along an individual fibril anchored at its endpoints in the strong sunspot and weaker plage in part supports the magnetic siphon flow mechanism's role in the inverse Evershed effect. However, the connectivity of the outer endpoint of many of the fibrils cannot be established.

  16. Innovative optical alignment technique for CMP wafers

    NASA Astrophysics Data System (ADS)

    Sugaya, Ayako; Kanaya, Yuho; Nakajima, Shinichi; Nagayama, Tadashi; Shiraishi, Naomasa

    2002-07-01

    Detecting position of the wafers such as after CMP process is critical theme of current and forthcoming IC manufacturing. The alignment system must be with high accuracy for any process. To satisfy such requirements, we have studied and analyzed factors that have made alignment difficult. From the result of the studies, we have developed new optical alignment techniques which improve the accuracy of FIA (alignment sensor of Nikon's NSR series) and examined them. The approaches are optimizing the focus position, developing an advanced algorithm for position detection, and selecting a suitable mark design. For experiment, we have developed the special wafers that make it possible to evaluate the influence of CMP processes. The experimental results show that the overlay errors decrease dramatically with the new alignment techniques. FIA with these new techniques will be much accurate and suitable alignment sensor for CMP and other processes of future generation ULSI production.

  17. Automated interferometric alignment system for paraboloidal mirrors

    DOEpatents

    Maxey, L.C.

    1993-09-28

    A method is described for a systematic method of interpreting interference fringes obtained by using a corner cube retroreflector as an alignment aid when aligning a paraboloid to a spherical wavefront. This is applicable to any general case where such alignment is required, but is specifically applicable in the case of aligning an autocollimating test using a diverging beam wavefront. In addition, the method provides information which can be systematically interpreted such that independent information about pitch, yaw and focus errors can be obtained. Thus, the system lends itself readily to automation. Finally, although the method is developed specifically for paraboloids, it can be seen to be applicable to a variety of other aspheric optics when applied in combination with a wavefront corrector that produces a wavefront which, when reflected from the correctly aligned aspheric surface will produce a collimated wavefront like that obtained from the paraboloid when it is correctly aligned to a spherical wavefront. 14 figures.

  18. Knee alignment in professional tennis players.

    PubMed

    Maquirriain, Javier

    2002-01-01

    This study determined lower-limb alignment and knee geometry in professional tennis players and compared the data with those from nonathletic individuals. Twenty-four radiographs from 12 asymptomatic players (mean age: 23.4+/-3.8 years) were prospectively studied. The three angles most useful for describing limb alignment and knee geometry in the coronal plane were measured: hip-knee-ankle, condylar-hip, and plateau-ankle. The condylar-plateau angle, frontal foot rotation angle, and the relationship between the mechanical axis and tibial plateau also were calculated. Varus limb alignment was predominant and the mechanical axis passed medially through the knee center; there was increased valgus inclination of the distal femur, varus angulation of the tibial plateau, near parallel alignment of the joint, and exaggerated external foot rotation. Hip-knee-ankle, condylar-hip, plateau-ankle, and frontal foot rotation angles were significantly different (P<.05, two-tailed t test) from previously reported angles of nonathletic individuals. Variations, probably due to repetitive dynamic demands imposed on lower limbs from an early age, seem to involve both femoral condyles and proximal tibial metaphyses, maintaining normal parallel joint alignment. PMID:11829331

  19. An Improved Inertial Frame Alignment Algorithm Based on Horizontal Alignment Information for Marine SINS.

    PubMed

    Che, Yanting; Wang, Qiuying; Gao, Wei; Yu, Fei

    2015-01-01

    In this paper, an improved inertial frame alignment algorithm for a marine SINS under mooring conditions is proposed, which significantly improves accuracy. Since the horizontal alignment is easy to complete, and a characteristic of gravity is that its component in the horizontal plane is zero, we use a clever method to improve the conventional inertial alignment algorithm. Firstly, a large misalignment angle model and a dimensionality reduction Gauss-Hermite filter are employed to establish the fine horizontal reference frame. Based on this, the projection of the gravity in the body inertial coordinate frame can be calculated easily. Then, the initial alignment algorithm is accomplished through an inertial frame alignment algorithm. The simulation and experiment results show that the improved initial alignment algorithm performs better than the conventional inertial alignment algorithm, and meets the accuracy requirements of a medium-accuracy marine SINS. PMID:26445048

  20. An Improved Inertial Frame Alignment Algorithm Based on Horizontal Alignment Information for Marine SINS

    PubMed Central

    Che, Yanting; Wang, Qiuying; Gao, Wei; Yu, Fei

    2015-01-01

    In this paper, an improved inertial frame alignment algorithm for a marine SINS under mooring conditions is proposed, which significantly improves accuracy. Since the horizontal alignment is easy to complete, and a characteristic of gravity is that its component in the horizontal plane is zero, we use a clever method to improve the conventional inertial alignment algorithm. Firstly, a large misalignment angle model and a dimensionality reduction Gauss-Hermite filter are employed to establish the fine horizontal reference frame. Based on this, the projection of the gravity in the body inertial coordinate frame can be calculated easily. Then, the initial alignment algorithm is accomplished through an inertial frame alignment algorithm. The simulation and experiment results show that the improved initial alignment algorithm performs better than the conventional inertial alignment algorithm, and meets the accuracy requirements of a medium-accuracy marine SINS. PMID:26445048

  1. PSAR: measuring multiple sequence alignment reliability by probabilistic sampling

    PubMed Central

    Kim, Jaebum; Ma, Jian

    2011-01-01

    Multiple sequence alignment, which is of fundamental importance for comparative genomics, is a difficult problem and error-prone. Therefore, it is essential to measure the reliability of the alignments and incorporate it into downstream analyses. We propose a new probabilistic sampling-based alignment reliability (PSAR) score. Instead of relying on heuristic assumptions, such as the correlation between alignment quality and guide tree uncertainty in progressive alignment methods, we directly generate suboptimal alignments from an input multiple sequence alignment by a probabilistic sampling method, and compute the agreement of the input alignment with the suboptimal alignments as the alignment reliability score. We construct the suboptimal alignments by an approximate method that is based on pairwise comparisons between each single sequence and the sub-alignment of the input alignment where the chosen sequence is left out. By using simulation-based benchmarks, we find that our approach is superior to existing ones, supporting that the suboptimal alignments are highly informative source for assessing alignment reliability. We apply the PSAR method to the alignments in the UCSC Genome Browser to measure the reliability of alignments in different types of regions, such as coding exons and conserved non-coding regions, and use it to guide cross-species conservation study. PMID:21576232

  2. DNA Align Editor: DNA Alignment Editor Tool

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The SNPAlignEditor is a DNA sequence alignment editor that runs on Windows platforms. The purpose of the program is to provide an intuitive, user-friendly tool for manual editing of multiple sequence alignments by providing functions for input, editing, and output of nucleotide sequence alignments....

  3. Wave-optical assessment of alignment tolerances in nano-focusing with ellipsoidal mirror

    NASA Astrophysics Data System (ADS)

    Yumoto, Hirokatsu; Koyama, Takahisa; Matsuyama, Satoshi; Yamauchi, Kazuto; Ohashi, Haruhiko

    2016-01-01

    High-precision ellipsoidal mirrors, which can efficiently focus X-rays to the nanometer dimension with a mirror, have not been realized because of the difficulties in the fabrication process. The purpose of our study was to develop nano-focusing ellipsoidal mirrors in the hard X-ray region. We developed a wave-optical focusing simulator for investigating alignment tolerances in nano-focusing with a designed ellipsoidal mirror, which produce a diffraction-limited focus size of 30 × 35 nm2 in full width at half maximum at an X-ray energy of 7 keV. The simulator can calculate focusing intensity distributions around the focal point under conditions of misalignment. The wave-optical simulator enabled the calculation of interference intensity distributions, which cannot be predicted by the conventional ray-trace method. The alignment conditions with a focal length error of ≲ ±10 µm, incident angle error of ≲ ±0.5 µrad, and in-plane rotation angle error of ≲ ±0.25 µrad must be satisfied for nano-focusing.

  4. Automatic Alignment of Displacement-Measuring Interferometer

    NASA Technical Reports Server (NTRS)

    Halverson, Peter; Regehr, Martin; Spero, Robert; Alvarez-Salazar, Oscar; Loya, Frank; Logan, Jennifer

    2006-01-01

    A control system strives to maintain the correct alignment of a laser beam in an interferometer dedicated to measuring the displacement or distance between two fiducial corner-cube reflectors. The correct alignment of the laser beam is parallel to the line between the corner points of the corner-cube reflectors: Any deviation from parallelism changes the length of the optical path between the reflectors, thereby introducing a displacement or distance measurement error. On the basis of the geometrical optics of corner-cube reflectors, the length of the optical path can be shown to be L = L(sub 0)cos theta, where L(sub 0) is the distance between the corner points and theta is the misalignment angle. Therefore, the measurement error is given by DeltaL = L(sub 0)(cos theta - 1). In the usual case in which the misalignment is small, this error can be approximated as DeltaL approximately equal to -L(sub 0)theta sup 2/2. The control system (see figure) is implemented partly in hardware and partly in software. The control system includes three piezoelectric actuators for rapid, fine adjustment of the direction of the laser beam. The voltages applied to the piezoelectric actuators include components designed to scan the beam in a circular pattern so that the beam traces out a narrow cone (60 microradians wide in the initial application) about the direction in which it is nominally aimed. This scan is performed at a frequency (2.5 Hz in the initial application) well below the resonance frequency of any vibration of the interferometer. The laser beam makes a round trip to both corner-cube reflectors and then interferes with the launched beam. The interference is detected on a photodiode. The length of the optical path is measured by a heterodyne technique: A 100- kHz frequency shift between the launched beam and a reference beam imposes, on the detected signal, an interferometric phase shift proportional to the length of the optical path. A phase meter comprising analog

  5. High angular accuracy manufacture method of micro v-grooves based on tool alignment by on-machine measurement.

    PubMed

    Zhang, Xiaodong; Jiang, Lili; Zeng, Zhen; Fang, Fengzhou; Liu, Xianlei

    2015-10-19

    Micro v-groove has found wide applications in optical areas as one of the most important structures. However, its performance is significantly affected by its angular geometry accuracy. The diamond cutting has been commonly used as the fabrication method of micro v-groove, but it is still difficult to guarantee the cutting tool angle, which is limited by the measurement accuracy in the manufacture and mounting of the diamond tool. A cutting tool alignment method based on the on-machine measurement is proposed to improve the fabricated quality of the v-groove angle. An on-machine probe is employed to scan the v-groove geometrical deviation precisely. The system errors model, data processing algorithm and tool alignment methods are analyzed in details. Experimental results show that the measurement standard deviation within 0.01° can be achieved. Retro-reflection mirrors are fabricated and measured finally by the proposed method for verification. PMID:26480443

  6. Angle detector

    NASA Technical Reports Server (NTRS)

    Parra, G. T. (Inventor)

    1978-01-01

    An angle detector for determining a transducer's angular disposition to a capacitive pickup element is described. The transducer comprises a pendulum mounted inductive element moving past the capacitive pickup element. The capacitive pickup element divides the inductive element into two parts L sub 1 and L sub 2 which form the arms of one side of an a-c bridge. Two networks R sub 1 and R sub 2 having a plurality of binary weighted resistors and an equal number of digitally controlled switches for removing resistors from the networks form the arms of the other side of the a-c bridge. A binary counter, controlled by a phase detector, balances the bridge by adjusting the resistance of R sub 1 and R sub 2. The binary output of the counter is representative of the angle.

  7. A brief history of error.

    PubMed

    Murray, Andrew W

    2011-10-01

    The spindle checkpoint monitors chromosome alignment on the mitotic and meiotic spindle. When the checkpoint detects errors, it arrests progress of the cell cycle while it attempts to correct the mistakes. This perspective will present a brief history summarizing what we know about the checkpoint, and a list of questions we must answer before we understand it. PMID:21968991

  8. Instrumental error in chromotomosynthetic hyperspectral imaging.

    PubMed

    Bostick, Randall L; Perram, Glen P

    2012-07-20

    Chromotomosynthetic imaging (CTI) is a method of convolving spatial and spectral information that can be reconstructed into a hyperspectral image cube using the same transforms employed in medical tomosynthesis. A direct vision prism instrument operating in the visible (400-725 nm) with 0.6 mrad instantaneous field of view (IFOV) and 0.6-10 nm spectral resolution has been constructed and characterized. Reconstruction of hyperspectral data cubes requires an estimation of the instrument component properties that define the forward transform. We analyze the systematic instrumental error in collected projection data resulting from prism spectral dispersion, prism alignment, detector array position, and prism rotation angle. The shifting and broadening of both the spectral lineshape function and the spatial point spread function in the reconstructed hyperspectral imagery is compared with experimental results for monochromatic point sources. The shorter wavelength (λ<500 nm) region where the prism has the highest spectral dispersion suffers mostly from degradation of spectral resolution in the presence of systematic error, while longer wavelengths (λ>600 nm) suffer mostly from a shift of the spectral peaks. The quality of the reconstructed hyperspectral imagery is most sensitive to the misalignment of the prism rotation mount. With less than 1° total angular error in the two axes of freedom, spectral resolution was degraded by as much as a factor of 2 in the blue spectral region. For larger errors than this, spectral peaks begin to split into bimodal distributions, and spatial point response functions are reconstructed in rings with radii proportional to wavelength and spatial resolution. PMID:22858961

  9. Intense laser ionization of transiently aligned CO

    SciTech Connect

    Pinkham, D.; Jones, R.R.

    2005-08-15

    We have measured the ionization rate for CO molecules exposed to intense 30 fsec 780 nm laser pulses as a function of the angle between the molecular and laser polarization axes. Nonionizing, 70 fsec laser pulses are used to coherently prepare the molecules, preferentially aligning them for the strong-field ionization experiments. We find a 2:1 ionization-rate ratio for molecules aligned parallel or perpendicular to the ionizing field.

  10. Fiber optics welder having movable aligning mirror

    DOEpatents

    Higgins, Robert W.; Robichaud, Roger E.

    1981-01-01

    A system for welding fiber optic waveguides together. The ends of the two fibers to be joined together are accurately, collinearly aligned in a vertical orientation and subjected to a controlled, diffuse arc to effect welding and thermal conditioning. A front-surfaced mirror mounted at a 45.degree. angle to the optical axis of a stereomicroscope mounted for viewing the junction of the ends provides two orthogonal views of the interface during the alignment operation.

  11. Alignment and Performance of the Infrared Multi-Object Spectrometer

    NASA Technical Reports Server (NTRS)

    Connelly, Joseph A.; Ohl, Raymond G.; Mentzell, J. Eric; Madison, Timothy J.; Hylan, Jason E.; Mink, Ronald G.; Saha, Timo T.; Tveekrem, June L.; Sparr, Leroy M.; Chambers, V. John; Fitzgerald, Danetter; Greenhouse, Matthew A.; MacKenty, John W.

    2004-01-01

    The Infrared Multi-Object Spectrometer (IRMOS) is a principle investigator class instrument for the Kitt Peak National Observatory 4 and 2.1 meter telescopes. IRMOS is a near-IR (0.8 - 2.5 micron) spectrometer with low-to mid-resolving power (R = 300 - 3000). IRMOS produces simultaneous spectra of approximately 100 objects in its 2.8 x 2.0 arc-min field of view (4 m telescope) using a commercial Micro Electro-Mechanical Systems (MEMS) micro-mirror array (MMA) from Texas Instruments. The IRMOS optical design consists of two imaging subsystems. The focal reducer images the focal plane of the telescope onto the MMA field stop, and the spectrograph images the MMA onto the detector. We describe ambient breadboard subsystem alignment and imaging performance of each stage independently, and ambient imaging performance of the fully assembled instrument. Interferometric measurements of subsystem wavefront error serve as a qualitative alignment guide, and are accomplished using a commercial, modified Twyman-Green laser unequal path interferometer. Image testing provides verification of the optomechanical alignment method and a measurement of near-angle scattered light due to mirror small-scale surface error. Image testing is performed at multiple field points. A mercury-argon pencil lamp provides a spectral line at 546.1 nanometers, a blackbody source provides a line at 1550 nanometers, and a CCD camera and IR camera are used as detectors. We use commercial optical modeling software to predict the point-spread function and its effect on instrument slit transmission and resolution. Our breadboard and instrument level test results validate this prediction. We conclude with an instrument performance prediction for cryogenic operation and first light in late 2003.

  12. Alignment and performance of the Infrared Multi-Object Spectrometer

    NASA Astrophysics Data System (ADS)

    Connelly, Joseph A.; Ohl, Raymond G.; Mentzell, J. E.; Madison, Timothy J.; Hylan, Jason E.; Mink, Ronald G.; Saha, Timo T.; Tveekrem, June L.; Sparr, Leroy M.; Chambers, Victor J.; Fitzgerald, Danette L.; Greenhouse, Matthew A.; MacKenty, John W.

    2003-10-01

    The Infrared Multi-Object Spectrometer (IRMOS) is a principle investigator class instrument for the Kitt Peak National Observatory 4 and 2.1 m telescopes. IRMOS is a near-IR (0.8 2.5 μm) spectrometer with low- to mid-resolving power (R = 300 3000). IRMOS produces simultaneous spectra of ~100 objects in its 2.8 ´ 2.0 arc-min field of view (4 m telescope) using a commercial Micro Electro-Mechanical Systems (MEMS) micro-mirror array (MMA) from Texas Instruments. The IRMOS optical design consists of two imaging subsystems. The focal reducer images the focal plane of the telescope onto the MMA field stop, and the spectrograph images the MMA onto the detector. We describe ambient breadboard subsystem alignment and imaging performance of each stage independently, and ambient imaging performance of the fully assembled instrument. Interferometric measurements of subsystem wavefront error serve as a qualitative alignment guide, and are accomplished using a commercial, modified Twyman-Green laser unequal path interferometer. Image testing provides verification of the optomechanical alignment method and a measurement of near-angle scattered light due to mirror small-scale surface error. Image testing is performed at multiple field points. A mercury-argon pencil lamp provides a spectral line at 546.1 nm, a blackbody source provides a line at 1550 nm, and a CCD camera and IR camera are used as detectors. We use commercial optical modeling software to predict the point-spread function and its effect on instrument slit transmission and resolution. Our breadboard and instrument level test results validate this prediction. We conclude with an instrument performance prediction for cryogenic operation and first light in late 2003.

  13. Total overlay analysis for designing future aligner

    NASA Astrophysics Data System (ADS)

    Magome, Nobutaka; Kawai, Hidemi

    1995-05-01

    We found total overlay with respect to optical lithography using an approach similar to quality control technique employed at a semiconductor factory. This approach involves an aligner performance, process quality, reticle error and overlay measurement. This paper further describes new ides for the number of machines to be used for matching and data collection period. Lastly, improvement on total overlay and a prospective view for a future aligner and its usage are also described.

  14. Medication Errors

    MedlinePlus

    ... to reduce the risk of medication errors to industry and others at FDA. Additionally, DMEPA prospectively reviews ... List of Abbreviations Regulations and Guidances Guidance for Industry: Safety Considerations for Product Design to Minimize Medication ...

  15. Medication Errors

    MedlinePlus

    Medicines cure infectious diseases, prevent problems from chronic diseases, and ease pain. But medicines can also cause harmful reactions if not used ... You can help prevent errors by Knowing your medicines. Keep a list of the names of your ...

  16. A compensation alignment method for surface irregularity based on Zernike coefficients

    NASA Astrophysics Data System (ADS)

    Li, Lian; Ma, TianMeng

    2014-11-01

    Surface irregularity of optical elements is one of the errors caused in manufacturing process. The primary aberration caused by surface irregularity is astigmatism which can hardly be removed in traditional alignment method. An alignment method by rotating the lens for compensating the deterioration of the image quality caused by surface irregularity is put forward in the paper, and the mathematical model of the method is established. The calculation of the rotate angle is described in detail. A numerical simulation of the method has been performed for a four-lens precision optical system to verify the ability and accuracy of the method. The results show that the astigmatism of the optical system caused by the surface irregularity can completely be removed, and the image quality can be improved effectively. The method is especially suitable for the optical system which demands a very high image quality.

  17. Silicon oxides as alignment surfaces for vertically-aligned nematics in photonic devices

    NASA Astrophysics Data System (ADS)

    Oton, E.; López-Andrés, S.; Bennis, N.; Otón, J. M.; Geday, M. A.

    2014-06-01

    A comparative study on alignment performance and microstructure of inorganic layers used for liquid crystal cell conditioning has been carried out. The study has focused on two specific materials, SiOx and SiO2, deposited under different conditions. The purpose was to establish a relationship between layer microstructure and liquid crystal alignment. The surface morphology has been studied by FESEM and AFM. An analysis on liquid crystal alignment, pretilt angle, response time, contrast ratio and the conditions to develop backflow effect (significant rise time increase due to pure homeotropic alignment) on vertically-aligned nematic cells has been carried out. A technique to overcome the presence of backflow has been identified. The full comparative study of SiOx and SiO2 layer properties and their influence over liquid crystal alignment and electrooptic response is presented.

  18. Automated interferometric alignment system for paraboloidal mirrors

    DOEpatents

    Maxey, L. Curtis

    1993-01-01

    A method is described for a systematic method of interpreting interference fringes obtained by using a corner cube retroreflector as an alignment aid when aigning a paraboloid to a spherical wavefront. This is applicable to any general case where such alignment is required, but is specifically applicable in the case of aligning an autocollimating test using a diverging beam wavefront. In addition, the method provides information which can be systematically interpreted such that independent information about pitch, yaw and focus errors can be obtained. Thus, the system lends itself readily to automation. Finally, although the method is developed specifically for paraboloids, it can be seen to be applicable to a variety of other aspheric optics when applied in combination with a wavefront corrector that produces a wavefront which, when reflected from the correctly aligned aspheric surface will produce a collimated wavefront like that obtained from the paraboloid when it is correctly aligned to a spherical wavefront.

  19. Rotational Alignment Altered by Source Position Correlations

    NASA Technical Reports Server (NTRS)

    Jacobs, Chris S.; Heflin, M. B.; Lanyi, G. E.; Sovers, O. J.; Steppe, J. A.

    2010-01-01

    In the construction of modern Celestial Reference Frames (CRFs) the overall rotational alignment is only weakly constrained by the data. Therefore, common practice has been to apply a 3-dimensional No-Net-Rotation (NNR) constraint in order to align an under-construction frame to the ICRF. We present evidence that correlations amongst source position parameters must be accounted for in order to properly align a CRF at the 5-10 (mu)as level of uncertainty found in current work. Failure to do so creates errors at the 10-40 (mu)as level.

  20. Daily Bone Alignment With Limited Repeat CT Correction Rivals Daily Ultrasound Alignment for Prostate Radiotherapy

    SciTech Connect

    O'Daniel, Jennifer C.; Dong Lei Zhang Lifei; Wang He; Tucker, Susan L.; Kudchadker, Rajat J.; Lee, Andrew K.; Cheung, Rex; Cox, James D.; Kuban, Deborah A.; Mohan, Radhe

    2008-05-01

    Purpose: To compare the effectiveness of daily ultrasound (US)- and computed tomography (CT)-guided alignments with an off-line correction protocol using daily bone alignment plus a correction factor for systematic internal prostate displacement (CF{sub ID}). Methods and Materials: Ten prostate cancer patients underwent CT scans three times weekly using an integrated CT-linear accelerator system, followed by alignment using US for daily radiotherapy. Intensity-modulated radiotherapy plans were designed with our current clinical margins. The treatment plan was copied onto the repeat CT images and aligned using several methods: (1) bone alignment plus CF{sub ID} after three off-line CT scans (bone+3CT), (2) bone alignment plus CF{sub ID} after six off-line CT scans (bone+6CT), (3) US alignment, and (4) CT alignment. The accuracy of the repeated US and CT measurements to determine the CF{sub ID} was compared. The target dosimetric effect was quantified. Results: The CF{sub ID} for internal systematic prostate displacements was more accurately measured with limited repeat CT scans than with US (residual error, 0.0 {+-} 0.7 mm vs. 2.0 {+-} 3.2 mm). Bone+3CT, bone+6CT, and US provided equivalent prostate and seminal vesicle dose coverage, but bone+3CT and bone+6CT produced more precise daily alignments. Daily CT alignment provided the greatest target dose coverage. Conclusion: Daily bone alignment plus CF{sub ID} for internal systematic prostate displacement provided better daily alignment precision and equivalent dose coverage compared with daily US alignment. The CF{sub ID} should be based on at least three repeat CT scans, which could be collected before the start of treatment or during the first 3 treatment days. Daily bone alignment plus CF{sub ID} provides another option for accurate prostate cancer patient positioning.

  1. Best Angle to Orient Two Intersecting Lines

    SciTech Connect

    Awwal, A S; Ferguson, S W; Shull, P B

    2006-07-25

    Fiducials in the form of intersecting straight lines are used to align the target in the final target chamber of the National Ignition Facility of Lawrence Livermore National Laboratory. One of the techniques used to locate these lines is the Hough transform. When two lines intersect at a 90 degree angle, it is tempting to orient the lines to horizontal and vertical directions. There are other possible angles at which the lines may be oriented. One question that arises while designing the fiducials is whether there is a preferred angle or range of angles that leads to higher accuracy. This work attempts to answer this question through detailed computer simulation.

  2. Phylogenetic Inference From Conserved sites Alignments

    SciTech Connect

    grundy, W.N.; Naylor, G.J.P.

    1999-08-15

    Molecular sequences provide a rich source of data for inferring the phylogenetic relationships among species. However, recent work indicates that even an accurate multiple alignment of a large sequence set may yield an incorrect phylogeny and that the quality of the phylogenetic tree improves when the input consists only of the highly conserved, motif regions of the alignment. This work introduces two methods of producing multiple alignments that include only the conserved regions of the initial alignment. The first method retains conserved motifs, whereas the second retains individual conserved sites in the initial alignment. Using parsimony analysis on a mitochondrial data set containing 19 species among which the phylogenetic relationships are widely accepted, both conserved alignment methods produce better phylogenetic trees than the complete alignment. Unlike any of the 19 inference methods used before to analyze this data, both methods produce trees that are completely consistent with the known phylogeny. The motif-based method employs far fewer alignment sites for comparable error rates. For a larger data set containing mitochondrial sequences from 39 species, the site-based method produces a phylogenetic tree that is largely consistent with known phylogenetic relationships and suggests several novel placements.

  3. Nearest Alignment Space Termination

    2006-07-13

    Near Alignment Space Termination (NAST) is the Greengenes algorithm that matches up submitted sequences with the Greengenes database to look for similarities and align the submitted sequences based on those similarities.

  4. The relationship between pelvic alignment and dysmenorrhea

    PubMed Central

    Kim, Moon-jeong; Baek, Il-hun; Goo, Bong-oh

    2016-01-01

    [Purpose] The purpose of this study was to investigate the relationship between pelvic alignment and dysmenorrhea in general women. [Subjects and Methods] One hundred two females participated in this study. They were divided into a dysmenorrhea group and a normal group based on the results of a Visual Analogue Scale (VAS) assessment of pain and the Menstrual Distress Questionnaire (MDQ). The survey data was collecting from 5th July to 20th September, 2014. Formetric 4D was used to measure the pelvic alignment, including the values of Trunk Imbalance, Pelvic Tilt, Surface Rotation, Lateral Deviation, Kyphosis Angle, Lordosis Angle. [Results] There was a difference in the spine alignments of each group. The value of pelvic torsion was 2.4 ± 1.8 degree in those with dysmenorrhea, while it was 1.7 ± 1.1 degree in those without. [Conclusion] In conclusion, the results suggest that there is a relationship between menstrual pain and pelvic torsion. PMID:27134354

  5. The Alignment of Galaxy Structures

    NASA Astrophysics Data System (ADS)

    Biernacka, M.; Panko, E.; Bajan, K.; Godłowski, W.; Flin, P.

    2015-11-01

    We analyzed the orientation of the sample of ACO galaxy clusters. We examined the alignment in a subsample of 1056 galaxy structures taken from the Panko-Flin (2006) Catalog with known BM morphological types. We were looking for a correlation between the orientation of the cluster and the positions of neighboring clusters. The Binggeli effect (the excess of small values of the Δθ angles between the direction toward neighboring clusters and the cluster position angle) is observed, having a range up to about 45 h-1 Mpc. The strongest effect was found for elongated BM type I clusters. This is probably connected with the origins of the supergiant galaxy and with cluster formation along a long filament or plane in a supercluster.

  6. Shiva automatic pinhole alignment

    SciTech Connect

    Suski, G.J.

    1980-09-05

    This paper describes a computer controlled closed loop alignment subsystem for Shiva, which represents the first use of video sensors for large laser alignment at LLNL. The techniques used on this now operational subsystem are serving as the basis for all closed loop alignment on Nova, the 200 terawatt successor to Shiva.

  7. Fast statistical alignment.

    PubMed

    Bradley, Robert K; Roberts, Adam; Smoot, Michael; Juvekar, Sudeep; Do, Jaeyoung; Dewey, Colin; Holmes, Ian; Pachter, Lior

    2009-05-01

    We describe a new program for the alignment of multiple biological sequences that is both statistically motivated and fast enough for problem sizes that arise in practice. Our Fast Statistical Alignment program is based on pair hidden Markov models which approximate an insertion/deletion process on a tree and uses a sequence annealing algorithm to combine the posterior probabilities estimated from these models into a multiple alignment. FSA uses its explicit statistical model to produce multiple alignments which are accompanied by estimates of the alignment accuracy and uncertainty for every column and character of the alignment--previously available only with alignment programs which use computationally-expensive Markov Chain Monte Carlo approaches--yet can align thousands of long sequences. Moreover, FSA utilizes an unsupervised query-specific learning procedure for parameter estimation which leads to improved accuracy on benchmark reference alignments in comparison to existing programs. The centroid alignment approach taken by FSA, in combination with its learning procedure, drastically reduces the amount of false-positive alignment on biological data in comparison to that given by other methods. The FSA program and a companion visualization tool for exploring uncertainty in alignments can be used via a web interface at http://orangutan.math.berkeley.edu/fsa/, and the source code is available at http://fsa.sourceforge.net/. PMID:19478997

  8. Alignment tool facilitates pin placement on irregular horizontal surfaces

    NASA Technical Reports Server (NTRS)

    Boyle, J. V.

    1966-01-01

    Alignment tool facilitates spotting and cementing plastic pins on the true vertical to irregular concave and convex surfaces. The tool consists of a wood tripod with individually adjustable legs, a wood block with a hole for placing the pins and two spirit levels at a 90 degree angle for easy alignment.

  9. Mapping local orientation of aligned fibrous scatterers for cancerous tissues using backscattering Mueller matrix imaging

    NASA Astrophysics Data System (ADS)

    He, Honghui; Sun, Minghao; Zeng, Nan; Du, E.; Liu, Shaoxiong; Guo, Yihong; Wu, Jian; He, Yonghong; Ma, Hui

    2014-10-01

    Polarization measurements are sensitive to the microstructure of tissues and can be used to detect pathological changes. Many tissues contain anisotropic fibrous structures. We obtain the local orientation of aligned fibrous scatterers using different groups of the backscattering Mueller matrix elements. Experiments on concentrically well-aligned silk fibers and unstained human papillary thyroid carcinoma tissues show that the m22, m33, m23, and m32 elements have better contrast but higher degeneracy for the extraction of orientation angles. The m12 and m13 elements show lower contrast, but allow us to determine the orientation angle for the fibrous scatterers along all directions. Moreover, Monte Carlo simulations based on the sphere-cylinder scattering model indicate that the oblique incidence of the illumination beam introduces some errors in the orientation angles obtained by both methods. Mapping the local orientation of anisotropic tissues may not only provide information on pathological changes, but can also give new leads to reduce the orientation dependence of polarization measurements.

  10. Alignment Stage for a Cryogenic Dilatometer

    NASA Technical Reports Server (NTRS)

    Dudik, Matthew; Moore, Donald

    2005-01-01

    A three-degree-of-freedom alignment stage has been designed and built for use in a cryogenic dilatometer that is used to measure thermal strains. The alignment stage enables precise adjustments of the positions and orientations of optical components to be used in the measurements and, once adjustments have been completed, keeps the components precisely aligned during cryogenic-dilatometer operations that can last as long as several days. The alignment stage includes a case, a circular tilt/tip platform, and a variety of flexural couplings between the case and the platform, all machined from a single block of the low-thermal-expansion iron/nickel alloy Invar, in order to minimize effects of temperature gradients and to obtain couplings that are free of stiction and friction. There are three sets of flexural couplings clocked at equal angles of 120 degrees around the platform, constituting a three-point kinematic support system.

  11. Girder Alignment Plan

    SciTech Connect

    Wolf, Zackary; Ruland, Robert; LeCocq, Catherine; Lundahl, Eric; Levashov, Yurii; Reese, Ed; Rago, Carl; Poling, Ben; Schafer, Donald; Nuhn, Heinz-Dieter; Wienands, Uli; /SLAC

    2010-11-18

    The girders for the LCLS undulator system contain components which must be aligned with high accuracy relative to each other. The alignment is one of the last steps before the girders go into the tunnel, so the alignment must be done efficiently, on a tight schedule. This note documents the alignment plan which includes efficiency and high accuracy. The motivation for girder alignment involves the following considerations. Using beam based alignment, the girder position will be adjusted until the beam goes through the center of the quadrupole and beam finder wire. For the machine to work properly, the undulator axis must be on this line and the center of the undulator beam pipe must be on this line. The physics reasons for the undulator axis and undulator beam pipe axis to be centered on the beam are different, but the alignment tolerance for both are similar. In addition, the beam position monitor must be centered on the beam to preserve its calibration. Thus, the undulator, undulator beam pipe, quadrupole, beam finder wire, and beam position monitor axes must all be aligned to a common line. All relative alignments are equally important, not just, for example, between quadrupole and undulator. We begin by making the common axis the nominal beam axis in the girder coordinate system. All components will be initially aligned to this axis. A more accurate alignment will then position the components relative to each other, without incorporating the girder itself.

  12. Local alignment of two-base encoded DNA sequence

    PubMed Central

    Homer, Nils; Merriman, Barry; Nelson, Stanley F

    2009-01-01

    Background DNA sequence comparison is based on optimal local alignment of two sequences using a similarity score. However, some new DNA sequencing technologies do not directly measure the base sequence, but rather an encoded form, such as the two-base encoding considered here. In order to compare such data to a reference sequence, the data must be decoded into sequence. The decoding is deterministic, but the possibility of measurement errors requires searching among all possible error modes and resulting alignments to achieve an optimal balance of fewer errors versus greater sequence similarity. Results We present an extension of the standard dynamic programming method for local alignment, which simultaneously decodes the data and performs the alignment, maximizing a similarity score based on a weighted combination of errors and edits, and allowing an affine gap penalty. We also present simulations that demonstrate the performance characteristics of our two base encoded alignment method and contrast those with standard DNA sequence alignment under the same conditions. Conclusion The new local alignment algorithm for two-base encoded data has substantial power to properly detect and correct measurement errors while identifying underlying sequence variants, and facilitating genome re-sequencing efforts based on this form of sequence data. PMID:19508732

  13. Wavefront Aberrations Due to Alignment and Figure Compensation of the NASA James Webb Space Telescope

    NASA Technical Reports Server (NTRS)

    Howard, Joseph

    2007-01-01

    This viewgraph presentation describes wavefront aberrations due to the alignment and improper compensation of the NASA James Webb Space Telescope. The contents include: 1) James Webb Space Telescope (JWST); 2) Optical design of JWST; 3) Alignment Observables for JWST; 4) Low order Zernike Polynomials; 5) PM SM Ability to Target Low Order Aberrations; 6) Compensator definitions and Modes; 7) Field impact from compensation; 8) PM align error compensated by PM figure; 9) PM align error compensated by SM alignment; 10) SM align error compensated by PM figure; 11) SM figure error compensated by SM alignment; 12) Worst Case Pupil Maps; 13) Worst Case Pupil Maps at BEST FOCUS; 14) Field impact from compensation (+/- 1 arcmin FOV); and 15) Concluding Remarks.

  14. Error compensation algorithm for patient positioning robotics system

    NASA Astrophysics Data System (ADS)

    Murty, Pilaka V.; Talpasanu, Ilie; Roz, Mugur A.

    2009-03-01

    Surgeons in various medical areas (orthopedic surgery, neurosurgery, dentistry etc.) are using motor-driven drilling tools to make perforations in hard tissues (bone, enamel, dentine, cementum etc.) When the penetration requires very precise angles and accurate alignment with respect to different targets, precision cannot be obtained by using visual estimation and hand-held tools. Robots have been designed to allow for very accurate relative positioning of the patient and the surgical tools, and in certain classes of applications the location of bone target and inclination of the surgical tool can be accurately specified with respect to an inertial frame of reference. However, patient positioning errors as well as position changes during surgery can jeopardize the precision of the operation, and drilling parameters have to be dynamically adjusted. In this paper the authors present a quantitative method to evaluate the corrected position and inclination of the drilling tool, to account for translational and rotational errors in displaced target position. The compensation algorithm applies principles of inverse kinematics wherein a faulty axis in space caused by the translational and rotational errors of the target position is identified with an imaginary true axis in space by enforcing identity through a modified trajectory. In the absence of any specific application, this algorithm is verified on Solid Works, a commercial CAD tool and found to be correct. An example problem given at the end vindicates this statement.

  15. Galaxy pairs align with Galactic filaments

    NASA Astrophysics Data System (ADS)

    Tempel, E.; Tamm, A.

    2015-04-01

    Context. Gravitational collapse theory and numerical simulations suggest that the velocity field within large-scale galaxy filaments is dominated by motions along the filaments. Aims: Our aim is to check whether observational data reveal any preferred orientation of galaxy pairs with respect to the underlying filaments as a result of the expectedly anisotropic velocity field. Methods: We use galaxy pairs and galaxy filaments identified from Sloan Digital Sky Survey data. For filament extraction, we use the Bisous model that is based on the marked point process technique. During the filament detection, we use the centre point of each pair instead of the positions of galaxies to avoid a built-in influence of pair orientation on the filament construction. For pairs lying within filaments (3012 cases), we calculate the angle between the line connecting the galaxies of each pair and their host filaments. To avoid redshift-space distortions, the angle is measured in the plane of the sky. Results: The alignment analysis shows that the orientation of galaxy pairs correlates strongly with their host filaments. The alignment signal is stronger for loose pairs, with at least 25% excess of aligned pairs compared to a random distribution. The alignment of galaxy pairs and filaments measured from the observational data is in good agreement with the alignment in the Millennium simulation and thus provides support to the ΛCDM formalism.

  16. Telemetry location error in a forested habitat

    USGS Publications Warehouse

    Chu, D.S.; Hoover, B.A.; Fuller, M.R.; Geissler, P.H.

    1989-01-01

    The error associated with locations estimated by radio-telemetry triangulation can be large and variable in a hardwood forest. We assessed the magnitude and cause of telemetry location errors in a mature hardwood forest by using a 4-element Yagi antenna and compass bearings toward four transmitters, from 21 receiving sites. The distance error from the azimuth intersection to known transmitter locations ranged from 0 to 9251 meters. Ninety-five percent of the estimated locations were within 16 to 1963 meters, and 50% were within 99 to 416 meters of actual locations. Angles with 20o of parallel had larger distance errors than other angles. While angle appeared most important, greater distances and the amount of vegetation between receivers and transmitters also contributed to distance error.

  17. BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC

    PubMed Central

    Satija, Rahul; Novák, Ádám; Miklós, István; Lyngsø, Rune; Hein, Jotun

    2009-01-01

    Background We have previously combined statistical alignment and phylogenetic footprinting to detect conserved functional elements without assuming a fixed alignment. Considering a probability-weighted distribution of alignments removes sensitivity to alignment errors, properly accommodates regions of alignment uncertainty, and increases the accuracy of functional element prediction. Our method utilized standard dynamic programming hidden markov model algorithms to analyze up to four sequences. Results We present a novel approach, implemented in the software package BigFoot, for performing phylogenetic footprinting on greater numbers of sequences. We have developed a Markov chain Monte Carlo (MCMC) approach which samples both sequence alignments and locations of slowly evolving regions. We implement our method as an extension of the existing StatAlign software package and test it on well-annotated regions controlling the expression of the even-skipped gene in Drosophila and the α-globin gene in vertebrates. The results exhibit how adding additional sequences to the analysis has the potential to improve the accuracy of functional predictions, and demonstrate how BigFoot outperforms existing alignment-based phylogenetic footprinting techniques. Conclusion BigFoot extends a combined alignment and phylogenetic footprinting approach to analyze larger amounts of sequence data using MCMC. Our approach is robust to alignment error and uncertainty and can be applied to a variety of biological datasets. The source code and documentation are publicly available for download from PMID:19715598

  18. Estimating IMU heading error from SAR images.

    SciTech Connect

    Doerry, Armin Walter

    2009-03-01

    Angular orientation errors of the real antenna for Synthetic Aperture Radar (SAR) will manifest as undesired illumination gradients in SAR images. These gradients can be measured, and the pointing error can be calculated. This can be done for single images, but done more robustly using multi-image methods. Several methods are provided in this report. The pointing error can then be fed back to the navigation Kalman filter to correct for problematic heading (yaw) error drift. This can mitigate the need for uncomfortable and undesired IMU alignment maneuvers such as S-turns.

  19. Horizontal carbon nanotube alignment.

    PubMed

    Cole, Matthew T; Cientanni, Vito; Milne, William I

    2016-09-21

    The production of horizontally aligned carbon nanotubes offers a rapid means of realizing a myriad of self-assembled near-atom-scale technologies - from novel photonic crystals to nanoscale transistors. The ability to reproducibly align anisotropic nanostructures has huge technological value. Here we review the present state-of-the-art in horizontal carbon nanotube alignment. For both in and ex situ approaches, we quantitatively assess the reported linear packing densities alongside the degree of alignment possible for each of these core methodologies. PMID:27546174

  20. Orthodontics and Aligners

    MedlinePlus

    ... Repairing Chipped Teeth Teeth Whitening Tooth-Colored Fillings Orthodontics and Aligners Straighten teeth for a healthier smile. Orthodontics When consumers think about orthodontics, braces are the ...

  1. Tidal alignment of galaxies

    NASA Astrophysics Data System (ADS)

    Blazek, Jonathan; Vlah, Zvonimir; Seljak, Uroš

    2015-08-01

    We develop an analytic model for galaxy intrinsic alignments (IA) based on the theory of tidal alignment. We calculate all relevant nonlinear corrections at one-loop order, including effects from nonlinear density evolution, galaxy biasing, and source density weighting. Contributions from density weighting are found to be particularly important and lead to bias dependence of the IA amplitude, even on large scales. This effect may be responsible for much of the luminosity dependence in IA observations. The increase in IA amplitude for more highly biased galaxies reflects their locations in regions with large tidal fields. We also consider the impact of smoothing the tidal field on halo scales. We compare the performance of this consistent nonlinear model in describing the observed alignment of luminous red galaxies with the linear model as well as the frequently used "nonlinear alignment model," finding a significant improvement on small and intermediate scales. We also show that the cross-correlation between density and IA (the "GI" term) can be effectively separated into source alignment and source clustering, and we accurately model the observed alignment down to the one-halo regime using the tidal field from the fully nonlinear halo-matter cross correlation. Inside the one-halo regime, the average alignment of galaxies with density tracers no longer follows the tidal alignment prediction, likely reflecting nonlinear processes that must be considered when modeling IA on these scales. Finally, we discuss tidal alignment in the context of cosmic shear measurements.

  2. A simple method to control over-alignment in the MAFFT multiple sequence alignment program

    PubMed Central

    Katoh, Kazutaka; Standley, Daron M.

    2016-01-01

    Motivation: We present a new feature of the MAFFT multiple alignment program for suppressing over-alignment (aligning unrelated segments). Conventional MAFFT is highly sensitive in aligning conserved regions in remote homologs, but the risk of over-alignment is recently becoming greater, as low-quality or noisy sequences are increasing in protein sequence databases, due, for example, to sequencing errors and difficulty in gene prediction. Results: The proposed method utilizes a variable scoring matrix for different pairs of sequences (or groups) in a single multiple sequence alignment, based on the global similarity of each pair. This method significantly increases the correctly gapped sites in real examples and in simulations under various conditions. Regarding sensitivity, the effect of the proposed method is slightly negative in real protein-based benchmarks, and mostly neutral in simulation-based benchmarks. This approach is based on natural biological reasoning and should be compatible with many methods based on dynamic programming for multiple sequence alignment. Availability and implementation: The new feature is available in MAFFT versions 7.263 and higher. http://mafft.cbrc.jp/alignment/software/ Contact: katoh@ifrec.osaka-u.ac.jp Supplementary information: Supplementary data are available at Bioinformatics online. PMID:27153688

  3. Development of an Ion Beam Irradiation System for Liquid Crystal Alignment Layer Production

    SciTech Connect

    Matsumoto, Takeshi; Kinoshita, Yuko; Tanii, Masahiro; Tatemichi, Junichi; Konishi, Masashi; Naito, Masao

    2008-11-03

    Ion beam irradiation was employed to produce alignment layers for liquid crystal (LC) displays. The alignment characteristics were compared with those by the conventional rubbing method. Ion incident angle to the films played an important role in LC sample optical qualities. A new ion irradiation method to realize a multi-domain structure for a wide viewing angle was demonstrated.

  4. Sources of error in heterodyne moire deflectometry

    NASA Technical Reports Server (NTRS)

    Decker, Arthur J.; Weiland, Kenneth E.; Stricker, Josef; Weimer, David

    1988-01-01

    Alignment problems, and the accompanying errors, in heterodyne moire deflectometry are considered. A change in the x-directed offset between two states of a phase object causes a constant phase error, and it is noted that the relative x coordinate of the two photographic plates (the two states of the phase object) must be positioned typically within 1 micron to avoid a detectable offset. Possible solutions for assuring the relative alignment of the two deflectograms are considered, including a sandwich technique and a two-color double-exposure implementation.

  5. Moments of inclination error distribution computer program

    NASA Technical Reports Server (NTRS)

    Myler, T. R.

    1981-01-01

    A FORTRAN coded computer program is described which calculates orbital inclination error statistics using a closed-form solution. This solution uses a data base of trajectory errors from actual flights to predict the orbital inclination error statistics. The Scott flight history data base consists of orbit insertion errors in the trajectory parameters - altitude, velocity, flight path angle, flight azimuth, latitude and longitude. The methods used to generate the error statistics are of general interest since they have other applications. Program theory, user instructions, output definitions, subroutine descriptions and detailed FORTRAN coding information are included.

  6. Synthetic aperture interferometry: error analysis

    SciTech Connect

    Biswas, Amiya; Coupland, Jeremy

    2010-07-10

    Synthetic aperture interferometry (SAI) is a novel way of testing aspherics and has a potential for in-process measurement of aspherics [Appl. Opt.42, 701 (2003)].APOPAI0003-693510.1364/AO.42.000701 A method to measure steep aspherics using the SAI technique has been previously reported [Appl. Opt.47, 1705 (2008)].APOPAI0003-693510.1364/AO.47.001705 Here we investigate the computation of surface form using the SAI technique in different configurations and discuss the computational errors. A two-pass measurement strategy is proposed to reduce the computational errors, and a detailed investigation is carried out to determine the effect of alignment errors on the measurement process.

  7. Accuracy Improvement on the Measurement of Human-Joint Angles.

    PubMed

    Meng, Dai; Shoepe, Todd; Vejarano, Gustavo

    2016-03-01

    A measurement technique that decreases the root mean square error (RMSE) of measurements of human-joint angles using a personal wireless sensor network is reported. Its operation is based on virtual rotations of wireless sensors worn by the user, and it focuses on the arm, whose position is measured on 5 degree of freedom (DOF). The wireless sensors use inertial magnetic units that measure the alignment of the arm with the earth's gravity and magnetic fields. Due to the biomechanical properties of human tissue (e.g., skin's elasticity), the sensors' orientation is shifted, and this shift affects the accuracy of measurements. In the proposed technique, the change of orientation is first modeled from linear regressions of data collected from 15 participants at different arm positions. Then, out of eight body indices measured with dual-energy X-ray absorptiometry, the percentage of body fat is found to have the greatest correlation with the rate of change in sensors' orientation. This finding enables us to estimate the change in sensors' orientation from the user's body fat percentage. Finally, an algorithm virtually rotates the sensors using quaternion theory with the objective of reducing the error. The proposed technique is validated with experiments on five different participants. In the DOF, whose error decreased the most, the RMSE decreased from 2.20(°) to 0.87(°). This is an improvement of 60%, and in the DOF whose error decreased the least, the RMSE decreased from 1.64(°) to 1.37(°). This is an improvement of 16%. On an average, the RMSE improved by 44%. PMID:25622331

  8. INTRINSIC ALIGNMENT OF CLUSTER GALAXIES: THE REDSHIFT EVOLUTION

    SciTech Connect

    Hao Jiangang; Kubo, Jeffrey M.; Feldmann, Robert; Annis, James; Johnston, David E.; Lin Huan; McKay, Timothy A.

    2011-10-10

    We present measurements of two types of cluster galaxy alignments based on a volume limited and highly pure ({>=}90%) sample of clusters from the GMBCG catalog derived from Data Release 7 of the Sloan Digital Sky Survey (SDSS DR7). We detect a clear brightest cluster galaxy (BCG) alignment (the alignment of major axis of the BCG toward the distribution of cluster satellite galaxies). We find that the BCG alignment signal becomes stronger as the redshift and BCG absolute magnitude decrease and becomes weaker as BCG stellar mass decreases. No dependence of the BCG alignment on cluster richness is found. We can detect a statistically significant ({>=}3{sigma}) satellite alignment (the alignment of the major axes of the cluster satellite galaxies toward the BCG) only when we use the isophotal fit position angles (P.A.s), and the satellite alignment depends on the apparent magnitudes rather than the absolute magnitudes of the BCGs. This suggests that the detected satellite alignment based on isophotal P.A.s from the SDSS pipeline is possibly due to the contamination from the diffuse light of nearby BCGs. We caution that this should not be simply interpreted as non-existence of the satellite alignment, but rather that we cannot detect them with our current photometric SDSS data. We perform our measurements on both SDSS r-band and i-band data, but do not observe a passband dependence of the alignments.

  9. An implicit spatial memory alignment effect.

    PubMed

    Cerles, Mélanie; Gomez, Alice; Rousset, Stéphane

    2015-09-01

    The memory alignment effect is the advantage of reasoning from a perspective which is aligned with the frame of reference used to encode an environment in memory. It usually occurs when participants have to consciously take a perspective to perform a spatial memory task. The present experiment assesses whether the memory alignment effect can occur without requiring to consciously take a given perspective, when the misaligned perspective is only perceptively provided. In others words, does the memory alignment effect still arise when it is only implicitly prompted? Thirty participants learned a sequence of four objects' positions in a room from a north-as-up survey perspective. During the testing phase, they had to point to the direction of a target object from another object ('the reference') with a fixed north-up orientation. The background behind the reference object displayed either a uniform color (control condition) or a misaligned ground-level perspective. The latter displayed a reference object's position information which was either congruent with the studied environment (congruent misaligned condition) or incongruent (incongruent misaligned condition). Mean pointing errors were higher in the congruent misaligned condition than in the control condition, whereas the incongruent misaligned condition did not differ from the control one. The present study shows that the memory alignment effect can arise without requiring a conscious misaligned perspective taking. Moreover, the perceived misaligned perspective must share the same spatial content as the memorized spatial representation in order to induce an alignment effect. PMID:26233526

  10. SPEAR3 Construction Alignment

    SciTech Connect

    LeCocq, Catherine; Banuelos, Cristobal; Fuss, Brian; Gaudreault, Francis; Gaydosh, Michael; Griffin, Levirt; Imfeld, Hans; McDougal, John; Perry, Michael; Rogers, Michael; /SLAC

    2005-08-17

    An ambitious seven month shutdown of the existing SPEAR2 synchrotron radiation facility was successfully completed in March 2004 when the first synchrotron light was observed in the new SPEAR3 ring, SPEAR3 completely replaced SPEAR2 with new components aligned on a new highly-flat concrete floor. Devices such as magnets and vacuum chambers had to be fiducialized and later aligned on girder rafts that were then placed into the ring over pre-aligned support plates. Key to the success of aligning this new ring was to ensure that the new beam orbit matched the old SPEAR2 orbit so that existing experimental beamlines would not have to be reoriented. In this presentation a pictorial summary of the Alignment Engineering Group's surveying tasks for the construction of the SPEAR3 ring is provided. Details on the networking and analysis of various surveys throughout the project can be found in the accompanying paper.

  11. Large field distributed aperture laser semiactive angle measurement system design with imaging fiber bundles.

    PubMed

    Xu, Chunyun; Cheng, Haobo; Feng, Yunpeng; Jing, Xiaoli

    2016-09-01

    A type of laser semiactive angle measurement system is designed for target detecting and tracking. Only one detector is used to detect target location from four distributed aperture optical systems through a 4×1 imaging fiber bundle. A telecentric optical system in image space is designed to increase the efficiency of imaging fiber bundles. According to the working principle of a four-quadrant (4Q) detector, fiber diamond alignment is adopted between an optical system and a 4Q detector. The structure of the laser semiactive angle measurement system is, we believe, novel. Tolerance analysis is carried out to determine tolerance limits of manufacture and installation errors of the optical system. The performance of the proposed method is identified by computer simulations and experiments. It is demonstrated that the linear region of the system is ±12°, with measurement error of better than 0.2°. In general, this new system can be used with large field of view and high accuracy, providing an efficient, stable, and fast method for angle measurement in practical situations. PMID:27607276

  12. Solar Tracking Error Analysis of Fresnel Reflector

    PubMed Central

    Zheng, Jiantao; Yan, Junjie; Pei, Jie; Liu, Guanjie

    2014-01-01

    Depending on the rotational structure of Fresnel reflector, the rotation angle of the mirror was deduced under the eccentric condition. By analyzing the influence of the sun tracking rotation angle error caused by main factors, the change rule and extent of the influence were revealed. It is concluded that the tracking errors caused by the difference between the rotation axis and true north meridian, at noon, were maximum under certain conditions and reduced at morning and afternoon gradually. The tracking error caused by other deviations such as rotating eccentric, latitude, and solar altitude was positive at morning, negative at afternoon, and zero at a certain moment of noon. PMID:24895664

  13. STAR: ultrafast universal RNA-seq aligner

    PubMed Central

    Dobin, Alexander; Davis, Carrie A.; Schlesinger, Felix; Drenkow, Jorg; Zaleski, Chris; Jha, Sonali; Batut, Philippe; Chaisson, Mark; Gingeras, Thomas R.

    2013-01-01

    Motivation: Accurate alignment of high-throughput RNA-seq data is a challenging and yet unsolved problem because of the non-contiguous transcript structure, relatively short read lengths and constantly increasing throughput of the sequencing technologies. Currently available RNA-seq aligners suffer from high mapping error rates, low mapping speed, read length limitation and mapping biases. Results: To align our large (>80 billon reads) ENCODE Transcriptome RNA-seq dataset, we developed the Spliced Transcripts Alignment to a Reference (STAR) software based on a previously undescribed RNA-seq alignment algorithm that uses sequential maximum mappable seed search in uncompressed suffix arrays followed by seed clustering and stitching procedure. STAR outperforms other aligners by a factor of >50 in mapping speed, aligning to the human genome 550 million 2 × 76 bp paired-end reads per hour on a modest 12-core server, while at the same time improving alignment sensitivity and precision. In addition to unbiased de novo detection of canonical junctions, STAR can discover non-canonical splices and chimeric (fusion) transcripts, and is also capable of mapping full-length RNA sequences. Using Roche 454 sequencing of reverse transcription polymerase chain reaction amplicons, we experimentally validated 1960 novel intergenic splice junctions with an 80–90% success rate, corroborating the high precision of the STAR mapping strategy. Availability and implementation: STAR is implemented as a standalone C++ code. STAR is free open source software distributed under GPLv3 license and can be downloaded from http://code.google.com/p/rna-star/. Contact: dobin@cshl.edu. PMID:23104886

  14. Effect of Transducer Orientation on Errors in Ultrasound Image-Based Measurements of Human Medial Gastrocnemius Muscle Fascicle Length and Pennation

    PubMed Central

    Gandevia, Simon C.; Herbert, Robert D.

    2016-01-01

    Ultrasound imaging is often used to measure muscle fascicle lengths and pennation angles in human muscles in vivo. Theoretically the most accurate measurements are made when the transducer is oriented so that the image plane aligns with muscle fascicles and, for measurements of pennation, when the image plane also intersects the aponeuroses perpendicularly. However this orientation is difficult to achieve and usually there is some degree of misalignment. Here, we used simulated ultrasound images based on three-dimensional models of the human medial gastrocnemius, derived from magnetic resonance and diffusion tensor images, to describe the relationship between transducer orientation and measurement errors. With the transducer oriented perpendicular to the surface of the leg, the error in measurement of fascicle lengths was about 0.4 mm per degree of misalignment of the ultrasound image with the muscle fascicles. If the transducer is then tipped by 20°, the error increases to 1.1 mm per degree of misalignment. For a given degree of misalignment of muscle fascicles with the image plane, the smallest absolute error in fascicle length measurements occurs when the transducer is held perpendicular to the surface of the leg. Misalignment of the transducer with the fascicles may cause fascicle length measurements to be underestimated or overestimated. Contrary to widely held beliefs, it is shown that pennation angles are always overestimated if the image is not perpendicular to the aponeurosis, even when the image is perfectly aligned with the fascicles. An analytical explanation is provided for this finding. PMID:27294280

  15. Alignment and focusing tolerance influences on optical performance

    SciTech Connect

    Cross, E.W.

    1982-01-01

    Alignment errors among components of an optical system may substantially degrade the image quality. Focus errors also affect system performance. The potential for serious degradation of image quality is substantial and requires that the tolerances for these errors receive significant attention early in system design. The image quality and reconnaissance performance of an all-reflecting Cassegrain is compared to an all-refractive optical system under conditions of zero and anticipated real world misalignments.

  16. Rotation-invariant texture retrieval via signature alignment based on steerable sub-Gaussian modeling.

    PubMed

    Tzagkarakis, George; Beferull-Lozano, Baltasar; Tsakalides, Panagiotis

    2008-07-01

    This paper addresses the construction of a novel efficient rotation-invariant texture retrieval method that is based on the alignment in angle of signatures obtained via a steerable sub-Gaussian model. In our proposed scheme, we first construct a steerable multivariate sub-Gaussian model, where the fractional lower-order moments of a given image are associated with those of its rotated versions. The feature extraction step consists of estimating the so-called covariations between the orientation subbands of the corresponding steerable pyramid at the same or at adjacent decomposition levels and building an appropriate signature that can be rotated directly without the need of rotating the image and recalculating the signature. The similarity measurement between two images is performed using a matrix-based norm that includes a signature alignment in angle between the images being compared, achieving in this way the desired rotation-invariance property. Our experimental results show how this retrieval scheme achieves a lower average retrieval error, as compared to previously proposed methods having a similar computational complexity, while at the same time being competitive with the best currently known state-of-the-art retrieval system. In conclusion, our retrieval method provides the best compromise between complexity and average retrieval performance. PMID:18586628

  17. Dimensionality reduction via locally reconstructive patch alignment

    NASA Astrophysics Data System (ADS)

    Chen, Yi; Yin, Jun; Zhu, Jie; Jin, Zhong

    2012-07-01

    Based on the local patch concept, we proposed locally reconstructive patch alignment (LRPA) for dimensionality reduction. For each patch, LRPA aims to find the low-dimensional subspace in which the reconstruction error of the within-class nearest neighbors is minimized and the reconstruction error of the between-class nearest neighbors is maximized. LRPA preserves the local structure hidden in the high-dimensional space. More importantly, LRPA has natural connections with linear regression classification (LRC). While LRC uses reconstruction errors as the classification rule, a sample can be classified correctly when the within-class reconstruction error is minimal. The goal of LRPA makes it cooperate well with LRC. The experimental results on the extended Yale B (YALE-B), AR, PolyU finger knuckle print, and the palm print databases demonstrate LRPA plus LRC is an effective and robust pattern-recognition system.

  18. BBMap: A Fast, Accurate, Splice-Aware Aligner

    SciTech Connect

    Bushnell, Brian

    2014-03-17

    Alignment of reads is one of the primary computational tasks in bioinformatics. Of paramount importance to resequencing, alignment is also crucial to other areas - quality control, scaffolding, string-graph assembly, homology detection, assembly evaluation, error-correction, expression quantification, and even as a tool to evaluate other tools. An optimal aligner would greatly improve virtually any sequencing process, but optimal alignment is prohibitively expensive for gigabases of data. Here, we will present BBMap [1], a fast splice-aware aligner for short and long reads. We will demonstrate that BBMap has superior speed, sensitivity, and specificity to alternative high-throughput aligners bowtie2 [2], bwa [3], smalt, [4] GSNAP [5], and BLASR [6].

  19. Projection approach to complexity reduction in tomographic alignment of extremely large telescopes.

    PubMed

    Piatrou, Piotr; Chanan, Gary

    2012-02-20

    We describe a complexity reduction approach intended to solve the tomographic alignment problem for the Thirty Meter Telescope by means of its alignment and phasing system (APS) with little loss of information. This approach is computationally efficient enough to perform detailed Monte-Carlo simulations of the APS on a standard PC. We present sample simulations to model error propagation through the system and to build a preliminary APS alignment error budget. PMID:22358159

  20. Tunable pretilt angles based on nanoparticles-doped planar liquid-crystal cells.

    PubMed

    Jeng, Shie-Chang; Hwang, Shug-June; Yang, Chen-Yu

    2009-02-15

    The nanoparticles-induced vertical alignment technique was applied to generate variable liquid-crystal pretilt angles based on doping different concentrations of polyhedral oligomeric silsesquioxane (POSS) nanoparticles in the planar-aligned liquid crystal cells. Competition between the homogeneously aligned polyimide layer and POSS-induced spontaneous vertical alignment domain generated the variable pretilt angle. Experimental results demonstrated that the pretilt angle theta(p) is a function of the doped POSS concentration and can be controlled continuously over the range of 0 degrees

  1. Precision alignment device

    DOEpatents

    Jones, N.E.

    1988-03-10

    Apparatus for providing automatic alignment of beam devices having an associated structure for directing, collimating, focusing, reflecting, or otherwise modifying the main beam. A reference laser is attached to the structure enclosing the main beam producing apparatus and produces a reference beam substantially parallel to the main beam. Detector modules containing optical switching devices and optical detectors are positioned in the path of the reference beam and are effective to produce an electrical output indicative of the alignment of the main beam. This electrical output drives servomotor operated adjustment screws to adjust the position of elements of the structure associated with the main beam to maintain alignment of the main beam. 5 figs.

  2. Precision alignment device

    DOEpatents

    Jones, Nelson E.

    1990-01-01

    Apparatus for providing automatic alignment of beam devices having an associated structure for directing, collimating, focusing, reflecting, or otherwise modifying the main beam. A reference laser is attached to the structure enclosing the main beam producing apparatus and produces a reference beam substantially parallel to the main beam. Detector modules containing optical switching devices and optical detectors are positioned in the path of the reference beam and are effective to produce an electrical output indicative of the alignment of the main beam. This electrical output drives servomotor operated adjustment screws to adjust the position of elements of the structure associated with the main beam to maintain alignment of the main beam.

  3. Hybrid vehicle motor alignment

    DOEpatents

    Levin, Michael Benjamin

    2001-07-03

    A rotor of an electric motor for a motor vehicle is aligned to an axis of rotation for a crankshaft of an internal combustion engine having an internal combustion engine and an electric motor. A locator is provided on the crankshaft, a piloting tool is located radially by the first locator to the crankshaft. A stator of the electric motor is aligned to a second locator provided on the piloting tool. The stator is secured to the engine block. The rotor is aligned to the crankshaft and secured thereto.

  4. The Alignment of the Mean Wind and Stress Vectors in the Unstable Surface Layer

    NASA Astrophysics Data System (ADS)

    Bernardes, M.; Dias, N. L.

    2010-01-01

    A significant non-alignment between the mean horizontal wind vector and the stress vector was observed for turbulence measurements both above the water surface of a large lake, and over a land surface (soybean crop). Possible causes for this discrepancy such as flow distortion, averaging times and the procedure used for extracting the turbulent fluctuations (low-pass filtering and filter widths etc.), were dismissed after a detailed analysis. Minimum averaging times always less than 30 min were established by calculating ogives, and error bounds for the turbulent stresses were derived with three different approaches, based on integral time scales (first-crossing and lag-window estimates) and on a bootstrap technique. It was found that the mean absolute value of the angle between the mean wind and stress vectors is highly related to atmospheric stability, with the non-alignment increasing distinctively with increasing instability. Given a coordinate rotation that aligns the mean wind with the x direction, this behaviour can be explained by the growth of the relative error of the u- w component with instability. As a result, under more unstable conditions the u- w and the v- w components become of the same order of magnitude, and the local stress vector gives the impression of being non-aligned with the mean wind vector. The relative error of the v- w component is large enough to make it undistinguishable from zero throughout the range of stabilities. Therefore, the standard assumptions of Monin-Obukhov similarity theory hold: it is fair to assume that the v- w stress component is actually zero, and that the non-alignment is a purely statistical effect. An analysis of the dimensionless budgets of the u- w and the v- w components confirms this interpretation, with both shear and buoyant production of u- w decreasing with increasing instability. In the v- w budget, shear production is zero by definition, while buoyancy displays very low-intensity fluctuations around

  5. CSA: An efficient algorithm to improve circular DNA multiple alignment

    PubMed Central

    Fernandes, Francisco; Pereira, Luísa; Freitas, Ana T

    2009-01-01

    Background The comparison of homologous sequences from different species is an essential approach to reconstruct the evolutionary history of species and of the genes they harbour in their genomes. Several complete mitochondrial and nuclear genomes are now available, increasing the importance of using multiple sequence alignment algorithms in comparative genomics. MtDNA has long been used in phylogenetic analysis and errors in the alignments can lead to errors in the interpretation of evolutionary information. Although a large number of multiple sequence alignment algorithms have been proposed to date, they all deal with linear DNA and cannot handle directly circular DNA. Researchers interested in aligning circular DNA sequences must first rotate them to the "right" place using an essentially manual process, before they can use multiple sequence alignment tools. Results In this paper we propose an efficient algorithm that identifies the most interesting region to cut circular genomes in order to improve phylogenetic analysis when using standard multiple sequence alignment algorithms. This algorithm identifies the largest chain of non-repeated longest subsequences common to a set of circular mitochondrial DNA sequences. All the sequences are then rotated and made linear for multiple alignment purposes. To evaluate the effectiveness of this new tool, three different sets of mitochondrial DNA sequences were considered. Other tests considering randomly rotated sequences were also performed. The software package Arlequin was used to evaluate the standard genetic measures of the alignments obtained with and without the use of the CSA algorithm with two well known multiple alignment algorithms, the CLUSTALW and the MAVID tools, and also the visualization tool SinicView. Conclusion The results show that a circularization and rotation pre-processing step significantly improves the efficiency of public available multiple sequence alignment algorithms when used in the

  6. System Would Keep Telescope Reflector Segments Aligned

    NASA Technical Reports Server (NTRS)

    Mettler, Edward; Eldred, Daniel B.; Briggs, Hugh C.; Agronin, Michael L.; Kiceniuk, Taras

    1991-01-01

    Proposed actuation system maintains alignments of reflector segments of large telescope. Sensors measure positions and orientations of segments. Figure-control computer calculates orientation and figure of overall reflector surface from sensor data. Responding to computer output, servocontroller for each actuator corrects piston and tilt errors of each segment. Actuators adjust segments in response to sensed positions. Concept applicable to such large segmented space-based reflectors as those used in communication and in collection of solar energy.

  7. [Diagnostic Errors in Medicine].

    PubMed

    Buser, Claudia; Bankova, Andriyana

    2015-12-01

    The recognition of diagnostic errors in everyday practice can help improve patient safety. The most common diagnostic errors are the cognitive errors, followed by system-related errors and no fault errors. The cognitive errors often result from mental shortcuts, known as heuristics. The rate of cognitive errors can be reduced by a better understanding of heuristics and the use of checklists. The autopsy as a retrospective quality assessment of clinical diagnosis has a crucial role in learning from diagnostic errors. Diagnostic errors occur more often in primary care in comparison to hospital settings. On the other hand, the inpatient errors are more severe than the outpatient errors. PMID:26649954

  8. The dynamic nature of alignment and variations in normal knees.

    PubMed

    Deep, K; Eachempati, K K; Apsingi, S

    2015-04-01

    The restoration of knee alignment is an important goal during total knee arthroplasty (TKA). In the past surgeons aimed to restore neutral limb alignment during surgery. However, previous studies have demonstrated alignment to be dynamic, varying depending on the position of the limb and the degree of weight-bearing, and between patients. We used a validated computer navigation system to measure the femorotibial mechanical angle (FTMA) in 264 knees in 77 male and 55 female healthy volunteers aged 18 to 35 years (mean 26.2). We found the mean supine alignment to be a varus angle of 1.2° (standard deviation (sd) 4), with few patients having neutral alignment. FTMA differs significantly between males and females (with a mean varus of 1.7° (sd 4) and 0.4° (sd 3.9), respectively; p = 0.008). It changes significantly with posture, the knee hyperextending by a mean of 5.6°, and coronal plane alignment becoming more varus by 2.2° (sd 3.6) on standing compared with supine. Knee alignment is different in different individuals and is dynamic in nature, changing with different postures. This may have implications for the assessment of alignment in TKA, which is achieved in non-weight-bearing conditions and which may not represent the situation observed during weight-bearing. PMID:25820888

  9. Antares alignment gimbal positioner

    SciTech Connect

    Day, R.D.; Viswanathan, V.K.; Saxman, A.C.; Lujan, R.E.; Woodfin, G.L.; Sweatt, W.C.

    1981-01-01

    Antares is a 24-beam 40-TW carbon-dioxide (CO/sub 2/) laser fusion system currently under construction at the Los Alamos National Laboratory. The Antares alignment gimbal positioner (AGP) is an optomechanical instrument that will be used for target alignment and alignment of the 24 laser beams, as well as beam quality assessments. The AGP will be capable of providing pointing, focusing, and wavefront optical path difference, as well as aberration information at both helium-neon (He-Ne) and CO/sub 2/ wavelengths. It is designed to allow the laser beams to be aligned to any position within a 1-cm cube to a tolerance of 10 ..mu..m.

  10. Refinement by shifting secondary structure elements improves sequence alignments.

    PubMed

    Tong, Jing; Pei, Jimin; Otwinowski, Zbyszek; Grishin, Nick V

    2015-03-01

    Constructing a model of a query protein based on its alignment to a homolog with experimentally determined spatial structure (the template) is still the most reliable approach to structure prediction. Alignment errors are the main bottleneck for homology modeling when the query is distantly related to the template. Alignment methods often misalign secondary structural elements by a few residues. Therefore, better alignment solutions can be found within a limited set of local shifts of secondary structures. We present a refinement method to improve pairwise sequence alignments by evaluating alignment variants generated by local shifts of template-defined secondary structures. Our method SFESA is based on a novel scoring function that combines the profile-based sequence score and the structure score derived from residue contacts in a template. Such a combined score frequently selects a better alignment variant among a set of candidate alignments generated by local shifts and leads to overall increase in alignment accuracy. Evaluation of several benchmarks shows that our refinement method significantly improves alignments made by automatic methods such as PROMALS, HHpred and CNFpred. The web server is available at http://prodata.swmed.edu/sfesa. PMID:25546158

  11. Refinement by shifting secondary structure elements improves sequence alignments

    PubMed Central

    Tong, Jing; Pei, Jimin; Otwinowski, Zbyszek; Grishin, Nick V.

    2015-01-01

    Constructing a model of a query protein based on its alignment to a homolog with experimentally determined spatial structure (the template) is still the most reliable approach to structure prediction. Alignment errors are the main bottleneck for homology modeling when the query is distantly related to the template. Alignment methods often misalign secondary structural elements by a few residues. Therefore, better alignment solutions can be found within a limited set of local shifts of secondary structures. We present a refinement method to improve pairwise sequence alignments by evaluating alignment variants generated by local shifts of template-defined secondary structures. Our method SFESA is based on a novel scoring function that combines the profile-based sequence score and the structure score derived from residue contacts in a template. Such a combined score frequently selects a better alignment variant among a set of candidate alignments generated by local shifts and leads to overall increase in alignment accuracy. Evaluation of several benchmarks shows that our refinement method significantly improves alignments made by automatic methods such as PROMALS, HHpred and CNFpred. The web server is available at http://prodata.swmed.edu/sfesa. PMID:25546158

  12. Pairwise Sequence Alignment Library

    2015-05-20

    Vector extensions, such as SSE, have been part of the x86 CPU since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprintmore » that features complex data dependencies. The trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. Therefore, a novel SIMD implementation of a parallel scan-based sequence alignment algorithm that can better exploit wider SIMD units was implemented as part of the Parallel Sequence Alignment Library (parasail). Parasail features: Reference implementations of all known vectorized sequence alignment approaches. Implementations of Smith Waterman (SW), semi-global (SG), and Needleman Wunsch (NW) sequence alignment algorithms. Implementations across all modern CPU instruction sets including AVX2 and KNC. Language interfaces for C/C++ and Python.« less

  13. Pairwise Sequence Alignment Library

    SciTech Connect

    Jeff Daily, PNNL

    2015-05-20

    Vector extensions, such as SSE, have been part of the x86 CPU since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprint that features complex data dependencies. The trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. Therefore, a novel SIMD implementation of a parallel scan-based sequence alignment algorithm that can better exploit wider SIMD units was implemented as part of the Parallel Sequence Alignment Library (parasail). Parasail features: Reference implementations of all known vectorized sequence alignment approaches. Implementations of Smith Waterman (SW), semi-global (SG), and Needleman Wunsch (NW) sequence alignment algorithms. Implementations across all modern CPU instruction sets including AVX2 and KNC. Language interfaces for C/C++ and Python.

  14. Impact of Measurement Error on Synchrophasor Applications

    SciTech Connect

    Liu, Yilu; Gracia, Jose R.; Ewing, Paul D.; Zhao, Jiecheng; Tan, Jin; Wu, Ling; Zhan, Lingwei

    2015-07-01

    Phasor measurement units (PMUs), a type of synchrophasor, are powerful diagnostic tools that can help avert catastrophic failures in the power grid. Because of this, PMU measurement errors are particularly worrisome. This report examines the internal and external factors contributing to PMU phase angle and frequency measurement errors and gives a reasonable explanation for them. It also analyzes the impact of those measurement errors on several synchrophasor applications: event location detection, oscillation detection, islanding detection, and dynamic line rating. The primary finding is that dynamic line rating is more likely to be influenced by measurement error. Other findings include the possibility of reporting nonoscillatory activity as an oscillation as the result of error, failing to detect oscillations submerged by error, and the unlikely impact of error on event location and islanding detection.

  15. On the combination procedure of correlated errors

    NASA Astrophysics Data System (ADS)

    Erler, Jens

    2015-09-01

    When averages of different experimental determinations of the same quantity are computed, each with statistical and systematic error components, then frequently the statistical and systematic components of the combined error are quoted explicitly. These are important pieces of information since statistical errors scale differently and often more favorably with the sample size than most systematical or theoretical errors. In this communication we describe a transparent procedure by which the statistical and systematic error components of the combination uncertainty can be obtained. We develop a general method and derive a general formula for the case of Gaussian errors with or without correlations. The method can easily be applied to other error distributions, as well. For the case of two measurements, we also define disparity and misalignment angles, and discuss their relation to the combination weight factors.

  16. Effect of alignment and tolerances on reverse raytrace calibration

    NASA Astrophysics Data System (ADS)

    Heideman, Kyle C.; Greivenkamp, John E.

    2014-07-01

    There are several sources of error in interferometry to consider when testing surfaces in a non-null configuration. A model of the interferometer is typically used to calibrate these errors, but the model differs from the actual interferometer due to the alignment and tolerance of individual components. Reverse raytrace calibration using a model that differs from the real system corrects some errors but introduces others. Reverse optimization using measurements from known test configurations or configuration changes can produce a model that better reflects the real system. This paper addresses the tolerances required to obtain calibration precision from reverse ray tracing. The sources of error can be separated in a way that allows the amount of correction to be compared to the generated errors from misalignment. These errors can be expressed in a generic way that can be applied to any arbitrary interferometer architecture or test surface shape. The simulation results of a standard interferometer with standard tolerances shows that errors corrected by reverse ray tracing can be on the same order as the errors generated by reverse ray tracing an incorrect model. The efficacy of the calibration method resides in correction of other errors such as distortion and ray intercept coordinate error. These corrections are much larger than misalignment errors for surfaces with large departures. This method can be used to determine the level of interferometer component alignment required to accurately measure large departure surfaces with reverse ray tracing.

  17. Multiple structure alignment with msTALI

    PubMed Central

    2012-01-01

    Background Multiple structure alignments have received increasing attention in recent years as an alternative to multiple sequence alignments. Although multiple structure alignment algorithms can potentially be applied to a number of problems, they have primarily been used for protein core identification. A method that is capable of solving a variety of problems using structure comparison is still absent. Here we introduce a program msTALI for aligning multiple protein structures. Our algorithm uses several informative features to guide its alignments: torsion angles, backbone Cα atom positions, secondary structure, residue type, surface accessibility, and properties of nearby atoms. The algorithm allows the user to weight the types of information used to generate the alignment, which expands its utility to a wide variety of problems. Results msTALI exhibits competitive results on 824 families from the Homstrad and SABmark databases when compared to Matt and Mustang. We also demonstrate success at building a database of protein cores using 341 randomly selected CATH domains and highlight the contribution of msTALI compared to the CATH classifications. Finally, we present an example applying msTALI to the problem of detecting hinges in a protein undergoing rigid-body motion. Conclusions msTALI is an effective algorithm for multiple structure alignment. In addition to its performance on standard comparison databases, it utilizes clear, informative features, allowing further customization for domain-specific applications. The C++ source code for msTALI is available for Linux on the web at http://ifestos.cse.sc.edu/mstali. PMID:22607234

  18. Parameterized BLOSUM Matrices for Protein Alignment.

    PubMed

    Song, Dandan; Chen, Jiaxing; Chen, Guang; Li, Ning; Li, Jin; Fan, Jun; Bu, Dongbo; Li, Shuai Cheng

    2015-01-01

    Protein alignment is a basic step for many molecular biology researches. The BLOSUM matrices, especially BLOSUM62, are the de facto standard matrices for protein alignments. However, after widely utilization of the matrices for 15 years, programming errors were surprisingly found in the initial version of source codes for their generation. And amazingly, after bug correction, the "intended" BLOSUM62 matrix performs consistently worse than the "miscalculated" one. In this paper, we find linear relationships among the eigenvalues of the matrices and propose an algorithm to find optimal unified eigenvectors. With them, we can parameterize matrix BLOSUMx for any given variable x that could change continuously. We compare the effectiveness of our parameterized isentropic matrix with BLOSUM62. Furthermore, an iterative alignment and matrix selection process is proposed to adaptively find the best parameter and globally align two sequences. Experiments are conducted on aligning 13,667 families of Pfam database and on clustering MHC II protein sequences, whose improved accuracy demonstrates the effectiveness of our proposed method. PMID:26357279

  19. Large Telescope Segmented Primary Mirror Alignment

    NASA Technical Reports Server (NTRS)

    Rud, Mayer

    2010-01-01

    A document discusses a broadband (white light) point source, located at the telescope Cassegrain focus, which generates a cone of light limited by the hole in the secondary mirror (SM). It propagates to the aspheric null-mirror, which is optimized to make all the reflected rays to be normal to the primary mirror (PM) upon reflection. PM retro-reflects the rays back through the system for wavefront analysis. The point source and the wavefront analysis subsystems are all located behind the PM. The PM phasing is absolute (white light) and does not involve the SM. A relatively small, aspheric null-mirror located near the PM center of curvature has been designed to deliver the high level of optical wavefront correction. The phasing of the segments is absolute due to the use of a broadband source. The segmented PM is optically aligned independently and separately from the SM alignment. The separation of the PM segments alignment from the PM to the SM, and other telescope optics alignments, may be a significant advantage, eliminating the errors coupling. The point source of this concept is fully cooperative, unlike a star or laser-generated guide-star, providing the necessary brightness for the optimal S/N ratio, the spectral content, and the stable on-axis position. This concept can be implemented in the lab for the PM initial alignment, or made to be a permanent feature of the space-based or groundbased telescope.

  20. PDV Probe Alignment Technique

    SciTech Connect

    Whitworth, T L; May, C M; Strand, O T

    2007-10-26

    This alignment technique was developed while performing heterodyne velocimetry measurements at LLNL. There are a few minor items needed, such as a white card with aperture in center, visible alignment laser, IR back reflection meter, and a microscope to view the bridge surface. The work was performed on KCP flyers that were 6 and 8 mils wide. The probes used were Oz Optics manufactured with focal distances of 42mm and 26mm. Both probes provide a spot size of approximately 80?m at 1550nm. The 42mm probes were specified to provide an internal back reflection of -35 to -40dB, and the probe back reflections were measured to be -37dB and -33dB. The 26mm probes were specified as -30dB and both measured -30.5dB. The probe is initially aligned normal to the flyer/bridge surface. This provides a very high return signal, up to -2dB, due to the bridge reflectivity. A white card with a hole in the center as an aperture can be used to check the reflected beam position relative to the probe and launch beam, and the alignment laser spot centered on the bridge, see Figure 1 and Figure 2. The IR back reflection meter is used to measure the dB return from the probe and surface, and a white card or similar object is inserted between the probe and surface to block surface reflection. It may take several iterations between the visible alignment laser and the IR back reflection meter to complete this alignment procedure. Once aligned normal to the surface, the probe should be tilted to position the visible alignment beam as shown in Figure 3, and the flyer should be translated in the X and Y axis to reposition the alignment beam onto the flyer as shown in Figure 4. This tilting of the probe minimizes the amount of light from the bridge reflection into the fiber within the probe while maintaining the alignment as near normal to the flyer surface as possible. When the back reflection is measured after the tilt adjustment, the level should be about -3dB to -6dB higher than the probes

  1. Curriculum Alignment Research Suggests that Alignment Can Improve Student Achievement

    ERIC Educational Resources Information Center

    Squires, David

    2012-01-01

    Curriculum alignment research has developed showing the relationship among three alignment categories: the taught curriculum, the tested curriculum and the written curriculum. Each pair (for example, the taught and the written curriculum) shows a positive impact for aligning those results. Following this, alignment results from the Third…

  2. Alignment of cD-galaxies with their surroundings

    NASA Technical Reports Server (NTRS)

    Vankampen, Eelco; Rhee, George

    1990-01-01

    For a sample of 122 rich Abell clusters the authors find a strong correlation of the position angle (orientation) of the first-ranked galaxy and its parent cluster. This alignment effect is strongest for cD-galaxies. Formation scenarios for cD galaxies, like the merging scenario, must produce such a strong alignment effect. The authors show some N-body simulations done for this purpose.

  3. Azimuthal and polar angle dependence of L X-ray differential cross-sections of Yb at 59.54 keV photon energy

    NASA Astrophysics Data System (ADS)

    Akkuş, T.; Şahin, Y.; Yılmaz, D.

    2016-01-01

    The azimuthal and polar angle dependence of L X-ray was investigated in the same experimental setup to remove the existing ambiguity about alignments measurements. We measured Ll, Lα, Lβ and Lγ X-ray differential cross sections of Yb for several different azimuthal angles (30°, 20°, 10°, 0°, -10° and -20°) and polar angles (90°, 100°, 110°, 120°, 130° and 140°) at 59.54 keV photon energy by using a Si(Li) detector. The azimuthal angle dependence of Ll and Lα X-rays were observed. The azimuthal anisotropy of Lβ and Lγ X-rays were not observed. On the other hand, differential cross-sections for Lβ and Lγ X-rays were found independent on the polar angle within experimental error, those for Ll and Lα X-rays depended on the polar angles. Azimuthal and polar angles dependence of L X-ray differential cross-sections contrast with the other experimental and theoretical results, which report evidence of the isotropic emission of Ll and Lα X-rays following photoionization.

  4. Optimized mirror shape tuning using beam weightings based on distance, angle of incidence, reflectivity, and power.

    PubMed

    Goldberg, Kenneth A; Yashchuk, Valeriy V

    2016-05-01

    For glancing-incidence optical systems, such as short-wavelength optics used for nano-focusing, incorporating physical factors in the calculations used for shape optimization can improve performance. Wavefront metrology, including the measurement of a mirror's shape or slope, is routinely used as input for mirror figure optimization on mirrors that can be bent, actuated, positioned, or aligned. Modeling shows that when the incident power distribution, distance from focus, angle of incidence, and the spatially varying reflectivity are included in the optimization, higher Strehl ratios can be achieved. Following the works of Maréchal and Mahajan, optimization of the Strehl ratio (for peak intensity with a coherently illuminated system) occurs when the expectation value of the phase error's variance is minimized. We describe an optimization procedure based on regression analysis that incorporates these physical parameters. This approach is suitable for coherently illuminated systems of nearly diffraction-limited quality. Mathematically, this work is an enhancement of the methods commonly applied for ex situ alignment based on uniform weighting of all points on the surface (or a sub-region of the surface). It follows a similar approach to the optimization of apodized and non-uniformly illuminated optical systems. Significantly, it reaches a different conclusion than a more recent approach based on minimization of focal plane ray errors. PMID:27250372

  5. The 13 errors.

    PubMed

    Flower, J

    1998-01-01

    The reality is that most change efforts fail. McKinsey & Company carried out a fascinating research project on change to "crack the code" on creating and managing change in large organizations. One of the questions they asked--and answered--is why most organizations fail in their efforts to manage change. They found that 80 percent of these failures could be traced to 13 common errors. They are: (1) No winning strategy; (2) failure to make a compelling and urgent case for change; (3) failure to distinguish between decision-driven and behavior-dependent change; (4) over-reliance on structure and systems to change behavior; (5) lack of skills and resources; (6) failure to experiment; (7) leaders' inability or unwillingness to confront how they and their roles must change; (8) failure to mobilize and engage pivotal groups; (9) failure to understand and shape the informal organization; (10) inability to integrate and align all the initiatives; (11) no performance focus; (12) excessively open-ended process; and (13) failure to make the whole process transparent and meaningful to individuals. PMID:10351717

  6. Automatic alignment of double optical paths in excimer laser amplifier

    NASA Astrophysics Data System (ADS)

    Wang, Dahui; Zhao, Xueqing; Hua, Hengqi; Zhang, Yongsheng; Hu, Yun; Yi, Aiping; Zhao, Jun

    2013-05-01

    A kind of beam automatic alignment method used for double paths amplification in the electron pumped excimer laser system is demonstrated. In this way, the beams from the amplifiers can be transferred along the designated direction and accordingly irradiate on the target with high stabilization and accuracy. However, owing to nonexistence of natural alignment references in excimer laser amplifiers, two cross-hairs structure is used to align the beams. Here, one crosshair put into the input beam is regarded as the near-field reference while the other put into output beam is regarded as the far-field reference. The two cross-hairs are transmitted onto Charge Coupled Devices (CCD) by image-relaying structures separately. The errors between intersection points of two cross-talk images and centroid coordinates of actual beam are recorded automatically and sent to closed loop feedback control mechanism. Negative feedback keeps running until preset accuracy is reached. On the basis of above-mentioned design, the alignment optical path is built and the software is compiled, whereafter the experiment of double paths automatic alignment in electron pumped excimer laser amplifier is carried through. Meanwhile, the related influencing factors and the alignment precision are analyzed. Experimental results indicate that the alignment system can achieve the aiming direction of automatic aligning beams in short time. The analysis shows that the accuracy of alignment system is 0.63μrad and the beam maximum restoration error is 13.75μm. Furthermore, the bigger distance between the two cross-hairs, the higher precision of the system is. Therefore, the automatic alignment system has been used in angular multiplexing excimer Main Oscillation Power Amplification (MOPA) system and can satisfy the requirement of beam alignment precision on the whole.

  7. Sun compass error model

    NASA Technical Reports Server (NTRS)

    Blucker, T. J.; Ferry, W. W.

    1971-01-01

    An error model is described for the Apollo 15 sun compass, a contingency navigational device. Field test data are presented along with significant results of the test. The errors reported include a random error resulting from tilt in leveling the sun compass, a random error because of observer sighting inaccuracies, a bias error because of mean tilt in compass leveling, a bias error in the sun compass itself, and a bias error because the device is leveled to the local terrain slope.

  8. Controlling the alignment of liquid crystals by nanoparticle-doped and UV-treated polyimide alignment films

    NASA Astrophysics Data System (ADS)

    Jeng, Shie-Chang; Hwang, Su-June; Chen, Tai-An; Liu, Han-Shiang; Chen, Mu-Zhe

    2012-03-01

    We have developed two approaches for controlling the pretilt angles of liquid crystal molecules by using conventional polyimide (PI) alignment materials either doping homogeneous PIs with Polyhedral Oligomeric Silsequioxanes (POSS) nanoparticles or treating homeotropic PIs with ultraviolet light. These techniques are very simple and are compatible with current methods familiar in the LCD industry. The characteristics of modified PI alignment films and their applications for photonic devices are demonstrated in this paper.

  9. Ambient and Cryogenic Alignment Verification and Performance of the Infrared Multi-Object Spectrometer

    NASA Technical Reports Server (NTRS)

    Connelly, Joseph A.; Ohl, Raymond G.; Mink, Ronald G.; Mentzell, J. Eric; Saha, Timo T.; Tveekrem, June L.; Hylan, Jason E.; Sparr, Leroy M.; Chambers, V. John; Hagopian, John G.

    2003-01-01

    The Infrared Multi-Object Spectrometer (IRMOS) is a facility instrument for the Kitt Peak National Observatory 4 and 2.1 meter telescopes. IRMOS is a near-IR (0.8 - 2.5 micron) spectrometer with low- to mid-resolving power (R = 300 - 3000). IRMOS produces simultaneous spectra of approximately 100 objects in its 2.8 x 2.0 arc-min field of view using a commercial Micro Electro-Mechanical Systems (MEMS) Digital Micro-mirror Device (DMD) from Texas Instruments. The IRMOS optical design consists of two imaging subsystems. The focal reducer images the focal plane of the telescope onto the DMD field stop, and the spectrograph images the DMD onto the detector. We describe ambient breadboard subsystem alignment and imaging performance of each stage independently, and the ambient and cryogenic imaging performance of the fully assembled instrument. Interferometric measurements of subsystem wavefront error serve to venfy alignment, and are accomplished using a commercial, modified Twyman-Green laser unequal path interferometer. Image testing provides further verification of the optomechanical alignment method and a measurement of near-angle scattered light due to mirror small-scale surface error. Image testing is performed at multiple field points. A mercury-argon pencil lamp provides spectral lines at 546.1 nm and 1550 nm, and a CCD camera and IR camera are used as detectors. We use commercial optical modeling software to predict the point-spread function and its effect on instrument slit transmission and resolution. Our breadboard test results validate this prediction. We conclude with an instrument performance prediction for first light.

  10. Beam-pointing errors of planar-phased arrays.

    NASA Technical Reports Server (NTRS)

    Carver, K. R.; Cooper, W. K.; Stutzman, W. L.

    1973-01-01

    Using both analytical and Monte Carlo techniques, beam-pointing errors of planar-phased arrays are analyzed. The obtained simple formulas for rms pointing errors are applicable to uniform planar arrays with both uniform and Gaussian uncorrelated phase-error distributions and for any arbitrary scan angle.

  11. Lithography with infrared illumination alignment for advanced BiCMOS backside processing

    NASA Astrophysics Data System (ADS)

    Kulse, P.; Schulz, K.; Behrendt, U.; Wietstruck, M.; Kaynak, M.; Marschmeyer, S.; Tillack, B.

    2014-10-01

    Driven by new applications such as BiCMOS embedded RF-MEMS, high-Q passives, Si-based microfluidics for bio sensing and InP-Si BiCMOS heterointegration [1-4], accurate alignment between back and front side is highly desired. In this paper, we present an advanced back to front side alignment technique and implementation of it into the back side processing module of IHP's 0.25/0.13 μm high performance SiGe:C BiCMOS technology. Using the Nikon i-line Stepper NSR-SF150, a new infrared alignment system has been introduced. The developed technique enables a high resolution and accurate lithography on the back side of the BiCMOS-processed Si wafers for additional backside processing, such as backside routing metallization. In comparison to previous work [5] with overlay values of 500 nm and the requirement of two-step lithography, the new approach provides significant improvement in the overlay accuracy with overlay values of 200 nm and a significant increase of the fabrication throughput by eliminating the need of the two-step lithography. The new non-contact alignment procedure allows a direct back to front side alignment using any front side alignment mark (Fig. 2), which generated a signal by reflecting the IR light beam. Followed by a measurement of the misalignment between both front to back side overlay marks (Fig. 3) using EVG®NT40 automated measurement system, a final lithography process with wafer interfield corrections is applied to obtain a minimum overlay of 200 nm. For the specific application of deep Si etching using Bosch process, the etch profile angle deviation across the wafer (tilting) has to be considered as well. From experimental data, an etch profile angle deviation of 8 μm across the wafer has been measured (Fig. 7). The overlay error caused by tilting was corrected by optimization and adjustment of the stepper offset parameters. All measurements of back to front side misalignment were performed with the EVG®40NT automated measurement system

  12. Tilted Liquid Crystal Alignment on Asymmetrically Grooved Porous Alumina Film

    NASA Astrophysics Data System (ADS)

    Maeda, Tsuyoshi; Hiroshima, Kohki

    2005-06-01

    This paper reports the achievement of tilted liquid crystal (LC) alignment on an anodic porous alumina (APA) film using microgrooves with asymmetric shapes and dozens of minute pores. The microgrooves with asymmetric shapes were formed by a rubbing technique. The minute pores were then produced by anodization. The LC pretilt angle was controlled by the shapes of the microgrooves and pores. The LC director was orientated in the same inclining direction as that of a rubbed polyimide (PI) film. The pretilt angle was in the range of 20 to 90°. This tilted LC alignment remains very stable against external forces such as thermal shock and intense light.

  13. Perception of Perspective Angles.

    PubMed

    Erkelens, Casper J

    2015-06-01

    We perceive perspective angles, that is, angles that have an orientation in depth, differently from what they are in physical space. Extreme examples are angles between rails of a railway line or between lane dividers of a long and straight road. In this study, subjects judged perspective angles between bars lying on the floor of the laboratory. Perspective angles were also estimated from pictures taken from the same point of view. Converging and diverging angles were judged to test three models of visual space. Four subjects evaluated the perspective angles by matching them to nonperspective angles, that is, angles between the legs of a compass oriented in the frontal plane. All subjects judged both converging and diverging angles larger than the physical angle and smaller than the angles in the proximal stimuli. A model of shallow visual space describes the results. According to the model, lines parallel to visual lines, vanishing at infinity in physical space, converge to visual lines in visual space. The perceived shape of perspective angles is incompatible with the perceived length and width of the bars. The results have significance for models of visual perception and practical implications for driving and flying in poor visibility conditions. PMID:27433312

  14. Perception of Perspective Angles

    PubMed Central

    2015-01-01

    We perceive perspective angles, that is, angles that have an orientation in depth, differently from what they are in physical space. Extreme examples are angles between rails of a railway line or between lane dividers of a long and straight road. In this study, subjects judged perspective angles between bars lying on the floor of the laboratory. Perspective angles were also estimated from pictures taken from the same point of view. Converging and diverging angles were judged to test three models of visual space. Four subjects evaluated the perspective angles by matching them to nonperspective angles, that is, angles between the legs of a compass oriented in the frontal plane. All subjects judged both converging and diverging angles larger than the physical angle and smaller than the angles in the proximal stimuli. A model of shallow visual space describes the results. According to the model, lines parallel to visual lines, vanishing at infinity in physical space, converge to visual lines in visual space. The perceived shape of perspective angles is incompatible with the perceived length and width of the bars. The results have significance for models of visual perception and practical implications for driving and flying in poor visibility conditions. PMID:27433312

  15. Low angle resistivity anomaly in layered superconductors

    SciTech Connect

    Koshelev, A.E. |; Vinokur, V.M.

    1993-01-01

    The pinning effect of vortex lines by the layered structure (intrinsic pinning) on resistivity of high-T{sub c}, superconductors in the mixed state is investigated by means of perturbation theory. A sharp drop in the resistivity at small angles for which vortex lines are almost aligned with the ab-planes is shown to occur even in a high-temperature region where the pinning potential is reduced by thermal fluctuations.

  16. OBSERVATIONS OF ENHANCED RADIATIVE GRAIN ALIGNMENT NEAR HD 97300

    SciTech Connect

    Andersson, B-G; Potter, S. B. E-mail: sbp@saao.ac.z

    2010-09-10

    We have obtained optical multi-band polarimetry toward sightlines through the Chamaeleon I cloud, particularly in the vicinity of the young B9/A0 star HD 97300. We show, in agreement with earlier studies, that the radiation field impinging on the cloud in the projected vicinity of the star is dominated by the flux from the star, as evidenced by a local enhancement in the grain heating. By comparing the differential grain heating with the differential change in the location of the peak of the polarization curve, we show that the grain alignment is enhanced by the increase in the radiation field. We also find a weak, but measurable, variation in the grain alignment with the relative angle between the radiation field anisotropy and the magnetic field direction. Such an anisotropy in the grain alignment is consistent with a unique prediction of modern radiative alignment torque theory and provides direct support for radiatively driven grain alignment.

  17. Block Copolymer Nanocomposites in Electric Fields: Kinetics of Alignment

    SciTech Connect

    Liedel, Clemens; Pester, Christian; Ruppel, Markus A; Lewin, Christian; Pavan, Mariela J.; Urban, Volker S; Shenhar, Roy; Bosecke, Peter; Boker, Alexander

    2013-01-01

    We investigate the kinetics of block copolymer/nanoparticle composite alignment in an electric field using in situ transmission small-angle X-ray scattering. As a model system, we employ a lamellae forming polystyrene-block-poly(2-vinyl pyridine) block copolymer with different contents of gold nanoparticles in thick films under solvent vapor annealing. While the alignment improves with increasing nanoparticle fraction, the kinetics slows down. This is explained by changes in the degree of phase separation and viscosity. Our findings provide extended insights into the basics of nanocomposite alignment.

  18. Cooperative liquid-crystal alignment generated by overlaid topography

    NASA Astrophysics Data System (ADS)

    Yi, Youngwoo; Maclennan, Joseph E.; Clark, Noel A.

    2011-05-01

    Nematic and smectic liquid crystals were introduced into μm-scale gaps between plates coated with polymer films nanoimprinted with parallel arrays of rectangular channels. Overlaying the channels on the two plates close enough at a slight angle produces a mosaic of alternating planar and homeotropic alignments and hybrid alignment, showing that complex liquid-crystal orientation patterns can be achieved by combining two simple topographic patterns. These alignment patterns are attributed to spatial variation of surface roughness and 3D topographic structure created by a sufficient proximity of the two patterns.

  19. Cooperative liquid-crystal alignment generated by overlaid topography.

    PubMed

    Yi, Youngwoo; Maclennan, Joseph E; Clark, Noel A

    2011-05-01

    Nematic and smectic liquid crystals were introduced into μm-scale gaps between plates coated with polymer films nanoimprinted with parallel arrays of rectangular channels. Overlaying the channels on the two plates close enough at a slight angle produces a mosaic of alternating planar and homeotropic alignments and hybrid alignment, showing that complex liquid-crystal orientation patterns can be achieved by combining two simple topographic patterns. These alignment patterns are attributed to spatial variation of surface roughness and 3D topographic structure created by a sufficient proximity of the two patterns. PMID:21728557

  20. Mechanism of homeotropic alignment of ferroelectric liquid crystals doped with ferro-fluid and applications

    NASA Astrophysics Data System (ADS)

    Joshi, Tilak; Singh, Shri; Choudhary, Amit; Pant, R. P.; Biradar, A. M.

    2013-07-01

    We report homeotropic (HT) alignment of ferroelectric liquid crystal (FLC) doped with various concentrations of ferro-fluid (FF) without using any type of alignment layer. The FF induced HT alignment of FLC was found to be dependent on the doping concentration as revealed by optical micrographs, contact angle, and dielectric spectroscopy studies. Higher water contact angle of FF doped FLC films with respect to pure FLC film suggests higher surface energy of FF doped FLC than the surface energy of substrate. The physico-chemical mechanism together with steric model successfully explains the HT alignment of the studied FLC on the ITO substrate.

  1. FMIT alignment cart

    SciTech Connect

    Potter, R.C.; Dauelsberg, L.B.; Clark, D.C.; Grieggs, R.J.

    1981-01-01

    The Fusion Materials Irradiation Test (FMIT) Facility alignment cart must perform several functions. It must serve as a fixture to receive the drift-tube girder assembly when it is removed from the linac tank. It must transport the girder assembly from the linac vault to the area where alignment or disassembly is to take place. It must serve as a disassembly fixture to hold the girder while individual drift tubes are removed for repair. It must align the drift tube bores in a straight line parallel to the girder, using an optical system. These functions must be performed without violating any clearances found within the building. The bore tubes of the drift tubes will be irradiated, and shielding will be included in the system for easier maintenance.

  2. Barrel alignment fixture

    NASA Astrophysics Data System (ADS)

    Sheeley, J. D.

    1981-04-01

    Fabrication of slapper type detonator cables requires bonding of a thin barrel over a bridge. Location of the barrel hole with respect to the bridge is critical: the barrel hole must be centered over the bridge uniform spacing on each side. An alignment fixture which permits rapid adjustment of the barrel position with respect to the bridge is described. The barrel is manipulated by pincer-type fingers which are mounted on a small x-y table equipped with micrometer adjustments. Barrel positioning, performed under a binocular microscopy, is rapid and accurate. After alignment, the microscope is moved out of position and an infrared (IR) heat source is aimed at the barrel. A 5-second pulse of infrared heat flows the adhesive under the barrel and bonds it to the cable. Sapphire and Fotoform glass barrels were bonded successfully with the alignment fixture.

  3. Optics Alignment Panel

    NASA Technical Reports Server (NTRS)

    Schroeder, Daniel J.

    1992-01-01

    The Optics Alignment Panel (OAP) was commissioned by the HST Science Working Group to determine the optimum alignment of the OTA optics. The goal was to find the position of the secondary mirror (SM) for which there is no coma or astigmatism in the camera images due to misaligned optics, either tilt or decenter. The despace position was reviewed of the SM and the optimum focus was sought. The results of these efforts are as follows: (1) the best estimate of the aligned position of the SM in the notation of HDOS is (DZ,DY,TZ,TY) = (+248 microns, +8 microns, +53 arcsec, -79 arcsec), and (2) the best focus, defined to be that despace which maximizes the fractional energy at 486 nm in a 0.1 arcsec radius of a stellar image, is 12.2 mm beyond paraxial focus. The data leading to these conclusions, and the estimated uncertainties in the final results, are presented.

  4. MUSE optical alignment procedure

    NASA Astrophysics Data System (ADS)

    Laurent, Florence; Renault, Edgard; Loupias, Magali; Kosmalski, Johan; Anwand, Heiko; Bacon, Roland; Boudon, Didier; Caillier, Patrick; Daguisé, Eric; Dubois, Jean-Pierre; Dupuy, Christophe; Kelz, Andreas; Lizon, Jean-Louis; Nicklas, Harald; Parès, Laurent; Remillieux, Alban; Seifert, Walter; Valentin, Hervé; Xu, Wenli

    2012-09-01

    MUSE (Multi Unit Spectroscopic Explorer) is a second generation VLT integral field spectrograph (1x1arcmin² Field of View) developed for the European Southern Observatory (ESO), operating in the visible wavelength range (0.465-0.93 μm). A consortium of seven institutes is currently assembling and testing MUSE in the Integration Hall of the Observatoire de Lyon for the Preliminary Acceptance in Europe, scheduled for 2013. MUSE is composed of several subsystems which are under the responsibility of each institute. The Fore Optics derotates and anamorphoses the image at the focal plane. A Splitting and Relay Optics feed the 24 identical Integral Field Units (IFU), that are mounted within a large monolithic instrument mechanical structure. Each IFU incorporates an image slicer, a fully refractive spectrograph with VPH-grating and a detector system connected to a global vacuum and cryogenic system. During 2011, all MUSE subsystems were integrated, aligned and tested independently in each institute. After validations, the systems were shipped to the P.I. institute at Lyon and were assembled in the Integration Hall This paper describes the end-to-end optical alignment procedure of the MUSE instrument. The design strategy, mixing an optical alignment by manufacturing (plug and play approach) and few adjustments on key components, is presented. We depict the alignment method for identifying the optical axis using several references located in pupil and image planes. All tools required to perform the global alignment between each subsystem are described. The success of this alignment approach is demonstrated by the good results for the MUSE image quality. MUSE commissioning at the VLT (Very Large Telescope) is planned for 2013.

  5. Design of an all-attitude flight control system to execute commanded bank angles and angles of attack

    NASA Technical Reports Server (NTRS)

    Burgin, G. H.; Eggleston, D. M.

    1976-01-01

    A flight control system for use in air-to-air combat simulation was designed. The input to the flight control system are commanded bank angle and angle of attack, the output are commands to the control surface actuators such that the commanded values will be achieved in near minimum time and sideslip is controlled to remain small. For the longitudinal direction, a conventional linear control system with gains scheduled as a function of dynamic pressure is employed. For the lateral direction, a novel control system, consisting of a linear portion for small bank angle errors and a bang-bang control system for large errors and error rates is employed.

  6. Orientation and Alignment Echoes

    NASA Astrophysics Data System (ADS)

    Karras, G.; Hertz, E.; Billard, F.; Lavorel, B.; Hartmann, J.-M.; Faucher, O.; Gershnabel, Erez; Prior, Yehiam; Averbukh, Ilya Sh.

    2015-04-01

    We present one of the simplest classical systems featuring the echo phenomenon—a collection of randomly oriented free rotors with dispersed rotational velocities. Following excitation by a pair of time-delayed impulsive kicks, the mean orientation or alignment of the ensemble exhibits multiple echoes and fractional echoes. We elucidate the mechanism of the echo formation by the kick-induced filamentation of phase space, and provide the first experimental demonstration of classical alignment echoes in a thermal gas of CO2 molecules excited by a pair of femtosecond laser pulses.

  7. Segment alignment control system

    NASA Technical Reports Server (NTRS)

    Aubrun, JEAN-N.; Lorell, Ken R.

    1988-01-01

    The segmented primary mirror for the LDR will require a special segment alignment control system to precisely control the orientation of each of the segments so that the resulting composite reflector behaves like a monolith. The W.M. Keck Ten Meter Telescope will utilize a primary mirror made up of 36 actively controlled segments. Thus the primary mirror and its segment alignment control system are directly analogous to the LDR. The problems of controlling the segments in the face of disturbances and control/structures interaction, as analyzed for the TMT, are virtually identical to those for the LDR. The two systems are briefly compared.

  8. Reconstruction of an astigmatic hard X-ray beam and alignment of K-B mirrors from ptychographic coherent diffraction data.

    PubMed

    Kewish, Cameron M; Guizar-Sicairos, Manuel; Liu, Chian; Qian, Jun; Shi, Bing; Benson, Christa; Khounsary, Ali M; Vila-Comamala, Joan; Bunk, Oliver; Fienup, James R; Macrander, Albert T; Assoufid, Lahsen

    2010-10-25

    We have used coherent X-ray diffraction experiments to characterize both the 1-D and 2-D foci produced by nanofocusing Kirkpatrick-Baez (K-B) mirrors, and we find agreement. Algorithms related to ptychography were used to obtain a 3-D reconstruction of a focused hard X-ray beam waist, using data measured when the mirrors were not optimally aligned. Considerable astigmatism was evident in the reconstructed complex wavefield. Comparing the reconstructed wavefield for a single mirror with a geometrical projection of the wavefront errors expected from optical metrology data allowed us to diagnose a 40 μrad misalignment in the incident angle of the first mirror, which had occurred during the experiment. Good agreement between the reconstructed wavefront obtained from the X-ray data and off-line metrology data obtained with visible light demonstrates the usefulness of the technique as a metrology and alignment tool for nanofocusing X-ray optics. PMID:21164684

  9. Automation of the targeting and reflective alignment concept

    NASA Technical Reports Server (NTRS)

    Redfield, Robin C.

    1992-01-01

    The automated alignment system, described herein, employs a reflective, passive (requiring no power) target and includes a PC-based imaging system and one camera mounted on a six degree of freedom robot manipulator. The system detects and corrects for manipulator misalignment in three translational and three rotational directions by employing the Targeting and Reflective Alignment Concept (TRAC), which simplifies alignment by decoupling translational and rotational alignment control. The concept uses information on the camera and the target's relative position based on video feedback from the camera. These relative positions are converted into alignment errors and minimized by motions of the robot. The system is robust to exogenous lighting by virtue of a subtraction algorithm which enables the camera to only see the target. These capabilities are realized with relatively minimal complexity and expense.

  10. Absorber Alignment Measurement Tool for Solar Parabolic Trough Collectors: Preprint

    SciTech Connect

    Stynes, J. K.; Ihas, B.

    2012-04-01

    As we pursue efforts to lower the capital and installation costs of parabolic trough solar collectors, it is essential to maintain high optical performance. While there are many optical tools available to measure the reflector slope errors of parabolic trough solar collectors, there are few tools to measure the absorber alignment. A new method is presented here to measure the absorber alignment in two dimensions to within 0.5 cm. The absorber alignment is measured using a digital camera and four photogrammetric targets. Physical contact with the receiver absorber or glass is not necessary. The alignment of the absorber is measured along its full length so that sagging of the absorber can be quantified with this technique. The resulting absorber alignment measurement provides critical information required to accurately determine the intercept factor of a collector.

  11. Robust optical alignment systems using geometric invariants

    NASA Astrophysics Data System (ADS)

    Ho, Tzung-Hsien; Rzasa, John; Milner, Stuart D.; Davis, Christopher C.

    2007-09-01

    Traditional coarse pointing, acquisition, and tracking (CPAT) systems are pre-calibrated to have the center pixel of the camera aligned to the laser pointing vector and the center pixel is manually moved to the target of interest to complete the alignment process. Such a system has previously demonstrated its capability in aligning with distant targets and the pointing accuracy is on the order of sensor resolution. However, aligning with targets at medium range where the distance between angular sensor and transceiver is not negligible is its Achilles Heel. This limitation can be resolved by imposing constraints, such as the trifocal tensor (TT), which is deduced from the geometrical dependence between cameras and transceivers. Two autonomous CPAT systems are introduced for FSO transceiver alignment in mid- and long-range scenarios. This work focuses on experimental results that validate the pointing performance for targets at different distances, backed up by the theoretical derivations. A mid-range CPAT system, applying a trifocal tensor as its geometric invariant, includes two perspective cameras as sensors to perceive target distances. The long-range CPAT system, applying linear mapping as the invariant, requires only one camera to determine the pointing angle. Calibration procedures for both systems are robust to measurement noise and the resulting system can autonomously point to a target of interest with a high accuracy, which is also on the order of sensor resolution. The results of this work are not only beneficial to the design of CPAT systems for FSO transceiver alignment, but also in new applications such as surveillance and navigation.

  12. Circuitry for Angle Measurements

    NASA Technical Reports Server (NTRS)

    Currie, J. R.; Kissel, R. R.

    1983-01-01

    Angle resolver pulsed and read under microprocessor control. Pulse generator excites resolver windings with dual slope pulse. System sequentially reads sine and cosine windings. Microprocessor determines angle through which resolver shaft turned from reference angle. Suitable applications include rate tables, antenna direction controllers, and machine tools.

  13. Remediating Common Math Errors.

    ERIC Educational Resources Information Center

    Wagner, Rudolph F.

    1981-01-01

    Explanations and remediation suggestions for five types of mathematics errors due either to perceptual or cognitive difficulties are given. Error types include directionality problems, mirror writing, visually misperceived signs, diagnosed directionality problems, and mixed process errors. (CL)

  14. Implant alignment in total elbow arthroplasty: conventional vs. navigated techniques

    NASA Astrophysics Data System (ADS)

    McDonald, Colin P.; Johnson, James A.; King, Graham J. W.; Peters, Terry M.

    2009-02-01

    Incorrect selection of the native flexion-extension axis during implant alignment in elbow replacement surgery is likely a significant contributor to failure of the prosthesis. Computer and image-assisted surgery is emerging as a useful surgical tool in terms of improving the accuracy of orthopaedic procedures. This study evaluated the accuracy of implant alignment using an image-based navigation technique compared against a conventional non-navigated approach. Implant alignment error was 0.8 +/- 0.3 mm in translation and 1.1 +/- 0.4° in rotation for the navigated alignment, compared with 3.1 +/- 1.3 mm and 5.0 +/- 3.8° for the non-navigated alignment. Five (5) of the 11 non-navigated alignments were malaligned greater than 5° while none of the navigated alignments were placed with an error of greater than 2.0°. It is likely that improved implant positioning will lead to reduced implant loading and wear, resulting in fewer implantrelated complications and revision surgeries.

  15. Vertical Alignment and Collaboration.

    ERIC Educational Resources Information Center

    Bergman, Donna; Calzada, Lucio; LaPointe, Nancy; Lee, Audra; Sullivan, Lynn

    This study investigated whether vertical (grade level sequence) alignment of the curriculum in conjunction with teacher collaboration would enhance student performance on the Texas Assessment of Academic Skills (TAAS) test in south Texas school districts of various sizes. Surveys were mailed to the office of the superintendent of 47 school…

  16. Curriculum Alignment: Establishing Coherence

    ERIC Educational Resources Information Center

    Gagné, Philippe; Dumont, Laurence; Brunet, Sabine; Boucher, Geneviève

    2013-01-01

    In this paper, we present a step-by-step guide to implement a curricular alignment project, directed at professional development and student support, and developed in a higher education French as a second language department. We outline best practices and preliminary results from our experience and provide ways to adapt our experience to other…

  17. Aligning brains and minds

    PubMed Central

    Tong, Frank

    2012-01-01

    In this issue of Neuron, Haxby and colleagues describe a new method for aligning functional brain activity patterns across participants. Their study demonstrates that objects are similarly represented across different brains, allowing for reliable classification of one person’s brain activity based on another’s. PMID:22017984

  18. Aligned-or Not?

    ERIC Educational Resources Information Center

    Roseman, Jo Ellen; Koppal, Mary

    2015-01-01

    When state leaders and national partners in the development of the Next Generation Science Standards met to consider implementation strategies, states and school districts wanted to know which materials were aligned to the new standards. The answer from the developers was short but not sweet: You won't find much now, and it's going to…

  19. Optically Aligned Drill Press

    NASA Technical Reports Server (NTRS)

    Adderholdt, Bruce M.

    1994-01-01

    Precise drill press equipped with rotary-indexing microscope. Microscope and drill exchange places when turret rotated. Microscope axis first aligned over future hole, then rotated out of way so drill axis assumes its precise position. New procedure takes less time to locate drilling positions and produces more accurate results. Apparatus adapted to such other machine tools as milling and measuring machines.

  20. Solar cell angle of incidence corrections

    NASA Technical Reports Server (NTRS)

    Burger, Dale R.; Mueller, Robert L.

    1995-01-01

    Literature on solar array angle of incidence corrections was found to be sparse and contained no tabular data for support. This lack along with recent data on 27 GaAs/Ge 4 cm by 4 cm cells initiated the analysis presented in this paper. The literature cites seven possible contributors to angle of incidence effects: cosine, optical front surface, edge, shadowing, UV degradation, particulate soiling, and background color. Only the first three are covered in this paper due to lack of sufficient data. The cosine correction is commonly used but is not sufficient when the incident angle is large. Fresnel reflection calculations require knowledge of the index of refraction of the coverglass front surface. The absolute index of refraction for the coverglass front surface was not known nor was it measured due to lack of funds. However, a value for the index of refraction was obtained by examining how the prediction errors varied with different assumed indices and selecting the best fit to the set of measured values. Corrections using front surface Fresnel reflection along with the cosine correction give very good predictive results when compared to measured data, except there is a definite trend away from predicted values at the larger incident angles. This trend could be related to edge effects and is illustrated by a use of a box plot of the errors and by plotting the deviation of the mean against incidence angle. The trend is for larger deviations at larger incidence angles and there may be a fourth order effect involved in the trend. A chi-squared test was used to determine if the measurement errors were normally distributed. At 10 degrees the chi-squared test failed, probably due to the very small numbers involved or a bias from the measurement procedure. All other angles showed a good fit to the normal distribution with increasing goodness-of-fit as the angles increased which reinforces the very small numbers hypothesis. The contributed data only went to 65 degrees

  1. High precision beam alignment of electromagnetic wigglers

    SciTech Connect

    Ben-Zvi, I.; Qiu, X.Z.

    1993-01-01

    The performance of Free-Electron Lasers depends critically on the quality of the alignment of the electron beam to the wiggler's magnetic axis and the deviation of this axis from a straight fine. The measurement of the electron beam position requires numerous beam position monitors in the wiggler, where space is at premium. The beam position measurement is used to set beam steerers for an orbit correction in the wiggler. The authors propose an alternative high precision alignment method in which one or two external Beam Position Monitors (BPM) are used. In this technique, the field in the electro-wiggler is modulated section by section and the beam position movement at the external BPM is detected in synchronism with the modulation. A beam offset at the modulated beam section will produce a modulation of the beam position at the detector that is a function of the of the beam offset and the absolute value of the modulation current. The wiggler errors produce a modulation that is a function of the modulation current. It will be shown that this method allows the detection and correction of the beam position at each section in the presence of wiggler errors with a good resolution. Furthermore, it allows one to measure the first and second integrals of the wiggler error over each wiggler section. Lastly, provided that wiggler sections can be degaussed effectively, one can test the deviation of the wiggler's magnetic axis from a straight line.

  2. Instability of Ocular Alignment in Childhood Esotropia

    PubMed Central

    2008-01-01

    Objective Instability of ocular alignment may cause surgeons to delay surgical correction of childhood esotropia. We investigated the stability of ocular alignment over 18 weeks in children with infantile esotropia (IET), acquired non-accommodative esotropia (ANAET), or acquired partially-accommodative esotropia (APAET). Design Prospective observational study Participants Two hundred thirty-three children aged 2 months to <5 years with IET, ANAET, or APAET of less than 6 months duration Methods Ocular alignment was measured at baseline and at six-week intervals for 18 weeks. Main Outcome Measure Using definitions derived from a nested test-retest study and computer simulation modeling, ocular alignment was classified as ‘unstable’ if there was a change of ≥ 15 prism diopters (PD) between any two of the four measurements, as ‘stable’ if all four measurements were within ≤ 5 PD of one another, or as ‘uncertain’ if neither criteria was met. Results Of those who completed all three follow-up visits within time windows for analysis, 27 (46%) of 59 subjects with IET had ocular alignment classified as unstable (95% confidence interval (CI) = 33 to 59%), 20% as stable (95% CI = 11 to 33%), and 34% as uncertain (95% CI = 22 to 47%). Thirteen (22%) of 60 subjects with ANAET had ocular alignment classified as unstable (95% confidence interval (CI) = 12 to 34%), 37% as stable (95% CI = 25 to 50%), and 42% as uncertain (95% CI = 29 to 55%). Six (15%) of 41 subjects with APAET had ocular alignment classified as unstable (95% CI = 6 to 29%), 39% as stable (95% CI = 24 to 56%), and 46% as uncertain (95% CI = 31 to 63%). For IET, subjects who were older at presentation were less likely to have unstable angles than subjects who were younger at presentation (risk ratio for unstable vs. stable per additional month of age = 0.85, 99% CI = 0.74 to 0.99). Conclusions Ocular alignment instability is common in children with IET, ANAET and APAET. The impact of this finding

  3. MUSE alignment onto VLT

    NASA Astrophysics Data System (ADS)

    Laurent, Florence; Renault, Edgard; Boudon, Didier; Caillier, Patrick; Daguisé, Eric; Dupuy, Christophe; Jarno, Aurélien; Lizon, Jean-Louis; Migniau, Jean-Emmanuel; Nicklas, Harald; Piqueras, Laure

    2014-07-01

    MUSE (Multi Unit Spectroscopic Explorer) is a second generation Very Large Telescope (VLT) integral field spectrograph developed for the European Southern Observatory (ESO). It combines a 1' x 1' field of view sampled at 0.2 arcsec for its Wide Field Mode (WFM) and a 7.5"x7.5" field of view for its Narrow Field Mode (NFM). Both modes will operate with the improved spatial resolution provided by GALACSI (Ground Atmospheric Layer Adaptive Optics for Spectroscopic Imaging), that will use the VLT deformable secondary mirror and 4 Laser Guide Stars (LGS) foreseen in 2015. MUSE operates in the visible wavelength range (0.465-0.93 μm). A consortium of seven institutes is currently commissioning MUSE in the Very Large Telescope for the Preliminary Acceptance in Chile, scheduled for September, 2014. MUSE is composed of several subsystems which are under the responsibility of each institute. The Fore Optics derotates and anamorphoses the image at the focal plane. A Splitting and Relay Optics feed the 24 identical Integral Field Units (IFU), that are mounted within a large monolithic structure. Each IFU incorporates an image slicer, a fully refractive spectrograph with VPH-grating and a detector system connected to a global vacuum and cryogenic system. During 2012 and 2013, all MUSE subsystems were integrated, aligned and tested to the P.I. institute at Lyon. After successful PAE in September 2013, MUSE instrument was shipped to the Very Large Telescope in Chile where that was aligned and tested in ESO integration hall at Paranal. After, MUSE was directly transported, fully aligned and without any optomechanical dismounting, onto VLT telescope where the first light was overcame the 7th of February, 2014. This paper describes the alignment procedure of the whole MUSE instrument with respect to the Very Large Telescope (VLT). It describes how 6 tons could be move with accuracy better than 0.025mm and less than 0.25 arcmin in order to reach alignment requirements. The success

  4. Internal Alignment of the SLD Vertex Detector

    SciTech Connect

    Jackson, D.J.; Wickens, F.J.; Su, D.; /SLAC

    2007-12-03

    The tracking resolution and vertex finding capabilities of the SLD experiment depended upon a precise knowledge of the location and orientation of the elements of the SLD pixel vertex detector (VXD3) in 3D space. At the heart of the procedure described here to align the 96 CCDs is the matrix inversion technique of singular value decomposition (SVD). This tool was employed to unfold the detector geometry corrections from the track data in the VXD3. The algorithm was adapted to perform an optimal {chi}{sup 2} minimization by careful treatment of the track hit residual measurement errors. The tracking resolution obtained with the aligned geometry achieved the design performance. Comments are given on how this method could be used for other trackers.

  5. Nonlinearity Analysis and Parameters Optimization for an Inductive Angle Sensor

    PubMed Central

    Ye, Lin; Yang, Ming; Xu, Liang; Zhuang, Xiaoqi; Dong, Zhaopeng; Li, Shiyang

    2014-01-01

    Using the finite element method (FEM) and particle swarm optimization (PSO), a nonlinearity analysis based on parameter optimization is proposed to design an inductive angle sensor. Due to the structure complexity of the sensor, understanding the influences of structure parameters on the nonlinearity errors is a critical step in designing an effective sensor. Key parameters are selected for the design based on the parameters' effects on the nonlinearity errors. The finite element method and particle swarm optimization are combined for the sensor design to get the minimal nonlinearity error. In the simulation, the nonlinearity error of the optimized sensor is 0.053% in the angle range from −60° to 60°. A prototype sensor is manufactured and measured experimentally, and the experimental nonlinearity error is 0.081% in the angle range from −60° to 60°. PMID:24590353

  6. Implant Angle Monitor System of MC3-II

    SciTech Connect

    Sato, Fumiaki; Sano, Makoto; Nakaoka, Hiroaki; Fujii, Yoshito; Kudo, Tetuya; Nakanishi, Makoto; Koike, Masazumi; Fujino, Yasushi

    2008-11-03

    Precise implant angle control is required for the latest generation of ion implanters to meet further shrink semiconductor device requirements. Especially, the highest angle accuracy is required for Halo implant process of Logic devices. The Halo implant angle affects the device performance, because slight differences of beam divergence change the overlap profile towards the extension. Additionally, twist angle accuracy is demanded in case of channeling angle implant. Therefore monitoring beam angles and wafer twist angles is important. A new monitoring system for the MC3-II, SEN Corp.'s single wafer type medium current implanter has been developed. This paper describes the angle control performance and monitoring system of the MC3-II. For the twist angle control, we developed a wafer notch angle monitor. The system monitors the wafer notch image on the platen. And the notch angle variation is calculated by using image processing method. It is also able to adjust the notch angle according to the angle error. For the tilt angle control, we developed a vertical beam profile monitor. The monitor system can detect beam profile of vertical directions with horizontally scanning beam. It also measures beam angles of a tilt direction to a wafer. The system configuration and sample beam data are presented.

  7. Optical-precision alignment of diffraction grating mold in moire interferometry

    NASA Technical Reports Server (NTRS)

    Joh, D.

    1992-01-01

    A high-precision optical method is presented for aligning diffraction grating molds with the edges of specimens in moire interferometry. The alignment fixture is simple and convenient to operate. The conventional method of grating-mold alignment has a wide band of uncertainty in the range of error which is not compatible with the required precision of high-sensitivity moire interferometry. Following a description of the alignment technique, both the single-edge and parallel-edge guide bar optical alignment methods are introduced and compared.

  8. Development of a method of alignment between various SOLAR MAXIMUM MISSION experiments

    NASA Technical Reports Server (NTRS)

    1977-01-01

    Results of an engineering study of the methods of alignment between various experiments for the solar maximum mission are described. The configuration studied consists of the instruments, mounts and instrument support platform located within the experiment module. Hardware design, fabrication methods and alignment techniques were studied with regard to optimizing the coalignment between the experiments and the fine sun sensor. The proposed hardware design was reviewed with regard to loads, stress, thermal distortion, alignment error budgets, fabrication techniques, alignment techniques and producibility. Methods of achieving comparable alignment accuracies on previous projects were also reviewed.

  9. Antenna pointing systematic error model derivations

    NASA Technical Reports Server (NTRS)

    Guiar, C. N.; Lansing, F. L.; Riggs, R.

    1987-01-01

    The pointing model used to represent and correct systematic errors for the Deep Space Network (DSN) antennas is presented. Analytical expressions are given in both azimuth-elevation (az-el) and hour angle-declination (ha-dec) mounts for RF axis collimation error, encoder offset, nonorthogonality of axes, axis plane tilt, and structural flexure due to gravity loading. While the residual pointing errors (rms) after correction appear to be within the ten percent of the half-power beamwidth criterion commonly set for good pointing accuracy, the DSN has embarked on an extensive pointing improvement and modeling program aiming toward an order of magnitude higher pointing precision.

  10. Laser measurement and analysis of reposition error in polishing systems

    NASA Astrophysics Data System (ADS)

    Liu, Weisen; Wang, Junhua; Xu, Min; He, Xiaoying

    2015-10-01

    In this paper, robotic reposition error measurement method based on laser interference remote positioning is presented, the geometric error is analyzed in the polishing system based on robot and the mathematical model of the tilt error is presented. Studies show that less than 1 mm error is mainly caused by the tilt error with small incident angle. Marking spot position with interference fringe enhances greatly the error measurement precision, the measurement precision of tilt error can reach 5 um. Measurement results show that reposition error of the polishing system is mainly from the tilt error caused by the motor A, repositioning precision is greatly increased after polishing system improvement. The measurement method has important applications in the actual error measurement with low cost, simple operation.

  11. Inflation by alignment

    SciTech Connect

    Burgess, C.P.; Roest, Diederik

    2015-06-08

    Pseudo-Goldstone bosons (pGBs) can provide technically natural inflatons, as has been comparatively well-explored in the simplest axion examples. Although inflationary success requires trans-Planckian decay constants, f≳M{sub p}, several mechanisms have been proposed to obtain this, relying on (mis-)alignments between potential and kinetic energies in multiple-field models. We extend these mechanisms to a broader class of inflationary models, including in particular the exponential potentials that arise for pGB potentials based on noncompact groups (and so which might apply to moduli in an extra-dimensional setting). The resulting potentials provide natural large-field inflationary models and can predict a larger primordial tensor signal than is true for simpler single-field versions of these models. In so doing we provide a unified treatment of several alignment mechanisms, showing how each emerges as a limit of the more general setup.

  12. Alignments of RNA structures.

    PubMed

    Blin, Guillaume; Denise, Alain; Dulucq, Serge; Herrbach, Claire; Touzet, Hélène

    2010-01-01

    We describe a theoretical unifying framework to express the comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supersequences for arc-annotated sequences and encompasses the main existing models for RNA structure comparison based on trees and arc-annotated sequences with a variety of edit operations. It also gives rise to edit models that have not been studied yet. We provide a thorough analysis of the alignment hierarchy, including a new polynomial-time algorithm and an NP-completeness proof. The polynomial-time algorithm involves biologically relevant edit operations such as pairing or unpairing nucleotides. It has been implemented in a software, called gardenia, which is available at the Web server http://bioinfo.lifl.fr/RNA/gardenia. PMID:20431150

  13. Alignment reference device

    DOEpatents

    Patton, Gail Y.; Torgerson, Darrel D.

    1987-01-01

    An alignment reference device provides a collimated laser beam that minimizes angular deviations therein. A laser beam source outputs the beam into a single mode optical fiber. The output end of the optical fiber acts as a source of radiant energy and is positioned at the focal point of a lens system where the focal point is positioned within the lens. The output beam reflects off a mirror back to the lens that produces a collimated beam.

  14. Nuclear reactor alignment plate configuration

    DOEpatents

    Altman, David A; Forsyth, David R; Smith, Richard E; Singleton, Norman R

    2014-01-28

    An alignment plate that is attached to a core barrel of a pressurized water reactor and fits within slots within a top plate of a lower core shroud and upper core plate to maintain lateral alignment of the reactor internals. The alignment plate is connected to the core barrel through two vertically-spaced dowel pins that extend from the outside surface of the core barrel through a reinforcement pad and into corresponding holes in the alignment plate. Additionally, threaded fasteners are inserted around the perimeter of the reinforcement pad and into the alignment plate to further secure the alignment plate to the core barrel. A fillet weld also is deposited around the perimeter of the reinforcement pad. To accomodate thermal growth between the alignment plate and the core barrel, a gap is left above, below and at both sides of one of the dowel pins in the alignment plate holes through with the dowel pins pass.

  15. Relay telescope for high power laser alignment system

    DOEpatents

    Dane, C. Brent; Hackel, Lloyd; Harris, Fritz B.

    2006-09-19

    A laser system includes an optical path having an intracavity relay telescope with a telescope focal point for imaging an output of the gain medium between an image location at or near the gain medium and an image location at or near an output coupler for the laser system. A kinematic mount is provided within a vacuum chamber, and adapted to secure beam baffles near the telescope focal point. An access port on the vacuum chamber is adapted for allowing insertion and removal of the beam baffles. A first baffle formed using an alignment pinhole aperture is used during alignment of the laser system. A second tapered baffle replaces the alignment aperture during operation and acts as a far-field baffle in which off angle beams strike the baffle a grazing angle of incidence, reducing fluence levels at the impact areas.

  16. Backrest Shape Affects Head-Neck Alignment and Seated Pressure.

    PubMed

    Ukita, Atsuki; Nishimura, Shigeo; Kishigami, Hirotoshi; Hatta, Tatsuo

    2015-01-01

    Unstable back support against gravity results in a forward head posture and contributes to buttocks pressure ulcers. However, the association between these health problems and a wheelchair backrest is unclear. Our newly developed wheelchair (N-WC) supports the back of the pelvis and thorax from obliquely underneath. The purpose of this study was to investigate the effect of different backrest shapes on head-neck alignment and seated pressure. Data from 28 healthy subjects were analyzed. Outcome measures were head-neck alignment angles, support angles of the backrest, and pressure distributions on the supporting surfaces. Compared with a typical wheelchair that has a flat backrest, the seat pressure decreased and the center of pressure was located in the middle of both the seat and backrest in the N-WC. Moreover, the head-neck alignment when seated in the N-WC was upright. These results highlight the importance of the shape of the wheelchair backrest. PMID:26288886

  17. Dynamic Alignment at SLS

    SciTech Connect

    Ruland, Robert E.

    2003-04-23

    The relative alignment of components in the storage ring of the Swiss Light Source (SLS) is guaranteed by mechanical means. The magnets are rigidly fixed to 48 girders by means of alignment rails with tolerances of less than {+-}15 {micro}m. The bending magnets, supported by 3 point ball bearings, overlap adjacent girders and thus establish virtual train links between the girders, located near the bending magnet centres. Keeping the distortion of the storage ring geometry within a tolerance of {+-}100 {micro}m in order to guarantee sufficient dynamic apertures, requires continuous monitoring and correction of the girder locations. Two monitoring systems for the horizontal and the vertical direction will be installed to measure displacements of the train link between girders, which are due to ground settings and temperature effects: The hydrostatic levelling system (HLS) gives an absolute vertical reference, while the horizontal positioning system (HPS), which employs low cost linear encoders with sub-micron resolution, measures relative horizontal movements. The girder mover system based on five DC motors per girder allows a dynamic realignment of the storage ring within a working window of more than {+-}1 mm for girder translations and {+-}1 mrad for rotations. We will describe both monitoring systems (HLS and HPS) as well as the applied correction scheme based on the girder movers. We also show simulations indicating that beam based girder alignment takes care of most of the static closed orbit correction.

  18. Polar cap arcs: Sun-aligned or cusp-aligned?

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Paxton, L. J.; Zhang, Qinghe; Xing, Zanyang

    2016-08-01

    Polar cap arcs are often called sun-aligned arcs. Satellite observations reveal that polar cap arcs join together at the cusp and are actually cusp aligned. Strong ionospheric plasma velocity shears, thus field aligned currents, were associated with polar arcs and they were likely caused by Kelvin-Helmholtz waves around the low-latitude magnetopause under a northward IMF Bz. The magnetic field lines around the magnetopause join together in the cusp region so are the field aligned currents and particle precipitation. This explains why polar arcs are cusp aligned.

  19. Alignment and alignment transition of bent core nematics

    NASA Astrophysics Data System (ADS)

    Elamain, Omaima; Hegde, Gurumurthy; Komitov, Lachezar

    2013-07-01

    We report on the alignment of nematics consisting of bimesogen bent core molecules of chlorine substituent of benzene derivative and their binary mixture with rod like nematics. It was found that the alignment layer made from polyimide material, which is usually used for promoting vertical (homeotropic) alignment of rod like nematics, promotes instead a planar alignment of the bent core nematic and its nematic mixtures. At higher concentration of the rod like nematic component in these mixtures, a temperature driven transition from vertical to planar alignment was found near the transition to isotropic phase.

  20. Alignment as a Teacher Variable

    ERIC Educational Resources Information Center

    Porter, Andrew C.; Smithson, John; Blank, Rolf; Zeidner, Timothy

    2007-01-01

    With the exception of the procedures developed by Porter and colleagues (Porter, 2002), other methods of defining and measuring alignment are essentially limited to alignment between tests and standards. Porter's procedures have been generalized to investigating the alignment between content standards, tests, textbooks, and even classroom…

  1. Robust temporal alignment of multimodal cardiac sequences

    NASA Astrophysics Data System (ADS)

    Perissinotto, Andrea; Queirós, Sandro; Morais, Pedro; Baptista, Maria J.; Monaghan, Mark; Rodrigues, Nuno F.; D'hooge, Jan; Vilaça, João. L.; Barbosa, Daniel

    2015-03-01

    Given the dynamic nature of cardiac function, correct temporal alignment of pre-operative models and intraoperative images is crucial for augmented reality in cardiac image-guided interventions. As such, the current study focuses on the development of an image-based strategy for temporal alignment of multimodal cardiac imaging sequences, such as cine Magnetic Resonance Imaging (MRI) or 3D Ultrasound (US). First, we derive a robust, modality-independent signal from the image sequences, estimated by computing the normalized cross-correlation between each frame in the temporal sequence and the end-diastolic frame. This signal is a resembler for the left-ventricle (LV) volume curve over time, whose variation indicates different temporal landmarks of the cardiac cycle. We then perform the temporal alignment of these surrogate signals derived from MRI and US sequences of the same patient through Dynamic Time Warping (DTW), allowing to synchronize both sequences. The proposed framework was evaluated in 98 patients, which have undergone both 3D+t MRI and US scans. The end-systolic frame could be accurately estimated as the minimum of the image-derived surrogate signal, presenting a relative error of 1.6 +/- 1.9% and 4.0 +/- 4.2% for the MRI and US sequences, respectively, thus supporting its association with key temporal instants of the cardiac cycle. The use of DTW reduces the desynchronization of the cardiac events in MRI and US sequences, allowing to temporally align multimodal cardiac imaging sequences. Overall, a generic, fast and accurate method for temporal synchronization of MRI and US sequences of the same patient was introduced. This approach could be straightforwardly used for the correct temporal alignment of pre-operative MRI information and intra-operative US images.

  2. Multijoint error compensation mediates unstable object control.

    PubMed

    Cluff, Tyler; Manos, Aspasia; Lee, Timothy D; Balasubramaniam, Ramesh

    2012-08-01

    A key feature of skilled object control is the ability to correct performance errors. This process is not straightforward for unstable objects (e.g., inverted pendulum or "stick" balancing) because the mechanics of the object are sensitive to small control errors, which can lead to rapid performance changes. In this study, we have characterized joint recruitment and coordination processes in an unstable object control task. Our objective was to determine whether skill acquisition involves changes in the recruitment of individual joints or distributed error compensation. To address this problem, we monitored stick-balancing performance across four experimental sessions. We confirmed that subjects learned the task by showing an increase in the stability and length of balancing trials across training sessions. We demonstrated that motor learning led to the development of a multijoint error compensation strategy such that after training, subjects preferentially constrained joint angle variance that jeopardized task performance. The selective constraint of destabilizing joint angle variance was an important metric of motor learning. Finally, we performed a combined uncontrolled manifold-permutation analysis to ensure the variance structure was not confounded by differences in the variance of individual joint angles. We showed that reliance on multijoint error compensation increased, whereas individual joint variation (primarily at the wrist joint) decreased systematically with training. We propose a learning mechanism that is based on the accurate estimation of sensory states. PMID:22623491

  3. Error and adjustment of reflecting prisms

    NASA Astrophysics Data System (ADS)

    Mao, Wenwei

    1997-12-01

    A manufacturing error in the orientation of the working planes of a reflecting prism, such as an angle error or an edge error, will cause the optical axis to deviate and the image to lean. So does an adjustment (position error) of a reflecting prism. A universal method to be used to calculate the optical axis deviation and the image lean caused by the manufacturing error of a reflecting prism is presented. It is suited to all types of reflecting prisms. A means to offset the position error against the manufacturing error of a reflecting prism and the changes of image orientation is discussed. For the calculation to be feasible, a surface named the 'separating surface' is introduced just in front of the real exit face of a real prism. It is the image of the entrance face formed by all reflecting surfaces of the real prism. It can be used to separate the image orientation change caused by the error of the prism's reflecting surfaces from the image orientation change caused by the error of the prism's refracting surface. Based on ray tracing, a set of simple and explicit formulas of the optical axis deviation and the image lean for a general optical wedge is derived.

  4. Solar angle reference manual

    SciTech Connect

    Sibson, R.

    1983-01-01

    The introduction is the only text in the volume; the rest of the book contains easy-to-use graphical methods for building design and construction using solar energy. Isogonic charts and solar angle diagrams are included. Isogonic charts. Solar angle diagrams.

  5. Reading Angles in Maps

    ERIC Educational Resources Information Center

    Izard, Véronique; O'Donnell, Evan; Spelke, Elizabeth S.

    2014-01-01

    Preschool children can navigate by simple geometric maps of the environment, but the nature of the geometric relations they use in map reading remains unclear. Here, children were tested specifically on their sensitivity to angle. Forty-eight children (age 47:15-53:30 months) were presented with fragments of geometric maps, in which angle sections…

  6. Precomparator and postcomparator errors in monopulse.

    SciTech Connect

    Bickel, Douglas Lloyd

    2013-02-01

    Monopulse radar is a well-established technique for extracting accurate target location information in the presence of target scintillation. It relies on the comparison of at least two patterns being received simultaneously by the antenna. These two patterns are designed to differ in the direction in which we wish to obtain the target angle information. The two patterns are compared to each other through a standard method, typically by forming the ratio of the difference of the patterns to the sum of the patterns. The key to accurate angle information using monopulse is that the mapping function from the target angle to this ratio is well-behaved and well-known. Errors in the amplitude and phase of the signals prior and subsequent to the comparison operation affect the mapping function. The purpose of this report is to provide some intuition into these error effects upon the mapping function.

  7. Solar Alignments - Identification and Analysis

    NASA Astrophysics Data System (ADS)

    Belmonte, Juan Antonio

    The sun was such an important divinity in antiquity, and even today, that solar alignments should be expected within a large variety of places and cultures. These are probably the most conspicuous kind of astronomical alignments a field researcher can deal with. The need for a correct identification is thus evident. The different kind of solar phenomena susceptible of being determined by astronomical alignments will be scrutinized, following by the way in which such alignments can materialize in space. It will be shown that analyzing solar alignments is not always an easy task.

  8. Photometric theory for wide-angle phenomena

    NASA Technical Reports Server (NTRS)

    Usher, Peter D.

    1990-01-01

    An examination is made of the problem posed by wide-angle photographic photometry, in order to extract a photometric-morphological history of Comet P/Halley. Photometric solutions are presently achieved over wide angles through a generalization of an assumption-free moment-sum method. Standard stars in the field allow a complete solution to be obtained for extinction, sky brightness, and the characteristic curve. After formulating Newton's method for the solution of the general nonlinear least-square problem, an implementation is undertaken for a canonical data set. Attention is given to the problem of random and systematic photometric errors.

  9. Magnetic Alignment of Pulsed Solenoids Using the Pulsed Wire Method

    SciTech Connect

    Arbelaez, D.; Madur, A.; Lipton, T.M.; Waldron, W.L.; Kwan, J.W.

    2011-04-01

    A unique application of the pulsed-wire measurement method has been implemented for alignment of 2.5 T pulsed solenoid magnets. The magnetic axis measurement has been shown to have a resolution of better than 25 {micro}m. The accuracy of the technique allows for the identification of inherent field errors due to, for example, the winding layer transitions and the current leads. The alignment system is developed for the induction accelerator NDCX-II under construction at LBNL, an upgraded Neutralized Drift Compression experiment for research on warm dense matter and heavy ion fusion. Precise alignment is essential for NDCX-II, since the ion beam has a large energy spread associated with the rapid pulse compression such that misalignments lead to corkscrew deformation of the beam and reduced intensity at focus. The ability to align the magnetic axis of the pulsed solenoids to within 100 pm of the induction cell axis has been demonstrated.

  10. Field error lottery

    SciTech Connect

    Elliott, C.J.; McVey, B. ); Quimby, D.C. )

    1990-01-01

    The level of field errors in an FEL is an important determinant of its performance. We have computed 3D performance of a large laser subsystem subjected to field errors of various types. These calculations have been guided by simple models such as SWOOP. The technique of choice is utilization of the FELEX free electron laser code that now possesses extensive engineering capabilities. Modeling includes the ability to establish tolerances of various types: fast and slow scale field bowing, field error level, beam position monitor error level, gap errors, defocusing errors, energy slew, displacement and pointing errors. Many effects of these errors on relative gain and relative power extraction are displayed and are the essential elements of determining an error budget. The random errors also depend on the particular random number seed used in the calculation. The simultaneous display of the performance versus error level of cases with multiple seeds illustrates the variations attributable to stochasticity of this model. All these errors are evaluated numerically for comprehensive engineering of the system. In particular, gap errors are found to place requirements beyond mechanical tolerances of {plus minus}25{mu}m, and amelioration of these may occur by a procedure utilizing direct measurement of the magnetic fields at assembly time. 4 refs., 12 figs.

  11. TSGC and JSC Alignment

    NASA Technical Reports Server (NTRS)

    Sanchez, Humberto

    2013-01-01

    NASA and the SGCs are, by design, intended to work closely together and have synergistic Vision, Mission, and Goals. The TSGC affiliates and JSC have been working together, but not always in a concise, coordinated, nor strategic manner. Today we have a couple of simple ideas to present about how TSGC and JSC have started to work together in a more concise, coordinated, and strategic manner, and how JSC and non-TSG Jurisdiction members have started to collaborate: Idea I: TSGC and JSC Technical Alignment Idea II: Concept of Clusters.

  12. Modeling of Field-Aligned Guided Echoes in the Plasmasphere

    NASA Technical Reports Server (NTRS)

    Fung, Shing F.; Green, James L.

    2004-01-01

    The conditions under which high frequency (f>>f(sub uh)) long-range extraordinary-mode discrete field-aligned echoes observed by the Radio Plasma Imager (RPI) on board the Imager for Magnetopause-to-Aurora Global Exploration (IMAGE) satellite in the plasmasphere are investigated by ray tracing modeling. Field-aligned discrete echoes are most commonly observed by RPI in the plasmasphere although they are also observed over the polar cap region. The plasmasphere field-aligned echoes appearing as multiple echo traces at different virtual ranges are attributed to signals reflected successively between conjugate hemispheres that propagate along or nearly along closed geomagnetic field lines. The ray tracing simulations show that field-aligned ducts with as little as 1% density perturbations (depletions) and less than 10 wavelengths wide can guide nearly field-aligned propagating high frequency X mode waves. Effective guidance of wave at a given frequency and wave normal angle (Psi) depends on the cross-field density scale of the duct, such that ducts with stronger density depletions need to be wider in order to maintain the same gradient of refractive index across the magnetic field. While signal guidance by field aligned density gradient without ducting is possible only over the polar region, conjugate field-aligned echoes that have traversed through the equatorial region are most likely guided by ducting.

  13. Matrix error correction for digital data

    NASA Technical Reports Server (NTRS)

    Dotson, Ronald S. (Inventor)

    1992-01-01

    A technique for digital data error detection and correction is disclosed which adds alignment and checksum bytes to three sides of a matrix (24) of digital data to be protected. This technique is particularly used for the recording and storage (16,18) of digital data on video tape medium (14). The digital data is treated as a matrix block (24). Checksum and alignment bytes are added (20) to the digital data before tape storage and stripped (22) therefrom after successful alignment checks and data validation. In particular, the first column may be used to provide alignment bytes of a predetermined value for each row. The last column provides row checksum bytes for the data in each row. The last row provides column check sum bytes for each column, excluding the column of alignment bytes. The data location at the intersection of the row of column checksum bytes and the column of row checksum bytes may be used as a checksum byte for either the row or column checksum bytes.

  14. Using doppler radar images to estimate aircraft navigational heading error

    DOEpatents

    Doerry, Armin W.; Jordan, Jay D.; Kim, Theodore J.

    2012-07-03

    A yaw angle error of a motion measurement system carried on an aircraft for navigation is estimated from Doppler radar images captured using the aircraft. At least two radar pulses aimed at respectively different physical locations in a targeted area are transmitted from a radar antenna carried on the aircraft. At least two Doppler radar images that respectively correspond to the at least two transmitted radar pulses are produced. These images are used to produce an estimate of the yaw angle error.

  15. Inborn errors of metabolism

    MedlinePlus

    Metabolism - inborn errors of ... Bodamer OA. Approach to inborn errors of metabolism. In: Goldman L, Schafer AI, eds. Goldman's Cecil Medicine . 25th ed. Philadelphia, PA: Elsevier Saunders; 2015:chap 205. Rezvani I, Rezvani G. An ...

  16. Automatic phone segment alignment using statistical deviations from manual transcriptions

    NASA Astrophysics Data System (ADS)

    Hayakawa, Toru; Shirai, Katsuhiko; Kato, Hiroaki; Sagisaka, Yoshinori

    2002-11-01

    For precise temporal characteristic description, disagreements between manual labeling and automatic labeling were quantitatively analyzed with respect to the spectral feature extraction, adoption of acoustic matchers (HMM models), and acoustic matcher by itself. Error analysis shows that boundaries are shifted at phone boundaries where the speech spectrum changes quite rapidly. This disagreement results from the spectral feature extraction averaged over a given window. For the adoption of model, big errors are found at phone boundaries where the spectrum changes slowly. The third model-dependent errors are seen at phones whose duration cannot be shorter than the frame increment period times the HMM state number. To take into account these error factors individually to reduce the amount of alignment errors, we modified the automatic alignment results context-dependently using statistical characteristics of phone boundary displacement. This post-processing of boundary modification reduces boundary errors from 14.79 ms to 11.07 ms. Supplementary experiment shows that this improvement of about 4 ms corresponds to eight times of error reduction obtained by speaker adaptation of acoustic matchers. [Work supported by TAO, Japan.

  17. NIF pointing and centering systems and target alignment using a 351 nm laser source

    SciTech Connect

    Boege, S.J.; Bliss, E.S.; Chocol, C.J.; Holdener, F.R.; Miller, J.L.; Toeppen, J.S.; Vann, C.S.; Zacharias, R.A.

    1996-10-01

    The operational requirements of the National Ignition Facility (NIF) place tight constraints upon its alignment system. In general, the alignment system must establish and maintain the correct relationships between beam position, beam angle, laser component clear apertures, and the target. At the target, this includes adjustment of beam focus to obtain the correct spot size. This must be accomplished for all beamlines in a time consistent with planned shot rates and yet, in the front end and main laser, beam control functions cannot be initiated until the amplifiers have sufficiently cooled so as to minimize dynamic thermal distortions during and after alignment and wavefront optimization. The scope of the task dictates an automated system that implements parallel processes. We describe reticle choices and other alignment references, insertion of alignment beams, principles of operation of the Chamber Center Reference System 2048 and Target Alignment Sensor, and the anticipated alignment sequence that will occur between shots.

  18. Conditional alignment random fields for multiple motion sequence alignment.

    PubMed

    Kim, Minyoung

    2013-11-01

    We consider the multiple time-series alignment problem, typically focusing on the task of synchronizing multiple motion videos of the same kind of human activity. Finding an optimal global alignment of multiple sequences is infeasible, while there have been several approximate solutions, including iterative pairwise warping algorithms and variants of hidden Markov models. In this paper, we propose a novel probabilistic model that represents the conditional densities of the latent target sequences which are aligned with the given observed sequences through the hidden alignment variables. By imposing certain constraints on the target sequences at the learning stage, we have a sensible model for multiple alignments that can be learned very efficiently by the EM algorithm. Compared to existing methods, our approach yields more accurate alignment while being more robust to local optima and initial configurations. We demonstrate its efficacy on both synthetic and real-world motion videos including facial emotions and human activities. PMID:24051737

  19. Photoelectric angle converter

    NASA Astrophysics Data System (ADS)

    Podzharenko, Volodymyr A.; Kulakov, Pavlo I.

    2001-06-01

    The photo-electric angle transmitter of rotation is offered, at which the output voltage is linear function of entering magnitude. In a transmitter the linear phototransducer is used on the basis of pair photo diode -- operating amplifier, which output voltage is linear function of the area of an illuminated photosensitive stratum, and modulator of a light stream of the special shape, which ensures a linear dependence of this area from an angle of rotation. The transmitter has good frequent properties and can be used for dynamic measurements of an angular velocity and angle of rotation, in systems of exact drives and systems of autocontrol.

  20. Programming Errors in APL.

    ERIC Educational Resources Information Center

    Kearsley, Greg P.

    This paper discusses and provides some preliminary data on errors in APL programming. Data were obtained by analyzing listings of 148 complete and partial APL sessions collected from student terminal rooms at the University of Alberta. Frequencies of errors for the various error messages are tabulated. The data, however, are limited because they…

  1. Automatic time alignment of phonemes using acoustic- phonetic information

    NASA Astrophysics Data System (ADS)

    Hosom, John-Paul

    2000-10-01

    One requirement for researching and building spoken language systems is the availability of speech data that have been labeled and time-aligned at the phonetic level. Although manual phonetic alignment is considered more accurate than automatic methods, it is too time consuming to be commonly used for aligning large corpora. One reason for the greater accuracy of human labeling is that humans are better able to locate distinct events in the speech signal that correspond to specific phonetic characteristics. The development of the proposed method was motivated by the belief that if an automatic alignment method were to use such acoustic-phonetic information, its accuracy would become closer to that of human performance. Our hypothesis is that the integration of acoustic-phonetic information into a state-of-the-art automatic phonetic alignment system will significantly improve its accuracy and robustness. In developing an alignment system that uses acoustic- phonetic information, we use a measure of intensity discrimination in detecting voicing, glottalization, and burst-related impulses. We propose and implement a method of voicing determination that has average accuracy of 97.25% (which is an average 58% reduction in error over a baseline system), a fundamental-frequency extraction method with average absolute error of 3.12 Hz (representing a 45% reduction in error), and a method for detecting burst-related impulses with accuracy of 86.8% on the TIMIT corpus (which is a 45% reduction in error compared to reported results). In addition to these features, we propose a means of using acoustics-dependent transition information in the HMM framework. One aspect of successful implementation of this method is the use of distinctive phonetic features. To evaluate the proposed and baseline phonetic alignment systems, we measure agreement with manual alignments and robustness. On the TIMIT corpus, the proposed method has 92.57% agreement within 20 msec. The average agreement

  2. Sentence alignment using feed forward neural network.

    PubMed

    Fattah, Mohamed Abdel; Ren, Fuji; Kuroiwa, Shingo

    2006-12-01

    Parallel corpora have become an essential resource for work in multi lingual natural language processing. However, sentence aligned parallel corpora are more efficient than non-aligned parallel corpora for cross language information retrieval and machine translation applications. In this paper, we present a new approach to align sentences in bilingual parallel corpora based on feed forward neural network classifier. A feature parameter vector is extracted from the text pair under consideration. This vector contains text features such as length, punctuate score, and cognate score values. A set of manually prepared training data has been assigned to train the feed forward neural network. Another set of data was used for testing. Using this new approach, we could achieve an error reduction of 60% over length based approach when applied on English-Arabic parallel documents. Moreover this new approach is valid for any language pair and it is quite flexible approach since the feature parameter vector may contain more/less or different features than that we used in our system such as lexical match feature. PMID:17285688

  3. Evaluation of microRNA alignment techniques.

    PubMed

    Ziemann, Mark; Kaspi, Antony; El-Osta, Assam

    2016-08-01

    Genomic alignment of small RNA (smRNA) sequences such as microRNAs poses considerable challenges due to their short length (∼21 nucleotides [nt]) as well as the large size and complexity of plant and animal genomes. While several tools have been developed for high-throughput mapping of longer mRNA-seq reads (>30 nt), there are few that are specifically designed for mapping of smRNA reads including microRNAs. The accuracy of these mappers has not been systematically determined in the case of smRNA-seq. In addition, it is unknown whether these aligners accurately map smRNA reads containing sequence errors and polymorphisms. By using simulated read sets, we determine the alignment sensitivity and accuracy of 16 short-read mappers and quantify their robustness to mismatches, indels, and nontemplated nucleotide additions. These were explored in the context of a plant genome (Oryza sativa, ∼500 Mbp) and a mammalian genome (Homo sapiens, ∼3.1 Gbp). Analysis of simulated and real smRNA-seq data demonstrates that mapper selection impacts differential expression results and interpretation. These results will inform on best practice for smRNA mapping and enable more accurate smRNA detection and quantification of expression and RNA editing. PMID:27284164

  4. SPA: A Probabilistic Algorithm for Spliced Alignment

    PubMed Central

    van Nimwegen, Erik; Paul, Nicodeme; Sheridan, Robert; Zavolan, Mihaela

    2006-01-01

    Recent large-scale cDNA sequencing efforts show that elaborate patterns of splice variation are responsible for much of the proteome diversity in higher eukaryotes. To obtain an accurate account of the repertoire of splice variants, and to gain insight into the mechanisms of alternative splicing, it is essential that cDNAs are very accurately mapped to their respective genomes. Currently available algorithms for cDNA-to-genome alignment do not reach the necessary level of accuracy because they use ad hoc scoring models that cannot correctly trade off the likelihoods of various sequencing errors against the probabilities of different gene structures. Here we develop a Bayesian probabilistic approach to cDNA-to-genome alignment. Gene structures are assigned prior probabilities based on the lengths of their introns and exons, and based on the sequences at their splice boundaries. A likelihood model for sequencing errors takes into account the rates at which misincorporation, as well as insertions and deletions of different lengths, occurs during sequencing. The parameters of both the prior and likelihood model can be automatically estimated from a set of cDNAs, thus enabling our method to adapt itself to different organisms and experimental procedures. We implemented our method in a fast cDNA-to-genome alignment program, SPA, and applied it to the FANTOM3 dataset of over 100,000 full-length mouse cDNAs and a dataset of over 20,000 full-length human cDNAs. Comparison with the results of four other mapping programs shows that SPA produces alignments of significantly higher quality. In particular, the quality of the SPA alignments near splice boundaries and SPA's mapping of the 5′ and 3′ ends of the cDNAs are highly improved, allowing for more accurate identification of transcript starts and ends, and accurate identification of subtle splice variations. Finally, our splice boundary analysis on the human dataset suggests the existence of a novel non-canonical splice

  5. Error analysis of 3D laser scanning system for gangue monitoring

    NASA Astrophysics Data System (ADS)

    Hu, Shaoxing; Xia, Yuyang; Zhang, Aiwu

    2012-01-01

    The paper put forward the system error evaluation method of 3D scanning system for gangue monitoring; analyzed system errors including integrated error which can be avoided, and measurement error which needed whole analysis; firstly established the system equation after understanding the relationship of each structure. Then, used error independent effect and spread law to set up the entire error analysis system, and simulated the trend of error changing along X, Y, Z directions. At last, it is analytic that the laser rangefinder carries some weight in system error, and the horizontal and vertical scanning angles have some influences on system error in the certain vertical and horizontal scanning parameters.

  6. Improved astigmatic focus error detection method

    NASA Technical Reports Server (NTRS)

    Bernacki, Bruce E.

    1992-01-01

    All easy-to-implement focus- and track-error detection methods presently used in magneto-optical (MO) disk drives using pre-grooved media suffer from a side effect known as feedthrough. Feedthrough is the unwanted focus error signal (FES) produced when the optical head is seeking a new track, and light refracted from the pre-grooved disk produces an erroneous FES. Some focus and track-error detection methods are more resistant to feedthrough, but tend to be complicated and/or difficult to keep in alignment as a result of environmental insults. The astigmatic focus/push-pull tracking method is an elegant, easy-to-align focus- and track-error detection method. Unfortunately, it is also highly susceptible to feedthrough when astigmatism is present, with the worst effects caused by astigmatism oriented such that the tangential and sagittal foci are at 45 deg to the track direction. This disclosure outlines a method to nearly completely eliminate the worst-case form of feedthrough due to astigmatism oriented 45 deg to the track direction. Feedthrough due to other primary aberrations is not improved, but performance is identical to the unimproved astigmatic method.

  7. Optimal Number of Angle Images for Calculating Anterior Angle Volume and Iris Volume Measurements

    PubMed Central

    Blieden, Lauren S.; Chuang, Alice Z.; Baker, Laura A.; Bell, Nicholas P.; Fuller, Timothy S.; Mankiewicz, Kimberly A.; Feldman, Robert M.

    2015-01-01

    Purpose. We determined the optimal number of angle images required to obtain reliable measurements of trabecular-iris circumferential volume (TICV) and iris volume (IV) using swept-source Fourier domain anterior segment optical coherence tomography (SSFD-ASOCT) scans in narrow angle eyes. Methods. Scleral spur landmarks (SSL) were manually identified on ASOCT angle images from 128 meridians from each of 24 eyes with chronic primary angle closure (PAC) spectrum of disease. The anterior and posterior corneal curves, and the anterior and posterior iris surfaces were identified automatically by the anterior chamber analysis and interpretation (ACAI) software, then manually examined and edited by the reader if required. Trabecular-iris circumferential volume at 750 μm from SSL (TICV750) and IV were subsequently calculated using varying numbers of angle images. Threshold error was determined to be less than the lower 95% confidence limit of mean absolute percent error (MAPE) of the change in TICV or IV resulting from laser peripheral iridotomy, which would be 17% for TICV and 5% for IV, based on previous studies. The optimal number of angle images was the smallest number of images where MAPE was less than this threshold for TICV and IV. Results. A total of 32 equally-spaced angle images (16 meridians) was required to estimate TICV750 and 16 angle images (8 meridians) to estimate IV. Both were within 4.6% and 1.6% of MAPE, respectively. Conclusions. It is possible to determine TICV and IV parameters reliably in narrow angles without evaluating all 128 meridians obtained with SSFD-ASOCT. PMID:25829412

  8. The optical wing aligning device of the Langley Field tunnel

    NASA Technical Reports Server (NTRS)

    Norton, F H; Bacon, D L

    1921-01-01

    Described here is a convenient and accurate method of aligning the wing chord with the airflow. The device was developed to permit rapid and accurate alignment of airfoils and models with the airstream passing through the tunnel. It consists of three main parts: a projector, a reflector, and a target. The arrangement, which is shown in a figure, has proven satisfactory in operation. It is far better than the old method of sighting across a long batten, as the operator of a balance may see the target and correctly judge the accuracy of his alignment. Whereas the old method required two operators and several minutes time to align to within 1/10 degree, this method enables one operator to align a wing to within 1/100 of a degree in a few seconds. This method also has the advantage of being able to measure the angle of the wing while the tunnel is running. Thus, the true angle of incidence is shown.

  9. Reading Angles in Maps

    PubMed Central

    Izard, Véronique; O'Donnell, Evan; Spelke, Elizabeth S.

    2013-01-01

    Preschool children can navigate by simple geometric maps of the environment, but the nature of the geometric relations they use in map reading remains unclear. Here, children were tested specifically on their sensitivity to angle. Forty-eight children (age 47:15–53:30 months) were presented with fragments of geometric maps, in which angle sections appeared without any relevant length or distance information. Children were able to read these map fragments and compare 2D to 3D angles. However, this ability appeared both variable and fragile among the youngest children of the sample. These findings suggest that 4-year-old children begin to form an abstract concept of angle that applies both to 2D and 3D displays and that serves to interpret novel spatial symbols. PMID:23647223

  10. Angles, Time, and Proportion

    ERIC Educational Resources Information Center

    Pagni, David L.

    2005-01-01

    This article describes an investigation making connections between the time on an analog clock and the angle between the minute hand and the hour hand. It was posed by a middle school mathematics teacher. (Contains 8 tables and 6 figures.)

  11. Reading angles in maps.

    PubMed

    Izard, Véronique; O'Donnell, Evan; Spelke, Elizabeth S

    2014-01-01

    Preschool children can navigate by simple geometric maps of the environment, but the nature of the geometric relations they use in map reading remains unclear. Here, children were tested specifically on their sensitivity to angle. Forty-eight children (age 47:15-53:30 months) were presented with fragments of geometric maps, in which angle sections appeared without any relevant length or distance information. Children were able to read these map fragments and compare two-dimensional to three-dimensional angles. However, this ability appeared both variable and fragile among the youngest children of the sample. These findings suggest that 4-year-old children begin to form an abstract concept of angle that applies both to two-dimensional and three-dimensional displays and that serves to interpret novel spatial symbols. PMID:23647223

  12. Alignment, reverse alignment, and wrong sign Yukawa couplings in two Higgs doublet models

    NASA Astrophysics Data System (ADS)

    Biswas, Ambalika; Lahiri, Amitabha

    2016-06-01

    We consider two Higgs doublet models with a softly broken U(1) symmetry, for various limiting values of the scalar mixing angles α and β . These correspond to the Standard Model Higgs particle being the lighter C P -even scalar (alignment) or the heavier C P -even scalar (reverse alignment), and also the limit in which some of the Yukawa couplings of this particle are the opposite sign of the vector boson couplings (wrong sign). In these limits we impose a criterion for naturalness by demanding that quadratic divergences cancel at one loop. We plot the allowed masses of the remaining physical scalars based on naturalness, stability, perturbative unitarity, and constraints coming from the ρ parameter. We also calculate the h →γ γ decay width in the wrong sign limit.

  13. Current Methods for Automated Filtering of Multiple Sequence Alignments Frequently Worsen Single-Gene Phylogenetic Inference

    PubMed Central

    Tan, Ge; Muffato, Matthieu; Ledergerber, Christian; Herrero, Javier; Goldman, Nick; Gil, Manuel; Dessimoz, Christophe

    2015-01-01

    Phylogenetic inference is generally performed on the basis of multiple sequence alignments (MSA). Because errors in an alignment can lead to errors in tree estimation, there is a strong interest in identifying and removing unreliable parts of the alignment. In recent years several automated filtering approaches have been proposed, but despite their popularity, a systematic and comprehensive comparison of different alignment filtering methods on real data has been lacking. Here, we extend and apply recently introduced phylogenetic tests of alignment accuracy on a large number of gene families and contrast the performance of unfiltered versus filtered alignments in the context of single-gene phylogeny reconstruction. Based on multiple genome-wide empirical and simulated data sets, we show that the trees obtained from filtered MSAs are on average worse than those obtained from unfiltered MSAs. Furthermore, alignment filtering often leads to an increase in the proportion of well-supported branches that are actually wrong. We confirm that our findings hold for a wide range of parameters and methods. Although our results suggest that light filtering (up to 20% of alignment positions) has little impact on tree accuracy and may save some computation time, contrary to widespread practice, we do not generally recommend the use of current alignment filtering methods for phylogenetic inference. By providing a way to rigorously and systematically measure the impact of filtering on alignments, the methodology set forth here will guide the development of better filtering algorithms. PMID:26031838

  14. Current Methods for Automated Filtering of Multiple Sequence Alignments Frequently Worsen Single-Gene Phylogenetic Inference.

    PubMed

    Tan, Ge; Muffato, Matthieu; Ledergerber, Christian; Herrero, Javier; Goldman, Nick; Gil, Manuel; Dessimoz, Christophe

    2015-09-01

    Phylogenetic inference is generally performed on the basis of multiple sequence alignments (MSA). Because errors in an alignment can lead to errors in tree estimation, there is a strong interest in identifying and removing unreliable parts of the alignment. In recent years several automated filtering approaches have been proposed, but despite their popularity, a systematic and comprehensive comparison of different alignment filtering methods on real data has been lacking. Here, we extend and apply recently introduced phylogenetic tests of alignment accuracy on a large number of gene families and contrast the performance of unfiltered versus filtered alignments in the context of single-gene phylogeny reconstruction. Based on multiple genome-wide empirical and simulated data sets, we show that the trees obtained from filtered MSAs are on average worse than those obtained from unfiltered MSAs. Furthermore, alignment filtering often leads to an increase in the proportion of well-supported branches that are actually wrong. We confirm that our findings hold for a wide range of parameters and methods. Although our results suggest that light filtering (up to 20% of alignment positions) has little impact on tree accuracy and may save some computation time, contrary to widespread practice, we do not generally recommend the use of current alignment filtering methods for phylogenetic inference. By providing a way to rigorously and systematically measure the impact of filtering on alignments, the methodology set forth here will guide the development of better filtering algorithms. PMID:26031838

  15. 'Magic Angle Precession'

    SciTech Connect

    Binder, Bernd

    2008-01-21

    An advanced and exact geometric description of nonlinear precession dynamics modeling very accurately natural and artificial couplings showing Lorentz symmetry is derived. In the linear description it is usually ignored that the geometric phase of relativistic motion couples back to the orbital motion providing for a non-linear recursive precession dynamics. The high coupling strength in the nonlinear case is found to be a gravitomagnetic charge proportional to the precession angle and angular velocity generated by geometric phases, which are induced by high-speed relativistic rotations and are relevant to propulsion technologies but also to basic interactions. In the quantum range some magic precession angles indicating strong coupling in a phase-locked chaotic system are identified, emerging from a discrete time dynamical system known as the cosine map showing bifurcations at special precession angles relevant to heavy nuclei stability. The 'Magic Angle Precession' (MAP) dynamics can be simulated and visualized by cones rolling in or on each other, where the apex and precession angles are indexed by spin, charge or precession quantum numbers, and corresponding magic angles. The most extreme relativistic warping and twisting effect is given by the Dirac spinor half spin constellation with 'Hyperdiamond' MAP, which resembles quark confinement.

  16. Refractive errors in children.

    PubMed

    Tongue, A C

    1987-12-01

    Optical correction of refractive errors in infants and young children is indicated when the refractive errors are sufficiently large to cause unilateral or bilateral amblyopia, if they are impairing the child's ability to function normally, or if the child has accommodative strabismus. Screening for refractive errors is important and should be performed as part of the annual physical examination in all verbal children. Screening for significant refractive errors in preverbal children is more difficult; however, the red reflex test of Bruckner is useful for the detection of anisometropic refractive errors. The photorefraction test, which is an adaptation of Bruckner's red reflex test, may prove to be a useful screening device for detecting bilateral as well as unilateral refractive errors. Objective testing as well as subjective testing enables ophthalmologists to prescribe proper optical correction for refractive errors for infants and children of any age. PMID:3317238

  17. Error-prone signalling.

    PubMed

    Johnstone, R A; Grafen, A

    1992-06-22

    The handicap principle of Zahavi is potentially of great importance to the study of biological communication. Existing models of the handicap principle, however, make the unrealistic assumption that communication is error free. It seems possible, therefore, that Zahavi's arguments do not apply to real signalling systems, in which some degree of error is inevitable. Here, we present a general evolutionarily stable strategy (ESS) model of the handicap principle which incorporates perceptual error. We show that, for a wide range of error functions, error-prone signalling systems must be honest at equilibrium. Perceptual error is thus unlikely to threaten the validity of the handicap principle. Our model represents a step towards greater realism, and also opens up new possibilities for biological signalling theory. Concurrent displays, direct perception of quality, and the evolution of 'amplifiers' and 'attenuators' are all probable features of real signalling systems, yet handicap models based on the assumption of error-free communication cannot accommodate these possibilities. PMID:1354361

  18. Fourier transform interferometer alignment method.

    PubMed

    Goldberg, Kenneth A; Naulleau, Patrick; Bokor, Jeffrey

    2002-08-01

    A rapid and convenient method has been developed to facilitate the alignment of the image-plane components of point-diffraction interferometers, including the phase-shifting point-diffraction interferometer. In real time, the Fourier transform of the detected image is used to calculate a pseudoimage of the electric field in the image plane of the test optic where thecritical alignment o f variousoptical components is performed. Reconstruction of the pseudoimage is similar to off-axis, Fourier transform holography. Intermediate steps in the alignment procedure are described. Fine alignment is aided by the introduction and optimization of a global-contrast parameter that is easily calculated from the Fourier transform. Additional applications include the alignment of image-plane apertures in general optical systems, the rapid identification of patterned image-plane alignment marks, and the probing of important image-plane field properties. PMID:12153074

  19. Nuclear reactor internals alignment configuration

    DOEpatents

    Gilmore, Charles B.; Singleton, Norman R.

    2009-11-10

    An alignment system that employs jacking block assemblies and alignment posts around the periphery of the top plate of a nuclear reactor lower internals core shroud to align an upper core plate with the lower internals and the core shroud with the core barrel. The distal ends of the alignment posts are chamfered and are closely received within notches machined in the upper core plate at spaced locations around the outer circumference of the upper core plate. The jacking block assemblies are used to center the core shroud in the core barrel and the alignment posts assure the proper orientation of the upper core plate. The alignment posts may alternately be formed in the upper core plate and the notches may be formed in top plate.

  20. Can a surgeon drill accurately at a specified angle?

    PubMed Central

    Brioschi, Valentina; Cook, Jodie; Arthurs, Gareth I

    2016-01-01

    Objectives To investigate whether a surgeon can drill accurately a specified angle and whether surgeon experience, task repetition, drill bit size and perceived difficulty influence drilling angle accuracy. Methods The sample population consisted of final-year students (n=25), non-specialist veterinarians (n=22) and board-certified orthopaedic surgeons (n=8). Each participant drilled a hole twice in a horizontal oak plank at 30°, 45°, 60°, 80°, 85° and 90° angles with either a 2.5  or a 3.5 mm drill bit. Participants then rated the perceived difficulty to drill each angle. The true angle of each hole was measured using a digital goniometer. Results Greater drilling accuracy was achieved at angles closer to 90°. An error of ≤±4° was achieved by 84.5 per cent of participants drilling a 90° angle compared with approximately 20 per cent of participants drilling a 30–45° angle. There was no effect of surgeon experience, task repetition or drill bit size on the mean error for intended versus achieved angle. Increased perception of difficulty was associated with the more acute angles and decreased accuracy, but not experience level. Clinical significance This study shows that surgeon ability to drill accurately (within ±4° error) is limited, particularly at angles ≤60°. In situations where drill angle is critical, use of computer-assisted navigation or custom-made drill guides may be preferable. PMID:27547423

  1. Detecting the limits of regulatory element conservation anddivergence estimation using pairwise and multiple alignments

    SciTech Connect

    Pollard, Daniel A.; Moses, Alan M.; Iyer, Venky N.; Eisen,Michael B.

    2006-08-14

    Background: Molecular evolutionary studies of noncodingsequences rely on multiple alignments. Yet how multiple alignmentaccuracy varies across sequence types, tree topologies, divergences andtools, and further how this variation impacts specific inferences,remains unclear. Results: Here we develop a molecular evolutionsimulation platform, CisEvolver, with models of background noncoding andtranscription factor binding site evolution, and use simulated alignmentsto systematically examine multiple alignment accuracy and its impact ontwo key molecular evolutionary inferences: transcription factor bindingsite conservation and divergence estimation. We find that the accuracy ofmultiple alignments is determined almost exclusively by the pairwisedivergence distance of the two most diverged species and that additionalspecies have a negligible influence on alignment accuracy. Conservedtranscription factor binding sites align better than surroundingnoncoding DNA yet are often found to be misaligned at relatively shortdivergence distances, such that studies of binding site gain and losscould easily be confounded by alignment error. Divergence estimates frommultiple alignments tend to be overestimated at short divergencedistances but reach a tool specific divergence at which they cease toincrease, leading to underestimation at long divergences. Our moststriking finding was that overall alignment accuracy, binding sitealignment accuracy and divergence estimation accuracy vary greatly acrossbranches in a tree and are most accurate for terminal branches connectingsister taxa and least accurate for internal branches connectingsub-alignments. Conclusions: Our results suggest that variation inalignment accuracy can lead to errors in molecular evolutionaryinferences that could be construed as biological variation. Thesefindings have implications for which species to choose for analyses, whatkind of errors would be expected for a given set of species and howmultiple alignment tools and

  2. Aligned Defrosting Dunes

    NASA Technical Reports Server (NTRS)

    2004-01-01

    17 August 2004 This July 2004 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a group of aligned barchan sand dunes in the martian north polar region. At the time, the dunes were covered with seasonal frost, but the frost had begun to sublime away, leaving dark spots and dark outlines around the dunes. The surrounding plains exhibit small, diffuse spots that are also the result of subliming seasonal frost. This northern spring image, acquired on a descending ground track (as MGS was moving north to south on the 'night' side of Mars) is located near 78.8oN, 34.8oW. The image covers an area about 3 km (1.9 mi) across and sunlight illuminates the scene from the upper left.

  3. Alignment system for encoders

    NASA Technical Reports Server (NTRS)

    Villani, Daniel D. (Inventor)

    1988-01-01

    An improved encoder alignment system is disclosed which provides an indication of the extent of misalignment and a measure of the rate at which the misalignment may be changing. The invention is adapted for use with a conventional encoder which provides a digital coarse word having at least significant bit and a digital fine word having a least significant bit and a most significant bit. The invention generates the exclusive or of the least significant bit of the coarse digital signal and the least significant bit of the fine digital signal to provide a first signal. The invention then generates the exclusive or of the first signal and the complement of the most significant bit of the fine digital signal to provide an output signal which represents the misalignment of the encoder.

  4. Lunar Alignments - Identification and Analysis

    NASA Astrophysics Data System (ADS)

    González-García, A. César

    Lunar alignments are difficult to establish given the apparent lack of written accounts clearly pointing toward lunar alignments for individual temples. While some individual cases are reviewed and highlighted, the weight of the proof must fall on statistical sampling. Some definitions for the lunar alignments are provided in order to clarify the targets, and thus, some new tools are provided to try to test the lunar hypothesis in several cases, especially in megalithic astronomy.

  5. Errors in thermochromic liquid crystal thermometry

    NASA Astrophysics Data System (ADS)

    Wiberg, Roland; Lior, Noam

    2004-09-01

    This article experimentally investigates and assesses the errors that may be incurred in the hue-based thermochromic liquid crystal thermochromic liquid crystal (TLC) method, and their causes. The errors include response time, hysteresis, aging, surrounding illumination disturbance, direct illumination and viewing angle, amount of light into the camera, TLC thickness, digital resolution of the image conversion system, and measurement noise. Some of the main conclusions are that: (1) The 3×8 bits digital representation of the red green and blue TLC color values produces a temperature measurement error of typically 1% of the TLC effective temperature range, (2) an eight-fold variation of the light intensity into the camera produced variations, which were not discernable from the digital resolution error, (3) this temperature depends on the TLC film thickness, and (4) thicker films are less susceptible to aging and thickness nonuniformities.

  6. Major axis alignments of poor cluster dominant galaxies

    NASA Astrophysics Data System (ADS)

    Fuller, T.; West, M.; Bridges, T.

    1996-12-01

    The MKW and AWM poor clusters are very different environments from rich Abell clusters. We obtained images with the Jacobus Kapteyn Telescope of 21 brightest cluster members (BCM) of the MKW/AWM clusters and determined that the major axis of the BCMs exhibits alignments similar to those in rich cluster dominant galaxies. Specifically, the major axes of the poor cluster BCMs point to nearby (< 20 Mpc) Abell clusters. Using the Kolmolgorov-Smirnov test, we reject the hypothesis that the position angles are randomly distributed at the 97% confidence level. The processes responsible for dominant galaxy alignments are therefore independent of cluster richness.

  7. A halo model for intrinsic alignments of galaxy ellipticities

    NASA Astrophysics Data System (ADS)

    Schneider, Michael D.; Bridle, Sarah

    2010-03-01

    Correlations between intrinsic ellipticities of galaxies are a potentially important systematic error when constraining dark energy properties from weak gravitational lensing (cosmic shear) surveys. In the absence of perfectly known galaxy redshifts, some modelling of the galaxy intrinsic alignments is likely to be required to extract the lensing signal to sufficient accuracy. We present a new model based on the placement of galaxies into dark matter haloes. The central galaxy ellipticity follows the large-scale potential and, in the simplest case, the satellite galaxies point at the halo centre. The two-halo term is then dominated by the linear-alignment model and the one-halo term provides a motivated extension of intrinsic alignment models to small scales. We provide fitting formulae for the spatial projected source power spectra for both intrinsic-intrinsic (II) and gravitational-intrinsic (GI) correlations. We illustrate the potential impact of ignoring intrinsic alignments on cosmological parameter constraints from non-tomographic surveys, finding that σ8 could be underestimated by up to the size of the current 1σ error bar from cosmic shear if very small scales are included in the analysis. Finally, we highlight areas of interest for numerical simulations of dark matter clustering and galaxy formation that can further constrain the intrinsic alignment signal.

  8. Assembly and alignment of infrared refractive system

    NASA Astrophysics Data System (ADS)

    Yang, Lin; Lin, Jian-chun; Wang, Ya-jing; Chen, Fan-sheng

    2013-09-01

    Optical systems for scientific instrumentation frequently include lens or mirrors with critical mechanical requirements. Position issues of those components are inextricably bound to the efficiency of the instrument. The position referring to the lens system mainly means spacer and rotation of all elements concerned. Instrument could not be completed without the accuracy assembly even the previous design was top one. The alignment of infrared optical system always is a tough thing due to the IR material being opaque to visible light which hardly effect on the imaging ability of the system. In this paper a large-aperture IR refractive system was described in details and the alignment of this system was presented. The brief work describes the assembly and integration of the camera barrel in lab. First of all, all the mechanical elements must be manufactured with high accuracy requirements to meet alignment tolerances and minimum errors mostly could be ignored. The rotations relative to the optical axis were hardy restricted by the space between barrel and cells. The lens vertex displacements were determined through high accuracy titanium alloy spacer. So the actual shape data of the optical lenses were obtained by coordinate measuring machining (CMM) to calculate the real space between lenses after alignment1 done. All the measured results were critical for instruction of the practical assemble. Based on the properties and tolerances of the system, the camera barrel includes sets of six lenses with their respective supports and cells which are composed of two parts: the flied lens group and the relay lenses group. The first one was aligned by the geometry centering used CMM. And the relay lenses were integrated one by one after centered individually with a classical centering instrument. Then the two separate components were assembled under the monitor of the CMM with micron precision. Three parameters on the opti-mechanical elements which include decenter, tilt and

  9. Divert visual angle through eyeball recognition

    NASA Astrophysics Data System (ADS)

    Qi, Cao; Qiao, Yi; Cheng, Yuan; Cui, Honglu; Sun, Li

    2009-10-01

    Thanks to the development of network, video devices are used in various aspects of our lives such as video conference, video call, etc. It is, however, very common that people tend to look at the computer screen instead of the video capture device, which can affect the communication. We present a novel approach to solve this problem. Through estimating the divert head angle and eyeball location recognition, we can estimate the visual angle. By moving the eyeball to adjust visual line, it looks like that we're looking at each other. Our work is on the basis of face alignment and there is a geometric 3D model and novel R -α, K -β relationship analysis methods adopted in this paper.

  10. Aircraft system modeling error and control error

    NASA Technical Reports Server (NTRS)

    Kulkarni, Nilesh V. (Inventor); Kaneshige, John T. (Inventor); Krishnakumar, Kalmanje S. (Inventor); Burken, John J. (Inventor)

    2012-01-01

    A method for modeling error-driven adaptive control of an aircraft. Normal aircraft plant dynamics is modeled, using an original plant description in which a controller responds to a tracking error e(k) to drive the component to a normal reference value according to an asymptote curve. Where the system senses that (1) at least one aircraft plant component is experiencing an excursion and (2) the return of this component value toward its reference value is not proceeding according to the expected controller characteristics, neural network (NN) modeling of aircraft plant operation may be changed. However, if (1) is satisfied but the error component is returning toward its reference value according to expected controller characteristics, the NN will continue to model operation of the aircraft plant according to an original description.

  11. Gold Alignment and Internal Dissipation

    NASA Astrophysics Data System (ADS)

    Lazarian, A.

    1997-07-01

    The measures of mechanical alignment are obtained for both prolate and oblate grains whose temperatures are comparable to the grain kinetic energy divided by k, the Boltzmann constant. For such grains, the alignment of angular momentum, J, with the axis of maximal inertia, a, is only partial, which substantially alters the mechanical alignment as compared with the results obtained by Lazarian and Roberge, Hanany, & Messinger under the assumption of perfect alignment. We also describe Gold alignment when the Barnett dissipation is suppressed and derive an analytical expression that relates the measure of alignment to the parameters of grain nonsphericity and the direction of the gas-grain drift. This solution provides the lower limit for the measure of alignment, while the upper limit is given by the method derived by Lazarian. Using the results of a recent study of incomplete internal relaxation by Lazarian & Roberge, we find measures of alignment for the whole range of ratios of grain rotational energy to kTs, where Ts is the grain temperature. To describe alignment for mildly supersonic drifts, we suggest an analytical approach that provides good correspondence with the results of direct numerical simulations by Roberge, Hanany, & Messinger. We also extend our approach to account for simultaneous action of the Gold and Davis-Greenstein mechanisms.

  12. Homogeneous alignment of nematic liquid crystals by ion beam etched surfaces

    NASA Technical Reports Server (NTRS)

    Wintucky, E. G.; Mahmood, R.; Johnson, D. L.

    1979-01-01

    A wide range of the ion beam etch parameters are capable of producing uniform homogeneous alignment of nematic liquid crystals on SiO2 films. The alignment surfaces were generated by obliquely incident argon ions; a smaller range of ion beam parameters was also investigated with ZrO2 films and found suitable for homogeneous alignment. Extinction ratios were very high, and twist and tilt-bias angles were very small. The SEM results indicate a parallel oriented surface structure on the ion beam etched surfaces which may determine alignment.

  13. Liquid Crystal Alignment with a Photo-Crosslinkable and Solvent-Soluble Polyimide Film

    NASA Astrophysics Data System (ADS)

    Lee, Wen-Chin; Hsu, Chain-Shu; Wu, Shin-Tson

    2000-05-01

    A new photo-crosslinkable and solvent-soluble polyimide containing cinnamate side chains (PICA) was developed for aligning nematic liquid crystals (LCs). Good LC alignment was achieved by exposing a long-wave linearly polarized ultraviolet (LPUV) light to the PICA film. The LC alignment direction is found perpendicular to the polarization axis of the incident LPUV light. The uniform alignment of LC molecules induced by PICA films remains intact after being heated at 85°C for 450 hours. A small pretilt angle on the PICA film was generated by the double exposure method.

  14. Pairagon: a highly accurate, HMM-based cDNA-to-genome aligner

    PubMed Central

    Lu, David V.; Brown, Randall H.; Arumugam, Manimozhiyan; Brent, Michael R.

    2009-01-01

    Motivation: The most accurate way to determine the intron–exon structures in a genome is to align spliced cDNA sequences to the genome. Thus, cDNA-to-genome alignment programs are a key component of most annotation pipelines. The scoring system used to choose the best alignment is a primary determinant of alignment accuracy, while heuristics that prevent consideration of certain alignments are a primary determinant of runtime and memory usage. Both accuracy and speed are important considerations in choosing an alignment algorithm, but scoring systems have received much less attention than heuristics. Results: We present Pairagon, a pair hidden Markov model based cDNA-to-genome alignment program, as the most accurate aligner for sequences with high- and low-identity levels. We conducted a series of experiments testing alignment accuracy with varying sequence identity. We first created ‘perfect’ simulated cDNA sequences by splicing the sequences of exons in the reference genome sequences of fly and human. The complete reference genome sequences were then mutated to various degrees using a realistic mutation simulator and the perfect cDNAs were aligned to them using Pairagon and 12 other aligners. To validate these results with natural sequences, we performed cross-species alignment using orthologous transcripts from human, mouse and rat. We found that aligner accuracy is heavily dependent on sequence identity. For sequences with 100% identity, Pairagon achieved accuracy levels of >99.6%, with one quarter of the errors of any other aligner. Furthermore, for human/mouse alignments, which are only 85% identical, Pairagon achieved 87% accuracy, higher than any other aligner. Availability: Pairagon source and executables are freely available at http://mblab.wustl.edu/software/pairagon/ Contact: davidlu@wustl.edu; brent@cse.wustl.edu Supplementary information: Supplementary data are available at Bioinformatics online. PMID:19414532

  15. Shape and alignment measurement of the heliostat by laser deflectometry

    NASA Astrophysics Data System (ADS)

    Xu, Wenbin; Lu, Zhenwu; Liu, Hua; Zhang, Hongxin; Ni, Zhengguo

    2008-08-01

    In the solar tower thermal power generation system, the precision of the slope angle of the heliostat is the major factor, which influences the efficiency of the system, consequently, this angle should be tested accurately. In this paper, the methods based on laser deflectometry are proposed to measure the shape error of the mirror facet and the connected error of the facets; such apparatus and corresponding software packages are developed. With the help of these two apparatus, the heliostat of 1002, consisting of 55 mirror facets of 1.8182 m2; (hexagon), for the 1MWe solar tower power plant in Beijing are measured and connected successfully.

  16. Photo-aligned blend films of azobenzene-containing polyimides with and without side-chains for inducing inclined alignment of liquid crystal molecules

    NASA Astrophysics Data System (ADS)

    Usami, Kiyoaki; Sakamoto, Kenji

    2011-08-01

    We have succeeded in controlling the pretilt angle of liquid crystal (LC) molecules over the whole range of 0 to 90° by using photo-aligned blend films of two azobenzene-containing polyimides (Azo-PIs) with and without side-chains. The Azo-PIs were synthesized from pyromellitic dianhydride and a mixture of 4,4'-diaminoazobenzene and 4-(4'-propylbi(cyclohexan)-4-yl)phenyl 3,5-diaminobenzoate (PBCP-DABA). PBCP-DABA is a diamine to introduce a side-chain structure into the polyimide. Defect-free uniform LC alignment was obtained in the pretilt angle (θp) ranges of θp ≤ 11° and θp ≥ 78°. Previously, we reported that the pretilt angle can be controlled using pure photo-aligned films of Azo-PIs with different molar fractions of PBCP-DABA. For the pure photo-aligned films, the defect-free pretilt angle ranges were θp < 5° and θp ≥ 85°. These results suggest that the azimuthal anchoring strength of the blend Azo-PI film is stronger than that of the pure films of Azo-PIs with side-chains, at least for the pretilt angle range from 5 to 11°. We found that the defect-free pretilt angle range can be extended by using the blend Azo-PI films instead of the pure Azo-PI films.

  17. Nanofibril Alignment in Flow Focusing: Measurements and Calculations.

    PubMed

    Håkansson, Karl M O; Lundell, Fredrik; Prahl-Wittberg, Lisa; Söderberg, L Daniel

    2016-07-14

    Alignment of anisotropic supermolecular building blocks is crucial to control the properties of many novel materials. In this study, the alignment process of cellulose nanofibrils (CNFs) in a flow-focusing channel has been investigated using small-angle X-ray scattering (SAXS) and modeled using the Smoluchowski equation, which requires a known flow field as input. This flow field was investigated experimentally using microparticle-tracking velocimetry and by numerically applying the two-fluid level set method. A semidilute dispersion of CNFs was modeled as a continuous phase, with a higher viscosity as compared to that of water. Furthermore, implementation of the Smoluchowski equation also needed the rotational Brownian diffusion coefficient, which was experimentally determined in a shear viscosity measurement. The order of the nanofibrils was found to increase during extension in the flow-focusing channel, after which rotational diffusion acted on the orientation distribution, driving the orientation of the fibrils toward isotropy. The main features of the alignment and dealignment processes were well predicted by the numerical model, but the model overpredicted the alignment at higher rates of extension. The apparent rotational diffusion coefficient was seen to increase steeply as the degree of alignment increased. Thus, the combination of SAXS measurements and modeling provides the necessary framework for quantified studies of hydrodynamic alignment, followed by relaxation toward isotropy. PMID:27294285

  18. Robust angle-independent blood velocity estimation based on dual-angle plane wave imaging.

    PubMed

    Fadnes, Solveig; Ekroll, Ingvild Kinn; Nyrnes, Siri Ann; Torp, Hans; Lovstakken, Lasse

    2015-10-01

    Two-dimensional blood velocity estimation has shown potential to solve the angle-dependency of conventional ultrasound flow imaging. Clutter filtering, however, remains a major challenge for large beam-to-flow angles, leading to signal drop-outs and corrupted velocity estimates. This work presents and evaluates a compounding speckle tracking (ST) algorithm to obtain robust angle-independent 2-D blood velocity estimates for all beam-to-flow angles. A dual-angle plane wave imaging setup with full parallel receive beamforming is utilized to achieve high-frame-rate speckle tracking estimates from two scan angles, which may be compounded to obtain velocity estimates of increased robustness. The acquisition also allows direct comparison with vector Doppler (VD) imaging. Absolute velocity bias and root-mean-square (RMS) error of the compounding ST estimations were investigated using simulations of a rotating flow phantom with low velocities ranging from 0 to 20 cm/s. In a challenging region where the estimates were influenced by clutter filtering, the bias and RMS error for the compounding ST estimates were 11% and 2 cm/s, a significant reduction compared with conventional single-angle ST (22% and 4 cm/s) and VD (36% and 6 cm/s). The method was also tested in vivo for vascular and neonatal cardiac imaging. In a carotid artery bifurcation, the obtained blood velocity estimates showed that the compounded ST method was less influenced by clutter filtering than conventional ST and VD methods. In the cardiac case, it was observed that ST velocity estimation is more affected by low signal-to-noise (SNR) than VD. However, with sufficient SNR the in vivo results indicated that a more robust angle-independent blood velocity estimator is obtained using compounded speckle tracking compared with conventional ST and VD methods. PMID:26470038

  19. Error detection method

    DOEpatents

    Olson, Eric J.

    2013-06-11

    An apparatus, program product, and method that run an algorithm on a hardware based processor, generate a hardware error as a result of running the algorithm, generate an algorithm output for the algorithm, compare the algorithm output to another output for the algorithm, and detect the hardware error from the comparison. The algorithm is designed to cause the hardware based processor to heat to a degree that increases the likelihood of hardware errors to manifest, and the hardware error is observable in the algorithm output. As such, electronic components may be sufficiently heated and/or sufficiently stressed to create better conditions for generating hardware errors, and the output of the algorithm may be compared at the end of the run to detect a hardware error that occurred anywhere during the run that may otherwise not be detected by traditional methodologies (e.g., due to cooling, insufficient heat and/or stress, etc.).

  20. Evaluation of Eight Methods for Aligning Orientation of Two Coordinate Systems.

    PubMed

    Mecheri, Hakim; Robert-Lachaine, Xavier; Larue, Christian; Plamondon, André

    2016-08-01

    The aim of this study was to evaluate eight methods for aligning the orientation of two different local coordinate systems. Alignment is very important when combining two different systems of motion analysis. Two of the methods were developed specifically for biomechanical studies, and because there have been at least three decades of algorithm development in robotics, it was decided to include six methods from this field. To compare these methods, an Xsens sensor and two Optotrak clusters were attached to a Plexiglas plate. The first optical marker cluster was fixed on the sensor and 20 trials were recorded. The error of alignment was calculated for each trial, and the mean, the standard deviation, and the maximum values of this error over all trials were reported. One-way repeated measures analysis of variance revealed that the alignment error differed significantly across the eight methods. Post-hoc tests showed that the alignment error from the methods based on angular velocities was significantly lower than for the other methods. The method using angular velocities performed the best, with an average error of 0.17 ± 0.08 deg. We therefore recommend this method, which is easy to perform and provides accurate alignment. PMID:27245737

  1. The Error in Total Error Reduction

    PubMed Central

    Witnauer, James E.; Urcelay, Gonzalo P.; Miller, Ralph R.

    2013-01-01

    Most models of human and animal learning assume that learning is proportional to the discrepancy between a delivered outcome and the outcome predicted by all cues present during that trial (i.e., total error across a stimulus compound). This total error reduction (TER) view has been implemented in connectionist and artificial neural network models to describe the conditions under which weights between units change. Electrophysiological work has revealed that the activity of dopamine neurons is correlated with the total error signal in models of reward learning. Similar neural mechanisms presumably support fear conditioning, human contingency learning, and other types of learning. Using a computational modelling approach, we compared several TER models of associative learning to an alternative model that rejects the TER assumption in favor of local error reduction (LER), which assumes that learning about each cue is proportional to the discrepancy between the delivered outcome and the outcome predicted by that specific cue on that trial. The LER model provided a better fit to the reviewed data than the TER models. Given the superiority of the LER model with the present data sets, acceptance of TER should be tempered. PMID:23891930

  2. Identification and Minimization of Errors in Doppler Global Velocimetry Measurements

    NASA Technical Reports Server (NTRS)

    Meyers, James F.; Lee, Joseph W.

    2000-01-01

    A systematic laboratory investigation was conducted to identify potential measurement error sources in Doppler Global Velocimetry technology. Once identified, methods were developed to eliminate or at least minimize the effects of these errors. The areas considered included the Iodine vapor cell, optical alignment, scattered light characteristics, noise sources, and the laser. Upon completion the demonstrated measurement uncertainty was reduced to 0.5 m/sec.

  3. Alignment and temperature effects in liquid-crystal-based active polarimetry.

    PubMed

    Gladish, James C; Duncan, Donald D

    2014-06-20

    It is well known that in liquid crystal (LC)-based active polarimetry, alignment and temperature effects impact polarimeter performance. Practically speaking, when constructing a polarimetric measurement system from LC variable retarders (LCVRs), unavoidable alignment and temperature uncertainties will occur, leading to systematic error that propagates to the Mueller matrix. Typical calibration methods use only a single metric to assess polarimeter performance (the condition number) and often ignore the relationship between systematic error and specific Mueller matrix elements. Here we explore alignment and temperature effects in a Stokes generator and polarimeter, each consisting of two LCVRs, through a series of simulations to calibrate the polarimeter and measure the Mueller matrix of air. We achieve this by modifying an existing LCVR model to incorporate alignment and temperature effects. This new approach offers insight into employing LCVRs individually and associating particular Mueller matrix element error with specific LCVR effects. PMID:24979431

  4. Pretile angle control of liquid crystal from homogeneous to homeotropic using photocurable prepolymer

    NASA Astrophysics Data System (ADS)

    Lee, Jeong-Hun; Kang, Daeseung

    2012-03-01

    We study pretilt angle control of liquid crystal from homogeneous to homeotropic using phase separation techniques of photocurable prepolymer by UV irradiation. Pretilt angle was controlled by changing the weight ratio of LC/photocurable prepolymer in homogeneous polyimide (PI) coated LC cell. Homogeneous alignment was observed in LC/photocurable prepolymer mixture of weight ratio of 99.9:0.1 after UV irradiation for 20 minutes. Tilted alignment was observed in weight ratio of 99.8:0.2. Finally homeotropic alignment was observed in weight ratio of over 99.7:0.3.

  5. Error coding simulations

    NASA Technical Reports Server (NTRS)

    Noble, Viveca K.

    1993-01-01

    There are various elements such as radio frequency interference (RFI) which may induce errors in data being transmitted via a satellite communication link. When a transmission is affected by interference or other error-causing elements, the transmitted data becomes indecipherable. It becomes necessary to implement techniques to recover from these disturbances. The objective of this research is to develop software which simulates error control circuits and evaluate the performance of these modules in various bit error rate environments. The results of the evaluation provide the engineer with information which helps determine the optimal error control scheme. The Consultative Committee for Space Data Systems (CCSDS) recommends the use of Reed-Solomon (RS) and convolutional encoders and Viterbi and RS decoders for error correction. The use of forward error correction techniques greatly reduces the received signal to noise needed for a certain desired bit error rate. The use of concatenated coding, e.g. inner convolutional code and outer RS code, provides even greater coding gain. The 16-bit cyclic redundancy check (CRC) code is recommended by CCSDS for error detection.

  6. Model Error Budgets

    NASA Technical Reports Server (NTRS)

    Briggs, Hugh C.

    2008-01-01

    An error budget is a commonly used tool in design of complex aerospace systems. It represents system performance requirements in terms of allowable errors and flows these down through a hierarchical structure to lower assemblies and components. The requirements may simply be 'allocated' based upon heuristics or experience, or they may be designed through use of physics-based models. This paper presents a basis for developing an error budget for models of the system, as opposed to the system itself. The need for model error budgets arises when system models are a principle design agent as is increasingly more common for poorly testable high performance space systems.

  7. Error coding simulations

    NASA Astrophysics Data System (ADS)

    Noble, Viveca K.

    1993-11-01

    There are various elements such as radio frequency interference (RFI) which may induce errors in data being transmitted via a satellite communication link. When a transmission is affected by interference or other error-causing elements, the transmitted data becomes indecipherable. It becomes necessary to implement techniques to recover from these disturbances. The objective of this research is to develop software which simulates error control circuits and evaluate the performance of these modules in various bit error rate environments. The results of the evaluation provide the engineer with information which helps determine the optimal error control scheme. The Consultative Committee for Space Data Systems (CCSDS) recommends the use of Reed-Solomon (RS) and convolutional encoders and Viterbi and RS decoders for error correction. The use of forward error correction techniques greatly reduces the received signal to noise needed for a certain desired bit error rate. The use of concatenated coding, e.g. inner convolutional code and outer RS code, provides even greater coding gain. The 16-bit cyclic redundancy check (CRC) code is recommended by CCSDS for error detection.

  8. Drive alignment pays maintenance dividends

    SciTech Connect

    Fedder, R.

    2008-12-15

    Proper alignment of the motor and gear drive on conveying and processing equipment will result in longer bearing and coupling life, along with lower maintenance costs. Selecting an alignment free drive package instead of a traditional foot mounted drive and motor is a major advancement toward these goals. 4 photos.

  9. Lexical alignment in triadic communication

    PubMed Central

    Foltz, Anouschka; Gaspers, Judith; Thiele, Kristina; Stenneken, Prisca; Cimiano, Philipp

    2015-01-01

    Lexical alignment refers to the adoption of one’s interlocutor’s lexical items. Accounts of the mechanisms underlying such lexical alignment differ (among other aspects) in the role assigned to addressee-centered behavior. In this study, we used a triadic communicative situation to test which factors may modulate the extent to which participants’ lexical alignment reflects addressee-centered behavior. Pairs of naïve participants played a picture matching game and received information about the order in which pictures were to be matched from a voice over headphones. On critical trials, participants did or did not hear a name for the picture to be matched next over headphones. Importantly, when the voice over headphones provided a name, it did not match the name that the interlocutor had previously used to describe the object. Participants overwhelmingly used the word that the voice over headphones provided. This result points to non-addressee-centered behavior and is discussed in terms of disrupting alignment with the interlocutor as well as in terms of establishing alignment with the voice over headphones. In addition, the type of picture (line drawing vs. tangram shape) independently modulated lexical alignment, such that participants showed more lexical alignment to their interlocutor for (more ambiguous) tangram shapes compared to line drawings. Overall, the results point to a rather large role for non-addressee-centered behavior during lexical alignment. PMID:25762955

  10. Well-pump alignment system

    DOEpatents

    Drumheller, Douglas S.

    1998-01-01

    An improved well-pump for geothermal wells, an alignment system for a well-pump, and to a method for aligning a rotor and stator within a well-pump, wherein the well-pump has a whistle assembly formed at a bottom portion thereof, such that variations in the frequency of the whistle, indicating misalignment, may be monitored during pumping.

  11. On the alignment of quasars

    NASA Astrophysics Data System (ADS)

    Zhu, X.-F.

    1986-06-01

    Taking the two Savage-Bolton 5 deg x 5 deg regions of optical quasar patrol as samples, a systematic analysis of the number of aligned quasars was made and compared with the random data generated by Monte Carlo method. The statistical result is that, at least for these two samples, there is no clear evidence for alignment.

  12. On the alignment of quasars

    NASA Astrophysics Data System (ADS)

    Zhu, Xing-fen

    1986-06-01

    Taking the two Savage-Bolton 5° × 5° regions of optical quasar patrol as samples, I made a systematic analysis of the number of aligned quasars and compared with the random data generated by Monte Carlo method. The statistical result is that, at least for these two samples, there is no clear evidence for alignment.

  13. CATO: The Clone Alignment Tool.

    PubMed

    Henstock, Peter V; LaPan, Peter

    2016-01-01

    High-throughput cloning efforts produce large numbers of sequences that need to be aligned, edited, compared with reference sequences, and organized as files and selected clones. Different pieces of software are typically required to perform each of these tasks. We have designed a single piece of software, CATO, the Clone Alignment Tool, that allows a user to align, evaluate, edit, and select clone sequences based on comparisons to reference sequences. The input and output are designed to be compatible with standard data formats, and thus suitable for integration into a clone processing pipeline. CATO provides both sequence alignment and visualizations to facilitate the analysis of cloning experiments. The alignment algorithm matches each of the relevant candidate sequences against each reference sequence. The visualization portion displays three levels of matching: 1) a top-level summary of the top candidate sequences aligned to each reference sequence, 2) a focused alignment view with the nucleotides of matched sequences displayed against one reference sequence, and 3) a pair-wise alignment of a single reference and candidate sequence pair. Users can select the minimum matching criteria for valid clones, edit or swap reference sequences, and export the results to a summary file as part of the high-throughput cloning workflow. PMID:27459605

  14. CATO: The Clone Alignment Tool

    PubMed Central

    Henstock, Peter V.; LaPan, Peter

    2016-01-01

    High-throughput cloning efforts produce large numbers of sequences that need to be aligned, edited, compared with reference sequences, and organized as files and selected clones. Different pieces of software are typically required to perform each of these tasks. We have designed a single piece of software, CATO, the Clone Alignment Tool, that allows a user to align, evaluate, edit, and select clone sequences based on comparisons to reference sequences. The input and output are designed to be compatible with standard data formats, and thus suitable for integration into a clone processing pipeline. CATO provides both sequence alignment and visualizations to facilitate the analysis of cloning experiments. The alignment algorithm matches each of the relevant candidate sequences against each reference sequence. The visualization portion displays three levels of matching: 1) a top-level summary of the top candidate sequences aligned to each reference sequence, 2) a focused alignment view with the nucleotides of matched sequences displayed against one reference sequence, and 3) a pair-wise alignment of a single reference and candidate sequence pair. Users can select the minimum matching criteria for valid clones, edit or swap reference sequences, and export the results to a summary file as part of the high-throughput cloning workflow. PMID:27459605

  15. Physically motivated global alignment method for electron tomography

    DOE PAGESBeta

    Sanders, Toby; Prange, Micah; Akatay, Cem; Binev, Peter

    2015-04-08

    Electron tomography is widely used for nanoscale determination of 3-D structures in many areas of science. Determining the 3-D structure of a sample from electron tomography involves three major steps: acquisition of sequence of 2-D projection images of the sample with the electron microscope, alignment of the images to a common coordinate system, and 3-D reconstruction and segmentation of the sample from the aligned image data. The resolution of the 3-D reconstruction is directly influenced by the accuracy of the alignment, and therefore, it is crucial to have a robust and dependable alignment method. In this paper, we develop amore » new alignment method which avoids the use of markers and instead traces the computed paths of many identifiable ‘local’ center-of-mass points as the sample is rotated. Compared with traditional correlation schemes, the alignment method presented here is resistant to cumulative error observed from correlation techniques, has very rigorous mathematical justification, and is very robust since many points and paths are used, all of which inevitably improves the quality of the reconstruction and confidence in the scientific results.« less

  16. A two-stage approach to automatic face alignment

    NASA Astrophysics Data System (ADS)

    Wang, Tong; Ai, Haizhou; Huang, Gaofeng

    2003-09-01

    Face alignment is very important in face recognition, modeling and synthesis. Many approaches have been developed for this purpose, such as ASM, AAM, DAM and TC-ASM. After a brief review of all those methods, it is pointed out that these approaches all require a manual initialization to the positions of the landmarks and are very sensitive to it, and despite of all those devoted works the outline of a human face remains a difficult task to be localized precisely. In this paper, a two-stage method to achieve frontal face alignment fully automatically is introduced. The first stage is landmarks' initialization called coarse face alignment. In this stage, after a face is detected by an Adaboost cascade face detector, we use Simple Direct Appearance Model (SDAM) to locate a few key points of human face from the texture according which all the initial landmarks are setup as the coarse alignment. The second stage is fine face alignment that uses a variant of AAM method in which shape variation is predicted from texture reconstruction error together with an embedded ASM refinement for the outline landmarks of the face to achieve the fine alignment. Experiments on a face database of 500 people show that this method is very effective for practical applications.

  17. Physically motivated global alignment method for electron tomography

    SciTech Connect

    Sanders, Toby; Prange, Micah; Akatay, Cem; Binev, Peter

    2015-04-08

    Electron tomography is widely used for nanoscale determination of 3-D structures in many areas of science. Determining the 3-D structure of a sample from electron tomography involves three major steps: acquisition of sequence of 2-D projection images of the sample with the electron microscope, alignment of the images to a common coordinate system, and 3-D reconstruction and segmentation of the sample from the aligned image data. The resolution of the 3-D reconstruction is directly influenced by the accuracy of the alignment, and therefore, it is crucial to have a robust and dependable alignment method. In this paper, we develop a new alignment method which avoids the use of markers and instead traces the computed paths of many identifiable ‘local’ center-of-mass points as the sample is rotated. Compared with traditional correlation schemes, the alignment method presented here is resistant to cumulative error observed from correlation techniques, has very rigorous mathematical justification, and is very robust since many points and paths are used, all of which inevitably improves the quality of the reconstruction and confidence in the scientific results.

  18. Space Mirror Alignment System

    NASA Technical Reports Server (NTRS)

    Jau, Bruno M.; McKinney, Colin; Smythe, Robert F.; Palmer, Dean L.

    2011-01-01

    An optical alignment mirror mechanism (AMM) has been developed with angular positioning accuracy of +/-0.2 arcsec. This requires the mirror s linear positioning actuators to have positioning resolutions of +/-112 nm to enable the mirror to meet the angular tip/tilt accuracy requirement. Demonstrated capabilities are 0.1 arc-sec angular mirror positioning accuracy, which translates into linear positioning resolutions at the actuator of 50 nm. The mechanism consists of a structure with sets of cross-directional flexures that enable the mirror s tip and tilt motion, a mirror with its kinematic mount, and two linear actuators. An actuator comprises a brushless DC motor, a linear ball screw, and a piezoelectric brake that holds the mirror s position while the unit is unpowered. An interferometric linear position sensor senses the actuator s position. The AMMs were developed for an Astrometric Beam Combiner (ABC) optical bench, which is part of an interferometer development. Custom electronics were also developed to accommodate the presence of multiple AMMs within the ABC and provide a compact, all-in-one solution to power and control the AMMs.

  19. Alignment positioning mechanism

    NASA Technical Reports Server (NTRS)

    Fantasia, Peter M. (Inventor)

    1991-01-01

    An alignment positioning mechanism for correcting and compensating for misalignment of structures to be coupled is disclosed. The mechanism comprises a power screw with a base portion and a threaded shank portion. A mounting fixture is provided for rigidly coupling said base portion to the mounting interface of a supporting structure with the axis of the screw perpendicular thereto. A traveling ball nut threaded on the power screw is formed with an external annular arcuate surface configured in the form of a spherical segment and enclosed by a ball nut housing with a conforming arcuate surface for permitting gimballed motion thereon. The ball nut housing is provided with a mounting surface which is positionable in cooperable engagement with the mounting interface of a primary structure to be coupled to the supporting structure. Cooperative means are provided on the ball nut and ball nut housing, respectively, for positioning the ball nut and ball nut housing in relative gimballed position within a predetermined range of relative angular relationship whereby severe structural stresses due to unequal loadings and undesirable bending moments on the mechanism are avoided.

  20. Phase errors and predicted spectral performance of a prototype undulator

    SciTech Connect

    Dejus, R.J.; Vassrman, I.; Moog, E.R.; Gluskin, E.

    1994-08-01

    A prototype undulator has been used to study different magnetic end-configurations and shimming techniques for straightening the beam trajectory. Field distributions obtained by Hall probe measurements were analyzed in terms of trajectory, phase errors, and on-axis brightness for the purpose of correlating predicted spectral intensity with the calculated phase errors. Two device configurations were analyzed. One configuration had a full-strength first magnet at each end and the next-to-last pole was recessed to make the trajectory through the middle of the undulator parallel to the undulator axis. For the second configuration, the first permanent magnet at each end was replaced by a half-strength magnet to reduce the trajectory displacement and the next-to-last pole was adjusted appropriately, and shims were added to straighten the trajectory. Random magnetic field errors can cause trajectory deviations that will affect the optimum angle for viewing the emitted radiation, and care must be taken to select the appropriate angle when calculating the phase errors. This angle may be calculated from the average trajectory angle evaluated at the location of the poles. For the second configuration, we find an rms phase error of less than 3{degrees} and predict 87% of the ideal value of the on-axis brightness for the third harmonic. We have also analyzed the gap dependence of the phase errors and spectral brightness and have found that the rms phase error remain small at all gap settings.

  1. Type I Error Rates and Power Estimates of Selected Parametric and Nonparametric Tests of Scale.

    ERIC Educational Resources Information Center

    Olejnik, Stephen F.; Algina, James

    1987-01-01

    Estimated Type I Error rates and power are reported for the Brown-Forsythe, O'Brien, Klotz, and Siegal-Tukey procedures. The effect of aligning the data using deviations from group means or group medians is investigated. (RB)

  2. A fast cross-validation method for alignment of electron tomography images based on Beer-Lambert law.

    PubMed

    Yan, Rui; Edwards, Thomas J; Pankratz, Logan M; Kuhn, Richard J; Lanman, Jason K; Liu, Jun; Jiang, Wen

    2015-11-01

    In electron tomography, accurate alignment of tilt series is an essential step in attaining high-resolution 3D reconstructions. Nevertheless, quantitative assessment of alignment quality has remained a challenging issue, even though many alignment methods have been reported. Here, we report a fast and accurate method, tomoAlignEval, based on the Beer-Lambert law, for the evaluation of alignment quality. Our method is able to globally estimate the alignment accuracy by measuring the goodness of log-linear relationship of the beam intensity attenuations at different tilt angles. Extensive tests with experimental data demonstrated its robust performance with stained and cryo samples. Our method is not only significantly faster but also more sensitive than measurements of tomogram resolution using Fourier shell correlation method (FSCe/o). From these tests, we also conclude that while current alignment methods are sufficiently accurate for stained samples, inaccurate alignments remain a major limitation for high resolution cryo-electron tomography. PMID:26455556

  3. Alignment-Annotator web server: rendering and annotating sequence alignments

    PubMed Central

    Gille, Christoph; Fähling, Michael; Weyand, Birgit; Wieland, Thomas; Gille, Andreas

    2014-01-01

    Alignment-Annotator is a novel web service designed to generate interactive views of annotated nucleotide and amino acid sequence alignments (i) de novo and (ii) embedded in other software. All computations are performed at server side. Interactivity is implemented in HTML5, a language native to web browsers. The alignment is initially displayed using default settings and can be modified with the graphical user interfaces. For example, individual sequences can be reordered or deleted using drag and drop, amino acid color code schemes can be applied and annotations can be added. Annotations can be made manually or imported (BioDAS servers, the UniProt, the Catalytic Site Atlas and the PDB). Some edits take immediate effect while others require server interaction and may take a few seconds to execute. The final alignment document can be downloaded as a zip-archive containing the HTML files. Because of the use of HTML the resulting interactive alignment can be viewed on any platform including Windows, Mac OS X, Linux, Android and iOS in any standard web browser. Importantly, no plugins nor Java are required and therefore Alignment-Anotator represents the first interactive browser-based alignment visualization. Availability: http://www.bioinformatics.org/strap/aa/ and http://strap.charite.de/aa/. PMID:24813445

  4. Multiple sequence alignment: a major challenge to large-scale phylogenetics

    PubMed Central

    Liu, Kevin; Linder, C. Randal; Warnow, Tandy

    2011-01-01

    Over the last decade, dramatic advances have been made in developing methods for large-scale phylogeny estimation, so that it is now feasible for investigators with moderate computational resources to obtain reasonable solutions to maximum likelihood and maximum parsimony, even for datasets with a few thousand sequences. There has also been progress on developing methods for multiple sequence alignment, so that greater alignment accuracy (and subsequent improvement in phylogenetic accuracy) is now possible through automated methods. However, these methods have not been tested under conditions that reflect properties of datasets confronted by large-scale phylogenetic estimation projects. In this paper we report on a study that compares several alignment methods on a benchmark collection of nucleotide sequence datasets of up to 78,132 sequences. We show that as the number of sequences increases, the number of alignment methods that can analyze the datasets decreases. Furthermore, the most accurate alignment methods are unable to analyze the very largest datasets we studied, so that only moderately accurate alignment methods can be used on the largest datasets. As a result, alignments computed for large datasets have relatively large error rates, and maximum likelihood phylogenies computed on these alignments also have high error rates. Therefore, the estimation of highly accurate multiple sequence alignments is a major challenge for Tree of Life projects, and more generally for large-scale systematics studies. PMID:21113338

  5. Orientation Errors in Paleomagnetic Core Samples and Their Effects

    NASA Astrophysics Data System (ADS)

    Kono, M.

    2011-12-01

    In paleomagnetic studies, samples are often obtained as cylindrical cores by the use of engine drills. Two angles measured for the core in the field (the angle P between cylindrical axis and the horizontal plane, and the angle A between a horizontal direction in the core and the true north) are needed to describe the direction of magnetic remanence in geographic coordinates. These angles can be measured with an error of about 1 degree or less. The error in paleomagnetic directions are usually given by Fisher's semi-angle of 95% confidence (α 95), which is typically a few to ten degrees. It appears therefore that the orientation errors are negligibly small. However, this it not quite correct. There is no problem about the measurement of P, but the angle in the horizontal plane (A) is often measured by a magnetic compass, which is a source of large errors. In particular, large local magnetic anomalies often accompany volcanic rock terrain because of their strong magnetization. This effect is known quite a long time, but quantitative estimate of orientation errors is not available yet. We have obtained quite a large number of data (182 lavas, 903 samples) from Lundarhals area of Iceland. For more than 200 samples of these, three independent horizontal angles have been measured to estimate A; one by sun's direction, the second by reference to some landmark, and the third is by magnetic direction. Among the rest of samples, more than 600 have reference and magnetic directions. Only 30 samples are determined by magnetic compass alone. From a detailed analysis of these data, the following conclusions were obtained. (1) The difference between sun and reference azimuths are 0.0±0.6~circ (the mean and standard deviation in degrees, for n=203). This is small enough and can be ignored compared to other errors. Consequently, if either of these angles are available, we have almost error-free data for A. (2) The differences between the sun and magnetic azimuths are 0.5±7.8o (n

  6. Note: O-ring stack system for electron gun alignment.

    PubMed

    Park, In-Yong; Cho, Boklae; Han, Cheolsu; Shin, Seungmin; Lee, Dongjun; Ahn, Sang Jung

    2015-01-01

    We present a reliable method for aligning an electron gun which consists of an electron source and lenses by controlling a stack of rubber O-rings in a vacuum condition. The beam direction angle is precisely tilted along two axes by adjusting the height difference of a stack of O-rings. In addition, the source position is shifted in each of three orthogonal directions. We show that the tilting angle and linear shift along the x and y axes as obtained from ten stacked O-rings are ±2.55° and ±2 mm, respectively. This study can easily be adapted to charged particle gun alignment and adjustments of the flange position in a vacuum, ensuring that its results can be useful with regard to electrical insulation between flanges with slight modifications. PMID:25638137

  7. Note: O-ring stack system for electron gun alignment

    NASA Astrophysics Data System (ADS)

    Park, In-Yong; Cho, Boklae; Han, Cheolsu; Shin, Seungmin; Lee, Dongjun; Ahn, Sang Jung

    2015-01-01

    We present a reliable method for aligning an electron gun which consists of an electron source and lenses by controlling a stack of rubber O-rings in a vacuum condition. The beam direction angle is precisely tilted along two axes by adjusting the height difference of a stack of O-rings. In addition, the source position is shifted in each of three orthogonal directions. We show that the tilting angle and linear shift along the x and y axes as obtained from ten stacked O-rings are ±2.55° and ±2 mm, respectively. This study can easily be adapted to charged particle gun alignment and adjustments of the flange position in a vacuum, ensuring that its results can be useful with regard to electrical insulation between flanges with slight modifications.

  8. Note: O-ring stack system for electron gun alignment

    SciTech Connect

    Park, In-Yong; Cho, Boklae; Han, Cheolsu; Shin, Seungmin; Lee, Dongjun; Ahn, Sang Jung

    2015-01-15

    We present a reliable method for aligning an electron gun which consists of an electron source and lenses by controlling a stack of rubber O-rings in a vacuum condition. The beam direction angle is precisely tilted along two axes by adjusting the height difference of a stack of O-rings. In addition, the source position is shifted in each of three orthogonal directions. We show that the tilting angle and linear shift along the x and y axes as obtained from ten stacked O-rings are ±2.55° and ±2 mm, respectively. This study can easily be adapted to charged particle gun alignment and adjustments of the flange position in a vacuum, ensuring that its results can be useful with regard to electrical insulation between flanges with slight modifications.

  9. Optimizing parameters on alignment of PCL/PGA nanofibrous scaffold: An artificial neural networks approach.

    PubMed

    Paskiabi, Farnoush Asghari; Mirzaei, Esmaeil; Amani, Amir; Shokrgozar, Mohammad Ali; Saber, Reza; Faridi-Majidi, Reza

    2015-11-01

    This paper proposes an artificial neural networks approach to finding the effects of electrospinning parameters on alignment of poly(ɛ-caprolactone)/poly(glycolic acid) blend nanofibers. Four electrospinning parameters, namely total polymer concentration, working distance, drum speed and applied voltage were considered as input and the standard deviation of the angles of nanofibers, introducing fibers alignments, as the output of the model. The results demonstrated that drum speed and applied voltage are two critical factors influencing nanofibers alignment, however their effect are entirely interdependent. Their effects also are not independent of other electrospinning parameters. In obtaining aligned electrospun nanofibers, the concentration and working distance can also be effective. In vitro cell culture study on random and aligned nanofibers showed directional growth of cells on aligned fibers. PMID:25450538

  10. Casting and Angling.

    ERIC Educational Resources Information Center

    Little, Mildred J.; Bunting, Camille

    The self-contained packet contains background information, lesson plans, 15 transparency and student handout masters, drills and games, 2 objective examinations, and references for teaching a 15-day unit on casting and angling to junior high and senior high school students, either as part of a regular physical education program or as a club…

  11. The Rainbow Angle.

    ERIC Educational Resources Information Center

    Sims, B.

    1978-01-01

    Two articles in the "Scientific American" form the background of this note. The rainbow angle for the primary bow of a monochromatic Cartesian rainbow is calculated. Special projects for senior high school students could be patterned after this quantitative study. (MP)

  12. An Iterative Angle Trisection

    ERIC Educational Resources Information Center

    Muench, Donald L.

    2007-01-01

    The problem of angle trisection continues to fascinate people even though it has long been known that it can't be done with straightedge and compass alone. However, for practical purposes, a good iterative procedure can get you as close as you want. In this note, we present such a procedure. Using only straightedge and compass, our procedure…

  13. Yaw Angle Demonstration

    NASA Technical Reports Server (NTRS)

    1994-01-01

    The Large Angle Magnetic Suspension Test Fixture (LAMSTF) is a 5 degree-of -freedom repulsive force magnetic suspension system designed to study the control of objects over large magnetic gaps. A digital control algorithm uses 6 sets of laser-sheet sensors and 5 control coils to position a cylinder 3' above the plane of electromagnetics

  14. Casting and Angling.

    ERIC Educational Resources Information Center

    Smith, Julian W.

    As part of a series of books and pamphlets on outdoor education, this manual consists of easy-to-follow instructions for fishing activities dealing with casting and angling. The manual may be used as a part of the regular physical education program in schools and colleges or as a club activity for the accomplished weekend fisherman or the…

  15. Nanoparticle-doped polyimide for controlling the pretilt angle of liquid crystals devices.

    PubMed

    Hwang, Shug-June; Jeng, Shie-Chang; Hsieh, I-Ming

    2010-08-01

    The pretilt angles of liquid crystal molecules can be controlled by using conventional polyimide (PI) alignment material doped with different concentrations of Polyhedral Oligomeric Silsequioxanes (POSS) nanoparticles, which have been observed to spontaneously induce vertical alignment. The addition of POSS in the homogenous PI changes the surface energy of the alignment layer and generates a variable pretilt angle. Experimental results demonstrate that the pretilt angle thetap is a function of the POSS concentration, and can be tuned continuously over the range of 0 degrees alignment layer is almost constant regardless of the POSS concentration. This technique is very simple and is compatible with methods familiar in the current LCD industry. PMID:20721039

  16. Everyday Scale Errors

    ERIC Educational Resources Information Center

    Ware, Elizabeth A.; Uttal, David H.; DeLoache, Judy S.

    2010-01-01

    Young children occasionally make "scale errors"--they attempt to fit their bodies into extremely small objects or attempt to fit a larger object into another, tiny, object. For example, a child might try to sit in a dollhouse-sized chair or try to stuff a large doll into it. Scale error research was originally motivated by parents' and…

  17. Medical error and disclosure.

    PubMed

    White, Andrew A; Gallagher, Thomas H

    2013-01-01

    Errors occur commonly in healthcare and can cause significant harm to patients. Most errors arise from a combination of individual, system, and communication failures. Neurologists may be involved in harmful errors in any practice setting and should familiarize themselves with tools to prevent, report, and examine errors. Although physicians, patients, and ethicists endorse candid disclosure of harmful medical errors to patients, many physicians express uncertainty about how to approach these conversations. A growing body of research indicates physicians often fail to meet patient expectations for timely and open disclosure. Patients desire information about the error, an apology, and a plan for preventing recurrence of the error. To meet these expectations, physicians should participate in event investigations and plan thoroughly for each disclosure conversation, preferably with a disclosure coach. Physicians should also anticipate and attend to the ongoing medical and emotional needs of the patient. A cultural change towards greater transparency following medical errors is in motion. Substantial progress is still required, but neurologists can further this movement by promoting policies and environments conducive to open reporting, respectful disclosure to patients, and support for the healthcare workers involved. PMID:24182370

  18. Bedform alignment in directionally varying flows

    USGS Publications Warehouse

    Rubin, D.M.; Hunter, R.E.

    1987-01-01

    Many kinds of sediment bedforms are presumed to trend either normal or parallel to the direction of sediment transport. For this reason, the trend of bedforms observed by remote sensing or by field observations is commonly used as an indicator of the direction of sediment transport. Such presumptions regarding bedform trend were tested experimentally in bidirectional flows by rotating a sand-covered board in steady winds. Transverse, oblique, and longitudinal bedforms were created by changing only two parameters: the angle between the two winds and the proportions of sand transported in the two directions. Regardless of whether the experimental bedforms were transverse, oblique, or longitudinal (as defined by the bedform trend relative to the resultant transport direction), they all had trends that yielded the maximum gross transport across the bedforms. The fact that many of the experimental bedforms were neither transverse nor parallel to the resultant transport direction suggests that transport directions cannot be accurately determined by presuming such alignment.

  19. Runout error correction in tomographic reconstruction by intensity summation method.

    PubMed

    Kwon, Ik Hwan; Lim, Jun; Hong, Chung Ki

    2016-09-01

    An alignment method for correction of the axial and radial runout errors of the rotation stage in X-ray phase-contrast computed tomography has been developed. Only intensity information was used, without extra hardware or complicated calculation. Notably, the method, as demonstrated herein, can utilize the halo artifact to determine displacement. PMID:27577781

  20. High-harmonic generation in aligned water molecules

    NASA Astrophysics Data System (ADS)

    Wang, Song; Devin, Julien; Hoffmann, Matthias; Cryan, James; Kaldun, Andreas; Bucksbaum, Philip

    2016-05-01

    In recent years, the use of high harmonic generation (HHG) in aligned molecular vapors has become a powerful tool to study ultrafast dynamics of electronic and nuclear wave packets. In our new experimental setup, we are able to orient H2 O and D2 O molecules using a single cycle terahertz (THz) pulse. Aligning water is especially interesting as the highest occupied molecular orbital (HOMO) of water contains a node in the xz plane of the molecular frame, allowing us to perform HHG from second highest occupied molecular orbital (HOMO-1) only, by setting the polarization of the fundamental laser along the z-axis of the aligned water molecules. We are particularly interested in the HOMO-1 state, as there is fast motion of the H-O-H angle leading to sub-wavelength dynamics. On this poster we present our all-optical alignment setup where HHG and single-cycle THz generation take place in high-vacuum, where measurements with arbitrary polarization angles between the two are possible. In addition, we discuss the effects of the molecular orientation on HHG, including symmetry breaking that could produce even harmonics and isotope effects between H2 O and D2 O due to different vibrational energies. This work was supported by the U.S. Department of Energy, Office of Science, Basic Energy Sciences, Chemical Sciences, Geosciences, and Biosciences Division.

  1. Advanced Mask Aligner Lithography (AMALITH)

    NASA Astrophysics Data System (ADS)

    Voelkel, Reinhard; Vogler, Uwe; Bramati, Arianna

    2015-03-01

    Mask aligner lithography is very attractive for less-critical lithography layers and is widely used for LED, display, CMOS image sensor, micro-fluidics and MEMS manufacturing. Mask aligner lithography is also a preferred choice the semiconductor back-end for 3D-IC, TSV interconnects, advanced packaging (AdP) and wafer-level-packaging (WLP). Mask aligner lithography is a mature technique based on shadow printing and has not much changed since the 1980s. In shadow printing lithography a geometric pattern is transferred by free-space propagation from a photomask to a photosensitive layer on a wafer. The inherent simplicity of the pattern transfer offers ease of operation, low maintenance, moderate capital expenditure, high wafers-per-hour (WPH) throughput, and attractive cost-of-ownership (COO). Advanced mask aligner lithography (AMALITH) comprises different measures to improve shadow printing lithography beyond current limits. The key enabling technology for AMALITH is a novel light integrator systems, referred to as MO Exposure Optics® (MOEO). MOEO allows to fully control and shape the properties of the illumination light in a mask aligner. Full control is the base for accurate simulation and optimization of the shadow printing process (computational lithography). Now photolithography enhancement techniques like customized illumination, optical proximity correction (OPC), phase masks (AAPSM), half-tone lithography and Talbot lithography could be used in mask aligner lithography. We summarize the recent progress in advanced mask aligner lithography (AMALITH) and discuss possible measures to further improve shadow printing lithography.

  2. Keeping speed and distance for aligned motion

    NASA Astrophysics Data System (ADS)

    Farkas, Illés J.; Kun, Jeromos; Jin, Yi; He, Gaoqi; Xu, Mingliang

    2015-01-01

    The cohesive collective motion (flocking, swarming) of autonomous agents is ubiquitously observed and exploited in both natural and man-made settings, thus, minimal models for its description are essential. In a model with continuous space and time we find that if two particles arrive symmetrically in a plane at a large angle, then (i) radial repulsion and (ii) linear self-propelling toward a fixed preferred speed are sufficient for them to depart at a smaller angle. For this local gain of momentum explicit velocity alignment is not necessary, nor are adhesion or attraction, inelasticity or anisotropy of the particles, or nonlinear drag. With many particles obeying these microscopic rules of motion we find that their spatial confinement to a square with periodic boundaries (which is an indirect form of attraction) leads to stable macroscopic ordering. As a function of the strength of added noise we see—at finite system sizes—a critical slowing down close to the order-disorder boundary and a discontinuous transition. After varying the density of particles at constant system size and varying the size of the system with constant particle density we predict that in the infinite system size (or density) limit the hysteresis loop disappears and the transition becomes continuous. We note that animals, humans, drones, etc., tend to move asynchronously and are often more responsive to motion than positions. Thus, for them velocity-based continuous models can provide higher precision than coordinate-based models. An additional characteristic and realistic feature of the model is that convergence to the ordered state is fastest at a finite density, which is in contrast to models applying (discontinuous) explicit velocity alignments and discretized time. To summarize, we find that the investigated model can provide a minimal description of flocking.

  3. Keeping speed and distance for aligned motion.

    PubMed

    Farkas, Illés J; Kun, Jeromos; Jin, Yi; He, Gaoqi; Xu, Mingliang

    2015-01-01

    The cohesive collective motion (flocking, swarming) of autonomous agents is ubiquitously observed and exploited in both natural and man-made settings, thus, minimal models for its description are essential. In a model with continuous space and time we find that if two particles arrive symmetrically in a plane at a large angle, then (i) radial repulsion and (ii) linear self-propelling toward a fixed preferred speed are sufficient for them to depart at a smaller angle. For this local gain of momentum explicit velocity alignment is not necessary, nor are adhesion or attraction, inelasticity or anisotropy of the particles, or nonlinear drag. With many particles obeying these microscopic rules of motion we find that their spatial confinement to a square with periodic boundaries (which is an indirect form of attraction) leads to stable macroscopic ordering. As a function of the strength of added noise we see--at finite system sizes--a critical slowing down close to the order-disorder boundary and a discontinuous transition. After varying the density of particles at constant system size and varying the size of the system with constant particle density we predict that in the infinite system size (or density) limit the hysteresis loop disappears and the transition becomes continuous. We note that animals, humans, drones, etc., tend to move asynchronously and are often more responsive to motion than positions. Thus, for them velocity-based continuous models can provide higher precision than coordinate-based models. An additional characteristic and realistic feature of the model is that convergence to the ordered state is fastest at a finite density, which is in contrast to models applying (discontinuous) explicit velocity alignments and discretized time. To summarize, we find that the investigated model can provide a minimal description of flocking. PMID:25679657

  4. In-flight alignment using H ∞ filter for strapdown INS on aircraft.

    PubMed

    Pei, Fu-Jun; Liu, Xuan; Zhu, Li

    2014-01-01

    In-flight alignment is an effective way to improve the accuracy and speed of initial alignment for strapdown inertial navigation system (INS). During the aircraft flight, strapdown INS alignment was disturbed by lineal and angular movements of the aircraft. To deal with the disturbances in dynamic initial alignment, a novel alignment method for SINS is investigated in this paper. In this method, an initial alignment error model of SINS in the inertial frame is established. The observability of the system is discussed by piece-wise constant system (PWCS) theory and observable degree is computed by the singular value decomposition (SVD) theory. It is demonstrated that the system is completely observable, and all the system state parameters can be estimated by optimal filter. Then a H ∞ filter was designed to resolve the uncertainty of measurement noise. The simulation results demonstrate that the proposed algorithm can reach a better accuracy under the dynamic disturbance condition. PMID:24511300

  5. In-Flight Alignment Using H∞ Filter for Strapdown INS on Aircraft

    PubMed Central

    Pei, Fu-Jun; Liu, Xuan; Zhu, Li

    2014-01-01

    In-flight alignment is an effective way to improve the accuracy and speed of initial alignment for strapdown inertial navigation system (INS). During the aircraft flight, strapdown INS alignment was disturbed by lineal and angular movements of the aircraft. To deal with the disturbances in dynamic initial alignment, a novel alignment method for SINS is investigated in this paper. In this method, an initial alignment error model of SINS in the inertial frame is established. The observability of the system is discussed by piece-wise constant system (PWCS) theory and observable degree is computed by the singular value decomposition (SVD) theory. It is demonstrated that the system is completely observable, and all the system state parameters can be estimated by optimal filter. Then a H∞ filter was designed to resolve the uncertainty of measurement noise. The simulation results demonstrate that the proposed algorithm can reach a better accuracy under the dynamic disturbance condition. PMID:24511300

  6. Aligning for Innovation - Alignment Strategy to Drive Innovation

    NASA Technical Reports Server (NTRS)

    Johnson, Hurel; Teltschik, David; Bussey, Horace, Jr.; Moy, James

    2010-01-01

    With the sudden need for innovation that will help the country achieve its long-term space exploration objectives, the question of whether NASA is aligned effectively to drive the innovation that it so desperately needs to take space exploration to the next level should be entertained. Authors such as Robert Kaplan and David North have noted that companies that use a formal system for implementing strategy consistently outperform their peers. They have outlined a six-stage management systems model for implementing strategy, which includes the aligning of the organization towards its objectives. This involves the alignment of the organization from the top down. This presentation will explore the impacts of existing U.S. industrial policy on technological innovation; assess the current NASA organizational alignment and its impacts on driving technological innovation; and finally suggest an alternative approach that may drive the innovation needed to take the world to the next level of space exploration, with NASA truly leading the way.

  7. Rigorous electromagnetic simulation applied to alignment systems

    NASA Astrophysics Data System (ADS)

    Deng, Yunfei; Pistor, Thomas V.; Neureuther, Andrew R.

    2001-09-01

    Rigorous electromagnetic simulation with TEMPEST is used to provide benchmark data and understanding of key parameters in the design of topographical features of alignment marks. Periodic large silicon trenches are analyzed as a function of wavelength (530-800 nm), duty cycle, depth, slope and angle of incidence. The signals are well behaved except when the trench width becomes about 1 micrometers or smaller. Segmentation of the trenches to form 3D marks shows that a segmentation period of 2-5 wavelengths makes the diffraction in the (1,1) direction about 1/3 to 1/2 of that in the main first order (1,0). Transmission alignment marks nanoimprint lithography using the difference between the +1 and -1 reflected orders showed a sensitivity of the difference signal to misalignment of 0.7%/nm for rigorous simulation and 0.5%/nm for simple ray-tracing. The sensitivity to a slanted substrate indentation was 10 nm off-set per degree of tilt from horizontal.

  8. Fusion bonding and alignment fixture

    DOEpatents

    Ackler, Harold D.; Swierkowski, Stefan P.; Tarte, Lisa A.; Hicks, Randall K.

    2000-01-01

    An improved vacuum fusion bonding structure and process for aligned bonding of large area glass plates, patterned with microchannels and access holes and slots, for elevated glass fusion temperatures. Vacuum pumpout of all the components is through the bottom platform which yields an untouched, defect free top surface which greatly improves optical access through this smooth surface. Also, a completely non-adherent interlayer, such as graphite, with alignment and location features is located between the main steel platform and the glass plate pair, which makes large improvements in quality, yield, and ease of use, and enables aligned bonding of very large glass structures.

  9. Adaptive control of molecular alignment

    SciTech Connect

    Horn, C.; Wollenhaupt, M.; Krug, M.; Baumert, T.; Nalda, R. de; Banares, L.

    2006-03-15

    We demonstrate control on nonadiabatic molecular alignment by using a spectrally phase-shaped laser pulse. An evolutionary algorithm in a closed feedback loop has been used in order to find pulse shapes that maximize a given effect. In particular, this scheme has been applied to the optimization of total alignment, and to the control of the temporal structure of the alignment transient within a revival. Asymmetric temporal pulse shapes have been found to be very effective for the latter and have been studied separately in a single-parameter control scheme. Our experimental results are supported by numerical simulations.

  10. Mathematical analysis of errors resulting from choice of reference frame coordinates in measuring human joint motion

    SciTech Connect

    Hollerbach, K.; Hollister, A.

    1995-02-01

    Measurements of human joint motion frequently involve the use of opto-electronic and other motion analysis systems where some type of makers are used to establish joint motion within a global reference coordinate frame. Typically, this global reference coordinate frame is chosen to be most convenient for the person carrying out the experiment in which the joint motion is measured, and Euler angles are chosen as the measure of joint motion. Results, however, may be quite arbitrary and therefore rendered meaningless if the reference frame is not properly chosen with respect to the physical joint axis. In order to make a proper choice of coordinate axes in the reference frame, one must take into consideration both the location and the orientation of die physical joint axis relative to the reference frame`s axes. In nature, joint axes can exist at any orientation and location relative to an arbitrarily chosen global reference frame. An axis that is not properly aligned with the global reference frame is therefore called an arbitrary axis. We demonstrate that errors result when measurements and calculations are made in a global reference frame that is arbitrarily placed and oriented, with little regard for the physical axis. Slight offsets of global reference frame produce significant errors in recording rotations about the joint axis. We conclude that, in order to be able to reach valid conclusions from joint motion measurements, the reference frame with respect to which all are taken must be brought to the physical axis; furthermore, one of the reference axes must be aligned with the physical axis. Any other choice of reference axes will result in misleading an often erroneous results.

  11. A robust, automated alignment concept for robotics

    SciTech Connect

    Everett, L.J.; Redfield, R.C. . Dept. of Mechanical Engineering)

    1994-08-01

    A video-based pose sensor is presented that overcomes some of the common problems with typical robotic pose sensors. The Targeting and Reflective Alignment Concept (TRAC) sensor operates using the optics of reflection. TRAC is a robust sensor capable of both continuous and discrete pose sensing in the presence of a class of disturbance inputs (extraneous lighting). Key features of the sensor are its high sensitivity to orientation error, its decoupled handling of orientation and translation (without calibration transformations), and its ability to provide intuitive feedback to a human operator for tele-operation. The sensor has been shown successful at target tracking with a PUMA manipulator in the laboratory and in automatic positioning of NASA-JSC's Manipulator Development Facility (MDF) telemanipulator arm used for shuttle astronaut training.

  12. A Different Angle on Perspective

    ERIC Educational Resources Information Center

    Frantz, Marc

    2012-01-01

    When a plane figure is photographed from different viewpoints, lengths and angles appear distorted. Hence it is often assumed that lengths, angles, protractors, and compasses have no place in projective geometry. Here we describe a sense in which certain angles are preserved by projective transformations. These angles can be constructed with…

  13. Uncorrected refractive errors

    PubMed Central

    Naidoo, Kovin S; Jaggernath, Jyoti

    2012-01-01

    Global estimates indicate that more than 2.3 billion people in the world suffer from poor vision due to refractive error; of which 670 million people are considered visually impaired because they do not have access to corrective treatment. Refractive errors, if uncorrected, results in an impaired quality of life for millions of people worldwide, irrespective of their age, sex and ethnicity. Over the past decade, a series of studies using a survey methodology, referred to as Refractive Error Study in Children (RESC), were performed in populations with different ethnic origins and cultural settings. These studies confirmed that the prevalence of uncorrected refractive errors is considerably high for children in low-and-middle-income countries. Furthermore, uncorrected refractive error has been noted to have extensive social and economic impacts, such as limiting educational and employment opportunities of economically active persons, healthy individuals and communities. The key public health challenges presented by uncorrected refractive errors, the leading cause of vision impairment across the world, require urgent attention. To address these issues, it is critical to focus on the development of human resources and sustainable methods of service delivery. This paper discusses three core pillars to addressing the challenges posed by uncorrected refractive errors: Human Resource (HR) Development, Service Development and Social Entrepreneurship. PMID:22944755

  14. Uncorrected refractive errors.

    PubMed

    Naidoo, Kovin S; Jaggernath, Jyoti

    2012-01-01

    Global estimates indicate that more than 2.3 billion people in the world suffer from poor vision due to refractive error; of which 670 million people are considered visually impaired because they do not have access to corrective treatment. Refractive errors, if uncorrected, results in an impaired quality of life for millions of people worldwide, irrespective of their age, sex and ethnicity. Over the past decade, a series of studies using a survey methodology, referred to as Refractive Error Study in Children (RESC), were performed in populations with different ethnic origins and cultural settings. These studies confirmed that the prevalence of uncorrected refractive errors is considerably high for children in low-and-middle-income countries. Furthermore, uncorrected refractive error has been noted to have extensive social and economic impacts, such as limiting educational and employment opportunities of economically active persons, healthy individuals and communities. The key public health challenges presented by uncorrected refractive errors, the leading cause of vision impairment across the world, require urgent attention. To address these issues, it is critical to focus on the development of human resources and sustainable methods of service delivery. This paper discusses three core pillars to addressing the challenges posed by uncorrected refractive errors: Human Resource (HR) Development, Service Development and Social Entrepreneurship. PMID:22944755

  15. Quadrupole Beam-Based Alignment in the RHIC Interaction Regions

    SciTech Connect

    T. Satogata, J. Ziegler

    2011-03-01

    Continued beam-based alignment (BBA) efforts have provided significant benefit to both heavy ion and polarized proton operations at RHIC. Recent studies demonstrated previously unknown systematic beam position monitor (BPM) offset errors and produced accurate measurements of individual BPM offsets in the experiment interaction regions. Here we describe the algorithm used to collect and analyze data during the 2010 and early 2011 RHIC runs and the results of these measurements.

  16. LSST Telescope Alignment Plan Based on Nodal Aberration Theory

    NASA Astrophysics Data System (ADS)

    Sebag, J.; Gressler, W.; Schmid, T.; Rolland, J. P.; Thompson, K. P.

    2012-04-01

    The optical alignment of the Large Synoptic Survey Telescope (LSST) is potentially challenging, due to its fast three-mirror optical design and its large 3.5° field of view (FOV). It is highly advantageous to align the three-mirror optical system prior to the integration of the complex science camera on the telescope, which corrects the FOV via three refractive elements and includes the operational wavefront sensors. A telescope alignment method based on nodal aberration theory (NAT) is presented here to address this challenge. Without the science camera installed on the telescope, the on-axis imaging performance of the telescope is diffraction-limited, but the field of view is not corrected. The nodal properties of the three-mirror telescope design have been analyzed and an alignment approach has been developed using the intrinsically linear nodal behavior, which is linked via sensitivities to the misalignment parameters. Since mirror figure errors will exist in any real application, a methodology to introduce primary-mirror figure errors into the analysis has been developed and is also presented.

  17. Laser beam alignment apparatus and method

    DOEpatents

    Gruhn, Charles R.; Hammond, Robert B.

    1981-01-01

    The disclosure relates to an apparatus and method for laser beam alignment. Thermoelectric properties of a disc in a laser beam path are used to provide an indication of beam alignment and/or automatic laser alignment.

  18. Laser beam alignment apparatus and method

    DOEpatents

    Gruhn, C.R.; Hammond, R.B.

    The disclosure related to an apparatus and method for laser beam alignment. Thermoelectric properties of a disc in a laser beam path are used to provide an indication of beam alignment and/or automatic laser alignment.

  19. Theory of grain alignment in molecular clouds

    NASA Technical Reports Server (NTRS)

    Roberge, Wayne G.

    1993-01-01

    Research accomplishments are presented and include the following: (1) mathematical theory of grain alignment; (2) super-paramagnetic alignment of molecular cloud grains; and (3) theory of grain alignment by ambipolar diffusion.

  20. Protein structure alignment beyond spatial proximity

    PubMed Central

    Wang, Sheng; Ma, Jianzhu; Peng, Jian; Xu, Jinbo

    2013-01-01

    Protein structure alignment is a fundamental problem in computational structure biology. Many programs have been developed for automatic protein structure alignment, but most of them align two protein structures purely based upon geometric similarity without considering evolutionary and functional relationship. As such, these programs may generate structure alignments which are not very biologically meaningful from the evolutionary perspective. This paper presents a novel method DeepAlign for automatic pairwise protein structure alignment. DeepAlign aligns two protein structures using not only spatial proximity of equivalent residues (after rigid-body superposition), but also evolutionary relationship and hydrogen-bonding similarity. Experimental results show that DeepAlign can generate structure alignments much more consistent with manually-curated alignments than other automatic tools especially when proteins under consideration are remote homologs. These results imply that in addition to geometric similarity, evolutionary information and hydrogen-bonding similarity are essential to aligning two protein structures. PMID:23486213

  1. Optical alignment of Centaur's inertial guidance system

    NASA Technical Reports Server (NTRS)

    Gordan, Andrew L.

    1987-01-01

    During Centaur launch operations the launch azimuth of the inertial platform's U-accelerometer input axis must be accurately established and maintained. This is accomplished by using an optically closed loop system with a long-range autotheodolite whose line of sight was established by a first-order survey. A collimated light beam from the autotheodolite intercepts a reflecting Porro prism mounted on the platform azimuth gimbal. Thus, any deviation of the Porro prism from its predetermined heading is optically detected by the autotheodolite. The error signal produced is used to torque the azimuth gimbal back to its required launch azimuth. The heading of the U-accelerometer input axis is therefore maintained automatically. Previously, the autotheodolite system could not distinguish between vehicle sway and rotational motion of the inertial platform unless at least three prisms were used. One prism was mounted on the inertial platform to maintain azimuth alignment, and two prisms were mounted externally on the vehicle to track sway. For example, the automatic azimuth-laying theodolite (AALT-SV-M2) on the Saturn vehilce used three prisms. The results of testing and modifying the AALT-SV-M2 autotheodolite to simultaneously monitor and maintain alignment of the inertial platform and track the sway of the vehicle from a single Porro prism.

  2. Insulin use: preventable errors.

    PubMed

    2014-01-01

    Insulin is vital for patients with type 1 diabetes and useful for certain patients with type 2 diabetes. The serious consequences of insulin-related medication errors are overdose, resulting in severe hypoglycaemia, causing seizures, coma and even death; or underdose, resulting in hyperglycaemia and sometimes ketoacidosis. Errors associated with the preparation and administration of insulin are often reported, both outside and inside the hospital setting. These errors are preventable. By analysing reports from organisations devoted to medication error prevention and from poison control centres, as well as a few studies and detailed case reports of medication errors, various types of error associated with insulin use have been identified, especially in the hospital setting. Generally, patients know more about the practicalities of their insulin treatment than healthcare professionals with intermittent involvement. Medication errors involving insulin can occur at each step of the medication-use process: prescribing, data entry, preparation, dispensing and administration. When prescribing insulin, wrong-dose errors have been caused by the use of abbreviations, especially "U" instead of the word "units" (often resulting in a 10-fold overdose because the "U" is read as a zero), or by failing to write the drug's name correctly or in full. In electronic prescribing, the sheer number of insulin products is a source of confusion and, ultimately, wrong-dose errors, and often overdose. Prescribing, dispensing or administration software is rarely compatible with insulin prescriptions in which the dose is adjusted on the basis of the patient's subsequent capillary blood glucose readings, and can therefore generate errors. When preparing and dispensing insulin, a tuberculin syringe is sometimes used instead of an insulin syringe, leading to overdose. Other errors arise from confusion created by similar packaging, between different insulin products or between insulin and other

  3. Error Prevention Aid

    NASA Technical Reports Server (NTRS)

    1987-01-01

    In a complex computer environment there is ample opportunity for error, a mistake by a programmer, or a software-induced undesirable side effect. In insurance, errors can cost a company heavily, so protection against inadvertent change is a must for the efficient firm. The data processing center at Transport Life Insurance Company has taken a step to guard against accidental changes by adopting a software package called EQNINT (Equations Interpreter Program). EQNINT cross checks the basic formulas in a program against the formulas that make up the major production system. EQNINT assures that formulas are coded correctly and helps catch errors before they affect the customer service or its profitability.

  4. Angles in the Sky?

    NASA Astrophysics Data System (ADS)

    Behr, Bradford

    2005-09-01

    Tycho Brahe lived and worked in the late 1500s before the telescope was invented. He made highly accurate observations of the positions of planets, stars, and comets using large angle-measuring devices of his own design. You can use his techniques to observe the sky as well. For example, the degree, a common unit of measurement in astronomy, can be measured by holding your fist at arm's length up to the sky. Open your fist and observe the distance across the sky covered by the width of your pinky fingernail. That is, roughly, a degree! After some practice, and knowing that one degree equals four minutes, you can measure elapsed time by measuring the angle of the distance that the Moon appears to have moved and multiplying that number by four. You can also figure distances and sizes of things. These are not precise measurements, but rough estimates that can give you a "close-enough" answer.

  5. CORRELATED ERRORS IN EARTH POINTING MISSIONS

    NASA Technical Reports Server (NTRS)

    Bilanow, Steve; Patt, Frederick S.

    2005-01-01

    Two different Earth-pointing missions dealing with attitude control and dynamics changes illustrate concerns with correlated error sources and coupled effects that can occur. On the OrbView-2 (OV-2) spacecraft, the assumption of a nearly-inertially-fixed momentum axis was called into question when a residual dipole bias apparently changed magnitude. The possibility that alignment adjustments and/or sensor calibration errors may compensate for actual motions of the spacecraft is discussed, and uncertainties in the dynamics are considered. Particular consideration is given to basic orbit frequency and twice orbit frequency effects and their high correlation over the short science observation data span. On the Tropical Rainfall Measuring Mission (TRMM) spacecraft, the switch to a contingency Kalman filter control mode created changes in the pointing error patterns. Results from independent checks on the TRMM attitude using science instrument data are reported, and bias shifts and error correlations are discussed. Various orbit frequency effects are common with the flight geometry for Earth pointing instruments. In both dual-spin momentum stabilized spacecraft (like OV-2) and three axis stabilized spacecraft with gyros (like TRMM under Kalman filter control), changes in the initial attitude state propagate into orbit frequency variations in attitude and some sensor measurements. At the same time, orbit frequency measurement effects can arise from dynamics assumptions, environment variations, attitude sensor calibrations, or ephemeris errors. Also, constant environment torques for dual spin spacecraft have similar effects to gyro biases on three axis stabilized spacecraft, effectively shifting the one-revolution-per-orbit (1-RPO) body rotation axis. Highly correlated effects can create a risk for estimation errors particularly when a mission switches an operating mode or changes its normal flight environment. Some error effects will not be obvious from attitude sensor

  6. Error Modeling and Calibration for Encoded Sun Sensors

    PubMed Central

    Fan, Qiaoyun; Zhang, Guangjun; Li, Jian; Wei, Xinguo; Li, Xiaoyang

    2013-01-01

    Error factors in the encoded sun sensor (ESS) are analyzed and simulated. Based on the analysis results, an ESS error compensation model containing structural errors and fine-code algorithm errors is established, and the corresponding calibration method for model parameters is proposed. As external parameters, installation deviation between ESS and calibration equipment are introduced to the ESS calibration model, so that the model parameters can be calibrated accurately. The experimental results show that within plus/minus 60 degree of incident angle, the ESS measurement accuracy after compensation is three times higher on average than that before compensation. PMID:23470486

  7. Laser angle sensor

    NASA Technical Reports Server (NTRS)

    Pond, C. R.; Texeira, P. D.

    1985-01-01

    A laser angle measurement system was designed and fabricated for NASA Langley Research Center. The instrument is a fringe counting interferometer that monitors the pitch attitude of a model in a wind tunnel. A laser source and detector are mounted above the model. Interference fringes are generated by a small passive element on the model. The fringe count is accumulated and displayed by a processor in the wind tunnel control room. This report includes optical and electrical schematics, system maintenance and operation procedures.

  8. Angle states in quantum mechanics

    NASA Astrophysics Data System (ADS)

    de la Torre, A. C.; Iguain, J. L.

    1998-12-01

    Angle states and angle operators are defined for a system with arbitrary angular momentum. They provide a reasonable formalization of the concept of angle provided that we accept that the angular orientation is quantized. The angle operator is the generator of boosts in angular momentum and is, almost everywhere, linearly related to the logarithm of the shift operator. Angle states for fermions and bosons behave differently under parity transformation.

  9. Small Angle Neutron Scattering

    SciTech Connect

    Urban, Volker S

    2012-01-01

    Small Angle Neutron Scattering (SANS) probes structural details at the nanometer scale in a non-destructive way. This article gives an introduction to scientists who have no prior small-angle scattering knowledge, but who seek a technique that allows elucidating structural information in challenging situations that thwart approaches by other methods. SANS is applicable to a wide variety of materials including metals and alloys, ceramics, concrete, glasses, polymers, composites and biological materials. Isotope and magnetic interactions provide unique methods for labeling and contrast variation to highlight specific structural features of interest. In situ studies of a material s responses to temperature, pressure, shear, magnetic and electric fields, etc., are feasible as a result of the high penetrating power of neutrons. SANS provides statistical information on significant structural features averaged over the probed sample volume, and one can use SANS to quantify with high precision the structural details that are observed, for example, in electron microscopy. Neutron scattering is non-destructive; there is no need to cut specimens into thin sections, and neutrons penetrate deeply, providing information on the bulk material, free from surface effects. The basic principles of a SANS experiment are fairly simple, but the measurement, analysis and interpretation of small angle scattering data involves theoretical concepts that are unique to the technique and that are not widely known. This article includes a concise description of the basics, as well as practical know-how that is essential for a successful SANS experiment.

  10. Fixture for aligning motor assembly

    DOEpatents

    Shervington, Roger M.; Vaghani, Vallabh V.; Vanek, Laurence D.; Christensen, Scott A.

    2009-12-08

    An alignment fixture includes a rotor fixture, a stator fixture and a sensor system which measures a rotational displacement therebetween. The fixture precisely measures rotation of a generator stator assembly away from a NULL position referenced by a unique reference spline on the rotor shaft. By providing an adjustable location of the stator assembly within the housing, the magnetic axes within each generator shall be aligned to a predetermined and controlled tolerance between the generator interface mounting pin and the reference spline on the rotor shaft. Once magnetically aligned, each generator is essentially a line replaceable unit which may be readily mounted to any input of a multi-generator gearbox assembly with the assurance that the magnetic alignment will be within a predetermined tolerance.

  11. Optimal alignment of mirror based pentaprisms for scanning deflectometric devices

    SciTech Connect

    Barber, Samuel K.; Geckeler, Ralf D.; Yashchuk, Valeriy V.; Gubarev, Mikhail V.; Buchheim, Jana; Siewert, Frank; Zeschke, Thomas

    2011-03-04

    In the recent work [Proc. of SPIE 7801, 7801-2/1-12 (2010), Opt. Eng. 50(5) (2011), in press], we have reported on improvement of the Developmental Long Trace Profiler (DLTP), a slope measuring profiler available at the Advanced Light Source Optical Metrology Laboratory, achieved by replacing the bulk pentaprism with a mirror based pentaprism (MBPP). An original experimental procedure for optimal mutual alignment of the MBPP mirrors has been suggested and verified with numerical ray tracing simulations. It has been experimentally shown that the optimally aligned MBPP allows the elimination of systematic errors introduced by inhomogeneity of the optical material and fabrication imperfections of the bulk pentaprism. In the present article, we provide the analytical derivation and verification of easily executed optimal alignment algorithms for two different designs of mirror based pentaprisms. We also provide an analytical description for the mechanism for reduction of the systematic errors introduced by a typical high quality bulk pentaprism. It is also shown that residual misalignments of an MBPP introduce entirely negligible systematic errors in surface slope measurements with scanning deflectometric devices.

  12. Well-pump alignment system

    DOEpatents

    Drumheller, D.S.

    1998-10-20

    An improved well-pump for geothermal wells, an alignment system for a well-pump, and to a method for aligning a rotor and stator within a well-pump are disclosed, wherein the well-pump has a whistle assembly formed at a bottom portion thereof, such that variations in the frequency of the whistle, indicating misalignment, may be monitored during pumping. 6 figs.

  13. Magnetic alignment study of rare-earth-containing liquid crystals.

    PubMed

    Galyametdinov, Yury G; Haase, Wolfgang; Goderis, Bart; Moors, Dries; Driesen, Kris; Van Deun, Rik; Binnemans, Koen

    2007-12-20

    The liquid-crystalline rare-earth complexes of the type [Ln(LH)3(DOS)3]-where Ln is Tb, Dy, Ho, Er, Tm, or Yb; LH is the Schiff base N-octadecyl-4-tetradecyloxysalicylaldimine; and DOS is dodecylsulfate-exhibit a smectic A phase. Because of the presence of rare-earth ions with a large magnetic anisotropy, the smectic A phase of these liquid crystals can be easier aligned in an external magnetic field than smectic A phases of conventional liquid crystals. The magnetic anisotropy of the [Ln(LH)3(DOS)3] complexes was determined by measurement of the temperature-dependence of the magnetic susceptibility using a Faraday balance. The highest value for the magnetic anisotropy was found for the dysprosium(III) complex. The magnetic alignment of these liquid crystals was studied by time-resolved synchrotron small-angle X-ray scattering experiments. Depending on the sign of the magnetic anisotropy, the director of the liquid-crystalline molecules was aligned parallel or perpendicular to the magnetic field lines. A positive value of the magnetic anisotropy (and parallel alignment) was found for the thulium(III) and the ytterbium(III) complexes, whereas a negative value of the magnetic anisotropy (and perpendicular alignment) was observed for the terbium(III) and dysprosium(III) complexes. PMID:18044875

  14. Empirical assessment of sequencing errors for high throughput pyrosequencing data

    PubMed Central

    2013-01-01

    Background Sequencing-by-synthesis technologies significantly improve over the Sanger method in terms of speed and cost per base. However, they still usually fail to compete in terms of read length and quality. Current high-throughput implementations of the pyrosequencing technique yield reads whose length approach those of the capillary electrophoresis method. A less obvious question is whether their quality is affected by platform-specific sequencing errors. Results We present an empirical study aimed at assessing the quality and characterising sequencing errors for high throughput pyrosequencing data. We have developed a procedure for extracting sequencing error data from genome assemblies and study their characteristics, in particular the length distribution of indel gaps and their relation to the sequence contexts where they occur. We used this procedure to analyse data from three prokaryotic genomes sequenced with the GS FLX technology. We also compared two models previously employed with success for peptide sequence alignment. Conclusions We observed an overall very low error rate in the analysed data, with indel errors being much more abundant than substitutions. We also observed a dependence between the length of the gaps and that of the homopolymer context where they occur. As with protein alignments, a power-law model seems to approximate the indel errors more accurately, although the results are not so conclusive as to justify a depart from the commonly used affine gap penalty scheme. In whichever case, however, our procedure can be used to estimate more realistic error model parameters. PMID:23339526

  15. Slope Error Measurement Tool for Solar Parabolic Trough Collectors: Preprint

    SciTech Connect

    Stynes, J. K.; Ihas, B.

    2012-04-01

    The National Renewable Energy Laboratory (NREL) has developed an optical measurement tool for parabolic solar collectors that measures the combined errors due to absorber misalignment and reflector slope error. The combined absorber alignment and reflector slope errors are measured using a digital camera to photograph the reflected image of the absorber in the collector. Previous work using the image of the reflection of the absorber finds the reflector slope errors from the reflection of the absorber and an independent measurement of the absorber location. The accuracy of the reflector slope error measurement is thus dependent on the accuracy of the absorber location measurement. By measuring the combined reflector-absorber errors, the uncertainty in the absorber location measurement is eliminated. The related performance merit, the intercept factor, depends on the combined effects of the absorber alignment and reflector slope errors. Measuring the combined effect provides a simpler measurement and a more accurate input to the intercept factor estimate. The minimal equipment and setup required for this measurement technique make it ideal for field measurements.

  16. Facts about Refractive Errors

    MedlinePlus

    ... the lens can cause refractive errors. What is refraction? Refraction is the bending of light as it passes ... rays entering the eye, causing a more precise refraction or focus. In many cases, contact lenses provide ...

  17. Errors in prenatal diagnosis.

    PubMed

    Anumba, Dilly O C

    2013-08-01

    Prenatal screening and diagnosis are integral to antenatal care worldwide. Prospective parents are offered screening for common fetal chromosomal and structural congenital malformations. In most developed countries, prenatal screening is routinely offered in a package that includes ultrasound scan of the fetus and the assay in maternal blood of biochemical markers of aneuploidy. Mistakes can arise at any point of the care pathway for fetal screening and diagnosis, and may involve individual or corporate systemic or latent errors. Special clinical circumstances, such as maternal size, fetal position, and multiple pregnancy, contribute to the complexities of prenatal diagnosis and to the chance of error. Clinical interventions may lead to adverse outcomes not caused by operator error. In this review I discuss the scope of the errors in prenatal diagnosis, and highlight strategies for their prevention and diagnosis, as well as identify areas for further research and study to enhance patient safety. PMID:23725900

  18. Error mode prediction.

    PubMed

    Hollnagel, E; Kaarstad, M; Lee, H C

    1999-11-01

    The study of accidents ('human errors') has been dominated by efforts to develop 'error' taxonomies and 'error' models that enable the retrospective identification of likely causes. In the field of Human Reliability Analysis (HRA) there is, however, a significant practical need for methods that can predict the occurrence of erroneous actions--qualitatively and quantitatively. The present experiment tested an approach for qualitative performance prediction based on the Cognitive Reliability and Error Analysis Method (CREAM). Predictions of possible erroneous actions were made for operators using different types of alarm systems. The data were collected as part of a large-scale experiment using professional nuclear power plant operators in a full scope simulator. The analysis showed that the predictions were correct in more than 70% of the cases, and also that the coverage of the predictions depended critically on the comprehensiveness of the preceding task analysis. PMID:10582035

  19. Pronominal Case-Errors

    ERIC Educational Resources Information Center

    Kaper, Willem

    1976-01-01

    Contradicts a previous assertion by C. Tanz that children commit substitution errors usually using objective pronoun forms for nominative ones. Examples from Dutch and German provide evidence that substitutions are made in both directions. (CHK)

  20. Estimating Bias Error Distributions

    NASA Technical Reports Server (NTRS)

    Liu, Tian-Shu; Finley, Tom D.

    2001-01-01

    This paper formulates the general methodology for estimating the bias error distribution of a device in a measuring domain from less accurate measurements when a minimal number of standard values (typically two values) are available. A new perspective is that the bias error distribution can be found as a solution of an intrinsic functional equation in a domain. Based on this theory, the scaling- and translation-based methods for determining the bias error distribution arc developed. These methods are virtually applicable to any device as long as the bias error distribution of the device can be sufficiently described by a power series (a polynomial) or a Fourier series in a domain. These methods have been validated through computational simulations and laboratory calibration experiments for a number of different devices.

  1. Projection-Based Volume Alignment

    PubMed Central

    Yu, Lingbo; Snapp, Robert R.; Ruiz, Teresa; Radermacher, Michael

    2013-01-01

    When heterogeneous samples of macromolecular assemblies are being examined by 3D electron microscopy (3DEM), often multiple reconstructions are obtained. For example, subtomograms of individual particles can be acquired from tomography, or volumes of multiple 2D classes can be obtained by random conical tilt reconstruction. Of these, similar volumes can be averaged to achieve higher resolution. Volume alignment is an essential step before 3D classification and averaging. Here we present a projection-based volume alignment (PBVA) algorithm. We select a set of projections to represent the reference volume and align them to a second volume. Projection alignment is achieved by maximizing the cross-correlation function with respect to rotation and translation parameters. If data are missing, the cross-correlation functions are normalized accordingly. Accurate alignments are obtained by averaging and quadratic interpolation of the cross-correlation maximum. Comparisons of the computation time between PBVA and traditional 3D cross-correlation methods demonstrate that PBVA outperforms the traditional methods. Performance tests were carried out with different signal-to-noise ratios using modeled noise and with different percentages of missing data using a cryo-EM dataset. All tests show that the algorithm is robust and highly accurate. PBVA was applied to align the reconstructions of a subcomplex of the NADH: ubiquinone oxidoreductase (Complex I) from the yeast Yarrowia lipolytica, followed by classification and averaging. PMID:23410725

  2. Error-Compensated Telescope

    NASA Technical Reports Server (NTRS)

    Meinel, Aden B.; Meinel, Marjorie P.; Stacy, John E.

    1989-01-01

    Proposed reflecting telescope includes large, low-precision primary mirror stage and small, precise correcting mirror. Correcting mirror machined under computer control to compensate for error in primary mirror. Correcting mirror machined by diamond cutting tool. Computer analyzes interferometric measurements of primary mirror to determine shape of surface of correcting mirror needed to compensate for errors in wave front reflected from primary mirror and commands position and movement of cutting tool accordingly.

  3. BinAligner: a heuristic method to align biological networks.

    PubMed

    Yang, Jialiang; Li, Jun; Grünewald, Stefan; Wan, Xiu-Feng

    2013-01-01

    The advances in high throughput omics technologies have made it possible to characterize molecular interactions within and across various species. Alignments and comparison of molecular networks across species will help detect orthologs and conserved functional modules and provide insights on the evolutionary relationships of the compared species. However, such analyses are not trivial due to the complexity of network and high computational cost. Here we develop a mixture of global and local algorithm, BinAligner, for network alignments. Based on the hypotheses that the similarity between two vertices across networks would be context dependent and that the information from the edges and the structures of subnetworks can be more informative than vertices alone, two scoring schema, 1-neighborhood subnetwork and graphlet, were introduced to derive the scoring matrices between networks, besides the commonly used scoring scheme from vertices. Then the alignment problem is formulated as an assignment problem, which is solved by the combinatorial optimization algorithm, such as the Hungarian method. The proposed algorithm was applied and validated in aligning the protein-protein interaction network of Kaposi's sarcoma associated herpesvirus (KSHV) and that of varicella zoster virus (VZV). Interestingly, we identified several putative functional orthologous proteins with similar functions but very low sequence similarity between the two viruses. For example, KSHV open reading frame 56 (ORF56) and VZV ORF55 are helicase-primase subunits with sequence identity 14.6%, and KSHV ORF75 and VZV ORF44 are tegument proteins with sequence identity 15.3%. These functional pairs can not be identified if one restricts the alignment into orthologous protein pairs. In addition, BinAligner identified a conserved pathway between two viruses, which consists of 7 orthologous protein pairs and these proteins are connected by conserved links. This pathway might be crucial for virus packing and

  4. Thermodynamics of Error Correction

    NASA Astrophysics Data System (ADS)

    Sartori, Pablo; Pigolotti, Simone

    2015-10-01

    Information processing at the molecular scale is limited by thermal fluctuations. This can cause undesired consequences in copying information since thermal noise can lead to errors that can compromise the functionality of the copy. For example, a high error rate during DNA duplication can lead to cell death. Given the importance of accurate copying at the molecular scale, it is fundamental to understand its thermodynamic features. In this paper, we derive a universal expression for the copy error as a function of entropy production and work dissipated by the system during wrong incorporations. Its derivation is based on the second law of thermodynamics; hence, its validity is independent of the details of the molecular machinery, be it any polymerase or artificial copying device. Using this expression, we find that information can be copied in three different regimes. In two of them, work is dissipated to either increase or decrease the error. In the third regime, the protocol extracts work while correcting errors, reminiscent of a Maxwell demon. As a case study, we apply our framework to study a copy protocol assisted by kinetic proofreading, and show that it can operate in any of these three regimes. We finally show that, for any effective proofreading scheme, error reduction is limited by the chemical driving of the proofreading reaction.

  5. Alignment of a three-mirror anastigmatic telescope using nodal aberration theory.

    PubMed

    Gu, Zhiyuan; Yan, Changxiang; Wang, Yang

    2015-09-21

    Most computer-aided alignment methods for optical systems are based on numerical algorithms at present, which omit aberration theory. This paper presents a novel alignment algorithm for three-mirror anastigmatic (TMA) telescopes using Nodal Aberration Theory (NAT). The aberration field decenter vectors and boresight error of misaligned TMA telescopes are derived. Two alignment models based on 3rd and 5th order NAT are established successively and compared in the same alignment example. It is found that the average and the maximum RMS wavefront errors in the whole field of view of 0.3° × 0.15° are 0.063 λ (λ = 1 μm) and 0.068 λ respectively after the 4th alignment action with the 3rd order model, and 0.011 λ and 0.025 λ (nominal values) respectively after the 3rd alignment action with the 5th order model. Monte-Carlo alignment simulations are carried out with the 5th order model. It shows that the 5th order model still has good performance even when the misalignment variables are large (-1 mm≤linear misalignment≤1 mm, -0.1°≤angular misalignment≤0.1°), and multiple iterative alignments are needed when the misalignment variables increase. PMID:26406716

  6. Aberration and boresight error correction for conformal aircraft windows using the inner window surface and tilted fixed correctors.

    PubMed

    Zhao, Chunzhu; Cui, Qingfeng; Mao, Shan

    2016-04-01

    A static solution to aberrations and boresight error for tilted conformal aircraft windows at different look angles is reported. The solution uses the inner window surface to correct the window aberrations at a 0° look angle and uses fixed correctors behind the window to correct the residual window aberrations at other look angles. Then, the boresight error for the window at different look angles is corrected by tilting the fixed correctors. The principle of the solution is discussed, and a design example shows that the solution is effective in correcting the aberrations and boresight error for a tilted conformal aircraft window at different look angles. PMID:27139665

  7. Note: High precision angle generator using multiple ultrasonic motors and a self-calibratable encoder

    NASA Astrophysics Data System (ADS)

    Kim, Jong-Ahn; Kim, Jae Wan; Kang, Chu-Shik; Jin, Jonghan; Bong Eom, Tae

    2011-11-01

    We present an angle generator with high resolution and accuracy, which uses multiple ultrasonic motors and a self-calibratable encoder. A cylindrical air bearing guides a rotational motion, and the ultrasonic motors achieve high resolution over the full circle range with a simple configuration. The self-calibratable encoder can compensate the scale error of a divided circle (signal period: 20″) effectively by applying the equal-division-averaged method. The angle generator configures a position feedback control loop using the readout of the encoder. By combining the ac and dc operation mode, the angle generator produced stepwise angular motion with 0.005″ resolution. We also evaluated the performance of the angle generator using a precision angle encoder and an autocollimator. The expanded uncertainty (k = 2) in the angle generation was estimated less than 0.03″, which included the calibrated scale error and the nonlinearity error.

  8. Ischemia detection from morphological QRS angle changes.

    PubMed

    Romero, Daniel; Martínez, Juan Pablo; Laguna, Pablo; Pueyo, Esther

    2016-07-01

    In this paper, an ischemia detector is presented based on the analysis of QRS-derived angles. The detector has been developed by modeling ischemic effects on the QRS angles as a gradual change with a certain transition time and assuming a Laplacian additive modeling error contaminating the angle series. Both standard and non-standard leads were used for analysis. Non-standard leads were obtained by applying the PCA technique over specific lead subsets to represent different potential locations of the ischemic zone. The performance of the proposed detector was tested over a population of 79 patients undergoing percutaneous coronary intervention in one of the major coronary arteries (LAD (n  =  25), RCA (n  =  16) and LCX (n  =  38)). The best detection performance, obtained for standard ECG leads, was achieved in the LAD group with values of sensitivity and specificity of [Formula: see text], [Formula: see text], followed by the RCA group with [Formula: see text], Sp  =  94.4 and the LCX group with [Formula: see text], [Formula: see text], notably outperforming detection based on the ST series in all cases, with the same detector structure. The timing of the detected ischemic events ranged from 30 s up to 150 s (mean  =  66.8 s) following the start of occlusion. We conclude that changes in the QRS angles can be used to detect acute myocardial ischemia. PMID:27243441

  9. Bounded-Angle Iterative Decoding of LDPC Codes

    NASA Technical Reports Server (NTRS)

    Dolinar, Samuel; Andrews, Kenneth; Pollara, Fabrizio; Divsalar, Dariush

    2009-01-01

    Bounded-angle iterative decoding is a modified version of conventional iterative decoding, conceived as a means of reducing undetected-error rates for short low-density parity-check (LDPC) codes. For a given code, bounded-angle iterative decoding can be implemented by means of a simple modification of the decoder algorithm, without redesigning the code. Bounded-angle iterative decoding is based on a representation of received words and code words as vectors in an n-dimensional Euclidean space (where n is an integer).

  10. Control of Angular Intervals for Angle-Multiplexed Holographic Memory

    NASA Astrophysics Data System (ADS)

    Kinoshita, Nobuhiro; Muroi, Tetsuhiko; Ishii, Norihiko; Kamijo, Koji; Shimidzu, Naoki

    2009-03-01

    In angle-multiplexed holographic memory, the full width at half maximum of the Bragg selectivity curves is dependent on the angle formed between the medium and incident laser beams. This indicates the possibility of high density and high multiplexing number by varying the angular intervals between adjacent holograms. We propose an angular interval scheduling for closely stacking holograms into medium even when the angle range is limited. We obtained bit error rates of the order of 10-4 under the following conditions: medium thickness of 1 mm, laser beam wavelength of 532 nm, and angular multiplexing number of 300.

  11. Beam-Based Alignment of Magnetic Field in the Fermilab Electron Cooler Cooling Section

    SciTech Connect

    Seletskiy, S. M.; Tupikov, V.

    2006-03-20

    The Fermilab Electron Cooling Project requires low effective anglular spread of electrons in the cooling section. One of the main components of the effective electron angles is an angle of electron beam centroid with respect to antiproton beam. This angle is caused by the poor quality of magnetic field in the 20 m long cooling section solenoid and by the mismatch of the beam centroid to the entrance of the cooling section. This paper focuses on the beam-based procedure of the alignment of the cooling section field and beam centroid matching. The discussed procedure allows to suppress the beam centroid angles below the critical value of 0.1 mrad.

  12. Junctional angle of a bihanded helix.

    PubMed

    Yang, Jing; Wolgemuth, Charles W; Huber, Greg

    2014-10-01

    Helical filaments having sections of reversed chirality are common phenomena in the biological realm. The apparent angle between the two sections of opposite handedness provides information about the geometry and elasticity of the junctional region. In this paper, the governing differential equations for the local helical axis are developed, and asymptotic solutions of the governing equations are solved by perturbation theory. The asymptotic solutions are compared with the corresponding numerical solutions, and the relative error at second order is found to be less than 1.5% over a range of biologically relevant curvature and torsion values from 0 to 1/2 in dimensionless units. PMID:25375538

  13. Wide Angle Movie

    NASA Technical Reports Server (NTRS)

    1999-01-01

    This brief movie illustrates the passage of the Moon through the Saturn-bound Cassini spacecraft's wide-angle camera field of view as the spacecraft passed by the Moon on the way to its closest approach with Earth on August 17, 1999. From beginning to end of the sequence, 25 wide-angle images (with a spatial image scale of about 14 miles per pixel (about 23 kilometers)were taken over the course of 7 and 1/2 minutes through a series of narrow and broadband spectral filters and polarizers, ranging from the violet to the near-infrared regions of the spectrum, to calibrate the spectral response of the wide-angle camera. The exposure times range from 5 milliseconds to 1.5 seconds. Two of the exposures were smeared and have been discarded and replaced with nearby images to make a smooth movie sequence. All images were scaled so that the brightness of Crisium basin, the dark circular region in the upper right, is approximately the same in every image. The imaging data were processed and released by the Cassini Imaging Central Laboratory for Operations (CICLOPS)at the University of Arizona's Lunar and Planetary Laboratory, Tucson, AZ.

    Photo Credit: NASA/JPL/Cassini Imaging Team/University of Arizona

    Cassini, launched in 1997, is a joint mission of NASA, the European Space Agency and Italian Space Agency. The mission is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Space Science, Washington DC. JPL is a division of the California Institute of Technology, Pasadena, CA.

  14. Polymer-Layer-Free Alignment for Fast Switching Nematic Liquid Crystals by Multifunctional Nanostructured Substrate.

    PubMed

    Jung, Woo-Bin; Jeong, Hyeon Su; Jeon, Hwan-Jin; Kim, Yun Ho; Hwang, Jeong Yeon; Kim, Jae-Hoon; Jung, Hee-Tae

    2015-11-01

    A novel polymer-layer-free system for liquid-crystal alignment is demonstrated by various shaped indium tin oxide (ITO) patterns. Liquid crystals are aligned along the ITO line pattern and secondary sputtering lithography can change the shape of the ITO line pattern. Different shapes can control the direction and size of the pretilt angle. This effect eliminates defects and reduces the response time. PMID:26418973

  15. Implications of the small aspect angles of equatorial spread F

    SciTech Connect

    Hysell, D.L.; Farley, D.T.

    1996-03-01

    Small-scale equatorial spread F irregularities are almost perfectly aligned with the geomagnetic field. The authors develop here an analytic plasma kinetic theory of small-scale, quasi-field-aligned irregularities that include ion viscosity and finite Larmor radius effects. They conclude, for one thing, that the measured aspect angles are too small to be consistent with a dissipative drift wave source of 3-m irregularities. Nonlinearly driven flute modes appear to be the only available mechanism. The authors compare the relative influence of parallel and perpendicular dissipation and conclude that the aspect width depends only weakly on any single geophysical parameters, such as collision frequency, gradient length, temperature, etc. This finding is consistent with their observation that the measured aspect angles vary little with altitude and only weakly with instability level. 29 refs., 5 figs.

  16. Laser angle measurement system

    NASA Technical Reports Server (NTRS)

    Pond, C. R.; Texeira, P. D.; Wilbert, R. E.

    1980-01-01

    The design and fabrication of a laser angle measurement system is described. The instrument is a fringe counting interferometer that monitors the pitch attitude of a model in a wind tunnel. A laser source and detector are mounted above the mode. Interference fringes are generated by a small passive element on the model. The fringe count is accumulated and displayed by a processor in the wind tunnel control room. Optical and electrical schematics, system maintenance and operation procedures are included, and the results of a demonstration test are given.

  17. Human error in aviation operations

    NASA Technical Reports Server (NTRS)

    Nagel, David C.

    1988-01-01

    The role of human error in commercial and general aviation accidents and the techniques used to evaluate it are reviewed from a human-factors perspective. Topics addressed include the general decline in accidents per million departures since the 1960s, the increase in the proportion of accidents due to human error, methods for studying error, theoretical error models, and the design of error-resistant systems. Consideration is given to information acquisition and processing errors, visually guided flight, disorientation, instrument-assisted guidance, communication errors, decision errors, debiasing, and action errors.

  18. Errata: Papers in Error Analysis.

    ERIC Educational Resources Information Center

    Svartvik, Jan, Ed.

    Papers presented at the symposium of error analysis in Lund, Sweden, in September 1972, approach error analysis specifically in its relation to foreign language teaching and second language learning. Error analysis is defined as having three major aspects: (1) the description of the errors, (2) the explanation of errors by means of contrastive…

  19. A vision-aided alignment datum system for coordinate measuring machines

    NASA Astrophysics Data System (ADS)

    Wang, L.; Lin, G. C. I.

    1997-07-01

    This paper presents the development of a CAD-based and vision-aided precision measurement system. A new coordinate system alignment technique for coordinate measuring machines (CMMs) is described. This alignment technique involves a machine vision system with CAD-based planning and execution of inspection. The determination method for measuring datums for the coordinate measuring technique, using the AutoCAD development system, is described in more detail. To improve image quality in the machine vision system, a contrast enhancement technique is used on the image background to reduce image noise, and an on-line calibration technique is applied. Some systematic errors may be caused by imperfect geometric features in components during coordinate system alignment. This measurement system approach, with its new measuring coordinate alignment method, can be used for high-precision measurement to overcome such errors.

  20. Program for PET image alignment: Effects on calculated differences in cerebral metabolic rates for glucose

    SciTech Connect

    Phillips, R.L.; London, E.D.; Links, J.M.; Cascella, N.G. )

    1990-12-01

    A program was developed to align positron emission tomography images from multiple studies on the same subject. The program allowed alignment of two images with a fineness of one-tenth the width of a pixel. The indications and effects of misalignment were assessed in eight subjects from a placebo-controlled double-blind crossover study on the effects of cocaine on regional cerebral metabolic rates for glucose. Visual examination of a difference image provided a sensitive and accurate tool for assessing image alignment. Image alignment within 2.8 mm was essential to reduce variability of measured cerebral metabolic rates for glucose. Misalignment by this amount introduced errors on the order of 20% in the computed metabolic rate for glucose. These errors propagate to the difference between metabolic rates for a subject measured in basal versus perturbed states.

  1. Smoothing error pitfalls

    NASA Astrophysics Data System (ADS)

    von Clarmann, T.

    2014-09-01

    The difference due to the content of a priori information between a constrained retrieval and the true atmospheric state is usually represented by a diagnostic quantity called smoothing error. In this paper it is shown that, regardless of the usefulness of the smoothing error as a diagnostic tool in its own right, the concept of the smoothing error as a component of the retrieval error budget is questionable because it is not compliant with Gaussian error propagation. The reason for this is that the smoothing error does not represent the expected deviation of the retrieval from the true state but the expected deviation of the retrieval from the atmospheric state sampled on an arbitrary grid, which is itself a smoothed representation of the true state; in other words, to characterize the full loss of information with respect to the true atmosphere, the effect of the representation of the atmospheric state on a finite grid also needs to be considered. The idea of a sufficiently fine sampling of this reference atmospheric state is problematic because atmospheric variability occurs on all scales, implying that there is no limit beyond which the sampling is fine enough. Even the idealization of infinitesimally fine sampling of the reference state does not help, because the smoothing error is applied to quantities which are only defined in a statistical sense, which implies that a finite volume of sufficient spatial extent is needed to meaningfully discuss temperature or concentration. Smoothing differences, however, which play a role when measurements are compared, are still a useful quantity if the covariance matrix involved has been evaluated on the comparison grid rather than resulting from interpolation and if the averaging kernel matrices have been evaluated on a grid fine enough to capture all atmospheric variations that the instruments are sensitive to. This is, under the assumptions stated, because the undefined component of the smoothing error, which is the

  2. Compact disk error measurements

    NASA Technical Reports Server (NTRS)

    Howe, D.; Harriman, K.; Tehranchi, B.

    1993-01-01

    The objectives of this project are as follows: provide hardware and software that will perform simple, real-time, high resolution (single-byte) measurement of the error burst and good data gap statistics seen by a photoCD player read channel when recorded CD write-once discs of variable quality (i.e., condition) are being read; extend the above system to enable measurement of the hard decision (i.e., 1-bit error flags) and soft decision (i.e., 2-bit error flags) decoding information that is produced/used by the Cross Interleaved - Reed - Solomon - Code (CIRC) block decoder employed in the photoCD player read channel; construct a model that uses data obtained via the systems described above to produce meaningful estimates of output error rates (due to both uncorrected ECC words and misdecoded ECC words) when a CD disc having specific (measured) error statistics is read (completion date to be determined); and check the hypothesis that current adaptive CIRC block decoders are optimized for pressed (DAD/ROM) CD discs. If warranted, do a conceptual design of an adaptive CIRC decoder that is optimized for write-once CD discs.

  3. Direct inelastic scattering of N/sub 2/ from Ag(111). I. Rotational populations and alignment

    SciTech Connect

    Sitz, G.O.; Kummel, A.C.; Zare, R.N.

    1988-08-15

    The rotational state populations and the quadrupole and hexadecapole alignment moments of N/sub 2/ scattered off clean Ag(111) are determined by resonance enhanced multiphoton ionization (REMPI). The scattered N/sub 2/ is found to be highly aligned with its rotational angular momentum vector J parallel to the surface. The degree of alignment is found to increase with increasing rotational excitation. We see less than perfect alignment at intermediate J values indicating that the surface is not completely flat. The alignment is relatively insensitive to incident energy, incident angle, or surface temperature T/sub s/. However, the rotational state population distributions show pronounced rainbows for higher incident energy and/or more grazing exit angle. The rotational state distributions are found to depend strongly on the final scattering angle at low T/sub s/; this effect is markedly reduced at higher T/sub s/. Time-of-flight measurements are used to determine the average velocity of the scattered N/sub 2/ as a function of rotational level. It is found that higher rotational excitation correlates with lower average velocity and that the incident molecules lose 20%--30% of their translational energy to the solid. No correlation is found between velocity and alignment. A comparison is made with published results for the NO/Ag(111) system and a variety of theoretical models found in the literature.

  4. Variable angle correlation spectroscopy

    SciTech Connect

    Lee, Y K

    1994-05-01

    In this dissertation, a novel nuclear magnetic resonance (NMR) technique, variable angle correlation spectroscopy (VACSY) is described and demonstrated with {sup 13}C nuclei in rapidly rotating samples. These experiments focus on one of the basic problems in solid state NMR: how to extract the wealth of information contained in the anisotropic component of the NMR signal while still maintaining spectral resolution. Analysis of the anisotropic spectral patterns from poly-crystalline systems reveal information concerning molecular structure and dynamics, yet in all but the simplest of systems, the overlap of spectral patterns from chemically distinct sites renders the spectral analysis difficult if not impossible. One solution to this problem is to perform multi-dimensional experiments where the high-resolution, isotropic spectrum in one dimension is correlated with the anisotropic spectral patterns in the other dimensions. The VACSY technique incorporates the angle between the spinner axis and the static magnetic field as an experimental parameter that may be incremented during the course of the experiment to help correlate the isotropic and anisotropic components of the spectrum. The two-dimensional version of the VACSY experiments is used to extract the chemical shift anisotropy tensor values from multi-site organic molecules, study molecular dynamics in the intermediate time regime, and to examine the ordering properties of partially oriented samples. The VACSY technique is then extended to three-dimensional experiments to study slow molecular reorientations in a multi-site polymer system.

  5. Measures on mixing angles

    SciTech Connect

    Gibbons, Gary W.; Gielen, Steffen; Pope, C. N.; Turok, Neil

    2009-01-01

    We address the problem of the apparently very small magnitude of CP violation in the standard model, measured by the Jarlskog invariant J. In order to make statements about probabilities for certain values of J, we seek to find a natural measure on the space of Kobayashi-Maskawa matrices, the double quotient U(1){sup 2}/SU(3)/U(1){sup 2}. We review several possible, geometrically motivated choices of the measure, and compute expectation values for powers of J for these measures. We find that different choices of the measure generically make the observed magnitude of CP violation appear finely tuned. Since the quark masses and the mixing angles are determined by the same set of Yukawa couplings, we then do a second calculation in which we take the known quark mass hierarchy into account. We construct the simplest measure on the space of 3x3 Hermitian matrices which reproduces this known hierarchy. Calculating expectation values for powers of J in this second approach, we find that values of J close to the observed value are now rather likely, and there does not seem to be any fine-tuning. Our results suggest that the choice of Kobayashi-Maskawa angles is closely linked to the observed mass hierarchy. We close by discussing the corresponding case of neutrinos.

  6. First-order approximation error analysis of Risley-prism-based beam directing system.

    PubMed

    Zhao, Yanyan; Yuan, Yan

    2014-12-01

    To improve the performance of a Risley-prism system for optical detection and measuring applications, it is necessary to be able to determine the direction of the outgoing beam with high accuracy. In previous works, error sources and their impact on the performance of the Risley-prism system have been analyzed, but their numerical approximation accuracy was not high. Besides, pointing error analysis of the Risley-prism system has provided results for the case when the component errors, prism orientation errors, and assembly errors are certain. In this work, the prototype of a Risley-prism system was designed. The first-order approximations of the error analysis were derived and compared with the exact results. The directing errors of a Risley-prism system associated with wedge-angle errors, prism mounting errors, and bearing assembly errors were analyzed based on the exact formula and the first-order approximation. The comparisons indicated that our first-order approximation is accurate. In addition, the combined errors produced by the wedge-angle errors and mounting errors of the two prisms together were derived and in both cases were proved to be the sum of errors caused by the first and the second prism separately. Based on these results, the system error of our prototype was estimated. The derived formulas can be implemented to evaluate beam directing errors of any Risley-prism beam directing system with a similar configuration. PMID:25607958

  7. Alignments of radio galaxies in deep radio imaging of ELAIS N1

    NASA Astrophysics Data System (ADS)

    Taylor, A. R.; Jagannathan, P.

    2016-06-01

    We present a study of the distribution of radio jet position angles of radio galaxies over an area of 1 square degree in the ELAIS N1 field. ELAIS N1 was observed with the Giant Metrewave Radio Telescope at 612 MHz to an rms noise level of 10 μJy and angular resolution of 6 arcsec × 5 arcsec. The image contains 65 resolved radio galaxy jets. The spatial distribution reveals a prominent alignment of jet position angles along a `filament' of about 1°. We examine the possibility that the apparent alignment arises from an underlying random distribution and find that the probability of chance alignment is less than 0.1 per cent. An angular covariance analysis of the data indicates the presence of spatially coherence in position angles on scales >0 .^{circ}5. This angular scales translates to a comoving scale of >20 Mpc at a redshift of 1. The implied alignment of the spin axes of massive black holes that give rise to the radio jets suggest the presence of large-scale spatial coherence in angular momentum. Our results reinforce prior evidence for large-scale spatial alignments of quasar optical polarization position angles.

  8. Aligned Nanofibers for Regenerating Arteries, Nerves, and Muscles

    NASA Astrophysics Data System (ADS)

    McClendon, Mark Trosper

    Cells are the fundamental unit of the human body, and therefore the ability to control cell behavior is the most important challenge in regenerative medicine. Peptides are the language of biology which is why synthetic peptide amphiphile (PA) molecules hold great potential as a biomaterial. The work presented in this dissertation explores a variety of liquid crystalline PA nanofibers as a means for directing cell growth. Shaping the alignment of these nanofiber networks requires a deep understanding of their rheological properties which presents a difficult challenge as they exist in complex solid and liquid environments. Using PA molecules that self-assemble into high aspect ratio nanofibers and liquid crystalline solutions, this work investigates the influence of shear flow on macroscopic and microscopic nanofiber alignment. To this end, a shear force applied to PA solutions was systematically varied while the alignment was probed using small angle x-ray scattering. Nanofibers were found to respond to shear flow by aligning parallel to the flow direction. By changing pH and PA chemical sequence it was observed that increasing the interfiber electrostatic repulsive interactions resulted in a greater dependence on shear rate. Nanofiber solutions having greater repulsion did not drastically increase in alignment when the applied strain was increased by two orders of magnitude (1 s -1 to 100 s-1), while solutions with nanofibers having less repulsion increased there alignment four fold with the same strain increase. say exactly what you mean by resulted in greater dependence: did it result in fibers aligning under lower shear rates or higher rates--give the results Anionic PA solutions typically used to encapsulate living cells at neutral pH were found to require minimal shear rates, <1s-1, to achieve significant nanofiber alignment. In an effort to produce tubular hydrogels composed of circumferentially aligned nanofibers, a procedure was designed that used an

  9. Automatic alignment of standard views in 3D echocardiograms using real-time tracking

    NASA Astrophysics Data System (ADS)

    Orderud, Fredrik; Torp, Hans; Rabben, Stein Inge

    2009-02-01

    In this paper, we present an automatic approach for alignment of standard apical and short-axis slices, and correcting them for out-of-plane motion in 3D echocardiography. This is enabled by using real-time Kalman tracking to perform automatic left ventricle segmentation using a coupled deformable model, consisting of a left ventricle model, as well as structures for the right ventricle and left ventricle outflow tract. Landmark points from the segmented model are then used to generate standard apical and short-axis slices. The slices are automatically updated after tracking in each frame to correct for out-of-plane motion caused by longitudinal shortening of the left ventricle. Results from a dataset of 35 recordings demonstrate the potential for automating apical slice initialization and dynamic short-axis slices. Apical 4-chamber, 2-chamber and long-axis slices are generated based on an assumption of fixed angle between the slices, and short-axis slices are generated so that they follow the same myocardial tissue over the entire cardiac cycle. The error compared to manual annotation was 8.4 +/- 3.5 mm for apex, 3.6 +/- 1.8 mm for mitral valve and 8.4 +/- 7.4 for apical 4-chamber view. The high computational efficiency and automatic behavior of the method enables it to operate in real-time, potentially during image acquisition.

  10. Attitude control with realization of linear error dynamics

    NASA Technical Reports Server (NTRS)

    Paielli, Russell A.; Bach, Ralph E.

    1993-01-01

    An attitude control law is derived to realize linear unforced error dynamics with the attitude error defined in terms of rotation group algebra (rather than vector algebra). Euler parameters are used in the rotational dynamics model because they are globally nonsingular, but only the minimal three Euler parameters are used in the error dynamics model because they have no nonlinear mathematical constraints to prevent the realization of linear error dynamics. The control law is singular only when the attitude error angle is exactly pi rad about any eigenaxis, and a simple intuitive modification at the singularity allows the control law to be used globally. The forced error dynamics are nonlinear but stable. Numerical simulation tests show that the control law performs robustly for both initial attitude acquisition and attitude control.

  11. A Note on Angle Construction

    ERIC Educational Resources Information Center

    Francis, Richard L.

    1978-01-01

    The author investigates the construction of angles (using Euclidean tools) through a numerical approach. He calls attention to the surprising impossibility of constructing the conventional units of angle measure--the degree, minute, second, radian, and mil. (MN)

  12. Comparison of Friction Characteristics on TN and VA Mode Alignment Films with Friction Force Microscopy

    NASA Astrophysics Data System (ADS)

    Kwak, Musun; Chung, Hanrok; Kwon, Hyukmin; Kim, Jehyun; Han, Daekyung; Yi, Yoonseon; Lee, Sangmun; Lee, Chulgu; Cha, Sooyoul

    Using frictional force microscopy (FFM), the friction surface characteristics were compared between twisted nematic (TN) mode and vertical alignment (VA) mode alignment films (AFs). The friction asymmetry was detected depending on temperature conditions on TN mode AF, but not on VA mode AF. The difference between two modes was explained by leaning intermolecular repulsion caused by the pre-tilt angle uniformity and the density of side chain. No level difference according to temperature conditions appeared when the pre-tilt angle were measured after liquid crystal (LC) injection.

  13. Twisted liquid crystal pi cell stabilized by polymer-sustained alignment

    SciTech Connect

    Chen, T.-J.; Cheng, Y.-H.; Wu, S.-M.

    2008-12-01

    A uniform {pi}-twist liquid crystal (LC) alignment was stabilized in a pi cell by photopolymerization of a minute amount of monomers without using any chiral material. Controlling UV exposure time can vary the LC pretilt angle to achieve a stabilized {pi}-twist state. This type of {pi}-twisted LC cell made using the polymer-sustained alignment has a pretilt angle estimated to be {approx}20 deg. This cell can quickly transform into a bend state at a low driving voltage and shows excellent brightness and optical contrast, as compared with a conventional pi cell and a chiral-doped cell.

  14. Experimental Quantum Error Detection

    PubMed Central

    Jin, Xian-Min; Yi, Zhen-Huan; Yang, Bin; Zhou, Fei; Yang, Tao; Peng, Cheng-Zhi

    2012-01-01

    Faithful transmission of quantum information is a crucial ingredient in quantum communication networks. To overcome the unavoidable decoherence in a noisy channel, to date, many efforts have been made to transmit one state by consuming large numbers of time-synchronized ancilla states. However, such huge demands of quantum resources are hard to meet with current technology and this restricts practical applications. Here we experimentally demonstrate quantum error detection, an economical approach to reliably protecting a qubit against bit-flip errors. Arbitrary unknown polarization states of single photons and entangled photons are converted into time bins deterministically via a modified Franson interferometer. Noise arising in both 10 m and 0.8 km fiber, which induces associated errors on the reference frame of time bins, is filtered when photons are detected. The demonstrated resource efficiency and state independence make this protocol a promising candidate for implementing a real-world quantum communication network. PMID:22953047

  15. Measurement error revisited

    NASA Astrophysics Data System (ADS)

    Henderson, Robert K.

    1999-12-01

    It is widely accepted in the electronics industry that measurement gauge error variation should be no larger than 10% of the related specification window. In a previous paper, 'What Amount of Measurement Error is Too Much?', the author used a framework from the process industries to evaluate the impact of measurement error variation in terms of both customer and supplier risk (i.e., Non-conformance and Yield Loss). Application of this framework in its simplest form suggested that in many circumstances the 10% criterion might be more stringent than is reasonably necessary. This paper reviews the framework and results of the earlier work, then examines some of the possible extensions to this framework suggested in that paper, including variance component models and sampling plans applicable in the photomask and semiconductor businesses. The potential impact of imperfect process control practices will be examined as well.

  16. Global Alignment System for Large Genomic Sequencing

    2002-03-01

    AVID is a global alignment system tailored for the alignment of large genomic sequences up to megabases in length. Features include the possibility of one sequence being in draft form, fast alignment, robustness and accuracy. The method is an anchor based alignment using maximal matches derived from suffix trees.

  17. Measuring Parameters of Massive Black Hole Binaries with Partially-Aligned Spins

    NASA Technical Reports Server (NTRS)

    Lang, Ryan N.; Hughes, Scott A.; Cornish, Neil J.

    2010-01-01

    It is important to understand how well the gravitational-wave observatory LISA can measure parameters of massive black hole binaries. It has been shown that including spin precession in the waveform breaks degeneracies and produces smaller expected parameter errors than a simpler, precession-free analysis. However, recent work has shown that gas in binaries can partially align the spins with the orbital angular momentum, thus reducing the precession effect. We show how this degrades the earlier results, producing more pessimistic errors in gaseous mergers. However, we then add higher harmonics to the signal model; these also break degeneracies, but they are not affected by the presence of gas. The harmonics often restore the errors in partially-aligned binaries to the same as, or better than/ those that are obtained for fully precessing binaries with no harmonics. Finally, we investigate what LISA measurements of spin alignment can tell us about the nature of gas around a binary,

  18. Computational studies of the x-ray scattering properties of laser aligned stilbene

    SciTech Connect

    Debnarova, Andrea; Techert, Simone; Schmatz, Stefan

    2011-02-07

    The enhancement of the x-ray scattering signal from partially aligned molecular samples is investigated. The alignment properties of the studied molecular system are modeled based on the method of laser alignment. With the advances in the area of laser alignment of molecules, the application of this sample manipulation technique promises a great potential for x-ray scattering measurements. Preferential alignment of molecules in an otherwise amorphous sample leads to constructive interference and thus increases the scattering intensity. This enhances the structural information encoded in the scattering images and enables improved resolution in studies of reaction dynamics, as in this work is shown for the example of the photo-isomerization of stilbene. We demonstrate that the scattering signal is strongly influenced by the alignment axis. Even the most basic one-dimensional alignment offers significant improvement compared to the structural information provided by a randomly oriented sample. Although the signal is sensitive to the uncertainty in the alignment angle, it offers encouraging results even at realistic alignment uncertainties.

  19. Correcting for Position Errors in Variational Data Assimilation

    NASA Astrophysics Data System (ADS)

    Nehrkorn, T.; Woods, B. K.; Auligne, T.; Hoffman, R. N.

    2013-12-01

    Forecasts used in variational data assimilation schemes for the atmosphere and ocean often exhibit significant position errors. In standard data assimilation approaches position errors often result in background errors that have complex error correlations, are not normally distributed, and are particularly difficult to correct. In addition, in the case of atmospheric data assimilation of cloud-related quantities, complications arise from the fact that cost function gradients are zero in cases where the first guess does not produce clouds or precipitation, making it difficult to correct cases where observed and predicted areas of clouds or precipitation do not coincide. A number of approaches have been proposed to measure and correct position or phase errors, ranging from techniques originating from image processing such as 'image warping' or 'morphing' and 'optical flow', object-oriented verification measures, to alignment approaches aimed at data assimilation improvements. We present an implementation of a displacement scheme to correct phase errors based on the feature calibration and alignment procedure described in Grassotti et al. [1]. In its original formulation, a set of two-dimensional displacement vectors is applied to forecast fields to improve the alignment of features in the forecast and observations. These displacement vectors are obtained by a nonlinear minimization of a cost function that measures the misfit to observations, along with a number of additional constraints (e.g., smoothness and non-divergence of the displacement vectors) to prevent unphysical solutions. Results from this implementation will be compared with a more recent implementation within the WRF-Var algorithm, in which the nonlinear minimization is replaced by the (linear) conjugate gradient inner-loop minimization combined with outer loop nonlinear adjustments, and the ad-hoc penalty function constraints are replaced by an error-covariance representation of the displacement

  20. Wide Angle View of Arsia Mons Volcano

    NASA Technical Reports Server (NTRS)

    1999-01-01

    Arsia Mons (above) is one of the largest volcanoes known. This shield volcano is part of an aligned trio known as the Tharsis Montes--the others are Pavonis Mons and Ascraeus Mons. Arsia Mons is rivaled only by Olympus Mons in terms of its volume. The summit of Arsia Mons is more than 9 kilometers (5.6 miles) higher than the surrounding plains. The crater--or caldera--at the volcano summit is approximately 110 km (68 mi) across. This view of Arsia Mons was taken by the red and blue wide angle cameras of the Mars Global Surveyor Mars Orbiter Camera (MOC) system. Bright water ice clouds (the whitish/bluish wisps) hang above the volcano--a common sight every martian afternoon in this region. Arsia Mons is located at 120o west longitude and 9o south latitude. Illumination is from the left.

  1. A No-Buff Technique to Produce Surfaces That Induce Alignment in Liquid Crystals

    NASA Astrophysics Data System (ADS)

    Harrison, Daniel; Fisch, Michael R.; Petschek, Rolfe G.; Li, J.-F.; Harris, Frank; Korns, Heather

    2002-04-01

    Alignment layers for liquid crystal cells were prepared by directional deposition of high molecular weight rigid-rod ionomers on glass and indium-tin-oxide substrates. Several deposition techniques were developed and tested. Material type, concentration, temperature, and application technique were systematically varied and the resultant alignment of the liquid crystals studied. Three different methods of applying the alignment layer were investigated: directional spray deposition, brushing, and directional deposition using a squeegee (doctor bar). The application temperature ranged from 30 to 80°C. The best results were obtained using a squeegee to perform directional deposition at temperature of less than 60°C. The alignment layers obtained in this way are robust, exhibit excellent alignment, and have pretilt angles of a few degrees.

  2. Composite alignment media for the measurement of independent sets of NMR residual dipolar couplings.

    PubMed

    Ruan, Ke; Tolman, Joel R

    2005-11-01

    The measurement of independent sets of NMR residual dipolar couplings (RDCs) in multiple alignment media can provide a detailed view of biomolecular structure and dynamics, yet remains experimentally challenging. It is demonstrated here that independent sets of RDCs can be measured for ubiquitin using just a single alignment medium composed of aligned bacteriophage Pf1 particles embedded in a strained polyacrylamide gel matrix. Using this composite medium, molecular alignment can be modulated by varying the angle between the directors of ordering for the Pf1 and strained gel matrix, or by varying the ionic strength or concentration of the Pf1 particles. This approach offers significant advantages in that greater experimental control can be exercised over the acquisition of multi-alignment RDC data while a homogeneous chemical environment is maintained across all of the measured RDC data. PMID:16248635

  3. Ultraviolet-light-treated polyimide alignment layers for polarization-independent liquid crystal Fresnel lenses

    NASA Astrophysics Data System (ADS)

    Hwang, S.-J.; Chen, T.-A.; Lin, K.-R.; Jeng, S.-C.

    2012-04-01

    The surface energy of a conventional homeotropic polyimide (PI) alignment layer was altered via ultraviolet (UV) light irradiation, and the pretilt angle of the PI was changed along with the surface energy. The surface energy can be controlled by either UV exposure time or irradiation intensity. A switchable liquid crystal Fresnel lens (LCFL) was created by the UV-treated alignment layers to form a Fresnel zone-distribution hybrid alignment, vertically aligned and hybrid aligned LC in the odd and even zones, respectively. The LCFL was made polarization-independent by circular buffing, and it had a diffraction efficiency of ˜22% at a low driving voltage of ˜1.2 V.

  4. Electrically switchable liquid crystal Fresnel lens using UV-modified alignment film.

    PubMed

    Jeng, Shie-Chang; Hwang, Shug-June; Horng, Jing-Shyang; Lin, Kuo-Ren

    2010-12-01

    A simple method to make a switchable liquid crystal (LC) Fresnel lens with high diffraction efficiency and a low driving voltage was proposed based on the photo-induced surface modification of the vertical alignment layer. UV illumination alters the pretilt angle of alignment layers, a Fresnel zone-distribution hybrid alignment in the homeotropic LC cell can be straightforwardly achieved through UV exposure, yielding a concentric structure of the Fresnel phase LC lens. A remarkable diffraction efficiency of ~31.4%, close to the measured diffraction efficiency of the used Fresnel-zone-plate mask of 32%, was detected using a linearly polarized incident beam. PMID:21164982

  5. Combining Multiple Pairwise Structure-based Alignments

    SciTech Connect

    2014-11-12

    CombAlign is a new Python code that generates a gapped, one-to-many, multiple structure-based sequence alignment(MSSA) given a set of pairwise structure-based alignments. In order to better define regions of similarity among related protein structures, it is useful to detect the residue-residue correspondences among a set of pairwise structure alignments. Few codes exist for constructing a one-to-many, multiple sequence alignment derived from a set of structure alignments, and we perceived a need for creating a new tool for combing pairwise structure alignments that would allow for insertion of gaps in the reference structure.

  6. Alignment method for parabolic trough solar concentrators

    DOEpatents

    Diver, Richard B.

    2010-02-23

    A Theoretical Overlay Photographic (TOP) alignment method uses the overlay of a theoretical projected image of a perfectly aligned concentrator on a photographic image of the concentrator to align the mirror facets of a parabolic trough solar concentrator. The alignment method is practical and straightforward, and inherently aligns the mirror facets to the receiver. When integrated with clinometer measurements for which gravity and mechanical drag effects have been accounted for and which are made in a manner and location consistent with the alignment method, all of the mirrors on a common drive can be aligned and optimized for any concentrator orientation.

  7. Surprise beyond prediction error

    PubMed Central

    Chumbley, Justin R; Burke, Christopher J; Stephan, Klaas E; Friston, Karl J; Tobler, Philippe N; Fehr, Ernst

    2014-01-01

    Surprise drives learning. Various neural “prediction error” signals are believed to underpin surprise-based reinforcement learning. Here, we report a surprise signal that reflects reinforcement learning but is neither un/signed reward prediction error (RPE) nor un/signed state prediction error (SPE). To exclude these alternatives, we measured surprise responses in the absence of RPE and accounted for a host of potential SPE confounds. This new surprise signal was evident in ventral striatum, primary sensory cortex, frontal poles, and amygdala. We interpret these findings via a normative model of surprise. PMID:24700400

  8. Evolution of error diffusion

    NASA Astrophysics Data System (ADS)

    Knox, Keith T.

    1999-10-01

    As we approach the new millennium, error diffusion is approaching the 25th anniversary of its invention. Because of its exceptionally high image quality, it continues to be a popular choice among digital halftoning algorithms. Over the last 24 years, many attempts have been made to modify and improve the algorithm--to eliminate unwanted textures and to extend it to printing media and color. Some of these modifications have been very successful and are in use today. This paper will review the history of the algorithm and its modifications. Three watershed events in the development of error diffusion will be described, together with the lessons learned along the way.

  9. Evolution of error diffusion

    NASA Astrophysics Data System (ADS)

    Knox, Keith T.

    1998-12-01

    As we approach the new millennium, error diffusion is approaching the 25th anniversary of its invention. Because of its exceptionally high image quality, it continues to be a popular choice among digital halftoning algorithms. Over the last 24 years, many attempts have been made to modify and improve the algorithm - to eliminate unwanted textures and to extend it to printing media and color. Some of these modifications have been very successful and are in use today. This paper will review the history of the algorithm and its modifications. Three watershed events in the development of error diffusion will be described, together with the lesions learned along the way.

  10. Error Free Software

    NASA Technical Reports Server (NTRS)

    1985-01-01

    A mathematical theory for development of "higher order" software to catch computer mistakes resulted from a Johnson Space Center contract for Apollo spacecraft navigation. Two women who were involved in the project formed Higher Order Software, Inc. to develop and market the system of error analysis and correction. They designed software which is logically error-free, which, in one instance, was found to increase productivity by 600%. USE.IT defines its objectives using AXES -- a user can write in English and the system converts to computer languages. It is employed by several large corporations.

  11. Correlations of Cervical Sagittal Alignment before and after Occipitocervical Fusion.

    PubMed

    Matsubayashi, Yoshitaka; Shimizu, Takachika; Chikuda, Hirotaka; Takeshita, Katsushi; Oshima, Yasushi; Tanaka, Sakae

    2016-06-01

    Study Design Retrospective radiographic study. Objective To investigate changes and correlations of cervical sagittal alignment including T1 slope before and after occipitocervical corrective surgery. We also investigated the relevance for preoperative planning. Methods We conducted a retrospective radiographic analysis of 27 patients who underwent surgery for occipitocervical deformity. There were 7 men and 20 women with a mean age of 56.0 years. Mean follow-up was 68.0 months (range 24 to 120). The radiographic parameters measured before surgery and at final follow-up included McGregor slope, T1 slope, occipito (O)-C2 angle, O-C7 angle, and C2-C7 angle. Pearson correlation coefficient was used to examine the correlation between the radiographic parameters. Results There was a stronger positive correlation between the T1 slope and the O-C7 angle both preoperatively and postoperatively (r = 0.72 and r = 0.83, respectively) than between the T1 slope and the C2-C7 angle (r = 0.60 and r = 0.76, respectively). The O-C2 angle and C2-C7 angle had inverse correlations to each other both pre- and postoperatively (r =  - 0.50 and -0.45). McGregor slope and T1 slope did not significantly change postoperatively at final follow-up. Increase in O-C2 angle after surgery (mean change, 10.7 degrees) inversely correlated with decrease in postoperative C2-C7 angle (mean change, 12.2 degrees). As result of these complementary changes, O-C7 angle did not statistically change. Conclusions Our results suggest that the O-C7 angle is regulated by T1 slope and the corresponding O-C7 angle is divided into the O-C2 and C2-C7 angles, which have inverse correlation to each other and then maintain McGregor slope (horizontal gaze). PMID:27190739

  12. Grain Alignment in Starless Cores

    NASA Astrophysics Data System (ADS)

    Jones, T. J.; Bagley, M.; Krejny, M.; Andersson, B.-G.; Bastien, P.

    2015-01-01

    We present near-IR polarimetry data of background stars shining through a selection of starless cores taken in the K band, probing visual extinctions up to {{A}V}˜ 48. We find that {{P}K}/{{τ }K} continues to decline with increasing AV with a power law slope of roughly -0.5. Examination of published submillimeter (submm) polarimetry of starless cores suggests that by {{A}V}≳ 20 the slope for P versus τ becomes ˜-1, indicating no grain alignment at greater optical depths. Combining these two data sets, we find good evidence that, in the absence of a central illuminating source, the dust grains in dense molecular cloud cores with no internal radiation source cease to become aligned with the local magnetic field at optical depths greater than {{A}V}˜ 20. A simple model relating the alignment efficiency to the optical depth into the cloud reproduces the observations well.

  13. Testing cosmic microwave background polarization data using position angles

    NASA Astrophysics Data System (ADS)

    Preece, Michael; Battye, Richard A.

    2014-10-01

    We consider a novel null test for contamination which can be applied to cosmic microwave background (CMB) polarization data that involves analysis of the statistics of the polarization position angles. Specifically, we will concentrate on using histograms of the measured position angles to illustrate the idea. Such a test has been used to identify systematics in the NRAO-VLA Sky Survey point source catalogue with an amplitude well below the noise level. We explore the statistical properties of polarization angles in CMB maps. If the polarization angle is not correlated between pixels, then the errors follow a simple √{N_{pix}} law. However, this is typically not the case for CMB maps since these have correlations which result in an increase in the variance as the effective number of independent pixels is reduced. Then, we illustrate how certain classes of systematic errors can result in very obvious patterns in these histograms, and thus that these errors could possibly be identified using this method. We discuss how this idea might be applied in a realistic context, and make a preliminary analysis of the Wilkinson Microwave Anisotropy Probe 7 data, finding evidence of a systematic error in the Q- and W- band data, consistent with a constant offset in Q and U.

  14. Error Modeling of Multi-baseline Optical Truss. Part II; Application to SIM Metrology Truss Field Dependent Error

    NASA Technical Reports Server (NTRS)

    Zhang, Liwei Dennis; Milman, Mark; Korechoff, Robert

    2004-01-01

    The current design of the Space Interferometry Mission (SIM) employs a 19 laser-metrology-beam system (also called L19 external metrology truss) to monitor changes of distances between the fiducials of the flight system's multiple baselines. The function of the external metrology truss is to aid in the determination of the time-variations of the interferometer baseline. The largest contributor to truss error occurs in SIM wide-angle observations when the articulation of the siderostat mirrors (in order to gather starlight from different sky coordinates) brings to light systematic errors due to offsets at levels of instrument components (which include comer cube retro-reflectors, etc.). This error is labeled external metrology wide-angle field-dependent error. Physics-based model of field-dependent error at single metrology gauge level is developed and linearly propagated to errors in interferometer delay. In this manner delay error sensitivity to various error parameters or their combination can be studied using eigenvalue/eigenvector analysis. Also validation of physics-based field-dependent model on SIM testbed lends support to the present approach. As a first example, dihedral error model is developed for the comer cubes (CC) attached to the siderostat mirrors. Then the delay errors due to this effect can be characterized using the eigenvectors of composite CC dihedral error. The essence of the linear error model is contained in an error-mapping matrix. A corresponding Zernike component matrix approach is developed in parallel, first for convenience of describing the RMS of errors across the field-of-regard (FOR), and second for convenience of combining with additional models. Average and worst case residual errors are computed when various orders of field-dependent terms are removed from the delay error. Results of the residual errors are important in arriving at external metrology system component requirements. Double CCs with ideally co-incident vertices

  15. Anatomic Versus Mechanically Aligned Total Knee Arthroplasty for Unicompartmental Knee Arthroplasty Revision

    PubMed Central

    Toliopoulos, Panagiota; LeBlanc, Marc-Andre; Hutt, Jonathan; Lavigne, Martin; Desmeules, Francois; Vendittoli, Pascal-Andre

    2016-01-01

    Objectives: The purpose of this study was to compare the intra-operative benefits and the clinical outcomes from kinematic or mechanical alignment for total knee arthroplasty (TKA) in patients undergoing revision of failed unicompartmental kneel arthroplasty (UKA) to TKA. Methods: Ten revisions were performed with a kinematic alignment technique and 11 with a mechanical alignment. Measurements of the hip-knee-ankle angle (HKA), the lateral distal femoral angle (LDFA), and the medial proximal tibial angle (MPTA) were performed using long-leg radiographs. The need for augments, stems, and constrained inserts was compared between groups. Clinical outcomes were compared using the WOMAC score along with maximum distance walked as well as knee range of motion obtained prior to discharge. All data was obtained by a retrospective review of patient files. Results: The kinematic group required less augments, stems, and constrained inserts than the mechanical group and thinner polyethylene bearings. There were significant differences in the lateral distal femoral angle (LDFA) and the medial proximal tibial angle (MPTA) between the two groups (p<0.05). The mean WOMAC score obtained at discharge was better in the kinematic group as was mean knee flexion. At last follow up of 34 months for the kinematic group and 58 months for the mechanical group, no orthopedic complications or reoperations were recorded. Conclusion: Although this study has a small patient cohort, our results suggest that kinematic alignment for TKA after UKA revision is an attractive method. Further studies are warranted. PMID:27563365

  16. Alignment Test Results of the JWST Pathfinder Telescope Mirrors in the Cryogenic Environment

    NASA Technical Reports Server (NTRS)

    Whitman, Tony L.; Wells, Conrad; Hadaway, James; Knight, J. Scott; Lunt, Sharon

    2016-01-01

    After integration of the Optical Telescope Element (OTE) to the Integrated Science Instrument Module (ISIM) to become the OTIS, the James Webb Space Telescope OTIS is tested at NASAs Johnson Space Center (JSC) in the cryogenic vacuum Chamber A for alignment and optical performance. The alignment of the mirrors comprises a sequence of steps as follows: The mirrors are coarsely aligned using photogrammetry cameras with reflective targets attached to the sides of the mirrors. Then a multi-wavelength interferometer is aligned to the 18-segment primary mirror using cameras at the center of curvature to align reflected light from the segments and using fiducials at the edge of the primary mirror. Once the interferometer is aligned, the 18 primary mirror segments are then adjusted to optimize wavefront error of the aggregate mirror. This process phases the piston and tilt positions of all the mirror segments. An optical fiber placed at the Cassegrain focus of the telescope then emits light towards the secondary mirror to create a collimated beam emitting from the primary mirror. Portions of the collimated beam are retro-reflected from flat mirrors at the top of the chamber to pass through the telescope to the SI detector. The image on the detector is used for fine alignment of the secondary mirror and a check of the primary mirror alignment using many of the same analysis techniques used in the on-orbit alignment. The entire process was practiced and evaluated in 2015 at cryogenic temperature with the Pathfinder telescope.

  17. Alignment of sources and detectors on breast surface for noncontact diffuse correlation tomography of breast tumors

    PubMed Central

    Huang, Chong; Lin, Yu; He, Lian; Irwin, Daniel; Szabunio, Margaret M.; Yu, Guoqiang

    2016-01-01

    Noncontact diffuse correlation tomography (ncDCT) is an emerging technology for 3D imaging of deep tissue blood flow distribution without distorting hemodynamic properties. To adapt the ncDCT for imaging in vivo breast tumors, we designed a motorized ncDCT probe to scan over the breast surface. A computer-aided design (CAD)-based approach was proposed to create solid volume mesh from arbitrary breast surface obtained by a commercial 3D camera. The sources and detectors of ncDCT were aligned on the breast surface through ray tracing to mimic the ncDCT scanning with CAD software. The generated breast volume mesh along with the boundary data of ncDCT at the aligned source and detector pairs were used for finite-element-method-based flow image reconstruction. We evaluated the accuracy of source alignments on mannequin and human breasts; largest alignment errors were less than 10% in both tangential and radial directions of scanning. The impact of alignment errors (assigned 10%) on the tumor reconstruction was estimated using computer simulations. The deviations of simulated tumor location and blood flow contrast resulted from the alignment errors were 0.77 mm (less than the node distance of 1 mm) and 1%, respectively, which result in minor impact on flow image reconstruction. Finally, a case study on a human breast tumor was conducted and a tumor-to-normal flow contrast was reconstructed, demonstrating the feasibility of ncDCT in clinical application. PMID:26479823

  18. Evaluation of lens distortion errors in video-based motion analysis

    NASA Technical Reports Server (NTRS)

    Poliner, Jeffrey; Wilmington, Robert; Klute, Glenn K.; Micocci, Angelo

    1993-01-01

    In an effort to study lens distortion errors, a grid of points of known dimensions was constructed and videotaped using a standard and a wide-angle lens. Recorded images were played back on a VCR and stored on a personal computer. Using these stored images, two experiments were conducted. Errors were calculated as the difference in distance from the known coordinates of the points to the calculated coordinates. The purposes of this project were as follows: (1) to develop the methodology to evaluate errors introduced by lens distortion; (2) to quantify and compare errors introduced by use of both a 'standard' and a wide-angle lens; (3) to investigate techniques to minimize lens-induced errors; and (4) to determine the most effective use of calibration points when using a wide-angle lens with a significant amount of distortion. It was seen that when using a wide-angle lens, errors from lens distortion could be as high as 10 percent of the size of the entire field of view. Even with a standard lens, there was a small amount of lens distortion. It was also found that the choice of calibration points influenced the lens distortion error. By properly selecting the calibration points and avoidance of the outermost regions of a wide-angle lens, the error from lens distortion can be kept below approximately 0.5 percent with a standard lens and 1.5 percent with a wide-angle lens.

  19. Heterodyne Interferometer Angle Metrology

    NASA Technical Reports Server (NTRS)

    Hahn, Inseob; Weilert, Mark A.; Wang, Xu; Goullioud, Renaud

    2010-01-01

    A compact, high-resolution angle measurement instrument has been developed that is based on a heterodyne interferometer. The common-path heterodyne interferometer metrology is used to measure displacements of a reflective target surface. In the interferometer setup, an optical mask is used to sample the measurement laser beam reflecting back from a target surface. Angular rotations, around two orthogonal axes in a plane perpendicular to the measurement- beam propagation direction, are determined simultaneously from the relative displacement measurement of the target surface. The device is used in a tracking telescope system where pitch and yaw measurements of a flat mirror were simultaneously performed with a sensitivity of 0.1 nrad, per second, and a measuring range of 0.15 mrad at a working distance of an order of a meter. The nonlinearity of the device is also measured less than one percent over the measurement range.

  20. Sun angle calculator

    NASA Technical Reports Server (NTRS)

    Flippin, A.; Schmitt, A. L. (Inventor)

    1976-01-01

    A circular computer and system is disclosed for determining the sun angle relative to the horizon from any given place and at any time. The computer includes transparent, rotatably mounted discs on both sides of the circular disc member. Printed on one side of the circular disc member are outer and inner circular sets of indicia respectively representative of site longitude and Greenwich Mean Time. Printed on an associated one of the rotatable discs is a set of indicia representative of Solar Time. Printed on the other side of the circular disc member are parallel lines representative of latitude between diametral representations of North and South poles. Elliptical lines extending between the North and South poles are proportionally disposed on the surface to scale Solar Time in hours.