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Sample records for amazonia central amazonas

  1. Precipitation chemistry in central Amazonia

    NASA Technical Reports Server (NTRS)

    Andreae, M. O.; Talbot, R. W.; Berresheim, H.; Beecher, K. M.

    1990-01-01

    Rain samples from three sites in central Amazonia were collected over a period of 6 weeks during the 1987 wet season and analyzed for ionic species and dissolved organic carbon. A continuous record of precipitation chemistry and amount was obtained at two of these sites, which were free from local or regional pollution, for a time period of over 1 month. The volume-weighted mean concentrations of most species were found to be about a factor of 5 lower during the wet season compared with previous results from the dry season. Only sodium, potassium, and chloride showed similar concentrations in both seasons. When the seasonal difference in rainfall amount is taken into consideration, the deposition fluxes are only slightly lower for most species during the wet season than during the dry season, again with the exception of chloride, potassium, and sodium. Sodium and chloride are present in the same ratio as in sea salt; rapid advection of air masses of marine origin to the central Amazon Basin during the wet season may be responsible for the observed higher deposition flux of these species. Statistical analysis suggests that sulfate is, to a large extent, of marine (sea salt and biogenic) origin, but that long-range transport of combustion-derived aerosols also makes a significant contribution to sulfate and nitrate levels in Amazonian rain. Organic acid concentrations in rain were responsible for a large fraction of the observed precipitation acidity; their concentration was strongly influenced by gas/liquid interactions.

  2. Ocelot (Leopardus pardalis) Density in Central Amazonia.

    PubMed

    Rocha, Daniel Gomes da; Sollmann, Rahel; Ramalho, Emiliano Esterci; Ilha, Renata; Tan, Cedric K W

    2016-01-01

    Ocelots (Leopardus pardalis) are presumed to be the most abundant of the wild cats throughout their distribution range and to play an important role in the dynamics of sympatric small-felid populations. However, ocelot ecological information is limited, particularly for the Amazon. We conducted three camera-trap surveys during three consecutive dry seasons to estimate ocelot density in Amanã Reserve, Central Amazonia, Brazil. We implemented a spatial capture-recapture (SCR) model that shared detection parameters among surveys. A total effort of 7020 camera-trap days resulted in 93 independent ocelot records. The estimate of ocelot density in Amanã Reserve (24.84 ± SE 6.27 ocelots per 100 km2) was lower than at other sites in the Amazon and also lower than that expected from a correlation of density with latitude and rainfall. We also discuss the importance of using common parameters for survey scenarios with low recapture rates. This is the first density estimate for ocelots in the Brazilian Amazon, which is an important stronghold for the species.

  3. Ocelot (Leopardus pardalis) Density in Central Amazonia

    PubMed Central

    da Rocha, Daniel Gomes; Sollmann, Rahel; Ramalho, Emiliano Esterci; Ilha, Renata; Tan, Cedric K. W.

    2016-01-01

    Ocelots (Leopardus pardalis) are presumed to be the most abundant of the wild cats throughout their distribution range and to play an important role in the dynamics of sympatric small-felid populations. However, ocelot ecological information is limited, particularly for the Amazon. We conducted three camera-trap surveys during three consecutive dry seasons to estimate ocelot density in Amanã Reserve, Central Amazonia, Brazil. We implemented a spatial capture-recapture (SCR) model that shared detection parameters among surveys. A total effort of 7020 camera-trap days resulted in 93 independent ocelot records. The estimate of ocelot density in Amanã Reserve (24.84 ± SE 6.27 ocelots per 100 km2) was lower than at other sites in the Amazon and also lower than that expected from a correlation of density with latitude and rainfall. We also discuss the importance of using common parameters for survey scenarios with low recapture rates. This is the first density estimate for ocelots in the Brazilian Amazon, which is an important stronghold for the species. PMID:27191598

  4. Age of depositional and weathering events in Central Amazonia

    NASA Astrophysics Data System (ADS)

    Sant'Anna, Lucy Gomes; Soares, Emílio Alberto do Amaral; Riccomini, Claudio; Tatumi, Sonia Hatsue; Yee, Marcio

    2017-08-01

    In the last three decades, several studies have been devoted to understanding the role of Late Pleistocene-Holocene climate changes in the Amazonia lowlands environment. However, most of these studies used data obtained from sedimentary deposits (lakes, swamps, and colluvium) located away from the central plain or on the edges of the Amazonia region. This article integrates optically stimulated luminescence and accelerated mass spectrometry 14C ages with sedimentological and geomorphological data obtained during this study or compiled from the literature for fluvial and lacustrine deposits of the central alluvial plain of the Solimões-Amazon River. The age data allow us to present a chronological framework for the Late Pleistocene-Holocene deposits and conclude that (i) the dryness of the LGM in central Amazonia lowlands is recorded by the formation of fluvial terraces and their weathering to pedogenic hematite between 25.3 ka and 17.7 ka; (ii) floodplain deposition was contemporaneous with terrace weathering and occurred in a context of decreased water volume in fluvial channels, lowering of river base level and sea level, and isostatic rebound of the continent; and (iii) lateral and mid-channel fluvial bars in the Solimões-Amazon River have a minimum age of 11.5 ± 1.5 ka, and their deposition responded to increased precipitation at the beginning of the Holocene.

  5. Geomorphological evidence of recent tilting in the Central Amazonia Region

    NASA Astrophysics Data System (ADS)

    Ibanez, Delano Menecucci; Riccomini, Claudio; de Miranda, Fernando Pellon

    2014-06-01

    Geomorphometric techniques applied to remote sensing data represent powerful tools as an aid for detecting terrain features produced by recent vertical crustal movements in a variety of landscapes. In this work, geomorphometric analysis of the Central Amazonia drainage network using Shuttle Radar Topography Mission (SRTM) data was carried out to determine surface water loading and tectonic influence on the development of the Uatumã and Urubu river basins since the Miocene. The main objective was to detect geomorphological domains of lateral stream migration and channel sinuosity changes that could indicate recent vertical crustal movement. To achieve this, the Transverse Topographic Symmetry Factor and Sinuosity Index were applied to analyze the study area drainage network. Comparison of the geomorphological domains with structural field data and records of seismicity suggests that they are influenced by subsurface fault reactivation, which coincides in space with faults mapped in outcrops that have activated since the Miocene. This interpretation is corroborated by the spatial correspondence between these faults with domain boundaries and shapes, by river sinuosity change when crossing these boundaries, and by a high concentration of seismic activity along one of these limits. The crustal movement caused by hydrological loading can also influence such geomorphological features. Such is the case of lateral stream migrations of a domain in the opposite sense to the Amazon River flow. This may be a consequence of the more pronounced expression of hydrological loading in the Negro and Solimões river confluence region.

  6. Long term aerosol and trace gas measurements in Central Amazonia

    NASA Astrophysics Data System (ADS)

    Artaxo, Paulo; Barbosa, Henrique M. J.; Ferreira de Brito, Joel; Carbone, Samara; Rizzo, Luciana V.; Andreae, Meinrat O.; Martin, Scot T.

    2016-04-01

    The central region of the Amazonian forest is a pristine region in terms of aerosol and trace gases concentrations. In the wet season, Amazonia is actually one of the cleanest continental region we can observe on Earth. A long term observational program started 20 years ago, and show important features of this pristine region. Several sites were used, between then ATTO (Amazon Tall Tower Observatory) and ZF2 ecological research site, both 70-150 Km North of Manaus, receiving air masses that traveled over 1500 km of pristine tropical forests. The sites are GAW regional monitoring stations. Aerosol chemical composition (OC/EC and trace elements) is being analysed using filters for fine (PM2.5) and coarse mode aerosol as well as Aerodyne ACSM (Aerosol Chemical Speciation Monitors). VOCs are measured using PTR-MS, while CO, O3 and CO2 are routinely measured. Aerosol absorption is being studied with AE33 aethalometers and MAAP (Multi Angle Absorption Photometers). Aerosol light scattering are being measured at several wavelengths using TSI and Ecotech nephelometers. Aerosol size distribution is determined using scanning mobility particle sizer at each site. Lidars measure the aerosol column up to 12 Km providing the vertical profile of aerosol extinction. The aerosol column is measures using AERONET sun photometers. In the wet season, organic aerosol comprises 75-85% of fine aerosol, and sulfate and nitrate concentrations are very low (1-3 percent). Aerosols are dominated by biogenic primary particles as well as SOA from biogenic precursors. Black carbon in the wet season accounts for 5-9% of fine mode aerosol. Ozone in the wet season peaks at 10-12 ppb at the middle of the day, while carbon monoxide averages at 50-80 ppb. Aerosol optical thickness (AOT) is a low 0.05 to 0.1 at 550 nm in the wet season. Sahara dust transport events sporadically enhance the concentration of soil dust aerosols and black carbon. In the dry season (August-December), long range transported

  7. Surface Ozone Enrichment Downwind of Manaus City, in Central Amazonia

    NASA Astrophysics Data System (ADS)

    Carbone, S.; Rizzo, L. V.; Rodrigues, N. P.; Brito, J.; Cirino, G. G.; Souza, R. A. F. D.; Barbosa, H. M.; Artaxo, P.; Martin, S. T.

    2015-12-01

    Amazonia is a unique place to study the impact of anthropogenic emissions on atmospheric photochemistry, fueled by large inputs of solar radiation, humidity, biogenic emissions and turbulent mixing. In the wet season, thousands of km2 of Amazonian forest areas can be considered pristine, whereas in the dry season biomass burning emissions in regional scale add to picture. The Amazon region is also going through localized urban development, in particular, the Manaus city, with 2 million inhabitants. The GoAmazon2014/5 experiment seeks to understand the interactions between urban and biogenic emissions in Amazonia. The combination of biogenic volatile organic compounds and urban NOx emissions is expected to increase tropospheric O3 production, with impacts to the ecosystem and human health. To investigate this issue, surface O3 measurements were taken between Feb and Dec 2014 at two sites in Amazonia: T2, located in the outflow of the Manaus urban plume, and T3, sitting 60 km downwind of the city. The influence of the urban plume at T3 site was detected by a combination of typical ΔCN/ΔCO ratios, Hysplit backtrajectories and threshold concentrations of tracers such as particle number and black carbon. The transport from T2 to T3 typically lasted 7 hours. At T2, the O3 diurnal cycle showed a diurnal peak of 20 ppb in the wet season and of 35 ppb in the dry season, suggesting the contribution of regional biomass burning to O3 photochemical production. In the absence of urban or biomass burning emissions, O3 diurnal cycle at T3 showed a peak of 15 ppb, similar to observations taken in pristine forest areas in Amazonia. When the Manaus plume reached the T3 site in the afternoon, the diurnal O3 peak increased to 40 ppb, indicating a net O3 production rate of 3.6 ppb h-1 along this diurnal transport. When the Manaus plume reached the T3 site before sunrise, i.e., a transport during the night, the diurnal peak was anticipated and reached 25 ppb.

  8. Reconstructing habitats in central Amazonia using megafauna, sedimentology, radiocarbon, and isotope analyses

    NASA Astrophysics Data System (ADS)

    de Fátima Rossetti, Dilce; de Toledo, Peter Mann; Moraes-Santos, Heloísa Maria; de Araújo Santos, Antônio Emídio

    2004-05-01

    A paleomegafauna site from central Amazonia with exceptional preservation of mastodons and ground sloths allows for the first time a precise age control based on 14C analysis, which, together with sedimentological and δ 13C isotope data, provided the basis to discuss habitat evolution within the context of climate change during the past 15,000 yr. The fossil-bearing deposits, trapped within a depression in the Paleozoic basement, record three episodes of sedimentation formed on floodplains, with an intermediate unit recording a catastrophic deposition through debris flows, probably favored during fast floodings. The integrated approach presented herein supports a change in humidity in central Amazonia through the past 15,000 yr, with a shift from drier to arboreal savanna at 11,340 (±50) 14C yr B.P. and then to a dense forest like we see today at 4620 (±60) 14C yr B.P.

  9. [Keys to families and genera of gerromorpha and nepomorpha (Insecta: Heteroptera) in the central Amazonia, Brazil].

    PubMed

    Pereira, Domingos L V; de Melo, Alan L; Hamada, Neusa

    2007-01-01

    Few studies have been done in Brazil on aquatic and semi-aquatic Gerromorpha and Nepomorpha (Heteroptera), Minas Gerais being the state where these insects have been studied the most. The present study presents keys for identification of Gerromorpha and Nepomorpha adults, thus providing a tool for ecological studies on aquatic insects in Central Amazonia. The specimens used to elaborate the taxonomic keys were collected in Presidente Figueiredo county in streams and artificial lakes and in Manaus county in streams, white-water floodplain (várzea) lakes and Rio Negro black-water flooded forest (igapó). Specimens from the invertebrate collection of the Instituto Nacional de Pesquisas da Amazonia (INPA) were also examined and included in the keys. Thirty one genera from 13 families of the infra-orders mentioned.

  10. Aerosol chemistry during the wet season in central Amazonia - The influence of long-range transport

    NASA Technical Reports Server (NTRS)

    Talbot, R. W.; Andreae, M. O.; Berresheim, H.; Artaxo, P.; Garstang, M.

    1990-01-01

    The temporal variation in the concentration and chemistry of the atmospheric aerosol over central Amazonia, Brazil, during the 1987 wet season is discussed based on ground and aircraft collected data obtained during the NASA GTE ABLE 2B expedition conducted in April/May 1987. It is found that wet-season aerosol concentrations and composition are variable in contrast to the more uniform biogenic aerosol observed during the 1985 dry season; four distinct intervals of enhanced aerosol concentration coincided with short periods (3 to 5 d) of extensive rainfall. It is hypothesized that aerosol chemistry in Amazonia during the wet season is strongly influenced by long-range transport of soil dust, marine aerosol, and possibly biomass combustion products advected into the central Basin by large-scale tropospheric circulation, producing periodic pulses of material input to local boundary layer air. The resultant wet-season aerosol regime is dynamic, in contrast to the uniformity of natural biogenic aerosols during the dry season.

  11. Rainfall and surface kinematic conditions over central amazonia during ABLE 2B

    NASA Technical Reports Server (NTRS)

    Greco, Steven; Swap, Robert; Garstang, Michael; Ulanski, Stanley; Shipham, Mark

    1990-01-01

    Rainfall, rainfall systems, and surface kinematics of the central Amazon basin wet season are investigated using meteorological and chemical data collected during the wet season Amazon Boundary Layer Experiment (ABLE) near Manaus, Brazil. Through analysis of (GOES-West) imagery, it is determined that, based on location of the initial development, there are three main types of convective systems which influence a mesoscale network near Manaus, namely the Coastal Occurring Systems (COS), the Basin Occurring Systems (BOS), and the Locally Occurring Systems (LOS). Chemical analysis of rainwater delivered by these systems shows significant differences in concentrations of formate, acetate, pyruvate, sulfate, and hydrogen ion, and measurements of aerosol concentrations near Manaus show large influxes of aerosols into central Amazonia after passage of BOS and COS. Results of satellite based classification of the rain-producing systems are discussed.

  12. Pre-Columbian floristic legacies in modern homegardens of Central Amazonia.

    PubMed

    Lins, Juliana; Lima, Helena P; Baccaro, Fabricio B; Kinupp, Valdely F; Shepard, Glenn H; Clement, Charles R

    2015-01-01

    Historical ecologists have demonstrated legacy effects in apparently wild landscapes in Europe, North America, Mesoamerica, Amazonia, Africa and Oceania. People live and farm in archaeological sites today in many parts of the world, but nobody has looked for the legacies of past human occupations in the most dynamic areas in these sites: homegardens. Here we show that the useful flora of modern homegardens is partially a legacy of pre-Columbian occupations in Central Amazonia: the more complex the archaeological context, the more variable the floristic composition of useful native plants in homegardens cultivated there today. Species diversity was 10% higher in homegardens situated in multi-occupational archaeological contexts compared with homegardens situated in single-occupational ones. Species heterogeneity (β-diversity) among archaeological contexts was similar for the whole set of species, but markedly different when only native Amazonian species were included, suggesting the influence of pre-conquest indigenous occupations on current homegarden species composition. Our findings show that the legacy of pre-Columbian occupations is visible in the most dynamic of all agroecosystems, adding another dimension to the human footprint in the Amazonian landscape.

  13. Pre-Columbian Floristic Legacies in Modern Homegardens of Central Amazonia

    PubMed Central

    Lins, Juliana; Lima, Helena P.; Baccaro, Fabricio B.; Kinupp, Valdely F.; Shepard, Glenn H.; Clement, Charles R.

    2015-01-01

    Historical ecologists have demonstrated legacy effects in apparently wild landscapes in Europe, North America, Mesoamerica, Amazonia, Africa and Oceania. People live and farm in archaeological sites today in many parts of the world, but nobody has looked for the legacies of past human occupations in the most dynamic areas in these sites: homegardens. Here we show that the useful flora of modern homegardens is partially a legacy of pre-Columbian occupations in Central Amazonia: the more complex the archaeological context, the more variable the floristic composition of useful native plants in homegardens cultivated there today. Species diversity was 10% higher in homegardens situated in multi-occupational archaeological contexts compared with homegardens situated in single-occupational ones. Species heterogeneity (β-diversity) among archaeological contexts was similar for the whole set of species, but markedly different when only native Amazonian species were included, suggesting the influence of pre-conquest indigenous occupations on current homegarden species composition. Our findings show that the legacy of pre-Columbian occupations is visible in the most dynamic of all agroecosystems, adding another dimension to the human footprint in the Amazonian landscape. PMID:26030879

  14. Genetic structure of traditional varieties of bitter manioc in three soils in Central Amazonia.

    PubMed

    Alves-Pereira, Alessandro; Peroni, Nivaldo; Abreu, Aluana Gonçalves; Gribel, Rogério; Clement, Charles R

    2011-10-01

    Manioc is the most important food crop that originated in Amazonia. Many studies have increased our understanding of its evolutionary dynamics under cultivation. However, most of them focused on manioc cultivation in environments with low soil fertility, generally Oxisols. Recent ethnobotanical observations showed that bitter manioc also performs well in high fertility soils, such as Amazonian dark earths (ADE) and the floodplain. We used 10 microsatellite loci to investigate the genetic diversity and structure of bitter manioc varieties grown in different soil types in communities of smallholder farmers along the middle Madeira River in Central Amazonia. The genetic diversity of some sweet varieties and seedlings was also evaluated. Adult individuals showed higher levels of genetic diversity and smaller inbreeding coefficients (A ( R ) = 5.52, H ( O ) = 0.576, f = 0.086) than seedlings (A ( R ) = 4.39, H ( O ) = 0.421, f = 0.242). Bitter manioc varieties from the floodplain showed higher levels of genetic diversity (A ( R ) = 5.19, H ( O ) = 0.606) than those from ADE (A ( R ) = 4.45, H ( O ) = 0.538) and from Oxisols (A ( R ) = 4.15, H ( O ) = 0.559). The varieties grown in the floodplain were strongly differentiated from the varieties grown in Oxisols (F ( ST ) = 0.093) and ADE (F ( ST ) = 0.108), suggesting important genetic structuring among varieties grown in the floodplain and upland soils (ADE and Oxisols). This is the first time that genetic divergence of bitter manioc varieties in cultivation in different Amazonian soils in a small geographic area is reported.

  15. BR-319: Brazil's Manaus-Porto Velho highway and the potential impact of linking the arc of deforestation to central amazonia.

    PubMed

    Fearnside, Philip M; de Alencastro Graça, Paulo Maurício Lima

    2006-11-01

    Brazil's BR-319 Highway linked Manaus, in the state of Amazonas, to Porto Velho, Rondônia, until it became impassable in 1988. Now it is proposed for reconstruction and paving, which would facilitate migration from the "Arc of Deforestation" in the southern part of the Amazon region to new frontiers farther north. The purpose of the highway, which is to facilitate transport to São Paulo of products from factories in the Manaus Free Trade Zone, would be better served by sending the containers by ship to the port of Santos. The lack of a land connection to Manaus currently represents a significant barrier to migration to central and northern Amazonia. Discourse regarding the highway systematically overestimates the highway's benefits and underestimates its impacts. A variety of changes would be needed prior to paving the highway if these potential impacts are to be attenuated. These include zoning, reserve creation, and increased governance in various forms, including deforestation licensing and control programs. More fundamental changes are also needed, especially the abandonment of the long-standing tradition in Brazil of granting squatters' rights to those who invade public land. Organizing Amazonian occupation in such a way that road construction and improvement cease to lead to explosive and uncontrolled deforestation should be a prerequisite for approval of the BR-319 and other road projects for which major impacts are expected. These projects could provide the impetus that is needed to achieve the transition away from appropriation of public land by both small squatters and by grileiros (large-scale illegal claimants). A delay in reconstructing the highway is advisable until appropriate changes can be effected.

  16. Responses of Aquatic Saproxylic Macroinvertebrates to Reduced-Impact Logging in Central Amazonia.

    PubMed

    Roque, F O; Escarpinati, S C; Valente-Neto, F; Hamada, N

    2015-08-01

    Reduced-impact logging (RIL) is an alternative land use because it reduces damage to forest cover in comparison with clear-cut practices. However, management practices adopted in RIL can affect wood availability and, consequently, fauna associated with dead wood during part of their life cycle (saproxylic). In this study, we evaluated whether aquatic saproxylic macroinvertebrates are affected by reduced-impact logging in Central Amazonia. We selected six streams in areas under reduced-impacted logging and six in primary forest areas and collected submerged woody debris. We did not find any differences in water pH, conductivity, and wood availability between reduced-impacted forest and primary forest streams. We found 248 saproxylic aquatic macroinvertebrates belonging to 37 taxa. We found five wood specialist (Dryops, Lutrochus, Stenochironomus, Oukuriella, and Endotribelos) and 32 generalists, totalling 98 and 150 individuals, respectively. In general, our results show that reduced-impact logging does not affect richness, abundance, and composition of saproxylic macroinvertebrates. The main explanation for this pattern is that management practices do not change important macroinvertebrate niche dimensions, including wood availability and the water's chemical and physical variables. Thus, controlled logging, such as applied in the area of the Central Amazonian streams studied, opens a new prospect for insect conservation and commercial exploitation of wood, which is not possible when clear-cut practices are adopted.

  17. [Nesting habitat characterization for Amazona oratrix (Psittaciformes: Psittacidae) in the Central Pacific, Mexico].

    PubMed

    Monterrubio-Rico, Tiberio C; Álvarez-Jara, Margarito; Tellez-Garcia, Loreno; Tena-Morelos, Carlos

    2014-09-01

    The nesting requirements of the Yellow-headed Parrot (Amazona oratrix) are poorly understood, despite their broad historical distribution, high demand for pet trade and current endangered status. Information concerning their nesting requirements is required in order to design specific restoration and conser- vation actions. To assess this, we studied their nesting ecology in the Central Pacific, Michoacan, Mexico during a ten year period. The analyzed variables ranged from local scale nest site characteristics such as nesting tree species, dimensions, geographic positions, diet and nesting forest patches structure, to large scale features such as vegetation use and climatic variables associated to the nesting tree distributions by an ecological niche model using Maxent. We also evaluated the parrot tolerance to land management regimes, and compared the Pacific nest trees with 18 nest trees recorded in an intensively managed private ranch in Tamaulipas, Gulf of Mexico. Parrots nested in tall trees with canopy level cavities in 92 nest-trees recorded from 11 tree species. The 72.8% of nesting occurred in trees of Astronium graveolens, and Enterolobium cyclocarpum which qualified as key- stone trees. The forests where the parrots nested, presented a maximum of 54 tree species, 50% of which were identified as food source; besides, these areas also had a high abundance of trees used as food supply. The lowest number of tree species and trees to forage occurred in an active cattle ranch, whereas the highest species rich- ness was observed in areas with natural recovery. The nesting cavity entrance height from above ground of the Pacific nesting trees resulted higher than those found in the Gulf of Mexico. We hypothesize that the differences may be attributed to Parrot behavioral differences adapting to differential poaching pressure and cavity avail- ability. Nesting trees were found in six vegetation types; however the parrots preferred conserved and riparian semi

  18. Aerosol and precipitation chemistry in a remote site in Central Amazonia: the role of biogenic contribution

    NASA Astrophysics Data System (ADS)

    Pauliquevis, T.; Lara, L. L.; Antunes, M. L.; Artaxo, P.

    2007-08-01

    A long-term (2-3 years) measurement of aerosol and precipitation chemistry was carried out in a remote site in Central Amazonia, Balbina, (1°55' S, 59°29' W, 174 m above sea level), about 200 km north of Manaus city. Aerosols were sampled using stacked filter units (SFU), which separate fine (d<2.5 μm) and coarse mode (2.5 μm

  19. Patterns of orchid bee species diversity and turnover among forested plateaus of central Amazonia.

    PubMed

    Antonini, Yasmine; Machado, Carolina de Barros; Galetti, Pedro Manoel; Oliveira, Marcio; Dirzo, Rodolfo; Fernandes, Geraldo Wilson

    2017-01-01

    The knowledge of spatial pattern and geographic beta-diversity is of great importance for biodiversity conservation and interpreting ecological information. Tropical forests, especially the Amazon Rainforest, are well known for their high species richness and low similarity in species composition between sites, both at local and regional scales. We aimed to determine the effect and relative importance of area, isolation and climate on species richness and turnover in orchid bee assemblages among plateaus in central Brazilian Amazonia. Variance partitioning techniques were applied to assess the relative effects of spatial and environmental variables on bee species richness, phylogeny and composition. We hypothesized that greater abundance and richness of orchid bees would be found on larger plateaus, with a set of core species occurring on all of them. We also hypothesized that smaller plateaus would possess lower phylogenetic diversity. We found 55 bee species distributed along the nine sampling sites (plateaus) with 17 of them being singletons. There was a significant decrease in species richness with decreasing size of plateaus, and a significant decrease in the similarity in species composition with greater distance and climatic variation among sampling sites. Phylogenetic diversity varied among the sampling sites but was directly related to species richness. Although not significantly related to plateau area, smaller or larger PDFaith were observed in the smallest and the largest plateaus, respectively.

  20. Patterns of orchid bee species diversity and turnover among forested plateaus of central Amazonia

    PubMed Central

    Machado, Carolina de Barros; Galetti, Pedro Manoel; Oliveira, Marcio; Dirzo, Rodolfo; Fernandes, Geraldo Wilson

    2017-01-01

    The knowledge of spatial pattern and geographic beta-diversity is of great importance for biodiversity conservation and interpreting ecological information. Tropical forests, especially the Amazon Rainforest, are well known for their high species richness and low similarity in species composition between sites, both at local and regional scales. We aimed to determine the effect and relative importance of area, isolation and climate on species richness and turnover in orchid bee assemblages among plateaus in central Brazilian Amazonia. Variance partitioning techniques were applied to assess the relative effects of spatial and environmental variables on bee species richness, phylogeny and composition. We hypothesized that greater abundance and richness of orchid bees would be found on larger plateaus, with a set of core species occurring on all of them. We also hypothesized that smaller plateaus would possess lower phylogenetic diversity. We found 55 bee species distributed along the nine sampling sites (plateaus) with 17 of them being singletons. There was a significant decrease in species richness with decreasing size of plateaus, and a significant decrease in the similarity in species composition with greater distance and climatic variation among sampling sites. Phylogenetic diversity varied among the sampling sites but was directly related to species richness. Although not significantly related to plateau area, smaller or larger PDFaith were observed in the smallest and the largest plateaus, respectively. PMID:28410432

  1. Rainfall and surface kinematic conditions over central Amazonia during ABLE 2B

    SciTech Connect

    Greco, S.; Swap, R.; Garstang, M.; Ulanski, S.; Shipham, M. ); Harriss, R.C.; Talbot, R. ); Andreae, M.O. ); Artaxo, P. )

    1990-09-20

    Meteorological and chemical data collected during the wet season Amazon Boundary Layer Experiment near Manaus, Brazil, are used to investigate the rainfall, rainfall systems,and surface kinematics of the central Amazon basin wet season. Analysis of the Geostationary Operational Environmental Satellite (GOES-West) imagery indicates that, based on location of initial development, there are three main types of convective systems which influence a mesoscale network near Manaus. Coastal Occurring Systems (COS) are mesoscale to synoptic scale sized systems of generally linear orientation which form along the northern coast of Brazil and propagate across the Amazon basin. The Basin Occurring Systems (BOS) form in the basin east and north of Manaus and also propagate toward the network. Locally Occurring Systems (LOS) form in and around the mesoscale network and rarely are larger than 1,000 km{sup 2}. Composites of hourly rainfall totals and satellite-derived cloud cover show that rainfall and cloudiness associated with COS occurred in the network between 1,400 and 1,800 UT, while BOS rainfall was most common between 1,000 and 1,400 UT. Little rain or cloud cover was seen before 1,600 UT during days influenced by LOS. Chemical analysis of the rainwater delivered by these systems also shows significant differences in the concentrations of formate, acetate, pyruvate, sulfate, and hydrogen ion. In addition, aerosol concentrations measured near Manaus indicate large influxes of aerosols (sodium, chlorine, and silicon) into central Amazonia after the passage of BOS and COS. During April 11-20, BOS occurred on 8 days and produced 98% of the rainfall. Eight COS occurred during April 21 to May 3 and accounted for 89% of the rainfall. The final part of the experiment, May 4-14, was influenced solely by LOS.

  2. Diurnal Variation of CO2 concentration above a tropical reservoir in the central Amazonia

    NASA Astrophysics Data System (ADS)

    do Vale, R. S.; Santana, R. A. S. D.; Tota, J.; Souza, R. A. F. D.; Miller, S. D.

    2014-12-01

    The tropical reservoirs of hydroeletric plants have an important role in greenhouse gas emissions into the atmosphere. Due to the large extension of the reservoirs, the lake breeze or land breeze can influence the transport and dispersion of gases. The Balbina reservoir (59° 28' 50'' W, 1° 53' 25''; S), located near Manaus-AM in central Amazonia, is the second biggest hydroeletric plant resevoir in the Amazon basin and has a flooded area of 1770 km2 with an average depth of 10 m, which is enough to produce a dynamic land-lake breeze. In this reservoir, we measured wind direction and velocity from a meteorological buoy and carbon dioxide (CO2) concentrations at 2 m above the lake surface with a high frequency sensor, from 18th to 19th July/2013. The CO2 concentrations were measured at 10 Hz and data were averaged every 5 min during 32 hours. The lake breeze and land breeze from the forest around the lake showed a well-defined behavior, the lake breeze being predominantly from south (S) and the land breeze predominantly from north (N). The CO2 concentration averages were 392 and 426 ppm for daytime and nighttime, respectively. During daytime the atmosphere above the lake was well mixed due to unstable stratification and moderately strong wind speeds. The accumulation of CO2 concentration above the lake at night may have been affected by low wind speeds and enhanced CO2 flux from the water surface due to buoyancy-induced turbulence and physical processes that brought high-CO2 water to the surface. Advection of CO2 from the adjacent forest (land breeze) was also possible.

  3. Molecular composition of organic aerosols in central Amazonia: an ultra-high-resolution mass spectrometry study

    NASA Astrophysics Data System (ADS)

    Kourtchev, Ivan; Godoi, Ricardo H. M.; Connors, Sarah; Levine, James G.; Archibald, Alex T.; Godoi, Ana F. L.; Paralovo, Sarah L.; Barbosa, Cybelli G. G.; Souza, Rodrigo A. F.; Manzi, Antonio O.; Seco, Roger; Sjostedt, Steve; Park, Jeong-Hoo; Guenther, Alex; Kim, Saewung; Smith, James; Martin, Scot T.; Kalberer, Markus

    2016-09-01

    The Amazon Basin plays key role in atmospheric chemistry, biodiversity and climate change. In this study we applied nanoelectrospray (nanoESI) ultra-high-resolution mass spectrometry (UHRMS) for the analysis of the organic fraction of PM2.5 aerosol samples collected during dry and wet seasons at a site in central Amazonia receiving background air masses, biomass burning and urban pollution. Comprehensive mass spectral data evaluation methods (e.g. Kendrick mass defect, Van Krevelen diagrams, carbon oxidation state and aromaticity equivalent) were used to identify compound classes and mass distributions of the detected species. Nitrogen- and/or sulfur-containing organic species contributed up to 60 % of the total identified number of formulae. A large number of molecular formulae in organic aerosol (OA) were attributed to later-generation nitrogen- and sulfur-containing oxidation products, suggesting that OA composition is affected by biomass burning and other, potentially anthropogenic, sources. Isoprene-derived organosulfate (IEPOX-OS) was found to be the most dominant ion in most of the analysed samples and strongly followed the concentration trends of the gas-phase anthropogenic tracers confirming its mixed anthropogenic-biogenic origin. The presence of oxidised aromatic and nitro-aromatic compounds in the samples suggested a strong influence from biomass burning especially during the dry period. Aerosol samples from the dry period and under enhanced biomass burning conditions contained a large number of molecules with high carbon oxidation state and an increased number of aromatic compounds compared to that from the wet period. The results of this work demonstrate that the studied site is influenced not only by biogenic emissions from the forest but also by biomass burning and potentially other anthropogenic emissions from the neighbouring urban environments.

  4. Mapping hydrological environments in central Amazonia: ground validation and surface model based on SRTM DEM data corrected for deforestation

    NASA Astrophysics Data System (ADS)

    Moulatlet, G. M.; Rennó, C. D.; Costa, F. R. C.; Emilio, T.; Schietti, J.

    2014-07-01

    One of the most important freely available digital elevation models (DEMs) for Amazonia is the one obtained by the Shuttle Radar Topography Mission (SRTM). However, since SRTM tends to represent the vegetation surface instead of the ground surface, the broad use of SRTM DEM as a framework for terrain description in Amazonia is hampered by the presence of deforested areas. We present here two datasets: (1) a deforestation-corrected SRTM DEM for the interfluve between the Purus and Madeira rivers, in central Amazonia, which passed through a careful identification of different environments and has deforestation features corrected by a new method of increasing pixel values of the DEM; and (2) a set of eighteen hydrological-topographic descriptors based on the corrected SRTM DEM. The hydrological-topographic description was generated by the Height Above the Nearest Drainage (HAND) algorithm, which normalizes the terrain elevation (a.s.l.) by the elevation of the nearest hydrologically connected drainage. The validation of the HAND dataset was done by in situ hydrological description of 110 km of walking trails also available in this dataset. The new SRTM DEM expands the applicability of SRTM data for landscape modelling; and the datasets of hydrological features based on topographic modelling is undoubtedly appropriate for ecological modelling and an important contribution for environmental mapping of Amazonia. The deforestation-corrected SRTM DEM is available at http://ppbio.inpa.gov.br/knb/metacat/naman.318.3/ppbio; the polygons selected for deforestation correction are available at http://ppbio.inpa.gov.br/knb/metacat/naman.317.3/ppbio; the set of hydrological-topographic descriptors is available at

  5. High genetic diversity among and within bitter manioc varieties cultivated in different soil types in Central Amazonia

    PubMed Central

    Alves-Pereira, Alessandro; Peroni, Nivaldo; Cavallari, Marcelo Mattos; Lemes, Maristerra R.; Zucchi, Maria Imaculada; Clement, Charles R.

    2017-01-01

    Abstract Although manioc is well adapted to nutrient-poor Oxisols of Amazonia, ethnobotanical observations show that bitter manioc is also frequently cultivated in the highly fertile soils of the floodplains and Amazonian dark earths (ADE) along the middle Madeira River. Because different sets of varieties are grown in each soil type, and there are agronomic similarities between ADE and floodplain varieties, it was hypothesized that varieties grown in ADE and floodplain were more closely related to each other than either is to varieties grown in Oxisols. We tested this hypothesis evaluating the intra-varietal genetic diversity and the genetic relationships among manioc varieties commonly cultivated in Oxisols, ADE and floodplain soils. Genetic results did not agree with ethnobotanical expectation, since the relationships between varieties were variable and most individuals of varieties with the same vernacular name, but grown in ADE and floodplain, were distinct. Although the same vernacular name could not always be associated with genetic similarities, there is still a great amount of variation among the varieties. Many ecological and genetic processes may explain the high genetic diversity and differentiation found for bitter manioc varieties, but all contribute to the maintenance and amplification of genetic diversity within the manioc in Central Amazonia. PMID:28399193

  6. High genetic diversity among and within bitter manioc varieties cultivated in different soil types in Central Amazonia.

    PubMed

    Alves-Pereira, Alessandro; Peroni, Nivaldo; Cavallari, Marcelo Mattos; Lemes, Maristerra R; Zucchi, Maria Imaculada; Clement, Charles R

    2017-04-10

    Although manioc is well adapted to nutrient-poor Oxisols of Amazonia, ethnobotanical observations show that bitter manioc is also frequently cultivated in the highly fertile soils of the floodplains and Amazonian dark earths (ADE) along the middle Madeira River. Because different sets of varieties are grown in each soil type, and there are agronomic similarities between ADE and floodplain varieties, it was hypothesized that varieties grown in ADE and floodplain were more closely related to each other than either is to varieties grown in Oxisols. We tested this hypothesis evaluating the intra-varietal genetic diversity and the genetic relationships among manioc varieties commonly cultivated in Oxisols, ADE and floodplain soils. Genetic results did not agree with ethnobotanical expectation, since the relationships between varieties were variable and most individuals of varieties with the same vernacular name, but grown in ADE and floodplain, were distinct. Although the same vernacular name could not always be associated with genetic similarities, there is still a great amount of variation among the varieties. Many ecological and genetic processes may explain the high genetic diversity and differentiation found for bitter manioc varieties, but all contribute to the maintenance and amplification of genetic diversity within the manioc in Central Amazonia.

  7. Seasonality of isoprenoid emissions from a primary rainforest in central Amazonia

    NASA Astrophysics Data System (ADS)

    Alves, Eliane G.; Jardine, Kolby; Tota, Julio; Jardine, Angela; Yãnez-Serrano, Ana Maria; Karl, Thomas; Tavares, Julia; Nelson, Bruce; Gu, Dasa; Stavrakou, Trissevgeni; Martin, Scot; Artaxo, Paulo; Manzi, Antonio; Guenther, Alex

    2016-03-01

    Tropical rainforests are an important source of isoprenoid and other volatile organic compound (VOC) emissions to the atmosphere. The seasonal variation of these compounds is however still poorly understood. In this study, vertical profiles of mixing ratios of isoprene, total monoterpenes and total sesquiterpenes, were measured within and above the canopy, in a primary rainforest in central Amazonia, using a proton transfer reaction - mass spectrometer (PTR-MS). Fluxes of these compounds from the canopy into the atmosphere were estimated from PTR-MS measurements by using an inverse Lagrangian transport model. Measurements were carried out continuously from September 2010 to January 2011, encompassing the dry and wet seasons. Mixing ratios were higher during the dry (isoprene - 2.68 ± 0.9 ppbv, total monoterpenes - 0.67 ± 0.3 ppbv; total sesquiterpenes - 0.09 ± 0.07 ppbv) than the wet season (isoprene - 1.66 ± 0.9 ppbv, total monoterpenes - 0.47 ± 0.2 ppbv; total sesquiterpenes - 0.03 ± 0.02 ppbv) for all compounds. Ambient air temperature and photosynthetically active radiation (PAR) behaved similarly. Daytime isoprene and total monoterpene mixing ratios were highest within the canopy, rather than near the ground or above the canopy. By comparison, daytime total sesquiterpene mixing ratios were highest near the ground. Daytime fluxes varied significantly between seasons for all compounds. The maximums for isoprene (2.53 ± 0.5 µmol m-2 h-1) and total monoterpenes (1.77 ± 0.05 µmol m-2 h-1) were observed in the late dry season, whereas the maximum for total sesquiterpenes was found during the dry-to-wet transition season (0.77 ± 0.1 µmol m-2 h-1). These flux estimates suggest that the canopy is the main source of isoprenoids emitted into the atmosphere for all seasons. However, uncertainties in turbulence parameterization near the ground could affect estimates of fluxes that come from the ground. Leaf phenology seemed to be an important driver of seasonal

  8. Geochemistry of Central Atlantic Magmatic Province (CAMP) sills from deep boreholes in the Amazonas and Solimões basins, Brazil

    NASA Astrophysics Data System (ADS)

    Hatlen Heimdal, Thea; Svensen, Henrik H.; Pereira, Egberto; Planke, Sverre

    2016-04-01

    The Central Atlantic Magmatic Province (CAMP) is one of the most extensive Large Igneous Provinces (LIPs), and is associated with the breakup of Pangea and the subsequent opening of the central Atlantic Ocean. A large part of the province, including > 1 M km2 basins containing sill intrusions, is located in Brazil but has received limited attention due to the lack of outcrops. We have studied CAMP sills from seven deep boreholes (up to 3100 m deep) in the Amazonas and Solimões basins, northern Brazil. The boreholes contain up to ~ 482 m of sills (18 % of the stratigraphy), with a maximum individual sill thickness of 140 m. The sills were partly emplaced into thick Carboniferous evaporites. The main mineral phases of the sills include plagioclase and pyroxene, with accessory apatite, biotite, ilmenite and quartz. The majority of the sills are low-Ti dolerites (TiO2 < 2 wt.%), with the exception of four samples (with 2.2 - 3.3 wt.% TiO2). The low-Ti rocks range from basalt to basaltic andesite and plot in the tholeiitic field defined within the total alkali versus silica (TAS) classification. C1 chondrite normalized Rare Earth Element (REE) patterns for both Ti-groups show increasing LREE compared to HREE (La/Lu = 2.2 - 4.1) with no major anomalies, and attest to a relatively evolved nature (La = 17-65 ppm). Primitive mantle normalized patterns for low-Ti rocks show negative anomalies for Nb, Ta, P and Ti and positive for K, whereas the high-Ti rocks show generally opposite anomalies. Late stage patches in the dolerites contain apatite, quartz and Cl-bearing biotite, suggesting the presence of halogens that may partly derive from the host sedimentary rocks.

  9. Mapping hydrological environments in central Amazonia: ground validation and surface model based on SRTM DEM data corrected for deforestation

    NASA Astrophysics Data System (ADS)

    Moulatlet, G. M.; Rennó, C. D.; Costa, F. R. C.; Emilio, T.; Schietti, J.

    2015-03-01

    One of the most important freely available digital elevation models (DEMs) for Amazonia is the one obtained by the Shuttle Radar Topography Mission (SRTM). However, since SRTM tends to represent the vegetation surface instead of the ground surface, the broad use of SRTM DEM as a framework for terrain description in Amazonia is hampered by the presence of deforested areas. We present here two data sets: (1) a deforestation-corrected SRTM DEM for the interfluve between the Purus and Madeira rivers, in central Amazonia, which passed through a careful identification of different environments and has deforestation features corrected by a new method of increasing pixel values of the DEM (Rennó, 2009); and (2) a set of 18 hydrological-topographic descriptors based on the corrected SRTM DEM. Deforestation features are related with the opening of an 800 km road in the central part of the interfluve and occupancy of its vicinity. We used topographic profiles from the pristine forest to the deforested feature to evaluate the recovery of the original canopy coverage by minimizing canopy height variation (corrections ranged from 1 to 38 m). The hydrological-topographic description was obtained by the Height Above the Nearest Drainage (HAND) algorithm, which normalizes the terrain elevation (above sea level) by the elevation of the nearest hydrologically connected drainage. The validation of the HAND data set was done by in situ hydrological description of 110 km of walking trails also available in this data set. The new SRTM DEM expands the applicability of SRTM data for landscape modelling; the data sets of hydrological features based on topographic modelling are undoubtedly appropriate for ecological modelling and an important contribution to environmental mapping of Amazonia. The deforestation-corrected SRTM DEM is available at http://ppbio.inpa.gov.br/knb/metacat/naman.318.3/ppbio; the

  10. Convergent adaptations: bitter manioc cultivation systems in fertile anthropogenic dark earths and floodplain soils in Central Amazonia.

    PubMed

    Fraser, James Angus; Alves-Pereira, Alessandro; Junqueira, André Braga; Peroni, Nivaldo; Clement, Charles Roland

    2012-01-01

    Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for

  11. Convergent Adaptations: Bitter Manioc Cultivation Systems in Fertile Anthropogenic Dark Earths and Floodplain Soils in Central Amazonia

    PubMed Central

    Fraser, James Angus; Alves-Pereira, Alessandro; Junqueira, André Braga; Peroni, Nivaldo; Clement, Charles Roland

    2012-01-01

    Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for

  12. Diversity of sandflies (Psychodidae: Phlebotominae) captured in sandstone caves from Central Amazonia, Brazil.

    PubMed

    Alves, Veracilda Ribeiro; Freitas, Rui Alves de; Santos, Francisco Lima; Barrett, Toby Vincent

    2011-05-01

    In the present paper we describe the diversity of phlebotomine sandflies collected in three sandstone caves in the municipality of Presidente Figueiredo, state of Amazonas, Brazil. The phlebotomines were captured during 2006 with CDC light traps. Guano samples from inside the Gruta Refúgio do Maruaga were collected to investigate the presence of immature specimens. A total of 2,160 adult phlebotomines representing 15 species were captured. Pintomyia pacae was the dominant species in Gruta dos Animais (1,723 specimens) and Gruta dos Lages (50 specimens) and Deanemyia maruaga new comb (280 specimens) was the dominant species in Gruta Refúgio do Maruaga. A total of 18 guano samples were collected and seven of these samples included immature specimens. A total of 507 immature specimens were captured; 495 of these specimens were larvae and 12 were pupae. The presence of paca (Agouti paca) footprints near Gruta dos Animais and Gruta dos Lages suggests the association of Pi. pacae with this rodent. This finding may explain the abundance of Pi. pacae in these locations, while the species is relatively rare in the forest. Deanemyia maruaga is a cave species that uses guano to breed during its immature stages. Adult specimens of this species are apparently parthenogenetic and autogenous and represent the second record of parthenogenesis for the subfamily Phlebotominae.

  13. Aerosol and precipitation chemistry measurements in a remote site in Central Amazonia: the role of biogenic contribution

    NASA Astrophysics Data System (ADS)

    Pauliquevis, T.; Lara, L. L.; Antunes, M. L.; Artaxo, P.

    2012-06-01

    In this analysis a 3.5 years data set of aerosol and precipitation chemistry, obtained in a remote site in Central Amazonia (Balbina, (1°55' S, 59°29' W, 174 m a.s.l.), about 200 km north of Manaus) is discussed. Aerosols were sampled using stacked filter units (SFU), which separate fine (d < 2.5 μm) and coarse mode (2.5 μm < d < 10.0 μm) aerosol particles. Filters were analyzed for particulate mass (PM), Equivalent Black Carbon (BCE) and elemental composition by Particle Induced X-Ray Emission (PIXE). Rainwater samples were collected using a wet-only sampler and samples were analyzed for pH and ionic composition, which was determined using ionic chromatography (IC). Natural sources dominated the aerosol mass during the wet season, when it was predominantly of natural biogenic origin mostly in the coarse mode, which comprised up to 81% of PM10. Biogenic aerosol from both primary emissions and secondary organic aerosol dominates the fine mode in the wet season, with very low concentrations (average 2.2 μg m-3). Soil dust was responsible for a minor fraction of the aerosol mass (less than 17%). Sudden increases in the concentration of elements as Al, Ti and Fe were also observed, both in fine and coarse mode (mostly during the April-may months), which we attribute to episodes of Saharan dust transport. During the dry periods, a significant contribution to the fine aerosols loading was observed, due to the large-scale transport of smoke from biomass burning in other portions of the Amazon basin. This contribution is associated with the enhancement of the concentration of S, K, Zn and BCE. Chlorine, which is commonly associated to sea salt and also to biomass burning emissions, presented higher concentration not only during the dry season but also for the April-June months, due to the establishment of more favorable meteorological conditions to the transport of Atlantic air masses to Central Amazonia. The chemical composition of rainwater was similar to those

  14. Cloud characteristics over central Amazonia during GTE/ABLE 2B derived from multispectral visible and infrared spin scan radiometer atmospheric sounder observations

    SciTech Connect

    Menzel, W.P. ); Schmit, T.J.; Wylie, D.P. )

    1990-09-20

    Multispectral GOES/Visible and Infrared Spin Scan Radiometer Atmospheric Sounder (VAS) observations in the carbon dioxide absorption band at 15 {mu}m have been used to calculate diurnal cloud statistics over central Amazonia region for 4 days during the Global Tropospheric Experiment/Amazon Boundary Layer Experiment (GTE/ABLE IIB). The CO{sub 2} technique calculates both cloud top pressure and effective emissivity from radiative transfer principles. Transmissive clouds that are partially transparent to terrestrial radiation have been reliably separated from opaque clouds in the statistics of cloud cover. A high incidence of transmissive clouds (about 47%) was found on the average. Diurnal characteristics of cloud cover over Amazonia have been linked to convective activity over this region. On days with afternoon convection, an increase in low-altitude opaque clouds was followed by a subsequent increase in high-altitude transmissive clouds.

  15. The effect of seasonality on the structure of rotifers in a black-water shallow lake in Central Amazonia.

    PubMed

    Nova, Clarice C; Lopes, Vanessa G; Souza, Leonardo Coimbra E; Kozlowsky-Suzuki, Betina; Pereira, Talita A A; Branco, Christina W C

    2014-09-01

    Rotifers have often been used as indicators of sudden changes in physical and chemical features of the aquatic environment. Such features vary greatly during flood pulse events in small lakes connected to major floodplains. However, few are the studies that investigate the consequences of the flood pulse in rotifer species composition, abundance, richness and diversity, especially in Amazonian lakes. We analyzed samples from a small blackwater lake of an "igarapé" connected permanently to the Negro river, in Central Amazonia. Samples were taken twice a year for two years, comprising flooding and receding periods of the flood pulse. Rotifer abundance increased significantly after draught events, and electrical conductivity and turbidity were intrinsically related to such variation. Species composition also changed from flooding to receding periods. Some taxa, such as Brachionus zahniseri reductus and Lecane remanei were restricted to receding periods, while Brachionus zahniseri, Brachionus gillardi and Lecane proiecta were only present during flooding. A shift in the composition of rotifer families was observed from one period to another, showing the effect of renewing waters of the flood pulse. These results suggest that the flood pulse acts as a driving force and stressing condition, considerably altering rotifer community dynamics, either changing species composition or decreasing abundance.

  16. Prehistorically modified soils of central Amazonia: a model for sustainable agriculture in the twenty-first century.

    PubMed

    Glaser, Bruno

    2007-02-28

    Terra Preta soils of central Amazonia exhibit approximately three times more soil organic matter, nitrogen and phosphorus and 70 times more charcoal compared to adjacent infertile soils. The Terra Preta soils were generated by pre-Columbian native populations by chance or intentionally adding large amounts of charred residues (charcoal), organic wastes, excrements and bones. In this paper, it is argued that generating new Terra Preta sites ('Terra Preta nova') could be the basis for sustainable agriculture in the twenty-first century to produce food for billions of people, and could lead to attaining three Millennium Development Goals: (i) to combat desertification, (ii) to sequester atmospheric CO2 in the long term, and (iii) to maintain biodiversity hotspots such as tropical rainforests. Therefore, large-scale generation and utilization of Terra Preta soils would decrease the pressure on primary forests that are being extensively cleared for agricultural use with only limited fertility and sustainability and, hence, only providing a limited time for cropping. This would maintain biodiversity while mitigating both land degradation and climate change. However, it should not be overlooked that the infertility of most tropical soils (and associated low population density) is what could have prevented tropical forests undergoing large-scale clearance for agriculture. Increased fertility may increase the populations supported by shifting cultivation, thereby maintaining and increasing pressure on forests.

  17. Epidemiology of cutaneous leishmaniasis in central Amazonia: a comparison of sex-biased incidence among rural settlers and field biologists.

    PubMed

    Soares, Letícia; Abad-Franch, Fernando; Ferraz, Gonçalo

    2014-08-01

    Cutaneous leishmaniasis (CL) is more frequently reported in men than in women; this may be due to male-biased exposure to CL vectors, female-biased resistance against the disease or both. We sought to determine whether gender-specific exposure to vector habitats explains male-biased CL incidence in two human populations of central Amazonia. We compared the CL incidence in one population of field researchers (N = 166), with similar exposure for males and females, and one population of rural settlers (N = 646), where exposure is overall male-biased. We used a combination of questionnaires and clinical data to quantify CL cases, and modelled disease incidence in a Bayesian framework. There was a moderately higher incidence of CL among men than among women in both populations, but male bias decreased as exposure time increased. Disease incidence was overall higher among field researchers, suggesting that they are an important but understudied CL risk group. Our comparison of two contrasting populations provided epidemiological evidence that CL incidence can be male-biased even when exposure is comparable in both sexes. © 2014 John Wiley & Sons Ltd.

  18. The metabolic cost of nesting: body condition and blood parameters of Caiman crocodilus and Melanosuchus niger in Central Amazonia.

    PubMed

    Barão-Nóbrega, José António Lemos; Marioni, Boris; Botero-Arias, Robinson; Nogueira, António José Arsénia; Lima, Emerson Silva; Magnusson, William Ernest; Da Silveira, Ronis; Marcon, Jaydione Luiz

    2017-06-19

    Although nesting ecology is well studied in several crocodilian species, it is not known how nest attendance influences physiology and body condition of nesting females. In this study, we describe body condition and serum biochemical values of nesting female, non-nesting female and male spectacled caiman (Caiman crocodilus) and black caiman (Melanosuchus niger) in two areas of Central Amazonia. We also evaluated the effect of nest age and nest distance to water on body condition and blood parameters of nesting females. Body condition and plasmatic concentrations of glucose, triglycerides, lactate and uric acid of nesting females were significantly different from those of non-nesting females and males in C. crocodilus, but not in M. niger. Our study also demonstrated that nest age and distance to water had a negative effect on female body condition in C. crocodilus, but not in M. niger. Female C. crocodilus attending older nests or nests built further away from permanent water bodies tended to have lower body condition. Our results demonstrate that the nesting strategy of C. crocodilus has a metabolic cost associated with nest attendance for nesting females, which appear to depend on accumulated energetic reserves during nest attendance. In contrast, nest attendance had little effect on the physiology of female M. niger.

  19. Primate abundance and habitat preferences on the lower Urubamba and Tambo rivers, central-eastern Peruvian Amazonia.

    PubMed

    Aquino, Rolando; Cornejo, Fanny M; Heymann, Eckhard W

    2013-10-01

    We report information on population density, group size, and habitat preferences of primates along the lower Río Urubamba and in the Río Urubamba-Río Tambo interfluvium, in central-eastern Peruvian Amazonia, an area that has been little explored with regard to its primate fauna. During 425 km of transect walks in October-November 2008 and April-May 2009 totally 174 groups of nine primate species were encountered, the most common being Callicebus brunneus (45 groups), Saguinus imperator (41 groups), and Aotus nigriceps (26 groups). Group sizes were smallest for A. nigriceps and C. brunneus (mean of 2.8 and 2.9, respectively) and largest for Saimiri boliviensis (mean 15.6). Population densities were lowest for Lagothrix cana (3.3 individuals/km(2)) and highest for A. nigriceps (31.1 individuals/km(2)). Groups of C. brunneus, S. imperator, S. boliviensis, Cebus albifrons, and Cebus apella were most frequently (83 % of sightings) encountered in semi-dense or in open primary forest that included stands of bamboo (Guadua sarcocarpa) or where bamboo was a very common species.

  20. CO2 flux spatial variability in a tropical reservoir in the Central Amazonia

    NASA Astrophysics Data System (ADS)

    Santana, R. A. S. D.; do Vale, R. S.; Tota, J.; Miller, S. D.; Ferreira, R. B., Jr.; Alves, E. G.; Batalha, S. S. A.; Souza, R. A. F. D.

    2014-12-01

    The carbon budget over water surfaces in the Amazon has an important role in the total budget of this greenhouse gas a regional and global scale. However, more accurate estimates of the spatial and temporal distribution of the CO2 flux over those water surfaces are still required. In this context, this study aims to understand the spatial distribution of CO2 flux in the Balbina hydroelectric reservoir, located at Presidente Figueiredo city, Amazonas, Brazil. The floating chamber method was used to measure and calculate the CO2 flux. This method coup a chamber of known volume with an infrared gas analyzer (LiCor, LI-840A). Measurements were performed at 1 Hz during 20-30 minutes at 5 different points of the reservoir, four upstream (two near the edge and two in the middle) and one downstream of the dam. At all locations the surface water was supersaturated in pCO2 and fluxes were from the water to the atmosphere. The maximum CO2 flux observed was 1.2 μmol m-2 s-1 at the center point of the reservoir upstream the dam. The minimum CO2 flux was 0.05 μmol m-2 s-1, observed near the edge on the upstream side of the dam. On average, CO2 fluxes were larger downstream of the dam, 0.7 μmol m-2 s-1, compared to upstream, 0.45 μmol m-2 s-1. This pattern is consistent with that found in previous studies at this site using other flux estimation methods, and is consistent with turbulent mixing promoted by the water turbine. However, the mean CO2 flux for all measured points using the chambers, 0.47 μmol m-2 s-1, was much lower than those previously found using other methods. The reason for the difference between methods is unclear. In situ deployment of multiple flux estimation methods would be valuable, as would longer periods of measurements.

  1. Nitrous oxide fluxes and nitrogen cycling along a pasturechronosequence in Central Amazonia, Brazil

    Treesearch

    B. Wick; E. Veldkamp; W. Z. de Mello; M. Keller; P. Crill

    2005-01-01

    We studied nitrous oxide (N2O) fluxes and soil nitrogen (N) cycling following forest conversion to pasture in the central Amazon near Santarém, Pará, Brazil. Two undisturbed forest sites and 27 pasture sites of 0.5 to 60 years were sampled once each during wet and dry seasons. In addition to soil-atmosphere fluxes of N...

  2. Occurrence of filamentous fungi in Simulium goeldii Cerqueira & Nunes de Mello (diptera: simuliidae) larvae in central Amazonia, Brazil

    PubMed Central

    Fonseca, Quézia Ribeiro; de Moura Sarquis, Maria Inez; Hamada, Neusa; Alencar, Yamile Benaion

    2008-01-01

    The family Simuliidae is the host of simbiontes fungi that inhabit the digestive tracts of arthropods. This paper reports the presence of fungi in Simulium goeldii Cerqueira & Nunes de Mello larvae in Amazonia. We observed that the larvae are a good component of aquatic systems to isolate filamentous fungi. PMID:24031217

  3. The movement of pre-adapted cool taxa in north-central Amazonia during the last glacial

    NASA Astrophysics Data System (ADS)

    D'Apolito, Carlos; Absy, Maria Lúcia; Latrubesse, Edgardo M.

    2017-08-01

    The effects of climate change on the lowland vegetation of Amazonia during the last glacial cycle are partially known for the middle and late Pleniglacial intervals (late MIS 3, 59-24 ka and MIS 2, 24-11 ka), but are still unclear for older stages of the last glacial and during the last interglacial. It is known that a more seasonal dry-wet climate caused marginal forest retraction and together with cooling rearranged forest composition to some extent. This is observed in pollen records across Amazonia depicting presence of taxa at glacial times in localities where they do not live presently. The understanding of taxa migration is hindered by the lack of continuous interglacial-glacial lowland records. We present new data from a known locality in NW Amazonia (Six Lakes Hill), showing a vegetation record that probably started during MIS 5 (130-71 ka) and lasted until the onset of the Holocene. The vegetation record unravels a novel pattern in tree taxa migration: (1) from the beginning of this cycle Podocarpus and Myrsine are recorded and (2) only later do Hedyosmum and Alnus appear. The latter group is largely restricted to montane biomes or more distant locations outside Amazonia, whereas the first is found in lowlands close to the study site on sandy soils. These findings imply that Podocarpus and Myrsine responded to environmental changes equally and this reflects their concomitant niche use in NW Amazonia. Temperature drop is not discarded as a trigger of internal forest composition change, but its effects are clearer later in the Pleniglacial rather than the Early Glacial. Therefore early climatic/environmental changes had a first order effect on vegetation that invoke alternative explanations. We claim last glacial climate-induced modifications on forest composition favoured the expansion of geomorphologic-soil related processes that initiated forest rearrangement.

  4. Sources and sinks of formic, acetic, and pyruvic acids over central Amazonia. II - Wet season

    NASA Technical Reports Server (NTRS)

    Talbot, R. W.; Andreae, M. O.; Berresheim, H.; Jacob, D. J.; Beecher, K. M.

    1990-01-01

    Potential sources and sinks of formic, acetic, and pyruvic acids over the Amazon forest were investigated using a photochemical model and data collected on gas phase concentrations of these acids in the forest canopy, boundary layer, and free troposphere over the central Amazon Basin during the 1987 wet season. It was found that the atmospheric reactions previously suggested in the literature as sources of carboxylic acids (i.e., the gas phase decomposition of isoprene, the reaction between CH3CO3 and a peroxide, and aqueous phase oxidation of CH2O) appear to be too slow to explain the observed concentrations, suggesting that other atmospheric reactions, so far unidentified, could make a major contribution to the carboxylic acid budgets.

  5. Influence of urban pollution on the production of organic particulate matter from isoprene epoxydiols in central Amazonia

    SciTech Connect

    de Sa, Suzane S.; Palm, Brett B.; Campuzano-Jost, Pedro; Day, Douglas A.; Newburn, Matthew K.; Hu, Weiwei; Isaacman-VanWertz, Gabriel; Yee, Lindsay D.; Thalman, Ryan; Brito, Joel; Carbone, Samara; Artaxo, Paulo; Goldstein, Allen H.; Manzi, Antonio O.; Souza, Rodrigo A. F.; Mei, Fan; Shilling, John E.; Springston, Stephen R.; Wang, Jian; Surratt, Jason D.; Alexander, M. Lizabeth; Jimenez, Jose L.; Martin, Scot T.

    2016-12-13

    The atmospheric chemistry of isoprene contributes to the production of a substantial mass fraction of the particulate matter (PM) over tropical forests. Isoprene epoxydiols (IEPOX) produced in the gas phase by the oxidation of isoprene under HO2-dominant conditions are subsequently taken up by particles, thereby leading to production of secondary organic PM. The present study investigates possible perturbations to this pathway by urban pollution. The measurement site in central Amazonia was located 4 to 6 hours downwind of Manaus, Brazil. Measurements took place from February through March 2014 of the wet season, as part of the GoAmazon2014/5 experiment. Mass spectra of organic PM collected with an Aerodyne Aerosol Mass Spectrometer were analyzed by positive-matrix factorization. One resolved statistical factor (“IEPOX-SOA factor”) was associated with PM production by the IEPOX pathway. Loadings of this factor correlated with independently measured mass concentrations of tracers of IEPOX-derived PM, namely C5-alkene triols and 2-methyltetrols (R = 0.96 and 0.78, respectively). Factor loading, as well as the ratio of the factor loading to organic PM mass concentration, decreased under polluted compared to background conditions. For the study period, sulfate concentration explained 37 % of the variability in the factor loading. After segregation of the data set by NOy concentration, the sulfate concentration explained up to 75 % of the variability in factor loading within the NOy subsets. The sulfate-detrended IEPOX-SOA factor loading decreased by two- to three-fold for an increase in NOy concentration from 0.5 to 2 ppb. Here, the suppressing effects of elevated NO dominated over the enhancing effects of higher sulfate with respect to the production of IEPOX-derived PM. Relative to background conditions, the Manaus pollution contributed more significantly to NOy than to sulfate. In this light

  6. Distribution of throughfall and stemflow in multi-strata agroforestry, perennial monoculture, fallow and primary forest in central Amazonia, Brazil

    NASA Astrophysics Data System (ADS)

    Schroth, Götz; Ferreira da Silva, Luciana; Wolf, Marc-Andree; Geraldes Teixeira, Wenceslau; Zech, Wolfgang

    1999-07-01

    The partitioning of rain water into throughfall, stemflow and interception loss when passing through plant canopies depends on properties of the respective plant species, such as leaf area and branch angles. In heterogeneous vegetation, such as tropical forest or polycultural systems, the presence of different plant species may consequently result in a mosaic of situations with respect to quantity and quality of water inputs into the soil. As these processes influence not only the water availability for the plants, but also water infiltration and nutrient leaching, the understanding of plant effects on the repartitioning of rain water may help in the optimization of land use systems and management practices. We measured throughfall and stemflow in a perennial polyculture (multi-strata agroforestry), monocultures of peach palm (Bactris gasipaes) for fruit and for palmito, a monoculture of cupuaçu (Theobroma grandiflorum), spontaneous fallow and primary forest during one year in central Amazonia, Brazil. The effect on rain water partitioning was measured separately for four useful tree species in the polyculture and for two tree species in the primary forest. Throughfall at two stem distances, and stemflow, differed significantly between tree species, resulting in pronounced spatial patterns of water input into the soil in the polyculture system. For two tree species, peach palm for fruit (Bactris gasipaes) and Brazil nut trees (Bertholletia excelsa), the water input into the soil near the stem was significantly higher than the open-area rainfall. This could lead to increased nutrient leaching when fertilizer is applied close to the stem of these trees. In the primary forest, such spatial patterns could also be detected, with significantly higher water input near a palm (Oenocarpus bacaba) than near a dicotyledonous tree species (Eschweilera sp.). Interception losses were 6·4% in the polyculture, 13·9 and 12·3% in the peach palm monocultures for fruit and for

  7. Influence of urban pollution on the production of organic particulate matter from isoprene epoxydiols in central Amazonia

    NASA Astrophysics Data System (ADS)

    de Sá, Suzane S.; Palm, Brett B.; Campuzano-Jost, Pedro; Day, Douglas A.; Newburn, Matthew K.; Hu, Weiwei; Isaacman-VanWertz, Gabriel; Yee, Lindsay D.; Thalman, Ryan; Brito, Joel; Carbone, Samara; Artaxo, Paulo; Goldstein, Allen H.; Manzi, Antonio O.; Souza, Rodrigo A. F.; Mei, Fan; Shilling, John E.; Springston, Stephen R.; Wang, Jian; Surratt, Jason D.; Lizabeth Alexander, M.; Jimenez, Jose L.; Martin, Scot T.

    2017-06-01

    The atmospheric chemistry of isoprene contributes to the production of a substantial mass fraction of the particulate matter (PM) over tropical forests. Isoprene epoxydiols (IEPOX) produced in the gas phase by the oxidation of isoprene under HO2-dominant conditions are subsequently taken up by particles, thereby leading to production of secondary organic PM. The present study investigates possible perturbations to this pathway by urban pollution. The measurement site in central Amazonia was located 4 to 6 h downwind of Manaus, Brazil. Measurements took place from February through March 2014 of the wet season, as part of the GoAmazon2014/5 experiment. Mass spectra of organic PM collected with an Aerodyne Aerosol Mass Spectrometer were analyzed by positive-matrix factorization. One resolved statistical factor (IEPOX-SOA factor) was associated with PM production by the IEPOX pathway. The IEPOX-SOA factor loadings correlated with independently measured mass concentrations of tracers of IEPOX-derived PM, namely C5-alkene triols and 2-methyltetrols (R = 0. 96 and 0.78, respectively). The factor loading, as well as the ratio f of the loading to organic PM mass concentration, decreased under polluted compared to background conditions. For an increase in NOy concentration from 0.5 to 2 ppb, the factor loading and f decreased by two to three fold. Overall, sulfate concentration explained 37 % of the variability in the factor loading. After segregation of factor loading into subsets based on NOy concentration, the sulfate concentration explained up to 75 % of the variability. Considering both factors, the data sets show that the suppressing effects of increased NO concentrations dominated over the enhancing effects of higher sulfate concentrations. The pollution from Manaus elevated NOy concentrations more significantly than sulfate concentrations relative to background conditions. In this light, increased emissions of nitrogen oxides, as anticipated for some scenarios

  8. Leaf gas exchange and carbohydrates in tropical trees differing in successional status in two light environments in central Amazonia.

    PubMed

    Marenco, R A; de C Gonçalves, J F; Vieira, G

    2001-12-01

    Monoculture and mixed stands of mahogany (Swietenia macrophylla King) and tonka bean (Dipteryx odorata Willd.) trees were established on degraded land in central Amazonia to compare leaf gas exchange parameters between plants grown in sunlight in an open field and in shade beneath a balsa wood (Ochroma pyramidale Cav.) canopy. Shading increased specific leaf area by about 50% in both species. Shading reduced height and diameter growth of S. macrophylla, whereas it increased these parameters for D. odorata. Light-saturated photosynthesis (Amax), stomatal conductance (gs) and transpiration (E) were higher in S. macrophylla than in D. odorata. In S. macrophylla, Amax was higher in sun leaves (12.9 +/- 0.9 micromol m-2 s-1) than in shade leaves (10.2 +/- 1.0 micromol m-2 s-1), whereas light environment had no significant effect on Amax of D. odorata. In both species, CO2-saturated photosynthesis (Apot) was higher in sun leaves (22 +/- 1.4 micromol m-2 s-1) than in shade leaves (17-20 +/- 0.8 micromol m-2 s-1). Stomatal conductance and E increased in sun leaves of S. macrophylla by 45 and 38%, respectively, whereas light environment did not affect gs and E of D. odorata. Photorespiration rates (Pr) varied from 28 to 36% of net photosynthesis (A) at ambient atmospheric CO2 concentration (Ca) but declined to around 7% of A at higher Ca. Leaf dark respiration (Rd) and the CO2 compensation point (Gamma) were lower in shade-grown plants than in open-grown plants. Compared with shade-grown plants, total nonstructural carbohydrate (TNC) concentrations increased by 56% in S. macrophylla and by 30% in D. odorata in the open field. Leaf nitrogen (NL) concentrations were higher in open-grown plants than in shade-grown plants of both species, and TNC and NL concentrations were negatively correlated (r = -0.77). High TNC accumulation in S. macrophylla in the open field suggests that photosynthesis is unlikely to be growth-limiting at this site. We conclude that photosynthetic

  9. Influence of urban pollution on the production of organic particulate matter from isoprene epoxydiols in central Amazonia

    DOE PAGES

    de Sa, Suzane S.; Palm, Brett B.; Campuzano-Jost, Pedro; ...

    2017-06-06

    The atmospheric chemistry of isoprene contributes to the production of a substantial mass fraction of the particulate matter (PM) over tropical forests. Isoprene epoxydiols (IEPOX) produced in the gas phase by the oxidation of isoprene under HO2-dominant conditions are subsequently taken up by particles, thereby leading to production of secondary organic PM. The present study investigates possible perturbations to this pathway by urban pollution. The measurement site in central Amazonia was located 4 to 6 h downwind of Manaus, Brazil. Measurements took place from February through March 2014 of the wet season, as part of the GoAmazon2014/5 experiment. Mass spectramore » of organic PM collected with an Aerodyne Aerosol Mass Spectrometer were analyzed by positive-matrix factorization. One resolved statistical factor ("IEPOX-SOA factor") was associated with PM production by the IEPOX pathway. The IEPOX-SOA factor loadings correlated with independently measured mass concentrations of tracers of IEPOX-derived PM, namely C5-alkene triols and 2-methyltetrols (R = 0.96 and 0.78, respectively). The factor loading, as well as the ratio f of the loading to organic PM mass concentration, decreased under polluted compared to background conditions. For an increase in NOy concentration from 0.5 to 2 ppb, the factor loading and f decreased by two to three fold. Overall, sulfate concentration explained 37 % of the variability in the factor loading. After segregation of factor loading into subsets based on NOy concentration, the sulfate concentration explained up to 75 % of the variability. Considering both factors, the data sets show that the suppressing effects of increased NO concentrations dominated over the enhancing effects of higher sulfate concentrations. Furthermore, the pollution from Manaus elevated NOy concentrations more significantly than sulfate concentrations relative to background conditions. In this light, increased emissions of nitrogen oxides, as anticipated for

  10. Influence of urban pollution on the production of organic particulate matter from isoprene epoxydiols in central Amazonia

    DOE PAGES

    de Sa, Suzane S.; Palm, Brett B.; Campuzano-Jost, Pedro; ...

    2017-06-06

    The atmospheric chemistry of isoprene contributes to the production of a substantial mass fraction of the particulate matter (PM) over tropical forests. Isoprene epoxydiols (IEPOX) produced in the gas phase by the oxidation of isoprene under HO2-dominant conditions are subsequently taken up by particles, thereby leading to production of secondary organic PM. The present study investigates possible perturbations to this pathway by urban pollution. The measurement site in central Amazonia was located 4 to 6 hours downwind of Manaus, Brazil. Measurements took place from February through March 2014 of the wet season, as part of the GoAmazon2014/5 experiment. Mass spectramore » of organic PM collected with an Aerodyne Aerosol Mass Spectrometer were analyzed by positive-matrix factorization. One resolved statistical factor (“IEPOX-SOA factor”) was associated with PM production by the IEPOX pathway. Loadings of this factor correlated with independently measured mass concentrations of tracers of IEPOX-derived PM, namely C5-alkene triols and 2-methyltetrols (R = 0.96 and 0.78, respectively). Factor loading, as well as the ratio of the factor loading to organic PM mass concentration, decreased under polluted compared to background conditions. For the study period, sulfate concentration explained 37 % of the variability in the factor loading. After segregation of the data set by NOy concentration, the sulfate concentration explained up to 75 % of the variability in factor loading within the NOy subsets. The sulfate-detrended IEPOX-SOA factor loading decreased by two- to three-fold for an increase in NOy concentration from 0.5 to 2 ppb. Here, the suppressing effects of elevated NO dominated over the enhancing effects of higher sulfate with respect to the production of IEPOX-derived PM. Relative to background conditions, the Manaus pollution contributed more significantly to NOy than to sulfate. In this light, increased emissions of nitrogen oxides, as anticipated for

  11. Litter manipulation and associated invertebrate fauna in secondary forest, central Amazonia, Brazil

    NASA Astrophysics Data System (ADS)

    Santos, Evanira M. R.; Franklin, Elizabeth; Luizão, Flávio J.

    2008-11-01

    Plant litter from selected tree species has been used for improving soil productivity in low-input systems of secondary vegetation in Central Amazon, leading to different conditions for invertebrates. Soil invertebrate assemblages were monitored to test the effects of adding litter types of contrasting nutritional quality and periods of exposure on the development of the community. We established four second growth plots with 80 subplots of 3 m 2 from which the original litter was removed and replaced in 60 subplots. Twenty subplots received Hevea brasiliensis leaves, 20 others Carapa guianensis leaves, and another 20 an equal mixture of H. brasiliensis, C. guianensis and Vismia guianensis. Twenty subplots were left with the original litter. Litter and mineral soil (5 cm deep) sub-horizons were collected after 45, 100, 160, 240 and 300 days of exposure. The invertebrates were extracted using Kempson apparatus. At the day 210, the litter was replenished to match the surrounding litter. Regression analyses showed no significant effect of litter type, but the period of exposure did affect the community in both sub-horizons. Only after the litter replenishment, the type of litter and periods of exposure affected the community in the litter sub-horizon. Because we tried to isolate the effects of litter composition from other large-scale phenomena, several factors interfered in the experiment and potential problems were identified to optimize the investigation. The sampling design must be improved by using a larger number of subsamples for each kind of litter within each plot. Coarse parameters of Order and Family were suited to detect major environmental patterns on soil invertebrates, but taxonomic resolution to species and/or morphospecies is required to detect more subtle effects. Future manipulations should also be done on a longer time scale, and the replicates need to be spread over larger areas to capture the natural variations within the ecosystems.

  12. Spectral Light Absorption and Scattering by Aerosol Particles in Central Amazonia

    NASA Astrophysics Data System (ADS)

    Artaxo, P.; Holanda, B. A.; Ferreira De Brito, J.; Carbone, S.; Barbosa, H. M.; Rizzo, L. V.; Cirino, G. G.; Andreae, M. O.; Saturno, J.; Pöhlker, C.; Martin, S. T.; Holben, B. N.; Schafer, J.

    2015-12-01

    As part of the GoAmazon2014/5, a detailed characterization of spectral light absorption and light scattering was performed at four research sites located in the central Amazon forest at different distances upwind and downwind of Manaus. The sites ATTO (T0a) and Embrapa (T0e) are located upwind of Manaus where it is possible to observe very pristine atmospheric conditions in wet season. The site Tiwa (T2) is being operated under the direct influence of the Manaus plume at 5 km downwind of Manaus and, finally, the Manacapuru (T3) site is located at about 60 km downwind of Manaus. The spectral dependence of light absorption and light scattering were measured using Aethalometers (7-wavelengths) and Nephelometers (3-wavelengths), respectively. By calculating the Absorption Angstrom Exponent (AAE), it was possible to get information about the source of the aerosol whereas the Scattering Angstrom Exponent (SAE) gives information about its size distribution. Sunphotometers from the AERONET network were set up at T3 and T0e sites to measure column Aerosol Optical Depth (AOD). For all the stations, much higher absorption and scattering coefficients were observed during the dry season in comparison to the wet season, as a result of the larger concentration of BC and OC present in the biomass burning events. Additionally, we also observed Manaus plume pollution that alters the BC signal. There is also an increase of the AAE during the dry season due to the larger amount of aerosols from biomass burning compared with urban pollution. High values of AAE are also observed during the wet season, attributed to the presence of long-range transport of aerosols from Africa. The SAE for all the sites are lower during the wet season, with the dominance of large biological particles, and increases during the dry season as a consequence of fine particles emitted from both biomass and fossil fuel burning. The AOD at T0e and T3 (Jan-Jun/2014) showed very similar values ranging from 0.05 to

  13. Nitrous oxide fluxes and nitrogen cycling along a pasture chronosequence in Central Amazonia, Brazil

    NASA Astrophysics Data System (ADS)

    Wick, B.; Veldkamp, E.; de Mello, W. Z.; Keller, M.; Crill, P.

    2005-05-01

    We studied nitrous oxide (N2O) fluxes and soil nitrogen (N) cycling following forest conversion to pasture in the central Amazon near Santarém, Pará, Brazil. Two undisturbed forest sites and 27 pasture sites of 0.5 to 60 years were sampled once each during wet and dry seasons. In addition to soil-atmosphere fluxes of N2O we measured 27 soil chemical, soil microbiological and soil physical variables.

    Soil N2O fluxes were higher in the wet season than in the dry season. Fluxes of N2O from forest soils always exceeded fluxes from pasture soils and showed no consistent trend with pasture age. At our forest sites, nitrate was the dominant form of inorganic N both during wet and dry season. At our pasture sites nitrate generally dominated the inorganic N pools during the wet season and ammonium dominated during the dry season. Net mineralization and nitrification rates displayed large variations. During the dry season net immobilization of N was observed in some pastures. Compared to forest sites, young pasture sites (≤2 years) had low microbial biomass N and protease activities. Protease activity and microbial biomass N peaked in pastures of intermediate age (4 to 8 years) followed by consistently lower values in older pasture (10 to 60 years). The C/N ratio of litter was low at the forest sites (~25) and rapidly increased with pasture age reaching values of 60-70 at pastures of 15 years and older.

    Nitrous oxide emissions at our sites were controlled by C and N availability and soil aeration. Fluxes of N2O were negatively correlated to leaf litter C/N ratio, NH4+-N and the ratio of NO3--N to the sum of NO3--N + NH4+-N (indicators of N availability), and methane fluxes and bulk density (indicators of soil aeration status) during the wet season. During the dry season fluxes of N2O were positively correlated to microbial biomass N, β-glucosidase activity, total inorganic N stocks and NH4+-N. In our study

  14. Nitrous oxide fluxes and nitrogen cycling along a pasture chronosequence in Central Amazonia, Brazil

    NASA Astrophysics Data System (ADS)

    Wick, B.; Veldkamp, E.; de Mello, W. Z.; Keller, M.; Crill, P.

    2005-08-01

    We studied nitrous oxide (N2O) fluxes and soil nitrogen (N) cycling following forest conversion to pasture in the central Amazon near Santarém, Pará, Brazil. Two undisturbed forest sites and 27 pasture sites of 0.5 to 60 years were sampled once each during wet and dry seasons. In addition to soil-atmosphere fluxes of N2O we measured 27 soil chemical, soil microbiological and soil physical variables.

    Soil N2O fluxes were higher in the wet season than in the dry season. Fluxes of N2O from forest soils always exceeded fluxes from pasture soils and showed no consistent trend with pasture age. At our forest sites, nitrate was the dominant form of inorganic N both during wet and dry season. At our pasture sites nitrate generally dominated the inorganic N pools during the wet season and ammonium dominated during the dry season. Net mineralization and nitrification rates displayed large variations. During the dry season net immobilization of N was observed in some pastures. Compared to forest sites, young pasture sites (≤2 years) had low microbial biomass N and protease activities. Protease activity and microbial biomass N peaked in pastures of intermediate age (4 to 8 years) followed by consistently lower values in older pasture (10 to 60 years). The C/N ratio of litter was low at the forest sites (~25) and rapidly increased with pasture age reaching values of 60-70 at pastures of 15 years and older.

    Nitrous oxide emissions at our sites were controlled by C and N availability and soil aeration. Fluxes of N2O were negatively correlated to leaf litter C/N ratio, NH4+-N and the ratio of NO3--N to the sum of NO3--N + NH4+-N (indicators of N availability), and methane fluxes and bulk density (indicators of soil aeration status) during the wet season. During the dry season fluxes of N2O were positively correlated to microbial biomass N, β-glucosidase activity, total inorganic N stocks and NH4+-N. In our study region, pastures of all age emitted

  15. Miocene flooding events of western Amazonia.

    PubMed

    Jaramillo, Carlos; Romero, Ingrid; D'Apolito, Carlos; Bayona, German; Duarte, Edward; Louwye, Stephen; Escobar, Jaime; Luque, Javier; Carrillo-Briceño, Jorge D; Zapata, Vladimir; Mora, Alejandro; Schouten, Stefan; Zavada, Michael; Harrington, Guy; Ortiz, John; Wesselingh, Frank P

    2017-05-01

    There is a considerable controversy about whether western Amazonia was ever covered by marine waters during the Miocene [23 to 5 Ma (million years ago)]. We investigated the possible occurrence of Miocene marine incursions in the Llanos and Amazonas/Solimões basins, using sedimentological and palynological data from two sediment cores taken in eastern Colombia and northwestern Brazil together with seismic information. We observed two distinct marine intervals in the Llanos Basin, an early Miocene that lasted ~0.9 My (million years) (18.1 to 17.2 Ma) and a middle Miocene that lasted ~3.7 My (16.1 to 12.4 Ma). These two marine intervals are also seen in Amazonas/Solimões Basin (northwestern Amazonia) but were much shorter in duration, ~0.2 My (18.0 to 17.8 Ma) and ~0.4 My (14.1 to 13.7 Ma), respectively. Our results indicate that shallow marine waters covered the region at least twice during the Miocene, but the events were short-lived, rather than a continuous full-marine occupancy of Amazonian landscape over millions of years.

  16. Miocene flooding events of western Amazonia

    PubMed Central

    Jaramillo, Carlos; Romero, Ingrid; D’Apolito, Carlos; Bayona, German; Duarte, Edward; Louwye, Stephen; Escobar, Jaime; Luque, Javier; Carrillo-Briceño, Jorge D.; Zapata, Vladimir; Mora, Alejandro; Schouten, Stefan; Zavada, Michael; Harrington, Guy; Ortiz, John; Wesselingh, Frank P.

    2017-01-01

    There is a considerable controversy about whether western Amazonia was ever covered by marine waters during the Miocene [23 to 5 Ma (million years ago)]. We investigated the possible occurrence of Miocene marine incursions in the Llanos and Amazonas/Solimões basins, using sedimentological and palynological data from two sediment cores taken in eastern Colombia and northwestern Brazil together with seismic information. We observed two distinct marine intervals in the Llanos Basin, an early Miocene that lasted ~0.9 My (million years) (18.1 to 17.2 Ma) and a middle Miocene that lasted ~3.7 My (16.1 to 12.4 Ma). These two marine intervals are also seen in Amazonas/Solimões Basin (northwestern Amazonia) but were much shorter in duration, ~0.2 My (18.0 to 17.8 Ma) and ~0.4 My (14.1 to 13.7 Ma), respectively. Our results indicate that shallow marine waters covered the region at least twice during the Miocene, but the events were short-lived, rather than a continuous full-marine occupancy of Amazonian landscape over millions of years. PMID:28508052

  17. Determinants of Plant Community Assembly in a Mosaic of Landscape Units in Central Amazonia: Ecological and Phylogenetic Perspectives

    PubMed Central

    Umaña, María Natalia; Norden, Natalia; Cano, Ángela; Stevenson, Pablo R.

    2012-01-01

    The Amazon harbours one of the richest ecosystems on Earth. Such diversity is likely to be promoted by plant specialization, associated with the occurrence of a mosaic of landscape units. Here, we integrate ecological and phylogenetic data at different spatial scales to assess the importance of habitat specialization in driving compositional and phylogenetic variation across the Amazonian forest. To do so, we evaluated patterns of floristic dissimilarity and phylogenetic turnover, habitat association and phylogenetic structure in three different landscape units occurring in terra firme (Hilly and Terrace) and flooded forests (Igapó). We established two 1-ha tree plots in each of these landscape units at the Caparú Biological Station, SW Colombia, and measured edaphic, topographic and light variables. At large spatial scales, terra firme forests exhibited higher levels of species diversity and phylodiversity than flooded forests. These two types of forests showed conspicuous differences in species and phylogenetic composition, suggesting that environmental sorting due to flood is important, and can go beyond the species level. At a local level, landscape units showed floristic divergence, driven both by geographical distance and by edaphic specialization. In terms of phylogenetic structure, Igapó forests showed phylogenetic clustering, whereas Hilly and Terrace forests showed phylogenetic evenness. Within plots, however, local communities did not show any particular trend. Overall, our findings suggest that flooded forests, characterized by stressful environments, impose limits to species occurrence, whereas terra firme forests, more environmentally heterogeneous, are likely to provide a wider range of ecological conditions and therefore to bear higher diversity. Thus, Amazonia should be considered as a mosaic of landscape units, where the strength of habitat association depends upon their environmental properties. PMID:23028844

  18. Determinants of plant community assembly in a mosaic of landscape units in central Amazonia: ecological and phylogenetic perspectives.

    PubMed

    Umaña, María Natalia; Norden, Natalia; Cano, Angela; Stevenson, Pablo R

    2012-01-01

    The Amazon harbours one of the richest ecosystems on Earth. Such diversity is likely to be promoted by plant specialization, associated with the occurrence of a mosaic of landscape units. Here, we integrate ecological and phylogenetic data at different spatial scales to assess the importance of habitat specialization in driving compositional and phylogenetic variation across the Amazonian forest. To do so, we evaluated patterns of floristic dissimilarity and phylogenetic turnover, habitat association and phylogenetic structure in three different landscape units occurring in terra firme (Hilly and Terrace) and flooded forests (Igapó). We established two 1-ha tree plots in each of these landscape units at the Caparú Biological Station, SW Colombia, and measured edaphic, topographic and light variables. At large spatial scales, terra firme forests exhibited higher levels of species diversity and phylodiversity than flooded forests. These two types of forests showed conspicuous differences in species and phylogenetic composition, suggesting that environmental sorting due to flood is important, and can go beyond the species level. At a local level, landscape units showed floristic divergence, driven both by geographical distance and by edaphic specialization. In terms of phylogenetic structure, Igapó forests showed phylogenetic clustering, whereas Hilly and Terrace forests showed phylogenetic evenness. Within plots, however, local communities did not show any particular trend. Overall, our findings suggest that flooded forests, characterized by stressful environments, impose limits to species occurrence, whereas terra firme forests, more environmentally heterogeneous, are likely to provide a wider range of ecological conditions and therefore to bear higher diversity. Thus, Amazonia should be considered as a mosaic of landscape units, where the strength of habitat association depends upon their environmental properties.

  19. Ecological responses to el Niño-induced surface fires in central Brazilian Amazonia: management implications for flammable tropical forests.

    PubMed Central

    Barlow, Jos; Peres, Carlos A

    2004-01-01

    Over the past 20 years the combined effects of El Niño-induced droughts and land-use change have dramatically increased the frequency of fire in humid tropical forests. Despite the potential for rapid ecosystem alteration and the current prevalence of wildfire disturbance, the consequences of such fires for tropical forest biodiversity remain poorly understood. We provide a pan-tropical review of the current state of knowledge of these fires, and include data from a study in a seasonally dry terra firme forest of central Brazilian Amazonia. Overall, this study supports predictions that rates of tree mortality and changes in forest structure are strongly linked to burn severity. The potential consequences for biomass loss and carbon emissions are explored. Despite the paucity of data on faunal responses to tropical forest fires, some trends are becoming apparent; for example, large canopy frugivores and understorey insectivorous birds appear to be highly sensitive to changes in forest structure and composition during the first 3 years after fires. Finally, we appraise the management implications of fires and evaluate the viability of techniques and legislation that can be used to reduce forest flammability, prevent anthropogenic ignition sources from coming into contact with flammable forests and aid the post-fire recovery process. PMID:15212091

  20. Ecological responses to el Niño-induced surface fires in central Brazilian Amazonia: management implications for flammable tropical forests.

    PubMed

    Barlow, Jos; Peres, Carlos A

    2004-03-29

    Over the past 20 years the combined effects of El Niño-induced droughts and land-use change have dramatically increased the frequency of fire in humid tropical forests. Despite the potential for rapid ecosystem alteration and the current prevalence of wildfire disturbance, the consequences of such fires for tropical forest biodiversity remain poorly understood. We provide a pan-tropical review of the current state of knowledge of these fires, and include data from a study in a seasonally dry terra firme forest of central Brazilian Amazonia. Overall, this study supports predictions that rates of tree mortality and changes in forest structure are strongly linked to burn severity. The potential consequences for biomass loss and carbon emissions are explored. Despite the paucity of data on faunal responses to tropical forest fires, some trends are becoming apparent; for example, large canopy frugivores and understorey insectivorous birds appear to be highly sensitive to changes in forest structure and composition during the first 3 years after fires. Finally, we appraise the management implications of fires and evaluate the viability of techniques and legislation that can be used to reduce forest flammability, prevent anthropogenic ignition sources from coming into contact with flammable forests and aid the post-fire recovery process.

  1. a New Site at Central Amazonia Dedicated to Long Term Cloud Properties Observations - Description, First Results and Future Perspectives.

    NASA Astrophysics Data System (ADS)

    Pauliquevis, T.; Barbosa, H. M.; Adams, D. K.; Artaxo, P.; Cirino, G. G.; Barja Gonzalez, B.; Correia, A. L.; Gomes, H. B.; Gouveia, D. A.; Padua, M. B.; Rosario, N. M. E. D.; Souza, R. A. F. D.; Nascimento dos Santos, R. M.; Sapucci, L.; Portela, B. T.

    2014-12-01

    Amazon basin during the wet season is one of the few places on Earth where "natural atmosphere", as it is expected to be in pre-industrial era, can be observed. Atmosphere in clean Amazonia can be regarded as a baseline state of tropical atmosphere. Its hydrological cycle is extreme active, as well as its convection. Several scientific questions with respect to convection remain unclear. Diurnal cycle of convection is far from adequately represented in numeric models. Precipitation typically occurs in models in the first few hours in the morning, whereas actual rain occurs mostly in the early afternoon. Convection parameterizations lack the ability to represent it adequately due to the models coarse resolution of parameterizations compared to the spatial scale of shallow convection. An adequate comprehension of shallow to deep convection transition is critical to improve convection representation in models. To reach this goal, long term measurements that could characterize clouds and convection diurnal cycle are fundamental. The implementation of ACONVEX (Atmospheric CONVection EXperiment) site, situated 50 km upwind from the megacity of Manaus ( -2.894263S°, -59.971452W) aims to fill the existent gap in long term measurements. It is designed to make measurements for more than 10 yrs, and characterize cloud properties in a climatological perspective. The site started its operation in August, 2011, initially with the Raman Lidar. Present time instrumentation set comprises: 1) UV Lidar Raman, 2) CIMEL Sunphotometer, 3) MultiFilter shadow band Radiometer (MFR), 4) GNSS/GPS Receiver, 5) Vertical Pointing Radar, 6) Disdrometer, 7) Ceilometer, 8) Met station. Two sky imagers and a microwave radiometer are about to be operated and will be able to derive 1) Cloud Cover, 2) Cloud Top and Cloud Base Heights, 3) Liquid Water Content, 4) Integrated Precipitable Water, 5) PBL Height, 6) Rain Rate (vertical profile and at surface). In this poster we discuss the site in more

  2. Activity budget and social interactions in semi-captive gray woolly monkeys (Lagothrix lagotricha cana) living in an ex situ conservation area in Central Amazonia.

    PubMed

    Cartagena-Matos, Bárbara; Gasnier, Thierry; Cravo-Mota, Mariana; Martins Bezerra, Bruna

    2017-01-01

    Areas holding primates in semi-captivity conditions represent an excellent opportunity for collecting data on rare, little known, and endangered taxa, contributing with insightful information to help in their conservation. Here, we present information on the activity budget and social interactions of the elusive gray woolly monkeys, Lagothrix lagotricha cana, in an ex situ conservation area in central Amazonia. We studied the behavior of 18 semi-captive individuals through instantaneous scan and focal animal samplings during 4 months in the wet season. The most frequent activity registered was resting (45%). The remaining time was dedicated to foraging (29%), travelling (23%), social interactions (3%), and self-grooming (1%). Resting and travelling time may be correlated to fruit availability in the area through different seasons. Huddling was the most frequent social interaction, being more common from young individuals toward adult females, which may be associated with breastfeeding. Playing was more common among young males. This activity prepares them to defend themselves from possible attacks and allows them to develop their role in the social group, as future adult males. Aggression was most frequent among adults, primarily from males toward females, likely to demonstrate their dominance over females. Social grooming occurred predominantly from mother to offspring. This interaction can reduce the risk of young predation, directly increasing the female reproductive success. Our data not only add to our understanding of the sociality and behaviors of the genus Lagothrix, but may also serve as a tool to identify environments that support an adequate activity budget for these monkeys. Zoo Biol. 36:21-29, 2017. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  3. Amazonia and Global Change

    NASA Astrophysics Data System (ADS)

    Keller, Michael; Bustamante, Mercedes; Gash, John; Silva Dias, Pedro

    Amazonia and Global Change synthesizes results of the Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA) for scientists and students of Earth system science and global environmental change. LBA, led by Brazil, asks how Amazonia currently functions in the global climate and biogeochemical systems and how the functioning of Amazonia will respond to the combined pressures of climate and land use change, such as • Wet season and dry season aerosol concentrations and their effects on diffuse radiation and photosynthesis • Increasing greenhouse gas concentration, deforestation, widespread biomass burning and changes in the Amazonian water cycle • Drought effects and simulated drought through rainfall exclusion experiments • The net flux of carbon between Amazonia and the atmosphere • Floodplains as an important regulator of the basin carbon balance including serving as a major source of methane to the troposphere • The impact of the likely increased profitability of cattle ranching. The book will serve a broad community of scientists and policy makers interested in global change and environmental issues with high-quality scientific syntheses accessible to nonspecialists in a wide community of social scientists, ecologists, atmospheric chemists, climatologists, and hydrologists.

  4. Statistical properties of cloud and precipitation events in Central Amazonia using GoAmazon2014/5 data: revisiting deep convection timescales.

    NASA Astrophysics Data System (ADS)

    Pauliquevis, T.; Alves, C. F.; Barbosa, H. M.

    2016-12-01

    Previous studies in Amazon have shown a clear discrepance between models and observations of convection. From the observational stand point convection in Amazonia has a typical diurnal cycle, which is characterized by shallow convection and followed by shallow to deep transition (usually in early afternoon) and rain. Differently, numerical models based in cumulus parameterizations put heavy rain in the early hours of the morning. In this context, observations are crucial both to constraint as well to validate improvement in models. In this study we investigated statistical properties of clouds, precipitation and convection employing several instruments operated during GoAmazon2014/5-DOE/ARM at Manacapuru, AM (Brazil) combined with Cloud Top Temperature data obtained by GOES. Previous studies (e.g. Adams et al., 2013) defined deep convection events as connected to rapid CTT decrease, PWV increase (convergence) and precipitation. They also observed that the average deep convection event has two characteristic time-scales of its formation, in the sense that water vapor convergence begins to build 12 hs before precipitation, with an invigoration 4 hs before rain occur. In this study we revisited this approach using GoAmazon2014/5 measurement with special focus to its statistical variability. Preliminar results for the wet season of 2014 showed that events with rapid decrease in CTT were associated with 60% of the observed precipitation at ground. Defining t0 as the central time of CTT (rapid) decrease and analyzing only events with rain volume > 10 mm it was possible to observe that precipitation maximums distributed around t0 with mean difference Δ = 24 ± 82 minutes. Most of events presented several maxima (up to 16), and the general structure was similar to beatings in oscillatory systems. In several cases eve the first maximum of rain rate was 1 hour shifted from t0. In this presentation, the above results will be discussed combined with radiometer measurements (T

  5. New records and range expansion of the white bald uakari (Cacajao calvus calvus, I. Geoffroy, 1847) in Central Brazilian Amazonia.

    PubMed

    de Alcântara Cardoso, Nayara; Valsecchi, João; Vieira, Tatiana; Queiroz, Helder Lima

    2014-04-01

    The white bald uakari (Cacajao calvus calvus) is among the least studied of the Amazonian primates and is found exclusively in remote areas of the central Amazon. The geographic distribution of this subspecies is still uncertain, and information on current threats and its conservation status is sparse. In this paper, we identify new locations of occurrence and propose range expansion of the Cacajao calvus calvus. Between 2008 and 2010, six field expeditions were undertaken in the middle Solimões region to search for the subspecies and to conduct interviews with local residents regarding its presence. The presence of the white bald uakari was confirmed in the lower courses of the Juruá and lower Jutaí rivers, in addition to areas inside the Mamirauá Reserve, where its presence was expected. Results indicate an expansion and new limits on the geographic range of the subspecies, including its detection in areas in which it had not previously been reported and its exclusion from areas where white bald uakaris were assumed to occur. The new information provided by this study and the remaining shortcomings regarding the distribution of the calvus group point to the urgent need for further research on the geographic distribution and habitat use of this group, especially along the lower courses of the Juruá and Jutaí rivers, which remain little explored.

  6. U-Pbdating on detrital zircon and Nd and Hf isotopes related to the provenance of siliciclastic rocks of the Amazon Basin: Implications for the origin of Proto-Amazonas River

    NASA Astrophysics Data System (ADS)

    Dantas, Elton Luiz; Silva Souza, Valmir; Nogueira, Afonso C. R.; Ventura Santos, Roberto; Poitrasson, Franck; Vieira Cruz, Lucieth; Mendes Conceição, Anderson

    2014-05-01

    Previous provenance studies along the Amazonas river have demonstrated that the Amazon drainage basin has been reorganized since the Late Cretaceous with the uplift of the Andes and the establishment of the transcontinental Amazon fluvial system from Late Miocene to Late Pleistocene (Hoorn et al., 1995; Potter, 1997, Wesselingh et al., 2002; Figueiredo et al. 2009, Campbell et al., 2006, Nogueira et al. 2013).There is a lack of data from Eastern and Central Amazonia and only limited core data from the Continental Platform near to current Amazonas river mouth. Central Amazonia is strategic to unveil the origin of Amazonas River because it represents the region where the connection of the Solimões and Amazonas basin can be studied through time (Nogueira et al. 2013). Also, there is a shortage of information on the old Precambrian and Paleozoic sediment sources relative to Cretaceous and Miocene siliciclastic deposits of the Solimões and Amazonas basins. We collected stratigraphic data, detrital zircon U-Pb ages and Nd and Hf isotopes from Precambrian, Paleozoic, Cretaceous and Miocene siliciclastic deposits of the Northwestern border of Amazonas Basin. They are exposed in the Presidente Figueiredo region and in the scarps of Amazon River, and occur to the east of the Purus Arch. This Northwest-Southeast trending structural feature that divides the Solimões and Amazonas basin was active at various times since the Paleozoic. Detrital zircon ages for the Neoproterozoic Prosperança Formation yielded a complex signature, with different populations of Neoproterozoic (550, 630 and 800 Ma) and Paleoproterozoic to Archean sources (1.6, 2.1 and 2.6 Ga). Also Nd and Hf isotopes show two groups of TDM model ages between 1.4 to 1.53 Ga and 2.2 and 3.1 Ga. Sediments typical of Paleozoic sedimentary rocks of the Nhamundá and Manacapuru Formations revealed NdTDM model ages of 1.7, 2.2 and 2.7 Ga, but Hf isotopes and U-Pb zircon ages are more varied. They characterize a

  7. CCN activity and organic hygroscopicity of aerosols downwind of an urban region in central Amazonia: Seasonal and diel variations and impact of anthropogenic emissions

    DOE PAGES

    Thalman, Ryan; de Sá, Suzane S.; Palm, Brett B.; ...

    2017-03-28

    During the Observations and Modeling of the Green Ocean Amazon (GoAmazon2014/5) campaign, size-resolved cloud condensation nuclei (CCN) spectra were characterized at a research site (T3) 60km downwind of the city of Manaus, Brazil, in central Amazonia for one year (12 March 2014 to 3 March 2015). Particle hygroscopicity (κCCN) and mixing state were derived from the size-resolved CCN spectra, and the hygroscopicity of the organic component of the aerosol (κorg) was then calculated from κCCN and concurrent chemical composition measurements. The annual average κCCN increased from 0.13 at 75 nm to 0.17 at 171 nm, and the increase was largely duemore » to an increase in sulfate volume fraction. Also, during both wet and dry seasons, κCCN, κorg, and particle composition under background conditions exhibited essentially no diel variations. The constant κorg of ~0.15 is consistent with the largely uniform and high O:C value (~0.8), indicating that the aerosols under background conditions are dominated by the aged regional aerosol particles consisting of highly oxygenated organic compounds. For air masses strongly influenced by urban pollution and/or local biomass burning, lower values of κorg and organic O:C atomic ratio were observed during night, due to accumulation of freshly emitted particles, dominated by primary organic aerosol (POA) with low hygroscopicity, within a shallow nocturnal boundary layer. The O:C, κorg, and κCCN increased from the early morning hours and peaked around noon, driven by the formation and aging of secondary organic aerosol (SOA) and dilution of POA emissions into a deeper boundary layer, while the development of the boundary layer, which leads to mixing with aged particles from the residual layer aloft, likely also contributed to the increases. The hygroscopicities associated with individual organic factors, derived from PMF analysis of AMS spectra, were estimated through multi-variable linear regression. For the SOA factors

  8. A molecular phylogeny of Amazona: implications for Neotropical parrot biogeography, taxonomy, and conservation.

    PubMed

    Russello, Michael A; Amato, George

    2004-02-01

    Amazon parrots (Genus Amazona) are among the most recognizable and imperiled of all birds. Several hypotheses regarding the evolutionary history of Amazona are investigated using a combined phylogenetic analysis of DNA sequence data from six partitions including mitochondrial (COI, 12S, and 16S) and nuclear (beta-fibint7, RP40, and TROP) regions. The results demonstrate that Amazona is not monophyletic with respect to the placement of the Yellow-faced parrot (Amazona xanthops), as first implied by. In addition, the analysis corroborates previous studies suggesting a Neotropical short-tailed parrot genus as sister to Amazona. At a finer level, the phylogeny resolves the Greater Antillean endemic species as constituting a monophyletic group, including the Central American Amazona albifrons, while further revealing a paraphyletic history for the extant Amazon species of the Lesser Antilles. The reconstructed phylogeny provides further insights into the mainland sources of the Antillean Amazona, reveals areas of taxonomic uncertainty within the genus, and presents historical information that may be included in conservation priority-setting for Amazon parrots.

  9. Meteorological context of the onset and end of the rainy season in Central Amazonia during the GoAmazon2014/5

    NASA Astrophysics Data System (ADS)

    Marengo, Jose A.; Fisch, Gilberto F.; Alves, Lincoln M.; Sousa, Natanael V.; Fu, Rong; Zhuang, Yizhou

    2017-06-01

    The onset and demise of the rainy season in Amazonia are assessed in this study using meteorological data from the GoAmazon experiment, with a focus on the 2014-2015 rainy season. In addition, global reanalyses are also used to identify changes in circulation leading to the establishment of the rainy season in the region. Our results show that the onset occurred in January 2015, 2-3 pentads later than normal, and the rainy season during the austral summer of 2015 contained several periods with consecutive dry days in both Manacapuru and Manaus, which are not common for the wet season, and resulted in below-normal precipitation. The onset of the rainy season has been strongly associated with changes in large-scale weather conditions in the region due to the effect of the Madden-Julian Oscillation (MJO). Regional thermodynamic indices and the height of the boundary layer did not present a significant difference between the onset and demise of the wet season of 2015. This suggests that local changes, such as those in the regional thermodynamic characteristics, may not have influenced its onset. Thus, variability of the large-scale circulation was responsible for regional convection and rainfall changes in Amazonia during the austral summer of 2014-2015.

  10. Fires in Amazonia

    NASA Astrophysics Data System (ADS)

    Aragão, Luiz E. O. C.; Anderson, Liana O.; Lima, André; Arai, Egidio

    2016-11-01

    Fire has been used since the first humans arrived in Amazonia; however, it has recently become a widely used instrument for large-scale forest clearance. Patterns of fire incidence in the region have been exacerbated by recent drought events. Understanding temporal and spatial fire patterns as well as their consequences for forest structure, species composition, and the carbon cycle is critical for minimising global change impacts on Amazonian ecosystems and people. In this chapter, we provide an overview of the state of our knowledge on the spatial and temporal patterns of fire incidence in Amazonia, depicting the historical fire usage in the region, their relationship with land use and land cover, and their responses to climate seasonality and droughts. We subsequently focus on the impacts of fire, by quantifying the extent of burnt forests during major droughts and describing the main impacts on forest structure, composition, and carbon stocks. Finally, we present an overview of modelling initiatives for forecasting fire incidence in the region. We conclude by providing a comprehensive view of the processes that influence fire occurrence, potential feedbacks, and impacts in Amazonia. We also highlight how key areas within fire ecology must be improved for a better understanding of the long-term effect of fire on the Amazon forest 'biome'.

  11. Fires in Amazonia

    NASA Astrophysics Data System (ADS)

    Aragão, Luiz E. O. C.; Anderson, Liana O.; Lima, André Arai, Egidio

    2016-01-01

    Fire has been used since the first humans arrived in Amazonia; however, it has recently become a widely used instrument for large-scale forest clearance. Patterns of fire incidence in the region have been exacerbated by recent drought events. Understanding temporal and spatial fire patterns as well as their consequences for forest structure, species composition, and the carbon cycle is critical for minimising global change impacts on Amazonian ecosystems and people. In this chapter, we provide an overview of the state of our knowledge on the spatial and temporal patterns of fire incidence in Amazonia, depicting the historical fire usage in the region, their relationship with land use and land cover, and their responses to climate seasonality and droughts. We subsequently focus on the impacts of fire, by quantifying the extent of burnt forests during major droughts and describing the main impacts on forest structure, composition, and carbon stocks. Finally, we present an overview of modelling initiatives for forecasting fire incidence in the region. We conclude by providing a comprehensive view of the processes that influence fire occurrence, potential feedbacks, and impacts in Amazonia. We also highlight how key areas within fire ecology must be improved for a better understanding of the long-term effect of fire on the Amazon forest 'biome'.

  12. Predicting pre-Columbian anthropogenic soils in Amazonia.

    PubMed

    McMichael, C H; Palace, M W; Bush, M B; Braswell, B; Hagen, S; Neves, E G; Silman, M R; Tamanaha, E K; Czarnecki, C

    2014-02-22

    The extent and intensity of pre-Columbian impacts on lowland Amazonia have remained uncertain and controversial. Various indicators can be used to gauge the impact of pre-Columbian societies, but the formation of nutrient-enriched terra preta soils has been widely accepted as an indication of long-term settlement and site fidelity. Using known and newly discovered terra preta sites and maximum entropy algorithms (Maxent), we determined the influence of regional environmental conditions on the likelihood that terra pretas would have been formed at any given location in lowland Amazonia. Terra pretas were most frequently found in central and eastern Amazonia along the lower courses of the major Amazonian rivers. Terrain, hydrologic and soil characteristics were more important predictors of terra preta distributions than climatic conditions. Our modelling efforts indicated that terra pretas are likely to be found throughout ca 154 063 km(2) or 3.2% of the forest. We also predict that terra preta formation was limited in most of western Amazonia. Model results suggested that the distribution of terra preta was highly predictable based on environmental parameters. We provided targets for future archaeological surveys under the vast forest canopy and also highlighted how few of the long-term forest inventory sites in Amazonia are able to capture the effects of historical disturbance.

  13. Predicting pre-Columbian anthropogenic soils in Amazonia

    PubMed Central

    McMichael, C. H.; Palace, M. W.; Bush, M. B.; Braswell, B.; Hagen, S.; Neves, E. G.; Silman, M. R.; Tamanaha, E. K.; Czarnecki, C.

    2014-01-01

    The extent and intensity of pre-Columbian impacts on lowland Amazonia have remained uncertain and controversial. Various indicators can be used to gauge the impact of pre-Columbian societies, but the formation of nutrient-enriched terra preta soils has been widely accepted as an indication of long-term settlement and site fidelity. Using known and newly discovered terra preta sites and maximum entropy algorithms (Maxent), we determined the influence of regional environmental conditions on the likelihood that terra pretas would have been formed at any given location in lowland Amazonia. Terra pretas were most frequently found in central and eastern Amazonia along the lower courses of the major Amazonian rivers. Terrain, hydrologic and soil characteristics were more important predictors of terra preta distributions than climatic conditions. Our modelling efforts indicated that terra pretas are likely to be found throughout ca 154 063 km2 or 3.2% of the forest. We also predict that terra preta formation was limited in most of western Amazonia. Model results suggested that the distribution of terra preta was highly predictable based on environmental parameters. We provided targets for future archaeological surveys under the vast forest canopy and also highlighted how few of the long-term forest inventory sites in Amazonia are able to capture the effects of historical disturbance. PMID:24403329

  14. An Amazonia Symposium: Mixed Perspectives

    ERIC Educational Resources Information Center

    Huerta, Gloria; Shand, Hope

    1978-01-01

    Reporting on the second symposium on "Amazonia: Extinction or Survival" (Madison, Wisconsin, 1978), this article summarizes papers presented on colonization, health, education, law, etc., and presents the symposium's six resolutions. (JC)

  15. Microphysical And Macrophysical Characteristics Of Non-Precipitating Morning Shallow Clouds In Central Amazonia Using One-Year Of Data From GOAMAZON 2014/15 Experiment

    NASA Astrophysics Data System (ADS)

    Pauliquevis, T.; Barbosa, H. M.; Rosario, N. M. E. D.; Rizzo, L. V.; Correia, A. L.; Adams, D. K.; Calheiros, A. J. P.; Alves, C. F.

    2015-12-01

    Shallow cumulus cloud fields in Amazonia are typical of the morning hours. They play a critical role in the mean observed diurnal cycle of precipitation in the Amazon Basin, which is characterized by the occurrence of heavy precipitation events in the afternoon. Shallow clouds act both to reduce incident shortwave radiation at the surface and in the transport of humidity from the lowest portions of the troposphere to higher levels. These two processes are poorly represented in numerical models, but are critical in the transition to deep convection and associated precipitation. Numerical models have problems in properly representing shallow cumulus fields and their transition to deep precipitating convection, the net result of which is producing rainfall to early in the diurnal cycle. Due to their importance, detailed characterization of morning shallow clouds is critical for understanding the shallow-to-deep transition as well as providing for model validation purposes. In this study we report 16 month data of observations of shallow cumulus with respect to cloud cover (CC), cloud base height (CBH), liquid water path (LWP), precipitable water vapor (PWV) and GOES (Visible and IR)analysis. Results showed a consistent pattern of evolution in the cloud field throughout the morning period. After sunrise the cloud field starts to move from a random cloud field to an organized shallow clouds field. In fact, there is an absence of any pattern in CBH from 6LT to 7LT. Once some amount of radiation reaches the surface shallow convection is established around 8:00LT, when a mode of CBH at 100 m is established and rises to 900 m at noon. During this time interval, CC grows up to 50% (mean), however with significant variability and oscillations. With respect to microphysical properties, both LWP and PWV were remarkably stable for single mornings and for shallow clouds, with LWP/PWV ~ 6.10-4. All of these results are being compared with GOES observations of cloud fields (Visible

  16. Phlebotomine sand flies (Diptera: Psychodidae: Phlebotominae) in urban rainforest fragments, Manaus -- Amazonas State, Brazil.

    PubMed

    da Rocha, Liliane Coelho; de Freitas, Rui Alves; Franco, Antonia Maria Ramos

    2013-05-01

    The non-flooded upland rainforest fragment in the Federal University of Amazonas Campus is considered one of the world's largest urban tropical woodland areas and Brazil's second largest one in an urban setting. It is located in the city of Manaus, State of Amazonas at 03° 04' 34″ S, 59° 57' 30″ W, in an area covering nearly 800 hectares. Forty-one (41) sand fly species belonging to genus Lutzomyia were found attaining a total of 4662 specimens collected. Lutzomyia umbratilis was the dominant species at all heights, followed by Lutzomyia anduzei and Lutzomyia claustrei. The fauna alpha diversity index showed to be 6.4, which is not much lower than that reported for areas of continuous forest in this Amazonian region. This data provides additional evidence on Phlebotomine sand flies found to transmit Leishmania and other trypanosomatids to humans and other animals circulating in this area. This is the first study being reported on sand flies collected in an urban rainforest fragment in Amazonia. Copyright © 2013 Elsevier B.V. All rights reserved.

  17. Climate change patterns in Amazonia and biodiversity.

    PubMed

    Cheng, Hai; Sinha, Ashish; Cruz, Francisco W; Wang, Xianfeng; Edwards, R Lawrence; d'Horta, Fernando M; Ribas, Camila C; Vuille, Mathias; Stott, Lowell D; Auler, Augusto S

    2013-01-01

    Precise characterization of hydroclimate variability in Amazonia on various timescales is critical to understanding the link between climate change and biodiversity. Here we present absolute-dated speleothem oxygen isotope records that characterize hydroclimate variation in western and eastern Amazonia over the past 250 and 20 ka, respectively. Although our records demonstrate the coherent millennial-scale precipitation variability across tropical-subtropical South America, the orbital-scale precipitation variability between western and eastern Amazonia exhibits a quasi-dipole pattern. During the last glacial period, our records imply a modest increase in precipitation amount in western Amazonia but a significant drying in eastern Amazonia, suggesting that higher biodiversity in western Amazonia, contrary to 'Refugia Hypothesis', is maintained under relatively stable climatic conditions. In contrast, the glacial-interglacial climatic perturbations might have been instances of loss rather than gain in biodiversity in eastern Amazonia, where forests may have been more susceptible to fragmentation in response to larger swings in hydroclimate.

  18. Climate change patterns in Amazonia and biodiversity

    NASA Astrophysics Data System (ADS)

    Cheng, Hai; Sinha, Ashish; Cruz, Francisco W.; Wang, Xianfeng; Edwards, R. Lawrence; D'Horta, Fernando M.; Ribas, Camila C.; Vuille, Mathias; Stott, Lowell D.; Auler, Augusto S.

    2013-01-01

    Precise characterization of hydroclimate variability in Amazonia on various timescales is critical to understanding the link between climate change and biodiversity. Here we present absolute-dated speleothem oxygen isotope records that characterize hydroclimate variation in western and eastern Amazonia over the past 250 and 20 ka, respectively. Although our records demonstrate the coherent millennial-scale precipitation variability across tropical-subtropical South America, the orbital-scale precipitation variability between western and eastern Amazonia exhibits a quasi-dipole pattern. During the last glacial period, our records imply a modest increase in precipitation amount in western Amazonia but a significant drying in eastern Amazonia, suggesting that higher biodiversity in western Amazonia, contrary to ‘Refugia Hypothesis’, is maintained under relatively stable climatic conditions. In contrast, the glacial-interglacial climatic perturbations might have been instances of loss rather than gain in biodiversity in eastern Amazonia, where forests may have been more susceptible to fragmentation in response to larger swings in hydroclimate.

  19. Amazonia

    SciTech Connect

    Prance, G.T.; Lovejoy, T.E.

    1985-01-01

    IUCN is collaborating in the publication of a series of books on key environments, those areas of our remaining natural environment thought to be most severely threatened by disturbance and destruction. This book, on the Amazon basin, falls into three main parts: the physical setting; the biology; and the human impact. One of the major human impacts at present comes from deforestation, though it is difficult to estimate the rate reliably. Forest burning causes an appreciable amount of air pollution in the dry season. There is little other comment on pollution.

  20. Taxonomy and distribution of the salamander genus Bolitoglossa Duméril, Bibron & Duméril, 1854 (Amphibia, Caudata, Plethodontidae) in Brazilian Amazonia.

    PubMed

    Brcko, Isabela Carvalho; Hoogmoed, Marinus Steven; Neckel-Oliverira, Selvino

    2013-01-01

    For nearly 40 years Bolitoglossa paraensis has been synonymized with Bolitoglossa altamazonica. This fact has been mainly related to taxonomic ambiguities arising from the morphological similarities between these species and the scarcity of material deposited in collections. However, during the past 30 years new material of Bolitoglossa has been collected in many places throughout the Brazilian Amazonia, including the type locality of B. paraensis, Santa Isabel do Pará. In this article we designate the neotype of B. paraensis based on new material from the type locality, correct misinterpretations about this name. We determined how many species of the genus Bolitoglossa occur in Brazilian Amazonia, described three new species, B. caldwellae sp. nov., B. madeira sp. nov., and B. tapajonica sp. nov., provide a key for identifying Brazilian salamanders. Were analyzed two hundred and seventy eight specimens of Bolitoglossa from the Brazilian states of Acre, Amapá, Amazonas, Pará, and Rondonia; morphological data ofB. altamazonica from Colombia were used for comparison purposes. We confirm the presence of B. altamazonica in extreme western Brazil, and expand the number of species occurring in Brazilian Amazonia to five.

  1. Sparse pre-Columbian human habitation in western Amazonia.

    PubMed

    McMichael, C H; Piperno, D R; Bush, M B; Silman, M R; Zimmerman, A R; Raczka, M F; Lobato, L C

    2012-06-15

    Locally extensive pre-Columbian human occupation and modification occurred in the forests of the central and eastern Amazon Basin, but whether comparable impacts extend westward and into the vast terra firme (interfluvial) zones, remains unclear. We analyzed soils from 55 sites across central and western Amazonia to assess the history of human occupation. Sparse occurrences of charcoal and the lack of phytoliths from agricultural and disturbance species in the soils during pre-Columbian times indicated that human impacts on interfluvial forests were small, infrequent, and highly localized. No human artifacts or modified soils were found at any site surveyed. Riverine bluff areas also appeared less heavily occupied and disturbed than similar settings elsewhere. Our data indicate that human impacts on Amazonian forests were heterogeneous across this vast landscape.

  2. Non-Official Roads Dilemma in Amazonia

    NASA Technical Reports Server (NTRS)

    Perz, Stephen G.; Arima, Eugenio; Souza, Carlos, Jr.; Caldas, Marcellus; Brandao, Amintas de O., Jr.; Araujo de Souza, Francisco Kennedy; Walker, Robert

    2005-01-01

    At the beginning of this millennium, "non-official" roads predominate in Amazonia. The opening of these roads, a phenomenon that has not been studied in depth, represents a major dilemma - it generates environmental and social impacts, but it helps to reduce the isolation of the communities in Amazonia and to improve the quality of life for those rural populations. The combined positive and negative aspects of this dilemma mean that it is a matter of crucial importance for the government at last to do a proper job in building these roads; if this is disregarded, in the future, the environment and the Brazilians living in that region will be at risk.

  3. Non-Official Roads Dilemma in Amazonia

    NASA Technical Reports Server (NTRS)

    Perz, Stephen G.; Arima, Eugenio; Souza, Carlos, Jr.; Caldas, Marcellus; Brandao, Amintas de O., Jr.; Araujo de Souza, Francisco Kennedy; Walker, Robert

    2005-01-01

    At the beginning of this millennium, "non-official" roads predominate in Amazonia. The opening of these roads, a phenomenon that has not been studied in depth, represents a major dilemma - it generates environmental and social impacts, but it helps to reduce the isolation of the communities in Amazonia and to improve the quality of life for those rural populations. The combined positive and negative aspects of this dilemma mean that it is a matter of crucial importance for the government at last to do a proper job in building these roads; if this is disregarded, in the future, the environment and the Brazilians living in that region will be at risk.

  4. Ecological adaptation of wild peach palm, its in situ conservation and deforestation-mediated extinction in southern Brazilian Amazonia.

    PubMed

    Clement, Charles R; Santos, Ronaldo P; Desmouliere, Sylvain J M; Ferreira, Evandro J L; Neto, João Tomé Farias

    2009-01-01

    The Arc of Fire across southern Amazonia seasonally attracts worldwide attention as forests are cut and burned for agricultural expansion. These forests contain numerous wild relatives of native South American crops, such as peach palm. Our prospecting expeditions examined critical areas for wild peach palm in the Arc of Fire in Mato Grosso, Pará, Maranhão and Tocantins, as well as areas not previously examined in Amazonas and Amapá states. Recent digitization of the RADAM Brasil project permitted comparison among RADAM's parataxonomists' observations, previous botanical collections and our prospecting. Mapping on soils and vegetation types enabled us to hypothesize a set of ecological preferences. Wild peach palm is best adapted to Ultisols (Acrisols) in open forests across the Arc of Fire and westward into the more humid western Amazonia. Populations are generally small (fewer than 10 plants) on slopes above watercourses. In northern Mato Grosso and southern Pará soybean fields and pastures now occupy numerous areas where RADAM identified wild peach palm. The controversial BR-163 Highway is already eroding wild peach palm as deforestation expands. Many of these populations are now isolated by increasing forest fragmentation, which will lead to decreased reproduction via inbreeding depression and eventual extinction even without complete deforestation. Federal conservation areas are less numerous in the Arc of Fire than in other parts of Brazilian Amazonia, although there are indigenous lands; these conservation areas contain viable populations of wild peach palm and require better protection than they are currently receiving. Ex situ conservation of these populations is not viable given the relative lack of importance of domesticated peach palm and the difficulty of maintaining even economically interesting genetic resources.

  5. Ecological Adaptation of Wild Peach Palm, Its In Situ Conservation and Deforestation-Mediated Extinction in Southern Brazilian Amazonia

    PubMed Central

    Clement, Charles R.; Santos, Ronaldo P.; Desmouliere, Sylvain J. M.; Ferreira, Evandro J. L.; Neto, João Tomé Farias

    2009-01-01

    Background The Arc of Fire across southern Amazonia seasonally attracts worldwide attention as forests are cut and burned for agricultural expansion. These forests contain numerous wild relatives of native South American crops, such as peach palm. Methodology/Principal Findings Our prospecting expeditions examined critical areas for wild peach palm in the Arc of Fire in Mato Grosso, Pará, Maranhão and Tocantins, as well as areas not previously examined in Amazonas and Amapá states. Recent digitization of the RADAM Brasil project permitted comparison among RADAM's parataxonomists' observations, previous botanical collections and our prospecting. Mapping on soils and vegetation types enabled us to hypothesize a set of ecological preferences. Wild peach palm is best adapted to Ultisols (Acrisols) in open forests across the Arc of Fire and westward into the more humid western Amazonia. Populations are generally small (fewer than 10 plants) on slopes above watercourses. In northern Mato Grosso and southern Pará soybean fields and pastures now occupy numerous areas where RADAM identified wild peach palm. The controversial BR-163 Highway is already eroding wild peach palm as deforestation expands. Conclusions/Significance Many of these populations are now isolated by increasing forest fragmentation, which will lead to decreased reproduction via inbreeding depression and eventual extinction even without complete deforestation. Federal conservation areas are less numerous in the Arc of Fire than in other parts of Brazilian Amazonia, although there are indigenous lands; these conservation areas contain viable populations of wild peach palm and require better protection than they are currently receiving. Ex situ conservation of these populations is not viable given the relative lack of importance of domesticated peach palm and the difficulty of maintaining even economically interesting genetic resources. PMID:19238213

  6. The domestication of Amazonia before European conquest.

    PubMed

    Clement, Charles R; Denevan, William M; Heckenberger, Michael J; Junqueira, André Braga; Neves, Eduardo G; Teixeira, Wenceslau G; Woods, William I

    2015-08-07

    During the twentieth century, Amazonia was widely regarded as relatively pristine nature, little impacted by human history. This view remains popular despite mounting evidence of substantial human influence over millennial scales across the region. Here, we review the evidence of an anthropogenic Amazonia in response to claims of sparse populations across broad portions of the region. Amazonia was a major centre of crop domestication, with at least 83 native species containing populations domesticated to some degree. Plant domestication occurs in domesticated landscapes, including highly modified Amazonian dark earths (ADEs) associated with large settled populations and that may cover greater than 0.1% of the region. Populations and food production expanded rapidly within land management systems in the mid-Holocene, and complex societies expanded in resource-rich areas creating domesticated landscapes with profound impacts on local and regional ecology. ADE food production projections support estimates of at least eight million people in 1492. By this time, highly diverse regional systems had developed across Amazonia where subsistence resources were created with plant and landscape domestication, including earthworks. This review argues that the Amazonian anthrome was no less socio-culturally diverse or populous than other tropical forested areas of the world prior to European conquest.

  7. The domestication of Amazonia before European conquest

    PubMed Central

    Clement, Charles R.; Denevan, William M.; Heckenberger, Michael J.; Junqueira, André Braga; Neves, Eduardo G.; Teixeira, Wenceslau G.; Woods, William I.

    2015-01-01

    During the twentieth century, Amazonia was widely regarded as relatively pristine nature, little impacted by human history. This view remains popular despite mounting evidence of substantial human influence over millennial scales across the region. Here, we review the evidence of an anthropogenic Amazonia in response to claims of sparse populations across broad portions of the region. Amazonia was a major centre of crop domestication, with at least 83 native species containing populations domesticated to some degree. Plant domestication occurs in domesticated landscapes, including highly modified Amazonian dark earths (ADEs) associated with large settled populations and that may cover greater than 0.1% of the region. Populations and food production expanded rapidly within land management systems in the mid-Holocene, and complex societies expanded in resource-rich areas creating domesticated landscapes with profound impacts on local and regional ecology. ADE food production projections support estimates of at least eight million people in 1492. By this time, highly diverse regional systems had developed across Amazonia where subsistence resources were created with plant and landscape domestication, including earthworks. This review argues that the Amazonian anthrome was no less socio-culturally diverse or populous than other tropical forested areas of the world prior to European conquest. PMID:26202998

  8. Mapping landscape scale variations of forest structure, biomass, and productivity in Amazonia

    NASA Astrophysics Data System (ADS)

    Saatchi, S.; Malhi, Y.; Zutta, B.; Buermann, W.; Anderson, L. O.; Araujo, A. M.; Phillips, O. L.; Peacock, J.; Ter Steege, H.; Lopez Gonzalez, G.; Baker, T.; Arroyo, L.; Almeida, S.; Higuchi, N.; Killeen, T.; Monteagudo, A.; Neill, D.; Pitman, N.; Prieto, A.; Salomão, R.; Silva, N.; Vásquez Martínez, R.; Laurance, W.; Ramírez, H. A.

    2009-06-01

    Landscape and environmental variables such as topography, geomorphology, soil types, and climate are important factors affecting forest composition, structure, productivity, and biomass. Here, we combine a network of forest inventories with recently developed global data products from satellite observations in modeling the potential distributions of forest structure and productivity in Amazonia and examine how geomorphology, soil, and precipitation control these distributions. We use the RAINFOR network of forest plots distributed in lowland forests across Amazonia, and satellite observations of tree cover, leaf area index, phenology, moisture, and topographical variations. A maximum entropy estimation (Maxent) model is employed to predict the spatial distribution of several key forest structure parameters: basal area, fraction of large trees, fraction of palms, wood density, productivity, and above-ground biomass at 5 km spatial resolution. A series of statistical tests at selected thresholds as well as across all thresholds and jackknife analysis are used to examine the accuracy of distribution maps and the relative contributions of environmental variables. The final maps were interpreted using soil, precipitation, and geomorphological features of Amazonia and it was found that the length of dry season played a key role in impacting the distribution of all forest variables except the wood density. Soil type had a significant impact on the wood productivity. Most high productivity forests were distributed either on less infertile soils of western Amazonia and Andean foothills, on crystalline shields, and younger alluvial deposits. Areas of low elevation and high density of small rivers of Central Amazonia showed distinct features, hosting mainly forests with low productivity and smaller trees.

  9. A medium-spatial scale distribution pattern of Pseudoscorpionida (Arachnida) in a gradient of topography (altitude and inclination), soil factors, and litter in a central Amazonia forest reserve, Brazil.

    PubMed

    Aguiar, N O; Gualberto, T L; Franklin, E

    2006-08-01

    In Amazonia, nothing is known about the distribution of the invertebrates on a medium-spatial scale pattern. In a trail system of 64 km2 at Ducke Reserve, we sampled 72 transects using the hand-sorting method and Berlese-Tullgren extraction. The reserve possesses ecosystems of "terra-firme" forest and the trail system represents a gradient of topographic soil factors and vegetation, avoiding categorizations. Considering the abundance and diversity of Pseudoscorpionida, we investigated the relation of the community to environmental factors tested (topography, clay percentage, litter, and soil pH), to the two major drainage basins of the reserve, and if these invertebrates can be used as biological indicators to monitor changes. We registered two species for the first time in the reserve, increasing the known diversity to 17 species. The lack of correlation with the predictor variables and the large home range, indicate that pseudoscorpions are not good biological indicators in the reserve. As the eastern and western watersheds are not separate management units for the community, our results show that they are generalist predators. In spite of our results and lack of knowledge concerning their biology, life history and taxonomy, pseudoscorpions are cosmopolitan and easy to find and measure. Compared with previous studies in the reserve, they have a consistent pattern of abundance and diversity throughout the years showing the stability of the community which can be checked mainly by comparison with environmental changes that would occur in the reserve. An investigation on a medium-spatial scale pattern and over a long-term period including other habitats, and also other predictor variables, like humidity, the structure of the vegetation and canopy closure, will be necessary to reinforce the observed tendencies.

  10. Amazonas project: Application of remote sensing techniques for the integrated survey of natural resources in Amazonas. [Brazil

    NASA Technical Reports Server (NTRS)

    Dejesusparada, N. (Principal Investigator)

    1981-01-01

    The use of LANDSAT multispectral scanner and return beam vidicon imagery for surveying the natural resources of the Brazilian Amazonas is described. Purposes of the Amazonas development project are summarized. The application of LANDSAT imagery to identification of vegetation coverage and soil use, identification of soil types, geomorphology, and geology and highway planning is discussed. An evaluation of the worth of LANDSAT imagery in mapping the region is presented. Maps generated by the project are included.

  11. Late Miocene sedimentary environments in south-western Amazonia (Solimões Formation; Brazil).

    PubMed

    Gross, Martin; Piller, Werner E; Ramos, Maria Ines; Douglas da Silva Paz, Jackson

    2011-08-01

    In Miocene times a vast wetland existed in Western Amazonia. Whereas the general development of this amazing ecosystem is well established, many questions remain open on sedimentary environments, stratigraphical correlations as well as its palaeogeographical configuration. Several outcrops located in a barely studied region around Eirunepé (SW Amazonas state, Brazil) were investigated to obtain basic sedimentological data. The observed deposits belong to the upper part of the Solimões Formation and are biostratigraphically dated to the Late Miocene. Vertically as well as laterally highly variable fine-grained clastic successions were recorded. Based on the lithofacies assemblages, these sediments represent fluvial deposits, possibly of an anastomosing river system. Sand bodies formed within active channels and dominant overbank fines are described (levees, crevasse splays/channels/deltas, abandoned channels, backswamps, floodplain paleosols). Lacustrine environments are restricted to local floodplain ponds/lakes. The mollusc and ostracod content as well as very light δ(18)O and δ(13)C values, measured on ostracod valves, refer to exclusively freshwater conditions. Based on palaeontological and geological results the existence of a long-lived lake ("Lake Pebas") or any influx of marine waters can be excluded for that region during the Late Miocene.

  12. Late Miocene sedimentary environments in south-western Amazonia (Solimões Formation; Brazil)

    PubMed Central

    Gross, Martin; Piller, Werner E.; Ramos, Maria Ines; Douglas da Silva Paz, Jackson

    2011-01-01

    In Miocene times a vast wetland existed in Western Amazonia. Whereas the general development of this amazing ecosystem is well established, many questions remain open on sedimentary environments, stratigraphical correlations as well as its palaeogeographical configuration. Several outcrops located in a barely studied region around Eirunepé (SW Amazonas state, Brazil) were investigated to obtain basic sedimentological data. The observed deposits belong to the upper part of the Solimões Formation and are biostratigraphically dated to the Late Miocene. Vertically as well as laterally highly variable fine-grained clastic successions were recorded. Based on the lithofacies assemblages, these sediments represent fluvial deposits, possibly of an anastomosing river system. Sand bodies formed within active channels and dominant overbank fines are described (levees, crevasse splays/channels/deltas, abandoned channels, backswamps, floodplain paleosols). Lacustrine environments are restricted to local floodplain ponds/lakes. The mollusc and ostracod content as well as very light δ18O and δ13C values, measured on ostracod valves, refer to exclusively freshwater conditions. Based on palaeontological and geological results the existence of a long-lived lake (“Lake Pebas”) or any influx of marine waters can be excluded for that region during the Late Miocene. PMID:26523089

  13. Holocene fire and occupation in Amazonia: records from two lake districts.

    PubMed

    Bush, Mark B; Silman, Miles R; de Toledo, Mauro B; Listopad, Claudia; Gosling, William D; Williams, Christopher; de Oliveira, Paulo E; Krisel, Carolyn

    2007-02-28

    While large-scale pre-Columbian human occupation and ecological disturbance have been demonstrated close to major Amazonian waterways, less is known of sites in terra firme settings. Palaeoecological analyses of two lake districts in central and western Amazonia reveal long histories of occupation and land use. At both locations, human activity was centred on one of the lakes, while the others were either lightly used or unused. These analyses indicate that the scale of human impacts in these terra firme settings is localized and probably strongly influenced by the presence of a permanent open-water body. Evidence is found of forest clearance and cultivation of maize and manioc. These data are directly relevant to the resilience of Amazonian conservation, as they do not support the contention that all of Amazonia is a 'built landscape' and therefore a product of past human land use.

  14. New species and new records of Manota Williston from Colombia, Brazilian Amazonia, and Costa Rica (Diptera, Mycetophilidae).

    PubMed

    Kurina, Olavi; Hippa, Heikki; Amorim, Dalton de Souza

    2017-01-01

    The following five species are described as new: Manota clavasp. n. (Colombia), Manota multilobatasp. n. (Colombia), Manota perplexasp. n. (Costa Rica), Manota setilobatasp. n. (Colombia) and Manota subaristatasp. n. (Colombia). In addition, new records for the following 11 species are presented: Manota acuminata Jaschhof & Hippa, 2005 (Costa Rica), Manota arenalensis Jaschhof & Hippa, 2005 (Costa Rica), Manota corcovado Jaschhof & Hippa, 2005 (Costa Rica), Manota costaricensis Jaschhof & Hippa, 2005 (Costa Rica), Manota diversiseta Jaschhof & Hippa, 2005 (Colombia, Brazilian Amazonia, Costa Rica), Manota minutula Hippa, Kurina & Sääksjärvi, 2017 (Brazilian Amazonia), Manota multisetosa Jaschhof & Hippa, 2005 (Costa Rica), Manota parva Jaschhof & Hippa, 2005 (Colombia, Costa Rica), Manota pisinna Hippa & Kurina, 2013 (Brazilian Amazonia), Manota spinosa Jaschhof & Hippa, 2005 (Colombia) and Manota squamulata Jaschhof & Hippa, 2005 (Costa Rica). Distribution patterns include (1) species known only locally in Costa Rica or Colombia, (2) distributions connecting Central America to west Andes lowlands, and (3) north-west Neotropical components, extending from Central America to Brazilian Amazonia. The possible biogeographical and taxonomical context of Manota species with a widespread distribution is considered.

  15. New species and new records of Manota Williston from Colombia, Brazilian Amazonia, and Costa Rica (Diptera, Mycetophilidae)

    PubMed Central

    Kurina, Olavi; Hippa, Heikki; Amorim, Dalton de Souza

    2017-01-01

    Abstract The following five species are described as new: Manota clava sp. n. (Colombia), Manota multilobata sp. n. (Colombia), Manota perplexa sp. n. (Costa Rica), Manota setilobata sp. n. (Colombia) and Manota subaristata sp. n. (Colombia). In addition, new records for the following 11 species are presented: Manota acuminata Jaschhof & Hippa, 2005 (Costa Rica), Manota arenalensis Jaschhof & Hippa, 2005 (Costa Rica), Manota corcovado Jaschhof & Hippa, 2005 (Costa Rica), Manota costaricensis Jaschhof & Hippa, 2005 (Costa Rica), Manota diversiseta Jaschhof & Hippa, 2005 (Colombia, Brazilian Amazonia, Costa Rica), Manota minutula Hippa, Kurina & Sääksjärvi, 2017 (Brazilian Amazonia), Manota multisetosa Jaschhof & Hippa, 2005 (Costa Rica), Manota parva Jaschhof & Hippa, 2005 (Colombia, Costa Rica), Manota pisinna Hippa & Kurina, 2013 (Brazilian Amazonia), Manota spinosa Jaschhof & Hippa, 2005 (Colombia) and Manota squamulata Jaschhof & Hippa, 2005 (Costa Rica). Distribution patterns include (1) species known only locally in Costa Rica or Colombia, (2) distributions connecting Central America to west Andes lowlands, and (3) north-west Neotropical components, extending from Central America to Brazilian Amazonia. The possible biogeographical and taxonomical context of Manota species with a widespread distribution is considered. PMID:28769645

  16. The phlebotomine sandflies of Venezuelan Amazonia.

    PubMed

    Feliciangeli, M D; Ramirez Perez, J; Ramirez, A

    1988-01-01

    Phlebotomine sandflies were surveyed in two ecologically contrasted areas, the northern moist and southern wet tropical forests, of the Territorio Federal Amazonas, Venezuela. Three new taxa and twenty-one new records were added to the previously known species list for Venezuelan sandflies, which now totals eighty species. Both sexes of Lutzomyia (Psychodopygus) killicki sp.n., L. (Trichophoryomyia) bettinii sp.n., L. (Nyssomyia) olmeca reducta subsp.n. and and the females of L. bernalei Osorno et al., Brumptomyia pintoi Costa Lima and L. begonae (Ortiz & Torres) are described and illustrated.

  17. Larva of Palaemnema brasiliensis Machado (Odonata: Platystictidae), from Amazonas, Brazil.

    PubMed

    Neiss, Ulisses Gaspar; Hamada, Neusa

    2016-02-09

    The larva of Palaemnema brasiliensis Machado, 2009 is described and illustrated based on last-instar larvae and exuviae of reared larvae collected in a blackwater stream in Barcelos and Presidente Figueiredo municipalities, Amazonas state, Brazil. The larva of P. brasiliensis can be distinguished from the two South American species of the genus with described larvae (P. clementia Selys and P. mutans Calvert), mainly by presence of a single obtuse cusp on the labial palp, the presence and configuration of setae in the caudal lamellae, and the proportional length of terminal filaments of the caudal lamellae. The family is recorded here for the first time in Brazilian state of Amazonas.

  18. YERSINIA PSEUDOTUBERCULOSIS, SEROGROUP O:1A, INFECTION IN TWO AMAZON PARROTS (AMAZONA AESTIVA AND AMAZONA ORATRIX) WITH HEPATIC HEMOSIDEROSIS.

    PubMed

    Galosi, Livio; Farneti, Silvana; Rossi, Giacomo; Cork, Susan Catherine; Ferraro, Stefano; Magi, Gian Enrico; Petrini, Stefano; Valiani, Andrea; Cuteri, Vincenzo; Attili, Anna-Rita

    2015-09-01

    Necropsies were conducted on a female blue-fronted Amazon (Amazona aestiva) and a female yellow-headed Amazon (Amazona oratrix) that died after depression, ruffled feathers, diarrhea, and biliverdin in the urine. Gross and microscopic examinations revealed multifocal necrosis in the liver, spleen, lungs, kidneys, intestines, and heart caused by acute bacteremia. Yersinia pseudotuberculosis, serogroup O:1a, was isolated by culturing from the visceral lesions in the liver, intestines, and spleen. Virulence gene analysis showed the presence of the inv gene and the complete pathogenicity island: IS100, psn, yptE, irp1, irp2 ybtP-ybtQ, ybtX-ybtS, and int asnT-Int. Histopathologic findings and chemical analysis also demonstrated hepatic hemosiderosis. As has been demonstrated in other species, hemosiderosis may predispose Amazona spp. to systemic infection with Y. pseudotuberculosis after enteric disease.

  19. A new parrot taxon from the Yucatán Peninsula, Mexico-its position within genus Amazona based on morphology and molecular phylogeny.

    PubMed

    Silva, Tony; Guzmán, Antonio; Urantówka, Adam D; Mackiewicz, Paweł

    2017-01-01

    Parrots (Psittaciformes) are a diverse group of birds which need urgent protection. However, many taxa from this order have an unresolved status, which makes their conservation difficult. One species-rich parrot genus is Amazona, which is widely distributed in the New World. Here we describe a new Amazona form, which is endemic to the Yucatán Peninsula. This parrot is clearly separable from other Amazona species in eleven morphometric characters as well as call and behavior. The clear differences in these features imply that the parrot most likely represents a new species. In contrast to this, the phylogenetic tree based on mitochondrial markers shows that this parrot groups with strong support within A. albifrons from Central America, which would suggest that it is a subspecies of A. albifrons. However, taken together tree topology tests and morphometric analyses, we can conclude that the new parrot represents a recently evolving species, whose taxonomic status should be further confirmed. This lineage diverged from its closest relative about 120,000 years ago and was subjected to accelerated morphological and behavioral changes like some other representatives of the genus Amazona. Our phylogenies, which are so far the most comprehensive for Amazona taxa enabled us to consider the most feasible scenarios about parrot colonization of the Greater and Lesser Antilles and Central America from South America mainland. The molecular dating of these migrations and diversification rate were correlated with climatic and geological events in the last five million years, giving an interesting insight into Amazon parrot phylogeography and their evolution in general.

  20. A new parrot taxon from the Yucatán Peninsula, Mexico—its position within genus Amazona based on morphology and molecular phylogeny

    PubMed Central

    Guzmán, Antonio; Urantówka, Adam D.; Mackiewicz, Paweł

    2017-01-01

    Parrots (Psittaciformes) are a diverse group of birds which need urgent protection. However, many taxa from this order have an unresolved status, which makes their conservation difficult. One species-rich parrot genus is Amazona, which is widely distributed in the New World. Here we describe a new Amazona form, which is endemic to the Yucatán Peninsula. This parrot is clearly separable from other Amazona species in eleven morphometric characters as well as call and behavior. The clear differences in these features imply that the parrot most likely represents a new species. In contrast to this, the phylogenetic tree based on mitochondrial markers shows that this parrot groups with strong support within A. albifrons from Central America, which would suggest that it is a subspecies of A. albifrons. However, taken together tree topology tests and morphometric analyses, we can conclude that the new parrot represents a recently evolving species, whose taxonomic status should be further confirmed. This lineage diverged from its closest relative about 120,000 years ago and was subjected to accelerated morphological and behavioral changes like some other representatives of the genus Amazona. Our phylogenies, which are so far the most comprehensive for Amazona taxa enabled us to consider the most feasible scenarios about parrot colonization of the Greater and Lesser Antilles and Central America from South America mainland. The molecular dating of these migrations and diversification rate were correlated with climatic and geological events in the last five million years, giving an interesting insight into Amazon parrot phylogeography and their evolution in general. PMID:28674651

  1. Monitoring Fires in Southwestern Amazonia Rain Forests

    NASA Astrophysics Data System (ADS)

    Brown, I. Foster; Schroeder, Wilfrid; Setzer, Alberto; de Los Rios Maldonado, Monica; Pantoja, Nara; Duarte, Alejandro; Marengo, Jose

    2006-06-01

    From mid-July to mid-October 2005, an environmental disaster unfolded in the trinational region of Madre de Dios, Peru; Acre, Brazil; and Pando, Bolivia (the MAP region), in southwestern Amazonia. A prolonged dry season and human-initiated fires resulted in smoke pollution affecting more than 400,000 persons, fire damage to over 300,000 hectares of rain forest, and over US$50 million of direct economic losses. Indicators suggest that anomalous drought conditions could occur again this year.

  2. Carbon stock loss from deforestation through 2013 in Brazilian Amazonia.

    PubMed

    Nogueira, Euler Melo; Yanai, Aurora M; Fonseca, Frederico O R; Fearnside, Philip Martin

    2015-03-01

    The largest carbon stock in tropical vegetation is in Brazilian Amazonia. In this ~5 million km(2) area, over 750,000 km(2) of forest and ~240,000 km(2) of nonforest vegetation types had been cleared through 2013. We estimate current carbon stocks and cumulative gross carbon loss from clearing of premodern vegetation in Brazil's 'Legal Amazonia' and 'Amazonia biome' regions. Biomass of 'premodern' vegetation (prior to major increases in disturbance beginning in the 1970s) was estimated by matching vegetation classes mapped at a scale of 1 : 250,000 and 29 biomass means from 41 published studies for vegetation types classified as forest (2317 1-ha plots) and as either nonforest or contact zones (1830 plots and subplots of varied size). Total biomass (above and below-ground, dry weight) underwent a gross reduction of 18.3% in Legal Amazonia (13.1 Pg C) and 16.7% in the Amazonia biome (11.2 Pg C) through 2013, excluding carbon loss from the effects of fragmentation, selective logging, fires, mortality induced by recent droughts and clearing of forest regrowth. In spite of the loss of carbon from clearing, large amounts of carbon were stored in stands of remaining vegetation in 2013, equivalent to 149 Mg C ha(-1) when weighted by the total area covered by each vegetation type in Legal Amazonia. Native vegetation in Legal Amazonia in 2013 originally contained 58.6 Pg C, while that in the Amazonia biome contained 56 Pg C. Emissions per unit area from clearing could potentially be larger in the future because previously cleared areas were mainly covered by vegetation with lower mean biomass than the remaining vegetation. Estimates of original biomass are essential for estimating losses to forest degradation. This study offers estimates of cumulative biomass loss, as well as estimates of premodern carbon stocks that have not been represented in recent estimates of deforestation impacts. © 2014 John Wiley & Sons Ltd.

  3. Holocene development of Amazonia's oldest peatland

    NASA Astrophysics Data System (ADS)

    Swindles, Graeme T.; Morris, Paul J.; Whitney, Bronwen; Galka, Mariusz; Galloway, Jennifer M.; Gallego-Sala, Angela; Macumber, Andrew L.; Mullan, Donal; Smith, Mark W.; Amesbury, Matt; Roland, Thomas; Sanei, Hameed; Patterson, R. Timothy; Parry, Lauren; Charman, Dan J.; Lopez, Omar R.; Valderamma, Elvis; Watson, Elizabeth J.; Lähteenoja, Outi; Baird, Andy J.

    2017-04-01

    Peatlands represent some of the most carbon-dense ecosystems of Amazonia. However, little is known about the mechanisms of Amazonian peatland development and their ecohydrological dynamics over time. We present a comprehensive multiproxy dataset from Aucayacu peat dome, the oldest peatland yet discovered in Amazonia (peat initiation occurred between 8.9 and 5.8 ka cal. BP). Our dataset includes analyses of peat physical properties, carbon and nitrogen, humification, organic matter characteristics, macrofossils, pollen, charcoal and testate amoebae. Sedimentological techniques were applied to minerogenic deposits underneath the peatland to understand the nature of the floodplain environment before peat initiation. A transfer function was used to reconstruct past hydrological conditions from subfossil testate amoeba assemblages and carbon accumulation (CA) rates were determined from bulk density and percentage carbon data. A robust chronology was achieved using 210Pb and 14C (14 radiocarbon dates on a 3-m core) determinations, modelled using a Bayesian approach. We used the datasets to investigate the long-term ecohydrological development and controls on carbon accumulation in an Amazonian peat dome. The peatland developed in three distinct stages; (i) abandoned river channel with standing open water and aquatic plants; (ii) inundated forest swamp; and (iii) ombrotrophic bog ( 3.9 ka cal. BP). Local burning occurred twice during the peatland's development as evidenced by macroscopic charcoal but appears to have become more pronounced in the last 100 years. We present a conceptual model of the role of autogenic and allogenic (climate, floodplain) processes on the long-term development of the peatland and the marked variations in carbon accumulation rates over the Holocene. Amazonian peatlands are important carbon stores and ecosystems, and represent important archives of past climatic and ecological information. They should form key foci for conservation efforts.

  4. Palynostratigraphy and sedimentary facies of Middle Miocene fluvial deposits of the Amazonas Basin, Brazil

    NASA Astrophysics Data System (ADS)

    Dino, Rodolfo; Soares, Emílio Alberto Amaral; Antonioli, Luzia; Riccomini, Claudio; Nogueira, Afonso César Rodrigues

    2012-03-01

    crystalline. The palynological analysis results presented herein are the first direct and unequivocal evidence of the occurrence of Middle Miocene deposits in the central part of the Amazonas Basin. They also provide new perspectives for intra- and interbasin correlations, as well as paleogeographic and paleoenvironmental interpretations for the later deposition stages in the northern Brazilian sedimentary basins.

  5. Stress perturbation associated with the Amazonas and other ancient continental rifts

    USGS Publications Warehouse

    Zoback, M.L.; Richardson, R.M.

    1996-01-01

    The state of stress in the vicinity of old continental rifts is examined to investigate the possibility that crustal structure associated with ancient rifts (specifically a dense rift pillow in the lower crust) may modify substantially the regional stress field. Both shallow (2.0-2.6 km depth) breakout data and deep (20-45 km depth) crustal earthquake focal mechanisms indicate a N to NNE maximum horizontal compression in the vicinity of the Paleozoic Amazonas rift in central Brazil. This compressive stress direction is nearly perpendicular to the rift structure and represents a ???75?? rotation relative to a regional E-W compressive stress direction in the South American plate. Elastic two-dimensional finite element models of the density structure associated with the Amazonas rift (as inferred from independent gravity modeling) indicate that elastic support of this dense feature would generate horizontal rift-normal compressional stresses between 60 and 120 MPa, with values of 80-100 MPa probably most representative of the overall structure. The observed ???75?? stress rotation constrains the ratio of the regional horizontal stress difference to the rift-normal compressive stress to be between 0.25 and 1.0, suggesting that this rift-normal stress may be from 1 to 4 times larger than the regional horizontal stress difference. A general expression for the modification of the normalized local horizontal shear stress (relative to the regional horizontal shear stress) shows that the same ratio of the rift-normal compression relative to the regional horizontal stress difference, which controls the amount of stress rotation, also determines whether the superposed stress increases or decreases the local maximum horizontal shear stress. The potential for fault reactivation of ancient continental rifts in general is analyzed considering both the local stress rotation and modification of horizontal shear stress for both thrust and strike-slip stress regimes. In the Amazonas

  6. Stress perturbation associated with the Amazonas and other ancient continental rifts

    NASA Astrophysics Data System (ADS)

    Zoback, Mary Lou; Richardson, Randall M.

    1996-03-01

    The state of stress in the vicinity of old continental rifts is examined to investigate the possibility that crustal structure associated with ancient rifts (specifically a dense rift pillow in the lower crust) may modify substantially the regional stress field. Both shallow (2.0-2.6 km depth) breakout data and deep (20-45 km depth) crustal earthquake focal mechanisms indicate a N to NNE maximum horizontal compression in the vicinity of the Paleozoic Amazonas rift in central Brazil. This compressive stress direction is nearly perpendicular to the rift structure and represents a ˜75° rotation relative to a regional E-W compressive stress direction in the South American plate. Elastic two-dimensional finite element models of the density structure associated with the Amazonas rift (as inferred from independent gravity modeling) indicate that elastic support of this dense feature would generate horizontal rift-normal compressional stresses between 60 and 120 MPa, with values of 80-100 MPa probably most representative of the overall structure. The observed ˜75° stress rotation constrains the ratio of the regional horizontal stress difference to the rift-normal compressive stress to be between 0.25 and 1.0, suggesting that this rift-normal stress may be from 1 to 4 times larger than the regional horizontal stress difference. A general expression for the modification of the normalized local horizontal shear stress (relative to the regional horizontal shear stress) shows that the same ratio of the rift-normal compression relative to the regional horizontal stress difference, which controls the amount of stress rotation, also determines whether the superposed stress increases or decreases the local maximum horizontal shear stress. The potential for fault reactivation of ancient continental rifts in general is analyzed considering both the local stress rotation and modification of horizontal shear stress for both thrust and strike-slip stress regimes. In the Amazonas

  7. The Large-Scale Biosphere-Atmosphere Experiment in Amazonia: Analyzing Regional Land Use Change Effects.

    Treesearch

    Michael Keller; Maria Assunção Silva-Dias; Daniel C. Nepstad; Meinrat O. Andreae

    2004-01-01

    The Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA) is a multi-disciplinary, multinational scientific project led by Brazil. LBA researchers seek to understand Amazonia in its global context especially with regard to regional and global climate. Current development activities in Amazonia including deforestation, logging, cattle ranching, and agriculture...

  8. Fine litter input to terrestrial humus forms in Colombian Amazonia.

    PubMed

    Lips, Johanna M; Duivenvoorden, Joost F

    1996-10-01

    A comparative litter fall study was made in five rain forest stands along a gradient of humus form development and soils in the Amazon lowlands of eastern Colombia. The total fine litter fall was highest in a plot on a well drained soil of the flood plain of the Caquetá River (1.07 kg · m(-2) · y(-1)), lower in three plots on well drained upland soils (0.86, 0.69, and 0.68 kg · m(-2) · y(-1)), and lowest in a plot on a poorly drained, upland podzolised soil (0.62 kg · m(-2) · y(-1)). In the four upland plots, leaf litter fall patterns were highly associated, which points at climatic regulation. Litter resource quality, as represented by nutrient concentrations and area/weight ratio of the leaf litter fall, was comparatively high in the flood plain plot. In the upland plots, concentrations and fluxes of Ca, Mg, K, and P were as low as in oligotrophic central Amazonian upland forests. This questions generalisations that the western peripheral region of the Amazon basin should be less oligotrophic than central Amazonia. The upland plot on the podzolised soil showed the lowest concentrations and fluxes of N. Mean residence times of organic matter and nutrients in the L horizons hardly differed between the five plots, suggesting that edaphic properties and litter resource quality are of little importance in the first step of decomposition. Mean residence time of organic matter in all ectorganic horizons combined (estimated on the basis of litter input and necromass on the forest floor, and uncorrected for dead fine root input) varied from 1.0 y in the flood plain forest, 1.1-3.3 y in the well drained upland forests, and 10.2 y in the forest on the podzolised soil.

  9. Regional distribution of large blowdown patches across Amazonia in 2005 caused by a single convective squall line

    NASA Astrophysics Data System (ADS)

    Araujo, Raquel Fernandes; Nelson, Bruce Walker; Celes, Carlos Henrique Souza; Chambers, Jeffrey Q.

    2017-08-01

    In mid-January 2005 a convective squall line traversed 4.5 × 106 km2 of Amazonia from southwest to northeast. As seen in Landsat images, this atypical convective storm left blowdown imprints with diffuse geometry, unlike the fan-shaped wind disturbance of much more frequent east-to-west propagating squall lines. Previous work reported 0.2% of the forest area damaged by this one relatively rare event within one Landsat image and assumed similar disturbance across the entire traverse. We mapped convective wind damage impact to the region in 2005 by identifying large-scale (>4 ha) blowdown imprints in 30 Landsat images. The diffuse-type imprints associated with this single squall line contributed up to 60-72% of total 2005 wind-disturbed area detected across the region, but damage was highly concentrated in central Amazonia. Consequently, the distribution of large wind damage patches in 2005 across Amazonia was very different from long-term average. Regional distribution of wind-driven tree mortality for smaller patch sizes remains unknown.

  10. Factors Controlling Liquid Particulate Matter in Amazonia

    NASA Astrophysics Data System (ADS)

    Bateman, A. P.; Gong, Z.; de Sá, S. S.; Wernis, R. A.; Yee, L.; Isaacman-VanWertz, G. A.; Goldstein, A. H.; Castillo, P.; Sedlacek, A. J., III; Palm, B. B.; Campuzano-Jost, P.; Day, D. A.; Hu, W.; Jimenez, J. L.; Alexander, L.; Manzi, A. O.; Souza, R. A. F. D.; Artaxo, P.; Martin, S. T.

    2015-12-01

    The hygroscopic response of particulate matter (PM) during GoAmazon 2014/5 was investigated through the use of particle rebound (or lack thereof) during impaction. The hygroscopic response was measured online and in real-time using a custom designed impaction apparatus. The impaction apparatus was calibrated with respect to particle viscosity indicating a liquid state (viscosity <102 Pa s) for complete adherence (no particle rebound). By varying the PM water content and observing particle rebound as a function of RH (up to 98%), the hygroscopic response and phase state of the PM under investigation was determined. The hygroscopic response curves were categorized according to the rebound fraction at high RH (80 - 98%) bounded by two extremes. 1) Time periods that resemble pure SOM generated under controlled chamber conditions, where no particle rebound is observed above 80% RH. 2) Time periods that a large fraction (10 - 40%) of particles rebound at RH values >95%, an indication of hydrophobic particles. The role of anthropogenic and biogenic factors in controlling the hygroscopic response of PM in Amazonia is investigated through meteorological conditions and particle chemical composition.

  11. Catalogue of distribution of lizards (Reptilia: Squamata) from the Brazilian Amazonia. IV. Alopoglossidae, Gymnophthalmidae.

    PubMed

    Ribeiro-Júnior, Marco A; Amaral, Silvana

    2017-05-22

    We present distribution data of all Alopoglossidae and Gymnophthalmidae lizards known from the Brazilian Amazonia, totaling 54 species-level taxa, belonging to 17 genera and two families. This represents 22 more species-level taxa than previously reported. Data were based on 17,431 specimens deposited in three North American and eight Brazilian museums, including the main collections harboring Amazonian material. Most species (~80%) are endemic to Amazonia; non-endemic species are mainly associated with open vegetation (savanna) enclaves or open dry (semideciduous) forest in Amazonia, with a few exceptions. As a whole, seven taxa (including one species complex) are widespread in Amazonia, six are restricted to eastern Amazonia, seven to western Amazonia, two to southwestern Amazonia, 11 to southern Amazonia, 11 to northern Amazonia (either in part of it or widespread in the Guiana region), and six to the southern peripheral portion of Amazonia. Besides, four species present unique distributions. Considering this study and the other three catalogues of distribution of lizards already published, the total number of lizard species from Brazilian Amazonia increased from 97 to 142 species-level tava. It represents an increase of 45 species from the region since the last revision.

  12. Dynamics, patterns and causes of fires in Northwestern Amazonia.

    PubMed

    Armenteras, Dolors; Retana, Javier

    2012-01-01

    According to recent studies, two widespread droughts occurred in the Amazon basin, one during 2005 and one during 2010. The drought increased the prevalence of climate-driven fires over most of the basin. Given the importance of human-atmosphere-vegetation interactions in tropical rainforests, these events have generated concerns over the vulnerability of this area to climate change. This paper focuses on one of the wettest areas of the basin, Northwestern Amazonia, where the interactions between the climate and fires are much weaker and where little is known about the anthropogenic drivers of fires. We have assessed the response of fires to climate over a ten-year period, and analysed the socio-economic and demographic determinants of fire occurrence. The patterns of fires and climate and their linkages in Northwestern Amazonia differ from the enhanced fire response to climate variation observed in the rest of Amazonia. The highest number of recorded fires in Northwestern Amazonia occurred in 2004 and 2007, and this did not coincide with the periods of extreme drought experienced in Amazonia in 2005 and 2010. Rather, during those years, Northwestern Amazonia experienced a relatively small numbers of fire hotspots. We have shown that fire occurrence correlated well with deforestation and was determined by anthropogenic drivers, mainly small-scale agriculture, cattle ranching (i.e., pastures) and active agricultural frontiers (including illegal crops). Thus, the particular climatic conditions for air convergence and rainfall created by proximity to the Andes, coupled with the presence of one of the most active colonisation fronts in the region, make this region differently affected by the general drought-induced fire patterns experienced by the rest of the Amazon. Moreover, the results suggest that, even in this wet region, humans are able to modify the frequency of fires and impact these historically well preserved forests.

  13. Dynamics, Patterns and Causes of Fires in Northwestern Amazonia

    PubMed Central

    Armenteras, Dolors; Retana, Javier

    2012-01-01

    According to recent studies, two widespread droughts occurred in the Amazon basin, one during 2005 and one during 2010. The drought increased the prevalence of climate-driven fires over most of the basin. Given the importance of human-atmosphere-vegetation interactions in tropical rainforests, these events have generated concerns over the vulnerability of this area to climate change. This paper focuses on one of the wettest areas of the basin, Northwestern Amazonia, where the interactions between the climate and fires are much weaker and where little is known about the anthropogenic drivers of fires. We have assessed the response of fires to climate over a ten-year period, and analysed the socio-economic and demographic determinants of fire occurrence. The patterns of fires and climate and their linkages in Northwestern Amazonia differ from the enhanced fire response to climate variation observed in the rest of Amazonia. The highest number of recorded fires in Northwestern Amazonia occurred in 2004 and 2007, and this did not coincide with the periods of extreme drought experienced in Amazonia in 2005 and 2010. Rather, during those years, Northwestern Amazonia experienced a relatively small numbers of fire hotspots. We have shown that fire occurrence correlated well with deforestation and was determined by anthropogenic drivers, mainly small-scale agriculture, cattle ranching (i.e., pastures) and active agricultural frontiers (including illegal crops). Thus, the particular climatic conditions for air convergence and rainfall created by proximity to the Andes, coupled with the presence of one of the most active colonisation fronts in the region, make this region differently affected by the general drought-induced fire patterns experienced by the rest of the Amazon. Moreover, the results suggest that, even in this wet region, humans are able to modify the frequency of fires and impact these historically well preserved forests. PMID:22523580

  14. The phylogeography of Amazonia revisited: new evidence from riodinid butterflies.

    PubMed

    Hall, Jason P W; Harvey, Donald J

    2002-07-01

    A fully resolved cladogram for 19 species in the Charis cleonus group of riodinid butterflies, which have closely parapatric ranges throughout the Amazon basin, is used to derive an area cladogram for the region. This represents the first comprehensive species-level analysis using insects and results in a hypothesis of Amazonian area relationships that is the most detailed to date. The Charis area cladogram is interpreted as supporting an historical vicariant split between the Guianas and the remainder of the Amazon and then between the upper and lower Amazon. The latter two clades can be further divided into the six most widely recognized areas of endemism and even smaller endemic centers within these, some of which, especially along the Madeira and lower Amazon Rivers, have never been previously hypothesized for butterflies. The overall pattern of historical interrelationships indicated is Guiana + ((Rondĵnia + (Pará + Belém)) + (Imeri + (Napo + Inambari))). The area relationships for riodinid butterflies show substantial congruence with those presented from the literature for amphibians, reptiles, birds, primates, rodents, and marsupials, suggesting a common vicariant history for these organisms. A summary area cladogram generated by combining area cladograms for all the aforementioned groups of organisms indicated the pattern of historical interrelationships to be (Guiana + (Rondĵnia + (Pará + Belém))) + (Imeri + (Napo + Inambari)). Charis cleonus group species distributions are noticeably larger around the upland periphery of Amazonia and smaller in the central and lower regions. A significant positive correlation between the proportion of range area above 100 m and total range size for each species is used to suggest that past sea-level rises may explain smaller range sizes in low-lying regions and that riverine barriers have been important in shaping the current distribution of C. cleonus group species.

  15. The mitogenome of Onchocerca volvulus from the Brazilian Amazonia focus

    PubMed Central

    Crainey, James L; da Silva, Túllio RR; Encinas, Fernando; Marín, Michel A; Vicente, Ana Carolina P; Luz, Sérgio LB

    2016-01-01

    We report here the first complete mitochondria genome of Onchocerca volvulus from a focus outside of Africa. An O. volvulus mitogenome from the Brazilian Amazonia focus was obtained using a combination of high-throughput and Sanger sequencing technologies. Comparisons made between this mitochondrial genome and publicly available mitochondrial sequences identified 46 variant nucleotide positions and suggested that our Brazilian mitogenome is more closely related to Cameroon-origin mitochondria than West African-origin mitochondria. As well as providing insights into the origins of Latin American onchocerciasis, the Brazilian Amazonia focus mitogenome may also have value as an epidemiological resource. PMID:26814648

  16. The mitogenome of Onchocerca volvulus from the Brazilian Amazonia focus.

    PubMed

    Crainey, James L; Silva, Túllio R R da; Encinas, Fernando; Marín, Michel A; Vicente, Ana Carolina P; Luz, Sérgio L B

    2016-01-01

    We report here the first complete mitochondria genome of Onchocerca volvulus from a focus outside of Africa. An O. volvulus mitogenome from the Brazilian Amazonia focus was obtained using a combination of high-throughput and Sanger sequencing technologies. Comparisons made between this mitochondrial genome and publicly available mitochondrial sequences identified 46 variant nucleotide positions and suggested that our Brazilian mitogenome is more closely related to Cameroon-origin mitochondria than West African-origin mitochondria. As well as providing insights into the origins of Latin American onchocerciasis, the Brazilian Amazonia focus mitogenome may also have value as an epidemiological resource.

  17. Osteoma in a blue-fronted Amazon parrot (Amazona aestiva).

    PubMed

    Cardoso, João Felipe Rito; Levy, Marcelo Guilherme Bezerra; Liparisi, Flavia; Romão, Mario Antonio Pinto

    2013-09-01

    Osteoma is an uncommon bone formation documented in avian species and other animals. A blue-fronted Amazon parrot (Amazona aestiva) with clinical respiratory symptoms was examined because of a hard mass present on the left nostril. Radiographs suggested a bone tumor, and the mass was surgically excised. Histopathologic examination revealed features of an osteoma. To our knowledge, this is the first description of an osteoma in a blue-fronted Amazon parrot. Osteoma should be considered as a differential diagnosis in birds with respiratory distress and swelling of the nostril.

  18. Cloacolith in a blue-fronted amazon parrot (Amazona aestiva).

    PubMed

    Beaufrère, Hugues; Nevarez, Javier; Tully, Thomas N

    2010-06-01

    A 4-year-old blue-fronted Amazon parrot (Amazona aestiva) was admitted for vocalization secondary to constipation. Saline infusion cloacoscopy revealed the presence of a 2-cm-diameter cloacolith within the coprodeum that was obstructing the rectal opening. The cloacolith was fragmented with a pair of biopsy forceps and the pieces removed. The cloacolith was subsequently analyzed and was composed of 100% uric acid salts. The bird improved completely and was able to defecate normally after the procedure. Cloacoliths are relative uncommon cloacal conditions, and this case documents cloacoscopic findings, rectal obstruction, and confirmation of its uric acid composition by urolith analysis.

  19. Avifauna of the Pongos Basin, Amazonas Department, Peru

    USGS Publications Warehouse

    Brooks, Daniel M.; O'Neill, John P.; Foster, Mercedes S.; Mark, Todd; Dauphine, Nico; Franke, Irma J.

    2009-01-01

    We provide an inventory of the avifauna of the Pongos Basin, northern Amazonas Department, Peru based on museum specimens collected during expeditions spanning >60 years within the 20th century. Four hundred and thirty-eight species representing 52 families are reported. Differences between lowland and higher elevation avifaunas were apparent. Species accounts with overviews of specimen data are provided for four species representing distributional records, two threatened species, and 26 species of Nearctic and Austral migrants, of which six are considered probable migrants.

  20. Miconia papillosperma (Melastomataceae, Miconieae): a new species from Amazonas, Brazil

    PubMed Central

    Michelangeli, Fabián A.; Goldenberg, Renato

    2016-01-01

    Abstract Miconia papillosperma, a new species of Melastomataceae shrubs from Northern Brazil is described and illustrated. This new species is characterized by elliptic lanceolate leaves with the only pair of secondary veins running close to the margin. It is also unique in having seeds with a papillose testa, a character until now unknown in the Miconieae. The description of this new species from a relatively well collected area near a major road north of Manaus, Amazonas, Brazil, is further evidence of our lack of knowledge on plants in many Neotropical areas. PMID:27489476

  1. Genome empowerment for the Puerto Rican parrot – Amazona vittata

    PubMed Central

    2012-01-01

    A unique community-funded project in Puerto Rico has launched whole-genome sequencing of the critically endangered Puerto Rican Parrot (Amazona vittata), with interpretation by genome bioinformaticians and students, and deposition into public online databases. This is the first article that focuses on the whole genome of a parrot species, one endemic to the USA and recently threatened with extinction. It provides invaluable conservation tools and a vivid example of hopeful prospects for future genome assessment of so many new species. It also demonstrates inventive ways for smaller institutions to contribute to a field largely considered the domain of large sequencing centers. PMID:23587407

  2. Miconia papillosperma (Melastomataceae, Miconieae): a new species from Amazonas, Brazil.

    PubMed

    Michelangeli, Fabián A; Goldenberg, Renato

    2016-01-01

    Miconia papillosperma, a new species of Melastomataceae shrubs from Northern Brazil is described and illustrated. This new species is characterized by elliptic lanceolate leaves with the only pair of secondary veins running close to the margin. It is also unique in having seeds with a papillose testa, a character until now unknown in the Miconieae. The description of this new species from a relatively well collected area near a major road north of Manaus, Amazonas, Brazil, is further evidence of our lack of knowledge on plants in many Neotropical areas.

  3. Hypotheses to explain the origin of species in Amazonia.

    PubMed

    Haffer, J

    2008-11-01

    The main hypotheses proposed to explain barrier formation separating populations and causing the differentiation of species in Amazonia during the course of geological history are based on different factors, as follow: (1) Changes in the distribution of land and sea or in the landscape due to tectonic movements or sea level fluctuations (Paleogeography hypothesis), (2) the barrier effect of Amazonian rivers (River hypothesis), (3) a combination of the barrier effect of broad rivers and vegetational changes in northern and southern Amazonia (River-refuge hypothesis), (4) the isolation of humid rainforest blocks near areas of surface relief in the periphery of Amazonia separated by dry forests, savannas and other intermediate vegetation types during dry climatic periods of the Tertiary and Quaternary (Refuge hypothesis), (5) changes in canopy-density due to climatic reversals (Canopy-density hypothesis) (6) the isolation and speciation of animal populations in small montane habitat pockets around Amazonia due to climatic fluctuations without major vegetational changes (Museum hypothesis), (7) competitive species interactions and local species isolations in peripheral regions of Amazonia due to invasion and counterinvasion during cold/warm periods of the Pleistocene (Disturbance-vicariance hypothesis) and (8) parapatric speciation across steep environmental gradients without separation of the respective populations (Gradient hypothesis). Several of these hypotheses probably are relevant to a different degree for the speciation processes in different faunal groups or during different geological periods. The basic paleogeography model refers mainly to faunal differentiation during the Tertiary and in combination with the Refuge hypothesis. Milankovitch cycles leading to global main hypotheses proposed to explain barrier formation separating populations and causing the differentiation of species in Amazonia during the course of geological history are based on different

  4. Selective Logging, Fire, and Biomass in Amazonia

    NASA Technical Reports Server (NTRS)

    Houghton, R. A.

    1999-01-01

    Biomass and rates of disturbance are major factors in determining the net flux of carbon between terrestrial ecosystems and the atmosphere, and neither of them is well known for most of the earth's surface. Satellite data over large areas are beginning to be used systematically to measure rates of two of the most important types of disturbance, deforestation and reforestation, but these are not the only types of disturbance that affect carbon storage. Other examples include selective logging and fire. In northern mid-latitude forests, logging and subsequent regrowth of forests have, in recent decades, contributed more to the net flux of carbon between terrestrial ecosystems and the atmosphere than any other type of land use. In the tropics logging is also becoming increasingly important. According to the FAO/UNEP assessment of tropical forests, about 25% of total area of productive forests have been logged one or more times in the 60-80 years before 1980. The fraction must be considerably greater at present. Thus, deforestation by itself accounts for only a portion of the emissions carbon from land. Furthermore, as rates of deforestation become more accurately measured with satellites, uncertainty in biomass will become the major factor accounting for the remaining uncertainty in estimates of carbon flux. An approach is needed for determining the biomass of terrestrial ecosystems. 3 Selective logging is increasingly important in Amazonia, yet it has not been included in region-wide, satellite-based assessments of land-cover change, in part because it is not as striking as deforestation. Nevertheless, logging affects terrestrial carbon storage both directly and indirectly. Besides the losses of carbon directly associated with selective logging, logging also increases the likelihood of fire.

  5. A profile of scorpionism, including the species of scorpions involved, in the State of Amazonas, Brazil.

    PubMed

    Costa, Cícero Lucinaldo Soares de Oliveira; Fé, Nelson Ferreira; Sampaio, Iracilda; Tadei, Wanderli Pedro

    2016-01-01

    This study investigated scorpionism profile in the State of Amazonas, Brazil. Data referring to stinging incidents were obtained from the National Databank of Major Causes of Morbidity. Information on the scorpion species involved was obtained from the Amazonas State health units. Amazonas has a scorpionism rate of 8.14 cases/100,000 inhabitants. Some municipalities (e.g., Apuí) presented higher rates (273 cases/100,000 inhabitants). Most species involved in envenomation belonged to the genus Tityus. Our results reaffirm the notion of scorpionism being a public health hazard and provide data that can guide public policy aimed at scorpionism prevention and treatment.

  6. Catalogue of distribution of lizards (Reptilia: Squamata) from the Brazilian Amazonia. II. Gekkonidae, Phyllodactylidae, Sphaerodactylidae.

    PubMed

    Ribeiro-Júnior, Marco A

    2015-07-02

    I present distribution data of all geckos (Gekkonidae, Phyllodactylidae and Sphaerodactylidae) known from the Brazilian Amazonia, totaling 19 species, belonging to nine genera. This represents six more taxa than previously reported for these families. Data were based on the direct examination of 23,094 specimens deposited in three North American and eight Brazilian museums. Most species (68.4%) are endemic to the Amazonia; non-endemic species are mainly associated with open dry (semideciduous) forest or open vegetation (savanna) enclaves in Amazonia. As a whole, three taxa are widespread in Amazonia, two are restricted to eastern Amazonia, two to western Amazonia, three to northern Amazonia (either widespread or restriced to parts of the Guiana region), one to southern Amazonia, one to southwestern Amazonia, and three to the southern peripheral portion of Amazonia. Additionally, four species have unique distributions and four species have a distribution that is congruent with one of the areas of endemism recognized for other organisms (birds and primates), of which two occur in the area of endemism of Guiana, one in Inambari, and one in Tapajós.

  7. Catalogue of distribution of lizards (Reptilia: Squamata) from the Brazilian Amazonia. III. Anguidae, Scincidae, Teiidae.

    PubMed

    Ribeiro-Júnior, Marco A; Amaral, Silvana

    2016-12-09

    We present distribution data of all Anguidae, Scincidae, and Teiidae lizards known from the Brazilian Amazonia, totaling 29 species-level taxa, belonging to 14 genera. This represents 11 more species-level taxa than previously reported for these families in this area. Data were based on literature and 46,806 specimens deposited in three North American and eight Brazilian museums, including the main collections harboring Amazonian material. Most species (~55%) are endemic to Amazonia. Except for Ameiva ameiva, that is present in several environments and domains, non-endemic species are either associated with open dry (semideciduous) forest or open vegetation (savanna) enclaves in Amazonia, occupying similar environments outside Amazonia, gallery forests within the Cerrado, or present disjunct populations in the Atlantic Forest. As a whole, six taxa are widespread in Amazonia, four are restricted to eastern Amazonia, four to western Amazonia, three to southwestern Amazonia, one to northern Amazonia, and seven to the southern peripheral portion of Amazonia. Besides, two species present apparently more restricted, unique distributions. Only three species have a distribution that is congruent with one of the areas of endemism (AE) recognized for other organisms (birds and primates), of which two occur in AE Guiana and one in AE Inambari.

  8. Branchial cysts in two Amazon parrots (Amazona species).

    PubMed

    Beaufrère, Hugues; Castillo-Alcala, Fernanda; Holmberg, David L; Boston, Sarah; Smith, Dale A; Taylor, W Michael

    2010-03-01

    A 37-year-old yellow-crowned Amazon parrot (Amazona ochrocephala) and a 20-year-old red-lored Amazon parrot (Amazona autumnalis) each presented with a large mass localized on the lateral neck. With the first bird, there was no evidence of signs of pain or discomfort, and the bird prehended and swallowed food normally. The second bird showed signs of mild upper-gastrointestinal discomfort. Results of an ultrasound examination and aspiration of the mass on each bird revealed a cystic structure. A computed tomography performed on the second bird revealed a large polycystic mass connected to the pharynx by a lateral tract. During surgical resection, both masses were found to originate from the subpharyngeal area. Based on topography and the histopathologic and immunohistochemical results, the masses were determined to be a second branchial cleft cyst for the first case and a second branchial pouch cyst for the second case. In addition, a carcinoma was present in situ within the epithelium of case 1, and the cyst in case 2 was secondarily infected. Branchial cysts are uncommonly diagnosed in veterinary and human medicine. These 2 cases are the first documented in parrots and appear similar to second branchial cysts reported in adult humans.

  9. Were Amazonia and Baltica Connected in Nuna and Rodinia?

    NASA Astrophysics Data System (ADS)

    Bogdanova, S. V.; Pisarevsky, S. A.

    2015-12-01

    Most of paleogeographic reconstructions of Proterozoic supercontinents Rodinia and Nuna consider a long-lived connection between Baltica and Amazonia/West Africa between 1.8 and 1.0 Ga. This connection implies a common Paleo-to-Mesoproterozoic accretionary margin of south-western Baltica and Amazonia. We tested the validity of this hypothesis by the time-space analysis of the crustal growth of major tectonic domains in these cratons and their possible relationships. We analysed a subduction polarity, gaps in juvenile crustal growth, "stitching" magmatism and sedimentary basins as well as SLIP and LIP events. In doing so, we found several mismatches between respective domains of these cratons: (a) their chronologies and "barcodes" of magmatism are mostly non-correlative; (b) their subduction directions were different, e. g. at 2.0-1.90, 1.80-1.75, and 1.0 Ga; (c) accretionary crustal growth of Baltica was semi-continuous during 500 m. y. (2.0 to1.5 Ga), while in Amazonia production of juvenile crust occurred in relatively short, 100-200 m.y. periods (2.0-1.9 and 1.55-1.35 Ga) with 100-150 m. y. gaps; (d) subduction stopped in Baltica between 1.45 and 1.2 Ga but continued in Amazonia at the same time; (e) some parts of Amazonian provinces could be incorporated microcontinents like Rio Negro(?) and Paragua; (f) Baltica escaped the 1.89-1.87 Ga SLIP and 1.8-1.75 Ga LIP events, which broadly disturbed Amazonia. Several apparently coeval periods of crustal growth and tectonism in Amazonia and Baltica (1.8-1.75, 1.59-1.52, 1.50-1.40, 1.1-0.95Ga) we interpret as indicators of global plate reorganization and continent rotations. Careful analysis of available Mesoproterozoic paleomagnetic data from Baltica and Amazonia also does not support a long-lived integrity of these cratons.

  10. The Frequency and Fate of Understory Forest Fires in Amazonia

    NASA Astrophysics Data System (ADS)

    Morton, D. C.; le page, Y.; Wang, D.; Chen, Y.; Randerson, J. T.; Collatz, G. J.; Giglio, L.; Hurtt, G. C.; DeFries, R. S.

    2012-12-01

    Fires for deforestation or agricultural management frequently escape their intended boundaries and burn standing Amazon forests. The extent and frequency of understory forest fires are critical to assess forest carbon emissions and the long-term legacy of understory fires in Amazonia. Patterns of understory fire activity under current climate conditions also offer a blueprint for potential changes in Amazon forests under scenarios of future climate and land use. Here, we estimated of the extent and frequency of understory forest fires for the entire arc of deforestation in southern Amazonia using a time series of annual Moderate Resolution Imaging Spectroradiometer (MODIS) data. Understory forest fires burned more than 80,000 km2 during 1999-2010. Fires were widespread along the southern and eastern extents of Amazon forests during the four years with highest fire activity (1999, 2005, 2007, 2010). The interannual variability in understory fires offered new insights into fire-climate dynamics in Amazonia over a range of temporal scales, based on the combination of burned area, MODIS active fire detections, and reanalysis climate data. Initial fire exposure reduces aboveground carbon stocks, and frequent fires are one possible mechanism for long-term changes the structure of Amazon forests. Repeated burning was concentrated in southeastern Amazonia, and >95% of all repeated fires occurred in the Brazilian states of Mato Grosso and Pará. Forests that burned two or more times during this period accounted for 16% of understory fire activity. Finally, deforestation of burned forests was rare, suggesting that forest degradation from understory fires was an independent source of carbon emissions during this period. Modeling the time scales of carbon loss and recovery in burned forests is therefore critical to estimate the net carbon emissions from these fires. The results of this study suggest that understory fires operate as a large-scale edge effect in Amazonia, as

  11. [Nature and civilization: the decorative panels of the Teatro Amazonas foyer].

    PubMed

    Daou, Ana Maria Lima

    2007-12-01

    The decorative panels in the foyer of the Teatro Amazonas, inaugurated in 1896, stand out from the rest of the building's ornamental iconography. The rubber trade brought great wealth to the capitals of Pará and Amazonas and as these cities gained national and international fame, their urban fabric and forms of sociability underwent significant changes. The article looks for parallels between the landscape representations of Amazonian nature adorning the building's foyer, the construction of the modern city, and social uses of the Teatro Amazonas, symbol of the era and emblem of the newly rich elite, who were then taking their place on the regional and national stages. The Teatro Amazonas formed the center of the era's social life and its foyer played host to veritable rituals of 'civilization', in which Brazilian and foreign guests enjoyed the fine setting of Amazon's nature as represented in the decorative wall panels.

  12. Is deforestation driving Southeastern Amazonia's hydrological transition?

    NASA Astrophysics Data System (ADS)

    Arias, M. E.; Lee, E.; Farinosi, F.; Moorcroft, P. R.; Pereira, F. F.

    2015-12-01

    Changes in forest cover are critical for the maintenance of the hydrological cycle in tropical forests and surrounding landscapes. Most evidence suggesting impacts of deforestation on river flows comes from local scale and short duration experiments, but these are largely prohibited in vast and inaccessible areas of the Amazon. Although rainfall-runoff models are commonly used to scale up deforestation effects to regional scales and multidecadal time ranges, most of these models assume static land use/land cover, excluding temporal variability in human disturbance in decadal long simulations. This presentation will present a study carried out in the Tapajos River in Brazil, a large basin in southeast Amazonia, where we aim to understand the role of human disturbance and vegetation dynamics on river flows. This study analyzed spatial and temporal trends in observed rainfall, forest cover, and river flow indicators for 1970s to 2000s. During this period, no significant changes occur in total annual rainfall, while over 140,000 km2 (35% of original cover) of forest were cleared. Contrary to the expected response following deforestation, 90-day minimum river flows showed a significant decrease though most gauges in the basin. In order to isolate deforestation effects, two contrasting scenarios were computed at a daily scale using the Ecosystem Demography Model 2 in combination with a water flow routing scheme; the first scenario incorporated natural disturbance resembling 1970 forest conditions, while the second scenario incorporated both natural and human disturbance (aka., land use conversion), the later as observed annually from the 1970s to the 2000s. We estimated that deforestation began affecting dry season flows in the early 1990s once less than 10% of the original forest cover was lost. Also, a potential effect of deforestation on the timing of rainfall-flow responses was also detected in the lower river gauges. While the estimated effects on timing are also

  13. First captive breeding of the imperial parrot (Amazona imperialis).

    PubMed

    Reillo, Paul R; Durand, Stephen; Burton, Minchinton

    2011-01-01

    We describe the rearing and development of the first imperial parrot (Amazona imperialis) hatched and raised in captivity. A single egg was hen-incubated for 28 days, and the chick was parent-fed for ∼14 days, after which it was removed for hand-rearing. Similar to wild, parent-reared imperial nestlings, the chick developed fully within 12 weeks, weaning at 540 g body weight. Endangered and endemic to Dominica, the imperial is a vital flagship for oceanic rainforest conservation. Chronicling the neonatal development of A. imperialis helps illuminate the natural history of this enigmatic species, whose secretive nesting habits and low population density have frustrated a detailed understanding of its ecology and reproduction. © 2010 Wiley-Liss, Inc.

  14. A colored leg banding technique for Amazona parrots

    USGS Publications Warehouse

    Meyers, J.M.

    1995-01-01

    A technique for individual identification of Amazona was developed using plastic leg bands. Bands were made from 5- and 7-mm-wide strips of laminated PVC coiled 2.5 times with an inside diameter 4-5 mm gt the maximum diameter of the parrot's leg. Seventeen parrots were captured in Puerto Rico, marked with individual plastic leg bands, and observed for 204-658 d with only one lost or damaged plastic band. Plastic leg bands did not cause injury to or calluses on parrots' legs. The plastic material used for making leg bands was available in 18 colors in 1994, which would allow unique marking of 306 individuals using one plastic leg band on each leg.

  15. Lipid Panel Reference Intervals for Amazon Parrots (Amazona species).

    PubMed

    Ravich, Michelle; Cray, Carolyn; Hess, Laurie; Arheart, Kristopher L

    2014-09-01

    The lipoprotein panel is a useful diagnostic tool that allows clinicians to evaluate blood lipoprotein fractions. It is a standard diagnostic test in human medicine but is poorly understood in avian medicine. Amazon parrots (Amazona species) are popular pets that frequently lead a sedentary lifestyle and are customarily fed high-fat diets. Similar to people with comparable diets and lifestyles, Amazon parrots are prone to obesity and atherosclerosis. In human medicine, these conditions are typically correlated with abnormalities in the lipoprotein panel. To establish reference intervals for the lipoprotein panel in Amazon parrots, plasma samples from 31 captive Amazon parrots were analyzed for concentrations of cholesterol, triglycerides, high-density lipoprotein (HDL), low-density lipoprotein (LDL), and very low-density lipoprotein (VLDL). The data were also grouped according to sex, diet, body condition score, and age. Aside from HDL levels, which were significantly different between male and female parrots, no intergroup differences were found for any of the lipoprotein fractions.

  16. [Pattern of HIV/AIDS infection in Manaus, State of Amazonas, between 1986 and 2000].

    PubMed

    Silva, Leila Cristina Ferreira da; Santos, Elizabeth Moreira dos; Silva Neto, Antonio Levino da; Miranda, Angélica Espinosa; Talhari, Sinésio; Toledo, Luciano de Medeiros

    2009-01-01

    The objective of this study was to describe HIV infection in Manaus, Amazonas, between 1986 and 2000. This was a descriptive study on confirmed cases of HIV/AIDS among adults, from the medical records of the State Reference Service. To delineate the spatial epidemiological profile and historical trends, the following periods were considered: 1986-1990, 1991-1995 and 1996-2000. The behavioral, social and clinical variables were analyzed by means of descriptive statistics. The spatial trends and patterns and the incidence rates were presented according to residential district using thematic maps. Among the 1,400 cases studied, the mortality rate decreased from 61.3% to 17.8% and the gender ratio (four men/one woman) decreased over the study period. The main exposure route was sexual: bisexual (31%) and heterosexual (19.3%). There was a high rate of late diagnosis, made during the symptomatic phase of AIDS (50.8%). This study showed that HIV/AIDS infection in Manaus has spread slowly and progressively from the central area of the city towards the south, north, east and west.

  17. Granulomatous encephalomyelitis and intestinal ganglionitis in a spectacled Amazon parrot (Amazona albifrons) infected with Mycobacterium genavense.

    PubMed

    Gomez, G; Saggese, M D; Weeks, B R; Hoppes, S M; Porter, B F

    2011-01-01

    An approximately 30-year-old male spectacled Amazon parrot (Amazona albifrons) was presented with a 2-week history of ataxia, head shaking, weight loss and seizures. Gross findings on necropsy examination included atrophy of the musculature, ruffled feathers and minimal epicardial and abdominal fat. Microscopically, there were perivascular cuffs of macrophages with fewer lymphocytes in the grey and white matter of the brain and spinal cord. These lesions were accompanied by gliosis and mild vacuolation of the white matter. In the small intestine, up to 70% of the intestinal ganglia were effaced by infiltrates of macrophages and fewer lymphocytes. The intestinal lamina propria contained multiple inflammatory aggregates of a similar nature. Ziehl-Neelsen staining revealed the presence of numerous bacilli within the cytoplasm of macrophages in the central nervous system (CNS) and enteric ganglia. Amplification of the DNAJ gene confirmed a mycobacterial infection and subsequent polymerase chain reaction (PCR) using a species-specific primer confirmed the aetiology as Mycobacterium genavense. Infection of the CNS with Mycobacterium spp. is uncommon and has not been previously reported in a parrot. This case is unusual in that the organism exhibited tropism for neural tissue.

  18. The logic of livestock and deforestation in Amazonia

    SciTech Connect

    Hecht, S.B. )

    1993-11-01

    Most cleared forest in Latin America's lowland tropics will eventually become pasture. The incineration of large areas of high-biomass forest in Amazonia currently generates 10-15% of the total carbon additions to the atmosphere. This article analyzes the logic and economics of livestock in Amazonia by evaluating the various means of making profits from land and natural-resource capital. It also discusses how the Amazonian livestock sector is closely linked to virtually every other rural development activity. These links establish a framework for analyzing deforestation patterns. The analysis qualifies some of the current explanations of deforestation. Finally, current approaches to diminishing this destructive land use are discussed. 51 refs., 1 fig., 3 tabs.

  19. Navigating Amazonia under uncertainty: past, present and future environmental governance.

    PubMed

    Boyd, Emily

    2008-05-27

    One of the major environmental challenges of the twenty-first century is the continued rapid deforestation of Amazonia. The 2005 dieback crisis emphasizes the unprecedented challenges facing Brazil. The examination of past and present institutions for ecosystem management, in Amazonia, shows structural barriers across public, private and community arrangements. The adaptive governance concept helps to understand why these institutions are failing to deliver sustainable futures. In looking forward, it is encouraging to see that important networks of knowledge and a number of novel initiatives are emerging in Brazil. These new arrangements are novel in the way that they seem to be adaptive and navigate structures in the hope of overcoming insurmountable drivers of deforestation.

  20. Catalogue of distribution of lizards (Reptilia: Squamata) from the Brazilian Amazonia. I. Dactyloidae, Hoplocercidae, Iguanidae, Leiosauridae, Polychrotidae, Tropiduridae.

    PubMed

    Ribeiro-Júnior, Marco A

    2015-07-08

    I present distribution data of all Dactyloidae, Hoplocercidae, Iguanidae, Leiosauridae, Polychrotidae and Tropiduridae lizards known from the Brazilian Amazonia, totaling 40 species-level taxa, belonging to 11 genera. This represents four more species-level taxa than previously reported for these families. Data were based on the direct examination of 41,243 specimens deposited in three North American and eight Brazilian musea, including the main collections harboring Amazonian material. Most species (62.5%) are endemic to the Amazonia; non-endemic species are mainly associated with open dry (semideciduous) forest or open vegetation (savanna) enclaves in Amazonia, with a few exceptions. As a whole, seven taxa are widespread in Amazonia, one is restricted to eastern Amazonia, three to western Amazonia, five to northern Amazonia (either in part of it or widespread in the Guiana region), two to northwestern Amazonia, one to southern Amazonia, nine to southwestern Amazonia, and seven to the southern peripheral portion of Amazonia. Five species have unique distributions and five species have a distribution that is congruent with one of the areas of endemism (AE) recognized for other organisms (birds and primates). The first herpetological gazetteer for the Brazilian Amazonia with about 3,600 georeferenced localities was also produced.

  1. Widespread Forest Vertebrate Extinctions Induced by a Mega Hydroelectric Dam in Lowland Amazonia

    PubMed Central

    2015-01-01

    Mega hydropower projects in tropical forests pose a major emergent threat to terrestrial and freshwater biodiversity worldwide. Despite the unprecedented number of existing, under-construction and planned hydroelectric dams in lowland tropical forests, long-term effects on biodiversity have yet to be evaluated. We examine how medium and large-bodied assemblages of terrestrial and arboreal vertebrates (including 35 mammal, bird and tortoise species) responded to the drastic 26-year post-isolation history of archipelagic alteration in landscape structure and habitat quality in a major hydroelectric reservoir of Central Amazonia. The Balbina Hydroelectric Dam inundated 3,129 km2 of primary forests, simultaneously isolating 3,546 land-bridge islands. We conducted intensive biodiversity surveys at 37 of those islands and three adjacent continuous forests using a combination of four survey techniques, and detected strong forest habitat area effects in explaining patterns of vertebrate extinction. Beyond clear area effects, edge-mediated surface fire disturbance was the most important additional driver of species loss, particularly in islands smaller than 10 ha. Based on species-area models, we predict that only 0.7% of all islands now harbor a species-rich vertebrate assemblage consisting of ≥80% of all species. We highlight the colossal erosion in vertebrate diversity driven by a man-made dam and show that the biodiversity impacts of mega dams in lowland tropical forest regions have been severely overlooked. The geopolitical strategy to deploy many more large hydropower infrastructure projects in regions like lowland Amazonia should be urgently reassessed, and we strongly advise that long-term biodiversity impacts should be explicitly included in pre-approval environmental impact assessments. PMID:26132139

  2. The first species of the genus Caponina from Brazilian Amazonia (Araneae: Caponiidae).

    PubMed

    Brescovit, Antonio D; Ruiz, Alexander Sánchez

    2013-01-01

    The genus Caponina Simon, 1891 comprises eleven species of medium-sized, soil-dwelling caponiids. Most members of Caponina have six eyes, but some have five, four, three or two eyes (Brignoli 1977, Platnick 1994). The genus is widespread in South and Central America (Platnick 2012). To date, only three species have been recorded from Brazil: Caponina alegre Platnick, 1994 from the state of Rio Grande do Sul, C. notabilis (Mello-Leitão, 1939) from the states of Paraná and Rio Grande do Sul, and C. tijuca Platnick, 1994 from the state of Rio de Janeiro (Platnick 1994). In this paper we describe a new species from the state of Pará, in Brazilian Amazonia. Caponina papamanga new species was collected during the "Butantan na Amazonia" project, founded by the Instituto Butantan. The phylogenetic relationships of C. papamanga could not be studied, but the greatly elongated embolus, the dorsal tubercle on the palpal femur (Figs. 7, 9) and the massive epigynal sclerotizations (Fig. 10) suggest that this species belongs to the monophyletic Andean group proposed by Platnick (1994: 7). All morphological observations and illustrations were made using a Leica MZ12 stereomicroscope with camera lucida. The epigynum was dissected and immersed in clove oil for visualization of internal structures following Levi (1965). Descriptions and measurements follow Platnick (1994). Measurements are given in millimeters. Scanning electron microscope (SEM) images were taken using a Jeol-JSM-5200 with attached SLR digital camera. The material examined was deposited in the collections of the Instituto Butantan, Sgo Paulo (IBSP, curator: D.M. Barros Battesti) and the Museu Paraense Emílio Goeldi, Belém (MPEG, curator: A.B. Bonaldo).

  3. Widespread Forest Vertebrate Extinctions Induced by a Mega Hydroelectric Dam in Lowland Amazonia.

    PubMed

    Benchimol, Maíra; Peres, Carlos A

    2015-01-01

    Mega hydropower projects in tropical forests pose a major emergent threat to terrestrial and freshwater biodiversity worldwide. Despite the unprecedented number of existing, under-construction and planned hydroelectric dams in lowland tropical forests, long-term effects on biodiversity have yet to be evaluated. We examine how medium and large-bodied assemblages of terrestrial and arboreal vertebrates (including 35 mammal, bird and tortoise species) responded to the drastic 26-year post-isolation history of archipelagic alteration in landscape structure and habitat quality in a major hydroelectric reservoir of Central Amazonia. The Balbina Hydroelectric Dam inundated 3,129 km2 of primary forests, simultaneously isolating 3,546 land-bridge islands. We conducted intensive biodiversity surveys at 37 of those islands and three adjacent continuous forests using a combination of four survey techniques, and detected strong forest habitat area effects in explaining patterns of vertebrate extinction. Beyond clear area effects, edge-mediated surface fire disturbance was the most important additional driver of species loss, particularly in islands smaller than 10 ha. Based on species-area models, we predict that only 0.7% of all islands now harbor a species-rich vertebrate assemblage consisting of ≥80% of all species. We highlight the colossal erosion in vertebrate diversity driven by a man-made dam and show that the biodiversity impacts of mega dams in lowland tropical forest regions have been severely overlooked. The geopolitical strategy to deploy many more large hydropower infrastructure projects in regions like lowland Amazonia should be urgently reassessed, and we strongly advise that long-term biodiversity impacts should be explicitly included in pre-approval environmental impact assessments.

  4. Phylogeny of Amazona barbadensis and the Yellow-Headed Amazon Complex (Aves: Psittacidae): A New Look at South American Parrot Evolution

    PubMed Central

    Strzała, Tomasz

    2014-01-01

    The Yellow-shouldered Amazon (Amazona barbadensis) is the sole parrot of the genus Amazona that inhabits only dry forests. Its population has been dropping; therefore it has been the topic of many studies and conservation efforts. However, the phylogenetic relationship of this species to potential relatives classified within the Yellow-Headed Amazon (YHA) complex are still not clear. Therefore, we used more extensive data sets, including the newly sequenced mitochondrial genome of A. barbadensis, to conduct phylogenetic analyses. Various combinations of genes and many phylogenetic approaches showed that A. barbadensis clustered significantly with A. ochrocephala ochrocephala from Colombia and Venezuela, which created the Northern South American (NSA) lineage, clearly separated from two other lineages within the YHA complex, the Central (CA) and South American (SA). Tree topology tests and exclusion of rapidly evolving sites provided support for a NSA+SA grouping. We propose an evolutionary scenario for the YHA complex and its colonization of the American mainland. The NSA lineage likely represents the most ancestral lineage, which derived from Lesser Antillean Amazons and colonized the northern coast of Venezuela about a million years ago. Then, Central America was colonized through the Isthmus of Panama, which led to the emergence of the CA lineage. The southward expansion to South America and the origin of the SA lineage happened almost simultaneously. However, more intensive or prolonged gene flow or migrations have led to much weaker geographic differentiation of genetic markers in the SA than in the CA lineage. PMID:24823658

  5. Phylogeny of Amazona barbadensis and the Yellow-headed Amazon complex (Aves: Psittacidae): a new look at South American parrot evolution.

    PubMed

    Urantówka, Adam Dawid; Mackiewicz, Paweł; Strzała, Tomasz

    2014-01-01

    The Yellow-shouldered Amazon (Amazona barbadensis) is the sole parrot of the genus Amazona that inhabits only dry forests. Its population has been dropping; therefore it has been the topic of many studies and conservation efforts. However, the phylogenetic relationship of this species to potential relatives classified within the Yellow-Headed Amazon (YHA) complex are still not clear. Therefore, we used more extensive data sets, including the newly sequenced mitochondrial genome of A. barbadensis, to conduct phylogenetic analyses. Various combinations of genes and many phylogenetic approaches showed that A. barbadensis clustered significantly with A. ochrocephala ochrocephala from Colombia and Venezuela, which created the Northern South American (NSA) lineage, clearly separated from two other lineages within the YHA complex, the Central (CA) and South American (SA). Tree topology tests and exclusion of rapidly evolving sites provided support for a NSA+SA grouping. We propose an evolutionary scenario for the YHA complex and its colonization of the American mainland. The NSA lineage likely represents the most ancestral lineage, which derived from Lesser Antillean Amazons and colonized the northern coast of Venezuela about a million years ago. Then, Central America was colonized through the Isthmus of Panama, which led to the emergence of the CA lineage. The southward expansion to South America and the origin of the SA lineage happened almost simultaneously. However, more intensive or prolonged gene flow or migrations have led to much weaker geographic differentiation of genetic markers in the SA than in the CA lineage.

  6. The Socioeconomic Factors and the Indigenous Component of Tuberculosis in Amazonas

    PubMed Central

    2016-01-01

    Despite the availability of tuberculosis prevention and control services throughout Amazonas, high rates of morbidity and mortality from tuberculosis remain in the region. Knowledge of the social determinants of tuberculosis in Amazonas is important for the establishment of public policies and the planning of effective preventive and control measures for the disease. To analyze the relationship of the spatial distribution of the incidence of tuberculosis in municipalities and regions of Amazonas to the socioeconomic factors and indigenous tuberculosis component, from 2007 to 2013. An ecological study was conducted based on secondary data from the epidemiological surveillance of tuberculosis. A linear regression model was used to analyze the relationship of the annual incidence of tuberculosis to the socioeconomic factors, performance indicators of health services, and indigenous tuberculosis component. The distribution of the incidence of tuberculosis in the municipalities of Amazonas was positively associated with the Gini index and the population attributable fraction of tuberculosis in the indigenous peoples, but negatively associated with the proportion of the poor and the unemployment rate. The spatial distribution of tuberculosis in the different regions of Amazonas was heterogeneous and closely related with the socioeconomic factors and indigenous component of tuberculosis. PMID:27362428

  7. Neogene and Quaternary history of vegetation, climate, and plant diversity in Amazonia

    NASA Astrophysics Data System (ADS)

    van der Hammen, Thomas; Hooghiemstra, Henry

    2000-04-01

    evaporation we estimate that LGM rainfall may have been reduced by values of ca. 45(±10%); Amazonian and Cordilleran lakes dried up; dry rain forest was locally replaced by savanna, savanna forest, or cerrado-type vegetation; dry rain forest, savanna forest, and pure savanna was locally replaced by extensive semi-desert dune formations (lower Rio Branco area in present-day central Amazonia). The present-day centers of higher rainfall (>2500 mm) surrounded by areas of lower rainfall, are refuge areas of the very wet rain forest and of the very high plant diversity (300 plant species per 0.1 ha), and they should have been that equally, or more, during the dry climate intervals (plant diversity of drier forests is in the order of 100-150 species per 0.1 ha). Both extinction and speciation in isolation under precipitation and temperature stress may have taken place in these refugia.

  8. Atmospheric aerosols in Amazonia and land use change: from natural biogenic to biomass burning conditions.

    PubMed

    Artaxo, Paulo; Rizzo, Luciana V; Brito, Joel F; Barbosa, Henrique M J; Arana, Andrea; Sena, Elisa T; Cirino, Glauber G; Bastos, Wanderlei; Martin, Scot T; Andreae, Meinrat O

    2013-01-01

    In the wet season, a large portion of the Amazon region constitutes one of the most pristine continental areas, with very low concentrations of atmospheric trace gases and aerosol particles. However, land use change modifies the biosphere-atmosphere interactions in such a way that key processes that maintain the functioning of Amazonia are substantially altered. This study presents a comparison between aerosol properties observed at a preserved forest site in Central Amazonia (TT34 North of Manaus) and at a heavily biomass burning impacted site in south-western Amazonia (PVH, close to Porto Velho). Amazonian aerosols were characterized in detail, including aerosol size distributions, aerosol light absorption and scattering, optical depth and aerosol inorganic and organic composition, among other properties. The central Amazonia site (TT34) showed low aerosol concentrations (PM2.5 of 1.3 +/- 0.7 microg m(-3) and 3.4 +/- 2.0 microg m(-3) in the wet and dry seasons, respectively), with a median particle number concentration of 220 cm(-3) in the wet season and 2200 cm(-3) in the dry season. At the impacted site (PVH), aerosol loadings were one order of magnitude higher (PM2.5 of 10.2 +/- 9.0 microg m(-3) and 33.0 +/- 36.0 microg m(-3) in the wet and dry seasons, respectively). The aerosol number concentration at the impacted site ranged from 680 cm(-3) in the wet season up to 20 000 cm(-3) in the dry season. An aerosol chemical speciation monitor (ACSM) was deployed in 2013 at both sites, and it shows that organic aerosol account to 81% to the non-refractory PM1 aerosol loading at TT34, while biomass burning aerosols at PVH shows a 93% content of organic particles. Three years of filter-based elemental composition measurements shows that sulphate at the impacted site decreases, on average, from 12% of PM2.5 mass during the wet season to 5% in the dry season. This result corroborates the ACSM finding that the biomass burning contributed overwhelmingly to the organic

  9. Multifragment alleles in DNA fingerprints of the parrot, Amazona ventralis

    USGS Publications Warehouse

    Brock, M.K.; White, B.N.

    1991-01-01

    Human DNA probes that identify variable numbers of tandem repeat loci are being used to generate DNA fingerprints in many animal and plant species. In most species the majority of the sc rable autoradiographic bands of the DNA fingerprint represent alleles from numerous unlinked loci. This study was initiated to use DNA fingerprints to determine the amount of band-sharing among captive Hispaniolan parrots (Amazona ventralis) with known genetic relationships. This would form the data base to examine DNA fingerprints of the closely related and endangered Puerto Rican parrot (A. vittata) and to estimate the degree of inbreeding in the relic population. We found by segregation analysis of the bands scored in the DNA fingerprints of the Hispaniolan parrots that there may be as few as two to five loci identified by the human 33.15 probe. Furthermore, at one locus we identified seven alleles, one of which is represented by as many as 19 cosegregating bands. It is unknown how common multiband alleles might be in natural populations, and their existence will cause problems in the assessment of relatedness by band-sharing analysis. We believe, therefore, that a pedigree analysis should be included in all DNA fingerprinting studies, where possible, in order to estimate the number of loci identified by a minisatellite DNA probe and to examine the nature of their alleles.

  10. Surface ozone in the urban area of Manaus, Amazonas, Brazil

    NASA Astrophysics Data System (ADS)

    Souza, R. A. F. D.; Costa, P. S.; Silva, C.; Godoi, R. M.; Martin, S. T.; Tota, J.; Barbosa, H. M.; Pauliquevis, T.; Ferreira De Brito, J.; Artaxo, P.; Manzi, A. O.; Wolf, S. A.; Cirino, G. G.

    2014-12-01

    When nitrogen oxides from vehicle and industrial emissions mix with volatile organic compounds from trees and plants with exposure to sunlight, a chemical reaction occurs contributing to ground-level ozone pollution. The preliminary results of the surface ozone study in urban area of Manaus, Amazonas State, Brazil, are presented for the first intensive operating period (IOP1) of the GoAmazon experiment (February/March 2014). Photochemical ozone production was found to be a regular process, with an afternoon maximum of the ozone mixing ratio of lower than 20 ppbv for cloudy days or clear sky weather. Typical ozone concentrations at mid-day were low (about 10 ppb). On the other hand, several high-value ozone episodes with surface ozone mixing ratios up to three times larger were registered during the dry season of 2013 (September/October). At the beginning of the wet season, the ozone concentration in Manaus decreased significantly, but diurnal variations can be found during the days with rainfall and other fast changes of meteorological conditions. Possible explanations of the nature of pulsations are discussed. Photochemical ozone production by local urban plumes of Manaus is named as a first possible source of the ozone concentration and biomass burning or power plant emissions are suggested as an alternative or an additional source.

  11. Uranium isotopes in groundwater occurring at Amazonas State, Brazil.

    PubMed

    da Silva, Márcio Luiz; Bonotto, Daniel Marcos

    2015-03-01

    This paper reports the behavior of the dissolved U-isotopes (238)U and (234)U in groundwater providing from 15 cities in Amazonas State, Brazil. The isotope dilution technique accompanied by alpha spectrometry were utilized for acquiring the U content and (234)U/(238)U activity ratio (AR) data, 0.01-1.4µgL(-1) and 1.0-3.5, respectively. These results suggest that the water is circulating in a reducing environment and leaching strata containing minerals with low uranium concentration. A tendency to increasing ARs values following the groundwater flow direction is identified in Manaus city. The AR also increases according to the SW-NE directions: Uarini→Tefé; Manacapuru→Manaus; Presidente Figueiredo→São Sebastião do Uatumã; and Boa Vista do Ramos→Parintins. Such trends are possibly related to several factors, among them the increasing acid character of the waters. The waters analyzed are used for human consumption and the highest dissolved U content is much lower than the maximum established by the World Health Organization. Therefore, in view of this radiological parameter they can be used for drinking purposes. Copyright © 2014 Elsevier Ltd. All rights reserved.

  12. Protein requirements for Blue-fronted Amazon (Amazona aestiva) growth.

    PubMed

    Carciofi, A C; Sanfilippo, L F; de-Oliveira, L D; do Amaral, P P; Prada, F

    2008-06-01

    The objective of this study was to evaluate the protein requirements for hand-rearing Blue-fronted Amazon parrots (Amazona aestiva). Forty hatchlings were fed semi-purified diets containing one of four (as-fed basis) protein levels: 13%, 18%, 23% and 28%. The experiment was carried out in a randomized block design with the initial weight of the nestling as the blocking factor and 10 parrots per protein level. Regression analysis was used to determine relationships between protein level and biometric measurements. The data indicated that 13% crude protein supported nestling growth with 18% being the minimum tested level required for maximum development. The optimal protein concentration for maximum weight gain was 24.4% (p = 0.08; r(2) = 0.25), tail length 23.7% (p = 0.09; r(2) = 0.19), wing length 23.0% (p = 0.07; r(2) = 0.17), tarsus length 21.3% (p = 0.06; r(2) = 0.10) and tarsus width 21.4% (p = 0.07; r(2) = 0.09). Tarsus measurements were larger in males (p < 0.05), indicating that sex must be considered when studying developing psittacines. These results were obtained using a highly digestible protein and a diet with moderate metabolizable energy levels.

  13. Retrobulbar adenocarcinoma in an Amazon parrot (Amazona autumnalis).

    PubMed

    Watson, Victoria E; Murdock, Jessica H; Cazzini, Paola; Schnellbacher, Rodney; Divers, Stephen J; Sakamoto, Kaori

    2013-03-01

    Retrobulbar neoplasms are not common in mammals and are even more infrequently seen in nonmammalian species. The current report describes a retrobulbar mass creating exophthalmia and neurologic signs in a red-lored Amazon parrot (Amazona autumnalis). A 27-year-old female parrot presented for a 3-day history of anorexia and a 2-week history of periocular soft tissue swelling and exophthalmia of the right eye. Physical examination revealed 9% dehydration and right eye exophthalmia with inability to retropulse the globe. A fine-needle aspirate was performed, and cytologic evaluation revealed necrotic debris with scattered clusters of epithelial cells, moderate numbers of macrophages, and few heterophils. Given the possibility of neoplasia and paucity of treatment options, the owners elected euthanasia and submitted the body for necropsy. A large, fluctuant, friable, red, retrobulbar mass with multiple areas of hemorrhage, on cut surface, was noted at necropsy. Histologically, the mass was composed of neoplastic, cuboidal to columnar epithelial cells, forming rosette-like glandular structures, admixed with abundant necrotic debris. The neoplastic cells were strongly positive for cytokeratin (AE1/AE3) by immunohistochemistry. Based on histopathology and immunohistochemistry, the mass was diagnosed as an adenocarcinoma.

  14. Intermittent bradyarrhythmia in a Hispaniolan Amazon parrot (Amazona ventralis).

    PubMed

    Rembert, Melanie S; Smith, Julie A; Strickland, Keith N; Tully, Thomas N

    2008-03-01

    A clinically normal 2-year-old Hispaniolan Amazon parrot (Amazona ventralis) was found to have periodic second-degree atrioventricular (AV) block with variable nodal conductions while anesthetized with isoflurane during a thermal-support research project. Arrhythmias were observed on 5 successive weekly electrocardiograms. A complete cardiac evaluation, including a diagnostic electrocardiogram, revealed intermittent bradyarrhythmias ranging from a 2:1 to a 7:1 second-degree AV block, with concurrent hypotensive episodes during the nodal blocks. Results of a complete blood cell count, plasma biochemical profile, blood gas analysis, and atropine-response test, as well as radiography and auscultation, revealed no obvious cause for the arrhythmias. Echocardiography demonstrated cardiac wall thickness, chamber size, and systolic function similar to other psittacine birds. On return to the colony, the parrot continued to be outwardly asymptomatic despite the dramatic conduction disturbances. Although cardiac arrhythmias, including second-degree AV block, have been widely reported in birds, the wide variation of nodal conductions, the intermittent nature, and an arrhythmia with a 7:1 second-degree AV block that spontaneously reverts to normal as seen in this case have not been well documented in parrots.

  15. Mortality Predictors in Patients with Severe Dengue in the State of Amazonas, Brazil

    PubMed Central

    Pinto, Rosemary Costa; de Castro, Daniel Barros; de Albuquerque, Bernardino Cláudio; Sampaio, Vanderson de Souza; dos Passos, Ricardo Augusto; da Costa, Cristiano Fernandes; Sadahiro, Megumi; Braga, José Ueleres

    2016-01-01

    Dengue is a major public health problem in tropical and subtropical areas worldwide. There is a lack of information on the risk factors for death due to severe dengue fever in developing countries, including Brazil where the state of Amazonas is located. This knowledge is important for decision making and the implementation of effective measures for patient care. This study aimed to identify factors associated with death among patients with severe dengue, in Amazonas from 2001 to 2013. We conducted a retrospective cohort study based on secondary data from the epidemiological surveillance of dengue provided by the Fundação de Vigilância em Saúde do Amazonas, FVS (Health Surveillance Foundation) of the Secretaria de Saúde do Amazonas, SUSAM (Health Secretariat of the State of Amazonas). Data on dengue cases were obtained from the SINAN (Notifiable Diseases Information System) and SIM (Mortality Information System) databases. We selected cases of severe dengue with laboratory confirmation, including dengue-related deaths of residents in the state of Amazonas from January 1, 2001, to December 31, 2013. The explanatory variables analyzed were sex, age, level of education, spontaneous hemorrhagic manifestations, plasma extravasation and platelet count. Patients who died due to severe dengue had more hematuria, gastrointestinal bleeding, and thrombocytopenia than the survivors. Considering the simultaneous effects of demographic and clinical characteristics with a multiple logistic regression model, it was observed that the factors associated with death were age >55 years (odds ratio [OR] 4.98), gastrointestinal bleeding (OR 10.26), hematuria (OR 5.07), and thrombocytopenia (OR 2.55). Gastrointestinal bleeding was the clinical sign most strongly associated with death, followed by hematuria and age >55 years. The study results showed that the best predictor of death from severe dengue is based on the characteristic of age >55 years, together with the clinical signs of

  16. Mortality Predictors in Patients with Severe Dengue in the State of Amazonas, Brazil.

    PubMed

    Pinto, Rosemary Costa; Castro, Daniel Barros de; Albuquerque, Bernardino Cláudio de; Sampaio, Vanderson de Souza; Passos, Ricardo Augusto Dos; Costa, Cristiano Fernandes da; Sadahiro, Megumi; Braga, José Ueleres

    2016-01-01

    Dengue is a major public health problem in tropical and subtropical areas worldwide. There is a lack of information on the risk factors for death due to severe dengue fever in developing countries, including Brazil where the state of Amazonas is located. This knowledge is important for decision making and the implementation of effective measures for patient care. This study aimed to identify factors associated with death among patients with severe dengue, in Amazonas from 2001 to 2013. We conducted a retrospective cohort study based on secondary data from the epidemiological surveillance of dengue provided by the Fundação de Vigilância em Saúde do Amazonas, FVS (Health Surveillance Foundation) of the Secretaria de Saúde do Amazonas, SUSAM (Health Secretariat of the State of Amazonas). Data on dengue cases were obtained from the SINAN (Notifiable Diseases Information System) and SIM (Mortality Information System) databases. We selected cases of severe dengue with laboratory confirmation, including dengue-related deaths of residents in the state of Amazonas from January 1, 2001, to December 31, 2013. The explanatory variables analyzed were sex, age, level of education, spontaneous hemorrhagic manifestations, plasma extravasation and platelet count. Patients who died due to severe dengue had more hematuria, gastrointestinal bleeding, and thrombocytopenia than the survivors. Considering the simultaneous effects of demographic and clinical characteristics with a multiple logistic regression model, it was observed that the factors associated with death were age >55 years (odds ratio [OR] 4.98), gastrointestinal bleeding (OR 10.26), hematuria (OR 5.07), and thrombocytopenia (OR 2.55). Gastrointestinal bleeding was the clinical sign most strongly associated with death, followed by hematuria and age >55 years. The study results showed that the best predictor of death from severe dengue is based on the characteristic of age >55 years, together with the clinical signs of

  17. New species of Cladiopsocus Roesler (Psocodea: 'Psocoptera': Psocomorpha: Cladiopsocidae) from the Colombian Amazonia.

    PubMed

    Obando, Ranulfo González; Aldrete, Alfonso N García; Carrejo, Nancy

    2016-06-22

    Ten species of Cladiopsocus Roesler were identified among recent collections from the Colombian departments of Amazonas and Putumayo. Eight new species were found, five from Putumayo and three from Amazonas, that are here described and illustrated. C. ramulosus (Enderlein) and C. domesticus (New) were found in the Putumayo department. The number of species in the genus is increased to 28, with two from Angola, and 26 from the Neotropics. An identification key to the males of the neotropical species is included.

  18. Labrets in Africa and Amazonia: medical implications and cultural determinants.

    PubMed

    Garve, Roland; Garve, Miriam; Türp, Jens C; Meyer, Christian G

    2017-02-01

    The custom of wearing labrets has a long tradition. Labrets appeared independently several thousand years ago in various culture groups in Asia, Europe, Africa and the Americas. Today, apart from diverse body modifications as increasingly practiced in western civilisations, lip plates and plugs are found among a small number of tribal groups only in Africa and Amazonia. We summarise the history of labrets in different societies, describe medical consequences of wearing lip plates and plugs for jaws and teeth and address relevant cultural issues.

  19. New geological framework for Western Amazonia (Brazil) and implications for biogeography and evolution

    NASA Astrophysics Data System (ADS)

    de Fátima Rossetti, Dilce; Mann de Toledo, Peter; Góes, Ana Maria

    2005-01-01

    Although many of the current hypotheses to explain the origin and distribution of the Amazon biodiversity has been based directly or indirectly on geological data, the reconstruction of the geological history of the Amazon region is still inadequate to analyze its relationship with the biodiversity. This work has the main goal to characterize the sedimentary successions formed in the Brazilian Amazon in the Neogene-Quaternary discussing the evolution of the depositional systems through time and analyzing their main controlling mechanisms in order to fill up this gap. Radar image interpretation, sedimentological studies, and radiocarbon dating allowed the mapping of Plio-Pleistocene to Holocene units along the Solimões-Amazonas River, Brazil. This integrated work led to the characterization of five sedimentary successions overlying Miocene deposits of the Solimões/Pebas Formation, which include the following: Içá Formation (Plio-Pleistocene), deposits Q1 (37,400-43,700 14C yr B.P.), deposits Q2 (27,200 14C yr B.P.), deposits Q3 (6730-2480 14C yr B.P.), and deposits Q4 (280-130 14C yr B.P.). These deposits occur mostly to the west of Manaus, forming NW-SE elongated belts that are progressively younger from SW to NE, indicating a subsiding basin with a depocenter that migrated to the NE. The reconstruction of the depositional history is consistent with significant changes in the landscapes. Hence, the closure of a large lake system at the end of the Miocene gave rise to the development of a Plio-Pleistocene fluvial system. This was yet very distinct from the modern drainage, with shallow, energetic, highly migrating, braided to anastomosed channels having an overall northeast outlet. This fluvial system formed probably under climatic conditions relatively drier than today's. During the early Pleistocene, there was pronounced erosion, followed by a renewed depositional phase ca. 40,000 14C yr B.P., with the development of prograding lobes and/or crevasse splays

  20. Complete mitochondrial genome of endangered Yellow-shouldered Amazon (Amazona barbadensis): two control region copies in parrot species of the Amazona genus.

    PubMed

    Urantowka, Adam Dawid; Hajduk, Kacper; Kosowska, Barbara

    2013-08-01

    Amazona barbadensis is an endangered species of parrot living in northern coastal Venezuela and in several Caribbean islands. In this study, we sequenced full mitochondrial genome of the considered species. The total length of the mitogenome was 18,983 bp and contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, duplicated control region, and degenerate copies of ND6 and tRNA (Glu) genes. High degree of identity between two copies of control region suggests their coincident evolution and functionality. Comparative analysis of both the control region sequences from four Amazona species revealed their 89.1% identity over a region of 1300 bp and indicates the presence of distinctive parts of two control region copies.

  1. Secondary Forests from Agricultural Abandonment in Amazonia 2000-2009

    NASA Technical Reports Server (NTRS)

    Morton, Douglas

    2010-01-01

    Ongoing negotiations to include reducing emissions from tropical deforestation and forest degradation (REDD+) in a post-Kyoto climate agreement highlight the critical role of satellite data for accurate and transparent accounting of forest cover changes. In addition to deforestation and degradation, knowledge of secondary forest dynamics is essential for full carbon accounting under REDD+. Land abandonment to secondary forests also frames one of the key tradeoffs for agricultural production in tropical forest countries-whether to incentivize secondary forest growth (for carbon sequestration and biodiversity conservation) or low-carbon expansion of agriculture or biofuels production in areas of secondary forests. We examined patterns of land abandonment to secondary forest across the arc of deforestation in Brazil and Bolivia using time series of annual Landsat and MODIS data from 2000-2009. Rates of land abandonment to secondary forest during 2002-2006 were less than 5% of deforestation rates in these years. Small areas of new secondary forest were scattered across the entire arc of deforestation, rather than concentrated in any specific region of the basin. Taken together, our analysis of the satellite data record emphasizes the difficulties of addressing the pool of new secondary forests in the context of REDD+ in Amazonia. Due to the small total area of secondary forests, land sparing through agricultural intensification will be an important element of efforts to reduce deforestation rates under REDD+ while improving agricultural productivity in Amazonia.

  2. The expansion of intensive agriculture and ranching in Brazilian Amazonia

    NASA Astrophysics Data System (ADS)

    Walker, Robert; DeFries, Ruth; del Carmen Vera-Diaz, Maria; Shimabukuro, Yosio; Venturieri, Adriano

    Agriculture in Amazonia has often provoked controversy, given the tremendous ecological value of the region's environment. First with ranching, and now with the soybean boom, tractors and cattle have marched across lands that for millennia supported only closed moist forest, resident ecosystems, and dispersed indigenous peoples. The present chapter considers this expansion, focusing on the Brazilian portion of the basin. Its premise is that effective Amazonian policy must be grounded on an understanding of the region's agriculture. The chapter pursues its objectives by first addressing the development initiatives that created the preconditions for Amazonia's current agricultural economy. The region is remote and has therefore required sustained government intervention to release its potential. The policy discussion is followed by descriptions of cattle ranching and soy farming. For each, market settings and trajectories of expansion are presented. Although these sectoral descriptions are data rich, they do not provide a conceptual framework for analyzing the environmental impacts of evolving market conditions. To accomplish this, the chapter invokes the classical land use model of von Thünen to explain Amazonian land cover dynamics in relation to soy-cattle linkages. It addresses these dynamics with remote sensing data from Mato Grosso, Pará, and Rondônia, and then discusses scenarios of agricultural advances on the forest. Conclusions follow, considering possible policy responses to deforestation, and the social context of agricultural intensification, with special attention to the issues of land tenure security and distributional equity.

  3. Slope erosion during the Late Glacial and early Holocene in southeastern Amazonia

    NASA Astrophysics Data System (ADS)

    Turcq, B.; Cordeiro, R. C.; Sifeddine, A.; Albuquerque, A. L.; Ledru, M. P.

    2003-04-01

    Continental erosion events occurred in Brazil since the LGM. These events are marked by geomorphological features (erosion scars associated with colluvial deposits), by deep-sea sedimentation (although this one is also influence by sea-level changes) and by lacustrine deposits that are reported here. Lacustrine deposits allow determining the chronology of these events and reveal that they are not synchronous in the different Brazilian regions. Three main phases can be identified: just after the LGM between 20,000 and 16,000 cal BP; during the Bolling-Allerod, between 14,000 and 12,500 cal BP and at the beginning of Holocene between 11,000 and 8000 cal BP. We studied four lakes from Carajas site in Southeastern Amazonia. The site presents the interest of a low control by vegetation of watershed erosion since the lake basins are, at present and probably in the past, covered by poorly developed vegetation. The phases of erosion are marked by high mineral accumulation in the cores. The clastic minerals are kaolinite, quartz and goethite. In three of the lakes the erosion phase proceed until 8000 cal BP. The present day clastic sediment accumulation is low, the top sediment being very rich in organic matter. As the vegetation of the watershed cannot substantially retain soil erosion, which is mainly restricted by the presence of a ferralitic crust, the main factor of this erosion seems to be the climate and the erosion capacity of the rainfalls. Occurrences of heavy rainfall events are probably responsible for the observed erosion. The main mechanism of precipitation in the Southeastern Amazon is the South Atlantic Convergence Zone (SACZ) organising the convection along a NW-SE stripe. Events of extreme rainfalls occur when the SACZ is enhanced by cold frontal systems migrating northward and joining the convection belt. The presence of cold vegetation taxa southward, in central Brazil, during the early Holocene indicates an intensification of cold frontal systems at

  4. Megafans and Trumpeter Bird Biodiversity-Psophia Phylogeography and Landscape Evolution in Amazonia

    NASA Technical Reports Server (NTRS)

    Wilkinson, Justin

    2014-01-01

    Based on geomorphic character and mapped geology, geologists have interpreted the landscape surrounding the Andes Mountains as becoming progressively younger to the East. These sedimentary materials filled the late Miocene swampland that formerly occupied central and western Amazonia. Apart from the ancient landscapes of the Guiana Highlands (top right, figure 1a), Zone Ac is the oldest, followed by Zone Aw, within which megafan Jw is older than megafan Je (figure 1a). DNA-based paleogeography of the trumpeters shows that younger clades diverge from parent lineages with increasing distance from the Andes chain. Thus, Psophia napensis diverges from the P. crepitans parent, and P. ochroptera diverges from P. napensis. The P. ochroptera population is confined solely to the Je megafan (figure 1a). The same trend is seen on the south side of the Amazon depression. Since the timing of the events seems to be of exactly the same order [post-Miocene for the land surfaces and trumpeter divergence within the last 3 million years (figure 1d)], it seems reasonable to think that the megafans provided the substrate on which new bird lineages could speciate. Such physical controls of evolution are becoming more important in the understanding of biodiversity.

  5. Temporal Scales of the Nocturnal Flow Within and Above a Forest Canopy in Amazonia

    NASA Astrophysics Data System (ADS)

    Santos, Daniel M.; Acevedo, Otávio C.; Chamecki, Marcelo; Fuentes, José D.; Gerken, Tobias; Stoy, Paul C.

    2016-10-01

    Multiresolution decomposition is applied to 10 months of nocturnal turbulence observations taken at eight levels within and above a forest canopy in Central Amazonia. The aim is to identify the contributions of different temporal scales of the flow above and within the canopy. Results show that turbulence intensity in the lower canopy is mostly affected by the static stability in the upper canopy. Horizontal velocity fluctuations peak at time scales longer than 100 s within the canopy, which correspond to the scale of non-turbulent submeso motions above the canopy. In the vertical velocity spectrum near the surface, the peak occurs at time scales around 100 s, which are larger than the time scales of the turbulent flow above the canopy. Heat-flux cospectra within the canopy peak at the same temporal scales as the vertical velocity fluctuations at that level, suggesting the existence of buoyancy driven turbulence. Case studies are presented as evidence that low-frequency fluctuations propagate towards the canopy interior more easily than does turbulence.

  6. Shuttle imaging radar A analysis of land use in Amazonia

    NASA Technical Reports Server (NTRS)

    Stone, Thomas A.; Woodwell, George M.

    1988-01-01

    Over large areas in the tropics, satellite imagery is the principal source of data on the area, current stature, and extent of disturbance of the forests. The information from imagery that covers large areas at low resolution is greatly enhanced when different types of imagery can be compared. The paper presents a comparison of data from Landsat MSS and from the Shuttle Imaging Radar (SIR-A) L band HH polarization data for sites in the Amazon Basin. Results indicate that SIR-A backscatter from the undisturbed forest was lower than that from some disturbed areas and from flooded forests and that SIR-A brightness, increases nonlinearly with the Landsat normalized difference vegetation index. It is hypothesized that the brightest radar returns in southern Amazonia are from newly cleared forests that are littered with standing and fallen tree boles that function as corner reflectors; and that backscatter will diminish from disturbed areas over time as fields are burned repeatedly.

  7. Drug tourism or spiritual healing? Ayahuasca seekers in Amazonia.

    PubMed

    Winkelman, Michael

    2005-06-01

    This research addresses the question of whether Westerners who seek traditional spiritual medicine known as ayahuasca can be best characterized as "drug tourists" or as people pursuing spiritual and therapeutic opportunities. Participants in an ayahuasca retreat in Amazonia were interviewed regarding their motivations for participation and the benefits they felt that they received. These findings from the interviews were organized to reveal common motivations and benefits. Contrary to the characterization as "drug tourists", the principal motivations can be characterized as: seeking spiritual relations and personal spiritual development; emotional healing; and the development of personal self-awareness, including contact with a sacred nature, God, spirits and plant and natural energies produced by the ayahuasca. The motivation and perceived benefits both point to transpersonal concerns, with the principal perceived benefits involving increased self awareness, insights and access to deeper levels of the self that enhanced personal development and the higher self, providing personal direction in life.

  8. An empirical approach to retrieve Evapotranspiration over Amazonia

    NASA Astrophysics Data System (ADS)

    Juarez, R.; Fu, R.; Myneni, R.; Bernardes, S.; Gao, H.

    2006-12-01

    The estimation of regional evapotranspiration (ET) over Amazonia remains uncertain since there are very few in situ observational with a limited footprint (~1km). The present work uses an empirical method to estimate ET over the Brazilian Legal Amazon (BLA) based on satellite measurements. Satellite data include the Enhanced Vegetation Index (EVI) from the Moderate Resolution Imagining Spectroradiometer (MODIS) and the surface radiation budget from the International Satellite Cloud Climatology Project (ISCCP) for the period (2000-2004). The empirical model was calibrated (2 sites) and validated (6 sites) using observational measurements in the BLA. Results from F-test and t-student test have shown that observed and calculated ET have the same variance and mean values, respectively.

  9. Two hundred years of local avian extinctions in eastern Amazonia.

    PubMed

    Moura, Nárgila G; Lees, Alexander C; Aleixo, Alexandre; Barlow, Jos; Dantas, Sidnei M; Ferreira, Joice; Lima, Maria de Fátima C; Gardner, Toby A

    2014-10-01

    Local, regional, and global extinctions caused by habitat loss, degradation, and fragmentation have been widely reported for the tropics. The patterns and drivers of this loss of species are now increasingly well known in Amazonia, but there remains a significant gap in understanding of long-term trends in species persistence and extinction in anthropogenic landscapes. Such a historical perspective is critical for understanding the status and trends of extant biodiversity as well as for identifying priorities to halt further losses. Using extensive historical data sets of specimen records and results of contemporary surveys, we searched for evidence of local extinctions of a terra firma rainforest avifauna over 200 years in a 2500 km(2) eastern Amazonian region around the Brazilian city of Belém. This region has the longest history of ornithological fieldwork in the entire Amazon basin and lies in the highly threatened Belém Centre of Endemism. We also compared our historically inferred extinction events with extensive data on species occurrences in a sample of catchments in a nearby municipality (Paragominas) that encompass a gradient of past forest loss. We found evidence for the possible extinction of 47 species (14% of the regional species pool) that were unreported from 1980 to 2013 (80% last recorded between 1900 and 1980). Seventeen species appear on the International Union for Conservation of Nature Red List, and many of these are large-bodied. The species lost from the region immediately around Belém are similar to those which are currently restricted to well-forested catchments in Paragominas. Although we anticipate the future rediscovery or recolonization of some species inferred to be extinct by our calculations, we also expect that there are likely to be additional local extinctions, not reported here, given the ongoing loss and degradation of remaining areas of native vegetation across eastern Amazonia. © 2014 Society for Conservation Biology.

  10. Fire-probability maps for the Brazilian Amazonia

    NASA Astrophysics Data System (ADS)

    Cardoso, Manoel; Sampaio, Gilvan; Obregon, Guillermo; Nobre, Carlos

    2010-05-01

    Most fires in Amazonia result from the combination between climate and land-use factors. They occur mainly in the dry season and are used as an inexpensive tool for land clearing and management. However, their unintended consequences are of important concern. Fire emissions are the most important sources of greenhouse gases and aerosols in the region, accidental fires are a major threat to protected areas, and frequent fires may lead to permanent conversion of forest areas into savannas. Fire-activity models have thus become important tools for environmental analyses in Amazonia. They are used, for example, in warning systems for monitoring the risk of burnings in protected areas, to improve the description of biogeochemical cycles and vegetation composition in ecosystem models, and to help estimate the long-term potential for savannas in biome models. Previous modeling studies for the whole region were produced in units of satellite fire pixels, which complicate their direct use for environmental applications. By reinterpreting remote-sensing based data using a statistical approach, we were able to calibrate models for the whole region in units of probability, or chance of fires to occur. The application of these models for years 2005 and 2006 provided maps of fire potential at 3-month and 0.25-deg resolution as a function of precipitation and distance from main roads. In both years, the performance of the resulting maps was better for the period July-September. During these months, most of satellite-based fire observations were located in areas with relatively high chance of fire, as determined by the modeled probability maps. In addition to reproduce reasonably well the areas presenting maximum fire activity as detected by remote sensing, the new results in units of probability are easier to apply than previous estimates from fire-pixel models.

  11. Fire-probability maps for the Brazilian Amazonia

    NASA Astrophysics Data System (ADS)

    Cardoso, M.; Nobre, C.; Obregon, G.; Sampaio, G.

    2009-04-01

    Most fires in Amazonia result from the combination between climate and land-use factors. They occur mainly in the dry season and are used as an inexpensive tool for land clearing and management. However, their unintended consequences are of important concern. Fire emissions are the most important sources of greenhouse gases and aerosols in the region, accidental fires are a major threat to protected areas, and frequent fires may lead to permanent conversion of forest areas into savannas. Fire-activity models have thus become important tools for environmental analyses in Amazonia. They are used, for example, in warning systems for monitoring the risk of burnings in protected areas, to improve the description of biogeochemical cycles and vegetation composition in ecosystem models, and to help estimate the long-term potential for savannas in biome models. Previous modeling studies for the whole region were produced in units of satellite fire pixels, which complicate their direct use for environmental applications. By reinterpreting remote-sensing based data using a statistical approach, we were able to calibrate models for the whole region in units of probability, or chance of fires to occur. The application of these models for years 2005 and 2006 provided maps of fire potential at 3-month and 0.25-deg resolution as a function of precipitation and distance from main roads. In both years, the performance of the resulting maps was better for the period July-September. During these months, most of satellite-based fire observations were located in areas with relatively high chance of fire, as determined by the modeled probability maps. In addition to reproduce reasonably well the areas presenting maximum fire activity as detected by remote sensing, the new results in units of probability are easier to apply than previous estimates from fire-pixel models.

  12. Marine intervals in Neogene fluvial deposits of western Amazonia

    NASA Astrophysics Data System (ADS)

    Boonstra, Melanie; Troelstra, Simon; Lammertsma, Emmy; Hoorn, Carina

    2014-05-01

    Amazonia is one of the most species rich areas on Earth, but this high diversity is not homogeneous over the entire region. Highest mammal and tree-alpha diversity is found in the fluvio-lacustrine Pebas system, a Neogene wetland associated with rapid radiation of species. The estuarine to marine origin of various modern Amazonian fish, plants, and invertebrates has been associated with past marine ingressions into this freshwater Pebas system. The exact nature and age of these invasions is, however, debated. Here we present new evidence from fluvial and fluvio-lacustrine deposits of Neogene age in southeast Colombia, that point to periods of widespread marine conditions in western Amazonia. Our evidence is based on an analysis of marine palynomorphs, such as organic linings of foraminifera and dinoflagellate cysts, present in dark sandy clay sediments that outcrop along the Caqueta and Amazon rivers. Characteristically, the foraminiferal linings can be assigned to three benthic morphotypes only, e.g. Ammonia, Elphidium and Trochammina. This low diversity assemblage is associated with estuarine/marginal marine conditions. No distinct marine elements such as shelf or planktonic species were encountered. The observed foraminiferal linings and dinocyst assemblages are typical for a (eutrophic) shallow marine environment, suggesting that the Pebas freshwater wetland system occasionally changed to (marginal) marine. Although some reworked elements are found, a typical Neogene dinocyst taxon is commonly found supporting in situ deposition. Sedimentological features typical for tidal conditions that are reported for sites in Peru and northeastern Brazil likely relate to these marine ingressions. Sea level changes as well as foreland basin development related to Andes formation may have facilitated the entry of marine water during the Neogene.

  13. A new species of Neotropical freshwater stingray (Chondrichthyes: Potamotrygonidae) from the Rio Negro, Amazonas, Brazil: the smallest species of Potamotrygon.

    PubMed

    Carvalho, Marcelo R De; Rosa, Ricardo S; Araújo, Maria Lúcia G De

    2016-05-04

    A new species of Potamotrygon is described from the Rio Negro drainage, Amazonas, Brazil. In spite of being cited or pictured several times in the scientific and aquarium fish literature since the 19th Century, it had been misidentified and still lacked a scientific name. Potamotrygon wallacei, n. sp., is diagnosed by the following characters: dorsal surface of disc light brown, with black irregularly-shaped vermiculate markings forming an amphora- or Ω-shaped figure on mid-disc, delimiting light brown reniform areas at disc center, and with subcircular light brown ocellate markings on disc margins; small body size (smallest known Potamotrygon species; largest examined specimen measured 310 mm DW); dorsal spines on tail usually rather low, without broad bases, in one to rarely three irregular rows, but extending posteriorly only to tail mid-length and not to caudal stings, with altogether relatively few spines; denticles on posterior mid-disc and tail base Y-shaped, with a central, anterior, bulbous cusp and usually two posterior pairs of smaller, rounded cusps; and single (anterior) angular cartilage. The new species is similar to P. orbignyi and other "reticulated" species in having a single (anterior) angular cartilage and in the color pattern of the tail, but is easily distinguished based on its size, dorsal tail spine arrangement, and specific details of color pattern.

  14. Hansen's disease in the state of Amazonas: policy and institutional treatment of a disease.

    PubMed

    Schweickardt, Julio Cesar; Xerez, Luena Matheus de

    2015-12-01

    This article discusses the historical aspects of the policies for controlling Hansen's disease in the state of Amazonas from the second half of the nineteenth century until the dismantling of this model in 1978. We present the historical changes in the local institutions and policies, and their relationship with national policies. The history and policies related to Hansen's disease in the state of Amazonas are analyzed through the following institutions: Umirisal, the Oswaldo Cruz Dispensary, the Paricatuba Leprosarium, the Antônio Aleixo Colony, and the Gustavo Capanema Preventorium. We seek to show that these institutions cared for the people who suffered from Hansen's disease and those related to them, and were also responsible for carrying out the policies for fighting and controlling the disease.

  15. Progression of the load of waterborne and intestinal parasitic diseases in the State of Amazonas.

    PubMed

    Martins, Marilaine; Lacerda, Marcus Vinícius Guimarães; Monteiro, Wuelton Marcelo; Moura, Marco Antonio Saboia; Santos, Eyde Cristianne Saraiva; Saraceni, Valéria; Saraiva, Maria Graças Gomes

    2015-01-01

    In the State of Amazonas, Brazil, urban expansion together with precarious basic sanitation conditions and human settlement on river banks has contributed to the persistence of waterborne and intestinal parasitic diseases. Time series of the recorded cases of cholera, typhoid fever, hepatitis A and leptospirosis are described, using data from different levels of the surveillance systems. The sources for intestinal parasitosis prevalence data (non-compulsory reporting in Brazil) were Medical Literature Analysis and Retrieval System Online (MEDLINE), Literatura Latino-Americana (LILACS) and the annals of major scientific meetings. Relevant papers and abstracts in all languages were accessed by two independent reviewers. The references cited by each relevant paper were scrutinized to locate additional papers. Despite its initial dissemination across the entire State of Amazonas, cholera was controlled in 1998. The magnitude of typhoid fever has decreased; however, a pattern characterized by eventual outbreaks still remains. Leptospirosis is an increasing cause of concern in association with the annual floods. The overall prevalence of intestinal parasites is high regardless of the municipality and the characteristics of areas and populations. The incidence of hepatitis A has decreased over the past decade. A comparison of older and recent surveys shows that the prevalence of intestinal parasitic diseases has remained constant. The load of waterborne and intestinal parasitic diseases ranks high among the health problems present in the State of Amazonas. Interventions aiming at basic sanitation and vaccination for hepatitis A were formulated and implemented, but assessment of their effectiveness in the targeted populations is still needed.

  16. Impact of biomass burning aerosol on the monsoon circulation transition over Amazonia

    SciTech Connect

    Zhang, Y.; Fu, Rong; Yu, Hongbin; Qian, Yun; Dickinson, Robert; Silva Dias, Maria Assuncao F.; da Silva Dias, Pedro L.; Fernandes, Katia

    2009-05-30

    Ensemble simulations of a regional climate model (RegCM3) forced by aerosol radiative forcing suggest that biomass burning aerosols can work against the seasonal monsoon circulation transition, thus re-enforce the dry season rainfall pattern for Southern Amazonia. Strongly absorbing smoke aerosols warm and stabilize the lower troposphere within the smoke center in southern Amazonia (where aerosol optical depth > 0.3). These changes increase the surface pressure in the smoke center, weaken the southward surface pressure gradient between northern and southern Amazonia, and consequently induce an anomalous moisture divergence in the smoke center and an anomalous convergence occurs in northwestern Amazonia (5°S-5°N, 60°W-40 70°W). The increased atmospheric thermodynamic stability, surface pressure, and divergent flow in Southern Amazonia may inhibit synoptic cyclonic activities propagated from extratropical South America, and re-enforce winter-like synoptic cyclonic activities and rainfall in southeastern Brazil, Paraguay and northeastern Argentina.

  17. Workplan for Catalyzing Collaboration with Amazonian Universities in the Large Scale Biosphere-Atmosphere Experiment in Amazonia (LBA)

    NASA Technical Reports Server (NTRS)

    Brown, I. Foster; Moreira, Adriana

    1997-01-01

    Success of the Large-Scale Biosphere-Atmospheric Experiment in Amazonia (LBA) program depends on several critical factors, the most important being the effective participation of Amazonian researchers and institutions. Without host-county counterparts, particularly in Amazonia, many important studies cannot he undertaken due either to lack of qualified persons or to legal constraints. No less important, the acceptance of the LBA program in Amazonia is also dependent on what LBA can do for improving the scientific expertise in Amazonia. Gaining the active investment of Amazonian scientists in a comprehensive research program is not a trivial task. Potential collaborators are few, particularly where much of the research was to be originally focused - the southern arc of Brazilian Amazonia. The mid-term goals of the LBA Committee on Training and Education are to increase the number of collaborators and to demonstrate that LBA will be of benefit to the region.

  18. Arcella peruviana sp. nov. (Amoebozoa: Arcellinida, Arcellidae), a new species from a tropical peatland in Amazonia.

    PubMed

    Reczuga, Monika K; Swindles, Graeme T; Grewling, Łukasz; Lamentowicz, Mariusz

    2015-10-01

    There has only been one study on the ecology of testate amoebae from Amazonian peatlands, despite Amazonia being a biodiversity hotspot of global importance. During analysis of litter samples from Aucayacu peatland, western (Peruvian) Amazonia, we discovered a testate amoeba with a distinct morphology unlike any other species reported previously. We describe a new species, Arcella peruviana, based on its distinct morphology, compare it to morphologically similar species and provide information about its ecology. This new species is characterised by a distinct cruciform aperture (diameter ranges between 12 and 17μm) which is slightly invaginated. The test is small (height 43-57μm) and polygonal in cross-section. Our discovery suggests the existence of an unknown diversity of testate amoebae in Amazonia. The absence of the new Arcella species in more intensively-sampled regions supports the view that protists have restricted distributions.

  19. Biodiversity below ground: probing the subterranean ant fauna of Amazonia

    NASA Astrophysics Data System (ADS)

    Ryder Wilkie, Kari T.; Mertl, Amy L.; Traniello, James F. A.

    2007-09-01

    Ants are abundant, diverse, and ecologically dominant in tropical forests. Subterranean ants in particular are thought to have a significant environmental impact, although difficulties associated with collecting ants underground and examining their ecology and behavior have limited research. In this paper, we present the results of a study of subterranean ant diversity in Amazonian Ecuador that employs a novel probe to facilitate the discovery of species inhabiting the soil horizon. Forty-seven species of ants in 19 genera, including new and apparently rare species, were collected in probes. Approximately 19% of the species collected at different depths in the soil were unique to probe samples. Analysis of similarity (ANOSIM) results showed that the species composition of ants collected with the probe was significantly different from samples collected using other techniques. Additionally, ANOSIM computations indicated the species assemblage of ants collected 12.5 cm below the surface was significantly different from those found at 25, 37.5, and 50 cm. Ant diversity and species accumulation rates decreased with increasing depth. There were no species unique to the lowest depths, suggesting that subterranean ants may not be distributed deep in the soil in Amazonia due to the high water table. The technique we describe could be used to gain new insights into the distribution and biology of subterranean ant species and other members of the species-rich soil invertebrate macrofauna.

  20. Deforestation and threats to the biodiversity of Amazonia.

    PubMed

    Vieira, I C G; Toledo, P M; Silva, J M C; Higuchi, H

    2008-11-01

    This is a review of the main factors currently perceived as threats to the biodiversity of Amazonia. Deforestation and the expansion of the agricultural frontier go hand in hand within the context of occupation and land use in the region, followed by a hasty process of industrialization since the 1950s and, more recently, by a nation-wide attempt to adapt Brazil to economic globalization. Intensive agriculture and cattle-raising, lack of territorial planning, the monoculture of certain crops often promoted by official agencies, and the introduction of exotic species by cultivation are some of the factors affecting Amazonian biodiversity. There are still large gaps in knowledge that need to be dealt with for a better understanding of the local ecosystems so as to allow their preservation, but such investigation is subjected to manifold hindrances by misinformation, disinformation and sheer ignorance from the legal authorities and influential media. Data available for select groups of organisms indicate that the magnitude of the loss and waste of natural resources associated with deforestation is staggering, with estimated numbers of lost birds and primates being over ten times that of such animals illegally commercialized around the world in one year. The challenges to be met for an eventual reversal of this situation demand more systematic and concerted studies, the consolidation of new and existing research groups, and a call for a halt to activities depleting the Amazonian rainforest.

  1. Biodiversity below ground: probing the subterranean ant fauna of Amazonia.

    PubMed

    Ryder Wilkie, Kari T; Mertl, Amy L; Traniello, James F A

    2007-09-01

    Ants are abundant, diverse, and ecologically dominant in tropical forests. Subterranean ants in particular are thought to have a significant environmental impact, although difficulties associated with collecting ants underground and examining their ecology and behavior have limited research. In this paper, we present the results of a study of subterranean ant diversity in Amazonian Ecuador that employs a novel probe to facilitate the discovery of species inhabiting the soil horizon. Forty-seven species of ants in 19 genera, including new and apparently rare species, were collected in probes. Approximately 19% of the species collected at different depths in the soil were unique to probe samples. Analysis of similarity (ANOSIM) results showed that the species composition of ants collected with the probe was significantly different from samples collected using other techniques. Additionally, ANOSIM computations indicated the species assemblage of ants collected 12.5 cm below the surface was significantly different from those found at 25, 37.5, and 50 cm. Ant diversity and species accumulation rates decreased with increasing depth. There were no species unique to the lowest depths, suggesting that subterranean ants may not be distributed deep in the soil in Amazonia due to the high water table. The technique we describe could be used to gain new insights into the distribution and biology of subterranean ant species and other members of the species-rich soil invertebrate macrofauna.

  2. CO2 and CO emission rates from three forest fire controlled experiments in Western Amazonia

    NASA Astrophysics Data System (ADS)

    Carvalho, J. A., Jr.; Amaral, S. S.; Costa, M. A. M.; Soares Neto, T. G.; Veras, C. A. G.; Costa, F. S.; van Leeuwen, T. T.; Krieger Filho, G. C.; Tourigny, E.; Forti, M. C.; Fostier, A. H.; Siqueira, M. B.; Santos, J. C.; Lima, B. A.; Cascão, P.; Ortega, G.; Frade, E. F., Jr.

    2016-06-01

    Forests represent an important role in the control of atmospheric emissions through carbon capture. However, in forest fires, the carbon stored during photosynthesis is released into the atmosphere. The carbon quantification, in forest burning, is important for the development of measures for its control. The aim of this study was to quantify CO2 and CO emissions of forest fires in Western Amazonia. In this paper, results are described of forest fire experiments conducted in Cruzeiro do Sul and Rio Branco, state of Acre, and Candeias do Jamari, state of Rondônia, Brazil. These cities are located in the Western portion of the Brazilian Amazon region. The biomass content per hectare, in the virgin forest, was measured by indirect methods using formulas with parameters of forest inventories in the central hectare of the test site. The combustion completeness was estimated by randomly selecting 10% of the total logs and twelve 2 × 2 m2 areas along three transects and examining their consumption rates by the fire. The logs were used to determine the combustion completeness of the larger materials (characteristic diameters larger than 10 cm) and the 2 × 2 m2 areas to determine the combustion completeness of small-size materials (those with characteristic diameters lower than 10 cm) and the. The overall biomass consumption by fire was estimated to be 40.0%, 41.2% and 26.2%, in Cruzeiro do Sul, Rio Branco and Candeias do Jamari, respectively. Considering that the combustion gases of carbon in open fires contain approximately 90.0% of CO2 and 10.0% of CO in volumetric basis, the average emission rates of these gases by the burning process, in the three sites, were estimated as 191 ± 46.7 t ha-1 and 13.5 ± 3.3 t ha-1, respectively.

  3. Anthropogenic Emissions Shift Pathways of Organic PM1 Production in Amazonia

    NASA Astrophysics Data System (ADS)

    de Sá, S. S.; Palm, B. B.; Campuzano-Jost, P.; Day, D. A.; Hu, W.; Jimenez, J. L.; Newburn, M. K.; Alexander, M. L. L.; Isaacman-VanWertz, G. A.; Yee, L.; Goldstein, A. H.; Brito, J.; Carbone, S.; Artaxo, P.; Springston, S. R.; Souza, R. A. F. D.; Manzi, A. O.; Surratt, J. D.; Martin, S. T.

    2016-12-01

    As part of GoAmazon2014/5, a high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS) was deployed to characterize the composition of fine-mode particulate matter (PM) and provide insights into the production of organic PM in the central Amazon basin, Brazil. Through a combination of meteorology, emissions, and chemistry, the T3 research site (located 70 km downwind of Manaus) was affected by biogenic emissions from the tropical rainforest that were periodically mixed with urban outflow from the Manaus metropolitan area as well as with biomass burning plumes. Results from the T3 site are presented in the context of measurements at T0a (ATTO) and T2, representing predominantly clean and polluted conditions, respectively. At T3, the non-refractory PM1 mass concentration was dominated by the organic component in both the wet and dry seasons (80% by mass). The analysis of the results aims at delineating the anthropogenic impact on the measurements, especially focusing on the effect of NOx emissions on the formation of organic PM. Positive matrix factorization (PMF) analysis is applied to the time series of mass spectra of the organic component of PM1. The resulting factors provide information on the relative and time-varying contributions of different sources and pathways to organic PM production. The time trend of the different statistical factors is investigated against co-located measurements, and compared between background and polluted conditions. Results suggest that polluted conditions are associated with higher organic mass concentrations, with some pathways being favored under those conditions while others are inhibited. This analysis and results represent a step toward the goal of improving the understanding of anthropogenic influences on the mass concentrations and composition of PM1 in Amazonia.

  4. Impacts of Amazonia biomass burning aerosols assessed from short-range weather forecasts

    NASA Astrophysics Data System (ADS)

    Kolusu, S. R.; Marsham, J. H.; Mulcahy, J.; Johnson, B.; Dunning, C.; Bush, M.; Spracklen, D. V.

    2015-07-01

    The direct radiative impacts of Biomass Burning Aerosols (BBA) on meteorology are investigated using short-range forecasts from the Met Office Unified Model (MetUM) over South America during the South American Biomass Burning Analysis (SAMBBA). The impacts are evaluated using a set of three simulations: (i) no aerosols, (ii) with monthly mean aerosol climatologies and (iii) with prognostic aerosols modelled using the Coupled Large-scale Aerosol Simulator for Studies in Climate (CLASSIC) scheme. Comparison with observations show that the prognostic CLASSIC scheme provides the best representation of BBA. The impacts of BBA are quantified over central and southern Amazonia from the first and second day of two day forecasts during 14 September-03 October 2012. On average, during the first day of the forecast, including prognostic BBA reduces the clear-sky net radiation at the surface by 15 ± 1 W m-2, and reduces net TOA radiation by 8 ± 1 W m-2, with a direct atmospheric warming of 7 ± 1 W m-2. BBA-induced reductions in all-sky radiation are smaller in magnitude: 9.0 ± 1 W m-2 at the surface and 4.0 ± 1 W m-2 at TOA. In this modelling study the BBA therefore exert an overall cooling influence on the Earth-atmosphere system, although some levels of the atmosphere are directly warmed by the absorption of solar radiation. Due to the reduction of net radiative flux at the surface the mean 2 m air temperature is reduced by around 0.1 ± 0.02 °C. The BBA also cools the boundary layer (BL) but warms air above by around 0.2 °C due to the absorption of shortwave radiation. The overall impact is to reduce the BL depth by around 19 ± 8 m. These differences in heating lead to a more anticyclonic circulation at 700 hPa, with winds changing by around 0.6 m s-1. Inclusion of BBA in the MetUM significantly improves forecasts of temperature and relative humidity, but effects were small compared with model error and differences between effects from climatological and prognostic

  5. Impacts of Amazonia biomass burning aerosols assessed from short-range weather forecasts

    NASA Astrophysics Data System (ADS)

    Kolusu, S. R.; Marsham, J. H.; Mulcahy, J.; Johnson, B.; Dunning, C.; Bush, M.; Spracklen, D. V.

    2015-11-01

    The direct radiative impacts of biomass burning aerosols (BBA) on meteorology are investigated using short-range forecasts from the Met Office Unified Model (MetUM) over South America during the South American Biomass Burning Analysis (SAMBBA). The impacts are evaluated using a set of three simulations: (i) no aerosols, (ii) with monthly mean aerosol climatologies and (iii) with prognostic aerosols modelled using the Coupled Large-scale Aerosol Simulator for Studies In Climate (CLASSIC) scheme. Comparison with observations show that the prognostic CLASSIC scheme provides the best representation of BBA. The impacts of BBA are quantified over central and southern Amazonia from the first and second day of 2-day forecasts during 14 September-3 October 2012. On average, during the first day of the forecast, including prognostic BBA reduces the clear-sky net radiation at the surface by 15 ± 1 W m-2 and reduces net top-of-atmosphere (TOA) radiation by 8 ± 1 W m-2, with a direct atmospheric warming of 7 ± 1 W m-2. BBA-induced reductions in all-sky radiation are smaller in magnitude: 9.0 ± 1 W m-2 at the surface and 4.0 ± 1 W m-2 at TOA. In this modelling study the BBA therefore exert an overall cooling influence on the Earth-atmosphere system, although some levels of the atmosphere are directly warmed by the absorption of solar radiation. Due to the reduction of net radiative flux at the surface, the mean 2 m air temperature is reduced by around 0.1 ± 0.02 °C. The BBA also cools the boundary layer (BL) but warms air above by around 0.2 °C due to the absorption of shortwave radiation. The overall impact is to reduce the BL depth by around 19 ± 8 m. These differences in heating lead to a more anticyclonic circulation at 700 hPa, with winds changing by around 0.6 m s-1. Inclusion of climatological or prognostic BBA in the MetUM makes a small but significant improvement in forecasts of temperature and relative humidity, but improvements were small compare with model

  6. Chronology of Terra Firme formation in western Amazonia and implications for the diversification of Amazonian biota

    NASA Astrophysics Data System (ADS)

    Pupim, Fabiano do N.; Sawakushi, André O.; Hartmann, Gelvam A.; Savian, Jairo F.; Kern, Andrea K.; Mineli, Thays D.; Cruz, Francisco W.; Almeida, Renato P.; Grohmann, Carlos H.; Ribas, Camila C.; d'Horta, Fernando M.; Bertassoli, Dailson J.; Marconato, André; Nogueira, Luciana; Lohmann, Lúcia G.

    2017-04-01

    The shift from a large wetland dominated by avulsive channels and flooded forests to the incised transcontinental Amazon River valley (Várzea) bounded by non-flooded forests (Terra Firme) is suggested as one of the main drivers of diversification of the mega diverse Amazonian Biota. Nonetheless, there is no consensus about the timing of this landscape shift, with the current literature suggesting a period that ranges from the Miocene (11 Ma) and the Late Pleistocene (100 ka). This uncertainty may be due to a lack of absolute ages for the sediments forming Terra Firme forest substrates in western Amazonian lowlands. In Brazil, the Içá Formation represents the uppermost fluvial deposits of Terra Firme forests substrates in western Amazonia. Therefore, a reliable chronology for the last depositional stage of the Içá Formation is key for an improved understanding of the formation of the current Terra Firme-Várzea system. Four sediment profiles were sampled along the margins of the Solimões and Içá rivers for Optically Stimulated Luminescence (OSL) dating, geomagnetic excursions, and palynological analysis. OSL dating was performed in twelve samples using a Single Aliquot Regeneration (SAR) protocol in quartz sand grains. The equivalent doses ranged from 47 to 130 Gy (Central Age Model) and the dose rate values ranged from 0.4 to 2.0 Gy/ka. The resulting sediment burial ages range from 48 to 112 ka. Paleomagnetic data were obtained from samples collected at same profiles sampled for OSL dating and results suggest the presence of Post-Blake geomagnetic excursion ( 100 ka). The age of 100 ka for Post-Blake excursion are adopted for the Geomagnetic Instability Time Scale. Pollen assemblage data show a similarity to a more modern flora and the presence of Alnus clearly points towards Pleistocene deposition as it is unknown before in South America. The combined OSL, paleomagnetism and pollen data is a robust geochronological dataset that indicates Late Pleistocene

  7. Environmental Controls of Soil Organic Carbon in Soils Across Amazonia

    NASA Astrophysics Data System (ADS)

    Quesada, Carlos Alberto; Paz, Claudia; Phillips, Oliver; Nonato Araujo Filho, Raimundo; Lloyd, Jon

    2015-04-01

    Amazonian forests store and cycle a significant amount of carbon on its soils and vegetation. Yet, Amazonian forests are now subject to strong environmental pressure from both land use and climate change. Some of the more dramatic model projections for the future of the Amazon predict a major change in precipitation followed by savanization of most currently forested areas, resulting in major carbon losses to the atmosphere. However, how soil carbon stocks will respond to climatic and land use changes depend largely on how soil carbon is stabilized. Amazonian soils are highly diverse, being very variable in their weathering levels and chemical and physical properties, and thus it is important to consider how the different soils of the Basin stabilize and store soil organic carbon (SOC). The wide variation in soil weathering levels present in Amazonia, suggests that soil groups with contrasting pedogenetic development should differ in their predominant mechanism of SOC stabilization. In this study we investigated the edaphic, mineralogical and climatic controls of SOC concentration in 147 pristine forest soils across nine different countries in Amazonia, encompassing 14 different WRB soil groups. Soil samples were collected in 1 ha permanent plots used for forest dynamics studies as part of the RAINFOR project. Only 0-30 cm deep averages are reported here. Soil samples were analyzed for carbon and nitrogen and for their chemical (exchangeable bases, phosphorus, pH) and physical properties, (particle size, bulk density) and mineralogy through standard selective dissolution techniques (Fe and Al oxides) and by semi-quantitative X-Ray diffraction. In Addition, selected soils from each soil group had SOC fractionated by physical and chemical techniques. Our results indicate that different stabilization mechanisms are responsible for SOC stabilization in Amazonian soils with contrasting pedogenetic level. Ferralsols and Acrisols were found to have uniform mineralogy

  8. Tracking anthropogenic influence on isoprene chemistry over Amazonia

    NASA Astrophysics Data System (ADS)

    Liu, Y.; McKinney, K. A.; Watson, T. B.; Springston, S. R.; Seco, R.; Park, J. H.; Kim, S.; Shilling, J. E.; Guenther, A. B.; Dorris, M. R.; Thayer, M.; Keutsch, F. N.; Yee, L.; Isaacman, G. A.; Goldstein, A. H.; Wurm, F.; Ferreira De Brito, J.; Artaxo, P.; Silva Dias, M. A. F.; Longo, K.; Souza, R. A. F. D.; Manzi, A. O.; Martin, S. T.

    2014-12-01

    Primarily emitted by vegetation, isoprene is the dominant nonmethane hydrocarbon in the atmosphere. Photooxidation of isoprene has a large influence on the oxidation capacity of the atmosphere and the production of secondary organic aerosol (SOA). As a part of the GoAmazon2014 Experiment, isoprene and some of its oxidation products were measured using a proton-transfer-reaction time-of-flight mass spectrometer (PTR-TOF-MS) at a research site 60 km west of the city of Manaus, Brazil. The fetch of the research site oscillated between the extremes of a pristine atmosphere and the interactions of heavy pollution from Manaus with the natural environment, which allowed for an assessment of the modifications of natural isoprene chemistry by anthropogenic pollution over Amazonia. Photooxidation of isoprene leads to chemically different oxidation products depending on the fate of isoprene peroxy radicals (ISOPOO), but different oxidation products can produce the same ions in PTR-MS analysis due to similarity in their chemical structures. A cold trap was deployed in front of the PTR-TOF-MS for separation and differential classification of some of these isoprene oxidation products. For example, isoprene-derived hydroperoxides (C5H10O3) and methyl vinyl ketone/methacrolein (C4H6O), which are the major oxidation products of the HO2 and NO pathways of ISOPOO reaction, respectively, and both detected as C4H7O+ ion by PTR-MS, were separately measured. Using the measurements of these and other oxidation products of isoprene by PTR-TOF-MS and other complementary measurements, the isoprene chemistry (particularly the fate of ISOPOO) under pristine and polluted scenarios are compared and the implication for SOA formation is discussed.

  9. Emergent Hydrological Regimes in Amazonia Determine Vegetation Productivity and Structure.

    NASA Astrophysics Data System (ADS)

    Ahlström, A.; Canadell, J.; Schurgers, G.; Berry, J. A.; Guan, K.; Jackson, R. B.

    2016-12-01

    The Amazon rain forest has a disproportionate significance for global CO2 storage and biodiversity. Earth system models (ESMs) that estimate future climate and vegetation show little agreement in simulations in Amazonia. Here we show that evapotranspiration (ET), gross primary productivity (GPP) and above ground biomass in both models and empirical data align on an emergent hydrologically determined relationship that describes a functional relationship with annual precipitation (P). The physical relationship describes the potential for plant productivity and has a breakpoint at 2000 mm annual precipitation, where the system transitions between water and radiation limitation of annual ET. While ESM GPP is generally underestimated due to a low-bias in their internally generated P, their response to annual precipitation generally matches empirical data. It is different for biomass: ESMs show some ability in capturing biomass levels in the energy-limited wet hydrological regime above 2000 mm annual precipitation but they do not fully capture the biomass structure tipping point found in empirical data at the hydrological regime breakpoint that coincide with the forest-savanna transition. This discrepancy is likely due to the relatively simple representation of disturbances, primarily fires, and vegetation dynamics found in ESMs, and implies that ESMs likely overestimate the resilience to a potential future drying of the Amazon. Future elevated CO2 may increase plant water use efficiency and shift GPP upwards, but it will not affect the breakpoint between the regimes or the susceptibility of the forest which are both determined by precipitation and its role in determining the hydrological regime. This analysis reconciles and explains the findings of many studies on the Amazon. Our results suggests that future Amazonian biomass is governed by changes in precipitation, vegetation dynamics and disturbances, none of which are well predicted and represented by ESMs

  10. Neotectonics, flooding patterns and landscape evolution in southern Amazonia

    NASA Astrophysics Data System (ADS)

    Lombardo, U.

    2014-07-01

    The paper examines the role of neotectonic activity in the evolution of the landscape in southern Amazonia during the Holocene. It uses both new and published data based on the analysis of remote sensing imagery and extensive field work in the Llanos de Moxos, Bolivian Amazon. The study of the region's modern and paleo rivers, ria lakes, paleosols and topography provides a strong case in favour of the thesis that the northern part of the Llanos de Moxos constitutes the southern margin of the Fitzcarrald arch and that it has experienced uplift during the Holocene. The paper assesses the extent and timing of the neotectonic activity in light of the new data and reconstructs the evolution of the landscape since the late Pleistocene. The evidence suggests that at least two uplift events took place: a first uplift in the late Pleistocene, which caused the formation of Lake Oceano, and a second uplift during the mid-Holocene, which formed Lake Rogaguado. These two uplifts appear to be linked to the knickpoints observed close to the towns of Guayaramerín and Puerto Siles respectively. The backwater effect due to these uplifts transformed the region's major rivers in seasonal ria lakes, causing the deposition of thick organic clay layers along the Beni, Mamoré and Madre de Dios river banks. I argue that neotectonic episodes could have dramatically changed the drainage of the Llanos, determining its flooding regime, soil properties and forest-savannah ecotone. These results stress the need for geomorphologists, paleoecologists and archaeologists to take into account neotectonics when reconstructing the region's past.

  11. Neotectonics, flooding patterns and landscape evolution in southern Amazonia

    NASA Astrophysics Data System (ADS)

    Lombardo, U.

    2014-12-01

    The paper examines the role of neotectonic activity in the evolution of the landscape in southern Amazonia during the Holocene. It uses both new and published data based on the analysis of remote sensing imagery and extensive field work in the Llanos de Moxos, Bolivian Amazon. The study of the region's modern and palaeorivers, ria lakes, palaeosols and topography provides a strong case in favour of the thesis that the northern part of the Llanos de Moxos constitutes the southern margin of the Fitzcarrald Arch and that it has experienced uplift during the Holocene. The paper assesses the extent and timing of the neotectonic activity in light of the new data and reconstructs the evolution of the landscape since the late Pleistocene. The evidence suggests that at least two uplift events took place: a first uplift in the late Pleistocene, which caused the formation of Lake Oceano, and a second uplift during the mid-Holocene, which formed Lake Rogaguado. These two uplifts appear to be linked to the knickpoints observed close to the towns of Guayaramerín and Puerto Siles respectively. The backwater effect due to these uplifts transformed the region's major rivers in seasonal ria lakes, causing the deposition of thick organic clay layers along the Beni, Mamoré and Madre de Dios river banks. I argue that neotectonic episodes could have dramatically changed the drainage of the Llanos de Moxos, determining its flooding regime, soil properties and forest-savannah ecotone. These results stress the need for geomorphologists, palaeo-ecologists and archaeologists to take into account neotectonics when reconstructing the region's past.

  12. After trees die: quantities and determinants of necromass across Amazonia

    NASA Astrophysics Data System (ADS)

    Chao, K.-J.; Phillips, O. L.; Baker, T. R.; Peacock, J.; Lopez-Gonzalez, G.; Vásquez Martínez, R.; Monteagudo, A.; Torres-Lezama, A.

    2009-08-01

    The Amazon basin, one of the most substantial biomass carbon pools on earth, is characterised by strong macroecological gradients in biomass, mortality rates, and wood density from west to east. These gradients could affect necromass stocks, but this has not yet been tested. This study aims to assess the stocks and determinants of necromass across Amazonian forests. Field-based and literature data were used to find relationships between necromass and possible determinants. Furthermore, a simple model was applied to estimate and extrapolate necromass stocks across terra firma Amazonian forests. In eight northwestern and three northeastern Amazonian permanent plots, volumes of coarse woody debris (≥10 cm diameter) were measured in the field and the density of each decay class was estimated. Forest structure and historical mortality data were used to determine the factors controlling necromass. Necromass is greater in forests with low stem mortality rates (northeast) rather than in forests with high stem mortality rates (northwest) (58.5±10.6 and 27.3±3.2 Mg ha-1, respectively). Using all published necromass values, we find that necromass across terra firma forests in Amazonia is positively related to both forest dynamics (mortality mass inputs and a surrogate for decomposition rate (average wood density of living trees)) and forest structure (biomass), but is better explained by forest dynamics. We propose an improved method to estimate necromass for plots where necromass has not been measured. The estimates, together with other actual measurements of necromass, were scaled-up to project a total Amazonian necromass of 9.6±1.0 Pg C. The ratio of necromass (on average weighted by forest region) to coarse aboveground biomass is 0.127. Overall, we find (1) a strong spatial trend in necromass in parallel with other macroecological gradients and (2) that necromass is a substantial component of the carbon pool in the Amazon.

  13. Sedative Effects of Intranasal Midazolam Administration in Wild Caught Blue-fronted Amazon (Amazona aestiva) and Orange-winged Amazon (Amazona amazonica) Parrots.

    PubMed

    Schaffer, Débora P H; de Araújo, Nayone L L C; Raposo, Ana Cláudia S; Filho, Emanoel F Martins; Vieira, João Victor R; Oriá, Arianne P

    2017-09-01

    Safe and effective sedation protocols are important for chemical restraint of birds in clinical and diagnostic procedures, such as clinical evaluations, radiographic positioning, and blood collection. These protocols may reduce stress and ease the management of wild-caught birds, which are susceptible to injury or death when exposed to stressful situations. We compare the sedative effect of intranasal midazolam in wild-caught blue-fronted (Amazona aestiva) and orange-winged (Amazona amazonica) Amazon parrots. Ten adult parrots of each species (n = 20), of unknown sex, weighing 0.337 ± 0.04 (blue-fronted) and 0.390 ± 0.03 kg (orange-winged), kg were used. Midazolam (2 mg/kg) was administered intranasally and the total volume of the drug was divided equally between the 2 nostrils. Onset time and total sedation time were assessed. Satisfactory sedation for clinical evaluation was induced in all birds. Onset time and total sedation times were similar in both species: 5.36 ± 1.16 and 25.40 ± 5.72 minutes, respectively, for blue-fronted Amazons and 5.09 ± 0.89 and 27.10 ± 3.73 minutes, respectively, for orange-winged Amazons. A total of 15 animals showed absence of vocalization, with moderate muscle relaxation and wing movement upon handling, and 2 animals presented with lateral recumbence, with intense muscle relaxation and no wing movement, requiring no restraint. Three blue-fronted Amazons had no effective sedation. Intranasally administered midazolam at a dose of 2 mg/kg effectively promoted sedative effects with a short latency time and fast recovery in wild-caught parrots.

  14. Numerical analysis of palynological data from Neogene fluvial sediments as evidence for rainforest dynamics in western Amazonia

    NASA Astrophysics Data System (ADS)

    Salamanca, Sonia; van Manen, Milan; Hoorn, Carina

    2014-05-01

    Deep-time records that give an insight into the composition and dynamics of the ancestral Amazon rain forest are rare. Yet to understand the modern biodiversity patterns it is important to untangle the long-term evolution of this forest. Sampling Neogene strata requires drilling operations or complex fieldwork along the rivers where outcrops generally are small. In the nineties an exceptionally good exposure of fluvial sediments of early Miocene age (17.7-16.1 Ma) was documented near the island of Mariñame (Caquetá River, Colombian Amazonia) (Hoorn, 1994). This 60 m sediment succession consists of quartz-rich sands with a circa 10 m black, sandy clay intercalation. Palynomorphs are well preserved in these organic-rich clays and palynological analysis indicated high pollen diversity and changes in composition following changes in the sedimentary environment and water composition (see van Soelen et al., this session). A numerical analysis in R (2013) of the existing data, using a number of multivariate and other statistical techniques now shows a gradient of change in the composition of the Miocene palynological assemblages. Non-metric-multidimensional scaling using distance matrixes (Oksanen, 2012) and their visualizations in correlograms (Friendly, 2002) indicate that the regional (palm) swamp forests of Mauritiides franciscoi (Mauritia), frequently found together with other palms such as Psilamonocolpites amazonicus (Euterpe?) and Psilamonocolpites rinconii, were affected by a marine incursion. The latter is suggested by the change of composition and the presence of estuarine elements such as Zonocostites ramonae (Rhizophora), foraminifer linings and dinoflagellate cysts, which became common during the marine event. In the older part of the section, and at the top, Rhoipites guianensis (Sterculiaceae/Tiliaceae) is quite abundant, in contrast with the relatively low abundance of M. franciscoi. The numerical analysis allowed us to: a) group the pollen data into 3

  15. Deforestation, drainage network, indigenous status, and geographical differences of malaria in the State of Amazonas.

    PubMed

    Terrazas, Wagner Cosme Morhy; Sampaio, Vanderson de Souza; de Castro, Daniel Barros; Pinto, Rosemary Costa; de Albuquerque, Bernardino Cláudio; Sadahiro, Megumi; Dos Passos, Ricardo Augusto; Braga, José Ueleres

    2015-09-30

    Malaria is a major public health problem worldwide. In Brazil, an average of 420,000 cases of malaria have been reported annually in the last 12 years, of which 99.7 % occurred in the Amazon region. This study aimed to analyse the distribution of malaria in the State of Amazonas and the influence of indigenous malaria in this scenario, to evaluate the correlation between incidence rates and socio-economic and environmental factors, and to evaluate the performance of health surveillance services. This ecological study used secondary data obtained from the SIVEP-MALARIA malaria surveillance programme. The relationship between demographic, socio-economic and environmental factors, the performance of health surveillance services and the incidence of malaria in Amazonas, a multiple linear regression model was used. The crude rate of malaria in Amazonas was 4142.72 cases per 100,000 inhabitants between 2003 and 2012. The incidence rates for the indigenous and non-indigenous populations were 12,976.02 and 3749.82, respectively, with an indigenous population attributable fraction of only 8 %. The results of the linear regression analysis indicated a negative correlation between the two socio-economic indicators (municipal human development index (MHDI) and poverty rate) and the incidence of malaria in the period. With regard to the environmental indicators (average annual deforestation rate and percentage of areas under the influence of watercourses), the correlation with the incidence rate was positive. The findings underscore the importance of implementing economic and social development policies articulated with strategic actions of environmental protection and health care for the population.

  16. A historical overview of leprosy epidemiology and control activities in Amazonas, Brazil.

    PubMed

    Cunha, Carolina; Pedrosa, Valderiza Lourenço; Dias, Luiz Carlos; Braga, Andréa; Chrusciak-Talhari, Anette; Santos, Mônica; Penna, Gerson Oliveira; Talhari, Sinésio; Talhari, Carolina

    2015-01-01

    Leprosy is an ancient infectious disease caused by Mycobacterium leprae. According to comparative genomics studies, this disease originated in Eastern Africa or the Near East and spread with successive human migrations. The Europeans and North Africans introduced leprosy into West Africa and the Americas within the past 500 years. In Brazil, this disease arrived with the colonizers who disembarked at the first colonies, Rio de Janeiro, Salvador and Recife, at the end of the sixteenth century, after which it was spread to the other states. In 1854, the first leprosy cases were identified in State of Amazonas in the north of Brazil. The increasing number of leprosy cases and the need for treatment and disease control led to the creation of places to isolate patients, known as leprosaria. One of them, Colonia Antônio Aleixo was built in Amazonas in 1956 according to the most advanced recommendations for isolation at that time and was deactivated in 1979. The history of the Alfredo da Matta Center (AMC), which was the first leprosy dispensary created in 1955, parallels the history of leprosy in the state. Over the years, the AMC has become one of the best training centers for leprosy, general dermatology and sexually transmitted diseases in Brazil. In addition to being responsible for leprosy control programs in the state, the AMC has carried out training programs on leprosy diagnosis and treatment for health professionals in Manaus and other municipalities of the state, aiming to increase the coverage of leprosy control activities. This paper provides a historical overview of leprosy in State of Amazonas, which is an endemic state in Brazil.

  17. ECOLOGICAL RESEARCH IN THE LARGE-SCALE BIOSPHERE–ATMOSPHERE EXPERIMENT IN AMAZONIA: EARLY RESULTS.

    Treesearch

    M. Keller; A. Alencar; G. P. Asner; B. Braswell; M. Bustamente; E. Davidson; T. Feldpausch; E. Fern ndes; M. Goulden; P. Kabat; B. Kruijt; F. Luizao; S. Miller; D. Markewitz; A. D. Nobre; C. A. Nobre; N. Priante Filho; H. Rocha; P. Silva Dias; C von Randow; G. L. Vourlitis

    2004-01-01

    The Large-scale Biosphere–Atmosphere Experiment in Amazonia (LBA) is a multinational, interdisciplinary research program led by Brazil. Ecological studies in LBA focus on how tropical forest conversion, regrowth, and selective logging influence carbon storage, nutrient dynamics, trace gas fluxes, and the prospect for sustainable land use in the Amazon region. Early...

  18. The Pleasures and Pitfalls of a "Participatory" Documentation Project: An Experience in Northwestern Amazonia

    ERIC Educational Resources Information Center

    Stenzel, Kristine

    2014-01-01

    This article adds a voice from Amazonia to the reflective discussion on documentation projects designed within a "participatory" or "collaborative" paradigm of language research. It offers a critical assessment of one such documentation project carried out from 2007-2011 with the Kotiria and Wa'ikhana (East Tukano) language…

  19. Crommelin’s and Davidson’s visit to Amazonia and the 1919 total solar eclipse

    NASA Astrophysics Data System (ADS)

    de Lima, Marcelo C.; Crispino, Luís C. B.

    2016-04-01

    We report the visit to Amazonia of the British astronomers Crommelin and Davidson, in their way to the Brazilian city Sobral to perform the measurements related to the total solar eclipse of 29th May 1919, as an experimental test of the Theory of General Relativity.

  20. Evaluating ipe (Tabebuia, Bignoniaceae) logging in Amazonia: sustainable management or catalyst for forest degradation?

    Treesearch

    Mark Schulze; James Grogan; Chris Uhl; Marco Lentini; Edson. Vidal

    2008-01-01

    Prized for their dense, rot-resistant wood, Tabebuia impetiginosa and T. serratifolia (vernacular name = ipeˆ ) are among the most valuable Amazonian timbers. We analyzed the geographical extent, spread and trajectory of ipeˆ logging in Brazilian Amazonia, and evaluated harvest pressure on this forest resource. We also examine Tabebuia population response to reduced-...

  1. Contrasting andean geodynamics drive evolution of lowland taxa in western Amazonia

    USDA-ARS?s Scientific Manuscript database

    Using a palm lineage of 15 species (Astrocaryum sect. Huicungo), we tested an hypothesis that past geologic events in western Amazonia influenced the modern configuration of the upper Amazon drainage and thus diversification and distribution of these palsm, which found only in this region. The chang...

  2. Relating Change Patterns to Anthropogenic Processes to Assess Sustainability: A Case Study in Amazonia

    Treesearch

    Libia Patricia Peralta Agudelo

    2006-01-01

    This work focuses on identifying deforestation patterns and relating these to social processes in an extractive reserve of Acre (western Amazonia). Using multitemporal satellite imagery deforestation is observed as a series of distinctive patches against the background of forest cover. The study of patterns emphasizes the important relationships existing between...

  3. Carbon storage in Amazonia during the last glacial maximum: secondary data and uncertainties.

    PubMed

    Turcq, Bruno; Cordeiro, Renato C; Sifeddine, Abdefettah; Simões Filho, Francisco F L; Albuquerque, Ana Luisa S; Abrão, Jorge J

    2002-12-01

    The Amazonian forest is, due to its great size, carbon storage capacity and present-day variability in carbon uptake and release, an important component of the global carbon cycle. Paleo-environmental reconstruction is difficult for Amazonia due to the scarcity of primary palynological data and the mis-interpretation of some secondary data. Studies of lacustrine sediment records have shown that Amazonia has known periods in which the climate was drier than it is today. However, not all geomorphological features such as dunes, and slope erosion, which are thought to indicate rainforest regression, date from the time of the Late Glacial Maximum (LGM) and these features do not necessarily correspond to episodes of forest regression. There is also uncertainty concerning LGM carbon storage due to rainforest soils and biomass estimates. Soil carbon content may decrease moderately during the LGM, whereas rainforest biomass may change considerably in response to changes in the global environment. Biomass per unit area in Amazonia has probably been reduced by the cumulative effects of low CO2 concentration, a drier climate and lower temperatures. As few paleo-vegetation data are available, there is considerable uncertainty concerning the amount of carbon stored in Amazonia during the LGM, which may have corresponded to 44-94% of the carbon currently stored in biomass and soils.

  4. The Pleasures and Pitfalls of a "Participatory" Documentation Project: An Experience in Northwestern Amazonia

    ERIC Educational Resources Information Center

    Stenzel, Kristine

    2014-01-01

    This article adds a voice from Amazonia to the reflective discussion on documentation projects designed within a "participatory" or "collaborative" paradigm of language research. It offers a critical assessment of one such documentation project carried out from 2007-2011 with the Kotiria and Wa'ikhana (East Tukano) language…

  5. A new species of Moenkhausia Eigenmann, 1903 (Characiformes, Characidae) from the rio Amazonas basin, Brazil.

    PubMed

    Oliveira, Gustavo D; Marinho, Manoela M F

    2016-03-24

    Moenkhausia abyss is herein described from the rio Amazonas basin lowlands. The new species can be distinguished from the congeners by presenting the combination of the following characters: a dark blotch located on the upper caudal-fin lobe and the lower lobe hyaline, 25-29 branched anal-fin rays, humeral spot rectangular, vertically oriented, extending horizontally through two or two and a half scales and located over the third to the fifth lateral line scales, five longitudinal scale rows above the lateral line, predorsal scales arranged in a single not interrupted median row and 30-34 perforated lateral line scales. Brief comments on Moenkhausia megalops are provided.

  6. Combined Hepatocellular-Cholangiocarcinoma in a Yellow-Headed Amazon (Amazona oratrix)

    PubMed Central

    TENNAKOON, Anusha Hemamali; IZAWA, Takeshi; FUJITA, Daisuke; DENDA, Yuki; SETO, Eiko; SASAI, Hiroshi; KUWAMURA, Mitsuru; YAMATE, Jyoji

    2013-01-01

    ABSTRACT A 9-year-old male Yellow-headed Amazon (Amazona oratrix) with a history of anorexia and vomiting died of a liver tumor. The tumor consisted of neoplastic cells with hepatocellular and cholangiocellular differentiations and their intermingled areas. Neoplastic hepatocytes showed islands or trabecular growth with vacuolated eosinophilic cytoplasm. Cells showing biliary differentiation formed ducts or tubules lined by cytokeratin AE1/AE3-positive epithelia, accompanied by desmoplasia consisting of myofibroblasts reacting to α-smooth muscle actin and desmin. The tumor was diagnosed as a combined hepatocellular-cholangiocarcinoma, which is very rare in the avian. PMID:23800973

  7. Mycobacterium marinum infection in a blue-fronted Amazon parrot (Amazona aestiva).

    PubMed

    Hannon, David E; Bemis, David A; Garner, Michael M

    2012-12-01

    A blue-fronted Amazon parrot (Amazona aestiva) was presented with a granuloma involving the proximal rhinotheca and extending into the rostral sinuses. Mycobacterium marinum was diagnosed based on results of biopsy and culture. Treatment was initiated with clarithromycin, rifampin, and ethambutol, but the bird died 4 months after the onset of antimicrobial therapy. Additional granulomas were found in the left lung and liver on postmortem examination. Mycobacterial isolation on postmortem samples was unsuccessful. This is the first report of Mycobacterium marinum in a bird.

  8. Combined hepatocellular-cholangiocarcinoma in a Yellow-headed Amazon (Amazona oratrix).

    PubMed

    Tennakoon, Anusha Hemamali; Izawa, Takeshi; Fujita, Daisuke; Denda, Yuki; Seto, Eiko; Sasai, Hiroshi; Kuwamura, Mitsuru; Yamate, Jyoji

    2013-11-01

    A 9-year-old male Yellow-headed Amazon (Amazona oratrix) with a history of anorexia and vomiting died of a liver tumor. The tumor consisted of neoplastic cells with hepatocellular and cholangiocellular differentiations and their intermingled areas. Neoplastic hepatocytes showed islands or trabecular growth with vacuolated eosinophilic cytoplasm. Cells showing biliary differentiation formed ducts or tubules lined by cytokeratin AE1/AE3-positive epithelia, accompanied by desmoplasia consisting of myofibroblasts reacting to α-smooth muscle actin and desmin. The tumor was diagnosed as a combined hepatocellular-cholangiocarcinoma, which is very rare in the avian.

  9. Effects of prescribed fire on conditions inside a Cuban parrot (Amazona Leucocephala) surrogate nesting cavity on Great Abaco, Bahamas

    Treesearch

    Joseph O' Brien; Caroline Stahala; Gina P. Mori; Mac Callaham; Chris M. Bergh

    2006-01-01

    Cuban Parrots (Amazona leucocephala) on the island of Great Abaco in the Bahamas forage and nest in native pine forests. The population is unique in that the birds nest in limestone solution holes on the forest floor. Bahamian pine forests are fire-dependent with a frequent surface fire regime. The effects of fire on the parrots, especially while nesting, are not well...

  10. Pelecitus tercostatus (Molin, 1960) (Nematoda, Onchocercidae) in Amazona vinacea (Aves, Psittaciformes) from Argentina: morphological details and clinical findings.

    PubMed

    Diaz, Julia I; Di Nucci, Dante L; Falzone, Martín P; Demergassi, Natalia M; Fernanda Lois, M; Zalazar, Raúl O; Navone, Graciela T; Gachen, Gustavo G

    2012-06-01

    Pelecitus tercostatus (Molin, 1860) (Onchocercidae, Dirofilariinae) was found in the leg of a Vinaceous-breasted Parrot Amazona vinacea (Aves, Psittaciformes) from Misiones, Argentina. The present report enlarges the host distribution of the species and represents the first record of any nematode in A. vinacea. The macroscopic lesions produced in the bird are also described.

  11. Impact of Biomass Burning Aerosols on the Biosphere over Amazonia

    NASA Astrophysics Data System (ADS)

    Malavelle, F.; Haywood, J.; Mercado, L.; Folberth, G.; Bellouin, N.

    2014-12-01

    Biomass burning (BB) smoke from deforestation and the burning of agricultural waste emit a complex cocktail of aerosol particles and gases. BB emissions show a regional hotspot over South America on the edges of Amazonia. These major perturbations and impacts on surface temperature, surface fluxes, chemistry, radiation, rainfall, may have significant consequent impacts on the Amazon rainforest, the largest and most productive carbon store on the planet. There is therefore potential for very significant interaction and interplay between aerosols, clouds, radiation and the biosphere in the region. Terrestrial carbon production (i.e. photosynthesis) is intimately tied to the supply of photosynthetically active radiation (PAR - i.e. wavelengths between 300-690 nm). PAR in sufficient intensity and duration is critical for plant growth. However, if a decrease in total radiation is accompanied by an increase in the component of diffuse radiation, plant productivity may increase due to higher light use efficiency per unit of PAR and less photosynthetic saturation. This effect, sometimes referred as diffuse light fertilization effect, could have increased the global land carbon sink by approximately one quarter during the global dimming period and is expected to be a least as important locally. By directly interacting with radiation, BB aerosols significantly reduce the total amount of PAR available to plant canopies. In addition, BB aerosols also play a centre role in cloud formation because they provide the necessary cloud condensation nuclei, hence indirectly altering the water cycle and the components and quantity of PAR. In this presentation, we use the recent observations from the South American Biomass Burning Analysis (SAMBBA) to explore the impact of radiation changes on the carbon cycle in the Amazon region caused by BB emissions. A parameterisation of the impact of diffuse and direct radiation upon photosynthesis rates and net primary productivity in the

  12. Remote sensing of forest dynamics and land use in Amazonia

    NASA Astrophysics Data System (ADS)

    Toomey, Michael Paul

    The rich, vast Amazonian ecosystem is directly and indirectly threatened by human activities; remote sensing serves as an essential tool for monitoring, understanding and mitigating these threats. A multi-faceted body of work is described here, addressing three major issues that employ and advance remote sensing techniques for the study of Amazonia and other tropical rainforest regions. In Chapter 2, canopy reflectance modeling and satellite observations were used to quantify the effect of epiphylls on remote sensing of humid forests. Modeling simulations demonstrated sensitivity of canopy-level near infrared and green reflectance to epiphylls on leaves. Time series of Moderate Resolution Imaging Spectrometer (MODIS) data corroborated the modeling results, suggesting a degree of coupling between epiphyll cover and vegetation indices which must be accounted for when using optical remote sensing in humid forests. In Chapter 4, 11 years (2000--2010) of MODIS land surface temperature (LST) data covering the entire Amazon basin were used to ascertain the role of heat stress during droughts in 2005 and 2010. Preliminary accuracy assessments showed that LST data provided reasonably accurate estimates of daytime air temperatures (RMSE = 1.45°C; Chapter 3). There were moderate to strong correlations between LST-based air temperature estimates and tower measurements (mean r = 0.64), illustrating a sensitivity to temporal variability. During both droughts, MODIS LST data detected anomalously high daytime and nighttime canopy temperatures throughout drought-affected regions. Multivariate linear models of LST and precipitation anomalies explained 65.1% of the variability in forest biomass losses, as determined from a wide network of forest inventory plots. These results suggest that models should incorporate both heat and moisture to predict drought effects on tropical forests. In Chapter 5, I performed high spatial and temporal resolution modeling of carbon stocks and fluxes

  13. Time Resolved Measurements of Primary Biogenic Aerosol Particles in Amazonia

    NASA Astrophysics Data System (ADS)

    Wollny, A. G.; Garland, R.; Pöschl, U.

    2009-04-01

    Biogenic aerosols are ubiquitous in the Earth's atmosphere and they influence atmospheric chemistry and physics, the biosphere, climate, and public health. They play an important role in the spread of biological organisms and reproductive materials, and they can cause or enhance human, animal, and plant diseases. Moreover, they influence the Earth's energy budget by scattering and absorbing radiation, and they can initiate the formation of clouds and precipitation as cloud condensation and ice nuclei. The composition, abundance, and origin of biogenic aerosol particles and components are, however, still not well understood and poorly quantified. Prominent examples of primary biogenic aerosol particles, which are directly emitted from the biosphere to the atmosphere, are pollen, bacteria, fungal spores, viruses, and fragments of animals and plants. During the Amazonian Aerosol Characterization Experiment (AMAZE-08) a large number of aerosol and gas-phase measurements were taken on a remote site close to Manaus, Brazil, during a period of five weeks in February and March 2008. This presented study is focused on data from an ultraviolet aerodynamic particle sizer (UVAPS, TSI inc.) that has been deployed for the first time in Amazonia. In this instrument, particle counting and aerodynamic sizing over the range of 0.5-20 µm are complemented by the measurement of UV fluorescence at 355 nm (excitation) and 420-575 nm (emission), respectively. Fluorescence at these wavelengths is characteristic for reduced pyridine nucleotides (e.g., NAD(P)H) and for riboflavin, which are specific for living cells. Thus particles exhibiting fluorescence signals can be regarded as "viable aerosols" or "fluorescent bioparticles" (FBAP), and their concentration can be considered as lower limit for the actual abundance of primary biogenic aerosol particles. Data from the UVAPS were averaged over 5 minute time intervals. The presence of bioparticles in the observed size range has been

  14. Continuous soil carbon storage of old permanent pastures in Amazonia.

    PubMed

    Stahl, Clément; Fontaine, Sébastien; Klumpp, Katja; Picon-Cochard, Catherine; Grise, Marcia Mascarenhas; Dezécache, Camille; Ponchant, Lise; Freycon, Vincent; Blanc, Lilian; Bonal, Damien; Burban, Benoit; Soussana, Jean-François; Blanfort, Vincent

    2016-12-14

    Amazonian forests continuously accumulate carbon (C) in biomass and in soil, representing a carbon sink of 0.42-0.65 GtC yr(-1) . In recent decades, more than 15% of Amazonian forests have been converted into pastures, resulting in net C emissions (~200 tC ha(-1) ) due to biomass burning and litter mineralization in the first years after deforestation. However, little is known about the capacity of tropical pastures to restore a C sink. Our study shows in French Amazonia that the C storage observed in native forest can be partly restored in old (≥24 year) tropical pastures managed with a low stocking rate (±1 LSU ha(-1) ) and without the use of fire since their establishment. A unique combination of a large chronosequence study and eddy covariance measurements showed that pastures stored between -1.27 ± 0.37 and -5.31 ± 2.08 tC ha(-1)  yr(-1) while the nearby native forest stored -3.31 ± 0.44 tC ha(-1)  yr(-1) . This carbon is mainly sequestered in the humus of deep soil layers (20-100 cm), whereas no C storage was observed in the 0- to 20-cm layer. C storage in C4 tropical pasture is associated with the installation and development of C3 species, which increase either the input of N to the ecosystem or the C:N ratio of soil organic matter. Efforts to curb deforestation remain an obvious priority to preserve forest C stocks and biodiversity. However, our results show that if sustainable management is applied in tropical pastures coming from deforestation (avoiding fires and overgrazing, using a grazing rotation plan and a mixture of C3 and C4 species), they can ensure a continuous C storage, thereby adding to the current C sink of Amazonian forests.

  15. Health and Reproductive Assessment of Selected Puerto Rican Parrots ( Amazona vittata ) in Captivity.

    PubMed

    Clubb, Susan; Velez, Jafet; Garner, Michael M; Zaias, Julia; Cray, Carolyn

    2015-12-01

    The Puerto Rican parrot ( Amazona vittata ) has become an iconic and high-profile conservation species. The cornerstone of the recovery plan for this critically endangered species is an active captive breeding program, management of the wild population, and a long-term reintroduction program. In 2002, 40 adult Puerto Rican parrots that had not produced viable offspring were selected for reproductive assessment at 2 aviary populations in Puerto Rico (Iguaca and Río Abajo), which are the only sources of parrots for release. The goal was to enhance reproductive potential and produce productive pairings in an attempt to augment the population growth and provide ample individuals for reintroduction. Seven Hispanolian Amazon parrots ( Amazona ventralis ) that were used as surrogate parents for the Puerto Rican parrots were also included in the study. This assessment included physical examination, endoscopic evaluation, hematologic and plasma biochemical profiles, viral screening, and hormonal assays. Results of general physical examination and hematologic and plasma biochemical testing revealed overall good health and condition of this subset of the population of Puerto Rican parrots; no major infectious diseases were found. Endoscopic examination also revealed overall good health and condition, especially of females. The apparent low fertility of male birds warrants further investigation. The findings helped to define causes of reproductive failure in the selected pairs and individual birds. New pairings resulting from the assessment helped to augment reproduction of this critically endangered species.

  16. Spatial and temporal dynamics of shifting cultivation in the middle-Amazonas river: Expansion and intensification

    PubMed Central

    Dutrieux, Loïc Paul; Siti, Latifah; Peña-Claros, Marielos; Bongers, Frans

    2017-01-01

    Shifting cultivation is the main land-use system transforming landscapes in riverine Amazonia. Increased concentration of the human population around villages and increasing market integration during the last decades may be causing agricultural intensification. Studies have shown that agricultural intensification, i.e. higher number of swidden-fallow cycles and shorter fallow periods, reduces crop productivity of swiddens and the regrowth capacity of fallows, undermining the resilience of the shifting cultivation system as a whole. We investigated the temporal and spatial dynamics of shifting cultivation in Brazilian Amazonia to test the hypotheses that (i) agriculture has become more intensive over time, and (ii) patterns of land-use intensity are related to land accessibility and human population density. We applied a breakpoint-detection algorithm to Landsat time-series spanning three decades (1984–2015) and retrieved the temporal dynamics of shifting cultivation fields, which go through alternating phases of crop production (swidden) and secondary forest regrowth (fallow). We found that fallow-period length has decreased from 6.4 to 5.1 years on average, and that expansion over old-growth forest has slowed down over time. Shorter fallow periods and higher frequency of slash and burn cycles are practiced closer to residences and around larger villages. Our results indicate that shifting cultivation in riverine Amazonia has gone through a process of agricultural intensification in the past three decades. The resulting landscape is predominantly covered by young secondary forests (≤ 12 yrs old), and 20% of it have gone through intensive use. Reversing this trend and avoiding the negative consequences of agricultural intensification requires land use planning that accounts for the constraints of land use in riverine areas. PMID:28727828

  17. Soil and vegetation carbon stocks in Brazilian Western Amazonia: relationships and ecological implications for natural landscapes.

    PubMed

    Schaefer, C E G R; do Amaral, E F; de Mendonça, B A F; Oliveira, H; Lani, J L; Costa, L M; Fernandes Filho, E I

    2008-05-01

    The relationships between soils attributes, soil carbon stocks and vegetation carbon stocks are poorly know in Amazonia, even at regional scale. In this paper, we used the large and reliable soil database from Western Amazonia obtained from the RADAMBRASIL project and recent estimates of vegetation biomass to investigate some environmental relationships, quantifying C stocks of intact ecosystem in Western Amazonia. The results allowed separating the western Amazonia into 6 sectors, called pedo-zones: Roraima, Rio Negro Basin, Tertiary Plateaux of the Amazon, Javari-Juruá-Purus lowland, Acre Basin and Rondonia uplands. The highest C stock for the whole soil is observed in the Acre and in the Rio Negro sectors. In the former, this is due to the high nutrient status and high clay activity, whereas in the latter, it is attributed to a downward carbon movement attributed to widespread podzolization and arenization, forming spodic horizons. The youthful nature of shallow soils of the Javari-Juruá-Purus lowlands, associated with high Al, results in a high phytomass C/soil C ratio. A similar trend was observed for the shallow soils from the Roraima and Rondonia highlands. A consistent east-west decline in biomass carbon in the Rio Negro Basin sector is associated with increasing rainfall and higher sand amounts. It is related to lesser C protection and greater C loss of sandy soils, subjected to active chemical leaching and widespread podzolization. Also, these soils possess lower cation exchangeable capacity and lower water retention capacity. Zones where deeply weathered Latosols dominate have a overall pattern of high C sequestration, and greater than the shallower soils from the upper Amazon, west of Madeira and Negro rivers. This was attributed to deeper incorporation of carbon in these clayey and highly pedo-bioturbated soils. The results highlight the urgent need for refining soil data at an appropriate scale for C stocks calculations purposes in Amazonia. There

  18. Characterizing patterns of agricultural land use in Amazonia by merging satellite imagery and census data

    NASA Astrophysics Data System (ADS)

    Cardille, Jeffrey Alan

    In recent decades, millions of hectares of Amazonian primary forest, cerrado, and secondary forest have been cleared to support a dramatically increasing number of cattle and humans. With plans proposed for major new highways and utilities in the basin, development is highly likely to continue in coming years. Conversion to human use threatens to change the climate, ecosystems, and natural resources of Amazonia, and these effects are due not only to changes in land cover but to the land use management practices that follow. Unfortunately, we lack basin-wide information about land use across Amazonia. A key reason for this dearth of information is that earth-observing satellites designed to interpret land cover are prone to miss the land use changes within; in an area encompassing millions of square kilometers, it is impossible to visit more than a small portion of the study region to quantify land use activities. Agricultural censuses suggest a strategy to fill this gap: in Amazonia, they provide the only ground-surveyed land use information---yet because they are not easily reconciled with satellite-based land cover information, census data are underutilized. The research forming this dissertation presents a new, basin-wide depiction of land use in Amazonia by developing and applying new tools for understanding the past, current, and future impact of agricultural development. Specifically, this dissertation: (1) presents a new detailed understanding of the distribution and density of agricultural land use practices in Amazonia in the mid-1990s by fusing agricultural census data with satellite-derived land cover classifications; (2) assesses historical changes in agriculture of the previous decades; and (3) describes and applies new general techniques for the rapid update of land use data sets and maps using satellite imagery and census data. The fusion of census and satellite data described here advances our understanding by uniting the strengths of two distinct

  19. Mayaro Virus Infection in Amazonia: A Multimodel Inference Approach to Risk Factor Assessment

    PubMed Central

    de Paula, Vanessa S.; Figueiredo, Luiz T. M.; Braga, Wornei S. M.; Luz, Sérgio L. B.

    2012-01-01

    Background Arboviral diseases are major global public health threats. Yet, our understanding of infection risk factors is, with a few exceptions, considerably limited. A crucial shortcoming is the widespread use of analytical methods generally not suited for observational data – particularly null hypothesis-testing (NHT) and step-wise regression (SWR). Using Mayaro virus (MAYV) as a case study, here we compare information theory-based multimodel inference (MMI) with conventional analyses for arboviral infection risk factor assessment. Methodology/Principal Findings A cross-sectional survey of anti-MAYV antibodies revealed 44% prevalence (n = 270 subjects) in a central Amazon rural settlement. NHT suggested that residents of village-like household clusters and those using closed toilet/latrines were at higher risk, while living in non-village-like areas, using bednets, and owning fowl, pigs or dogs were protective. The “minimum adequate” SWR model retained only residence area and bednet use. Using MMI, we identified relevant covariates, quantified their relative importance, and estimated effect-sizes (β±SE) on which to base inference. Residence area (βVillage = 2.93±0.41; βUpland = −0.56±0.33, βRiverbanks = −2.37±0.55) and bednet use (β = −0.95±0.28) were the most important factors, followed by crop-plot ownership (β = 0.39±0.22) and regular use of a closed toilet/latrine (β = 0.19±0.13); domestic animals had insignificant protective effects and were relatively unimportant. The SWR model ranked fifth among the 128 models in the final MMI set. Conclusions/Significance Our analyses illustrate how MMI can enhance inference on infection risk factors when compared with NHT or SWR. MMI indicates that forest crop-plot workers are likely exposed to typical MAYV cycles maintained by diurnal, forest dwelling vectors; however, MAYV might also be circulating in nocturnal, domestic-peridomestic cycles in village-like areas

  20. Rainwater and throughfall chemistry in a terra firme rain forest: Central Amazonia

    SciTech Connect

    Forti, M.C.; Moreira-Nordemann, L.M. )

    1991-04-20

    During the Global Tropospheric Experiment (GTE)-Amazon Boundary Layer Experiment (ABLE) 2B campaign in the Amazon basin, samples of rainwater and throughfall were obtained in a terra firme (nonflooded forest) rain forest at the Ducke Reserve (2{degree}57{prime}S, 59{degree}58{prime}W). The samples were collected during one wet period (April 1 to May 13, 1987) and one dry period (August 1 to October 1, 1987). All samples were analyzed for Na{sup +}, K{sup +}, Mg{sup 2+}, Ca{sup 2+}, NH{sub 4}{sup +}, Cl{sup {minus}} and SO{sub 4}{sup 2{minus}}, and pH. The rainwater was acidic, with a volume-weighted mean pH of 4.6 for two periods. Rainwater input from the dry period was 2 times greater for Na{sup +}, Mg{sup 2+}, NH{sub 4}{sup +}and SO{sub 4}{sup 2{minus}} and about 4 times greater for K{sup +} than from the wet period. The ionic concentrations in throughfall were higher than those in rainwater, except for NH{sub 4}{sup +} during the dry period. This enrichment of throughfall is attributed to the interaction of precipitation with the forest canopy.

  1. Historical Human Footprint on Modern Tree Species Composition in the Purus-Madeira Interfluve, Central Amazonia

    PubMed Central

    Levis, Carolina; de Souza, Priscila Figueira; Schietti, Juliana; Emilio, Thaise; Pinto, José Luiz Purri da Veiga; Clement, Charles R.; Costa, Flavia R. C.

    2012-01-01

    Background Native Amazonian populations managed forest resources in numerous ways, often creating oligarchic forests dominated by useful trees. The scale and spatial distribution of forest modification beyond pre-Columbian settlements is still unknown, although recent studies propose that human impact away from rivers was minimal. We tested the hypothesis that past human management of the useful tree community decreases with distance from rivers. Methodology/Principal Findings In six sites, we inventoried trees and palms with DBH≥10 cm and collected soil for charcoal analysis; we also mapped archaeological evidence around the sites. To quantify forest manipulation, we measured the relative abundance, richness and basal area of useful trees and palms. We found a strong negative exponential relationship between forest manipulation and distance to large rivers. Plots located from 10 to 20 km from a main river had 20–40% useful arboreal species, plots between 20 and 40 km had 12–23%, plots more than 40 km had less than 15%. Soil charcoal abundance was high in the two sites closest to secondary rivers, suggesting past agricultural practices. The shortest distance between archaeological evidence and plots was found in sites near rivers. Conclusions/Significance These results strongly suggest that past forest manipulation was not limited to the pre-Columbian settlements along major rivers, but extended over interfluvial areas considered to be primary forest today. The sustainable use of Amazonian forests will be most effective if it considers the degree of past landscape domestication, as human-modified landscapes concentrate useful plants for human sustainable use and management today. PMID:23185264

  2. Restriction limits and main drivers of fruit production in palm in central Amazonia

    NASA Astrophysics Data System (ADS)

    Freitas, Cintia; Costa, Flávia R. C.; Barbosa, Carlos Eduardo; Cintra, Renato

    2016-11-01

    Adult plants incapable of producing viable offspring inflate our perception of the size of population distribution. We propose that species occurrence is limited to a subset of the environmental gradient and that it changes as ontogenetic development progresses. Moreover, fruit production is associated with site-specific environmental conditions. We sampled 2988 adult individuals from nine palm species in 30 plots (40 × 250 m) and used a larger data set including 42 other plots distributed along a continuous topo-edaphic gradient in a terra firme forest near Manaus, Brazil. Five out of nine palm species were more restricted to a sub-section of the topo-edaphic gradient in the adult-size phase. More specifically, reproductive individuals of species Attalea attaleoides and A. microcarpa had even more restricted distributions than adult-sized, non-reproductive plants. Successive environmental filtering and competition probably acting through selective mortality led to increasing habitat restriction, with reproductive adults being restricted to a smaller part of the region than juveniles and adults. Water availability and nutrients limited both the ability to produce fruits and the amount of fruit production. Previous studies have reported stronger habitat associations for older plants than for seedlings or juveniles, but we show here that some species are more restricted at their reproductive stage. Plant specializations to local conditions may be more common than currently acknowledged, and a significant portion of individuals in a population might represent sinks. Such strong environmental limitations of reproductive plants should also be considered in management of species with economic value and in conservation planning.

  3. Temporal variation in black-caiman-nest predation in varzea of central Brazilian amazonia.

    PubMed

    Torralvo, Kelly; Botero-Arias, Robinson; Magnusson, William E

    2017-01-01

    On the Amazon floodplain, the main predators of black caiman (Melanosuchus niger) eggs are jaguars (Panthera onca), tegu lizards (Tupinambis teguixim), capuchin monkeys (Sapajus macrocephalus) and humans (Homo sapiens). In this study, we investigated the relationship between predator attacks on nests and incubation period, and evaluated the influence of initial predation on subsequent predation in the Mamirauá Sustainable Development Reserve. We also evaluated the influence of presence of females near the nests and manipulation of nests on the occurrence of attacks. We compared results from data obtained with camera traps and vestiges left by predators on estimates of rates of predation by different predators. Egg predation was recorded in 32% of the 658 black caiman nests monitored during two years. Our results suggest that the probability of predation on black caiman eggs is relatively constant throughout the incubation period and that predation on eggs was lower when adults, presumably females, were present. Careful opening of nests and handling of eggs did not increase the number of attacks on black caiman nests. Nest opening by a predator appeared to increase the chances of a subsequent attack because most of the attacks on nests occurred soon after a predator first opened the nest. However, attacks by another species of predator do not appear to be necessary to initiate attacks by any other species of predator. Results based on camera traps and vestiges differed, but use of vestiges was adequate for identifying the principal predators on eggs in black caiman nests and, in many circumstances, the vestiges may be better for estimating predation by humans. In this study, opening nests and handling eggs did not increase the number of attacks on black caiman nests.

  4. Impact of Anthropogenic Emissions on Isoprene Photochemical Oxidation Pathways in Central Amazonia

    NASA Astrophysics Data System (ADS)

    Thayer, M. P.; Dorris, M. R.; Keutsch, F. N.; Goldstein, A. H.; Guenther, A. B.; Isaacman-VanWertz, G. A.; Jimenez, J. L.; Kim, S.; Liu, Y.; Martin, S. T.; Palm, B. B.; Park, J. H.; Seco, R.; Sjostedt, S. J.; Springston, S. R.; Wernis, R. A.; Yee, L.

    2016-12-01

    The atmosphere over the Amazon rainforest is characterized by high concentrations of biogenic volatile organic compounds (BVOCs) - most notably isoprene, which is the most abundant non-methane VOC both locally and globally. These BVOCs are photochemically oxidized, forming oVOCs, especially via reaction with the hydroxyl radical (OH). This photochemical processing can result in formation of secondary pollutants such as ozone (O3) and secondary organic aerosol (SOA). During the Green Ocean Amazon campaign (GoAmazon2014/5), we obtained formaldehyde and glyoxal measurements together with OH, peroxy radicals (RO2+HO2), nitrogen oxides (NOx), CO, CO2, O3, (o)VOCs, and aerosol particle size distribution. Here we present data collected during 2014 at the T3 field site, 60 km to the west of Manaus, Brazil (3°12'47.82"S, 60°35'55.32"W). The T3 GoAmazon site varies between sampling strictly pristine (biogenic) emissions and influence from anthropogenic emissions from Manaus, depending on meteorological conditions. The day-to-day oscillation provides an ideal setting for evaluating the impact of pollution from biomass burning and urban emissions on VOC oxidation and resultant secondary pollutant production. Anthropogenic plumes contain not only additional VOC precursors, but also enhanced NOx, which drastically alters the relative importance of various isoprene oxidation pathways. We utilize a 0-D photochemical box model to examine how these factors impact reactivity and pollutant formation. Due to ongoing expansion of human influence and emissions in previously-pristine areas, understanding the sensitivity of biogenic oxidation to anthropogenic influence has significant impacts for tropospheric air quality, both in the rapidly-developing Amazon Basin and other BVOC-dominated regions.

  5. Behavioral modifications in northern bearded saki monkeys (Chiropotes satanas chiropotes) in forest fragments of central Amazonia.

    PubMed

    Boyle, Sarah Ann; Smith, Andrew T

    2010-01-01

    We investigated behavioral differences among seven groups of northern bearded saki monkeys (Chiropotes satanas chiropotes) living in five forest fragments and two areas of continuous forest at the Biological Dynamics of Forest Fragments Project study area, located approximately 80 km north of Manaus, Brazil. We collected data in six research cycles from July-August 2003 to January 2005-April 2006. When bearded saki monkeys were present in a study area, we followed the group from dawn until dusk for three consecutive days. Every 5 min, we conducted behavioral scans of all visible individuals. There was a positive relationship between forest size and group size, but animals in the small forest fragments lived at greater densities. Bearded saki monkeys in the smaller fragments spent more time resting, less time traveling, and less time vocalizing, but there was no relationship between forest size and the amount of time spent feeding. Our results indicate that the main behavioral differences among the groups are related to the amount of forest resources (e.g., fruit trees, space) available to the monkeys in the smaller fragments, as well as the resulting smaller group sizes. We stress the need to preserve large tracts of forest and provide connectivity between forest patches.

  6. Hepatitis D virus and hepatitis B virus infection in Amerindian communities of the Amazonas state, Colombia.

    PubMed

    di Filippo Villa, Diana; Cortes-Mancera, Fabian; Payares, Edra; Montes, Neyla; de la Hoz, Fernando; Arbelaez, Maria Patricia; Correa, Gonzalo; Navas, Maria-Cristina

    2015-10-24

    In Colombia, cases of Hepatitis D virus (HDV) infection have been officially described since 1985 mainly in Amerindian population from Sierra Nevada de Santa Marta (North Caribbean Coast), Uraba (North West), and Amazon (South East). The last official report of a clinical case of HDV infection in Colombia was registered in 2005. The aims of this study were to identify cases of HDV and/or Hepatitis B virus (HBV) infection in asymptomatic Amerindians from Amazonas state, South East Colombia, and to describe the circulating viral genotypes in this population. The study population was recruited in 19 Amerindian communities in the Amazonas state. Individuals over 18 years old were screened by rapid test for Hepatitis B surface Antigen (HBsAg). Blood samples obtained from individuals positives for HBsAg in the rapid-test assay were analyzed for HBsAg, anti-HBc, anti-HDV IgM/IgG by ELISA. The detection of HBV DNA and HDV RNA was performed by PCR amplification. The viral genotype was determined by sequencing and phylogenetic analysis. A total of 23/861 individuals were positive for HBsAg detection by rapid test. Serological and/or molecular markers of HDV infection were demonstrated in 43.5 % (10/23) of samples from Amerindians. The phylogenetic analysis demonstrated the exclusive circulation of HBV subgenotype F1b of and HDV 3 in this population. A high frequency of HBV/HDV infection was found in Amerindian population from Amazonas State, Colombia (43.5 %, 10/23). Nine cases were identified in a population of 861 asymptomatic Amerindian individuals; one symptomatic case (with diagnosis of end-stage hepatic disease) was also identified in the study. The circulation of HDV 3 and HBV subgenotype F1b suggests a constant flow of these viral genotypes as a result of the interaction of the Amerindian populations from Amazon basin. Further studies are necessary to confirm whether HBV subgenotype F1b is the prevalent in the population from South East region in Colombia.

  7. Edaphic and light conditions of sympatric plant morphotypes in western Amazonia.

    PubMed

    Roncal, Julissa

    2014-01-01

    Here I present a dataset of edaphic and light conditions associated with the occurrence of sympatric morphotypes of Geonomamacrostachys (Arecaceae/Palmae), a candidate case study from Amazonia hypothesized to have evolved under ecological speciation. Transects were established in three lowland rainforests in Peru, and the abundance of each local morphotype of this species was recorded in a total area of 4.95 hectares. Composite soil samples and hemispherical photographs were taken along the transects were the species occurred to obtain information on soil nutrients, soil texture, and indirect measurements of light availability. The raw and summary tables disclose the characteristics of each study site and habitats within them, which could be useful to soil scientists, ecologists, and conservationists engaged in similar research activities or meta-analyses in Amazonia.

  8. Edaphic and light conditions of sympatric plant morphotypes in western Amazonia

    PubMed Central

    2014-01-01

    Abstract Here I present a dataset of edaphic and light conditions associated with the occurrence of sympatric morphotypes of Geonoma macrostachys (Arecaceae/Palmae), a candidate case study from Amazonia hypothesized to have evolved under ecological speciation. Transects were established in three lowland rainforests in Peru, and the abundance of each local morphotype of this species was recorded in a total area of 4.95 hectares. Composite soil samples and hemispherical photographs were taken along the transects were the species occurred to obtain information on soil nutrients, soil texture, and indirect measurements of light availability. The raw and summary tables disclose the characteristics of each study site and habitats within them, which could be useful to soil scientists, ecologists, and conservationists engaged in similar research activities or meta-analyses in Amazonia. PMID:24891831

  9. Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity.

    PubMed

    Hoorn, C; Wesselingh, F P; ter Steege, H; Bermudez, M A; Mora, A; Sevink, J; Sanmartín, I; Sanchez-Meseguer, A; Anderson, C L; Figueiredo, J P; Jaramillo, C; Riff, D; Negri, F R; Hooghiemstra, H; Lundberg, J; Stadler, T; Särkinen, T; Antonelli, A

    2010-11-12

    The Amazonian rainforest is arguably the most species-rich terrestrial ecosystem in the world, yet the timing of the origin and evolutionary causes of this diversity are a matter of debate. We review the geologic and phylogenetic evidence from Amazonia and compare it with uplift records from the Andes. This uplift and its effect on regional climate fundamentally changed the Amazonian landscape by reconfiguring drainage patterns and creating a vast influx of sediments into the basin. On this "Andean" substrate, a region-wide edaphic mosaic developed that became extremely rich in species, particularly in Western Amazonia. We show that Andean uplift was crucial for the evolution of Amazonian landscapes and ecosystems, and that current biodiversity patterns are rooted deep in the pre-Quaternary.

  10. A new species of phlebotomine, Trichophoromyia adelsonsouzai (Diptera: Psychodidae) of Brazilian Amazonia

    PubMed Central

    dos Santos, Thiago Vasconcelos; da Silva, Fábio Márcio Medeiros; Barata, Iorlando da Rocha; de Andrade, Andrey José; Galati, Eunice Aparecida Bianchi

    2013-01-01

    The phlebotomine sandfly Trichophoromyia adelsonsouzai sp. nov. is described and illustrated based on the male and female morphological characteristics of specimens collected at Km 27 of the Trans-Amazonian Highway, municipality of Vitória do Xingu, state of Pará, Brazilian Amazonia. This is an area subject to the direct influence of Belo Monte hydroelectric system. With the description of this new species the number of Trichophoromyia sandflies recorded in Brazil is increased to 20. PMID:24141964

  11. A new species of phlebotomine, Trichophoromyia adelsonsouzai (Diptera: Psychodidae) of Brazilian Amazonia.

    PubMed

    Santos, Thiago Vasconcelos dos; Silva, Fábio Márcio Medeiros da; Barata, Iorlando da Rocha; Andrade, Andrey José de; Galati, Eunice Aparecida Bianchi

    2014-04-01

    The phlebotomine sandfly Trichophoromyia adelsonsouzai sp. nov. is described and illustrated based on the male and female morphological characteristics of specimens collected at Km 27 of the Trans-Amazonian Highway, municipality of Vitória do Xingu, state of Pará, Brazilian Amazonia. This is an area subject to the direct influence of Belo Monte hydroelectric system. With the description of this new species the number of Trichophoromyia sandflies recorded in Brazil is increased to 20.

  12. Campylobacter fetus Bacteremia in a Healthy Patient Returning from a Trip to the Ecuadorian Amazonia.

    PubMed

    Chávez, A C; Barrera, S; Leon, A; Trueba, G

    2016-12-27

    Campylobacter fetus is an opportunistic pathogen which causes bacteremia and other invasive infections in immunocompromised patients who have been exposed to livestock or ingested animal products (uncooked meat or unpasteurized milk). The present report describes a C. fetus infection in a healthy adult (immunocompetent) who returned from a visit to the Ecuadorian Amazonia and who did not report exposure to the typical sources of infection.

  13. IKONOS imagery for the Large Scale Biosphere–Atmosphere Experiment in Amazonia (LBA).

    Treesearch

    George Hurtt; Xiangming Xiao; Michael Keller; Michael Palace; Gregory P. Asner; Rob Braswell; Brond& #305; Eduardo S. zio; Manoel Cardoso; Claudio J.R. Carvalho; Matthew G. Fearon; Liane Guild; Steve Hagen; Scott Hetrick; Berrien Moore III; Carlos Nobre; Jane M. Read; S& aacute; Tatiana NO-VALUE; Annette Schloss; George Vourlitis; Albertus J. Wickel

    2003-01-01

    The LBA-ECO program is one of several international research components under the Brazilian-led Large Scale Biosphere–Atmosphere Experiment in Amazonia (LBA). The field-oriented research activities of this study are organized along transects and include a set of primary field sites, where the major objective is to study land-use change and ecosystem dynamics, and a...

  14. Fire, climate change and biodiversity in Amazonia: a Late-Holocene perspective.

    PubMed

    Bush, M B; Silman, M R; McMichael, C; Saatchi, S

    2008-05-27

    Fire is an important and arguably unnatural component of many wet Amazonian and Andean forest systems. Soil charcoal has been used to infer widespread human use of landscapes prior to European Conquest. An analysis of Amazonian soil carbon records reveals that the records have distinct spatial and temporal patterns, suggesting that either fires were only set in moderately seasonal areas of Amazonia or that strongly seasonal and aseasonal areas are undersampled. Synthesizing data from 300 charcoal records, an age-frequency diagram reveals peaks of fire apparently coinciding with some periods of very strong El Niño activity. However, the El Niño record does not always provide an accurate prediction of fire timing, and a better match is found in the record of insolation minima. After the time of European contact, fires became much scarcer within Amazonia. In both the Amazonia and the Andes, modern fire pattern is strongly allied to human activity. On the flank of the Andes, forests that have never burned are being eroded by fire spreading downslope from grasslands. Species of these same forests are being forced to migrate upslope due to warming and will encounter a firm artificial fire boundary of human activity.

  15. The influence of the land surface on the transition from dry to wet season in Amazonia

    NASA Astrophysics Data System (ADS)

    Fu, R.; Li, W.

    Analysis of the fifteen years of European Centre for Medium Range Weather Forecasts (ECMWF) reanalysis suggests that the transition from dry to wet season in Southern Amazonia is initially driven by increases of surface latent heat flux. These fluxes rapidly reduce Convective Inhibition Energy (CINE) and increase Convective Available Potential Energy (CAPE), consequently providing favourable conditions for increased rainfall even before the large-scale circulation has changed. The increase of rainfall presumably initiates the reversal of the cross-equatorial flow, leading to large-scale net moisture convergence over Southern Amazonia. An analysis of early and late wet season onsets on an interannual scale shows that a longer dry season with lower rainfall reduces surface latent heat flux in the dry and earlier transition periods compared to that of a normal wet season onset. These conditions result in a higher CINE and a lower CAPE, causing a delay in the increase of local rainfall in the initiating phase of the transition and consequently in the wet season onset. Conversely, a wetter dry season leads to a higher surface latent heat flux and weaker CINE, providing a necessary condition for an earlier increase of local rainfall and an earlier wet season onset. Our results imply that if land use change in Amazonia reduces rainfall during dry and transition seasons, it could significantly delay the wet season onset and prolong the dry season.

  16. Hydro-climate and ecological behaviour of the drought of Amazonia in 2005.

    PubMed

    Marengo, J A; Nobre, C A; Tomasella, J; Cardoso, M F; Oyama, M D

    2008-05-27

    In 2005, southwestern Amazonia experienced the effects of an intense drought that affected life and biodiversity. Several major tributaries as well as parts of the main river itself contained only a fraction of their normal volumes of water, and lakes were drying up. The consequences for local people, animals and the forest itself are impossible to estimate now, but they are likely to be serious. The analyses indicate that the drought was manifested as weak peak river season during autumn to winter as a consequence of a weak summertime season in southwestern Amazonia; the winter season was also accompanied by rainfall that sometimes reached 25% of the climatic value, being anomalously warm and dry and helping in the propagation of fires. Analyses of climatic and hydrological records in Amazonia suggest a broad consensus that the 2005 drought was linked not to El Niño as with most previous droughts in the Amazon, but to warming sea surface temperatures in the tropical North Atlantic Ocean.

  17. Forest productivity and water stress in Amazonia: observations from GOSAT chlorophyll fluorescence

    PubMed Central

    Lee, Jung-Eun; Frankenberg, Christian; van der Tol, Christiaan; Berry, Joseph A.; Guanter, Luis; Boyce, C. Kevin; Fisher, Joshua B.; Morrow, Eric; Worden, John R.; Asefi, Salvi; Badgley, Grayson; Saatchi, Sassan

    2013-01-01

    It is unclear to what extent seasonal water stress impacts on plant productivity over Amazonia. Using new Greenhouse gases Observing SATellite (GOSAT) satellite measurements of sun-induced chlorophyll fluorescence, we show that midday fluorescence varies with water availability, both of which decrease in the dry season over Amazonian regions with substantial dry season length, suggesting a parallel decrease in gross primary production (GPP). Using additional SeaWinds Scatterometer onboard QuikSCAT satellite measurements of canopy water content, we found a concomitant decrease in daily storage of canopy water content within branches and leaves during the dry season, supporting our conclusion. A large part (r2 = 0.75) of the variance in observed monthly midday fluorescence from GOSAT is explained by water stress over moderately stressed evergreen forests over Amazonia, which is reproduced by model simulations that include a full physiological representation of photosynthesis and fluorescence. The strong relationship between GOSAT and model fluorescence (r2 = 0.79) was obtained using a fixed leaf area index, indicating that GPP changes are more related to environmental conditions than chlorophyll contents. When the dry season extended to drought in 2010 over Amazonia, midday basin-wide GPP was reduced by 15 per cent compared with 2009. PMID:23760636

  18. Forest productivity and water stress in Amazonia: observations from GOSAT chlorophyll fluorescence.

    PubMed

    Lee, Jung-Eun; Frankenberg, Christian; van der Tol, Christiaan; Berry, Joseph A; Guanter, Luis; Boyce, C Kevin; Fisher, Joshua B; Morrow, Eric; Worden, John R; Asefi, Salvi; Badgley, Grayson; Saatchi, Sassan

    2013-06-22

    It is unclear to what extent seasonal water stress impacts on plant productivity over Amazonia. Using new Greenhouse gases Observing SATellite (GOSAT) satellite measurements of sun-induced chlorophyll fluorescence, we show that midday fluorescence varies with water availability, both of which decrease in the dry season over Amazonian regions with substantial dry season length, suggesting a parallel decrease in gross primary production (GPP). Using additional SeaWinds Scatterometer onboard QuikSCAT satellite measurements of canopy water content, we found a concomitant decrease in daily storage of canopy water content within branches and leaves during the dry season, supporting our conclusion. A large part (r(2) = 0.75) of the variance in observed monthly midday fluorescence from GOSAT is explained by water stress over moderately stressed evergreen forests over Amazonia, which is reproduced by model simulations that include a full physiological representation of photosynthesis and fluorescence. The strong relationship between GOSAT and model fluorescence (r(2) = 0.79) was obtained using a fixed leaf area index, indicating that GPP changes are more related to environmental conditions than chlorophyll contents. When the dry season extended to drought in 2010 over Amazonia, midday basin-wide GPP was reduced by 15 per cent compared with 2009.

  19. Seroprevalence of and risk factors for leptospirosis in the City of Manaus, State of Amazonas, Brazil.

    PubMed

    Silva, Luciete Almeida; Lima, Kátia Maria da Silva; Fernandes, Ormezinda Celeste Cristo; Balassiano, Ilana Teruszkin; Avelar, Kátia Eliane Santos; Jesus, Michele Silva de

    2016-01-01

    Leptospirosis is caused by a bacterium of the genus Leptospira. This study aimed at investigating the seroprevalence of and risk factors for leptospirosis in humans in Manaus, State of Amazonas. Interviews were performed, and 1,000 blood serum samples were examined using a microscopic agglutination test. Forty-three cases were positive; there were 10 serotypes, with coagglutination in 8 cases. The most frequently occurring serotypes were Icterohaemorrhagiae (20.7%), Cynopteri (20.7%), Australis (18.8%), and Copenhageni (16.9%), and the Midwest (54.7%) and South (23.8%) had the most cases; these areas lack basic sanitation. Disease occurrence might be reduced through improved basic infrastructural conditions.

  20. Hepatic hemosiderosis in red-spectacled Amazons (Amazona pretrei) and correlation with nutritional aspects.

    PubMed

    Pereira, Larissa Quinto; Strefezzi, Ricardo de Francisco; Catão-Dias, José Luiz; Trindade, Michele Martins; Fighera, Rafael Almeida; Kommers, Glaucia Denise; Lovato, Maristela

    2010-12-01

    Alimentary habits of free-living Psittaciformes vary significantly among different species. Amazona pretrei is under risk of extinction and has very specific free-living dietary habits, which are based on Paraná pine seeds. Hemosiderosis is a pathologic process characterized by intracellular accumulation of iron without other evident lesions. It is associated with increased prevalence of infections, neoplasms, and hepatopathies. The purpose of this study was to quantify hepatic hemosiderin deposits in captive A. pretrei and verify their association with nutritional parameters. Liver samples were processed for histopathology and stained with Prussian blue. The sections were analyzed by computerized morphometry to quantify the hepatic hemosiderin deposits. The hepatic hemosiderosis rates showed positive correlation with age and time in captivity. These results suggest that the menus and commercial rations for Psittacidae must be carefully revised.

  1. Biomass Burning Airborne and Spaceborne Experiment in the Amazonas (BASE-A)

    NASA Technical Reports Server (NTRS)

    Kaufman, Y. J.; Setzer, A.; Ward, D.; Tanre, D.; Holben, B. N.; Menzel, P.; Pereira, M. C.; Rasmussen, R.

    1992-01-01

    Results are presented on measurements of the trace gas and particulate matter emissions due to biomass burning during deforestation and grassland fires in South America, conducted as part of the Biomass Burning Airborne and Spaceborne Experiment in the Amazonas in September 1989. Field observations by an instrumented aircraft were used to estimate concentrations of O3, CO2, CO, CH4, and particulate matter. Fires were observed from satellite imagery, and the smoke optical thickness, particle size, and profiles of the extinction coefficient were measured from the aircraft and from the ground. Four smoke plumes were sampled, three vertical profiles were measured, and extensive ground measurements of smoke optical characteristics were carried out for different smoke types. The simultaneous measurements of the trace gases, smoke particles, and the distribution of fires were used to correlate biomass burning with the elevated levels of ozone.

  2. [Community-based organizations and the aids epidemic in Amazonas state, Brazil].

    PubMed

    Kadri, Michele Rocha; Schweickardt, Julio Cesar

    2015-05-01

    The scope of this paper was to analyze the perception of community-based organizations and their contributions to the history of tackling Aids in Amazonas State. It involved qualitative research with the use of oral and documental sources. Data were collected between June and September 2013 by means of semi-structured interviews with the leaders of eight organizations that work or worked with more vulnerable communities. Based on Discourse Analysis the conclusion drawn is that that the organizations perceive two distinct phases since the decentralization of funds from the Sexually-Transmitted Diseases Aids and Viral Hepatitis Department to the local leaders. The first phase was marked by the strengthening of organizations, collective empowerment and active political participation. The current phase has seen the distancing between organizations, a loss of political momentum and weakening of common response and organization.

  3. [Epidemiological and clinical aspects of snake bites in the municipalities of the state of Amazonas, Brazil].

    PubMed

    Campos Borges, C; Sadahiro, M; dos Santos, M C

    1999-01-01

    In the State of Amazonas, accidents with snakes are a public health problem. For this reasons, the objective of this work was to carry out a descriptive study of the snake accidents attended in the health units of 34 municipalities, one district and two border platoons in the State of Amazonas. The characteristics most commonly observed among those involved in snake accidents were: farmers (50. 4%), male (81.3%), belonging to the working age-group (72.1%), bitten on an upper limb (88.5%) by a "jararaca" (48.6%) or a "surucucu" (46.8%) in the rural part of the municipality (70.2%). The local signs and symptoms most frequently observed in those who received medical care more than 6 hours after the accident (57.3%) were edema (76.9%), pain (68.7%), erithema (10.2%) and hemorrhage (9. 3%). The systemic manifestation most frequently observed was hemorrhage (18.8%). Serotherapy was administered in only 65.9% of patients, the intravenous route being the route most commonly used to administer the antivenin (52.3%), while other non- recommended routes were widely used. In the majority of patients the antivenin given was antibotropic. The most frequent complications were: abscess 13.7%, necrosis 12.3%, secondary infection 8.3%, renal insufficiency 2.5% and gangrene 2.5%. The medical procedures most used in the treatment of these complications were drainage 52.6%, debridement 28.9%, amputation 10.5%, surgical cleaning 5.3% and peritoneal dialysis 2.6%. The fatality rate was 1%.

  4. Clinical and virological descriptive study in the 2011 outbreak of dengue in the Amazonas, Brazil.

    PubMed

    Martins, Valquiria do Carmo Alves; Bastos, Michele de Souza; Ramasawmy, Rajendranath; de Figueiredo, Regina Pinto; Gimaque, João Bosco Lima; Braga, Wornei Silva Miranda; Nogueira, Mauricio Lacerda; Nozawa, Sergio; Naveca, Felipe Gomes; Figueiredo, Luiz Tadeu Moraes; Mourão, Maria Paula Gomes

    2014-01-01

    Dengue is a vector-borne disease in the tropical and subtropical region of the world and is transmitted by the mosquito Aedes aegypti. In the state of Amazonas, Brazil during the 2011 outbreak of dengue all the four Dengue virus (DENV) serotypes circulating simultaneously were observed. The aim of the study was to describe the clinical epidemiology of dengue in Manaus, the capital city of the state of the Amazonas, where all the four DENV serotypes were co-circulating simultaneously. Patients with acute febrile illness during the 2011 outbreak of dengue, enrolled at the Fundação de Medicina Tropical Dr. Heitor Viera Dourado (FMT-HVD), a referral centre for tropical and infectious diseases in Manaus, were invited to participate in a clinical and virological descriptive study. Sera from 677 patients were analyzed by RT-nested-PCRs for flaviviruses (DENV 1-4, Saint Louis encephalitis virus-SLEV, Bussuquara virus-BSQV and Ilheus virus-ILHV), alphavirus (Mayaro virus-MAYV) and orthobunyavirus (Oropouche virus-OROV). Only dengue viruses were detected in 260 patients (38.4%). Thirteen patients were co-infected with more than one DENV serotype and six (46.1%) of them had a more severe clinical presentation of the disease. Nucleotide sequencing showed that DENV-1 belonged to genotype V, DENV-2 to the Asian/American genotype, DENV-3 to genotype III and DENV-4 to genotype II. Co-infection with more than one DENV serotype was observed. This finding should be warning signs to health authorities in situations of the large dispersal of serotypes that are occurring in the world.

  5. Species diversity of edaphic mites (Acari: Oribatida) and effects of topography, soil properties and litter gradients on their qualitative and quantitative composition in 64 km² of forest in Amazonia.

    PubMed

    de Moraes, Jamile; Franklin, Elizabeth; de Morais, José Wellington; de Souza, Jorge Luiz Pereira

    2011-09-01

    Small-scale spatial distribution of oribatid mites has been investigated in Amazonia. In addition, medium- and large-scale studies are needed to establish the utility of these mites in detecting natural environmental variability, and to distinguish this variability from anthropogenic impacts. We are expanding the knowledge about oribatid mites in a wet upland forest reserve, and investigate whether a standardized and integrated protocol is an efficient way to assess the effects of environmental variables on their qualitative and quantitative composition on a large spatial scale inside an ecological reserve in Central Amazonia, Brazil. Samples for Berlese-Tullgren extraction were taken in 72 plots of 250 × 6 m distributed over 64 km(2). In total 3,182 adult individuals, from 82 species and 79 morphospecies were recorded, expanding the number of species known in the reserve from 149 to 254. Galumna, Rostrozetes and Scheloribates were the most speciose genera, and 57 species were rare. Rostrozetes ovulum, Pergalumna passimpuctata and Archegozetes longisetosus were the most abundant species, and the first two were the most frequent. Species number and abundance were not correlated with clay content, slope, pH and litter quantity. However, Principal Coordinate Analysis indicated that as the percentage of clay content, litter quantity and pH changed, the oribatid mite qualitative and quantitative composition also changed. The standardized protocol effectively captured the diversity, as we collected one of the largest registers of oribatid mites' species for Amazonia. Moreover, biological and ecological data were integrated to capture the effects of environmental variables accounting for their diversity and abundance.

  6. Snakebites as a largely neglected problem in the Brazilian Amazon: highlights of the epidemiological trends in the State of Amazonas.

    PubMed

    Feitosa, Esaú Samuel; Sampaio, Vanderson; Sachett, Jaqueline; Castro, Daniel Barros de; Noronha, Maria das Dores Nogueira; Lozano, Jorge Luis López; Muniz, Emiro; Ferreira, Luiz Carlos de Lima; Lacerda, Marcus Vinícius Guimarães de; Monteiro, Wuelton Marcelo

    2015-01-01

    Envenoming snakebites are thought to be a particularly important threat to public health worldwide, especially in rural areas of tropical and subtropical countries. The true magnitude of the public health threat posed by snakebites is unknown, making it difficult for public health officials to optimize prevention and treatment. The objective of this work was to conduct a systematic review of the literature to gather data on snakebite epidemiology in the Amazon region and describe a case series of snakebites from epidemiological surveillance in the State of Amazonas (1974-2012). Only 11 articles regarding snakebites were found. In the State of Amazonas, information regarding incidents involving snakes is scarce. Historical trends show an increasing number of cases after the second half of the 1980s. Snakebites predominated among adults (20-39 years old; 38%), in the male gender (78.9%) and in those living in rural areas (85.6%). The predominant snake envenomation type was bothropic. The incidence reported by the epidemiological surveillance in the State of Amazonas, reaching up to 200 cases/100,000 inhabitants in some areas, is among the highest annual snakebite incidence rates of any region in the world. The majority of the cases were reported in the rainy season with a case-fatality rate of 0.6%. Snakebite envenomation is a great disease burden in the State of Amazonas, representing a challenge for future investigations, including approaches to estimating incidence under-notification and case-fatality rates as well as the factors related to severity and disabilities.

  7. Chemotherapeutic Studies on Schistosomiasis and Clinical Epidemiological and Immunological Studies on Malaria in Amazonas, Brazil, along the Ituxi River.

    DTIC Science & Technology

    1981-09-01

    fi76 341 CHEMOTHERAPEUTIC STUDIES ON SCHISTOSONIRSIS AND 1/1 CLINICAL EPIDENIOLOGICAL A.. (U) BRASILIA UNIV ( BRAZIL ) A R PRATA ET AL SEP 81 DAMDi7...Fort Derick, Frederick, Maryland 21701-5012 Grant No. DAMDl7-80-G-9479 University of Brasilia Brasilia, D.F., Brazil Approved for public release...ON SCHISTOSOMIASIS AND Annual/Final CLINICAL, EPIDEMIOLOGICAL AND IMMUNOLOGICAL Oct 80-Sep 81 STUDTES ON MALAIA IN AMAZONAS, BRAZIL , ALONG THE 6

  8. There's no place like home: seedling mortality contributes to the habitat specialisation of tree species across Amazonia.

    PubMed

    Fortunel, Claire; Paine, C E Timothy; Fine, Paul V A; Mesones, Italo; Goret, Jean-Yves; Burban, Benoit; Cazal, Jocelyn; Baraloto, Christopher

    2016-10-01

    Understanding the mechanisms generating species distributions remains a challenge, especially in hyperdiverse tropical forests. We evaluated the role of rainfall variation, soil gradients and herbivory on seedling mortality, and how variation in seedling performance along these gradients contributes to habitat specialisation. In a 4-year experiment, replicated at the two extremes of the Amazon basin, we reciprocally transplanted 4638 tree seedlings of 41 habitat-specialist species from seven phylogenetic lineages among the three most important forest habitats of lowland Amazonia. Rainfall variation, flooding and soil gradients strongly influenced seedling mortality, whereas herbivory had negligible impact. Seedling mortality varied strongly among habitats, consistent with predictions for habitat specialists in most lineages. This suggests that seedling performance is a primary determinant of the habitat associations of adult trees across Amazonia. It further suggests that tree diversity, currently mostly harboured in terra firme forests, may be strongly impacted by the predicted climate changes in Amazonia.

  9. High diversity of tropical peatland ecosystem types in the Pastaza-Marañón basin, Peruvian Amazonia

    NASA Astrophysics Data System (ADS)

    LäHteenoja, Outi; Page, Susan

    2011-06-01

    Very little information exists on Amazonian peatlands with most studies on tropical peatlands concentrating on Southeast Asia. Here we describe diversity of Amazonian peatland ecosystems and consider its implications for the global diversity of tropical peatland ecosystems. Nine study sites were selected from within the most extensive wetland area of Peruvian Amazonia: the 120,000 km2 Pastaza-Marañón basin. Peat thickness was determined every 500 m from the edge toward the center of each site, and peat samples were collected from two cores per site. Samples from the entire central core and surface samples from the other core were analyzed for nutrient content. Topography of four peat deposits was measured. In order to study differences in vegetation, pixel values were extracted from a satellite image. The surface peat nutrient content of the peatlands varied from very nutrient-rich to nutrient-poor. Two of the peatlands measured for their topography were domed (5.4 and 5.8 m above the stream), one was gently sloping (1.4 m above the stream), and one was flat and occurred behind a 7 m high levee. Five different peatland vegetation types were detected on the basis of pixel values derived from the satellite image. The peat cores had considerable variation in nutrient content and showed different developmental pathways. In summary, the Pastaza-Marañón basin harbors a considerable diversity of previously undescribed peatland ecosystems, representing a gradient from atmosphere-influenced, nutrient-poor ombrotrophic bogs through to river-influenced, nutrient-rich swamps. Their existence affects the habitat diversity, carbon dynamics, and hydrology of the Amazonian lowlands, and they also provide an undisturbed analog for the heavily disturbed peatlands of Southeast Asia. Considering the factors threatening the Amazonian lowlands, there is an urgent need to investigate and conserve these peatland ecosystems, which may in the near future be among the very few

  10. Amazonia Introduced to General Relativity: The May 29, 1919, Solar Eclipse from a North-Brazilian Point of View

    NASA Astrophysics Data System (ADS)

    Crispino, Luís C. B.; de Lima, Marcelo C.

    2016-12-01

    In 1919, A. C. D. Crommelin and C. R. Davidson, British astronomers from the Greenwich Observatory in England, passed by Amazonia on their Brazilian journey aiming to measure the bending of stars' light rays during the total solar eclipse of May 29, 1919, and thereby put the theory of general relativity to the test. In the context of Crommelin's and Davidson's visit, we discuss how Amazonia was introduced to Einstein's theory of gravitation, and also the observations and repercussions of the May 29, 1919, solar eclipse in Belém, capital city of the North-Brazilian Pará state.

  11. Habitat distribution for non-native Amazona viridigenalis within San Diego County using Maxent predictive model

    NASA Astrophysics Data System (ADS)

    Meseck, Kristin April

    Human propagated changes to the environment have adversely affected certain species while advantaging other species. Psittacines, or species that fall within the parrot family, have been found to be well adapted to modified environments. Over time, transportation of various parrot species for use in the exotic pet trade has caused accidental releases of individual parrots, resulting in species groups forming and colonizing in new, non-native environments, specifically urban and suburban ones. Amazona viridigenalis, the Red-crowned parrot, is a species that has adapted to living in several regions within the United States including Texas, Florida, and California. This species is endangered within its native range in the lowlands of eastern Mexico, yet has the largest population of any other psittacine species in California. Despite this interesting dichotomy this species remains severely understudied in its new range. Using geographic information systems and Maxent predictive model, this research aims to achieve a greater understanding of the extent of habitat suitable to the Amazona viridigenalis within San Diego County and the habitat variables that enable its establishment success. Presence locations where individuals of the species were using habitat were collected along with 12 important variables that represent Red-crowned parrot habitat elements. These were used in the creation of a predictive habitat model utilizing Maxent machine-learning technique. Three models were created using three different background extents from which the pseudo-absence points were generated. These models were tested for statistical significance and predictive accuracy. It was found that model performance significantly decreased with a decrease in size of model extent. The largest extent was chosen to model habitat using the five variables that were found to be the least correlated, achieved the most gain, and had the most explanatory power for the earlier models. The final model

  12. Environmental impact of geometric earthwork construction in pre-Columbian Amazonia.

    PubMed

    Carson, John Francis; Whitney, Bronwen S; Mayle, Francis E; Iriarte, José; Prümers, Heiko; Soto, J Daniel; Watling, Jennifer

    2014-07-22

    There is considerable controversy over whether pre-Columbian (pre-A.D. 1492) Amazonia was largely "pristine" and sparsely populated by slash-and-burn agriculturists, or instead a densely populated, domesticated landscape, heavily altered by extensive deforestation and anthropogenic burning. The discovery of hundreds of large geometric earthworks beneath intact rainforest across southern Amazonia challenges its status as a pristine landscape, and has been assumed to indicate extensive pre-Columbian deforestation by large populations. We tested these assumptions using coupled local- and regional-scale paleoecological records to reconstruct land use on an earthwork site in northeast Bolivia within the context of regional, climate-driven biome changes. This approach revealed evidence for an alternative scenario of Amazonian land use, which did not necessitate labor-intensive rainforest clearance for earthwork construction. Instead, we show that the inhabitants exploited a naturally open savanna landscape that they maintained around their settlement despite the climatically driven rainforest expansion that began ∼2,000 y ago across the region. Earthwork construction and agriculture on terra firme landscapes currently occupied by the seasonal rainforests of southern Amazonia may therefore not have necessitated large-scale deforestation using stone tools. This finding implies far less labor--and potentially lower population density--than previously supposed. Our findings demonstrate that current debates over the magnitude and nature of pre-Columbian Amazonian land use, and its impact on global biogeochemical cycling, are potentially flawed because they do not consider this land use in the context of climate-driven forest-savanna biome shifts through the mid-to-late Holocene.

  13. Environmental impact of geometric earthwork construction in pre-Columbian Amazonia

    PubMed Central

    Carson, John Francis; Whitney, Bronwen S.; Mayle, Francis E.; Iriarte, José; Prümers, Heiko; Soto, J. Daniel; Watling, Jennifer

    2014-01-01

    There is considerable controversy over whether pre-Columbian (pre-A.D. 1492) Amazonia was largely “pristine” and sparsely populated by slash-and-burn agriculturists, or instead a densely populated, domesticated landscape, heavily altered by extensive deforestation and anthropogenic burning. The discovery of hundreds of large geometric earthworks beneath intact rainforest across southern Amazonia challenges its status as a pristine landscape, and has been assumed to indicate extensive pre-Columbian deforestation by large populations. We tested these assumptions using coupled local- and regional-scale paleoecological records to reconstruct land use on an earthwork site in northeast Bolivia within the context of regional, climate-driven biome changes. This approach revealed evidence for an alternative scenario of Amazonian land use, which did not necessitate labor-intensive rainforest clearance for earthwork construction. Instead, we show that the inhabitants exploited a naturally open savanna landscape that they maintained around their settlement despite the climatically driven rainforest expansion that began ∼2,000 y ago across the region. Earthwork construction and agriculture on terra firme landscapes currently occupied by the seasonal rainforests of southern Amazonia may therefore not have necessitated large-scale deforestation using stone tools. This finding implies far less labor—and potentially lower population density—than previously supposed. Our findings demonstrate that current debates over the magnitude and nature of pre-Columbian Amazonian land use, and its impact on global biogeochemical cycling, are potentially flawed because they do not consider this land use in the context of climate-driven forest–savanna biome shifts through the mid-to-late Holocene. PMID:25002502

  14. Pre-Columbian agricultural landscapes, ecosystem engineers, and self-organized patchiness in Amazonia

    PubMed Central

    McKey, Doyle; Rostain, Stéphen; Iriarte, José; Glaser, Bruno; Birk, Jago Jonathan; Holst, Irene; Renard, Delphine

    2010-01-01

    The scale and nature of pre-Columbian human impacts in Amazonia are currently hotly debated. Whereas pre-Columbian people dramatically changed the distribution and abundance of species and habitats in some parts of Amazonia, their impact in other parts is less clear. Pioneer research asked whether their effects reached even further, changing how ecosystems function, but few in-depth studies have examined mechanisms underpinning the resilience of these modifications. Combining archeology, archeobotany, paleoecology, soil science, ecology, and aerial imagery, we show that pre-Columbian farmers of the Guianas coast constructed large raised-field complexes, growing on them crops including maize, manioc, and squash. Farmers created physical and biogeochemical heterogeneity in flat, marshy environments by constructing raised fields. When these fields were later abandoned, the mosaic of well-drained islands in the flooded matrix set in motion self-organizing processes driven by ecosystem engineers (ants, termites, earthworms, and woody plants) that occur preferentially on abandoned raised fields. Today, feedbacks generated by these ecosystem engineers maintain the human-initiated concentration of resources in these structures. Engineer organisms transport materials to abandoned raised fields and modify the structure and composition of their soils, reducing erodibility. The profound alteration of ecosystem functioning in these landscapes coconstructed by humans and nature has important implications for understanding Amazonian history and biodiversity. Furthermore, these landscapes show how sustainability of food-production systems can be enhanced by engineering into them fallows that maintain ecosystem services and biodiversity. Like anthropogenic dark earths in forested Amazonia, these self-organizing ecosystems illustrate the ecological complexity of the legacy of pre-Columbian land use. PMID:20385814

  15. The Miocene Cyprideis species flock (Ostracoda; Crustacea) of western Amazonia (Solimões Formation)

    NASA Astrophysics Data System (ADS)

    Gross, Martin; Ramos, Maria Ines F.; Piller, Werner E.

    2015-04-01

    The Miocene mega-wetland of western Amazonia holds a diverse, largely endemic aquatic invertebrate fauna (e.g., molluscs, ostracods). Among ostracods, the genus Cyprideis experienced a remarkable radiation. Micropalaeontologic investigations of a 400-m-long sediment core (~62 km SW Benjamin Constant, Amazonia, Brazil) permitted a taxonomic revision of about two-thirds of hitherto described Cyprideis species. Ostracod index species enabled a biostratigraphic allocation of the well succession to the Cyprideis minipunctata to Cyprideis cyrtoma biozones (late middle to early late Miocene age). The current study underlines once more Cyprideis' remarkable capability to produce species flocks and western Amazonian Cyprideis comply with the criteria of a species flock: i) endemicity: up to now not a single species is recorded in adjacent areas; ii) monophyly: although hardly verifiable to date and probably Amazonian Cyprideis is not monophyletic s.str., several closely related, quite rapidly evolving species are proved; iii) speciosity: due to the present study, 30 formally described species exist; several further species, left in open nomenclature, are recorded in the literature, which strongly hints to a much higher, still unrecorded species richness; iv) ecological diversity: based on rare sedimentologic cross-references, ecological diversity within a highly structured wetland is possible; the current results demonstrate the sympatric occurrence of up to 12 Cyprideis species, which may indicate adaptations to different microhabitats; v) habitat dominance: regularly Cyprideis holds more than >90 % in western Amazonian ostracod assemblages during the early and middle Miocene. Explanations for this extreme habitat monopolisation are still arguable and touch the highly disputed question about the nature of western Amazonia's environments during the Miocene. It seems, however, evident that a strictly actualistic approach to endemic Neogene Amazonian biota is highly

  16. Pre-Columbian agricultural landscapes, ecosystem engineers, and self-organized patchiness in Amazonia.

    PubMed

    McKey, Doyle; Rostain, Stéphen; Iriarte, José; Glaser, Bruno; Birk, Jago Jonathan; Holst, Irene; Renard, Delphine

    2010-04-27

    The scale and nature of pre-Columbian human impacts in Amazonia are currently hotly debated. Whereas pre-Columbian people dramatically changed the distribution and abundance of species and habitats in some parts of Amazonia, their impact in other parts is less clear. Pioneer research asked whether their effects reached even further, changing how ecosystems function, but few in-depth studies have examined mechanisms underpinning the resilience of these modifications. Combining archeology, archeobotany, paleoecology, soil science, ecology, and aerial imagery, we show that pre-Columbian farmers of the Guianas coast constructed large raised-field complexes, growing on them crops including maize, manioc, and squash. Farmers created physical and biogeochemical heterogeneity in flat, marshy environments by constructing raised fields. When these fields were later abandoned, the mosaic of well-drained islands in the flooded matrix set in motion self-organizing processes driven by ecosystem engineers (ants, termites, earthworms, and woody plants) that occur preferentially on abandoned raised fields. Today, feedbacks generated by these ecosystem engineers maintain the human-initiated concentration of resources in these structures. Engineer organisms transport materials to abandoned raised fields and modify the structure and composition of their soils, reducing erodibility. The profound alteration of ecosystem functioning in these landscapes coconstructed by humans and nature has important implications for understanding Amazonian history and biodiversity. Furthermore, these landscapes show how sustainability of food-production systems can be enhanced by engineering into them follows that maintain ecosystem services and biodiversity. Like anthropogenic dark earths in forested Amazonia, these self-organizing ecosystems illustrate the ecological complexity of the legacy of pre-Columbian land use.

  17. New species and geographical records of dactylogyrids (Monogenea) of catfish (Siluriformes) from the Peruvian Amazonia.

    PubMed

    Mendoza-Palmero, Carlos A; Scholz, Tomáš; Mendoza-Franco, Edgar F; Kuchta, Roman

    2012-06-01

    Three new species of gill monogeneans (Dactylogyridae: Ancyrocephalinae) are described from siluriform catfish from Iquitos, Peru: Demidospermus mortenthaleri n. sp. from Brachyplatystoma juruense (Boulenger), Demidospermus brevicirrus n. sp. from Pimelodus sp., and Aphanoblastella aurorae n. sp. from Goeldiella eques (Müller & Troschel). Demidospermus mortenthaleri is characterized by a male copulatory organ (MCO) with a small loop at its middle portion; 2 types of hooks, of which pairs 5 and 6 are longer than the remaining hooks; a proximal subunit round and highly depressed thumb; and a sclerotized vagina with a round pad at the vaginal aperture. Demidospermus brevicirrus is distinguished from other congeners by the presence of a short, straight, and robust MCO and boot-shaped accessory piece with a hooked projection directed posteriorly. Aphanoblastella aurorae is the only species of the genus that possesses an arrow-shaped sclerotized vagina and a medial process on the dorsal bar. Another 6 dactylogyrids described previously are recorded for the first time from the Peruvian Amazonia: Cosmetocleithrum bulbocirrus Kritsky, Thatcher and Boeger, 1986 ; Vancleaveus fungulus Kritsky, Thatcher and Boeger, 1986 ; V. janauacaensis Kritsky, Thatcher and Boeger, 1986 ; V. platyrhynchi Kritsky, Thatcher and Boeger, 1986 ; Unilatus unilatus Mizelle and Kritsky, 1967 ; and U. brittani Mizelle, Kritsky and Crane, 1968 . Based on observations of specimens collected in the Peruvian Amazonia, new morphological data for these species are provided. Comparison of new specimens of U. unilatus and U. brittani with those of Unilatus brevispinus Suriano, 1985 and Unilatus longispinus Suriano, 1985 , both originally described from Brazil, has shown that they are conspecific. Therefore, the latter species were synonymized with U. unilatus and U. brittani , respectively. In addition, 56 undescribed monogeneans found in catfish from the Peruvian Amazonia, some of them probably belonging

  18. N2O Emissions in Southeastern Amazonia: The Effect of Agricultural Intensification

    NASA Astrophysics Data System (ADS)

    O'Connell, C.; Brando, P. M.; Cerri, C. E.; Coe, M. T.; Davidson, E. A.; Galford, G. L.; Macedo, M.; Neill, C.; Venterea, R. T.

    2014-12-01

    The Amazon is not only an exceptionally biodiverse and carbon-rich tract of tropical forest, it is also a case study in land use change. Over the last 30 years, Amazonia has been home to extraordinary growth in agricultural production, in part from agricultural expansion, but also due to more intense management on Amazonia's existing croplands. We use a year-long campaign and approximately 500 field chamber measurements to estimate how cropland intensification in Mato Grosso, Brazil affects the emission of nitrous oxide (N2O) and soil N dynamics. In this system, soybean cropland intensification occurs when double cropping is introduced, in which maize is planted directly after soybean harvest and fertilized twice with inorganic N. We find that dry season N2O emissions in single-cropped (soybean only) fields, double-cropped (soybean/maize) fields and reference tropical forest are uniformly near zero, or ~0-0.5 ngN/cm^2/hr. Surprisingly, wet season emissions rates remain low as well, between 1-4 ngN/cm^2/hr, for both cropland types and reference forest. By contrast, isolated post-fertilization spikes in N2O emissions are large, with a maximum increase of ~800% and a mean increase of ~400%, though these flux increases resolve rapidly and rates return to their low baseline within days. Finally, we explore the role that soil moisture, soil N availability, and soil C availability play in regulating N2O fluxes in reference forest, soybean fields and intensified soybean-maize fields. Open questions surround how the Amazon's land resources can be leveraged to increase agricultural production at the least harm to the environment. Here, we quantify the consequences of land use change on N2O, a powerful greenhouse gas, in a critical ecosystem undergoing novel agricultural intensification. These results may inform both greenhouse gas accounting and our understanding of the effects of Amazonia's changing agricultural landscape on the nitrogen cycle.

  19. Visible and infrared spin scan radiometer atmospheric sounder water vapor and wind fields over Amazonia

    SciTech Connect

    Schmit, T.J.; Brueske, K.F.; Smith, W.L. ); Menzel, W.P. )

    1990-09-20

    Both the mass and motion fields for Amazonia have been depicted using almost exclusively geostationary satellite data. Derived parameters include satellite retrievals of atmospheric temperature and dewpoint temperature, total precipitable water vapor, and cloud and water vapor winds. The capabilities of geostationary satellite data have been demonstrated at least four times a day for the period of May 5-8, 1987, during the Global Tropospheric Experiment/Amazon Boundary Layer Experiment. The satellite-derived information is able to resolve synoptic-scale atmospheric trends in space and time.

  20. The Flux of Carbon from Selective Logging, Fire, and Regrowth in Amazonia

    NASA Technical Reports Server (NTRS)

    Houghton, R. A.

    2004-01-01

    The major goal of this work was to develop a spatial, process-based model (CARLUC) that would calculate sources and sinks of carbon from changes in land use, including logging and fire. The work also included Landsat data, together with fieldwork, to investigate fire and logging in three different forest types within Brazilian Amazonia. Results from these three activities (modeling, fieldwork, and remote sensing) are described, individually, below. The work and some of the personnel overlapped with research carried out by Dr. Daniel Nepstad's LBA team, and thus some of the findings are also reported in his summaries.

  1. Amber from western Amazonia reveals Neotropical diversity during the middle Miocene

    PubMed Central

    Antoine, Pierre-Olivier; De Franceschi, Dario; Flynn, John J.; Nel, André; Baby, Patrice; Benammi, Mouloud; Calderón, Ysabel; Espurt, Nicolas; Goswami, Anjali; Salas-Gismondi, Rodolfo

    2006-01-01

    Tertiary insects and arachnids have been virtually unknown from the vast western Amazonian basin. We report here the discovery of amber from this region containing a diverse fossil arthropod fauna (13 hexapod families and 3 arachnid species) and abundant microfossil inclusions (pollen, spores, algae, and cyanophyceae). This unique fossil assemblage, recovered from middle Miocene deposits of northeastern Peru, greatly increases the known diversity of Cenozoic tropical–equatorial arthropods and microorganisms and provides insights into the biogeography and evolutionary history of modern Neotropical biota. It also strengthens evidence for the presence of more modern, high-diversity tropical rainforest ecosystems during the middle Miocene in western Amazonia. PMID:16950875

  2. New species of Lachesilla Westwood in the pedicularia group (Psocodea: 'Psocoptera': Lachesillidae) from the Colombian Amazonia.

    PubMed

    Manchola, Oscar Fernando Saenz; Aldrete, Alfonso Neri García; Obando, Ranulfo González

    2015-02-05

    Two species of Lachesilla, in the pedicularia species group, from the Colombian Amazonia, are here described and illustrated. Also, a record of L. asymmetriproctus García Aldrete, for the Colombian Department of Putumayo is provided. An identification key to Lachesilla species in the pedicularia group with a single male clunial apophysis is presented, together with a diagnosis of this assemblage of species. A table is included indicating the distribution of Lachesilla species with one and two male clunial apophyses. The species treated in this paper constitute the first lachesillids known from the Department of Putumayo, Colombia. 

  3. Amber from western Amazonia reveals Neotropical diversity during the middle Miocene.

    PubMed

    Antoine, Pierre-Olivier; De Franceschi, Dario; Flynn, John J; Nel, André; Baby, Patrice; Benammi, Mouloud; Calderón, Ysabel; Espurt, Nicolas; Goswami, Anjali; Salas-Gismondi, Rodolfo

    2006-09-12

    Tertiary insects and arachnids have been virtually unknown from the vast western Amazonian basin. We report here the discovery of amber from this region containing a diverse fossil arthropod fauna (13 hexapod families and 3 arachnid species) and abundant microfossil inclusions (pollen, spores, algae, and cyanophyceae). This unique fossil assemblage, recovered from middle Miocene deposits of northeastern Peru, greatly increases the known diversity of Cenozoic tropical-equatorial arthropods and microorganisms and provides insights into the biogeography and evolutionary history of modern Neotropical biota. It also strengthens evidence for the presence of more modern, high-diversity tropical rainforest ecosystems during the middle Miocene in western Amazonia.

  4. Reduced deep soil water uptake through forest conversion to pasture in Amazonia

    SciTech Connect

    Jipp, P.H.; Nepstad, D.C. Woods Hole Research Center, MA )

    1993-06-01

    Forests of eastern Amazonia are being replaced by pastures and secondary forests. We measured soil water storage and flux in adjacent forest and pasture ecosystems using Time Domain Reflectometry sensors installed in the walls of deep (9-m) shafts. The forest withdrew 597+/-25 mm of soil water stored below 1 m depth during the 1991 dry season (Jun-Dec), 1.7 times more than the pasture. Uptake from the bottom of the forest soil profile continued even after rainfall resumed in early 1992. The hydrologic impacts of tropical deforestation may be most severe for evergreen forests with deep rooting zones in areas of seasonal drought.

  5. Isolation of yellow fever virus from nulliparous Haemagogus (Haemagogus) janthinomys in eastern Amazonia.

    PubMed

    Mondet, B; Vasconcelos, P F C; Travassos da Rosa, A P A; Travassos da Rosa, E S; Rodrigues, S G; Travassos Rosa, J F S; Bicout, D J

    2002-01-01

    In 1998, an epizootic of yellow fever (YF) killed many howler monkeys (Alouatta spp.) in eastern Amazonia near the city of Altamira. An infection level with YF virus of approximately 3.6% was determined from analysis of 456 females of Haemagogus janthinomys Dyar, the main enzootic YF vector in South America. One month later, a second study of 164 females captured in the same place led to infection levels of 0.8% for parous and 2.9% for nulliparous females. These results lead to the conclusion that vertical transmission, one of the key elements in the epidemiology of YF, occurs in South America as it does in Africa.

  6. Vegetation and climate changes in western Amazonia during a previous Interglacial- Glacial transition

    NASA Astrophysics Data System (ADS)

    Cardenas, M. L.; Gosling, W. D.; Sherlock, S. C.; Poole, I.; Pennington, R. T.

    2009-12-01

    Amazonia is one of the most biodiverse areas of the world and its vegetation plays a crucial role in controlling the global climate through the regulation of the levels of atmospheric CO2. However, Amazonian ecosystems and their role in the climate system are threatened by ongoing the human impact (already estimated loss of 60% of the species in western Amazonia) and predicted climate change (+1.1-6.4oC by 2100). Unfortunately, there is absence of data relating to the ecological baseline function and response to global climate change of western Amazonian ecosystems in the absence of humans. To help anticipate the impact of future climate change predictions an improved understanding of the natural responses of tropical vegetation to known past climate change is required. Here we present the first study that shows the response of pristine tropical ecosystems in western Amazonia biodiversity hotspot to a major global climate change event (a Quaternary Interglacial-Glacial transition). Pleistocene lake/swamp sediments preserved at the Erazo study site (Lat. 00o 33’S, Long. 077o 52’W, 1927m alt.) today within tropical cloud forest vegetation provide a unique opportunity to examine the impact of past climate shifts. The sediment are >40,000 years old (radiocarbon infinite) and younger than 1 million years (presence of Alder biomarker) and consist of organic layers interbedded with volcanic ash (tephra). This study presents data from multiple proxies (fossil pollen, wood macrofossils and charcoal) to establish a comprehensive picture of regional and local vegetation change prior to human arrival. Our data show a change of vegetation from palm-dominated forest indicative of warm and wet conditions similar to the present at the base of this record, to a forest dominated by Podocarpus sp. suggesting cold and wet conditions at the top of the record. The transition between these two vegetation communities appears to be progressive with small sharp changes along the

  7. Optical and geometrical properties of cirrus clouds in Amazonia derived from 1 year of ground-based lidar measurements

    NASA Astrophysics Data System (ADS)

    Gouveia, Diego A.; Barja, Boris; Barbosa, Henrique M. J.; Seifert, Patric; Baars, Holger; Pauliquevis, Theotonio; Artaxo, Paulo

    2017-03-01

    subvisible cirrus clouds a bimodal distribution with a secondary peak at about 44 sr was found suggesting a mixed composition. A dependence of the lidar ratio with cloud temperature (altitude) was not found, indicating that the clouds are vertically well mixed. The frequency of occurrence of cirrus clouds classified as subvisible (τ < 0. 03) were 41.6 %, whilst 37.8 % were thin cirrus (0. 03 < τ < 0. 3) and 20.5 % opaque cirrus (τ > 0. 3). Hence, in central Amazonia not only a high frequency of cirrus clouds occurs, but also a large fraction of subvisible cirrus clouds. This high frequency of subvisible cirrus clouds may contaminate aerosol optical depth measured by sun photometers and satellite sensors to an unknown extent.

  8. Testicular and Color Variation in the Kissing Bug, Rhodnius brethesi, in Amazonas, Brazil

    PubMed Central

    Bonifácio, Sandra F.; Junqueira, Ângela C.V.; Souza, Ana L.B.; Gonçalves, Teresa C.M.

    2012-01-01

    Because of the morphological and morphometric variation of testicular follicles in different genera of the subfamily Triatominae, it was of interest to associate those parameters with the different medial pronotal band patterns (wide and narrow) found in Rhodnius brethesi (Matta) (Hemiptera: Reduviidae). This is a wild species often associated with Leopoldina piassaba Wallace (Arecales: Arecaceae) palm, with a geographical distribution restricted to the Amazon region. The specimens used were from the state of Amazonas, and were kept under conditions of 29 ± 1 °C, 80 ± 5% RH, 12:12 L:D photoperiod, and were fed weekly on blood from Swiss mice. Three—day—old fasting males were separated in accordance with the patterns of the medial pronotal band, dissected, and the testicles removed. After removal of the testicular membrane, the follicles were spread, drawn by camera lucida, and measured. The results showed that the testis of R. brethesi consists of seven follicles, divided into two groups by length; two long and five short. In specimens with a wide medial pronotal band, the long follicles were 5.4 mm in length, but in specimens with a narrow medial band, the long follicles were 5.64 mm in length. The difference was significant. The short follicles were not different in length, suggesting the presence of a possible complex “brethesi” in the Amazon region. PMID:22938518

  9. Successful Treatment of Suspected Pulmonary Arterial Hypertension in a Mealy Amazon Parrot (Amazona farinose).

    PubMed

    Brady, Sean M; Burgdorf-Moisuk, Anne; Silverman, Sarah; Wack, Raymund F

    2016-12-01

    A 25-year-old, male mealy Amazon parrot (Amazona farinose) with a history of polycythemia, hepatomegaly, and epistaxis was evaluated for progressive lethargy and anorexia. Clinical laboratory testing revealed severe polycythemia (71%), hypophosphatemia (1.6 mg/dL), and mild hypokalemia (2.8 mEq/L). Radiographs showed marked hepatomegaly and loss of air sac space. Despite supportive treatments, the bird's condition deteriorated, and it developed ataxia, was unable to fly, and became oxygen dependent. An echocardiogram, including an air bubble study, revealed a right-to-left atrial shunt and presumed pulmonary arterial hypertension. The bird was started on periodic phlebotomy (5-10 mL/kg q6wk) to reduce packed cell volume and sildenafil citrate (2.5 mg/kg PO q8h) for treatment of suspected pulmonary arterial hypertension. One week later, the patient was weaned off oxygen, and 24 days after initial presentation, the parrot was returned to its outdoor exhibit. Intermittent periods of increased respiratory rate and effort have been reported but have resolved without additional treatments. Epistaxis, once common in this bird, has not been noted since initiating treatment with sildenafil citrate 15 months ago.

  10. Conodont color alteration index and upper Paleozoic thermal history of the Amazonas Basin, Brazil

    NASA Astrophysics Data System (ADS)

    Cardoso, Cassiane Negreiros; Sanz-López, Javier; Blanco-Ferrera, Silvia; Lemos, Valesca Brasil; Scomazzon, Ana Karina

    2015-12-01

    The conodont color alteration index (CAI) was determined in elements from core samples of the Frasnian Barreirinha Formation (one well) and of the Pennsylvanian-Permian Tapajós Group (twenty three wells and one limestone quarry) in the Amazonas Basin. The thermal history of the basin is analyzed using the CAI value distribution represented in maps and stratigraphic sections through correlation schemes, and in conjunction with previously published data. The pattern of palaeotemperatures for CAI values of 1.5-3 is coincident with organic matter maturation under a sedimentary overburden providing diagenetic conditions in the oil/gas window. Locally, conodonts show metamorphism (CAI value of 6-7) in relation to the intrusion of diabase bodies in beds including high geothermal gradient evaporites. Microtextural alteration on the surface conodonts commonly shows several types of overgrowth microtextures developed in diagenetic conditions. Locally, recrystallization in conodonts with a high CAI value is congruent with contact metamorphism in relation to Mesozoic intrusions. The CAI values of 1.5 or 2 observed close to the surface in several areas of the basin may be interpreted in relation to a high thermal palaeogradient derived from the magmatic episode or/and to the local denudation of the upper part of the Paleozoic succession prior to this thermal event.

  11. Temporal genetic structure of major dengue vector Aedes aegypti from Manaus, Amazonas, Brazil.

    PubMed

    Mendonça, Barbara Alessandra Alves; de Sousa, Adna Cristina Barbosa; de Souza, Anete Pereira; Scarpassa, Vera Margarete

    2014-06-01

    In recent years, high levels of Aedes aegypti infestation and several dengue outbreaks with fatal outcome cases have been reported in Manaus, State of Amazonas, Brazil. This situation made it important to understand the genetic structure and gene flow patterns among the populations of this vector in Manaus, vital pieces of information for their management and development of new control strategies. In this study, we used nine microsatellite loci to examine the effect of seasonality on the genetic structure and gene flow patterns in Ae. aegypti populations from four urban neighborhoods of Manaus, collected during the two main rainy and dry seasons. All loci were polymorphic in the eight samples from the two seasons, with a total of 41 alleles. The genetic structure analyses of the samples from the rainy season revealed genetic homogeneity and extensive gene flow, a result consistent with the abundance of breeding sites for this vector. However, the samples from the dry season were significantly structured, due to a reduction of Ne in two (Praça 14 de Janeiro and Cidade Nova) of the four samples analyzed, and this was the primary factor influencing structure during the dry season. Genetic bottleneck analyses suggested that the Ae. aegypti populations from Manaus are being maintained continuously throughout the year, with seasonal reduction rather than severe bottleneck or extinction, corroborating previous reports. These findings are of extremely great importance for designing new dengue control strategies in Manaus.

  12. Static and dynamic (18) FDG-PET in normal hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Souza, Marcy J; Wall, Jonathan S; Stuckey, Alan; Daniel, Gregory B

    2011-01-01

    Positron emission tomography (PET) is often used to stage and monitor human cancer and has recently been used in a similar fashion in veterinary medicine. The most commonly used radiopharmaceutical is 2-Deoxy-2-[(18) F]-Fluoro-d-glucose ((18) F-FDG), which is concentrated and trapped within cells that use glucose as their energy substrate. We characterized the normal distribution of (18) F-FDG in 10 healthy Hispaniolan Amazon parrots (Amazona ventralis) by performing whole body PET scans at steady state, 60min after injection. Significant variability was found in the intestinal activity. Avian species are known to reflux fluid and electrolytes from their cloaca into their colon. To evaluate reflux as the cause of variability in intestinal distribution of (18) F-FDG, dynamic PET scans were performed on the coelomic cavity of six Hispaniolan Amazon parrots from time 0 to 60min postinjection of radiotracer. Reflux of radioactive material from the cloaca into the colon occurred in all birds to varying degrees and occurred before 60min. To evaluate the intestinal tract of clinical avian patients, dynamic scans must be performed starting immediately after injection so that increased radioactivity due to metabolism or hypermetabolic lesions such as cancer can be differentiated from increased radioactivity due to reflux of fluid from the cloaca.

  13. A presumptive case of Baylisascaris procyonis in a feral green-cheeked Amazon parrot (Amazona viridigenalis).

    PubMed

    Done, Lisa B; Tamura, Yoko

    2014-03-01

    A feral green-cheeked Amazon parrot (Amazona viridigenalis), also known as the red-crowned Amazon, with generalized neurologic symptoms was found in Pasadena in Southern California and brought in for treatment. The bird was refractory to a wide variety of medications and supportive treatment. Tests for polyoma virus, psittacine beak and feather disease virus, and West Nile virus as well as Chlamydophila psittaci were negative. Hospitalized and home care continued for a total of 69 days. The bird was rehospitalized on day 66 for increasing severity of clinical signs and found 3 days later hanging with its head down, in respiratory arrest. Resuscitation was unsuccessful. There were no gross pathologic lesions. Histopathology showed a focal subcutaneous fungal caseous granuloma under the skin of the dorsum. Many sarcocysts morphologically consistent with Sarcocystis falcatula were found in the cytoplasm of the skeletal myofibers from skeletal muscles of different locations of this bird, a finding that was considered an incidental, clinically nonsignificant finding in this case. Necrosis with microscopic lesions typical of Baylisascaris spp. neural larva migrans was in the brain. Although multiple histologic serial sections of the brain were examined and a brain squash performed and analyzed, no Baylisascaris larvae were found. This is the first presumptive case of Baylisascaris in a feral psittacine.

  14. Thromboelastography Values in Hispaniolan Amazon Parrots ( Amazona ventralis ): A Pilot Study.

    PubMed

    Keller, Krista A; Sanchez-Migallon Guzman, David; Acierno, Mark J; Beaufrère, Hugues; Sinclair, Kristin M; Owens, Sean D; Paul-Murphy, Joanne; Tully, Thomas N

    2015-09-01

    Thromboelastography (TEG) provides a global assessment of coagulation, including the rate of clot initiation, clot kinetics, achievement of maximum clot strength, and fibrinolysis. Thromboelastography (TEG) is used with increasing frequency in the field of veterinary medicine, although its usefulness in avian species has not been adequately explored. The purpose of this preliminary study was to assess the applicability of TEG in psittacine birds. Kaolin-activated TEG was used to analyze citrated whole blood collected routinely from 8 healthy adult Hispaniolan Amazon parrots ( Amazona ventralis ). The minimum and maximum TEG values obtained included time to clot initiation (2.6-15 minutes), clot formation time (4.3-20.8 minutes), α angle (12.7°-47.9°), maximum amplitude of clot strength (26.3-46.2 mm), and percentage of lysis 30 minutes after achievement of maximum amplitude (0%-5.3%). The TEG values demonstrated comparative hypocoagulability relative to published values in canine and feline species. Differences may be explained by either the in vitro temperature at which TEG is standardly performed or the method of activation used in this study. Although TEG may have significant advantages over traditional coagulation tests, including lack of need for species-specific reagents, further evaluation is required in a variety of avian species and while exploring various TEG methodologies before this technology can be recommended for use in clinical cases.

  15. Pericardial Mesothelioma in a Yellow-naped Amazon Parrot (Amazona auropalliata).

    PubMed

    McCleery, Brynn; Jones, Michael P; Manasse, Jorden; Johns, Sara; Gompf, Rebecca E; Newman, Shelley

    2015-03-01

    A 37-year-old female yellow-naped Amazon parrot (Amazona auropalliata) was presented with a history of lethargy, inappetence, and decreased vocalizations. On examination, the coelom was moderately distended and palpated fluctuant, and the heart was muffled on auscultation. Coelomic ultrasound, coelomocentesis, and radiographs were performed and revealed an enlarged cardiac silhouette and marked coelomic effusion. Pericardial effusion was confirmed by echocardiography. A well-circumscribed, hyperechoic soft tissue density was observed at the level of the right atrium on initial echocardiography; however, a cardiac mass was not identified by computed tomography scan or repeat echocardiograms. Ultrasound-guided pericardiocentesis was performed under anesthesia, and cytology results were consistent with hemorrhage; no neoplastic cells were identified. A repeat echocardiogram 4 days after pericardiocentesis revealed recurrence of the pericardial effusion. Due to the grave prognosis, the owners declined endoscopic pericardiectomy, and the patient died the following day. On postmortem examination, the pericardial surface of the heart was covered in a white to yellow, multinodular mass layer. Histologic analysis revealed a multinodular mass extending from the atria, running along the epicardium distally, and often extending into the myocardium. Neoplastic cells present in the heart mass and pericardium did not stain with a Churukian-Schenk stain, and thyroglobulin immunohistochemistry was negative. Cytokeratin and vimentin stains showed positive expression in the neoplastic cells within the mass. These results are consistent with a diagnosis of mesothelioma. This is the first report of mesothelioma in a psittacine bird.

  16. Attempted semen collection using the massage technique in blue-fronted Amazon parrots (Amazona aestiva aestiva).

    PubMed

    Della Volpe, Angelique; Volker, Schmidt; Krautwald-Junghanns, Maria-Elisabeth

    2011-03-01

    The purpose of this study was to establish a technique for collecting semen from blue-fronted Amazon parrots (Amazona aestiva aestiva) and to evaluate the samples that were collected. The massage method is the most common technique used to collect semen in birds and has been proven successful in several psittacine species; however, collection attempts in larger parrots have been unsatisfactory. Six blue-fronted Amazon parrot males, 3 paired with hens and 3 unpaired, were used in this study. The semen collection technique was revised to allow collection from individual birds by a single person. Semen collection was attempted from the 6 parrots on 52-56 occasions, which totaled 330 single attempts. Nineteen ejaculates were collected, and each bird produced at least 1 ejaculate that contained spermatozoa. Large ranges of sample volume (1-15.4 microL), sperm quality (motility = 2%-60%; live:dead ratio = 2:198 to 185:15), sperm concentration (0.79-3.3 x 10(6) sperm/mL), and contamination rate (0%-100%) were observed. Measured parameters did not appear to be significantly impacted by birds being paired or kept singly. Because of the relatively short acclimation period, the birds appeared to be sexually inactive for the majority of the study. Further research using sexually active birds will be necessary to determine standard spermatological parameters and verify the success of the methodology used here.

  17. Fluoroscopic study of the normal gastrointestinal motility and measurements in the Hispaniolan Amazon parrot (Amazona ventralis).

    PubMed

    Beaufrère, Hugues; Nevarez, Javier; Taylor, W Michael; Jankowski, Gwendolyn; Rademacher, Nathalie; Gaschen, Lorrie; Pariaut, Romain; Tully, Thomas N

    2010-01-01

    Contrast fluoroscopy is a valuable tool to examine avian gastrointestinal motility. However, the lack of a standardized examination protocol and reference ranges prevents the objective interpretation of motility disorders and other gastrointestinal abnormalities. Our goals were to evaluate gastrointestinal motility in 20 Hispaniolan Amazon parrots (Amazona ventralis) by contrast fluoroscopy. Each parrot was crop-fed an equal part mixture of barium sulfate and hand-feeding formula and placed in a cardboard box for fluoroscopy. Over a 3-h period, 1.5 minute segments of lateral and ventrodorsal fluoroscopy were recorded every 30 min. The gastric cycle and patterns of intestinal motility were described. The frequency of crop contractions, esophageal boluses, and gastric cycles were determined in lateral and ventrodorsal views. A range of 3.4-6.6 gastric cycles/min was noted on the lateral view and 3.0-6.6 gastric cycles/min on the ventrodorsal view. Circular measurements of the proventriculus diameter, ventriculus width, and length were obtained using the midshaft femoral diameter as a standard reference unit. The upper limits of the reference ranges were 3.6 and 4.7 femoral units for the proventriculus diameter in the lateral and ventrodorsal view, respectively. Two consecutive measurements were obtained and the measurement technique was found to have high reproducibility. In this study, we established a standardized protocol for contrast fluoroscopic examination of the gastrointestinal tract and a reliable measurement method of the proventriculus and ventriculus using femoral units in the Hispaniolan Amazon parrot.

  18. Comparison of osmolality and refractometric readings of Hispaniolan Amazon parrot (Amazona ventralis) urine.

    PubMed

    Brock, A Paige; Grunkemeyer, Vanessa L; Fry, Michael M; Hall, James S; Bartges, Joseph W

    2013-12-01

    To evaluate the relationship between osmolality and specific gravity of urine samples from clinically normal adult parrots and to determine a formula to convert urine specific gravity (USG) measured on a reference scale to a more accurate USG value for an avian species, urine samples were collected opportunistically from a colony of Hispaniolan Amazon parrots (Amazona ventralis). Samples were analyzed by using a veterinary refractometer, and specific gravity was measured on both canine and feline scales. Osmolality was measured by vapor pressure osmometry. Specific gravity and osmolality measurements were highly correlated (r = 0.96). The linear relationship between refractivity measurements on a reference scale and osmolality was determined. An equation was calculated to allow specific gravity results from a medical refractometer to be converted to specific gravity values of Hispaniolan Amazon parrots: USGHAp = 0.201 +0.798(USGref). Use of the reference-canine scale to approximate the osmolality of parrot urine leads to an overestimation of the true osmolality of the sample. In addition, this error increases as the concentration of urine increases. Compared with the human-canine scale, the feline scale provides a closer approximation to urine osmolality of Hispaniolan Amazon parrots but still results in overestimation of osmolality.

  19. Hydrocephalus in a yellow-headed Amazon parrot (Amazona ochrocephala oratrix).

    PubMed

    Keller, Krista A; Guzman, David Sanchez-Migallon; Muthuswamy, Anantharaman; Forrest, Lisa J; Steinberg, Howard; Sladky, Kurt; Petersen, Sophie

    2011-09-01

    A 37-year-old female yellow-headed Amazon parrot (Amazona ochrocephala oratrix) was presented after a 4-month-period behavior change and intermittent episodes of obtunded mentation. Clinical findings on physical examination included ataxia, a weak grasp, and reluctance to move. Results of magnetic resonance imaging were consistent with severe hydrocephalus without evidence of cerebrospinal fluid obstruction. The bird was treated with tapering dosages of prednisolone over a 4-month period, during which time the episodes did not occur. Discontinuation of treatment was attempted several times but resulted in relapse. After 3.5 years of maintenance treatment with prednisolone, the bird was presented subsequent to a 5-hour episode of obtunded mentation and worsening neurologic signs. Despite increasing the dose of prednisolone and providing additional supportive care, the bird's condition worsened, and euthanasia was elected. Necropsy findings included severe hydrocephalus with significant loss of right cerebral parenchyma and no evidence of cerebrospinal fluid obstruction. Histologic examination of the remaining cerebral parenchyma revealed a moderate, multifocal, cellular infiltrate; encephalomalacia; fibrosis; and hemosiderosis in tissue adjacent to the distended ventricles. Other findings included hepatic vacuolar degeneration. Diagnostic imaging and postmortem findings were consistent with a diagnosis of hydrocephalus ex vacuo. To our knowledge, this is the first report of hydrocephalus in an Amazon parrot as well as the first report of hydrocephalus in any avian species associated with long-term follow-up and prolonged corticosteroid treatment.

  20. Pharmacokinetics of Compounded Intravenous and Oral Gabapentin in Hispaniolan Amazon Parrots ( Amazona ventralis ).

    PubMed

    Baine, Katherine; Jones, Michael P; Cox, Sherry; Martín-Jiménez, Tomás

    2015-09-01

    Neuropathic pain is a manifestation of chronic pain that arises with damage to the somatosensory system. Pharmacologic treatment recommendations for alleviation of neuropathic pain are often multimodal, and the few reports communicating treatment of suspected neuropathic pain in avian patients describe the use of gabapentin as part of the therapeutic regimen. To determine the pharmacokinetics of gabapentin in Hispaniolan Amazon parrots ( Amazona ventralis ), compounded gabapentin suspensions were administered at 30 mg/kg IV to 2 birds, 10 mg/kg PO to 3 birds, and 30 mg/kg PO to 3 birds. Blood samples were collected immediately before and at 9 different time points after drug administration. Plasma samples were analyzed for gabapentin concentration, and pharmacokinetic parameters were calculated with both a nonlinear mixed-effect approach and a noncompartmental analysis. The best compartmental, oral model was used to simulate the concentration-time profiles resulting from different dosing scenarios. Mild sedation was observed in both study birds after intravenous injection. Computer simulation of different dosing scenarios with the mean parameter estimates showed that 15 mg/kg every 8 hours would be a starting point for oral dosing in Hispaniolan Amazon parrots based on effective plasma concentrations reported for human patients; however, additional studies need to be performed to establish a therapeutic dose.

  1. Hematologic, Plasma Biochemical, and Lipid Panel Reference Intervals in Orange-winged Amazon Parrots ( Amazona amazonica ).

    PubMed

    Vergneau-Grosset, Claire; Polley, Tamsen; Holt, Danielle Carrade; Vernau, William; Paul-Murphy, Joanne

    2016-12-01

    To establish reference intervals in orange-winged Amazon parrots ( Amazona amazonica ) for the complete blood count, plasma biochemical values, and lipid panel and to evaluate age- and sex-related variations, blood samples were obtained from 29 healthy juvenile and adult parrots. Concentrations of total protein, bile acids, phosphorus, total cholesterol, low-density-lipoprotein cholesterol (LDL-C), and high-density lipoprotein cholesterol were significantly higher in adult compared with juvenile birds, while uric acid concentration was significantly higher in juveniles. The white blood cell count, lymphocyte count, and phosphorus and potassium concentrations were significantly higher in females, while chloride concentration was significantly higher in males. In this species, direct measurement of LDL-C resulted in lower concentrations than LDL-C calculated with the Friedewald formula. Assessment of the agreement between the calculated and measured LDL-C concentrations indicated a systematic bias of 19.1 mg/dL and a proportional bias of 1.07. A correction factor of -19 mg/L could be applied to the Friedewald formula, to obtain a result closer to the measured LDL-C, providing clinically acceptable (<20% difference) agreement in 66% of the samples. Triglyceride concentrations within the range measured in healthy birds of the present study did not significantly affect the bias between calculated and directly measured LDL-C. Further studies are needed to investigate the impact of nutritional factors, genetics, and exercise on biochemistry and lipoprotein panel analytes in orange-winged Amazon parrots.

  2. Testicular and color variation in the kissing bug, Rhodnius brethesi, in Amazonas, Brazil.

    PubMed

    Freitas, Simone P C; Bonifácio, Sandra F; Junqueira, Angela C V; Souza, Ana L B; Gonçalves, Teresa C M

    2012-01-01

    Because of the morphological and morphometric variation of testicular follicles in different genera of the subfamily Triatominae, it was of interest to associate those parameters with the different medial pronotal band patterns (wide and narrow) found in Rhodnius brethesi (Matta) (Hemiptera: Reduviidae). This is a wild species often associated with Leopoldina piassaba Wallace (Arecales: Arecaceae) palm, with a geographical distribution restricted to the Amazon region. The specimens used were from the state of Amazonas, and were kept under conditions of 29 ± 1 °C, 80 ± 5% RH, 12:12 L:D photoperiod, and were fed weekly on blood from Swiss mice. Three-day-old fasting males were separated in accordance with the patterns of the medial pronotal band, dissected, and the testicles removed. After removal of the testicular membrane, the follicles were spread, drawn by camera lucida, and measured. The results showed that the testis of R. brethesi consists of seven follicles, divided into two groups by length; two long and five short. In specimens with a wide medial pronotal band, the long follicles were 5.4 mm in length, but in specimens with a narrow medial band, the long follicles were 5.64 mm in length. The difference was significant. The short follicles were not different in length, suggesting the presence of a possible complex "brethesi" in the Amazon region.

  3. Antinociceptive effects of tramadol hydrochloride after intravenous administration to Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Geelen, Saskia; Sanchez-Migallon Guzman, David; Souza, Marcy J; Cox, Sherry; Keuler, Nicholas S; Paul-Murphy, Joanne R

    2013-02-01

    To determine the antinociceptive and sedative effects of tramadol in Hispaniolan Amazon parrots (Amazona ventralis) following IV administration. 11 healthy Hispaniolan Amazon parrots of unknown sex. Tramadol hydrochloride (5 mg/kg, IV) and an equivalent volume (≤ 0.34 mL) of saline (0.9% NaCl) solution were administered to parrots in a complete crossover study design. Foot withdrawal response to a thermal stimulus was determined 30 to 60 minutes before (baseline) and 15, 30, 60, 120, and 240 minutes after treatment administration; agitation-sedation scores were determined for parrots at each of those times. The estimated mean changes in temperature from the baseline value that elicited a foot withdrawal response were 1.65° and -1.08°C after administration of tramadol and saline solution, respectively. Temperatures at which a foot withdrawal response was elicited were significantly higher than baseline values at all 5 evaluation times after administration of tramadol and were significantly lower than baseline values at 30, 120, and 240 minutes after administration of saline solution. No sedation, agitation, or other adverse effects were observed in any of the parrots after administration of tramadol. Tramadol hydrochloride (5 mg/kg, IV) significantly increased the thermal nociception threshold for Hispaniolan Amazon parrots in the present study. Sedation and adverse effects were not observed. These results are consistent with results of other studies in which the antinociceptive effects of tramadol after oral administration to parrots were determined.

  4. Pharmacokinetics of nalbuphine hydrochloride after intravenous and intramuscular administration to Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Keller, Dominique L; Sanchez-Migallon Guzman, David; Klauer, Julia M; KuKanich, Butch; Barker, Steven A; Rodríguez-Ramos Fernández, Julia; Paul-Murphy, Joanne R

    2011-06-01

    To assess the pharmacokinetics of nalbuphine HCl after IV and IM administration to Hispaniolan Amazon parrots (Amazona ventralis). 8 healthy adult Hispaniolan Amazon parrots of unknown sex. Nalbuphine HCl (12.5 mg/kg) was administered IV and IM to all birds in a complete randomized crossover study design; there was a washout period of 21 days between subsequent administrations. Plasma samples were obtained from blood collected at predetermined time points for measurement of nalbuphine concentration by use of liquid chromatography-tandem mass spectrometry. Pharmacokinetic parameters were estimated by use of computer software. Nalbuphine was rapidly eliminated with a terminal half-life of 0.33 hours and clearance of 69.95 mL/min/kg after IV administration and a half-life of 0.35 hours after IM administration. Volume of distribution was 2.01 L/kg after IV administration. The fraction of the dose absorbed was high (1.03) after IM administration. No adverse effects were detected in the parrots during the study. In Hispaniolan Amazon parrots, nalbuphine appeared to have good bioavailability after IM administration and was rapidly cleared after IV and IM administration. Safety and analgesic efficacy of various nalbuphine treatment regimens in this species require further investigation to determine the potential for clinical palliation of signs of pain in psittacine species.

  5. Pharmacokinetics of long-acting nalbuphine decanoate after intramuscular administration to Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Sanchez-Migallon Guzman, David; KuKanich, Butch; Heath, Timothy D; Krugner-Higby, Lisa A; Barker, Steven A; Brown, Carolyn S; Paul-Murphy, Joanne R

    2013-02-01

    To evaluate the pharmacokinetics of nalbuphine decanoate after IM administration to Hispaniolan Amazon parrots (Amazona ventralis). 9 healthy adult Hispaniolan Amazon parrots of unknown sex. Nalbuphine decanoate (37.5 mg/kg) was administered IM to all birds. Plasma samples were obtained from blood collected before (time 0) and 0.25, 1, 2, 3, 6, 12, 24, 48, and 96 hours after drug administration. Plasma samples were used for measurement of nalbuphine concentrations via liquid chromatography-tandem mass spectrometry. Pharmacokinetic parameters were estimated with computer software. Plasma concentrations of nalbuphine increased rapidly after IM administration, with a mean concentration of 46.1 ng/mL at 0.25 hours after administration. Plasma concentrations of nalbuphine remained > 20 ng/mL for at least 24 hours in all birds. The maximum plasma concentration was 109.4 ng/mL at 2.15 hours. The mean terminal half-life was 20.4 hours. In Hispaniolan Amazon parrots, plasma concentrations of nalbuphine were prolonged after IM administration of nalbuphine decanoate, compared with previously reported results after administration of nalbuphine hydrochloride. Plasma concentrations that could be associated with antinociception were maintained for 24 hours after IM administration of 37.5 mg of nalbuphine decanoate/kg. Safety and analgesic efficacy of nalbuphine treatments in this species require further investigation to determine the potential for clinical use in pain management in psittacine species.

  6. Pharmacokinetics of terbinafine after oral administration of a single dose to Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Evans, Erika E; Emery, Lee C; Cox, Sherry K; Souza, Marcy J

    2013-06-01

    To determine pharmacokinetics after oral administration of a single dose of terbinafine hydrochloride to Hispaniolan Amazon parrots (Amazona ventralis). 6 healthy adult Hispaniolan Amazon parrots. A single dose of terbinafine hydrochloride (60 mg/kg) was administered orally to each bird, which was followed immediately by administration of a commercially available gavage feeding formula. Blood samples were collected at the time of drug administration (time 0) and 0.25, 0.5, 1, 2, 4, 8, 12, and 24 hours after drug administration. Plasma concentrations of terbinafine were determined via high-performance liquid chromatography. Data from 1 bird were discarded because of a possible error in the dose of drug administered. After oral administration of terbinafine, the maximum concentration for the remaining 5 fed birds ranged from 109 to 671 ng/mL, half-life ranged from 6 to 13.5 hours, and time to the maximum concentration ranged from 2 to 8 hours. No adverse effects were observed. Analysis of the results indicated that oral administration of terbinafine at a dose of 60 mg/kg to Amazon parrots did not result in adverse effects and may be potentially of use in the treatment of aspergillosis. Additional studies are needed to determine treatment efficacy and safety.

  7. Cutaneous lymphosarcoma in a double yellow-headed Amazon parrot (Amazona ochrocephala oratrix).

    PubMed

    Burgos-Rodríguez, Armando G; Garner, Michael; Ritzman, Tracey K; Orcutt, Connie J

    2007-12-01

    A 2-year-old double yellow-headed Amazon parrot (Amazona ochrocephala oratrix) was presented for evaluation of a mass on the left wing. A second soft tissue swelling was present under the left mandible and a third in the right inguinal region. The bird had pale mucous membranes, but no other abnormalities were observed on physical examination. Results of the complete blood count and plasma biochemical profile were anemia and decreased total solids. Cytologic findings from fine needle aspirates of the 3 affected areas were nondiagnostic. Whole-body radiographs revealed focal soft tissue swellings. Doppler ultrasound demonstrated significant vascularity in the inguinal swelling; therefore, biopsy of the area was considered contraindicated. Because of the rapid and extensive progression of disease, the owners elected euthanasia. Gross postmortem examination revealed marked and generalized skin thickening. The spleen was slightly enlarged and the bone marrow prominent and gelatinous. The histologic diagnosis was lymphosarcoma, which involved the skin, spleen, and bone marrow. Immunohistochemistry results were consistent with lymphosarcoma of T-cell origin. This case presents an unusual cutaneous manifestation of lymphosarcoma in an Amazon parrot.

  8. Endocarditis due to Lactobacillus jensenii in a Salvin's Amazon parrot (Amazona autumnalis salvini).

    PubMed

    Foldenauer, Ulrike; Rusch, Martina; Simova-Curd, Stefka; Nitzl, Dagmar; Hoop, Richard K; Hatt, Jean-Michel

    2009-02-01

    A 30-year-old Salvin's Amazon parrot (Amazona autumnalis salvini) with a history of a lifelong poor diet and inappropriate housing was presented in lateral recumbency to a veterinary teaching hospital for further evaluation. Radiological and ultrasonographic examination revealed a mild proventricular dilatation, mild hepatomegaly, signs of enteritis and airsacculitis. The main laboratory findings included a mild macrocytic hyperchromic anaemia, hypoglobulinaemia, decreased bile acids and increased alkaline phosphatase. In this bird a liver pathology was suspected because of the clinical, laboratory and ultrasonographic findings. The bird was treated with supportive care and metabolic aids. After initial improvement of the clinical signs, the bird's condition deteriorated and it died. Pathological findings revealed an endocarditis and myocarditis due to Lactobacillus jensenii and a bacteraemia. Endocarditis due to Lactobacillus sp. is a rare phenomenon in humans not yet described in animals. It is associated with severe underlying illnesses leading to translocation of otherwise non-pathogenic bacteria in the bloodstream. A similar pattern might be assumed in animals with compromised immunity.

  9. Ovarian hemangiosarcoma in an orange-winged Amazon parrot (Amazona amazonica).

    PubMed

    Mickley, Kimberly; Buote, Melanie; Kiupel, Matti; Graham, Jennifer; Orcutt, Connie

    2009-03-01

    A 25-year-old intact female orange-winged Amazon parrot (Amazona amazonica) presented for a 2-week history of straining to defecate, lethargy, open-beak breathing, decreased vocalization, and ruffled feathers. On physical examination, the parrot had a heart murmur, increased air sac and lung sounds, open-beak breathing, increased respiratory rate and effort, and coelomic distension. An ultrasound revealed intracoelomic fluid, and hemorrhagic fluid was aspirated from the coelom. Cytologic analysis indicated hemocoelom. Pericardial effusion was observed during the sonogram, and pericardiocentesis was performed. The bird was euthanatized upon the owner's request because of a poor prognosis. At necropsy, several masses that involved the ovary and oviduct were observed, as well as a thickened pericardium and a thickened, fibrinous epicardium. Results of a histopathologic examination of the masses that involved the reproductive tract revealed ovarian hemangiosarcoma, which was confirmed by immunohistochemical staining. To our knowledge, ovarian hemangiosarcoma has not been reported in a psittacine species, nor has immunohistochemistry confirmed ovarian hemangiosarcoma in avian species, specifically in an orange-winged Amazon parrot.

  10. Renal, gastrointestinal, and hemostatic effects of oral administration of meloxicam to Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Dijkstra, Bas; Guzman, David Sanchez-Migallon; Gustavsen, Kate; Owens, Sean D; Hass, Carlyle; Kass, Philip H; Paul-Murphy, Joanne R

    2015-04-01

    To investigate renal, gastrointestinal, and hemostatic effects associated with oral administration of multiple doses of meloxicam to healthy Hispaniolan Amazon parrots (Amazona ventralis). 12 Hispaniolan Amazon parrots. Birds were assigned to receive meloxicam oral suspension (1.6 mg/kg, PO, q 12 h) and 2.5 mL of tap water inserted into the crop by use of a gavage tube (n = 8) or the equivalent volume of tap water only (control group; 4) for 15 days. Urine and feces were collected 2 hours after treatment administration each day. Feces were evaluated for occult blood. Results of a CBC and serum biochemical analysis and measured N-acetyl-β-d-glucosaminidase (NAG) activity and whole blood clotting time were evaluated before, during, and after completion of treatments. Results of urinalysis and measured urine NAG activity were also evaluated. Birds treated with meloxicam had a significant increase in number of WBCs and decrease in PCV from before to after treatment. The PCV also decreased significantly, compared with results for the control group; however, WBC count and PCV for all birds remained within reference ranges throughout the study. One parrot treated with meloxicam had a single high value for urine NAG activity. Meloxicam administered orally at the dosage used in this study caused no apparent negative changes in several renal, gastrointestinal, or hemostatic variables in healthy Hispaniolan Amazon parrots. Additional studies to evaluate adverse effects of NSAIDs in birds will be needed.

  11. Tropical deforestation: Not just a problem in Amazonia

    SciTech Connect

    Aldhous, P.

    1993-03-05

    Think of tropical deforestation, and the image that comes most readily to mind is of chainsaws chewing their way through the Amazon basin. But the popular perception that the rain forests of Brazil represent the most threatened of the world's tropical forest ecosystems needs overhauling, according to a new assessment from the United Nations Food and Agriculture Organization (FAO). The Amazon rain forests are being cleared at an alarming rate, the new study shows, but rain forests in some other regions, along with other tropical forest types, are in an even more parlous state. South America accounts for the largest absolute losses, but in terms of percentages, Southeast Asia and Central America are losing their forests at a faster rate. Also, moist deciduous and upland forests are disappearing at a faster rate than the rain forests.

  12. Biomass-burning emissions and associated haze layers over Amazonia

    NASA Technical Reports Server (NTRS)

    Andreae, M. O.; Browell, E. V.; Gregory, G. L.; Harriss, R. C.; Hill, G. F.; Sachse, G. W.; Talbot, R. W.; Garstang, M.; Jacob, D. J.; Torres, A. L.

    1988-01-01

    The characteristics of haze layers, which were visually observed over the central Amazon Basin during many of the Amazon Boundary Layer Experiment 2A flights in July/August 1985, were investigated by remote and in situ measurements, using the broad range of instrumentation and sampling equipment on board the Electra aircraft. It was found that these layers strongly influenced the chemical and optical characteristics of the atmosphere over the eastern Amazon Basin. Relative to the regional background, the concentrations of CO, CO2, O3, and NO were significantly elevated in the plumes and haze layers, with the NO/CO ratio in fresh plumes much higher than in the aged haze layers. The haze aerosol was composed predominantly of organic material, NH4, K(+), NO3(-), SO4(2-), and organic anions (formate, acetate, and oxalate).

  13. Remote sensing of selective logging in Amazonia Assessing limitations based on detailed field observations, Landsat ETM+, and textural analysis.

    Treesearch

    Gregory P. Asnera; Michael Keller; Rodrigo Pereira; Johan C. Zweeded

    2002-01-01

    We combined a detailed field study of forest canopy damage with calibrated Landsat 7 Enhanced Thematic Mapper Plus (ETM+) reflectance data and texture analysis to assess the sensitivity of basic broadband optical remote sensing to selective logging in Amazonia. Our field study encompassed measurements of ground damage and canopy gap fractions along a chronosequence of...

  14. Outstanding insecurities concerning the use of an Ov16-based ELISA in the Amazonia onchocerciasis focus

    PubMed Central

    Luz, Sérgio Luiz Bessa; Crainey, James Lee; Shelley, Anthony John; Rubio, Miguel

    2014-01-01

    In a recent issue of Memórias do Instituto Oswaldo Cruz, published in Rio de Janeiro in February 2014 (109: 87-92), Adami et al. have published a survey reporting Mansonella parasite prevalence in the Amazon Region. This report makes a useful contribution to the existing knowledge of filarial parasite distribution within the Amazon area, parasite prevalence rates in relation to age and occupation and provides observations on the possible clinical impact of Mansonella ozzardi. Their publication also provides an account of what appears to be a novel ELISA that has recently been used in the Simuliidae and Onchocerciasis Laboratory of the Oswaldo Cruz Institute, Rio de Janeiro, Brazil. We are concerned that the publication of this ELISA may have created an excessively positive impression of the effectiveness of the onchocerciasis recrudescence serological surveillance tools that are presently available for use in the Amazonia onchocerciasis focus. In this letter we have, thus, sought to highlight some of the limitations of this ELISA and suggest how continuing insecurities concerning the detection of antibodies to Onchocerca volvulus within the Amazonia onchocerciasis focus might be minimised. PMID:25075790

  15. Arsenic, manganese and aluminum contamination in groundwater resources of Western Amazonia (Peru).

    PubMed

    de Meyer, Caroline M C; Rodríguez, Juan M; Carpio, Edward A; García, Pilar A; Stengel, Caroline; Berg, Michael

    2017-12-31

    This paper presents a first integrated survey on the occurrence and distribution of geogenic contaminants in groundwater resources of Western Amazonia in Peru. An increasing number of groundwater wells have been constructed for drinking water purposes in the last decades; however, the chemical quality of the groundwater resources in the Amazon region is poorly studied. We collected groundwater from the regions of Iquitos and Pucallpa to analyze the hydrochemical characteristics, including trace elements. The source aquifer of each well was determined by interpretation of the available geological information, which identified four different aquifer types with distinct hydrochemical properties. The majority of the wells in two of the aquifer types tap groundwater enriched in aluminum, arsenic, or manganese at levels harmful to human health. Holocene alluvial aquifers along the main Amazon tributaries with anoxic, near pH-neutral groundwater contained high concentrations of arsenic (up to 700μg/L) and manganese (up to 4mg/L). Around Iquitos, the acidic groundwater (4.2≤pH≤5.5) from unconfined aquifers composed of pure sand had dissolved aluminum concentrations of up to 3.3mg/L. Groundwater from older or deeper aquifers generally was of good chemical quality. The high concentrations of toxic elements highlight the urgent need to assess the groundwater quality throughout Western Amazonia. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Use of MODIS Sensor Images Combined with Reanalysis Products to Retrieve Net Radiation in Amazonia.

    PubMed

    de Oliveira, Gabriel; Brunsell, Nathaniel A; Moraes, Elisabete C; Bertani, Gabriel; Dos Santos, Thiago V; Shimabukuro, Yosio E; Aragão, Luiz E O C

    2016-06-24

    In the Amazon region, the estimation of radiation fluxes through remote sensing techniques is hindered by the lack of ground measurements required as input in the models, as well as the difficulty to obtain cloud-free images. Here, we assess an approach to estimate net radiation (Rn) and its components under all-sky conditions for the Amazon region through the Surface Energy Balance Algorithm for Land (SEBAL) model utilizing only remote sensing and reanalysis data. The study period comprised six years, between January 2001-December 2006, and images from MODIS sensor aboard the Terra satellite and GLDAS reanalysis products were utilized. The estimates were evaluated with flux tower measurements within the Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA) project. Comparison between estimates obtained by the proposed method and observations from LBA towers showed errors between 12.5% and 16.4% and 11.3% and 15.9% for instantaneous and daily Rn, respectively. Our approach was adequate to minimize the problem related to strong cloudiness over the region and allowed to map consistently the spatial distribution of net radiation components in Amazonia. We conclude that the integration of reanalysis products and satellite data, eliminating the need for surface measurements as input model, was a useful proposition for the spatialization of the radiation fluxes in the Amazon region, which may serve as input information needed by algorithms that aim to determine evapotranspiration, the most important component of the Amazon hydrological balance.

  17. Use of MODIS Sensor Images Combined with Reanalysis Products to Retrieve Net Radiation in Amazonia

    PubMed Central

    de Oliveira, Gabriel; Brunsell, Nathaniel A.; Moraes, Elisabete C.; Bertani, Gabriel; dos Santos, Thiago V.; Shimabukuro, Yosio E.; Aragão, Luiz E. O. C.

    2016-01-01

    In the Amazon region, the estimation of radiation fluxes through remote sensing techniques is hindered by the lack of ground measurements required as input in the models, as well as the difficulty to obtain cloud-free images. Here, we assess an approach to estimate net radiation (Rn) and its components under all-sky conditions for the Amazon region through the Surface Energy Balance Algorithm for Land (SEBAL) model utilizing only remote sensing and reanalysis data. The study period comprised six years, between January 2001–December 2006, and images from MODIS sensor aboard the Terra satellite and GLDAS reanalysis products were utilized. The estimates were evaluated with flux tower measurements within the Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA) project. Comparison between estimates obtained by the proposed method and observations from LBA towers showed errors between 12.5% and 16.4% and 11.3% and 15.9% for instantaneous and daily Rn, respectively. Our approach was adequate to minimize the problem related to strong cloudiness over the region and allowed to map consistently the spatial distribution of net radiation components in Amazonia. We conclude that the integration of reanalysis products and satellite data, eliminating the need for surface measurements as input model, was a useful proposition for the spatialization of the radiation fluxes in the Amazon region, which may serve as input information needed by algorithms that aim to determine evapotranspiration, the most important component of the Amazon hydrological balance. PMID:27347957

  18. A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years.

    PubMed

    Ribas, Camila C; Aleixo, Alexandre; Nogueira, Afonso C R; Miyaki, Cristina Y; Cracraft, Joel

    2012-02-22

    Many hypotheses have been proposed to explain high species diversity in Amazonia, but few generalizations have emerged. In part, this has arisen from the scarcity of rigorous tests for mechanisms promoting speciation, and from major uncertainties about palaeogeographic events and their spatial and temporal associations with diversification. Here, we investigate the environmental history of Amazonia using a phylogenetic and biogeographic analysis of trumpeters (Aves: Psophia), which are represented by species in each of the vertebrate areas of endemism. Their relationships reveal an unforeseen 'complete' time-slice of Amazonian diversification over the past 3.0 Myr. We employ this temporally calibrated phylogeny to test competing palaeogeographic hypotheses. Our results are consistent with the establishment of the current Amazonian drainage system at approximately 3.0-2.0 Ma and predict the temporal pattern of major river formation over Plio-Pleistocene times. We propose a palaeobiogeographic model for the last 3.0 Myr of Amazonian history that has implications for understanding patterns of endemism, the temporal history of Amazonian diversification and mechanisms promoting speciation. The history of Psophia, in combination with new geological evidence, provides the strongest direct evidence supporting a role for river dynamics in Amazonian diversification, and the absence of such a role for glacial climate cycles and refugia.

  19. Avian malaria, ecological host traits and mosquito abundance in southeastern Amazonia.

    PubMed

    Fecchio, Alan; Ellis, Vincenzo A; Bell, Jeffrey A; Andretti, Christian B; D'Horta, Fernando M; Silva, Allan M; Tkach, Vasyl V; Weckstein, Jason D

    2017-03-27

    Avian malaria is a vector transmitted disease caused by Plasmodium and recent studies suggest that variation in its prevalence across avian hosts is correlated with a variety of ecological traits. Here we examine the relationship between prevalence and diversity of Plasmodium lineages in southeastern Amazonia and: (1) host ecological traits (nest location, nest type, flocking behaviour and diet); (2) density and diversity of avian hosts; (3) abundance and diversity of mosquitoes; and (4) season. We used molecular methods to detect Plasmodium in blood samples from 675 individual birds of 120 species. Based on cytochrome b sequences, we recovered 89 lineages of Plasmodium from 136 infected individuals sampled across seven localities. Plasmodium prevalence was homogeneous over time (dry season and flooding season) and space, but heterogeneous among 51 avian host species. Variation in prevalence among bird species was not explained by avian ecological traits, density of avian hosts, or mosquito abundance. However, Plasmodium lineage diversity was positively correlated with mosquito abundance. Interestingly, our results suggest that avian host traits are less important determinants of Plasmodium prevalence and diversity in southeastern Amazonia than in other regions in which they have been investigated.

  20. Understorey fire frequency and the fate of burned forests in southern Amazonia

    PubMed Central

    Morton, D. C.; Le Page, Y.; DeFries, R.; Collatz, G. J.; Hurtt, G. C.

    2013-01-01

    Recent drought events underscore the vulnerability of Amazon forests to understorey fires. The long-term impact of fires on biodiversity and forest carbon stocks depends on the frequency of fire damages and deforestation rates of burned forests. Here, we characterized the spatial and temporal dynamics of understorey fires (1999–2010) and deforestation (2001–2010) in southern Amazonia using new satellite-based estimates of annual fire activity (greater than 50 ha) and deforestation (greater than 10 ha). Understorey forest fires burned more than 85 500 km2 between 1999 and 2010 (2.8% of all forests). Forests that burned more than once accounted for 16 per cent of all understorey fires. Repeated fire activity was concentrated in Mato Grosso and eastern Pará, whereas single fires were widespread across the arc of deforestation. Routine fire activity in Mato Grosso coincided with annual periods of low night-time relative humidity, suggesting a strong climate control on both single and repeated fires. Understorey fires occurred in regions with active deforestation, yet the interannual variability of fire and deforestation were uncorrelated, and only 2.6 per cent of forests that burned between 1999 and 2008 were deforested for agricultural use by 2010. Evidence from the past decade suggests that future projections of frontier landscapes in Amazonia should separately consider economic drivers to project future deforestation and climate to project fire risk. PMID:23610169

  1. Early and middle holocene hunter-gatherer occupations in western Amazonia: the hidden shell middens.

    PubMed

    Lombardo, Umberto; Szabo, Katherine; Capriles, José M; May, Jan-Hendrik; Amelung, Wulf; Hutterer, Rainer; Lehndorff, Eva; Plotzki, Anna; Veit, Heinz

    2013-01-01

    We report on previously unknown early archaeological sites in the Bolivian lowlands, demonstrating for the first time early and middle Holocene human presence in western Amazonia. Multidisciplinary research in forest islands situated in seasonally-inundated savannahs has revealed stratified shell middens produced by human foragers as early as 10,000 years ago, making them the oldest archaeological sites in the region. The absence of stone resources and partial burial by recent alluvial sediments has meant that these kinds of deposits have, until now, remained unidentified. We conducted core sampling, archaeological excavations and an interdisciplinary study of the stratigraphy and recovered materials from three shell midden mounds. Based on multiple lines of evidence, including radiocarbon dating, sedimentary proxies (elements, steroids and black carbon), micromorphology and faunal analysis, we demonstrate the anthropogenic origin and antiquity of these sites. In a tropical and geomorphologically active landscape often considered challenging both for early human occupation and for the preservation of hunter-gatherer sites, the newly discovered shell middens provide evidence for early to middle Holocene occupation and illustrate the potential for identifying and interpreting early open-air archaeological sites in western Amazonia. The existence of early hunter-gatherer sites in the Bolivian lowlands sheds new light on the region's past and offers a new context within which the late Holocene "Earthmovers" of the Llanos de Moxos could have emerged.

  2. Coupling Between the Climate Variables of Amazonia and its Surrounding Oceans During Drought Periods.

    NASA Astrophysics Data System (ADS)

    Ramos, Antônio M. de T.; Macau, Elbert E. N.

    2016-04-01

    Teleconnection patterns between different climate systems have been seen as a feature of the internal dynamics of atmosphere and ocean. However several questions about this non-linear dynamics remain open, especially the interplay of the warming of Oceans and the anomaly precipitation in the Amazon region. For this reason, we investigate how the coupling between the ocean's temperature and the precipitation in Amazon evolve in time. In particular, how does this coupling behave during an anomalous drought period in Amazonia. Here a data-driven approach is applied to detect the coupling time scale between the precipitation in the North/South Amazonia and its surrounding oceans. The framework comprises statistical and information theory approaches that can reveal directional links between the different regional domains. The method is applied on a daily resolution data sets, the variables are average over regional domains well studied in the literature. Finally, the outcomes are systematically analysed seeking patterns that may reveal the underlying dynamics between these climate systems. Also, the study sheds light into the elementary form of the climate network between these systems.

  3. Do the recent severe droughts in the Amazonia have the same period of length?

    NASA Astrophysics Data System (ADS)

    Zou, Yong; Macau, Elbert E. N.; Sampaio, Gilvan; Ramos, Antônio M. T.; Kurths, Jürgen

    2016-05-01

    We propose a new measure based on drought period length to assess the temporal difference between the recent two severe droughts of 2005 and 2010 in the Amazonia. The sensitivity of the measure is demonstrated by disclosing the distinct spatial responding mechanisms of the Northeastern and Southwestern Amazon (NA, SA) to the surrounding sea surface temperature (SST) variabilities. The Pacific and Atlantic oceans have different roles on the precipitation patterns in Amazonia. More specifically, the very dry periods in the NA are influenced by El Niño events, while the very dry periods in the SA are affected by the anomalously warming of the SST in the North Atlantic. Our analysis discloses convincingly that the drought 2005 hit SA, which is correlated to the North Atlantic only. Furthermore, it suggests that there are two phases in the drought 2010: (1) it was started in the NA in August 2009 co-occurred with the El Niño event, and (2) later shifted the center of action to SA resulted from anomalously high SST in North Atlantic, which further intensifies the impacts on the spatial coverage.

  4. Meso-scale drivers of forest structure and function in northwestern Amazonia

    NASA Astrophysics Data System (ADS)

    Higgins, M.; Asner, G. P.; Anderson, C.; Martin, R.; Knapp, D. E.; Perez, E.; Elespuru, N.; Alonso, A.

    2013-12-01

    Continent-scale studies of Amazonia have found patterns in forest structure and function corresponding to broad-scale patterns in soil properties. Little information exists at finer scales, however, about how patterns in forest structure, biomass, and canopy chemistry are distributed across Amazonian landscapes, and the underlying drivers of these patterns. Here we used airborne LiDAR and imaging spectroscopy to measure variations in forest structure, biomass, and canopy reflectance for more than 600 km2 of forest in northwestern Amazonia. We combined these data with information on plant species composition and soil properties for 78 sites distributed evenly between two underlying geological formations. We found that soil properties and plant species composition individually explained 70-80% of the variation in biomass in these forests. We further found that these variations in soils and species composition corresponded to profound changes in forest vertical structure. We last found that soil variables and plant species composition explained more than 90% of the variation in canopy chemistry as measured by imaging spectroscopy, resulting in distinct patterns in canopy reflectance. We conclude that soil properties and plant species composition are the dominant drivers of structural and functional patterns in northwestern Amazonian forests over scales of 10s to 100s of kilometers, and that these patterns correspond to underlying geological formations. At broader scales, we anticipate that soil properties and underlying geology provide a scaffold for forest structure and function upon which variations due to climate or distance are superimposed.

  5. Statistical and wavelet analysis of the ATTO experiment in Amazonia rainforest

    NASA Astrophysics Data System (ADS)

    Bolzan, Mauricio

    The study of the turbulence over a roughness surface is the most important subject in exchange of the gases between surface and atmosphere. This fact turns most important over surfaces like the Amazonia rainforest due its importance on local and regional climate. The Amazon Tall Tower Observatory - ATTO started its in February, 2012, with 10 dimensional ultrasonic anemometers bi and tri, in an 80 m tower of height. These anemometers were positioned in 78 m; 70 m; 62 m; 41 m; 57 m; 50 m; 45 m; 36 m; 30 m and 23 m of height and collected data were sampled at 1 Hz, 4 Hz and 10 Hz. The quadrant analysis and Wavelet transform were used to study the behavior of the Coherent Structure (CSs) over the Amazonia forest canopy in different atmospheric stability conditions. The results showed a fairly unique feature of the vertical wind profile near and below the inflection point. According to observations, the geometry of the canopy and terrain contributed to main influences for this aerodynamic effect of wind profile, as well as for the formation of coherent structures like "rolls" on the forest canopy in ATTO-CLAIRE site.

  6. An increase of dry season length over southern Amazonia, its causes and implication to climate projection

    NASA Astrophysics Data System (ADS)

    Fu, R.; Yin, L.

    2013-05-01

    Observations from several independent sources suggest that the dry season length (DSL) has increased over southern Amazonia since 1979, primarily due to a delay of its ending dates (DSE). Whether such a change is entirely due to natural climate variability or a result of combine natural variability and anthropogenic forced change will be assessed through a process-based analysis. The observed changes appear to be greater than those simulated by the global climate models that participated in the Intergovernmental Panel on Climate Change Fifth Assessment Report (IPCC AR5) forced by both historical and future anthropogenic and natural forcing. Such a discrepancy is unlikely due to under-representation of natural variability and more likely due to underestimate the sensitivity of the dry season length to external forcing. Consequently, the climate projections of these models may underestimate the future changes of the dry season length and its impact on rainforests. Our study suggests that it is imperative that monitoring, quantification, and understanding of changes of rainfall seasonality over southern Amazonia be improved.

  7. Brazil's Samuel Dam: lessons for hydroelectric development policy and the environment in Amazonia.

    PubMed

    Fearnside, Philip M

    2005-01-01

    Brazil's Samuel Dam, which formed a 540-km2 reservoir in the state of Rondônia in 1988, provides lessons for development decisions throughout Amazonia and in other tropical areas. The decision to build the dam was heavily influenced by its role in the political strategies of key decision makers. Samuel illustrates both impacts and benefits of electricity supply and the dilemmas facing decision makers regarding the various options for planned electricity generation. Environmental costs included flooding forest and stimulating illegal logging activity throughout western Amazonia because of an exception opened for Samuel in Brazil's prohibition of export of raw logs. Samuel emitted substantially more greenhouse gases than would have been emitted by generating the same amount of electricity from oil. Contamination of fish in the reservoir resulted from methylation of mercury present in the soil. Social costs of the dam included resettlement of 238 families of farmers; impacts on indigenous people were indirect. Mitigating measures included faunal rescue and creation of a forest reserve. The lessons of Samuel include the need to consider a full range of alternatives prior to making decisions in practice and the importance of adhering to the logical sequence of decision making, where information is gathered and compared prior to the decision. It also shows the need to maintain flexibility when the costs and benefits of different alternatives change significantly over the course of the project's planning and execution, as occurred at Samuel.

  8. A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years

    PubMed Central

    Ribas, Camila C.; Aleixo, Alexandre; Nogueira, Afonso C. R.; Miyaki, Cristina Y.; Cracraft, Joel

    2012-01-01

    Many hypotheses have been proposed to explain high species diversity in Amazonia, but few generalizations have emerged. In part, this has arisen from the scarcity of rigorous tests for mechanisms promoting speciation, and from major uncertainties about palaeogeographic events and their spatial and temporal associations with diversification. Here, we investigate the environmental history of Amazonia using a phylogenetic and biogeographic analysis of trumpeters (Aves: Psophia), which are represented by species in each of the vertebrate areas of endemism. Their relationships reveal an unforeseen ‘complete’ time-slice of Amazonian diversification over the past 3.0 Myr. We employ this temporally calibrated phylogeny to test competing palaeogeographic hypotheses. Our results are consistent with the establishment of the current Amazonian drainage system at approximately 3.0–2.0 Ma and predict the temporal pattern of major river formation over Plio-Pleistocene times. We propose a palaeobiogeographic model for the last 3.0 Myr of Amazonian history that has implications for understanding patterns of endemism, the temporal history of Amazonian diversification and mechanisms promoting speciation. The history of Psophia, in combination with new geological evidence, provides the strongest direct evidence supporting a role for river dynamics in Amazonian diversification, and the absence of such a role for glacial climate cycles and refugia. PMID:21795268

  9. The Cotingo Dam as a Test of Brazil's System for Evaluating Proposed Developments in Amazonia

    PubMed

    Fearnside; Barbosa

    1996-09-01

    The proposed Cotingo Dam in Brazil's far northern state of Roraima is examined with the objective of drawing lessons for Brazil's system of evaluating environmental, social, and financial consequences of development decisions. The Cotingo Dam illustrates the difficulty of translating into practice the principles of economic and environmental assessment. Examination of the financial arguments for the Cotingo Dam indicates that justifications in this sphere are insufficient to explain why the project is favored over other alternatives and points to political factors as the best explanation of the project's high priority. Strong pressure from political and entrepreneurial interest groups almost invariably dominates decision making in Amazonia. The analysis indicates the inherent tendency of the present system to produce decisions in favor of large construction projects at the expense of the environment and local peoples. The requirements intended to assure proper weight for these concerns, such as the report on environmental impacts (RIMA) and the public hearing, fail to serve this role. Cotingo also provides a test case for constitutional protections restricting construction of dams in indigenous lands.KEY WORDS: Hydroelectric dams; Amazonia; Indigenous peoples; Brazil; Roraima

  10. Land-use in Amazonia and the Cerrado of Brazil: State of Knowledge and GIS Database

    NASA Technical Reports Server (NTRS)

    Nepstad, Daniel C.

    1997-01-01

    We have assembled datasets to strengthen the LargeScale Biosphere Atmosphere Experiment in Amazonia (LBA). These datasets can now be accessed through the Woods Hole Research Center homepage (www.whrc.org), and will soon be linked to the Pre-LBA homepages of the Brazilian Space Research Institute's Center for Weather and Climate Prediction (Instituto de Pesquisas Espaciais, Centro de Previsao de Tempo e Estudos Climaticos, INPE/CPTEC) and through the Oak Ridge National Laboratory, Distributed Active Archive Center (ORNL/DMC). Some of the datasets that we are making available involved new field research and/or the digitization of data available in Brazilian government agencies. For example, during the grant period we conducted interviews at 1,100 sawmills across Amazonia to determine their production of sawn timber, and their harvest intensities. These data provide the basis for the first quantitative assessment of the area of forest affected each year by selective logging (Nepstad et al, submitted to Nature). We digitized the locations of all of the rural households in the State of Para that have been mapped by the Brazilian malaria combat agency (SUCAM). We also mapped and digitized areas of deforestation in the state of Tocantins, which is comprised largely of savanna (cerrado), an ecosystem that has been routinely excluded from deforestation mapping exercises.

  11. Aerosol transport along the Andes from Amazonia to the remote Pacific Ocean: A multiyear CALIOP assessment

    NASA Astrophysics Data System (ADS)

    Bourgeois, Quentin; Ekman, Annica; Krejci, Radovan

    2015-04-01

    The free troposphere over South America and the Pacific Ocean is a particularly interesting region to study due to the prevailing easterly wind direction, forcing air over Amazonia towards the Pacific Ocean but encountering a natural barrier - the Andes - in between which might play a significant role. In addition, the strong contrast between the wet, relatively clean season and the dry, relatively polluted season as well as the difference between day and night meteorological conditions may influence the vertical distribution of aerosols in the free troposphere. Six years (2007-2012) of CALIOP observations at both day and night were used to investigate the vertical distribution, transport and removal processes of aerosols over South America and the Pacific Ocean. The multiyear assessment shows that aerosols, mainly biomass burning particles emitted during the dry season in Amazonia, may be lifted along the Andes. During their lifting, aerosols remain in the boundary layer which makes them subject to scavenging and deposition processes. The removal aerosol extinction rate was quantified. After reaching the top of the Andes, free tropospheric aerosols are likely pushed by the large-scale subsidence towards the marine boundary layer (MBL) during their transport over the Pacific Ocean. CALIOP observations may indicate that aerosols are transported over thousands of kilometers in the free troposphere over the Pacific Ocean. During their long range transport, aerosols could be entrained into the MBL and may further act as cloud condensation nuclei, and influence climate and the radiative budget of the Earth.

  12. Early and Middle Holocene Hunter-Gatherer Occupations in Western Amazonia: The Hidden Shell Middens

    PubMed Central

    Lombardo, Umberto; Szabo, Katherine; Capriles, José M.; May, Jan-Hendrik; Amelung, Wulf; Hutterer, Rainer; Lehndorff, Eva; Plotzki, Anna; Veit, Heinz

    2013-01-01

    We report on previously unknown early archaeological sites in the Bolivian lowlands, demonstrating for the first time early and middle Holocene human presence in western Amazonia. Multidisciplinary research in forest islands situated in seasonally-inundated savannahs has revealed stratified shell middens produced by human foragers as early as 10,000 years ago, making them the oldest archaeological sites in the region. The absence of stone resources and partial burial by recent alluvial sediments has meant that these kinds of deposits have, until now, remained unidentified. We conducted core sampling, archaeological excavations and an interdisciplinary study of the stratigraphy and recovered materials from three shell midden mounds. Based on multiple lines of evidence, including radiocarbon dating, sedimentary proxies (elements, steroids and black carbon), micromorphology and faunal analysis, we demonstrate the anthropogenic origin and antiquity of these sites. In a tropical and geomorphologically active landscape often considered challenging both for early human occupation and for the preservation of hunter-gatherer sites, the newly discovered shell middens provide evidence for early to middle Holocene occupation and illustrate the potential for identifying and interpreting early open-air archaeological sites in western Amazonia. The existence of early hunter-gatherer sites in the Bolivian lowlands sheds new light on the region’s past and offers a new context within which the late Holocene “Earthmovers” of the Llanos de Moxos could have emerged. PMID:24013964

  13. Outstanding insecurities concerning the use of an Ov16-based ELISA in the Amazonia onchocerciasis focus.

    PubMed

    Luz, Sérgio Luiz Bessa; Crainey, James Lee; Shelley, Anthony John; Rubio, Miguel

    2014-07-01

    In a recent issue of Memórias do Instituto Oswaldo Cruz, published in Rio de Janeiro in February 2014 (109: 87-92), Adami et al. have published a survey reporting Mansonella parasite prevalence in the Amazon Region. This report makes a useful contribution to the existing knowledge of filarial parasite distribution within the Amazon area, parasite prevalence rates in relation to age and occupation and provides observations on the possible clinical impact of Mansonella ozzardi. Their publication also provides an account of what appears to be a novel ELISA that has recently been used in the Simuliidae and Onchocerciasis Laboratory of the Oswaldo Cruz Institute, Rio de Janeiro, Brazil. We are concerned that the publication of this ELISA may have created an excessively positive impression of the effectiveness of the onchocerciasis recrudescence serological surveillance tools that are presently available for use in the Amazonia onchocerciasis focus. In this letter we have, thus, sought to highlight some of the limitations of this ELISA and suggest how continuing insecurities concerning the detection of antibodies to Onchocerca volvulus within the Amazonia onchocerciasis focus might be minimised.

  14. Understorey fire frequency and the fate of burned forests in southern Amazonia.

    PubMed

    Morton, D C; Le Page, Y; DeFries, R; Collatz, G J; Hurtt, G C

    2013-06-05

    Recent drought events underscore the vulnerability of Amazon forests to understorey fires. The long-term impact of fires on biodiversity and forest carbon stocks depends on the frequency of fire damages and deforestation rates of burned forests. Here, we characterized the spatial and temporal dynamics of understorey fires (1999-2010) and deforestation (2001-2010) in southern Amazonia using new satellite-based estimates of annual fire activity (greater than 50 ha) and deforestation (greater than 10 ha). Understorey forest fires burned more than 85 500 km(2) between 1999 and 2010 (2.8% of all forests). Forests that burned more than once accounted for 16 per cent of all understorey fires. Repeated fire activity was concentrated in Mato Grosso and eastern Pará, whereas single fires were widespread across the arc of deforestation. Routine fire activity in Mato Grosso coincided with annual periods of low night-time relative humidity, suggesting a strong climate control on both single and repeated fires. Understorey fires occurred in regions with active deforestation, yet the interannual variability of fire and deforestation were uncorrelated, and only 2.6 per cent of forests that burned between 1999 and 2008 were deforested for agricultural use by 2010. Evidence from the past decade suggests that future projections of frontier landscapes in Amazonia should separately consider economic drivers to project future deforestation and climate to project fire risk.

  15. Eo-1 Hyperion Measures Canopy Drought Stress In Amazonia

    NASA Technical Reports Server (NTRS)

    Asner, Gregory P.; Nepstad, Daniel; Cardinot, Gina; Moutinho, Paulo; Harris, Thomas; Ray, David

    2004-01-01

    The central, south and southeast portions of the Amazon Basin experience a period of decreased cloud cover and precipitation from June through November. There are likely important effects of seasonal and interannual rainfall variation on forest leaf area index, canopy water stress, productivity and regional carbon cycling in the Amazon. While both ground and spaceborne studies of precipitation continue to improve, there has been almost no progress made in observing forest canopy responses to rainfall variability in the humid tropics. This shortfall stems from the large stature of the vegetation and great spatial extent of tropical forests, both of which strongly impede field studies of forest responses to water availability. Those few studies employing satellite measures of canopy responses to seasonal and interannual drought (e.g., Bohlman et al. 1998, Asner et al. 2000) have been limited by the spectral resolution and sampling available from Landsat and AVHRR sensors. We report on a study combining the first landscape-level, managed drought experiment in Amazon tropical forest with the first spaceborne imaging spectrometer observations of this experimental area. Using extensive field data on rainfall inputs, soil water content, and both leaf and canopy responses, we test the hypothesis that spectroscopic signatures unique to hyperspectral observations can be used to quantify relative differences in canopy stress resulting from water availability.

  16. Hematology of the Red-capped parrot (Pionopsitta pileata) and Vinaceous Amazon parrot (Amazona vinacea) in captivity.

    PubMed

    Schmidt, Elizabeth Moreira dos Santos; Lange, Rogério Ribas; Ribas, Janaciara Moreira; Daciuk, Bárbara Maria; Montiani-Ferreira, Fabiano; Paulillo, Antonio Carlos

    2009-03-01

    Preliminary reference intervals for hematologic and total plasma protein profiles were determined for nine adult Red-capped parrots (Pionopsitta pileata) (six males and three females) and six Vinaceous Amazon parrots (Amazona vinacea) (two adult males, two adult females, one juvenile, and one nonsexed) from the Curitiba Zoo, Paraná, Brazil. For both Red-capped parrots and Vinaceous Amazon parrots, adult males had higher red blood cell counts than adult females. Regarding white blood cell distribution, differences due to gender were also found for both species of parrots.

  17. T-cell chronic lymphocytic leukemia in a double yellow-headed Amazon parrot (Amazona ochrocephala oratrix).

    PubMed

    Osofsky, Anna; Hawkins, Michelle G; Foreman, Oded; Kent, Michael S; Vernau, William; Lowenstine, Linda J

    2011-12-01

    An adult, male double yellow-headed Amazon parrot (Amazona ochrocephala oratrix) was diagnosed with chronic lymphocytic leukemia based on results of a complete blood cell count and cytologic examination of a bone marrow aspirate. Treatment with oral chlorambucil was attempted, but no response was evident after 40 days. The bird was euthanatized, and the diagnosis of chronic lymphocytic leukemia was confirmed on gross and microscopic examination of tissues. Neoplastic lymphocytes were found in the bone marrow, liver, kidney, testes, and blood vessels. Based on CD3-positive immunocytochemical and immunohistochemical immunophenotyping, the chronic lymphocytic leukemia was determined to be of T-cell origin.

  18. Microbial diversity of soils on the banks of the Solimões and Negro rivers, state of Amazonas, Brazil

    PubMed Central

    da Costa da Santos, Ellen Karla Nobrex; Honda, Rubens Tomio; Nozawa, Sérgio Ricardo; Ferreira-Nozawa, Monica Stropa

    2012-01-01

    Analysis of bacterial diversity in soils along the banks of the Solimões and Negro rivers, state of Amazonas, Brazil, was by partial sequencing of the genes codifying the rDNA16S region. Diversity of operational taxonomic units (OTU) and of the divergent sequences obtained were applied in comparative analysis of microbiological diversity in the two environments, based on richness estimators and OTU diversity indices. The higher OTU diversity in the Solimões was based on the higher number of parameters that evoke this. The interaction between the nucleotide sequences of bacteria inhabiting the two riverine environments indicated that the two microrganism communities are similar in composition. PMID:22481886

  19. Behavioral response of Anopheles darlingi to DDT-sprayed house walls in Amazonia.

    PubMed

    Roberts, D R; Alecrim, W D

    1991-01-01

    The behavioral response of Anopheles darlingi females to spraying of house walls with DDT was studied along the Ituxi River in Amazonas, Brazil, using a house sprayed with 2 g DDT per square meter of wall surface and an untreated house serving as a control. It was found that hardly any An. darlingi females entered, exited, or took blood meals inside the treated house after it was sprayed with DDT, and that specimens marked and released inside the house tended to depart immediately. This behavior appears to constitute true repellency rather than contact irritability. Since the typical house in the vicinity of the study site had only two walls, the persistence of malaria in the local area was probably due to home construction practices.

  20. Non-Invasive Measurement of Adrenocortical Activity in Blue-Fronted Parrots (Amazona aestiva, Linnaeus, 1758)

    PubMed Central

    Ferreira, João C. P.; Fujihara, Caroline J.; Fruhvald, Erika; Trevisol, Eduardo; Destro, Flavia C.; Teixeira, Carlos R.; Pantoja, José C. F.; Schmidt, Elizabeth M. S.; Palme, Rupert

    2015-01-01

    Parrots kept in zoos and private households often develop psychological and behavioural disorders. Despite knowing that such disorders have a multifactorial aetiology and that chronic stress is involved, little is known about their development mainly due to a poor understanding of the parrots’ physiology and the lack of validated methods to measure stress in these species. In birds, blood corticosterone concentrations provide information about adrenocortical activity. However, blood sampling techniques are difficult, highly invasive and inappropriate to investigate stressful situations and welfare conditions. Thus, a non-invasive method to measure steroid hormones is critically needed. Aiming to perform a physiological validation of a cortisone enzyme immunoassay (EIA) to measure glucocorticoid metabolites (GCM) in droppings of 24 Blue-fronted parrots (Amazona aestiva), two experiments were designed. During the experiments all droppings were collected at 3-h intervals. Initially, birds were sampled for 24 h (experiment 1) and one week later assigned to four different treatments (experiment 2): Control (undisturbed), Saline (0.2 mL of 0.9% NaCl IM), Dexamethasone (1 mg/kg IM) and Adrenocorticotropic hormone (ACTH; 25 IU IM). Treatments (always one week apart) were applied to all animals in a cross-over study design. A daily rhythm pattern in GCM excretion was detected but there were no sex differences (first experiment). Saline and dexamethasone treatments had no effect on GCM (not different from control concentrations). Following ACTH injection, GCM concentration increased about 13.1-fold (median) at the peak (after 3–9 h), and then dropped to pre-treatment concentrations. By a successful physiological validation, we demonstrated the suitability of the cortisone EIA to non-invasively monitor increased adrenocortical activity, and thus, stress in the Blue-fronted parrot. This method opens up new perspectives for investigating the connection between behavioural

  1. HIV/AIDS epidemic in the State of Amazonas: characteristics and trends from 2001 to 2012.

    PubMed

    Oliveira, Romina do Socorro Marques de; Benzaken, Adele Schwartz; Saraceni, Valeria; Sabidó, Meritxell

    2015-01-01

    A scoping review was conducted to describe the epidemiological characteristics of the human immunodeficiency virus/acquired immunodeficiency syndrome (HIV/AIDS) epidemic in the State of Amazonas, Brazil, from 2001 to 2012, and temporary patterns were estimated from surveillance data. The results suggest that in its third decade, the Amazon HIV/AIDS epidemic is far from being stabilized and displays rising AIDS incidence and mortality rates and late diagnoses. The data suggest that AIDS cases are hitting mostly young adults and have recently shifted toward men, both homosexual and heterosexual. AIDS cases among the indigenous people have remained stable and low. However, the epidemic has disseminated to the interior of the state, which adds difficulties to its control, given the geographical isolation, logistical barriers, and culturally and ethnically diverse population. Antiretroviral (ARV) therapy has been decentralized, but peripheral ARV services are still insufficient and too distant from people who need them. Recently, the expansion of point-of-care (POC) rapid HIV testing has been contributing to overcoming logistical barriers. Other new POC devices, such as the PIMA CD4 analyzer, will bring the laboratory to the patient. AIDS uniquely coexists with other tropical infections, sharing their epidemiological profiles. The increased demand for HIV/AIDS care services can only be satisfied through increased decentralization to peripheral health units, which can also naturally integrate care with other tropical infections and can promote a shift from vertical to integrated programming. Future challenges involve building surveillance data on HIV case notification and covering the spectrum of engagement in care, including adherence to treatment and follow-up loss.

  2. HEALTH-SCREENING PROTOCOLS FOR VINACEOUS AMAZONS (AMAZONA VINACEA) IN A REINTRODUCTION PROJECT.

    PubMed

    Saidenberg, André B S; Zuniga, Eveline; Melville, Priscilla A; Salaberry, Sandra; Benites, Nilson R

    2015-12-01

    Reintroduction is a growing field in the conservation of endangered species. The vinaceous Amazon parrot (Amazona vinacea) is extinct in several areas, and a project to release confiscated individuals to their former range is currently underway. The objective of this study was to evaluate and improve the selection and treatment of individual release candidates by detecting possible pathogen carriers using samples taken before and during release. As part of prerelease health protocols, samples were obtained from 29 parrots on three different occasions while in captivity and once after their release. Samples were screened for paramyxovirus type 1, avian influenza, poxvirus, coronavirus, psittacine herpesvirus 1, Chlamydia psittaci , enteropathogenic Escherichia coli (EPEC), Salmonella spp., and endoparasites. The majority of samples returned negative results, with the exception of two individuals that tested positive for C. psittaci in the first sampling and for Ascaridia spp. in the second pooled sampling. Treatments for C. psittaci and endoparasites were administered prior to release, and negative results were obtained in subsequent exams. The number of positive results for E. coli (non-EPEC) decreased during the rehabilitation period. Adequate quarantine procedures and health examinations greatly minimize disease risks. The protocols employed in this study resulted in acceptable health status in accordance with current environmental legislation in Brazil. Additionally, protocols allowed informed decisions to release candidates, minimized risks, and favored the selection of healthy individuals, thereby contributing to the recovery of this species. It is important to determine appropriate minimum health-screening protocols when advanced diagnostics may not be available or high costs make the tests prohibitive in countries where confiscations occur. We hypothesize that a minimum panel of tests of pooled samples can serve as an alternative approach that minimizes

  3. Non-Invasive Measurement of Adrenocortical Activity in Blue-Fronted Parrots (Amazona aestiva, Linnaeus, 1758).

    PubMed

    Ferreira, João C P; Fujihara, Caroline J; Fruhvald, Erika; Trevisol, Eduardo; Destro, Flavia C; Teixeira, Carlos R; Pantoja, José C F; Schmidt, Elizabeth M S; Palme, Rupert

    2015-01-01

    Parrots kept in zoos and private households often develop psychological and behavioural disorders. Despite knowing that such disorders have a multifactorial aetiology and that chronic stress is involved, little is known about their development mainly due to a poor understanding of the parrots' physiology and the lack of validated methods to measure stress in these species. In birds, blood corticosterone concentrations provide information about adrenocortical activity. However, blood sampling techniques are difficult, highly invasive and inappropriate to investigate stressful situations and welfare conditions. Thus, a non-invasive method to measure steroid hormones is critically needed. Aiming to perform a physiological validation of a cortisone enzyme immunoassay (EIA) to measure glucocorticoid metabolites (GCM) in droppings of 24 Blue-fronted parrots (Amazona aestiva), two experiments were designed. During the experiments all droppings were collected at 3-h intervals. Initially, birds were sampled for 24 h (experiment 1) and one week later assigned to four different treatments (experiment 2): Control (undisturbed), Saline (0.2 mL of 0.9% NaCl IM), Dexamethasone (1 mg/kg IM) and Adrenocorticotropic hormone (ACTH; 25 IU IM). Treatments (always one week apart) were applied to all animals in a cross-over study design. A daily rhythm pattern in GCM excretion was detected but there were no sex differences (first experiment). Saline and dexamethasone treatments had no effect on GCM (not different from control concentrations). Following ACTH injection, GCM concentration increased about 13.1-fold (median) at the peak (after 3-9 h), and then dropped to pre-treatment concentrations. By a successful physiological validation, we demonstrated the suitability of the cortisone EIA to non-invasively monitor increased adrenocortical activity, and thus, stress in the Blue-fronted parrot. This method opens up new perspectives for investigating the connection between behavioural

  4. Pharmacokinetics of single oral dose of pimobendan in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Guzman, David Sanchez-Migallon; Beaufrère, Hugues; KuKanich, Butch; Barker, Steven A; Brandão, João; Paul-Murphy, Joanne; Tully, Thomas N

    2014-06-01

    Pimobendan is a phosphodiesterase (PDE) inhibitor and calcium sensitizer with inotropic, lusitropic, and rasodilator properties used in the treatment of congestive heart failure. The mechanism of action is by inhibition of PDE III and V and by increasing intracellular calcium sensitivity in the cardiac myocardium. Pharmacokinetic and pharmacodynamic studies have been published in humans, dogs, and cats, but there are no studies in avian species. Pimobendan has been used in birds at the empirical dosage of 0.25 mg/kg q12h. To determine the pharmacokinetic parameters of pimobendan in Hispaniolan Amazon parrots (Amazona ventralis), 3 pilot studies with 2 birds, each receiving 1, 3, and 10 mg/kg PO, provided the basis for the pivotal trials with 6 birds, each receiving 10 mg/kg PO using 2 different suspensions. Blood samples were obtained at 0, 0.5, 1, 1.5, 2, 3, 4, 8, 12, and 18 hours after drug administration. Plasma concentrations were determined by liquid chromatography-tandem mass spectrometry (HPLC/MS) by use of electrospray ionization. Because of the erratic and low concentrations of pimobendan, pharmacokinetic parameters were calculated using naive averaged analysis. Plasma concentrations after commercial pimobendan tablet suspension at 10 mg/kg reached a Cmax of 8.26 ng/mL at 3 hours with a terminal half-life of 2.1 hours, while concentrations after the bulk chemical suspension reached a Cmax of 1.28 ng/mL at 12 hours and had a terminal half-life of 2.3 hours. Further studies evaluating the effect of oral pimobendan in parrots are needed.

  5. Isolation of Salmonella enterica serovar Enteritidis in blue-fronted Amazon parrot (Amazona aestiva).

    PubMed

    Marietto-Gonçalves, Guilherme Augusto; de Almeida, Sílvia Maria; de Lima, Edna Tereza; Okamoto, Adriano Sakai; Pinczowski, Pedro; Andreatti Filho, Raphael Lucio

    2010-03-01

    Avian salmonellosis is a disease caused by bacteria of the genus Salmonella that can cause three distinct diseases in birds: pullorum diseases, fowl typhoid, and paratyphoid infection. Various wildlife species are susceptible to infections by Salmonella, regardless of whether they live in captivity or freely in the wild. The present study verified the presence of Salmonella enterica serovar Enteritidis in three captive specimens of Amazona aestiva. The study involved a total of 103 birds undergoing rehabilitation to prepare for living in the wild, after having been captured from animal traffickers and delivered to the Centrofauna Project of the Floravida Institute in Sao Paulo, Brazil. This is the first report of Salmonella Enteritidis isolation in A. aestiva that originated from capture associated with animal trafficking; Salmonella was detected during the study by the serologic method of rapid serum agglutination on a plate with bacterial isolate. The antimicrobial profile exam of the isolated samples demonstrated sensitivity to ampicillin, cefaclor, ciprofloxacin, and cloranfenicol. The three samples also presented resistance to more than four antibiotics. The presence of the genes invA and spvC was verified by PCR technique and was associated with virulence and absence of class 1 integron, a gene related to antimicrobial resistance. The commercial antigen for pullorum disease was shown to be a useful tool for rapid detection in the screening of Salmonella of serogroup D1 in Psittaciformes. New studies on Salmonella carriage in birds involved in trafficking must be performed to better understand their participation in the epidemiologic cycle of salmonellosis in humans and other animals.

  6. Molecular typing of environmental Cryptococcus neoformans/C. gattii species complex isolates from Manaus, Amazonas, Brazil.

    PubMed

    Alves, Gleica Soyan Barbosa; Freire, Ana Karla Lima; Bentes, Amaury Dos Santos; Pinheiro, José Felipe de Souza; de Souza, João Vicente Braga; Wanke, Bodo; Matsuura, Takeshi; Jackisch-Matsuura, Ani Beatriz

    2016-08-01

    Cryptococcus neoformans and Cryptococcus gattii are the main causative agents of cryptococcosis, a systemic fungal disease that affects internal organs and skin, and which is acquired by inhalation of spores or encapsulated yeasts. It is currently known that the C. neoformans/C. gattii species complex has a worldwide distribution, however, some molecular types seem to prevail in certain regions. Few environmental studies of Cryptococcus have been conducted in the Brazilian Amazon. This is the first ecological study of the pathogenic fungi C. neoformans/C. gattii species complex in the urban area of Manaus, Amazonas, Brazil. A total of 506 samples from pigeon droppings (n = 191), captive bird droppings (n = 60) and tree hollows (n = 255) were collected from June 2012 to January 2014 at schools and public buildings, squares, pet shops, households, the zoo and the bus station. Samples were plated on niger seed agar (NSA) medium supplemented with chloramphenicol and incubated at 25°C for 5 days. Dark-brown colonies were isolated and tested for thermotolerance at 37°C, cycloheximide resistance and growth on canavanine-glycine-bromothymol blue agar. Molecular typing was done by PCR-RFLP. Susceptibility to the antifungal drugs amphotericin B, fluconazole, itraconazole and ketoconazole was tested using Etest(®) strips. In total, 13 positive samples were obtained: one tree hollow (C. gattiiVGII), nine pigeon droppings (C. neoformansVNI) and three captive bird droppings (C. neoformansVNI). The environmental cryptococcal isolates found in this study were of the same molecular types as those responsible for infections in Manaus.

  7. Antinociceptive effects after oral administration of tramadol hydrochloride in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Sanchez-Migallon Guzman, David; Souza, Marcy J; Braun, Jana M; Cox, Sherry K; Keuler, Nicholas S; Paul-Murphy, Joanne R

    2012-08-01

    To evaluate antinociceptive effects on thermal thresholds after oral administration of tramadol hydrochloride to Hispaniolan Amazon parrots (Amazona ventralis). Animals-15 healthy adult Hispaniolan Amazon parrots. 2 crossover experiments were conducted. In the first experiment, 15 parrots received 3 treatments (tramadol at 2 doses [10 and 20 mg/kg] and a control suspension) administered orally. In the second experiment, 11 parrots received 2 treatments (tramadol hydrochloride [30 mg/kg] and a control suspension) administered orally. Baseline thermal foot withdrawal threshold was measured 1 hour before drug or control suspension administration; thermal foot withdrawal threshold was measured after administration at 0.5, 1.5, 3, and 6 hours (both experiments) and also at 9 hours (second experiment only). For the first experiment, there were no overall effects of treatment, hour, period, or any interactions. For the second experiment, there was an overall effect of treatment, with a significant difference between tramadol hydrochloride and control suspension (mean change from baseline, 2.00° and -0.09°C, respectively). There also was a significant change from baseline for tramadol hydrochloride at 0.5, 1.5, and 6 hours after administration but not at 3 or 9 hours after administration. Tramadol at a dose of 30 mg/kg, PO, induced thermal antinociception in Hispaniolan Amazon parrots. This dose was necessary for induction of significant and sustained analgesic effects, with duration of action up to 6 hours. Further studies with other types of noxious stimulation, dosages, and intervals are needed to fully evaluate the analgesic effects of tramadol hydrochloride in psittacines.

  8. Effects of dopamine and dobutamine on isoflurane-induced hypotension in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Schnellbacher, Rodney W; da Cunha, Anderson F; Beaufrère, Hugues; Queiroz, Patricia; Nevarez, Javier G; Tully, Thomas N

    2012-07-01

    To assess the effects of dopamine and dobutamine on the blood pressure of isoflurane-anesthetized Hispaniolan Amazon parrots (Amazona ventralis). 8 Hispaniolan Amazon parrots. A randomized crossover study was conducted. Each bird was anesthetized (anesthesia maintained by administration of 2.5% isoflurane in oxygen) and received 3 doses of each drug during a treatment period of 20 min/dose. Treatments were constant rate infusions (CRIs) of dobutamine (5, 10, and 15 μg/kg/min) and dopamine (5, 7, and 10 μg/kg/min). Direct systolic, diastolic, and mean arterial pressure measurements, heart rate, esophageal temperature, and end-tidal partial pressure of CO(2) were recorded throughout the treatment periods. Mean ± SD of the systolic, mean, and diastolic arterial blood pressures at time 0 (initiation of a CRI) were 132.9 ± 22.1 mm Hg, 116.9 ± 20.5 mm Hg, and 101.9 ± 22.0 mm Hg, respectively. Dopamine resulted in significantly higher values than did dobutamine for the measured variables, except for end-tidal partial pressure of CO(2). Post hoc multiple comparisons revealed that the changes in arterial blood pressure were significantly different 4 to 7 minutes after initiation of a CRI. Overall, dopamine at rates of 7 and 10 μg/kg/min and dobutamine at a rate of 15 μg/kg/min caused the greatest increases in arterial blood pressure. Dobutamine CRI at 5, 10, and 15 μg/kg/min and dopamine CRI at 5, 7, and 10 μg/kg/min may be useful in correcting severe hypotension in Hispaniolan Amazon parrots caused by anesthesia maintained with 2.5% isoflurane.

  9. Antinociceptive effects of nalbuphine hydrochloride in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Sanchez-Migallon Guzman, David; KuKanich, Butch; Keuler, Nicholas S; Klauer, Julia M; Paul-Murphy, Joanne R

    2011-06-01

    To evaluate the antinociceptive effects and duration of action of nalbuphine HCl administered IM on thermal thresholds in Hispaniolan Amazon parrots (Amazona ventralis). 14 healthy adult Hispaniolan Amazon parrots of unknown sex. 3 doses of nalbuphine (12.5, 25, and 50 mg/kg, IM) and saline (0.9% NaCl) solution (control treatment) were evaluated in a blinded complete crossover experimental design by use of foot withdrawal threshold to a noxious thermal stimulus. Baseline data on thermal threshold were generated 1 hour before administration of nalbuphine or saline solution; thermal threshold measurements were obtained 0.5, 1.5, 3, and 6 hours after administration. Nalbuphine administered IM at 12.5 mg/kg significantly increased the thermal threshold (mean change, 2.4°C), compared with results for the control treatment, and significantly changed thermal threshold for up to 3 hours, compared with baseline results (mean change, 2.6° to 3.8°C). Higher doses of nalbuphine did not significantly change thermal thresholds, compared with results for the control treatment, but had a significant effect, compared with baseline results, for up to 3 and 1.5 hours after administration, respectively. Nalbuphine administered IM at 12.5 mg/kg significantly increased the foot withdrawal threshold to a thermal noxious stimulus in Hispaniolan Amazon parrots. Higher doses of nalbuphine did not result in significantly increased thermal thresholds or a longer duration of action and would be expected to result in less analgesic effect than lower doses. Further studies are needed to fully evaluate the analgesic effects of nalbuphine in psittacine species.

  10. B-mode ultrasonography biometry of the Amazon Parrot (Amazona aestiva) eye.

    PubMed

    Lehmkuhl, Ricardo C; Almeida, Mariana F; Mamprim, Maria J; Vulcano, Luiz C

    2010-09-01

    Ultrasonographic evaluation of the eye is a relatively recent addition to routine ophthalmic diagnostics in small animal ophthalmology. Some parameters for ophthalmic biometry have been established. There are few studies in clinical avian ophthalmology that describe ultrasound images of eye in some nocturnal avian species and in other birds that do not belong to the Brazilian fauna, but the psittacine family is not represented. The purpose of this study was to describe the following measurements: the distances between cornea and anterior lens capsule (D1) between the anterior and posterior lens capsule (D2), between posterior lens capsule and optic papilla (D3) and the axial length. Sixty four transpalpebral ocular ultrasound examinations were performed on 32 Blue fronted Amazon parrots (Amazona aestiva) with no history of previous ophthalmic disease. The measurements were taken in sagital planes using a 10 MHz linear probe without a standoff pad. The mean values for the left eye were; D1 0.17 ± 0.03 cm, D2 0.35 ± 0.02 cm, D3 0.73 ± 0.04 cm and the axial length 1.26 ± 0.06 cm. In the right eye D1 0.17 ± 0.02 cm, D2 0.34 ± 0.02 cm, D3 0.74 ± 0.03 cm and the axial length 1.25 ± 0.05 cm. No significant statistical difference was observed among the birds or between the left and right eye. The description of these parameters will allow the veterinary practitioner to evaluate the structural changes that specific diseases may cause in these animals.

  11. Pharmacokinetics of repeated oral administration of tramadol hydrochloride in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Souza, Marcy J; Gerhardt, Lillian; Cox, Sherry

    2013-07-01

    To determine the pharmacokinetics of tramadol hydrochloride (30 mg/kg) following twice-daily oral administration in Hispaniolan Amazon parrots (Amazona ventralis). 9 healthy adult Hispaniolan Amazon parrots. Tramadol hydrochloride was administered to each parrot at a dosage of 30 mg/kg, PO, every 12 hours for 5 days. Blood samples were collected just prior to dose 2 on the first day of administration (day 1) and 5 minutes before and 10, 20, 30, 60, 90, 180, 360, and 720 minutes after the morning dose was given on day 5. Plasma was harvested from blood samples and analyzed by high-performance liquid chromatography. Degree of sedation was evaluated in each parrot throughout the study. No changes in the parrots' behavior were observed. Twelve hours after the first dose was administered, mean ± SD concentrations of tramadol and its only active metabolite M1 (O-desmethyltramadol) were 53 ± 57 ng/mL and 6 ± 6 ng/mL, respectively. At steady state following 4.5 days of twice-daily administration, the mean half-lives for plasma tramadol and M1 concentrations were 2.92 ± 0.78 hours and 2.14 ± 0.07 hours, respectively. On day 5 of tramadol administration, plasma concentrations remained in the therapeutic range for approximately 6 hours. Other tramadol metabolites (M2, M4, and M5) were also present. On the basis of these results and modeling of the data, tramadol at a dosage of 30 mg/kg, PO, will likely need to be administered every 6 to 8 hours to maintain therapeutic plasma concentrations in Hispaniolan Amazon parrots.

  12. Mucoepidermoid Carcinoma in the Skull of an Orange-winged Amazon Parrot (Amazona amazonica).

    PubMed

    Nau, Melissa R; Carpenter, James W; Lin, Denise; Narayanan, Sanjeev; Hallman, Mackenzie

    2017-09-01

    A 33-year-old female intact orange-winged Amazon parrot (Amazona amazonica) presented for a slowly growing mass over the right eye. A computed tomography scan performed with and without intravenous contrast revealed a heterogeneous mixed soft tissue and mineral-dense mass with a small area of non-contrast-enhancing fluid density located between the orbits at the caudal aspect of the nasal passages, with associated lysis of the right caudal nasal passage and the right frontal bone. Following euthanasia, the mass was found to consist of soft tissue between the right eye and nostril over the right frontal bone. Lysis of the underlying bone resulted in a bony defect leading into the infraorbital sinus along the dorsorostral aspect of the right eye. Histopathology revealed an unencapsulated, poorly demarcated, highly cellular neoplasm composed of islands and trabeculae of neoplastic cells embedded in abundant loose fibrovascular stroma which completely obliterated the cortical bone and sinuses of the rostral skull and infiltrated the surrounding muscle and soft tissue. Histologically, the tumor was consistent with a high-grade mucoepidermoid carcinoma, characterized by the presence of epidermoid, intermediate, and mucous-producing cell types. No evidence of metastasis was identified. The tissue of origin was suspected to be salivary or nasal mucous glands, but was difficult to confirm due to distortion of normal tissue architecture as a result of the tumor. Although mucoepidermoid carcinomas are a common salivary gland tumor in human medicine, they are not well recognized in avian species, and no specific case reports exist describing this pathology in an Amazon parrot. Despite the lack of distinct salivary glands in most avian species, mucoepidermoid carcinomas can occur, can cause significant clinical disease, and should be included as a differential diagnosis for avian patients presenting with similar lesions.

  13. Does syntax contribute to the function of duets in a parrot, Amazona auropalliata?

    PubMed

    Dahlin, Christine R; Wright, Timothy F

    2012-07-01

    Complex acoustic signals in many animal species are characterized by a syntax that governs how different notes are combined, but the importance of syntax to the communicative function of signals is not well understood. Mated pairs of yellow-naped amazons, Amazona auropalliata, produce coordinated vocal duets that are used for territory maintenance and defense. These duets follow rules that specify the ordering of notes within duets, such as a strict alternation of sex-specific notes and a defined progression of note types through each duet. These syntactical rules may function to define sex-specific roles, improve coordination, and allow individuals to combine calls into meaningful sequences. As a first step toward understanding the functional significance of syntax, we conducted two separate audio playback experiments in which we presented nesting pairs with normal duets and duets with broken syntax (i.e., one of the syntactic rules was broken). In Experiment One, we reversed the order of female and male notes within note pairs while retaining the typical progression of note types through a duet. In Experiment Two we reversed the order of note types across a whole duet while retaining the typical female-male ordering within note pairs. We hypothesized that duets with broken syntax would be less-effective signals than duets with normal syntax and predicted that pairs would respond less to broken syntax than to normal duets. Contrary to predictions, we did not observe differences in response between treatments for any variables except latency to approach the speaker. After we combined data across experiments post hoc, we observed longer latencies to approach the speakers after playbacks of broken syntax duets, suggesting that pairs could differentiate between playbacks. These responses suggest that breaking one rule of duet syntax at a time does not result in detectable loss of signal efficacy in the context of territorial intrusions.

  14. Multi year aerosol characterization in the tropical Andes and in adjacent Amazonia using AERONET measurements

    NASA Astrophysics Data System (ADS)

    Pérez-Ramírez, Daniel; Andrade-Flores, Marcos; Eck, Thomas F.; Stein, Ariel F.; O'Neill, Norman T.; Lyamani, Hassan; Gassó, Santiago; Whiteman, David N.; Veselovskii, Igor; Velarde, Fernando; Alados-Arboledas, L.

    2017-10-01

    This work focuses on the analysis of columnar aerosol properties in the complex geophysical tropical region of South America within 10-20° South and 50-70° West. The region is quite varied and encompasses a significant part of Amazonia (lowlands) as well as high mountains in the Andes (highlands,∼4000 m a.s.l.). Several AERONET stations were included to study the aerosol optical characteristics of the lowlands (Rio Branco, Ji Parana and Cuiaba in Brazil and Santa Cruz in Bolivia) and the highlands (La Paz, Bolivia) during the 2000-2014 period. Biomass-burning is by far the most important source of aerosol in the lowlands, particularly during the dry season (August-October). Multi-annual variability was investigated and showed very strong burning activity in 2005, 2006, 2007 and 2010. This resulted in smoke characterized by correspondingly strong, above-average AODs (aerosol optical depths) and homogeneous single scattering albedo (SSA) across all the stations (∼0.93). For other years, however, SSA differences arise between the northern stations (Rio Branco and Ji Parana) with SSAs of ∼0.95 and the southern stations (Cuiaba and Santa Cruz) with lower SSAs of ∼0.85. Such differences are explained by the different types of vegetation burned in the two different regions. In the highlands, however, the transport of biomass burning smoke is found to be sporadic in nature. This sporadicity results in highly variable indicators of aerosol load and type (Angstrom exponent and fine mode fraction) with moderately significant increases in both. Regional dust and local pollution are the background aerosol in this highland region, whose elevation places it close to the free troposphere. Transported smoke particles were generally found to be more optical absorbing than in the lowlands: the hypothesis to explain this is the significantly higher amount of water vapor in Amazonia relative to the high mountain areas. The air-mass transport to La Paz was investigated using

  15. The Greatest Legacy of the Large Scale Biosphere Atmosphere Experiment in Amazonia (LBA): A Bibliometric Assessment

    NASA Astrophysics Data System (ADS)

    Keller, M. M.

    2015-12-01

    The Large Scale Biosphere Atmosphere Experiment in Amazonia (LBA) is an international continental scale effort led by Brazil to understand how land use change and climate change affects the role of Amazonia in the Earth system. During the first decade of studies (1998-2007), LBA researchers generated new understanding of Amazonia and published over 1000 papers. However, most LBA participants agree that training and education of a large cohort of scientists, especially students from Brazil, was the greatest contribution of LBA. I analyzed bibliographic data from the NASA supported component project known as LBA-ECO. This component covered a large cross-section of the LBA subject areas highlighting land use and land cover change, carbon cycling, nutrient cycling and other aspects of terrestrial and aquatic ecology. I reviewed the complete bibliography of peer-reviewed papers reported by LBA-ECO researchers (http://www.lbaeco.org/cgi-bin/web/investigations/lbaeco_refs.pl). The researchers reported 691 contributions from 1996 through 2013 of which 24 were theses that were removed them from further analysis. Of 667 papers and book chapters, I tallied the first authors separating categories for Brazilians, all students, and Brazilian students. Numerically, LBA-ECO production of papers peaked in 2004. Publication by Brazilians, students, and Brazilian students generally followed the same pattern as publication in general. However, student and Brazilian student contributions as first authors showed clearly increasing proportions of the papers from project initiation through peak publication. Brazilian student participation as first authors averaged more than 20% of all publications from 2003 to 2010 and more than half of all student publications had Brazilians as first authors. Foreign researchers, some initially reluctant to invest in Brazilian students, almost universally adapted the belief that the greatest legacy of LBA would be the contribution to building a cadre of

  16. Assessment of continuous oil and gas resources of Solimões, Amazonas, and Parnaíba Basin Provinces, Brazil, 2016

    USGS Publications Warehouse

    Schenk, Christopher J.; Tennyson, Marilyn E.; Klett, Timothy R.; Finn, Thomas M.; Mercier, Tracey J.; Hawkins, Sarah J.; Gaswirth, Stephanie B.; Marra, Kristen R.; Brownfield, Michael E.; Le, Phuong A.; Leathers-Miller, Heidi M.

    2017-03-27

    Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean continuous resources of 5 billion barrels of oil and 47 trillion cubic feet of gas in the Paleozoic Solimões, Amazonas, and Parnaíba Basin Provinces, Brazil. 

  17. Simulating deforestation and carbon loss in Amazonia: impacts in Brazil's Roraima state from reconstructing Highway BR-319 (Manaus-Porto Velho).

    PubMed

    Barni, Paulo Eduardo; Fearnside, Philip Martin; Graça, Paulo Maurício Lima de Alencastro

    2015-02-01

    Reconstruction of Highway BR-319 (Manaus-Porto Velho) would allow for access from the "arc of deforestation" in the southern part of Brazil's Amazon region to vast blocks of forests in central and northern Amazonia. Building roads is known to be a major driver of deforestation, allowing entry of squatters, and other actors. Rather than deforestation along the highway route, here we consider the road's potential for stimulating deforestation in a separate location, approximately 550 km north of BR-319's endpoint in Manaus. Reconstructing BR-319 has great potential impact to start a new wave of migration to this remote region. The southern portion of the state of Roraima, the focus of our study, is already connected to Manaus by Highway BR-174. We modeled deforestation in southern Roraima and simulated carbon emissions between 2007 and 2030 under four scenarios. Simulations used the AGROECO model in DINAMICA-EGO © software. Two scenarios were considered with reconstruction of BR-319 and two without this road connection. For each of the two possibilities regarding BR-319, simulations were developed for (1) a "conservation" (CONSERV) scenario that assumes the creation of a series of protected areas, and (2) a "business-as-usual" (BAU) scenario that assumes no additional protected areas. Results show that by 2030, with BR-319 rebuilt, deforestation carbon emissions would increase between 19% (CONSERV) and 42% (BAU) over and above those corresponding to no-road scenarios.

  18. Simulating Deforestation and Carbon Loss in Amazonia: Impacts in Brazil's Roraima State from Reconstructing Highway BR-319 (Manaus-Porto Velho)

    NASA Astrophysics Data System (ADS)

    Barni, Paulo Eduardo; Fearnside, Philip Martin; Graça, Paulo Maurício Lima de Alencastro

    2015-02-01

    Reconstruction of Highway BR-319 (Manaus-Porto Velho) would allow for access from the "arc of deforestation" in the southern part of Brazil's Amazon region to vast blocks of forests in central and northern Amazonia. Building roads is known to be a major driver of deforestation, allowing entry of squatters, and other actors. Rather than deforestation along the highway route, here we consider the road's potential for stimulating deforestation in a separate location, approximately 550 km north of BR-319's endpoint in Manaus. Reconstructing BR-319 has great potential impact to start a new wave of migration to this remote region. The southern portion of the state of Roraima, the focus of our study, is already connected to Manaus by Highway BR-174. We modeled deforestation in southern Roraima and simulated carbon emissions between 2007 and 2030 under four scenarios. Simulations used the AGROECO model in DINAMICA-EGO software. Two scenarios were considered with reconstruction of BR-319 and two without this road connection. For each of the two possibilities regarding BR-319, simulations were developed for (1) a "conservation" (CONSERV) scenario that assumes the creation of a series of protected areas, and (2) a "business-as-usual" (BAU) scenario that assumes no additional protected areas. Results show that by 2030, with BR-319 rebuilt, deforestation carbon emissions would increase between 19 % (CONSERV) and 42 % (BAU) over and above those corresponding to no-road scenarios.

  19. A new eimerian species (Apicomplexa: Eimeriidae) from the blue-fronted Amazon parrot Amazona aestiva L. (Aves: Psittacidae) in Brazil.

    PubMed

    Hofstatter, P G; Guaraldo, A M A

    2011-12-01

    The Neotropical psittacine species Amazona aestiva, commonly known as the blue-fronted Amazon, is one of the most common and best-known psittacine birds kept as a pet worldwide. However, very little is known about the diseases or parasites of these birds. In this study, we describe a new species, Eimeria aestivae, associated with these parrots. The new species is characterized by: ovoid smooth oocysts (n  =  60), 36.8 (33.2-41.5) × 23.7 (21.7-25.7) µm, length/width ratio  =  1.55; polar granule present; ellipsoidal sporocysts (n  =  25), 19.8 (17.5-21.6) × 9.3 (8.3-9.9) µm; Stieda, sub-Stieda body, and sporocyst residuum present. Sporozoites (n  =  20), 2 per sporocyst, elongate and curved, 17.6 (15.8-19.2) × 3.8 (3.2-4.8) µm; each with 2 refractile bodies. The oocysts of the other 2 eimerian species described for Amazona are larger than those of the presented species, but they all seem to be closely related because of some similarities among them.

  20. Two new Eimeria species (Apicomplexa: Eimeriidae) from the yellow-crowned Amazon Amazona ochrocephala (Aves: Psittacidae) in Brazil.

    PubMed

    Hofstatter, P G; Kawazoe, U

    2011-06-01

    In this study, we describe 2 new species of Eimeria associated with the yellow-crowned Amazon Amazona ochrocephala. Eimeria amazonae n. sp. has bilayered, ellipsoidal, and smooth oocysts that measure 48.9 × 36.2 µm; the length/width ratio is 1.35. The micropyle and oocyst residuum are both absent, but the polar granule is present. Ovoidal sporocysts are 22.2 × 11.9 µm. Stieda and sub-Stieda bodies and sporocyst residuum are present. The 2 elongate sporozoites are curved and measure 18.1 × 3.4 µm; both have 2 refractile bodies. Eimeria ochrocephalae n. sp. has bilayered, ellipsoidal, and smooth oocysts that measure 43.8 × 27.7 µm; the length/width ratio is 1.58. The micropyle and oocyst residuum are absent, but the polar granule is present; ovoidal sporocysts are 20.6 × 10.1 µm. Stieda and sub-Stieda bodies and sporocyst residuum are present; 2 elongate and curved sporozoites are 15.8 × 3.4 µm, each of which has 2 refractile bodies.

  1. Frequencies of Blood Group Systems MNS, Diego, and Duffy and Clinical Phases of Carrion's Disease in Amazonas, Peru.

    PubMed

    Acosta, Oscar; Solano, Luis; Escobar, Jorge; Fernandez, Miguel; Solano, Carlos; Fujita, Ricardo

    2014-01-01

    Carrion's disease (CD), is a human bartonellosis, that is, endemic in the Andes of Peru, Ecuador, and Colombia. Bartonella bacilliformis, a native hemotrophic bacteria, is the causative agent of CD, and the interaction with the host could have produced changes in the gene frequencies of erythrocyte antigens. The goal here is to investigate the relationship between allele frequencies of blood group systems MNS, Diego, and Duffy and the clinical phases of CD, within a genetic context. In this associative and analytical study, 76 individuals from Bagua Grande, the province of Utcubamba, and the department of Amazonas in Peru, were enrolled. Forty of them resided in Tomocho-Collicate-Vista Hermosa area (high prevalence of cases in chronic phase, verrucous, or eruptive phase, without previous acute phase). Thirty-six individuals were from the area of Miraflores (high prevalence of cases in acute phase only) and were evaluated for blood group systems MNS, Diego, and Duffy. This study constitutes one of the first attempts at evaluating the genetic factors and clinical phases of CD. No significant statistical differences (P > 0.05) between allele frequencies of blood groups MNS, Diego, and Duffy and the prevalence of chronic and acute phases were detected in the two areas of Amazonas, Peru.

  2. Malaria in the State of Amazonas: a typical Brazilian tropical disease influenced by waves of economic development.

    PubMed

    Sampaio, Vanderson Souza; Siqueira, André Machado; Alecrim, Maria das Graças Costa; Mourão, Maria Paula Gomes; Marchesini, Paola Barbosa; Albuquerque, Bernardino Cláudio; Nascimento, Joabi; Figueira, Élder Augusto Guimarães; Alecrim, Wilson Duarte; Monteiro, Wuelton Marcelo; Lacerda, Marcus Vinícius Guimarães

    2015-01-01

    In Brazil, more than 99% of malaria cases are reported in the Amazon, and the State of Amazonas accounts for 40% of this total. However, the accumulated experience and challenges in controlling malaria in this region in recent decades have not been reported. Throughout the first economic cycle during the rubber boom (1879 to 1912), malaria was recorded in the entire state, with the highest incidence in the villages near the Madeira River in the Southern part of the State of Amazonas. In the 1970s, during the second economic development cycle, the economy turned to the industrial sector and demanded a large labor force, resulting in a large migratory influx to the capital Manaus. Over time, a gradual increase in malaria transmission was observed in peri-urban areas. In the 1990s, the stimulation of agroforestry, particularly fish farming, led to the formation of permanent Anopheline breeding sites and increased malaria in settlements. The estimation of environmental impacts and the planning of measures to mitigate them, as seen in the construction of the Coari-Manaus gas pipeline, proved effective. Considering the changes occurred since the Amsterdam Conference in 1992, disease control has been based on early diagnosis and treatment, but the development of parasites that are resistant to major antimalarial drugs in Brazilian Amazon has posed a new challenge. Despite the decreased lethality and the gradual decrease in the number of malaria cases, disease elimination, which should be associated with government programs for economic development in the region, continues to be a challenge.

  3. Deforestation and climate feedbacks threaten the ecological integrity of south–southeastern Amazonia

    PubMed Central

    Coe, Michael T.; Marthews, Toby R.; Costa, Marcos Heil; Galbraith, David R.; Greenglass, Nora L.; Imbuzeiro, Hewlley M. A.; Levine, Naomi M.; Malhi, Yadvinder; Moorcroft, Paul R.; Muza, Michel Nobre; Powell, Thomas L.; Saleska, Scott R.; Solorzano, Luis A.; Wang, Jingfeng

    2013-01-01

    A mosaic of protected areas, including indigenous lands, sustainable-use production forests and reserves and strictly protected forests is the cornerstone of conservation in the Amazon, with almost 50 per cent of the region now protected. However, recent research indicates that isolation from direct deforestation or degradation may not be sufficient to maintain the ecological integrity of Amazon forests over the next several decades. Large-scale changes in fire and drought regimes occurring as a result of deforestation and greenhouse gas increases may result in forest degradation, regardless of protected status. How severe or widespread these feedbacks will be is uncertain, but the arc of deforestation in south–southeastern Amazonia appears to be particularly vulnerable owing to high current deforestation rates and ecological sensitivity to climate change. Maintaining forest ecosystem integrity may require significant strengthening of forest conservation on private property, which can in part be accomplished by leveraging existing policy mechanisms. PMID:23610166

  4. Deforestation and climate feedbacks threaten the ecological integrity of south-southeastern Amazonia.

    PubMed

    Coe, Michael T; Marthews, Toby R; Costa, Marcos Heil; Galbraith, David R; Greenglass, Nora L; Imbuzeiro, Hewlley M A; Levine, Naomi M; Malhi, Yadvinder; Moorcroft, Paul R; Muza, Michel Nobre; Powell, Thomas L; Saleska, Scott R; Solorzano, Luis A; Wang, Jingfeng

    2013-06-05

    A mosaic of protected areas, including indigenous lands, sustainable-use production forests and reserves and strictly protected forests is the cornerstone of conservation in the Amazon, with almost 50 per cent of the region now protected. However, recent research indicates that isolation from direct deforestation or degradation may not be sufficient to maintain the ecological integrity of Amazon forests over the next several decades. Large-scale changes in fire and drought regimes occurring as a result of deforestation and greenhouse gas increases may result in forest degradation, regardless of protected status. How severe or widespread these feedbacks will be is uncertain, but the arc of deforestation in south-southeastern Amazonia appears to be particularly vulnerable owing to high current deforestation rates and ecological sensitivity to climate change. Maintaining forest ecosystem integrity may require significant strengthening of forest conservation on private property, which can in part be accomplished by leveraging existing policy mechanisms.

  5. Geographic distribution and possible taxonomic distinction of Callicebus torquatus populations (Pitheciidae: Primates) in Peruvian Amazonia.

    PubMed

    Aquino, Rolando; Terrones, Wagner; Cornejo, Fanny; Heymann, Eckhard W

    2008-12-01

    Population densities of yellow-handed titi monkey (Callicebus torquatus) were estimated using transect census methods. Densities were 2.8 individuals/km(2 )in the upper Rio Itaya basin and 2.5 individuals/km(2) in the lower Rio Algodón basin. Group size varied from two to five individuals, with an average of 2.9 individuals per group at the Rio Itaya. Groups were generally composed of two adults, probably the reproductive pair, with progeny from one to three previous birth seasons. Although the Rio Itaya population is phenotypically identical to populations from the rivers Nanay and Tigre, it differs from population on the rivers Napo and Putumayo. This suggests the existence of two disjunct populations of C. torquatus in Peruvian Amazonia whose taxonomic status warrants further examination.

  6. Diet of a free-ranging group of squirrel monkeys (Saimiri sciureus) in eastern Brazilian Amazonia.

    PubMed

    Lima, Eldianne M; Ferrari, Stephen F

    2003-01-01

    The feeding behaviour of free-ranging Saimiri sciureus was monitored over a 6-month period in eastern Brazilian Amazonia. Behavioural data were collected in scan samples (7-9 days per month), and fruit and arthropod availability were recorded monthly. A total of 3,546 feeding records were collected, divided between reproductive plant parts (55.1%) and arthropods (44.9%). The majority of identified prey were orthopterans and lepidopterans, and 10 of the 23 plant species exploited were Leguminosae and Sapotaceae. The diet varied progressively between August (20.0% plant, 80.0% animal) and January (79.7% plant, 20.3% animal). This shift accompanied an increase in the number of fruiting trees and evidence of declining arthropod availability. This included a marked reduction in foraging success and increasing consumption of immature prey. Overall, the data indicate that Amazonian squirrel monkeys may be relatively frugivorous during periods when prey is scarce.

  7. Better RED than dead: paying the people for environmental services in Amazonia.

    PubMed

    Hall, Anthony

    2008-05-27

    The introduction of payments for environmental services (PES) offers an opportunity for traditional and indigenous populations to be compensated for contributing to carbon sequestration in meeting the challenge of ameliorating global warming. As one mechanism among several for promoting biodiversity conservation and sustainable development, pro-poor PES initiatives could eventually be incorporated into an international post-Koyoto framework to encourage reduced emissions from deforestation. Brazil's Proambiente PES scheme for small farmers in Amazonia has enjoyed some limited success, but it has fallen short of expectations. Its performance has been undermined by the lack of a national legal framework, limited funding, reduced implementation capacity, poor cross-sector collaboration and incompatibility with existing regional development policies. These challenges are being addressed by the federal government in cooperation with civil society with a view to scaling up Proambiente into a national programme.

  8. Genetic diversity of red-bellied Titis (Callicebus moloch) from Eastern Amazonia based on microsatellite markers.

    PubMed

    Menescal, Luciana Alcantarino; Gonçalves, Evonnildo Costa; Silva, Artur; Ferrari, Stephen Francis; Schneider, Maria Paula Cruz

    2009-04-01

    The titi monkeys (Callicebus spp.) are a large, diverse genus of platyrrhines, widely distributed in tropical South America. The genetic variability of these monkeys is still relatively poorly known, especially at the population level. In the present study, four heterologous microsatellite markers were used to investigate genetic diversity in 23 individuals from a wild population of red-bellied titis (Callicebus moloch) in eastern Amazonia. An unexpectedly low level of diversity was found. The average number of alleles was 8.75 (range: 5-15), and the average heterozygosity was 0.33 (range: 0.09-0.65). This preliminary information suggests a reduction of the potential for long-term survival of the population and indicates the putative necessity of implementation of a species conservation program.

  9. Glacial Amazonia at the canopy-scale: Using a biophysical model to understand forest robustness

    NASA Astrophysics Data System (ADS)

    Sato, Hiromitsu; Cowling, Sharon Anne

    2017-09-01

    A canopy-scale model (CANOAK) was used to simulate lowland Amazonia during the Last Glacial Maximum. Modeled values of Net Ecosystem Exchange driven by glacial environmental conditions were roughly half the magnitude of modern fluxes. Factorial experiments reveal lowered [CO2] to be the primary cause of reduced carbon fluxes while lowered air temperatures enhance net carbon uptake. LGM temperatures are suggested to be closer to optimal for carbon uptake than modern temperatures, explained through the canopy energy balance. Further analysis of the canopy energy balance and resultant leaf temperature regime provide viable mechanisms to explain enhanced carbon-water relations at lowered temperatures and forest robustness over glaciations. An ecophysiological phenomena known as the 'cross-over' point, wherein leaf temperatures sink below air temperature, was reproduced and found to demarcate critical changes in energy balance partitioning.

  10. [Occurrence of Cephalonomia stephanoderis Betrem (Hymenoptera: Bethylidae) in coffee plantations of the Brazilian Amazonia].

    PubMed

    de Souza, Moisés S; Teixeira, César A D; Azevedo, Celso O; Costa, Valmir A; Costa, José N M

    2006-01-01

    Adults of Cephalonomia stephanoderis Betrem were detected (in November 2003) during the sampling of Coffea canephora Pierre ex A. Froehner berries damaged by Hypothenemus hampei Ferrari (Coleoptera: Scolytidae) in Ouro Preto D'Oeste - Rondônia, Brazil (10 degrees 45'S and 62 degrees 15'W). From January to July 2004, the parasitoid was monthly sampled in 200 berries damaged by H. hampei. Probably, C. stephanoderis can already exert some parasitism pressure at the coffee berry borer population. The occurrence of this parasitoid in natural conditions points out to another alternative for the biological control of the H. hampei in Rondônia. This is the first record of C. stephanoderis in coffee plantations of the Brazilian Amazonia.

  11. Rhodnius barretti, a new species of Triatominae (Hemiptera: Reduviidae) from western Amazonia.

    PubMed

    Abad-Franch, Fernando; Pavan, Márcio G; Jaramillo-O, Nicolás; Palomeque, Francisco S; Dale, Carolina; Chaverra, Duverney; Monteiro, Fernando A

    2013-01-01

    Rhodnius barretti, a new triatomine species, is described based on adult specimens collected in rainforest environments within the Napo ecoregion of western Amazonia (Colombia and Ecuador). R. barretti resembles Rhodnius robustus s.l., but mitochondrial cytochrome b gene sequences reveal that it is a strongly divergent member of the "robustus lineage", i.e., basal to the clade encompassing Rhodnius nasutus, Rhodnius neglectus, Rhodnius prolixus and five members of the R. robustus species complex. Morphometric analyses also reveal consistent divergence from R. robustus s.l., including head and, as previously shown, wing shape and the length ratios of some anatomical structures. R. barretti occurs, often at high densities, in Attalea butyracea and Oenocarpus bataua palms. It is strikingly aggressive and adults may invade houses flying from peridomestic palms. R. barretti must therefore be regarded as a potential Trypanosoma cruzi vector in the Napo ecoregion, where Chagas disease is endemic.

  12. Rhodnius barretti, a new species of Triatominae (Hemiptera: Reduviidae) from western Amazonia

    PubMed Central

    Abad-Franch, Fernando; Pavan, Márcio G; Jaramillo-O, Nicolás; Palomeque, Francisco S; Dale, Carolina; Chaverra, Duverney; Monteiro, Fernando A

    2013-01-01

    Rhodnius barretti , a new triatomine species, is described based on adult specimens collected in rainforest environments within the Napo ecoregion of western Amazonia (Colombia and Ecuador). R. barretti resembles Rhodnius robustus s.l. , but mitochondrial cytochrome b gene sequences reveal that it is a strongly divergent member of the “robustus lineage”, i.e., basal to the clade encompassing Rhodnius nasutus , Rhodnius neglectus , Rhodnius prolixus and five members of the R. robustus species complex. Morphometric analyses also reveal consistent divergence from R. robustus s.l. , including head and, as previously shown, wing shape and the length ratios of some anatomical structures. R. barretti occurs, often at high densities, in Attalea butyracea and Oenocarpus bataua palms. It is strikingly aggressive and adults may invade houses flying from peridomestic palms. R. barretti must therefore be regarded as a potential Trypanosoma cruzi vector in the Napo ecoregion, where Chagas disease is endemic. PMID:24473808

  13. A new species of Bachia Gray, 1845 (Squamata: Gymnophthalmidae) from the western Brazilian Amazonia.

    PubMed

    Teixeira, Mauro; Dal Vechio, Francisco; Nunes, Pedro M Sales; Mollo Neto, Antonio; Lobo, Luciana Moreira; Storti, Luis Fernando; Junqueira, Renato Augusto; Dias, Pedro Henrique Freire; Rodorigues, Miguel Trefaut

    2013-01-01

    A new species of Bachia of the B. dorbignyi group, Bachia scaea sp. nov., is described from the left bank of the upper Madeira River, at Rondônia state, at the western Brazilian Amazonia. The new species resembles morphologically B. dorbignyi and B. peruana, and seems to be related with the former species based on molecular data (16S and c-mos sequences). Nonetheless the presence of a first temporal separating parietal and supralabial scales and the absence of clawed fingers in the new species, can promptly distinguish it from their close relatives. This description ends with several-decades of stasis in the taxonomy of the Bachia dorbignyi group from Amazonian lowlands, and also presents new evidence that supports the Madeira River as a vicariant barrier.

  14. Evaluating the impact of distance measures on deforestation simulations in the fluvial landscapes of amazonia.

    PubMed

    Salonen, Maria; Maeda, Eduardo Eiji; Toivonen, Tuuli

    2014-10-01

    Land use and land cover change (LUCC) models frequently employ different accessibility measures as a proxy for human influence on land change processes. Here, we simulate deforestation in Peruvian Amazonia and evaluate different accessibility measures as LUCC model inputs. We demonstrate how the selection, and different combinations, of accessibility measures impact simulation results. Out of the individual measures, time distance to market center catches the essential aspects of accessibility in our study area. The most accurate simulation is achieved when time distance to market center is used in association with distance to transport network and additional landscape variables. Although traditional Euclidean measures result in clearly lower simulation accuracy when used separately, the combination of two complementary Euclidean measures enhances simulation accuracy significantly. Our results highlight the need for site and context sensitive selection of accessibility variables. More sophisticated accessibility measures can potentially improve LUCC models' spatial accuracy, which often remains low.

  15. The response of vegetation on the Andean flank in western Amazonia to Pleistocene climate change.

    PubMed

    Cárdenas, Macarena L; Gosling, William D; Sherlock, Sarah C; Poole, Imogen; Pennington, R Toby; Mothes, Patricia

    2011-02-25

    A reconstruction of past environmental change from Ecuador reveals the response of lower montane forest on the Andean flank in western Amazonia to glacial-interglacial global climate change. Radiometric dating of volcanic ash indicates that deposition occurred ~324,000 to 193,000 years ago during parts of Marine Isotope Stages 9, 7, and 6. Fossil pollen and wood preserved within organic sediments suggest that the composition of the forest altered radically in response to glacial-interglacial climate change. The presence of Podocarpus macrofossils ~1000 meters below the lower limit of their modern distribution indicates a relative cooling of at least 5°C during glacials and persistence of wet conditions. Interglacial deposits contain thermophilic palms suggesting warm and wet climates. Hence, global temperature change can radically alter vegetation communities and biodiversity in this region.

  16. Rupturing of Biological Spores As a Source of Secondary Particles in Amazonia.

    PubMed

    China, Swarup; Wang, Bingbing; Weis, Johannes; Rizzo, Luciana; Brito, Joel; Cirino, Glauber G; Kovarik, Libor; Artaxo, Paulo; Gilles, Mary K; Laskin, Alexander

    2016-11-15

    Airborne biological particles, such as fungal spores and pollen, are ubiquitous in the Earth's atmosphere and may influence the atmospheric environment and climate, impacting air quality, cloud formation, and the Earth's radiation budget. The atmospheric transformations of airborne biological spores at elevated relative humidity remain poorly understood and their climatic role is uncertain. Using an environmental scanning electron microscope (ESEM), we observed rupturing of Amazonian fungal spores and subsequent release of submicrometer size fragments after exposure to high humidity. We find that fungal fragments contain elements of inorganic salts (e.g., Na and Cl). They are hygroscopic in nature with a growth factor up to 2.3 at 96% relative humidity, thus they may potentially influence cloud formation. Due to their hygroscopic growth, light scattering cross sections of the fragments are enhanced by up to a factor of 10. Furthermore, rupturing of fungal spores at high humidity may explain the bursting events of new particle formation in Amazonia.

  17. Helminth fauna of chiropterans in Amazonia: biological interactions between parasite and host.

    PubMed

    de Albuquerque, Ana Cláudia Alexandre; Moraes, Marcela Figueiredo Duarte; Silva, Ana Carolina; Lapera, Ivan Moura; Tebaldi, José Hairton; Lux Hoppe, Estevam G

    2016-08-01

    Amazonia, the largest Brazilian biome, is one of the most diverse biomes around the world. Considering the Brazilian chiropteran species, 120 out of known 167 species are registered in Pará state, with 10 endemic species. Despite the high diversity of bats in Amazonia, studies on their parasites, especially on helminths, are scarce. Therefore, the present study aims to study the helminth fauna of different bats from the Pará state, Amazon biome, determine the descriptors of infection, and evaluate the host-parasite interactions, as well as evaluate differences in ecological indexes in accordance with the feeding guilds. The study was developed on 67 bats of 21 species captured in several areas of the Pará state. The animals were identified, divided into feeding guilds, and necropsied. The parasites obtained were identified and quantified. A total of 182 parasites were found in 20.89 % of the studied bats, representing nine species, as follows: Anenterotrema eduardocaballeroi, Anenterotrema liliputianum, Ochoterenatrema caballeroi, Tricholeiperia sp., Parahistiostrongylus octacanthus, Litomosoides guiterasi, Litomosoides brasiliensis, Capillariinae gen. sp., and Hymenolepididae gen. sp. Also, the results indicated that there was no impact of parasitism on host body condition and no relationship between sex and parasite intensity. In relation to the feeding guilds, the omnivores showed higher prevalence and mean intensity. Animals from regions closer to the equator tend to have greater richness in parasite species, but the present study revealed low diversity and richness in species. In conclusion, the ecological pattern observed for other animal groups, in which higher parasitic diversity are registered in lower latitudes, is not applicable to chiropterans from the study area.

  18. Assessing the Impact of Recurrent Fires on Forests in Southern Amazonia

    NASA Astrophysics Data System (ADS)

    Morton, D. C.; Defries, R. S.; Hurtt, G. C.; Dubayah, R.

    2008-12-01

    Human-caused fires in Amazon forests alter forest structure, species composition, and the likelihood of future disturbance. Repeated exposure to fire may eventually convert tropical forest into fire-adapted grasslands, a process described as savannization, with dramatic consequences for carbon storage, regional climate, and biodiversity. We tested the savannization hypothesis for a study area in the Brazilian state of Mato Grosso using annual satellite data to determine the frequency of fire damages and characterize vegetation recovery following repeated burning. We then incorporated results from the remote sensing analysis into the Ecosystem Demography (ED) model to quantify the long-term carbon consequences of recurrent forest fire damages in southern Amazonia. Our analysis of time series data from the Moderate Resolution Imaging Spectroradiometer (MODIS) revealed that burned forests are an extensive and long-term component of the frontier landscape, but recurrent fire damages did not lead to evidence of savannization in MODIS-based measures of vegetation greenness following fire. Comparable recovery of dry-season vegetation greenness in the years following first, second, and third fires suggests that tree sprouts and other woody vegetation quickly regained dominance following initial and repeated burning. ED model results demonstrated that establishment of pioneer tree species in fire-damaged forests leads to a short-term increase in the risk of future fires and a long-term decrease in aboveground biomass. Without widespread conversion of forests to grasslands, the long-term impacts from fire in southern Amazonia could still be large if frequent fires trap burned forests in early succession.

  19. Forest Fires in Southwestern Amazonia During 2005: Extent and Distribution in Eastern Acre State, Brazil

    NASA Astrophysics Data System (ADS)

    Brown, I.; Moulard, E. M.; Nakamura, J.; Schroeder, W.; Maldonado, M.; Vasconcelos, S. S.; Selhorst, D.

    2007-05-01

    The extended drought in western Amazonia during 2005 provided the conditions for wild fires that spread in old- growth rain forests and cleared areas of the contiguous areas of Madre de Dios, Peru, Acre, Brazil, and Pando, Bolivia, collectively known as the MAP Region. The greatest extent of the wild fires occurred in eastern Acre State with 60,000 km2 of diverse land uses that range from intensely occupied colonization areas, large cattle ranches, extractive and biological reserves and indigenous areas. At the request of the Public Ministry of Acre and other government agencies we analyzed Landsat 5 and CBERS 2 imagery for forests with canopies affected by fires, using visual interpretation and manual digitalization of polygons. Accuracy assessment was done with 180 aerial photos. The total area of forest with canopies affected by fires was 267,000 ha, roughly five times recent annual deforestation rates for Acre State. Omission and commission errors were 28% and 2%, respectively. Burn scars in non-forest areas were determined using ASTER and CBERS 2 imagery via supervised classification. Total open area with burn scars was 203,000 ha. The total of open area and forests affected by fires exceeded 470,000 ha due to three factors: (1) some images used did not include the last weeks of burning; (2) ground fires in forests that did not affect the canopy and therefore were not detected; and (3) concern of the interpreters to avoid commission errors. Of the twelve municipalities of eastern Acre, most affected were Acrelandia, Placido de Castro, Epitaciolandia with >31%, >19% and >17% of the municipality affected, respectively). The largest impact, >114,000 ha, occurred in the Rio Branco Municipality. Similar patterns of burning occurred in Pando and in Madre de Dios. The environmental, social and economic disaster that these fires produced may be a harbinger of future impacts in southwestern Amazonia if current climate predictions prove to be correct.

  20. The impact of deforestation on the hydrological cycle in Amazonia as observed from remote sensing

    NASA Astrophysics Data System (ADS)

    Vergopolan, N.; Fisher, J.

    2016-12-01

    Given widespread Amazonian deforestation, numerous studies have focused on how the hydrological cycle - specifically precipitation (P) recycling from evapotranspiration (ET) - is impacted by deforestation. Nevertheless, climate macroscale and mesoscale models have given contradictory results on changes in ET and P with deforestation. To date, these results have not been evaluated with observations, so in this work, we assessed a decade of patterns in ET and P over deforested and forested areas using remote sensing (MODIS and TRMM, 2000-2012). We found that ET increased 17% and P 6% in deforested areas, though there was a positive ET and P correlation over southern, and negative in northern/forested Amazonia. Although absolute ET and P values are lower in deforested areas in comparison to border areas, we observed a positive change in ET and P in the last 10 years at the deforested pixels. The increase in ET was larger within the deforested areas; meanwhile, P increased more from inside forest areas to the borders, which agrees with the ET and P correlation patterns. An overall Water Recycling Efficiency increase of 21.1% implies that more water is being evaporated relative to the amount of water precipitated locally. Our results agree with mesoscale and observational studies that link deforestation to increased ET rather than macroscale models, as mesoscale models are able to capture finer-scale land-atmosphere interactions over the fragmented deforestation areas in Amazonia. Our results help to inform the debate between the macroscale and mesoscale models, as deforestation impacts small-scale circulation patterns, turbulence, and moisture fluxes and convergence, and expand our understand of the processes involved.

  1. Interactions between rainfall, deforestation and fires during recent years in the Brazilian Amazonia.

    PubMed

    Aragão, Luiz Eduardo O C; Malhi, Yadvinder; Barbier, Nicolas; Lima, Andre; Shimabukuro, Yosio; Anderson, Liana; Saatchi, Sassan

    2008-05-27

    Understanding the interplay between climate and land-use dynamics is a fundamental concern for assessing the vulnerability of Amazonia to climate change. In this study, we analyse satellite-derived monthly and annual time series of rainfall, fires and deforestation to explicitly quantify the seasonal patterns and relationships between these three variables, with a particular focus on the Amazonian drought of 2005. Our results demonstrate a marked seasonality with one peak per year for all variables analysed, except deforestation. For the annual cycle, we found correlations above 90% with a time lag between variables. Deforestation and fires reach the highest values three and six months, respectively, after the peak of the rainy season. The cumulative number of hot pixels was linearly related to the size of the area deforested annually from 1998 to 2004 (r2=0.84, p=0.004). During the 2005 drought, the number of hot pixels increased 43% in relation to the expected value for a similar deforested area (approx. 19000km2). We demonstrated that anthropogenic forcing, such as land-use change, is decisive in determining the seasonality and annual patterns of fire occurrence. Moreover, droughts can significantly increase the number of fires in the region even with decreased deforestation rates. We may expect that the ongoing deforestation, currently based on slash and burn procedures, and the use of fires for land management in Amazonia will intensify the impact of droughts associated with natural climate variability or human-induced climate change and, therefore, a large area of forest edge will be under increased risk of fires.

  2. Neogene vegetation development in the Amazon Basin: evidence from marine well-2, Foz do Amazonas (Brazil)

    NASA Astrophysics Data System (ADS)

    Bogota-Angel, Raul; Chemale Junior, Farid; Davila, Roberto; Soares, Emilson; Pinto, Ricardo; Do Carmo, Dermeval; Hoorn, Carina

    2014-05-01

    Origen and development of the highly diverse Amazon tropical forest has mostly been inferred from continental sites. However, sediment records in the marine Foz do Amazonas Basin can provide important information to better understand the influence of the Andes uplift and climate change on its plant biomes evolution since the Neogene. Sediment analyses of samples from BP-Petrobras well 1 and 2, drilled in the Amazon Fan, allowed to infer the onset of the transcontinental Amazon river and the fan phase during the middle to late Miocene (c. 10.5 Ma). As part of the CLIMAMAZON research programme we performed pollen analysis on the 10.5 to 0.4 Ma time interval. 76 ditch cutting samples of the upper 4165 m sediments of well 2 permitted us to infer changes in floral composition in the Amazon Basin. The palynological spectra across this interval (nannofossil based age model) include pollen, fern spores, dinocysts and foram lignings. When possible pollen and fern spores were grouped in four vegetation types: estuarine, tropical, mountain forest and high mountain open treeless vegetation. Pollen is generally corroded and reflects the effects of sediment transportation while reworked material is also common. Good pollen producers such as Poaceae, Asteraceae and Cyperaceae are common and reflect indistinctive vegetation types particularly those associated to riverine systems. Rhizophora/Zonocostites spp. indicate "close-distance" mangrove development. Tropical forest biomes are represented by pollen that resemble Moraceae-Urticaceae, Melastomataceae-Combretaceae, Sapotaceae, Alchornea, Euphorbiaceae, Rubiaceae, Bignoniaceae, Mauritia and Arecaceae. Myrica, and particularly sporadic occurrences of fossil fern spores like Lophosoria, and Cyathea suggest the development of a moist Andean forest in areas above 1000 m. First indicators of high altitudes appear in the last part of late Miocene with taxa associated to current Valeriana and particularly Polylepis, a neotropical taxon

  3. Pharmacokinetics of butorphanol after intravenous, intramuscular, and oral administration in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Guzman, David Sanchez-Migallon; Flammer, Keven; Paul-Murphy, Joanne R; Barker, Steven A; Tully, Thomas N

    2011-09-01

    Previous studies have validated the clinical use of opioids with kaap-receptor affinities for pain management in birds. Butorphanol, a kappa opioid receptor agonist and a mu opioid receptor antagonist, is currently considered by many clinicians to be the opioid of choice for this use. However, despite studies reporting the analgesic properties of butorphanol in psittacine birds, dosing intervals have not been established for any psittacine species. The goals of this study in the Hispaniolan Amazon parrot (Amazona ventralis) were to evaluate the pharmacokinetics of butorphanol tartrate after intravenous (IV), intramuscular (IM), and oral (PO) administration and to determine the bioavailability of butorphanol tartrate after oral administration. Twelve Hispaniolan Amazon parrots were used in the study, with a complete-crossover experimental design and a 3-month period separating each part of the study. The birds were randomly assigned to 3 groups (n = 4) for each stage. Butorphanol tartrate was administered once at a dose of 5 mg/kg in the basilic vein or pectoral muscles or as an oral solution delivered via feeding tube into the crop for the IV, IM, and PO studies, respectively. After butorphanol administration, blood samples were collected at 1, 5, 15, 30, 60, 90, 120, 180, and 240 minutes for the IV and IM studies and at 5, 15, 30, 60, 90, 120, 180, 240, and 300 minutes for the PO study. Because of the size limitation of the birds, naive pooling of datum points was used to generate a mean plasma butorphanol concentration at each time point. For each study, birds in each group (n = 4) were bled 3 times after dosing. Plasma butorphanol concentrations were determined by high-performance liquid chromatography/tandem mass spectrometry, and pharmacokinetic parameters were calculated. Butorphanol tartrate was found to have high bioavailability and rapid elimination following IM administration. In contrast, oral administration resulted in low bioavailability (< 10%), thus

  4. Palpation- and ultrasound-guided brachial plexus blockade in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    da Cunha, Anderson F; Strain, George M; Rademacher, Nathalie; Schnellbacher, Rodney; Tully, Thomas N

    2013-01-01

    To compare palpation-guided with ultrasound-guided brachial plexus blockade in Hispaniolan Amazon parrots. Prospective randomized experimental trial. Eighteen adult Hispaniolan Amazon parrots (Amazona ventralis) weighing 252-295 g. After induction of anesthesia with isoflurane, parrots received an injection of lidocaine (2 mg kg(-1)) in a total volume of 0.3 mL at the axillary region. The birds were randomly assigned to equal groups using either palpation or ultrasound as a guide for the brachial plexus block. Nerve evoked muscle potentials (NEMP) were used to monitor effectiveness of brachial plexus block. The palpation-guided group received the local anesthetic at the space between the pectoral muscle, triceps, and supracoracoideus aticimus muscle, at the insertion of the tendons of the caudal coracobrachial muscle, and the caudal scapulohumeral muscle. For the ultrasound-guided group, the brachial plexus and the adjacent vessels were located with B-mode ultrasonography using a 7-15 MHz linear probe. After location, an 8-5 MHz convex transducer was used to guide injections. General anesthesia was discontinued 20 minutes after lidocaine injection and the birds recovered in a padded cage. Both techniques decreased the amplitude of NEMP. Statistically significant differences in NEMP amplitudes, were observed within the ultrasound-guided group at 5, 10, 15, and 20 minutes after injection and within the palpation-guided group at 10, 15, and 20 minutes after injection. There was no statistically significant difference between the two groups. No effect on motor function, muscle relaxation or wing droop was observed after brachial plexus block. The onset of the brachial plexus block tended to be faster when ultrasonography was used. Brachial plexus injection can be performed in Hispaniolan Amazon parrots and nerve evoked muscle potentials were useful to monitor the effects on nerve conduction in this avian species. Neither technique produced an effective block at the

  5. Biogeographic and diversification patterns of Neotropical Troidini butterflies (Papilionidae) support a museum model of diversity dynamics for Amazonia.

    PubMed

    Condamine, Fabien L; Silva-Brandão, Karina L; Kergoat, Gael J; Sperling, Felix A H

    2012-06-12

    The temporal and geographical diversification of Neotropical insects remains poorly understood because of the complex changes in geological and climatic conditions that occurred during the Cenozoic. To better understand extant patterns in Neotropical biodiversity, we investigated the evolutionary history of three Neotropical swallowtail Troidini genera (Papilionidae). First, DNA-based species delimitation analyses were conducted to assess species boundaries within Neotropical Troidini using an enlarged fragment of the standard barcode gene. Molecularly delineated species were then used to infer a time-calibrated species-level phylogeny based on a three-gene dataset and Bayesian dating analyses. The corresponding chronogram was used to explore their temporal and geographical diversification through distinct likelihood-based methods. The phylogeny for Neotropical Troidini was well resolved and strongly supported. Molecular dating and biogeographic analyses indicate that the extant lineages of Neotropical Troidini have a late Eocene (33-42 Ma) origin in North America. Two independent lineages (Battus and Euryades+Parides) reached South America via the GAARlandia temporary connection, and later became extinct in North America. They only began substantive diversification during the early Miocene in Amazonia. Macroevolutionary analysis supports the "museum model" of diversification, rather than Pleistocene refugia, as the best explanation for the diversification of these lineages. This study demonstrates that: (i) current Neotropical biodiversity may have originated ex situ; (ii) the GAARlandia bridge was important in facilitating invasions of South America; (iii) colonization of Amazonia initiated the crown diversification of these swallowtails; and (iv) Amazonia is not only a species-rich region but also acted as a sanctuary for the dynamics of this diversity. In particular, Amazonia probably allowed the persistence of old lineages and contributed to the steady

  6. Biogeographic and diversification patterns of Neotropical Troidini butterflies (Papilionidae) support a museum model of diversity dynamics for Amazonia

    PubMed Central

    2012-01-01

    Background The temporal and geographical diversification of Neotropical insects remains poorly understood because of the complex changes in geological and climatic conditions that occurred during the Cenozoic. To better understand extant patterns in Neotropical biodiversity, we investigated the evolutionary history of three Neotropical swallowtail Troidini genera (Papilionidae). First, DNA-based species delimitation analyses were conducted to assess species boundaries within Neotropical Troidini using an enlarged fragment of the standard barcode gene. Molecularly delineated species were then used to infer a time-calibrated species-level phylogeny based on a three-gene dataset and Bayesian dating analyses. The corresponding chronogram was used to explore their temporal and geographical diversification through distinct likelihood-based methods. Results The phylogeny for Neotropical Troidini was well resolved and strongly supported. Molecular dating and biogeographic analyses indicate that the extant lineages of Neotropical Troidini have a late Eocene (33–42 Ma) origin in North America. Two independent lineages (Battus and Euryades + Parides) reached South America via the GAARlandia temporary connection, and later became extinct in North America. They only began substantive diversification during the early Miocene in Amazonia. Macroevolutionary analysis supports the “museum model” of diversification, rather than Pleistocene refugia, as the best explanation for the diversification of these lineages. Conclusions This study demonstrates that: (i) current Neotropical biodiversity may have originated ex situ; (ii) the GAARlandia bridge was important in facilitating invasions of South America; (iii) colonization of Amazonia initiated the crown diversification of these swallowtails; and (iv) Amazonia is not only a species-rich region but also acted as a sanctuary for the dynamics of this diversity. In particular, Amazonia probably allowed the persistence of old

  7. Maximizing Amazonia's Ecosystem Services: Juggling the potential for carbon storage, agricultural yield and biodiversity in the Amazon

    NASA Astrophysics Data System (ADS)

    O'Connell, C. S.; Foley, J. A.; Gerber, J. S.; Polasky, S.

    2011-12-01

    The Amazon is not only an exceptionally biodiverse and carbon-rich tract of tropical forest, it is also a case study in land use change. Over the next forty years it will continue to experience pressure from an urbanizing and increasingly affluent populace: under a business-as-usual scenario, global cropland, pasture and biofuels systems will carry on expanding, while the Amazon's carbon storage potential will likely become another viable revenue source under REDD+. Balancing those competing land use pressures ought also take into account Amazonia's high - but heterogeneous - biodiversity. Knowing where Amazonia has opportunities to make efficient or optimal trade offs between carbon storage, agricultural production and biodiversity can allow policymakers to direct or influence LUC drivers. This analysis uses a spatially-explicit model that takes climate and management into account to quantify the potential agricultural yield of both the Amazon's most important agricultural commodities - sugar, soy and maize - as well as several that are going to come into increasing prominence, including palm oil. In addition, it maps the potential for carbon to be stored in forest biomass and relative species richness across Amazonia. We then compare carbon storage, agricultural yield and species richness and identify areas where efficient trade offs occur between food, carbon, and biodiversity - three critical ecosystem goods and services provided by the world's largest tropical forest.

  8. Ostracods (Crustacea) and their palaeoenvironmental implication for the Solimões Formation (Late Miocene; Western Amazonia/Brazil).

    PubMed

    Gross, Martin; Ramos, Maria Ines; Caporaletti, Marco; Piller, Werner E

    2013-03-01

    Western Amazonia's landscape and biota were shaped by an enormous wetland during the Miocene epoch. Among the most discussed topics of this ecosystem range the question on the transitory influx of marine waters. Inter alia the occurrence of typically brackish water associated ostracods is repeatedly consulted to infer elevated salinities or even marine ingressions. The taxonomical investigation of ostracod faunas derived from the upper part of the Solimões Formation (Eirunepé; W-Brazil) documents a moderately diverse assemblage (19 species). A wealth of freshwater ostracods (mainly Cytheridella, Penthesilenula) was found co-occurring with taxa (chiefly Cyprideis) usually related to marginal marine settings today. The observed faunal compositions as well as constantly very light δ(18)O- and δ(13)C-values obtained by measuring both, the freshwater and brackish water ostracod group, refer to entirely freshwater conditions. These results corroborate with previous sedimentological and palaeontological observations, which proposed a fluvial depositional system for this part of western Amazonia during the Late Miocene. We demonstrate that some endemic, "brackish" water ostracods (i.e., Cyprideis) have been effectively adapted to freshwater conditions. Thus, their occurrence is no univocal evidence for the influence of brackish or marine waters in western Amazonia during the Miocene.

  9. Ostracods (Crustacea) and their palaeoenvironmental implication for the Solimões Formation (Late Miocene; Western Amazonia/Brazil)

    PubMed Central

    Gross, Martin; Ramos, Maria Ines; Caporaletti, Marco; Piller, Werner E.

    2013-01-01

    Western Amazonia's landscape and biota were shaped by an enormous wetland during the Miocene epoch. Among the most discussed topics of this ecosystem range the question on the transitory influx of marine waters. Inter alia the occurrence of typically brackish water associated ostracods is repeatedly consulted to infer elevated salinities or even marine ingressions. The taxonomical investigation of ostracod faunas derived from the upper part of the Solimões Formation (Eirunepé; W-Brazil) documents a moderately diverse assemblage (19 species). A wealth of freshwater ostracods (mainly Cytheridella, Penthesilenula) was found co-occurring with taxa (chiefly Cyprideis) usually related to marginal marine settings today. The observed faunal compositions as well as constantly very light δ18O- and δ13C-values obtained by measuring both, the freshwater and brackish water ostracod group, refer to entirely freshwater conditions. These results corroborate with previous sedimentological and palaeontological observations, which proposed a fluvial depositional system for this part of western Amazonia during the Late Miocene. We demonstrate that some endemic, “brackish” water ostracods (i.e., Cyprideis) have been effectively adapted to freshwater conditions. Thus, their occurrence is no univocal evidence for the influence of brackish or marine waters in western Amazonia during the Miocene. PMID:26523090

  10. Geologic map of the Venezuela part of the Puerto Ayacucho 2 degrees x 3 degrees Quadrangle, Amazonas Federal Territory, Venezuela

    USGS Publications Warehouse

    Wynn, Jeffrey C.; Olmore, Steven D.; Mendoza, Vicente; García, Andrés; Rendon, Ines; Estanga, Yasmin; Rincon, Haydee; Martinez, Felix; Lugo, Elis; Rivero, Nelson; Schruben, Paul G.

    1994-01-01

    This map is one of a series of 1:500,000-scale maps that, along with several other products, stems from a cooperative agreement between the U.S. Geological Survey (USGS) and the Corporacion Venezolana de Guayana, Tecnica Minera, C.A. (TECMIN), a Venezuelan Government-owned mining and mineral exploration company. The agreement covered cooperative work carried out in the Precambrian Shield of southern Venezuela during 1987-1991 and included a geologic and mineral resource inventory, technology transfer, and scientific training (Wynn and others, in press). The Precambrian Guayana Shield (Escudo de Guyana, not to be confused with the neighboring country of Guyana) includes some of the oldest known rocks in the world (Mendoza, 1977) and also covers parts of neighboring Guyana, Surinam, French Guiana, Columbia, and Brazil. In Venezuela, it underlies most of Bolivar state and all of the Amazonas Federal Territory (see index map).

  11. Characterization of atherosclerosis by histochemical and immunohistochemical methods in African grey parrots (Psittacus erithacus) and Amazon parrots (Amazona spp.).

    PubMed

    Fricke, Cornelia; Schmidt, Volker; Cramer, Kerstin; Krautwald-Junghanns, Maria-Elisabeth; Dorrestein, Gerry M

    2009-09-01

    The aim of the study was to characterize atherosclerotic changes in African grey parrots (Psittacus erithacus) and Amazon parrots (Amazona spp.) by histochemical and immunohistochemical methods. Samples of the aorta ascendens and trunci brachiocephalici from 62 African grey parrots and 35 Amazon parrots were stained by hematoxylin and eosin and Elastica van Gieson for grading of atherosclerosis in these birds. Four different stages were differentiated. The incidence of atherosclerosis in the examined parrots was 91.9% in African grey parrots and 91.4% in Amazon parrots. To evaluate the pathogenesis in birds, immunohistochemical methods were performed to demonstrate lymphocytes, macrophages, smooth muscle cells, and chondroitin sulfate. According to the missing lymphocytes and macrophages and the absence of invasion and proliferation of smooth muscle cells in each atherosclerotic stage, "response-to-injury hypothesis" seems inapplicable in parrots. Additionally, we found alterations of vitally important organs (heart, lungs) significantly correlated with atherosclerosis of the aorta ascendens.

  12. Diversity and distribution of sandflies (Diptera: Psychodidae: Phlebotominae) in a military area in the state of Amazonas, Brazil

    PubMed Central

    Gomes, Luís Henrique Monteiro; Albuquerque, Maria Ivonei Carvalho; da Rocha, Liliane Coelho; Pinheiro, Francimeire Gomes; Franco, Antonia Maria Ramos

    2013-01-01

    This study reports the distribution, ecotopes and fauna diversity of sandflies captured in five training bases on a military reserve in Manaus, state of Amazonas (AM). A total of 10,762 specimens were collected, which were distributed among 58 species, with the highest number recorded at Base Instruction 1 (BI1). A higher rate of species richness was found at the Base Instruction Boina Rajada and low levels of diversity associated with a high abundance index with the clear dominance of Lutzomyia umbratilis, Lutzomyia ruii and Lutzomyia anduzei were found at BI1. The abundance of Lu. umbratilis raises the possibility of outbreaks of American cutaneous leishmaniasis by the main vector of the disease in AM. PMID:23903983

  13. EFFECTS OF EXERCISE ON THE PLASMA LIPID PROFILE IN HISPANIOLAN AMAZON PARROTS (AMAZONA VENTRALIS) WITH NATURALLY OCCURRING HYPERCHOLESTEROLEMIA.

    PubMed

    Gustavsen, Kate A; Stanhope, Kimber L; Lin, Amy S; Graham, James L; Havel, Peter J; Paul-Murphy, Joanne R

    2016-09-01

    Hypercholesterolemia is common in psittacines, and Amazon parrots ( Amazona spp.) are particularly susceptible. Associations have been demonstrated between naturally occurring and experimentally induced hypercholesterolemia and atherosclerosis in psittacines. Daily exercise improves lipid metabolism in humans and other mammals, as well as pigeons and chickens, under varying experimental conditions. Hispaniolan Amazon parrots ( Amazona ventralis ) with naturally occurring hypercholesterolemia (343-576 mg/dl) were divided into two groups. An exercised group (n = 8) was housed as a flock and exercised daily with 30 min of aviary flight and 30 min walking on a rotating perch. A sedentary control group (n = 4) was housed in individual cages with no exercise regime. A plasma lipid panel, including total cholesterol, high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol, and triglycerides, was validated for this species. Body weight, chest girth, and the lipid panel were measured at 0, 61, and 105 days. Hematology and plasma biochemistry were measured at 0 and 105 days. Weight and girth were significantly lower in exercised than sedentary parrots at 61 and 105 days. HDL-C concentrations were significantly higher in exercised parrots at 61 days but returned to near baseline by 105 days. There were no significant changes in hematology, biochemistry, or other lipid panel parameters. Results were similar to studies in humans and animal models, in which increased HDL-C was the most consistent effect of exercise on circulating lipid and lipoprotein parameters. The return toward baseline HDL-C may have resulted from decreased participation in aviary flight. Additional investigation will be required to determine the amount of exercise and change in circulating lipid-related parameters necessary to improve long-term wellness in psittacine species predisposed to hypercholesterolemia.

  14. Effects of Hurricane Georges on habitat use by captive-reared Hispaniolan Parrots (Amazona ventralis) released in the Dominican Republic

    USGS Publications Warehouse

    White, T.H.; Collazo, J.A.; Vilella, F.J.; Guerrero, S.A.

    2005-01-01

    We radio-tagged and released 49 captive-reared Hispaniolan Parrots (Amazona ventralis) in Parque Nacional del Este (PNE), Dominican Republic, during 1997 and 1998. Our primary objective was to develop a restoration program centered on using aviary-reared birds to further the recovery of the critically endangered Puerto Rican Parrot (A. vittata). Hurricane Georges made landfall over the release area on 22 September 1998 with sustained winds of 224 km/h, providing us with a unique opportunity to quantify responses of parrots to such disturbances. Quantitative data on such responses by any avian species are scarce, particularly for Amazona species, many of which are in peril and occur in hurricane-prone areas throughout the Caribbean. Mean home ranges of 18 parrots monitored both before and after the hurricane increased (P = 0.08) from 864 ha (CI = 689-1039 ha) pre-hurricane to 1690 ha (CI = 1003-2377 ha) post-hurricane. The total area traversed by all parrots increased > 300%, from 4884 ha pre-hurricane to 15,490 ha post-hurricane. Before Hurricane Georges, parrot activity was concentrated in coastal scrub, tall broadleaf forest, and abandoned agriculture (conucos). After the hurricane, parrots concentrated their activities in areas of tall broadleaf forest and abandoned conucos. Topographic relief, primarily in the form of large sinkholes, resulted in "resource refugia" where parrots and other frugivores foraged after the hurricane. Habitat use and movement patterns exhibited by released birds highlight the importance of carefully considering effects of season, topography, and overall size of release areas when planning psittacine restorations in hurricane-prone areas. ?? The Neotropical Ornithological Society.

  15. A locally funded Puerto Rican parrot (Amazona vittata) genome sequencing project increases avian data and advances young researcher education.

    PubMed

    Oleksyk, Taras K; Pombert, Jean-Francois; Siu, Daniel; Mazo-Vargas, Anyimilehidi; Ramos, Brian; Guiblet, Wilfried; Afanador, Yashira; Ruiz-Rodriguez, Christina T; Nickerson, Michael L; Logue, David M; Dean, Michael; Figueroa, Luis; Valentin, Ricardo; Martinez-Cruzado, Juan-Carlos

    2012-09-28

    Amazona vittata is a critically endangered Puerto Rican endemic bird, the only surviving native parrot species in the United States territory, and the first parrot in the large Neotropical genus Amazona, to be studied on a genomic scale. In a unique community-based funded project, DNA from an A. vittata female was sequenced using a HiSeq Illumina platform, resulting in a total of ~42.5 billion nucleotide bases. This provided approximately 26.89x average coverage depth at the completion of this funding phase. Filtering followed by assembly resulted in 259,423 contigs (N50 = 6,983 bp, longest = 75,003 bp), which was further scaffolded into 148,255 fragments (N50 = 19,470, longest = 206,462 bp). This provided ~76% coverage of the genome based on an estimated size of 1.58 Gb. The assembled scaffolds allowed basic genomic annotation and comparative analyses with other available avian whole-genome sequences. The current data represents the first genomic information from and work carried out with a unique source of funding. This analysis further provides a means for directed training of young researchers in genetic and bioinformatics analyses and will facilitate progress towards a full assembly and annotation of the Puerto Rican parrot genome. It also adds extensive genomic data to a new branch of the avian tree, making it useful for comparative analyses with other avian species. Ultimately, the knowledge acquired from these data will contribute to an improved understanding of the overall population health of this species and aid in ongoing and future conservation efforts.

  16. A locally funded Puerto Rican parrot (Amazona vittata) genome sequencing project increases avian data and advances young researcher education

    PubMed Central

    2012-01-01

    Background Amazona vittata is a critically endangered Puerto Rican endemic bird, the only surviving native parrot species in the United States territory, and the first parrot in the large Neotropical genus Amazona, to be studied on a genomic scale. Findings In a unique community-based funded project, DNA from an A. vittata female was sequenced using a HiSeq Illumina platform, resulting in a total of ~42.5 billion nucleotide bases. This provided approximately 26.89x average coverage depth at the completion of this funding phase. Filtering followed by assembly resulted in 259,423 contigs (N50 = 6,983 bp, longest = 75,003 bp), which was further scaffolded into 148,255 fragments (N50 = 19,470, longest = 206,462 bp). This provided ~76% coverage of the genome based on an estimated size of 1.58 Gb. The assembled scaffolds allowed basic genomic annotation and comparative analyses with other available avian whole-genome sequences. Conclusions The current data represents the first genomic information from and work carried out with a unique source of funding. This analysis further provides a means for directed training of young researchers in genetic and bioinformatics analyses and will facilitate progress towards a full assembly and annotation of the Puerto Rican parrot genome. It also adds extensive genomic data to a new branch of the avian tree, making it useful for comparative analyses with other avian species. Ultimately, the knowledge acquired from these data will contribute to an improved understanding of the overall population health of this species and aid in ongoing and future conservation efforts. PMID:23587420

  17. Impact of mixing state and hygroscopicity on CCN activity of biomass burning aerosol in Amazonia

    NASA Astrophysics Data System (ADS)

    Sánchez Gácita, Madeleine; Longo, Karla M.; Freire, Julliana L. M.; Freitas, Saulo R.; Martin, Scot T.

    2017-02-01

    Smoke aerosols prevail throughout Amazonia because of widespread biomass burning during the dry season, and external mixing, low variability in the particle size distribution and low particle hygroscopicity are typical. There can be profound effects on cloud properties. This study uses an adiabatic cloud model to simulate the activation of smoke particles as cloud condensation nuclei (CCN) for three hypothetical case studies, chosen as to resemble biomass burning aerosol observations in Amazonia. The relative importance of variability in hygroscopicity, mixing state, and activation kinetics for the activated fraction and maximum supersaturation is assessed. For a population with κp = 0.04, an overestimation of the cloud droplet number concentration Nd for the three selected case studies between 22.4 ± 1.4 and 54.3 ± 3.7 % was obtained when assuming a hygroscopicity parameter κp = 0.20. Assuming internal mixing of the aerosol population led to overestimations of up to 20 % of Nd when a group of particles with medium hygroscopicity was present in the externally mixed population cases. However, the overestimations were below 10 % for external mixtures between very low and low-hygroscopicity particles, as seems to be the case for Amazon smoke particles. Kinetic limitations were significant for medium- and high-hygroscopicity particles, and much lower for very low and low-hygroscopicity particles. When particles were assumed to be at equilibrium and to respond instantly to changes in the air parcel supersaturation, the overestimation of the droplet concentration was up to ˜ 100 % in internally mixed populations, and up to ˜ 250 % in externally mixed ones, being larger for the higher values of hygroscopicity. In addition, a perceptible delay between the times when maximum supersaturation and maximum aerosol activated fraction are reached was noticed and, for aerosol populations with effective hygroscopicity κpeff higher than a certain threshold value, the delay in

  18. Evaluation of simple diffusion chlorinators for decontamination of wells in a rural settlement in Amazonia, Brazil.

    PubMed

    Ferreira, Danielle Costa; Luz, Sergio Luiz Bessa; Buss, Daniel Forsin

    2016-03-01

    While the Amazon region has the world's largest reserve of fresh water, the lack of water services and water treatment, especially in non-urban regions, causes environmental and health problems. In isolated rural settlements supply is usually by shallow wells, and the quality of water is a concern for residents. These are situations where there are restricted options for water treatment. This study aimed to assess the use of simplified diffusion chlorinators as an alternative water treatment method. Bacteriological analyses were made of 100 samples of water from the wells, before and after application of the chlorinators, in the Rural Settlement of Rio Pardo, Presidente Figueiredo in the Brazilian State of Amazonas. The sources that were analyzed were considered inappropriate for consumption without prior treatment, and the use of the chlorinators eliminated all contamination by thermotolerant coliforms in the great majority of cases. Also, the method was well received by residents, because it does not leave a taste in the water, is relatively low-cost and handling is easy. We discuss the advantages and limitations of the use of this method of treatment for this social-environmental context and present suggestions for improvement and adaptation, for application of this methodology in other settlements.

  19. Deforestation and Carbon Loss in Southwest Amazonia: Impact of Brazil's Revised Forest Code

    NASA Astrophysics Data System (ADS)

    Roriz, Pedro Augusto Costa; Yanai, Aurora Miho; Fearnside, Philip Martin

    2017-09-01

    In 2012 Brazil's National Congress altered the country's Forest Code, decreasing various environmental protections in the set of regulations governing forests. This suggests consequences in increased deforestation and emissions of greenhouse gases and in decreased protection of fragile ecosystems. To ascertain the effects, a simulation was run to the year 2025 for the municipality (county) of Boca do Acre, Amazonas state, Brazil. A baseline scenario considered historical behavior (which did not respect the Forest Code), while two scenarios considered full compliance with the old Forest Code (Law 4771/1965) and the current Code (Law 12,651/2012) regarding the protection of "areas of permanent preservation" (APPs) along the edges of watercourses. The models were parameterized from satellite imagery and simulated using Dinamica-EGO software. Deforestation actors and processes in the municipality were observed in loco in 2012. Carbon emissions and loss of forest by 2025 were computed in the three simulation scenarios. There was a 10% difference in the loss of carbon stock and of forest between the scenarios with the two versions of the Forest Code. The baseline scenario showed the highest loss of carbon stocks and the highest increase in annual emissions. The greatest damage was caused by not protecting wetlands and riparian zones.

  20. Geographic Distribution of Isolated Indigenous Societies in Amazonia and the Efficacy of Indigenous Territories

    PubMed Central

    2015-01-01

    The headwaters of the Amazon Basin harbor most of the world’s last indigenous peoples who have limited contact with encroaching colonists. Knowledge of the geographic distribution of these isolated groups is essential to assist with the development of immediate protections for vulnerable indigenous settlements. We used remote sensing to document the locations of 28 isolated villages within the four Brazilian states of Acre, Amazonas, Roraima, and Rondônia. The sites were confirmed during previous over-flights and by image evidence of thatched-roof houses; they are estimated to host over 1,700 individuals. Locational data were used to train maximum entropy models that identified landscape and anthropogenic features associated with the occurrence of isolated indigenous villages, including elevation, proximity to streams of five different orders, proximity to roads and settlements, proximity to recent deforestation, and vegetation cover type. Isolated villages were identified at mid elevations, within 20 km of the tops of watersheds and at greater distances from existing roads and trails. We further used model results, combined with boundaries of the existing indigenous territory system that is designed to protect indigenous lands, to assess the efficacy of the existing protected area network for isolated peoples. Results indicate that existing indigenous territories encompass all of the villages we identified, and 50% of the areas with high predicted probabilities of isolated village occurrence. Our results are intended to help inform policies that can mitigate against future external threats to isolated peoples. PMID:25970612

  1. Geographic distribution of isolated indigenous societies in Amazonia and the efficacy of indigenous territories.

    PubMed

    Kesler, Dylan C; Walker, Robert S

    2015-01-01

    The headwaters of the Amazon Basin harbor most of the world's last indigenous peoples who have limited contact with encroaching colonists. Knowledge of the geographic distribution of these isolated groups is essential to assist with the development of immediate protections for vulnerable indigenous settlements. We used remote sensing to document the locations of 28 isolated villages within the four Brazilian states of Acre, Amazonas, Roraima, and Rondônia. The sites were confirmed during previous over-flights and by image evidence of thatched-roof houses; they are estimated to host over 1,700 individuals. Locational data were used to train maximum entropy models that identified landscape and anthropogenic features associated with the occurrence of isolated indigenous villages, including elevation, proximity to streams of five different orders, proximity to roads and settlements, proximity to recent deforestation, and vegetation cover type. Isolated villages were identified at mid elevations, within 20 km of the tops of watersheds and at greater distances from existing roads and trails. We further used model results, combined with boundaries of the existing indigenous territory system that is designed to protect indigenous lands, to assess the efficacy of the existing protected area network for isolated peoples. Results indicate that existing indigenous territories encompass all of the villages we identified, and 50% of the areas with high predicted probabilities of isolated village occurrence. Our results are intended to help inform policies that can mitigate against future external threats to isolated peoples.

  2. Deforestation and Carbon Loss in Southwest Amazonia: Impact of Brazil's Revised Forest Code.

    PubMed

    Roriz, Pedro Augusto Costa; Yanai, Aurora Miho; Fearnside, Philip Martin

    2017-09-01

    In 2012 Brazil's National Congress altered the country's Forest Code, decreasing various environmental protections in the set of regulations governing forests. This suggests consequences in increased deforestation and emissions of greenhouse gases and in decreased protection of fragile ecosystems. To ascertain the effects, a simulation was run to the year 2025 for the municipality (county) of Boca do Acre, Amazonas state, Brazil. A baseline scenario considered historical behavior (which did not respect the Forest Code), while two scenarios considered full compliance with the old Forest Code (Law 4771/1965) and the current Code (Law 12,651/2012) regarding the protection of "areas of permanent preservation" (APPs) along the edges of watercourses. The models were parameterized from satellite imagery and simulated using Dinamica-EGO software. Deforestation actors and processes in the municipality were observed in loco in 2012. Carbon emissions and loss of forest by 2025 were computed in the three simulation scenarios. There was a 10% difference in the loss of carbon stock and of forest between the scenarios with the two versions of the Forest Code. The baseline scenario showed the highest loss of carbon stocks and the highest increase in annual emissions. The greatest damage was caused by not protecting wetlands and riparian zones.

  3. A phylogenetic lineage of closely related trypanosomes (Trypanosomatidae, Kinetoplastida) of anurans and sand flies (Psychodidae, Diptera) sharing the same ecotopes in brazilian amazonia.

    PubMed

    Ferreira, Robson C; De Souza, Adelson A; Freitas, Rui A; Campaner, Marta; Takata, Carmem S A; Barrett, Toby V; Shaw, Jeffrey J; Teixeira, Marta M G

    2008-01-01

    Analysis of the phylogenetic relationships among trypanosomes from vertebrates and invertebrates disclosed a new lineage of trypanosomes circulating among anurans and sand flies that share the same ecotopes in Brazilian Amazonia. This assemblage of closely related trypanosomes was determined by comparing whole SSU rDNA sequences of anuran trypanosomes from the Brazilian biomes of Amazonia, the Pantanal, and the Atlantic Forest and from Europe, North America, and Africa, and from trypanosomes of sand flies from Amazonia. Phylogenetic trees based on maximum likelihood and parsimony corroborated the positioning of all new anuran trypanosomes in the aquatic clade but did not support the monophyly of anuran trypanosomes. However, all analyses always supported four major clades (An01-04) of anuran trypanosomes. Clade An04 is composed of trypanosomes from exotic anurans. Isolates in clades An01 and An02 were from Brazilian frogs and toads captured in the three biomes studied, Amazonia, the Pantanal and the Atlantic Forest. Clade An01 contains mostly isolates from Hylidae whereas clade An02 comprises mostly isolates from Bufonidae; and clade An03 contains trypanosomes from sand flies and anurans of Bufonidae, Leptodactylidae, and Leiuperidae exclusively from Amazonia. To our knowledge, this is the first study describing morphological and growth features, and molecular phylogenetic affiliation of trypanosomes from anurans and phlebotomines, incriminating these flies as invertebrate hosts and probably also as important vectors of Amazonian terrestrial anuran trypanosomes.

  4. Simulation of deforestation in eastern Amazonia using a high-resolution model

    NASA Astrophysics Data System (ADS)

    Gandu, A. W.; Cohen, J. C. P.; de Souza, J. R. S.

    This work evaluates the impact of deforestation on the climate of the eastern portion of the Amazon basin. This region is primarily an area of native tropical rainforest, but also contains several other natural ecosystems such as mangroves and savanna. It is the most densely populated area in Amazonia, and has been significantly affected by deforestation. In this study, numerical simulations were performed with a high spatial resolution, regional model that allows for consideration of mesoscale aspects such as topography, coastlines and large rivers. To evaluate the present situation and to predict potential future effects of deforestation on the climatic conditions of this region, two, one-year model simulations were made. In the first, ``control simulation'', an attempt was made to match the existing surface vegetation. The biophysical parameters used were derived from recent studies of similar Amazon-region ecosystems. In the second run, ``deforested simulation'', the forested-area biophysical parameters were replaced by those corresponding to the pasture areas of the region. The higher-resolution regional modelling revealed important climatic features of the deforestation process, displaying some associated mesoscale effects that are not typically represented in similar Global Circulation Model simulations. Near coastal zones and along large rivers, deforestation resulted in reduced cloud cover and precipitation. However, increased cloud cover and precipitation was predicted over upland areas, especially on slopes facing river valleys. The modelled surface sensible and latent heat fluxes also presented both positive and negative anomalies. The magnitudes of these anomalies were greater during the dry season. Windspeed near the surface was the meteorological variable that presented the most significant change due to deforestation. The reduction in roughness coefficient resulting from the shift from forest to pasture produced increased windspeeds near the

  5. Paleosurfaces from northeastern Amazonia as a key for reconstructing paleolandscapes and understanding weathering products

    NASA Astrophysics Data System (ADS)

    Rossetti, Dilce F.

    2004-07-01

    The characterization and mapping of paleoweathering surfaces, as well as their associated deposits, throughout the northeastern Amazonia can be a useful tool for inter-basin stratigraphic correlations and for establishing the evolution of landscapes and climates through time. This type of investigation has led to the recognition of five weathering surfaces developed from the Upper Cretaceous through the Quaternary, designated here as S1 to S5. Surface S1 occurs at the top of Late Cretaceous deposits, represented by the Ipixuna/Cujupe succession, as well as on older Precambrian and Paleozoic rocks. Surface S2 marks the top of an indurated, massive, semi-flint unit. For cases in which surfaces S1 and S2 are amalgamated, a thick, lateritic paleosol displaying hexagonal, branched concretions is present. Surface S3 occurs at the top of the Pirabas and lower portion of the Barreiras Formations of Late Oligocene/Early Miocene age, and it is also associated with paleosol, but has no lateritization. When surface S3 is amalgamated with surfaces S1 and S2, bauxite is present in association with the underlying laterites. Surface S4 bounds the top of the middle to upper Barreiras Formation of Middle Miocene age, as well as correlatable deposits known as the Belterra Clay. This surface is marked by a lateritic paleosol having columnar concretions. Surface S5 occurs between a lower unit consisting of massive, light red sands of the Plio-Pleistocene Post-Barreiras 1 sediments and an upper unit of yellow, eolian sands of the Holocene Post-Barreiras 2 Sediments. The paleoweathering surfaces present in the northeastern Amazonia enable the reconstruction of several depositional episodes represented by thin (only few meters thick) sedimentary units from the Late Cretaceous to the Quaternary. The creation of new accommodation space on subsiding areas gave rise to sediment accumulation during transgressions. Intervening weathering surfaces formed during significant falls in relative sea

  6. Extreme seasonal droughts and floods in Amazonia: causes, trends and impacts

    NASA Astrophysics Data System (ADS)

    Marengo, J. A.

    2015-12-01

    J. A. Marengo * and J. C. Espinoza** * Centro Nacional de Monitoramento e Alerta de Desastres Naturais, Ministério da Ciência, Tecnologia e Inovação, Sao Paulo, Brazil ** Subdirección de Ciencias de la Atmósfera e Hidrósfera (SCAH), Instituto Geofísico del Perú, Lima, Peru This paper reviews recent progress in the study and understanding of extreme seasonal events in the Amazon region, focusing on drought and floods. The review includes a history of droughts and floods in the past, in the present and some discussions on future extremes in the context of climate change and its impacts on the Amazon region. Several extreme hydrological events, some of them characterized as 'once in a century', have been reported in the Amazon region during the last decade. While abundant rainfall in various sectors of the basin has determined extreme floods along the river's main stem in 1953, 1989, 1999, 2009, 2012-2015, deficient rainfall in 1912, 1926, 1963, 1980, 1983, 1995, 1997, 1998, 2005 and 2010 has caused anomalously low river levels, and an increase in the risk and number of fires in the region, with consequences for humans. This is consistent with changes in the variability of the hydrometeorology of the basin and suggests that extreme hydrological events have been more frequent in the last two decades. Some of these intense/reduced rainfalls and subsequent floods/droughts were associated (but not exclusively) with La Niña/El Niño events. In addition, moisture transport anomalies from the tropical Atlantic into Amazonia, and from northern to southern Amazonia alter the water cycle in the region year-to-year. We also assess the impacts of such extremes on natural and human systems in the region, considering ecological, economic and societal impacts in urban and rural areas, particularly during the recent decades. In the context of the future climate change, studies show a large range of uncertainty, but suggest that drought might intensify through the 21st

  7. Single-Dose Pharmacokinetics of Piperacillin/Tazobactam in Hispaniolan Amazon Parrots ( Amazona ventralis ).

    PubMed

    Carpenter, James W; Tully, Thomas N; Gehring, Ronette; Guzman, David Sanchez-Migallon

    2017-06-01

    To determine the pharmacokinetics of piperacillin/tazobactam in Hispaniolan Amazon parrots ( Amazona ventralis ), 8 healthy adult parrots of both sexes were used in a 2-part study. In a pilot study, piperacillin (87 mg/kg) in combination with tazobactam (11 mg/kg) was administered intramuscularly (IM) to 2 birds, and blood samples were obtained at 0, 0.5, 1, 1.5, 2, 3, 4, 6, 8, and 10 hours after administration. Based on the results obtained, a main study was done in which piperacillin/tazobactam was administered at 2 different doses. In 3 birds, the initial dose of piperacillin (87 mg/kg)/tazobactam (11 mg/kg) IM was administered, and in 3 birds, the dose was doubled to piperacillin (174 mg/kg)/tazobactam (22 mg/kg) IM. In all 6 birds, blood samples were obtained at 0, 5, 15, and 30 minutes and at 1, 1.5, 2, 2.5, 3, and 4 hours after administration. Quantification of plasma piperacillin and tazobactam concentrations was determined by validated liquid chromatography-mass spectrometry assay. Pharmacokinetic parameters were determined by noncompartmental analysis. After intramuscular administration, the mean ± standard error values of T1/2 (h) was 0.52 ± 0.05 and 0.32 ± 0.07, Tmax (h) was 0.28 ± 0.09 and 0.25 ± 0.10, Cmax (μg/mL) was 86.34 ± 20.62 and 9.03 ± 2.88, and Cmax/dose was 0.99 ± 0.24 and 0.83 ± 0.26 for piperacillin (87 mg/kg) and tazobactam (11 mg/kg), respectively. When the doses were doubled, the T1/2 (h) was 0.65 ± 0.08 and 0.34 ± 0.02, Tmax (h) was 0.28 ± 0.12 and 0.14 ± 0.06, Cmax (μg/mL) was 233.0 ± 6.08 and 22.13 ± 2.35, and Cmax/dose was 1.34 ± 0.03 and 1.02 ± 0.11 for piperacillin and tazobactam, respectively. Results indicate that piperacillin is rapidly absorbed and reaches high initial concentrations; however, it is also rapidly eliminated in the Hispaniolan Amazon parrot, and tazobactam has similar pharmacokinetics as piperacillin. Administration of piperacillin at 87 mg/kg IM q3-4h is recommended for this species to control

  8. Endophytic cultivable bacterial community obtained from the Paullinia cupana seed in Amazonas and Bahia regions and its antagonistic effects against Colletotrichum gloeosporioides.

    PubMed

    Silva, Maria Carolina Santos E; Polonio, Julio Cesar; Quecine, Maria Carolina; Almeida, Tiago Tognolli de; Bogas, Andréa Cristina; Pamphile, João Alencar; Pereira, José Odair; Astolfi-Filho, Spartaco; Azevedo, João Lucio

    2016-09-01

    Guarana (Paullinia cupana var. sorbilis) is a plant from the Amazonas region with socio-economic importance. However, guarana production has been increasingly affected by unfavorable conditions resulting from anthracnose, caused by the Colletotrichum fungal genus, which primarily affects mainly the Amazonas region. The aim of the present study was to isolate bacterial endophytes from the seeds of guarana plants obtained from Amazonas region and the Northeast state of Bahia, a region where this disease is not a problem for guarana plantations. The number of bacterial Colony Forming Units (CFU/g seeds) was 2.4 × 10(4) from the Bahia and 2.9 × 10(4) from the Amazonas region. One hundred and two isolated bacteria were evaluated in vitro against the phytopathogenic strain Colletotrichum gloeosporioides L1. These isolates were also analyzed for the enzymatic production of amylase, cellulase, protease, pectinase, lipase and esterase. Approximately 15% of isolates, showing high antagonistic activity, and the production of at least one enzyme were identified through the partial sequencing of 16S rDNA. The genus Bacillus was the most frequently observed, followed by Paenibacillus, Ochrobactrum, Microbacterium and Stenotrophomonas. Proteolytic activity was observed in 24 isolates followed by amylolytic, pectinolytic and cellulolytic activities. No esterase and lipase production was detected. Most of the isolates, showing antagonistic effects against C. gloeosporioides and high enzymatic activities, were isolated from the anthracnose-affected region. A biocontrol method using the endophytes from guarana seeds could be applied in the future, as these bacteria are vertically transferred to guarana seedlings. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Rupturing of Biological Spores As a Source of Secondary Particles in Amazonia

    SciTech Connect

    China, Swarup; Wang, Bingbing; Weis, Johannes; Rizzo, Luciana; Brito, Joel; Cirino, Glauber G.; Kovarik, Libor; Artaxo, Paulo; Gilles, Mary K.; Laskin, Alexander

    2016-11-15

    Airborne biological particles, such as fungal spores and pollen, are ubiquitous in the Earth’s atmosphere and play an important role in the atmospheric environment and climate, impacting air quality, cloud formation, and the Earth’s radiation budget. The atmospheric transformations of airborne biological spores at elevated relative humidity remain poorly understood and their climatic role is uncertain. Using an environmental scanning electron microscope (ESEM), we observed rupturing of Amazonian fungal spores and subsequent release of nanometer to submicron size fragments after exposure to high humidity. We find that fungal fragments contain elements of inorganic salts (e.g., Na and Cl). They are hygroscopic in nature with a growth factor up to 2.3 at 96% relative humidity, thus they may potentially influence cloud formation. Due to their hygroscopic growth, light scattering cross sections of the fragments are enhanced by up to a factor of 10. Furthermore, rupturing of fungal spores at high humidity may explain the bursting events of nanoparticles and may provide insight into new particle formation in Amazonia.

  10. Dietary practices and nutritional status of 0-24-month-old children from Brazilian Amazonia.

    PubMed

    Castro, T G; Baraldi, L G; Muniz, P T; Cardoso, M A

    2009-12-01

    To assess the nutritional status and dietary practices of 0-24-month-old children living in Brazilian Amazonia. Cross-sectional study. Information on children's dietary intakes was obtained from diet history data. Weight and length were measured for anthropometric evaluation. Fe status was assessed using fasting venous blood samples; Hb, serum ferritin and soluble transferrin receptor concentrations were measured. The towns of Assis Brasil and Acrelândia in the state of Acre, north-west Brazil. A total of sixty-nine randomly selected 0-24-month-old children. Of these children, 40.3 % were anaemic, 63.1 % were Fe-deficient, 28.1 % had Fe-deficiency anaemia and 11.6 % were stunted. Breast-feeding was initiated by 97.1 % of mothers, followed by early feeding with complementary foods. The dietary pattern reflected a high intake of carbohydrate-rich foods and cow's milk, with irregular intakes of fruit, vegetables and meat. All infants and 92.3 % of toddlers were at risk of inadequate Fe intakes. Fe from animal foods contributed on average 0.5 % and 14.3 % to total dietary Fe intake among infants and toddlers, respectively. Poor nutritional status and inadequate feeding practices in this study population reinforce the importance of exclusive breast-feeding during the first 6 months of life. Greater emphasis is required to improve the bioavailability of dietary Fe during complementary feeding practices.

  11. Mortality from contact-related epidemics among indigenous populations in Greater Amazonia

    PubMed Central

    Walker, Robert S.; Sattenspiel, Lisa; Hill, Kim R.

    2015-01-01

    European expansion and contact with indigenous populations led to catastrophic depopulation primarily through the introduction of novel infectious diseases to which native peoples had limited exposure and immunity. In the Amazon Basin such contacts continue to occur with more than 50 isolated indigenous societies likely to make further contacts with the outside world in the near future. Ethnohistorical accounts are useful for quantifying trends in the severity and frequency of epidemics through time and may provide insight into the likely demographic consequences of future contacts. Here we compile information for 117 epidemics that affected 59 different indigenous societies in Greater Amazonia and caused over 11,000 deaths between 1875 and 2008, mostly (75%) from measles, influenza, and malaria. Results show that mortality rates from epidemics decline exponentially through time and, independently, with time since peaceful contact. The frequency of documented epidemics also decreases with time since contact. While previous work on virgin soil epidemics generally emphasizes the calamity of contacts, we focus instead on improvements through time. The prospects for better survivorship during future contacts are good provided modern health care procedures are implemented immediately. PMID:26354026

  12. The legacy of the Pleistocene megafauna extinctions on nutrient availability in Amazonia

    NASA Astrophysics Data System (ADS)

    Doughty, Christopher E.; Wolf, Adam; Malhi, Yadvinder

    2013-09-01

    In the late Pleistocene, 97 genera of large animals went extinct, concentrated in the Americas and Australia. These extinctions had significant effects on ecosystem structure, seed dispersal and land surface albedo. However, the impact of this dramatic extinction on ecosystem nutrient biogeochemistry, through the lateral transport of dung and bodies, has never been explored. Here we analyse this process using a novel mathematical framework that analyses this lateral transport as a diffusion-like process, and we demonstrate that large animals play a disproportionately large role in the horizontal transfer of nutrients across landscapes. For example, we estimate that the extinction of the Amazonian megafauna decreased the lateral flux of the limiting nutrient phosphorus by more than 98%, with similar, though less extreme, decreases in all continents outside of Africa. This resulted in strong decreases in phosphorus availability in eastern Amazonia away from fertile floodplains, a decline which may still be ongoing. The current P limitation in the Amazon basin may be partially a relic of an ecosystem without the functional connectivity it once had. We argue that the Pleistocene megafauna extinctions resulted in large and ongoing disruptions to terrestrial biogeochemical cycling at continental scales and increased nutrient heterogeneity globally.

  13. Diversity of bats trypanosomes in hydroeletric area of Belo Monte in Brazilian Amazonia.

    PubMed

    da Costa, Andréa P; Nunes, Pablo Henrique; Leite, Beatriz Helena Santos; Ferreira, Juliana Isabel G da S; Tonhosolo, Renata; da Rosa, Adriana Ruckert; da Rocha, Patricio Adriano; Aires, Caroline Cotrim; Gennari, Solange Maria; Marcili, Arlei

    2016-12-01

    The Trypanosoma comprises flagellates able to infect many mammalian species and is transmitted by several groups of invertebrates. The order Chiroptera can be infected by the subgenera Herpetosoma, Schizotrypanum, Megatrypanum and Trypanozoon. In this study, we described the diversity of bats trypanosomes, inferring the phylogenetic relationships among the trypanosomes from bats caught Belo Monte Hydroeletric area (Brazilian Amazonia). Trypanosomes from bats were isolated by haemoculture, and the molecular phylogeny based on small subunit rDNA (SSU rDNA) and glycosomal-3-phosphate dehydrogenase (gGAPDH) gene sequences. Morphological characterization included light and scanning electron microscopy. A total of 157 bats were caught in the area belonging 6 Families (Emballonuridae, Furipteridae, Mormoopidae, Natalidae, Phyllostomidae and Vespertilionidae) and 34 species. The bat trypanosome prevalence, as evaluated through haemoculture, was 5,7%. Phylogenetic trees grouped the isolates in T. cruzi branch (TCI and TCbat lineage), T. cruzi marinkellei and Trypanosoma wauwau from Pteronotus parnellii. This is the first isolate from T. wauwau in Para state. The occurrence of T. cruzi in the ​​ Belo Monte Hydroeletric area (UHE Belo Monte) in Amazon/Brazil attentive to the risk of migration human population required for the works of the dam and new cities that grow in the vicinity of these businesses, but it is a zoonosis already known to the Amazon region, and the presence of unclassified Trypanosoma species, attend to the large parasitic biodiversity still unknown. Copyright © 2016 Elsevier B.V. All rights reserved.

  14. Microbial diversity of an anoxic zone of a hydroelectric power station reservoir in Brazilian Amazonia.

    PubMed

    Graças, Diego A; Miranda, Paulo R; Baraúna, Rafael A; McCulloch, John A; Ghilardi, Rubens; Schneider, Maria Paula C; Silva, Artur

    2011-11-01

    Microbial diversity was evaluated in an anoxic zone of Tucuruí Hydroelectric Power Station reservoir in Brazilian Amazonia using a culture-independent approach by amplifying and sequencing fragments of the 16S rRNA gene using metagenomic DNA as a template. Samples obtained from the photic, aphotic (40 m) and sediment (60 m) layers were used to construct six 16S rDNA libraries containing a total of 1,152 clones. The sediment, aphotic and photic layers presented 64, 33 and 35 unique archaeal operational taxonomic units (OTUs). The estimated richness of these layers was evaluated to be 153, 106 and 79 archaeal OTUs, respectively, using the abundance-based coverage estimator (ACE) and 114, 83 and 77 OTUs using the Chao1 estimator. For bacterial sequences, 114, 69 and 57 OTUs were found in the sediment, aphotic and photic layers, which presented estimated richnesses of 1,414, 522 and 197 OTUs (ACE) and 1,059, 1,014 and 148 OTUs (Chao1), respectively. Phylogenetic analyses of the sequences obtained revealed a high richness of microorganisms which participate in the carbon cycle, namely, methanogenic archaea and methanotrophic proteobacteria. Most sequences obtained belong to non-culturable prokaryotes. The present study offers the first glimpse of the huge microbial diversity of an anoxic area of a man-made lacustrine environment in the tropics.

  15. Tersilochinae of Western Amazonia (Hymenoptera: Ichneumonidae). Genus Stethantyx Townes, part 2.

    PubMed

    Khalaim, Andrey I; Sääksjärvi, Ilari E; Bordera, Santiago

    2015-07-02

    In this paper we describe four new species of Stethantyx Townes (Ichneumonidae: Tersilochinae) from Ecuador and Peru characterized by the fore wing with first and second abscissae of radius meeting at right angle: S. erwini Khalaim & Sääksjärvi, sp. nov., S. radiata Khalaim & Sääksjärvi, sp. nov., S. rufispa Khalaim & Bordera, sp. nov. and S. undulata Khalaim & Sääksjärvi, sp. nov. Second part of the key to species of Stethantyx occurring in Western Amazonia is given. Additionally, S. altamira Khalaim & Broad and S. aprica Khalaim & Broad are recorded from South America for the first time, and new data on distribution of S. alajuela Khalaim & Broad, S. amazonica Khalaim & Sääksjärvi, S. heredia Kha-laim & Broad, S. orellana Khalaim & Sääksjärvi, S. sinuata Khalaim & Sääksjärvi and S. trepida Khalaim & Sääksjärvi in South America are provided. Male of S. orellana is recorded for the first time.

  16. Environmental Costs of Government-Sponsored Agrarian Settlements in Brazilian Amazonia.

    PubMed

    Schneider, Maurício; Peres, Carlos A

    2015-01-01

    Brazil has presided over the most comprehensive agrarian reform frontier colonization program on Earth, in which ~1.2 million settlers have been translocated by successive governments since the 1970's, mostly into forested hinterlands of Brazilian Amazonia. These settlements encompass 5.3% of this ~5 million km2 region, but have contributed with 13.5% of all land conversion into agropastoral land uses. The Brazilian Federal Agrarian Agency (INCRA) has repeatedly claimed that deforestation in these areas largely predates the sanctioned arrival of new settlers. Here, we quantify rates of natural vegetation conversion across 1911 agrarian settlements allocated to 568 Amazonian counties and compare fire incidence and deforestation rates before and after the official occupation of settlements by migrant farmers. The timing and spatial distribution of deforestation and fires in our analysis provides irrefutable chronological and spatially explicit evidence of agropastoral conversion both inside and immediately outside agrarian settlements over the last decade. Deforestation rates are strongly related to local human population density and road access to regional markets. Agrarian settlements consistently accelerated rates of deforestation and fires, compared to neighboring areas outside settlements, but within the same counties. Relocated smallholders allocated to forest areas undoubtedly operate as pivotal agents of deforestation, and most of the forest clearance occurs in the aftermath of government-induced migration.

  17. Mortality from contact-related epidemics among indigenous populations in Greater Amazonia.

    PubMed

    Walker, Robert S; Sattenspiel, Lisa; Hill, Kim R

    2015-09-10

    European expansion and contact with indigenous populations led to catastrophic depopulation primarily through the introduction of novel infectious diseases to which native peoples had limited exposure and immunity. In the Amazon Basin such contacts continue to occur with more than 50 isolated indigenous societies likely to make further contacts with the outside world in the near future. Ethnohistorical accounts are useful for quantifying trends in the severity and frequency of epidemics through time and may provide insight into the likely demographic consequences of future contacts. Here we compile information for 117 epidemics that affected 59 different indigenous societies in Greater Amazonia and caused over 11,000 deaths between 1875 and 2008, mostly (75%) from measles, influenza, and malaria. Results show that mortality rates from epidemics decline exponentially through time and, independently, with time since peaceful contact. The frequency of documented epidemics also decreases with time since contact. While previous work on virgin soil epidemics generally emphasizes the calamity of contacts, we focus instead on improvements through time. The prospects for better survivorship during future contacts are good provided modern health care procedures are implemented immediately.

  18. Lipid Oxidation Inhibitory Effects and Phenolic Composition of Aqueous Extracts from Medicinal Plants of Colombian Amazonia

    PubMed Central

    Lizcano, Leandro J.; Viloria-Bernal, María; Vicente, Francisca; Berrueta, Luis Angel; Gallo, Blanca; Martínez-Cañamero, Magdalena; Ruiz-Larrea, Maria Begoña; Ruiz-Sanz, José Ignacio

    2012-01-01

    Diverse plants of ethnobotanic interest in Amazonia are commonly used in traditional medicine. We determined the antioxidant potential against lipid peroxidation, the antimicrobial activity, and the polyphenol composition of several Amazonian plants (Brownea rosademonte, Piper glandulosissimum, Piper krukoffii, Piper putumayoense, Solanum grandiflorum, and Vismia baccifera). Extracts from the plant leaf, bark, and stem were prepared as aqueous infusions, as used in folk medicine, and added to rat liver microsomes exposed to iron. The polyphenolic composition was detected by reverse-phase HPLC coupled to diode-array detector and MS/MS analysis. The antimicrobial activity was tested by the spot-on-a-lawn method against several indicator microorganisms. All the extracts inhibited lipid oxidation, except the P. glandulosissimum stem. The plant extracts exhibiting high antioxidant potential (V. baccifera and B. rosademonte) contained high levels of flavanols (particularly, catechin and epicatechin). By contrast, S. grandiflorum leaf, which exhibited very low antioxidant activity, was rich in hydroxycinnamic acids. None of the extracts showed antimicrobial activity. This study demonstrates for the first time the presence of bioactive polyphenolic compounds in several Amazonian plants, and highlights the importance of flavanols as major phenolic contributors to antioxidant activity. PMID:22754307

  19. Geographic distribution and demography of Pithecia aequatorialis (pitheciidae) in Peruvian Amazonia.

    PubMed

    Aquino, Rolando; Cornejo, Fanny M; Pezo Lozano, Etersit; Heymann, Eckhard W

    2009-12-01

    To study the geographic distribution and demographic characteristics of Pithecia aequatorialis in Peruvian Amazonia, we undertook surveys and transect census in three river basins (Río Itaya, Río Tigre and Río Curaray) between 2004 and 2008. A total of 123 groups of P. aequatorialis was encountered during 1623 km of transect walks. Group size was uniform among the three areas (3.4-3.6 individuals), but surprisingly, population densities were higher in the area with strong hunting pressure (Río Itaya: 7.8 ind./km(2), vs. 5.6 and 5.9 km(2) in the Río Tigre and Río Curaray basins, respectively). The most common group composition included an adult pair with one offspring. Groups with more than one adult male and/or female accounted for 35% of sightings. Our observations extend P. aequatorialis range in Peru further south to the area between the Río Tigre and Río Corrientes, but exclude the area to the north between the Río Curaray and Río Napo. These findings are in contrast to previous distribution maps. P. aequatorialis was rarely seen in interspecific association during our censuses.

  20. Molecular phylogeny and morphometric analyses reveal deep divergence between Amazonia and Atlantic Forest species of Dendrophryniscus.

    PubMed

    Fouquet, Antoine; Recoder, Renato; Teixeira, Mauro; Cassimiro, José; Amaro, Renata Cecília; Camacho, Agustín; Damasceno, Roberta; Carnaval, Ana Carolina; Moritz, Craig; Rodrigues, Miguel Trefaut

    2012-03-01

    Dendrophryniscus is an early diverging clade of bufonids represented by few small-bodied species distributed in Amazonia and the Atlantic Forest. We used mitochondrial (414 bp of 12S, 575 bp of 16S genes) and nuclear DNA (785 bp of RAG-1) to investigate phylogenetic relationships and the timing of diversification within the genus. These molecular data were gathered from 23 specimens from 19 populations, including eight out of the 10 nominal species of the genus as well as Rhinella boulengeri. Analyses also included sequences of representatives of 18 other bufonid genera that were publically available. We also examined morphological characters to analyze differences within Dendrophryniscus. We found deep genetic divergence between an Amazonian and an Atlantic Forest clade, dating back to Eocene. Morphological data corroborate this distinction. We thus propose to assign the Amazonian species to a new genus, Amazonella. The species currently named R. boulengeri, which has been previously assigned to the genus Rhamphophryne, is shown to be closely related to Dendrophryniscus species. Our findings illustrate cryptic trends in bufonid morphological evolution, and point to a deep history of persistence and diversification within the Amazonian and Atlantic rainforests. We discuss our results in light of available paleoecological data and the biogeographic patterns observed in other similarly distributed groups.

  1. Empty forest or empty rivers? A century of commercial hunting in Amazonia.

    PubMed

    Antunes, André P; Fewster, Rachel M; Venticinque, Eduardo M; Peres, Carlos A; Levi, Taal; Rohe, Fabio; Shepard, Glenn H

    2016-10-01

    The Amazon basin is the largest and most species-rich tropical forest and river system in the world, playing a pivotal role in global climate regulation and harboring hundreds of traditional and indigenous cultures. It is a matter of intense debate whether the ecosystem is threatened by hunting practices, whereby an "empty forest" loses critical ecological functions. Strikingly, no previous study has examined Amazonian ecosystem resilience through the perspective of the massive 20th century international trade in furs and skins. We present the first historical account of the scale and impacts of this trade and show that whereas aquatic species suffered basin-wide population collapse, terrestrial species did not. We link this differential resilience to the persistence of adequate spatial refuges for terrestrial species, enabling populations to be sustained through source-sink dynamics, contrasting with unremitting hunting pressure on more accessible aquatic habitats. Our findings attest the high vulnerability of aquatic fauna to unregulated hunting, particularly during years of severe drought. We propose that the relative resilience of terrestrial species suggests a marked opportunity for managing, rather than criminalizing, contemporary traditional subsistence hunting in Amazonia, through both the engagement of local people in community-based comanagement programs and science-led conservation governance.

  2. Party size and diet of syntopic atelids (Ateles chamek and Lagothrix cana) in Southwestern Brazilian Amazonia.

    PubMed

    Iwanaga, S; Ferrari, S F

    2001-01-01

    Syntopic Alouatta seniculus, Ateles chamek and Lagothrix cana (Atelidae) were studied in southwestern Amazonia. Primate populations were first surveyed, and then the party size, diet and vertical spacing were monitored over a 5-month period. Atelids accounted for more than half the survey sightings and Lagothrix was the most abundant. Party sizes recorded for both Alouatta and Lagothrix during monitoring were significantly larger than those recorded during surveys, but no such difference was found for Ateles. Monitored parties were significantly larger in Lagothrix in comparison with either Alouatta or Ateles, as were groups of Ateles in comparison with Alouatta. Mean party size in Ateles decreased progressively during the course of the study, from 8.9 +/- 3.4 in June to 3.9 +/- 2.3 in October. Moraceae was the most important dietary resource for Ateles and Lagothrix, in terms of both feeding records and number of species exploited. There was considerable overlap in the plant taxa exploited, but some notable differences, such as the exclusive use of Hymenaea courbaril (Caesalpinaceae) by Lagothrix and of Euterpe precatoria (Arecaceae) by Ateles. As at other sites in the region, Ateles occupied significantly higher forest strata in comparison with Lagothrix. Despite the preliminary nature of the study, the results indicate a number of ecological differences between species that undoubtedly play an important role in niche separation. Copyright 2001 S. Karger AG, Basel

  3. Regional-Scale Drivers of Forest Structure and Function in Northwestern Amazonia

    PubMed Central

    Higgins, Mark A.; Asner, Gregory P.; Anderson, Christopher B.; Martin, Roberta E.; Knapp, David E.; Tupayachi, Raul; Perez, Eneas; Elespuru, Nydia; Alonso, Alfonso

    2015-01-01

    Field studies in Amazonia have found a relationship at continental scales between soil fertility and broad trends in forest structure and function. Little is known at regional scales, however, about how discrete patterns in forest structure or functional attributes map onto underlying edaphic or geological patterns. We collected airborne LiDAR (Light Detection and Ranging) data and VSWIR (Visible to Shortwave Infrared) imaging spectroscopy measurements over 600 km2 of northwestern Amazonian lowland forests. We also established 83 inventories of plant species composition and soil properties, distributed between two widespread geological formations. Using these data, we mapped forest structure and canopy reflectance, and compared them to patterns in plant species composition, soils, and underlying geology. We found that variations in soils and species composition explained up to 70% of variation in canopy height, and corresponded to profound changes in forest vertical profiles. We further found that soils and plant species composition explained more than 90% of the variation in canopy reflectance as measured by imaging spectroscopy, indicating edaphic and compositional control of canopy chemical properties. We last found that soils explained between 30% and 70% of the variation in gap frequency in these forests, depending on the height threshold used to define gaps. Our findings indicate that a relatively small number of edaphic and compositional variables, corresponding to underlying geology, may be responsible for variations in canopy structure and chemistry over large expanses of Amazonian forest. PMID:25793602

  4. Environmental Costs of Government-Sponsored Agrarian Settlements in Brazilian Amazonia

    PubMed Central

    2015-01-01

    Brazil has presided over the most comprehensive agrarian reform frontier colonization program on Earth, in which ~1.2 million settlers have been translocated by successive governments since the 1970’s, mostly into forested hinterlands of Brazilian Amazonia. These settlements encompass 5.3% of this ~5 million km2 region, but have contributed with 13.5% of all land conversion into agropastoral land uses. The Brazilian Federal Agrarian Agency (INCRA) has repeatedly claimed that deforestation in these areas largely predates the sanctioned arrival of new settlers. Here, we quantify rates of natural vegetation conversion across 1911 agrarian settlements allocated to 568 Amazonian counties and compare fire incidence and deforestation rates before and after the official occupation of settlements by migrant farmers. The timing and spatial distribution of deforestation and fires in our analysis provides irrefutable chronological and spatially explicit evidence of agropastoral conversion both inside and immediately outside agrarian settlements over the last decade. Deforestation rates are strongly related to local human population density and road access to regional markets. Agrarian settlements consistently accelerated rates of deforestation and fires, compared to neighboring areas outside settlements, but within the same counties. Relocated smallholders allocated to forest areas undoubtedly operate as pivotal agents of deforestation, and most of the forest clearance occurs in the aftermath of government-induced migration. PMID:26247467

  5. Population Development of Zabrotes subfasciatus (Coleoptera: Chrysomelidae) in Landrace Bean Varieties Occurring in Southwestern Amazonia.

    PubMed

    Lopes, L M; Araújo, A E F; Santos, A C V; Santos, V B; Sousa, A H

    2016-02-01

    The common bean, Phaseolus vulgaris (L.), is one of the most important sources of protein worldwide, and Latin America is one of the recognized centers of diversity of this species. However, storage of this product after harvest is not feasible because of bruchid attacks. This study determined the accumulated normalized rate of emergence and the daily emergence rate of Zabrotes subfasciatus (Boheman) (Coleoptera: Chrysomelidae:Bruchinae) in five landrace varieties of common bean (BRL 01, SNA 01, RDR 01, RBC 01, and RBC 13) that occurin southwestern Amazonia. These varieties were selected for this study because they are well-distributed throughout the Amazonian communities. Beans of each variety were infested with 50 unsexed adults, and the insects were removed 13 d after beginning the bioassays. The adult progeny obtained from the feeding substrate were counted and removed every other day after the first emergence, until the end of the emergence period. Differences were observed in the calculated rates of development; however, the time required for development and emergence of the insects was independent. Of the five varieties of bean investigated, we observed that the RDR 01, BRL 01, and SNA 01 cultivars are resistant to Z. subfasciatus; the results indicate that the use of these three varieties can reduce problems associated with bruchid attacks and enable storage of the product after harvesting.

  6. Empty forest or empty rivers? A century of commercial hunting in Amazonia

    PubMed Central

    Antunes, André P.; Fewster, Rachel M.; Venticinque, Eduardo M.; Peres, Carlos A.; Levi, Taal; Rohe, Fabio; Shepard, Glenn H.

    2016-01-01

    The Amazon basin is the largest and most species-rich tropical forest and river system in the world, playing a pivotal role in global climate regulation and harboring hundreds of traditional and indigenous cultures. It is a matter of intense debate whether the ecosystem is threatened by hunting practices, whereby an “empty forest” loses critical ecological functions. Strikingly, no previous study has examined Amazonian ecosystem resilience through the perspective of the massive 20th century international trade in furs and skins. We present the first historical account of the scale and impacts of this trade and show that whereas aquatic species suffered basin-wide population collapse, terrestrial species did not. We link this differential resilience to the persistence of adequate spatial refuges for terrestrial species, enabling populations to be sustained through source-sink dynamics, contrasting with unremitting hunting pressure on more accessible aquatic habitats. Our findings attest the high vulnerability of aquatic fauna to unregulated hunting, particularly during years of severe drought. We propose that the relative resilience of terrestrial species suggests a marked opportunity for managing, rather than criminalizing, contemporary traditional subsistence hunting in Amazonia, through both the engagement of local people in community-based comanagement programs and science-led conservation governance. PMID:27757421

  7. Regional-scale drivers of forest structure and function in northwestern Amazonia.

    PubMed

    Higgins, Mark A; Asner, Gregory P; Anderson, Christopher B; Martin, Roberta E; Knapp, David E; Tupayachi, Raul; Perez, Eneas; Elespuru, Nydia; Alonso, Alfonso

    2015-01-01

    Field studies in Amazonia have found a relationship at continental scales between soil fertility and broad trends in forest structure and function. Little is known at regional scales, however, about how discrete patterns in forest structure or functional attributes map onto underlying edaphic or geological patterns. We collected airborne LiDAR (Light Detection and Ranging) data and VSWIR (Visible to Shortwave Infrared) imaging spectroscopy measurements over 600 km2 of northwestern Amazonian lowland forests. We also established 83 inventories of plant species composition and soil properties, distributed between two widespread geological formations. Using these data, we mapped forest structure and canopy reflectance, and compared them to patterns in plant species composition, soils, and underlying geology. We found that variations in soils and species composition explained up to 70% of variation in canopy height, and corresponded to profound changes in forest vertical profiles. We further found that soils and plant species composition explained more than 90% of the variation in canopy reflectance as measured by imaging spectroscopy, indicating edaphic and compositional control of canopy chemical properties. We last found that soils explained between 30% and 70% of the variation in gap frequency in these forests, depending on the height threshold used to define gaps. Our findings indicate that a relatively small number of edaphic and compositional variables, corresponding to underlying geology, may be responsible for variations in canopy structure and chemistry over large expanses of Amazonian forest.

  8. Changes in the physico-chemical properties of Amazonian aerosols from background conditions due to urban impacts in Central Amazonia.

    NASA Astrophysics Data System (ADS)

    Artaxo, P.; Barbosa, H. M.; Brito, J.; Carbone, S.; Fiorese, C.; Andre, B.; Rizzo, L. V.; Ditas, F.; Pöhlker, C.; Pöhlker, M. L.; Saturno, J.; Holanda, B. A.; Wang, J.; Souza, R. A. F. D.; Machado, L.; Andreae, M. O.; Martin, S. T.

    2016-12-01

    The GoAmazon 2014/15 experiment (Observations and Modeling of the Green Ocean Amazon) was a great opportunity to study how urbanization can change aerosol properties under pristine conditions in a tropical rain forest. The experiment took place from January 2014 to December 2015 in the vicinity of Manaus, Brazil, where several sampling stations were operated. Natural biogenic aerosol properties were studied in 3 sampling stations upwind of Manaus (ATTO (T0a), ZF2 (T0z) and EMBRAPA (T0e)). Urban impacted aerosols were analysed in two downwind sampling stations at Tiwa (T2) and Manacapuru (T3). Properties analysed were size distribution, scattering and absorption, composition, vertical profiles and others. Remote sensing measurements were done using AERONET and MODIS, while extensive ground based measurements were done in all sampling stations. Remote sensing measurements shows important changes in aerosol optical depth (AOD), especially in the aerosol absorption component. It was also observed a reduction in cloud droplet size downwind of Manaus for liquid phase clouds. Changes in particle number and size were also very significant, that reflected in changes in the aerosol radiative forcing (RF) before and after Manaus plume. In the dry season, an average RF of -24 w/m² was observed upwind, while -17 w/m² was observed downwind, due to large scale biomass burning aerosols. Single scattering albedo (SSA) at 550 nm changed from a high value of 0.96 upwind to 0.84 downwind due to the increase in absorbing aerosols in the wet season. In the dry season, SSA at 550nm changed from 0.95 to 0.87. Aerosol composition showed a large dominance of organic aerosols for all sites, accounting for 65-75% of PM1 non refractory aerosol. Most of these were secondary organic aerosol (SOA), with very low sulfate and nitrate concentrations. The influence of the Manaus plume on aerosol properties was more intense during the wet season, because in the dry season a significant amount of large scale biomass burning aerosol was observed for all GoAmazon 2014/15 sites.

  9. The igapó of the Negro River in central Amazonia: Linking late-successional inundation forest with fluvial geomorphology

    NASA Astrophysics Data System (ADS)

    Montero, Juan Carlos; Latrubesse, Edgardo M.

    2013-10-01

    Despite important progress on Amazonian floodplain research, the flooded forest of the Negro River "igapó" has been little investigated. In particular, no study has previously focused the linkage between fluvial geomorphology and the floristic variation across the course of the river. In this paper we describe and interpret relations between igapó forest, fluvial geomorphology and the spatial evolution of the igapó forest through the Holocene. Therefore, we investigate the effect of geomorphological units of the floodplain and channel patterns on tree diversity, composition and structural parameters of the late-successional igapó forest. Our results show that sites sharing almost identical flooding regime, exhibit variable tree assemblages, species richness and structural parameters such as basal area, tree density and tree heights, indicating a trend in which the geomorphologic styles seem to partially control the organization of igapó's tree communities. This can be also explained by the high variability of well-developed geomorphologic units in short distances and concentrated in small areas. In this dynamic the inputs from the species pool of tributary rivers play a crucial role, but also the depositional and erosional processes associated with the evolution of the floodplain during the Holocene may control floristic and structural components of the igapó forests. These results suggest that a comprehensive approach integrating floristic and geomorphologic methods is needed to understand the distribution of the complex vegetation patterns in complex floodplains such as the igapó of the Negro River. This combination of approaches may introduce a better comprehension of the temporal and spatial evolutionary analysis and a logic rationale to understand the vegetation distribution and variability in function of major landforms, soil distributions and hydrology. Thus, by integrating the past into macroecological analyses will sharpen our understanding of the underlying forces for contemporary floristic patterns along the inundation forests of the Negro River.

  10. Feeding ecology of Saguinus bicolor bicolor (Callitrichidae: Primates) in a relict forest in Manaus, Brazilian Amazonia.

    PubMed

    Egler, S G

    1992-01-01

    This study is part of a long-term ecological study of habitat and dietary requirements of the pied bare-face tamarin (Saguinus bicolor bicolor). One group was studied for 11 months in an area of secondary forest in a suburb of Manaus, Amazonas, Brazil. Three main vegetation types occurred inside the group's home range (12 ha): capoeira, older secondary forest and campinarana (white sand forest). The tamarins ate fruits (21 species), flowers (1 species), exudates (4 species), and arthropods (insects and spiders). They spent 14.3% of total activity time seeking and eating animal prey, and 9.9% feeding on plant material, mostly fruits. In general, fruits consumed were ripe, small and succulent. Trees used for feeding were low and had small crown diameters. Three plant species (Protium aracouchinni, Myrcia cf. fallax, and Couma utilis) were used intensively during the three seasons covered by the study period. The concentrated use of 3 fruit species, each for an extended period (one fruiting species per season), provided the tamarins with a regular food supply. Tamarins consumed exudates from holes in the bark of trees of the families Anacardiaceae and Vochysiaceae, as well as gum exuded from seed pods of Mimosaceae. Exudates were exploited during the dry season and at the beginning of the wet season. Group travel was primarily based on routes connecting the fruiting trees exploited, with foraging for animal prey occurring during travel. Tamarins searched for arthropods on trunks, branches and leaves and in trunk holes. The foraging and feeding tactics displayed by S. b. bicolor are closely linked to morphological characteristics (small size and weight, claw-like nails) that allowed access to energy-rich resources (arthropods and plant exudates) in different strata of the vegetation.

  11. Late Pleistocene-Holocene paleoclimate in southwestern Brazilian Amazonia with basis on floristic changes interpreted from isotope data

    NASA Astrophysics Data System (ADS)

    Rossetti, D. F.; Cohen, M. C. L.; Pessenda, L. C. R.

    2015-12-01

    Previous late Quaternary paleoclimatic interpretations in Amazonia have considered fluctuating dry to wet episodes with changes from savanna to forest, a view that concurs with other proposals of undisturbed rainforest despite global oscillations. Most of this debate is based on pollen data, but such elements are scarce in Amazonian sedimentary records. This work interprets vegetation in the Late Pleistocene and Holocene in a southwestern Amazonia lowland using δ13C, δ15N, C/N integrated with geomorphology, sedimentology and radiocarbon dating. The goal was to reconstruct vegetation changes through time and analyze their relation to climate and sedimentary dynamics. Fluvial channel and floodplain deposits with phytoplankton, as well as C3 and C4 land plants, were recorded. Between 42,033-43,168 cal yr BP and 34,804-35,584 cal yr BP, C4 land plants increased as a result of a climate drier than todaýs. However, wet climate prevailed from this time-frame until the onset of the Last Glaciation Maximum. In the Pleistocene/Holocene transition, there was an increased contribution of C4 land plants potentially related to dry episodes. However, the increased contribution of this type of land plant is not synchronous with Holocene dry episodes previously documented for the Amazonian lowland. On the other hand, it is remarkable that the record of this plant type was verified only in sites with modern grassland confined to fluvial paleo-landforms. Thus, rather than due to a dry climatic episode, the recorded grassland expansion and its maintenance up to the present time in the studied sites is more likely associated with the evolution of depositional environments, being coincidental with the progressive abandonment of fluvial systems. An important conclusion derived from the present work is that great care must be placed when reconstructing late Quaternary paleoclimate in Amazonia based on changes in floristic patterns, as they may be also a response to sedimentary dynamics.

  12. On the ability of a global atmospheric inversion to constrain variations of CO2 fluxes over Amazonia

    NASA Astrophysics Data System (ADS)

    Molina, L.; Broquet, G.; Imbach, P.; Chevallier, F.; Poulter, B.; Bonal, D.; Burban, B.; Ramonet, M.; Gatti, L. V.; Wofsy, S. C.; Munger, J. W.; Dlugokencky, E.; Ciais, P.

    2015-01-01

    The exchanges of carbon, water, and energy between the atmosphere and the Amazon Basin have global implications for current and future climate. Here, the global atmospheric inversion system of the Monitoring of Atmospheric Composition and Climate service (MACC) was used to further study the seasonal and interannual variations of biogenic CO2 fluxes in Amazonia. The system assimilated surface measurements of atmospheric CO2 mole fractions made over more than 100 sites over the globe into an atmospheric transport model. This study added four surface stations located in tropical South America, a region poorly covered by CO2 observations. The estimates of net ecosystem exchange (NEE) optimized by the inversion were compared to independent estimates of NEE upscaled from eddy-covariance flux measurements in Amazonia, and against reports on the seasonal and interannual variations of the land sink in South America from the scientific literature. We focused on the impact of the interannual variation of the strong droughts in 2005 and 2010 (due to severe and longer-than-usual dry seasons), and of the extreme rainfall conditions registered in 2009. The spatial variations of the seasonal and interannual variability of optimized NEE were also investigated. While the inversion supported the assumption of strong spatial heterogeneity of these variations, the results revealed critical limitations that prevent global inversion frameworks from capturing the data-driven seasonal patterns of fluxes across Amazonia. In particular, it highlighted issues due to the configuration of the observation network in South America and the lack of continuity of the measurements. However, some robust patterns from the inversion seemed consistent with the abnormal moisture conditions in 2009.

  13. On the ability of a global atmospheric inversion to constrain variations of CO2 fluxes over Amazonia

    NASA Astrophysics Data System (ADS)

    Molina, L.; Broquet, G.; Imbach, P.; Chevallier, F.; Poulter, B.; Bonal, D.; Burban, B.; Ramonet, M.; Gatti, L. V.; Wofsy, S. C.; Munger, J. W.; Dlugokencky, E.; Ciais, P.

    2015-07-01

    The exchanges of carbon, water and energy between the atmosphere and the Amazon basin have global implications for the current and future climate. Here, the global atmospheric inversion system of the Monitoring of Atmospheric Composition and Climate (MACC) service is used to study the seasonal and interannual variations of biogenic CO2 fluxes in Amazonia during the period 2002-2010. The system assimilated surface measurements of atmospheric CO2 mole fractions made at more than 100 sites over the globe into an atmospheric transport model. The present study adds measurements from four surface stations located in tropical South America, a region poorly covered by CO2 observations. The estimates of net ecosystem exchange (NEE) optimized by the inversion are compared to an independent estimate of NEE upscaled from eddy-covariance flux measurements in Amazonia. They are also qualitatively evaluated against reports on the seasonal and interannual variations of the land sink in South America from the scientific literature. We attempt at assessing the impact on NEE of the strong droughts in 2005 and 2010 (due to severe and longer-than-usual dry seasons) and the extreme rainfall conditions registered in 2009. The spatial variations of the seasonal and interannual variability of optimized NEE are also investigated. While the inversion supports the assumption of strong spatial heterogeneity of these variations, the results reveal critical limitations of the coarse-resolution transport model, the surface observation network in South America during the recent years and the present knowledge of modelling uncertainties in South America that prevent our inversion from capturing the seasonal patterns of fluxes across Amazonia. However, some patterns from the inversion seem consistent with the anomaly of moisture conditions in 2009.

  14. Disentangling the contribution of multiple land covers to fire-mediated carbon emissions in Amazonia during the 2010 drought.

    PubMed

    Anderson, Liana Oighenstein; Aragão, Luiz E O C; Gloor, Manuel; Arai, Egídio; Adami, Marcos; Saatchi, Sassan S; Malhi, Yadvinder; Shimabukuro, Yosio E; Barlow, Jos; Berenguer, Erika; Duarte, Valdete

    2015-10-01

    In less than 15 years, the Amazon region experienced three major droughts. Links between droughts and fires have been demonstrated for the 1997/1998, 2005, and 2010 droughts. In 2010, emissions of 510 ± 120 Tg C were associated to fire alone in Amazonia. Existing approaches have, however, not yet disentangled the proportional contribution of multiple land cover sources to this total. We develop a novel integration of multisensor and multitemporal satellite-derived data on land cover, active fires, and burned area and an empirical model of fire-induced biomass loss to quantify the extent of burned areas and resulting biomass loss for multiple land covers in Mato Grosso (MT) state, southern Amazonia-the 2010 drought most impacted region. We show that 10.77% (96,855 km(2)) of MT burned. We estimated a gross carbon emission of 56.21 ± 22.5 Tg C from direct combustion of biomass, with an additional 29.4 ± 10 Tg C committed to be emitted in the following years due to dead wood decay. It is estimated that old-growth forest fires in the whole Brazilian Legal Amazon (BLA) have contributed to 14.81 Tg of C (11.75 Tg C to 17.87 Tg C) emissions to the atmosphere during the 2010 fire season, with an affected area of 27,555 km(2). Total C loss from the 2010 fires in MT state and old-growth forest fires in the BLA represent, respectively, 77% (47% to 107%) and 86% (68.2% to 103%) of Brazil's National Plan on Climate Change annual target for Amazonia C emission reductions from deforestation.

  15. Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

    PubMed

    Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2016-06-07

    Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy.

  16. Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

    PubMed

    Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2016-06-07

    Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy.

  17. Synergistic impacts of deforestation, climate change and fire on the future biomes distribution in Amazonia

    NASA Astrophysics Data System (ADS)

    Sampaio, G.; Cardoso, M. F.; Nobre, C. A.; Salazar, L. F.

    2013-05-01

    Several studies indicate future increase of environmental risks for the ecosystems in the Amazon region as a result of climate and land-use change, and their synergistic interactions. Modeling studies (e.g. Oyama and Nobre 2004, Salazar et al. 2007, Malhi et al. 2008) project rapid and irreversible replacement of forests by savannas with large-scale losses of biodiversity and livelihoods for people in the region. This process is referred to as the Amazon Dieback, where accelerated plant mortality due to environmental changes lead to forest collapse and savannas expansion after "tipping points" in climate and land surface changes are achieved. In this study we performed new analyses to quantify how deforestation, climate change and fire may combine to affect the distribution of major biomes in Amazonia. Changes in land use consider deforestation scenarios of 0%, 20%, 40%, and 50% (Sampaio et al., 2007), with and without fires (Cardoso et al., 2008), under the two greenhouse gases scenarios B1 and A2 and three "representative concentration pathways" (RCPs): 2.6, 4.5 and 8.5, for years 2015-2034 and 2040-2059 ("2025" and "2050" time-slices), from IPCC AR4 and CMIP5. The results show that the area affected in scenarios A2 and RCP 8.5 is larger than in the climate scenario B1 and RCP 2.6, and in both cases the effect is progressively higher in time. Most important changes occur in the East and South of the Amazon, with replacement of tropical forest by seasonal forest and savanna. The effect of fire in this region is important in all scenarios. The Northwest Amazon presents the smallest changes in the area of tropical forest, indicating that even for substantial land-use modifications and global climate change, the resulting atmospheric conditions would still support tropical forest in the region. In summary, we conclude that the synergistic combination of deforestation, climate change resulting from global warming, and the potential for higher fire occurrence may lead

  18. a Bayesian Approach for Calibration of Trmm 3B42 Over North Amazonia

    NASA Astrophysics Data System (ADS)

    Linguet, L.; Marie-Joseph, I.; Becker, M.; Seyler, F.

    2013-12-01

    Northern Amazonian regions experience extremes conditions like floods and droughts. These regions are also characterized by the limited spatial coverage of ground based rain gauges, and unavailability of real-time rainfall data. Satellite-based rainfall estimates (SRE) may be one of the best and appropriate approaches in detecting rainfall distribution. However SRE data need specific calibration and validation for use in flood and drought monitoring activities. This study aimed to calibrate of TRMM 3B42 RT rainfall products over northern Amazonia with a Bayesian filtering approach [1] [2]. The study area is located north of the Amazon River and includes the three Guianas and northern states of Brazil. A set of daily satellite rainfall products with spatial resolution of 0.25°x0.25° (TRMM 3B42 RT) from the year 2000 to 2010 has been selected. Ground reference data are located in French Guiana (27 ground stations from French national meteorological agency) and in the northern Brazilian states (70 ground stations from Brazilian Agência Nacional de Aguas). A lot of bias-adjustment methods rely on computing the difference between satellite and gauge-based precipitation [3] [4]. In this study we defend the idea that an inverse approach based on sequential Monte Carlo filtering helps to calibrate of TRMM 3B42 RT rainfall products. The developed method combines a model of the rainfall process at rain gauge locations with a stochastic observation model based on the joint distribution between ground reference data of the state variable (rainfall data) and the observed satellite data. 50% of the total ground based rainfall measurements were used for the joint distribution and the remaining 50% were used for validation purposes. Validation of the method has been done by comparing the corrected satellite data against independent observed data from rain gauges using the standard verification techniques: mean bias error, root mean square error, and correlation coefficient

  19. Regional CO2 fluxes for eastern Amazonia derived from aircraft vertical profiles

    NASA Astrophysics Data System (ADS)

    Gatti, L. V.; Miller, J. B.; D'Amelio, M. T.; Wofsy, S.; Tans, P.

    2008-12-01

    We have determined regional scale (~105 - 106 km2) CO2 fluxes using atmospheric measurements from aircraft vertical profiles over eastern Amazonia (site SAN: 02°51'S; 54°57'W). Profiles started December 2000 and have continued through 2008. 17 air samples per profile were collected aboard light aircraft between the surface and 4-5 km using the NOAA/ESRL semi- automatic portable flask package. We use a column integration technique to determine the CO2 flux for each vertical profile, where the measured CO2 profile is differenced from a CO2 background, which was determined using co-measured SF6 as a transport tracer. Two NOAA/ESRL background sites, Ascension Island (ASC) located in the Atlantic Ocean (8°S, 14°W) and Barbados (RPB) located in the Atlantic Ocean (12°N, 59°W) were used to calculate the fractions of air arriving at the sites studied. Back trajectories from the HYSPLIT model were calculated for every profile every 500m of altitude to determine the time the air mass took to travel between the coast and SAN. The observed flux, which is representative of that between the coast and measurement sites, averaged -0.03 ± 1.5 g C m-2day-1 for the wet season and 0.3 ± 0.9 g C m-2day-1 for the dry season. The flux variability is high, probably reflecting the dynamic nature of the response of the terrestrial biosphere to environmental conditions. We have attempted to remove the influence of biomass burning from the fluxes using measurements of co-measured CO. This reduces the dry season flux to -0.04 ± 1.2 g C m- 2day-1. We will compare these results to the seasonality found in eddy covariance measurements and to that estimated from models of the terrestrial biosphere.

  20. The Challenges from Extreme Climate Events for Sustainable Development in Amazonia: the Acre State Experience

    NASA Astrophysics Data System (ADS)

    Araújo, M. D. N. M.

    2015-12-01

    In the past ten years Acre State, located in Brazil´s southwestern Amazonia, has confronted sequential and severe extreme events in the form of droughts and floods. In particular, the droughts and forest fires of 2005 and 2010, the 2012 flood within Acre, the 2014 flood of the Madeira River which isolated Acre for two months from southern Brazil, and the most severe flooding throughout the state in 2015 shook the resilience of Acrean society. The accumulated costs of these events since 2005 have exceeded 300 million dollars. For the last 17 years, successive state administrations have been implementing a socio-environmental model of development that strives to link sustainable economic production with environmental conservation, particularly for small communities. In this context, extreme climate events have interfered significantly with this model, increasing the risks of failure. The impacts caused by these events on development in the state have been exacerbated by: a) limitations in monitoring; b) extreme events outside of Acre territory (Madeira River Flood) affecting transportation systems; c) absence of reliable information for decision-making; and d) bureaucratic and judicial impediments. Our experience in these events have led to the following needs for scientific input to reduce the risk of disasters: 1) better monitoring and forecasting of deforestation, fires, and hydro-meteorological variables; 2) ways to increase risk perception in communities; 3) approaches to involve more effectively local and regional populations in the response to disasters; 4) more accurate measurements of the economic and social damages caused by these disasters. We must improve adaptation to and mitigation of current and future extreme climate events and implement a robust civil defense, adequate to these new challenges.

  1. A 6900-year history of landscape modification by humans in lowland Amazonia

    NASA Astrophysics Data System (ADS)

    Bush, M. B.; Correa-Metrio, A.; McMichael, C. H.; Sully, S.; Shadik, C. R.; Valencia, B. G.; Guilderson, T.; Steinitz-Kannan, M.; Overpeck, J. T.

    2016-06-01

    A sedimentary record from the Peruvian Amazon provided evidence of climate and vegetation change for the last 6900 years. Piston cores collected from the center of Lake Sauce, a 20 m deep lake at 600 m elevation, were 19.7 m in length. The fossil pollen record showed a continuously forested catchment within the period of the record, although substantial changes in forest composition were apparent. Fossil charcoal, found throughout the record, was probably associated with humans setting fires. Two fires, at c. 6700 cal BP and 4270 cal BP, appear to have been stand-replacing events possibly associated with megadroughts. The fire event at 4270 cal BP followed a drought that caused lowered lake levels for several centuries. The successional trajectories of forest recovery following these large fires were prolonged by smaller fire events. Fossil pollen of Zea mays (cultivated maize) provided evidence of agricultural activity at the site since c. 6320 cal BP. About 5150 years ago, the lake deepened and started to deposit laminated sediments. Maize agriculture reached a peak of intensity between c. 3380 and 700 cal BP. Fossil diatom data provided a proxy for lake nutrient status and productivity, both of which peaked during the period of maize cultivation. A marked change in land use was evident after c. 700 cal BP when maize agriculture was apparently abandoned at this site. Iriartea, a hyperdominant of riparian settings in western Amazonia, increased in abundance within the last 1100 years, but declined markedly at c. 1070 cal BP and again between c. 80 and -10 cal BP.

  2. Polyspecific associations between squirrel monkeys (Saimiri sciureus) and other primates in eastern Amazonia.

    PubMed

    Pinheiro, Tatyana; Ferrari, Stephen F; Lopes, Maria Aparecida

    2011-11-01

    One of the most common types of polyspecific association observed in Neotropical primate communities is that between squirrel monkeys (Saimiri) and capuchins (Cebus). The present study focused on association patterns in two Saimiri sciureus groups in eastern Brazilian Amazonia, between March and October, 2009. The associations were analyzed in terms of the species involved, the degree of association, and niche breadth and overlap. The study involved two S. sciureus groups (B4 and GI) on the right and left bank of the Tocantins River, respectively, within the area of the Tucuruí reservoir in southeastern Pará. Relations between species were classified as associations (individuals within 50 m and moving in the same direction), and encounters (individuals within 50 m and no coordinated movement). Group B4 was in association with Cebus apella during 100% of monitoring, and with Chiropotes satanas in 20.2%. By contrast, Group GI associated with Cebus 54.8% of the time, and with Chiropotes utahickae 2.5%. Encounters with Alouatta belzebul and Saguinus niger were recorded at both sites, with Aotus azarae and Dasyprocta prymnolopha at B4, and with Callicebus moloch, Dasyproct aleporina, Mazama gouazoubira, and Nasua nasua at GI. Overall, Saimiri had a broader niche than Cebus in terms of vertical spacing and diet, but not for substrate use. This pattern did not appear to be affected by association. While group GI spent significantly (P < 0.05) more time in association with Cebus during the wet season, group B4 associated with Chiropotes more during the dry season. Despite the higher association rates, niche overlap was greater for all variables at B4. This may reflect differences in the ranging and foraging patterns at the two sites, and the varying potential benefits of association for Saimiri. © 2011 Wiley Periodicals, Inc.

  3. Ecological speciation in the tropics: insights from comparative genetic studies in Amazonia

    PubMed Central

    Beheregaray, Luciano B.; Cooke, Georgina M.; Chao, Ning L.; Landguth, Erin L.

    2015-01-01

    Evolution creates and sustains biodiversity via adaptive changes in ecologically relevant traits. Ecologically mediated selection contributes to genetic divergence both in the presence or absence of geographic isolation between populations, and is considered an important driver of speciation. Indeed, the genetics of ecological speciation is becoming increasingly studied across a variety of taxa and environments. In this paper we review the literature of ecological speciation in the tropics. We report on low research productivity in tropical ecosystems and discuss reasons accounting for the rarity of studies. We argue for research programs that simultaneously address biogeographical and taxonomic questions in the tropics, while effectively assessing relationships between reproductive isolation and ecological divergence. To contribute toward this goal, we propose a new framework for ecological speciation that integrates information from phylogenetics, phylogeography, population genomics, and simulations in evolutionary landscape genetics (ELG). We introduce components of the framework, describe ELG simulations (a largely unexplored approach in ecological speciation), and discuss design and experimental feasibility within the context of tropical research. We then use published genetic datasets from populations of five codistributed Amazonian fish species to assess the performance of the framework in studies of tropical speciation. We suggest that these approaches can assist in distinguishing the relative contribution of natural selection from biogeographic history in the origin of biodiversity, even in complex ecosystems such as Amazonia. We also discuss on how to assess ecological speciation using ELG simulations that include selection. These integrative frameworks have considerable potential to enhance conservation management in biodiversity rich ecosystems and to complement historical biogeographic and evolutionary studies of tropical biotas. PMID:25653668

  4. The costs of evaluating species densities and composition of snakes to assess development impacts in amazonia.

    PubMed

    Fraga, Rafael de; Stow, Adam J; Magnusson, William E; Lima, Albertina P

    2014-01-01

    Studies leading to decision-making for environmental licensing often fail to provide accurate estimates of diversity. Measures of snake diversity are regularly obtained to assess development impacts in the rainforests of the Amazon Basin, but this taxonomic group may be subject to poor detection probabilities. Recently, the Brazilian government tried to standardize sampling designs by the implementation of a system (RAPELD) to quantify biological diversity using spatially-standardized sampling units. Consistency in sampling design allows the detection probabilities to be compared among taxa, and sampling effort and associated cost to be evaluated. The cost effectiveness of detecting snakes has received no attention in Amazonia. Here we tested the effects of reducing sampling effort on estimates of species densities and assemblage composition. We identified snakes in seven plot systems, each standardised with 14 plots. The 250 m long centre line of each plot followed an altitudinal contour. Surveys were repeated four times in each plot and detection probabilities were estimated for the 41 species encountered. Reducing the number of observations, or the size of the sampling modules, caused significant loss of information on species densities and local patterns of variation in assemblage composition. We estimated the cost to find a snake as $ 120 U.S., but general linear models indicated the possibility of identifying differences in assemblage composition for half the overall survey costs. Decisions to reduce sampling effort depend on the importance of lost information to target-issues, and may not be the preferred option if there is the potential for identifying individual snake species requiring specific conservation actions. However, in most studies of human disturbance on species assemblages, it is likely to be more cost-effective to focus on other groups of organisms with higher detection probabilities.

  5. Increased Wildfire Risk Driven by Climate and Development Interactions in the Bolivian Chiquitania, Southern Amazonia.

    PubMed

    Devisscher, Tahia; Anderson, Liana O; Aragão, Luiz E O C; Galván, Luis; Malhi, Yadvinder

    2016-01-01

    Wildfires are becoming increasingly dominant in tropical landscapes due to reinforcing feedbacks between land cover change and more severe dry conditions. This study focused on the Bolivian Chiquitania, a region located at the southern edge of Amazonia. The extensive, unique and well-conserved tropical dry forest in this region is susceptible to wildfires due to a marked seasonality. We used a novel approach to assess fire risk at the regional level driven by different development trajectories interacting with changing climatic conditions. Possible future risk scenarios were simulated using maximum entropy modelling with presence-only data, combining land cover, anthropogenic and climatic variables. We found that important determinants of fire risk in the region are distance to roads, recent deforestation and density of human settlements. Severely dry conditions alone increased the area of high fire risk by 69%, affecting all categories of land use and land cover. Interactions between extreme dry conditions and rapid frontier expansion further increased fire risk, resulting in potential biomass loss of 2.44±0.8 Tg in high risk area, about 1.8 times higher than the estimates for the 2010 drought. These interactions showed particularly high fire risk in land used for 'extensive cattle ranching', 'agro-silvopastoral use' and 'intensive cattle ranching and agriculture'. These findings have serious implications for subsistence activities and the economy in the Chiquitania, which greatly depend on the forestry, agriculture and livestock sectors. Results are particularly concerning if considering the current development policies promoting frontier expansion. Departmental protected areas inhibited wildfires when strategically established in areas of high risk, even under drought conditions. However, further research is needed to assess their effectiveness accounting for more specific contextual factors. This novel and simple modelling approach can inform fire and land

  6. The Temporal Scale of Holocene Climatic Variability: From the Galapagos to Amazonia

    NASA Astrophysics Data System (ADS)

    Bush, M. B.; Restrepo, A.; Correa, A.; Ford, R.; Valencia, B.; Gosling, W.; Silman, M.; Conroy, J.; Overpeck, J. T.

    2006-12-01

    High-resolution lake cores from the Andes and Amazonian lowlands of W. South America and the Galapagos Islands provide new insights into the Holocene climate history of this region and its interactions with Pacific climate drivers. Our data reveal that a major drought event reported broadly from the Andes and Amazonia in the early to mid-Holocene is actually a complex series of droughts with wet interludes. These results suggest strong climatic instability prior to c. 5600 cal. yr BP. Establishment of wetter conditions at our Andean study site at c. 5600 cal. yr BP correspond to the start of Quinoa cultivation. A similar pattern of higher lake levels coinciding with the local spread of agriculture is also evident in the lowlands. Within an overall pattern of progressively wetter conditions over the last 4000 years there are periods of pronounced climatic instability (drought and flood). Fossil pollen, charcoal, sediment color, and carbon content identify periods of peak erosion between c. 900 and 1100 cal. yr BP. On the Galapagos Islands, a subdecadally resolved analysis of fossil pollen provides a striking pattern of climatic change and human-induced alteration of the landscape. Prior to the period of transforming human activity, the fossil pollen record contains a multidecadal oscillation, with wavlet analysis evealing a quasi- periodicty of c. 60 years. Andean pollen are readily identifible in the Galapagos record and transport of mainland pollen to the islands has varied markedly within the past millennium. These multiproxy records reveal the dynamic nature of Holocene climates in the tropics and the impact those changes have had on people and landscapes.

  7. Increased Wildfire Risk Driven by Climate and Development Interactions in the Bolivian Chiquitania, Southern Amazonia

    PubMed Central

    Devisscher, Tahia; Anderson, Liana O.; Aragão, Luiz E. O. C.; Galván, Luis; Malhi, Yadvinder

    2016-01-01

    Wildfires are becoming increasingly dominant in tropical landscapes due to reinforcing feedbacks between land cover change and more severe dry conditions. This study focused on the Bolivian Chiquitania, a region located at the southern edge of Amazonia. The extensive, unique and well-conserved tropical dry forest in this region is susceptible to wildfires due to a marked seasonality. We used a novel approach to assess fire risk at the regional level driven by different development trajectories interacting with changing climatic conditions. Possible future risk scenarios were simulated using maximum entropy modelling with presence-only data, combining land cover, anthropogenic and climatic variables. We found that important determinants of fire risk in the region are distance to roads, recent deforestation and density of human settlements. Severely dry conditions alone increased the area of high fire risk by 69%, affecting all categories of land use and land cover. Interactions between extreme dry conditions and rapid frontier expansion further increased fire risk, resulting in potential biomass loss of 2.44±0.8 Tg in high risk area, about 1.8 times higher than the estimates for the 2010 drought. These interactions showed particularly high fire risk in land used for ‘extensive cattle ranching’, ‘agro-silvopastoral use’ and ‘intensive cattle ranching and agriculture’. These findings have serious implications for subsistence activities and the economy in the Chiquitania, which greatly depend on the forestry, agriculture and livestock sectors. Results are particularly concerning if considering the current development policies promoting frontier expansion. Departmental protected areas inhibited wildfires when strategically established in areas of high risk, even under drought conditions. However, further research is needed to assess their effectiveness accounting for more specific contextual factors. This novel and simple modelling approach can inform fire

  8. The Costs of Evaluating Species Densities and Composition of Snakes to Assess Development Impacts in Amazonia

    PubMed Central

    de Fraga, Rafael; Stow, Adam J.; Magnusson, William E.; Lima, Albertina P.

    2014-01-01

    Studies leading to decision-making for environmental licensing often fail to provide accurate estimates of diversity. Measures of snake diversity are regularly obtained to assess development impacts in the rainforests of the Amazon Basin, but this taxonomic group may be subject to poor detection probabilities. Recently, the Brazilian government tried to standardize sampling designs by the implementation of a system (RAPELD) to quantify biological diversity using spatially-standardized sampling units. Consistency in sampling design allows the detection probabilities to be compared among taxa, and sampling effort and associated cost to be evaluated. The cost effectiveness of detecting snakes has received no attention in Amazonia. Here we tested the effects of reducing sampling effort on estimates of species densities and assemblage composition. We identified snakes in seven plot systems, each standardised with 14 plots. The 250 m long centre line of each plot followed an altitudinal contour. Surveys were repeated four times in each plot and detection probabilities were estimated for the 41 species encountered. Reducing the number of observations, or the size of the sampling modules, caused significant loss of information on species densities and local patterns of variation in assemblage composition. We estimated the cost to find a snake as $ 120 U.S., but general linear models indicated the possibility of identifying differences in assemblage composition for half the overall survey costs. Decisions to reduce sampling effort depend on the importance of lost information to target-issues, and may not be the preferred option if there is the potential for identifying individual snake species requiring specific conservation actions. However, in most studies of human disturbance on species assemblages, it is likely to be more cost-effective to focus on other groups of organisms with higher detection probabilities. PMID:25147930

  9. Tropical Timber Rush in Peruvian Amazonia: Spatial Allocation of Forest Concessions in an Uninventoried Frontier

    NASA Astrophysics Data System (ADS)

    Salo, Matti; Toivonen, Tuuli

    2009-10-01

    Land-use allocation has important implications for the conservation and management of tropical forests. Peru’s forestry regime has recently been reformed and more than 7 million ha has been assigned as forest concessions. This potentially has a drastic impact on the land-use practices and species composition of the assigned areas. Nevertheless, the environmental variation found within the concessions and the process applied to delimit them are poorly studied and documented. Thus, it is difficult to estimate the biological impacts of forestry activities in concessions or plan them sustainably. This paper reveals the characteristics of the current concession allocation in Loreto, Peruvian Amazonia, using environmental and access-related variables and compares the concessions to other major land-use assignments. The work draws on a number of data sets describing land-use, ecosystem diversity, and fluvial network in the region. According to our data, certain environment types such as relatively fertile Pebas soils are overrepresented in the concessions, while others, like floodplain forests, are underrepresented in comparison to other land-use assignments. Concessions also have less anthropogenic disturbance than other areas. Furthermore, concessions are located on average further from the river network than the other land-use assignments studied. We claim that forest classification based on productivity, soil fertility, accessibility, and biodiversity patterns is an achievable long-term goal for forest authorities in Peru, and in many other tropical countries. We present a rough design of a geographic information system incorporating environmental, logging, and access-related data that could be applied to approach this goal in Peru.

  10. Ecological speciation in the tropics: insights from comparative genetic studies in Amazonia.

    PubMed

    Beheregaray, Luciano B; Cooke, Georgina M; Chao, Ning L; Landguth, Erin L

    2014-01-01

    Evolution creates and sustains biodiversity via adaptive changes in ecologically relevant traits. Ecologically mediated selection contributes to genetic divergence both in the presence or absence of geographic isolation between populations, and is considered an important driver of speciation. Indeed, the genetics of ecological speciation is becoming increasingly studied across a variety of taxa and environments. In this paper we review the literature of ecological speciation in the tropics. We report on low research productivity in tropical ecosystems and discuss reasons accounting for the rarity of studies. We argue for research programs that simultaneously address biogeographical and taxonomic questions in the tropics, while effectively assessing relationships between reproductive isolation and ecological divergence. To contribute toward this goal, we propose a new framework for ecological speciation that integrates information from phylogenetics, phylogeography, population genomics, and simulations in evolutionary landscape genetics (ELG). We introduce components of the framework, describe ELG simulations (a largely unexplored approach in ecological speciation), and discuss design and experimental feasibility within the context of tropical research. We then use published genetic datasets from populations of five codistributed Amazonian fish species to assess the performance of the framework in studies of tropical speciation. We suggest that these approaches can assist in distinguishing the relative contribution of natural selection from biogeographic history in the origin of biodiversity, even in complex ecosystems such as Amazonia. We also discuss on how to assess ecological speciation using ELG simulations that include selection. These integrative frameworks have considerable potential to enhance conservation management in biodiversity rich ecosystems and to complement historical biogeographic and evolutionary studies of tropical biotas.

  11. Environmental impacts of Brazil's Tucuruí Dam: unlearned lessons for hydroelectric development in Amazonia.

    PubMed

    Fearnside, P M

    2001-03-01

    Brazil's Tucuruí Dam provides valuable lessons for improving decision-making on major public works in Amazonia and elsewhere. Together with social impacts, which were reviewed in a companion paper, the project's environmental costs are substantial. Monetary costs include costs of construction and maintenance and opportunity costs of natural resources (such as timber) and of the money invested by the Brazilian government. Environmental costs include forest loss, leading to both loss of natural ecosystems and to greenhouse gas emissions. Aquatic ecosystems are heavily affected by the blockage of fish migration and by creation of anoxic environments. Decay of vegetation left in the reservoir creates anoxic water that can corrode turbines, as well as producing methane and providing conditions for methylation of mercury. Defoliants were considered for removing forest in the submergence area but plans were aborted amid a public controversy. Another controversy surrounded impacts of defoliants used to prevent regrowth along the transmission line. Mitigation measures included archaeological and faunal salvage and creation of a "gene bank" on an island in the reservoir. Decision-making in the case of Tucuruí was virtually uninfluenced by environmental studies, which were done concurrently with construction. The dam predates Brazil's 1986 requirement of an Environmental Impact Assessment. Despite limitations, research results provide valuable information for future dams. Extensive public-relations use of the research effort and of mitigation measures such as faunal salvage were evident. Decision-making was closely linked to the influence of construction firms, the military, and foreign financial interests in both the construction project and the use of the resulting electrical power (most of which is used for aluminum smelting). Social and environmental costs received virtually no consideration when decisions were made, an outcome facilitated by a curtain of secrecy

  12. Trends in streamflow and rainfall in tropical South America: Amazonia, eastern Brazil, and northwestern Peru

    NASA Astrophysics Data System (ADS)

    Marengo, José A.; Tomasella, Javier; Uvo, Cintia R.

    1998-01-01

    Long hydrological records, from the Amazon Basin, northeastern Brazil, and northwestern Peru spanning most of this century, are examined for trends in rainfall (three wettest months) and runoff (three months of highest flow) or stage, where no rating curves exist. Trends are tested for significance using the Mann-Kendall statistic. In basins where large soil, aquifer, or man-made reservoirs give rise to appreciable over-year storage, flows and water levels may be serially correlated. Where serial correlation exists, the usual statistical tests (linear regression, t-test, and Mann-Kendall) will overestimate the significance of trends, showing significance where none exists. Analysis for trend therefore requires particular care when data are serially correlated, and to avoid misleading results, additional supportive evidence must be sought. For example, rainfall records within the same river basin can be checked for trends; serial correlation in rainfall records, in particular, is less likely to be present, so the validity of any trends in rainfall is less open to question. Strong negative trends were found in flow data from the coast of northern Peru and the São Francisco River, while positive significant trends were detected in the Parnaíba River basin. No significant trends were found in the discharge or stage records from Amazonia, while rainfall in northeastern Brazil shows a slow increase over long periods. In the Parnaíba and in some rivers of northern Peru unusually large discharges at the beginning or end of the records seem to account for the direction and significance of trends.

  13. Fish consumption during pregnancy, mercury transfer, and birth weight along the Madeira River Basin in Amazonia.

    PubMed

    Marques, Rejane C; Bernardi, José V E; Dórea, José G; Brandão, Katiane G; Bueno, Lucélia; Leão, Renata S; Malm, Olaf

    2013-05-28

    Birth weight can be a predictor of maternal health issues related to nutrition and environmental contaminants. Total hair mercury (HHg) concentration was studied as an indicator of both fish consumption and methylmercury exposure in mothers (and newborns) living in selected low income areas of the Madeira River basin, Amazonia, Brazil. This cohort study (n = 1,433) consisted of traditional riverines (n = 396), riverines who had moved to urban (n = 676) and rural (n = 67) settings, and tin miner settlers (n = 294). Median maternal HHg was significantly different (p = 0.00001) between riverine (12.1 µg·g-1), rural (7.82 µg·g-1), urban (5.4 µg·g-1), and tin miner (4.5 µg·g-1) groups studied. The same trend (of medians) was observed for newborns' HHg which also showed significant differences between riverine (3.0 µg·g-1), rural (2.0 µg·g-1), urban (1.5 µg·g-1), and tin miner (0.8 µg·g-1) groups. The correlation between maternal and newborn HHg was statistically significant in the riverine (r = 0.8952; p = 0.0001), urban (r = 0.6744; p = 0.0001), and rural (r = 0.8416; p = 0.0001) groups but not in the mother-infant pairs in the tin miner group (r = 0.0638; p = 0.2752). Birth weight was significantly different among groups but did not show a pattern consistent with that of fish consumption (and HHg). A multiple regression analysis showed that only family income and gestational age had a significant impact on birth weight. Maternal HHg is an important biomarker of maternal fish consumption and of methylmercury exposure during pregnancy. However, in these Amazonian groups, only maternal education and gestational age seemed to affect birth weight positively.

  14. WRF EMS model High resolution simulations over river-urban area in Amazonia

    NASA Astrophysics Data System (ADS)

    Tota, J.; Lima, K.; Silva, R. D.; Kuhn, P. F.

    2014-12-01

    The increasing of population and size of cities in Brazil is more and more common ultimate, even in remote location like Amazon Rainforest region, e.g. Manaus, Belem. Predicting the weather and climate in large cities is remains a challenge because there are diverse processes and factors that determine or influence atmospheric condition at various time and space scales. Consequently, it is necessary to understand the mechanisms of connection between local climate (influenced by urbanization) and those due to larger scales. The weather and microclimate over Santarém city in Amazonia is poor studied and monitored. The application of meteorological models, which representing the diverse atmospheric processes at the various scales, is essential, as e.g. WRF EMS model. The addition of spatial scale data is needed for validation of these models over cities. In this paper, we describe the application of the WRF EMS model (Weather Research and Forecasting) to represent the urban-scale atmospheric conditions (1km resolution) over the Santarem city. The model was validated against observed 2 meter air temperature obtained from several points and spatial rainfall over urbanized zones of Santarém. Thermal conditions and gradients of temperature over forested and non-forested zones were clear represented by the model. The WRF model reproduces well rainfall patterns around the urban area and Tapajós river-city contacts. The main results for this model test was the Improvements in the representation of the types of land cover-Land change from the mosaics structures on the city domain, what permit all errors/bias are reduced.

  15. Modern pollen-rain characteristics of tall terra firme moist evergreen forest, southern Amazonia

    NASA Astrophysics Data System (ADS)

    Gosling, William D.; Mayle, Francis E.; Tate, Nicholas J.; Killeen, Timothy J.

    2005-11-01

    The paucity of modern pollen-rain data from Amazonia constitutes a significant barrier to understanding the Late Quaternary vegetation history of this globally important tropical forest region. Here, we present the first modern pollen-rain data for tall terra firme moist evergreen Amazon forest, collected between 1999 and 2001 from artificial pollen traps within a 500 × 20 m permanent study plot (14°34'50″S, 60°49'48″W) in Noel Kempff Mercado National Park (NE Bolivia). Spearman's rank correlations were performed to assess the extent of spatial and inter-annual variability in the pollen rain, whilst statistically distinctive taxa were identified using Principal Components Analysis (PCA). Comparisons with the floristic and basal area data of the plot (stems ≥10 cm d.b.h.) enabled the degree to which taxa are over/under-represented in the pollen rain to be assessed (using R-rel values). Moraceae/Urticaceae dominates the pollen rain (64% median abundance) and is also an important constituent of the vegetation, accounting for 16% of stems ≥10 cm d.b.h. and ca. 11% of the total basal area. Other important pollen taxa are Arecaceae (cf. Euterpe), Melastomataceae/Combretaceae, Cecropia, Didymopanax, Celtis, and Alchornea. However, 75% of stems and 67% of the total basal area of the plot ≥10 cm d.b.h. belong to species which are unidentified in the pollen rain, the most important of which are Phenakospermum guianensis (a banana-like herb) and the key canopy-emergent trees, Erisma uncinatum and Qualea paraensis.

  16. Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America

    PubMed Central

    Mirabello, Lisa; Vineis, Joseph H; Yanoviak, Stephen P; Scarpassa, Vera M; Póvoa, Marinete M; Padilla, Norma; Achee, Nicole L; Conn, Jan E

    2008-01-01

    Background Anopheles darlingi is the most important malaria vector in the Neotropics. An understanding of A. darlingi's population structure and contemporary gene flow patterns is necessary if vector populations are to be successfully controlled. We assessed population genetic structure and levels of differentiation based on 1,376 samples from 31 localities throughout the Peruvian and Brazilian Amazon and Central America using 5–8 microsatellite loci. Results We found high levels of polymorphism for all of the Amazonian populations (mean RS = 7.62, mean HO = 0.742), and low levels for the Belize and Guatemalan populations (mean RS = 4.3, mean HO = 0.457). The Bayesian clustering analysis revealed five population clusters: northeastern Amazonian Brazil, southeastern and central Amazonian Brazil, western and central Amazonian Brazil, Peruvian Amazon, and the Central American populations. Within Central America there was low non-significant differentiation, except for between the populations separated by the Maya Mountains. Within Amazonia there was a moderate level of significant differentiation attributed to isolation by distance. Within Peru there was no significant population structure and low differentiation, and some evidence of a population expansion. The pairwise estimates of genetic differentiation between Central America and Amazonian populations were all very high and highly significant (FST = 0.1859 – 0.3901, P < 0.05). Both the DA and FST distance-based trees illustrated the main division to be between Central America and Amazonia. Conclusion We detected a large amount of population structure in Amazonia, with three population clusters within Brazil and one including the Peru populations. The considerable differences in Ne among the populations may have contributed to the observed genetic differentiation. All of the data suggest that the primary division within A. darlingi corresponds to two white gene genotypes between Amazonia (genotype 1) and

  17. Learning to Question: The Roles of Multiple Hypotheses, Successive Approximations, Balloons and Toilet Paper in University Science Programs of Southwestern Amazonia

    ERIC Educational Resources Information Center

    Brown, I. Foster

    2008-01-01

    Learning to question is essential for determining pathways of conservation and development in southwestern Amazonia during a time of rapid global environmental change. Teaching such an approach in graduate science programs in regional universities can be done using play-acting and simulation exercises. Multiple working hypotheses help students…

  18. Trypanosoma cruzi in Brazilian Amazonia: Lineages TCI and TCIIa in wild primates, Rhodnius spp. and in humans with Chagas disease associated with oral transmission.

    PubMed

    Marcili, Arlei; Valente, Vera C; Valente, Sebastião A; Junqueira, Angela C V; da Silva, Flávia Maia; Pinto, Ana Yecê das Neves; Naiff, Roberto D; Campaner, Marta; Coura, José R; Camargo, Erney P; Miles, Michael A; Teixeira, Marta M G

    2009-04-01

    In this study, we provide phylogenetic and biogeographic evidence that the Trypanosoma cruzi lineages T. cruzi I (TCI) and T. cruzi IIa (TCIIa) circulate amongst non-human primates in Brazilian Amazonia, and are transmitted by Rhodnius species in overlapping arboreal transmission cycles, sporadically infecting humans. TCI presented higher prevalence rates, and no lineages other than TCI and TCIIa were found in this study in wild monkeys and Rhodnius from the Amazonian region. We characterised TCI and TCIIa from wild primates (16 TCI and five TCIIa), Rhodnius spp. (13 TCI and nine TCIIa), and humans with Chagas disease associated with oral transmission (14 TCI and five TCIIa) in Brazilian Amazonia. To our knowledge, TCIIa had not been associated with wild monkeys until now. Polymorphisms of ssrDNA, cytochrome b gene sequences and randomly amplified polymorphic DNA (RAPD) patterns clearly separated TCIIa from TCIIb-e and TCI lineages, and disclosed small intra-lineage polymorphisms amongst isolates from Amazonia. These data are important in understanding the complexity of the transmission cycles, genetic structure, and evolutionary history of T. cruzi populations circulating in Amazonia, and they contribute to both the unravelling of human infection routes and the pathological peculiarities of Chagas disease in this region.

  19. Learning to Question: The Roles of Multiple Hypotheses, Successive Approximations, Balloons and Toilet Paper in University Science Programs of Southwestern Amazonia

    ERIC Educational Resources Information Center

    Brown, I. Foster

    2008-01-01

    Learning to question is essential for determining pathways of conservation and development in southwestern Amazonia during a time of rapid global environmental change. Teaching such an approach in graduate science programs in regional universities can be done using play-acting and simulation exercises. Multiple working hypotheses help students…

  20. A palaeomagnetic and 40Ar/39Ar study of late precambrian sills in the SW part of the Amazonian craton: Amazonia in the Rodinia reconstruction

    NASA Astrophysics Data System (ADS)

    Elming, S.-Å.; D'Agrella-Filho, M. S.; Page, L. M.; Tohver, E.; Trindade, R. I. F.; Pacca, I. I. G.; Geraldes, M. C.; Teixeira, W.

    2009-07-01

    A new key palaeomagnetic pole (Plat. = 64.3°S, Plon. = 271.0°E, N = 14, A95 = 9.2° Q = 5) is calculated from a primary magnetization isolated in early Neoproterozoic Aguapei basic sills and dykes hosted by 1.3-1.0 Ga sedimentary rocks from the southwestern part of the Amazon craton. The characteristic remanence carried by stable, pseudo-single domain titanomagnetite shows two antipodal polarities that pass a reversals test. Magnetic anisotropy for most sites shows fabric orientations that are typical of sills, with horizontal magnetic foliations concordant to the flat-lying bedding of the host sedimentary rocks. 40Ar/39Ar analyses for one of the sills reveal a well-defined plateau age at 981 +/- 2 Myr. A tectonic reconstruction for Amazonia relative Laurentia based on this new pole `is consistent with' a position of the present northwestern part of Amazonia attached with eastern Laurentia close to Greenland at ca. 981 Ma. On basis of palaeomagnetic and geological data, we propose a scenario where Amazonia moved northeastwards along the present southeast coast of Laurentia from ca. 1200 to 980 Ma. By 980 Ma, Amazonia is placed alongside Laurentia and Baltica, in a position similar to other reconstructions of Rodinia but with a significantly different orientation.

  1. On the Miocene Cyprideis species flock (Ostracoda; Crustacea) of Western Amazonia (Solimões Formation): Refining taxonomy on species level

    PubMed Central

    Gross, Martin; Ramos, Maria Ines F.; Piller, Werner E.

    2016-01-01

    The Miocene mega-wetland of western Amazonia holds a diverse, largely endemic ostracod fauna. Among them, especially the genus Cyprideis experienced a remarkable radiation. Micropalaeontologic investigations of a 400 m long sediment core (~62 km SW Benjamin Constant, Amazonia, Brazil) permitted a taxonomic revision of about two-thirds of hitherto described Cyprideis species. We evaluate the diagnostic value of shell characters and provide an extensive illustration of the intraspecific variability of species. Based on comparative morphology, the 20 recorded Cyprideis species are arranged in groups and subgroups. The “smooth” group comprises C. amazonica, C. kotzianae, C. kroemmelbeini, C. machadoi, C. multiradiata, C. olivencai, C. paralela and C. simplex; the “ornate” group C. curucae nom. nov., C. cyrtoma, C. aff. graciosa, C. inversa, C. ituiae n. sp., C. matorae n. sp., C. minipunctata, C. munoztorresi nom. nov., C. pebasae, C. reticulopunctata, C. schedogymnos and C. sulcosigmoidalis. Five species have been revalidated, two renamed, two synonymised and two are new descriptions. Along with 10 further formally established species, for which a review is pending, Cyprideis keeps at least 30 endemic species in that region during Miocene times. Up to 12 Cyprideis species have been found to occur sympatrically, representing >90 % of the entire ostracod fauna. Ostracod index species enable a biostratigraphic allocation of the well succession to the Cyprideis minipunctata to Cyprideis cyrtoma biozones, corresponding to a late Middle to early Late Miocene age (late Serravallian–early Tortonian). PMID:25543674

  2. On the Miocene Cyprideis species flock (Ostracoda; Crustacea) of Western Amazonia (Solimões Formation): Refining taxonomy on species level.

    PubMed

    Gross, Martin; Ramos, Maria Ines F; Piller, Werner E

    2014-12-18

    The Miocene mega-wetland of western Amazonia holds a diverse, largely endemic ostracod fauna. Among them, especially the genus Cyprideis experienced a remarkable radiation. Micropalaeontologic investigations of a 400 m long sediment core (~62 km SW Benjamin Constant, Amazonia, Brazil) permitted a taxonomic revision of about two-thirds of hitherto described Cyprideis species. We evaluate the diagnostic value of shell characters and provide an extensive illustration of the intraspecific variability of species. Based on comparative morphology, the 20 recorded Cyprideis species are arranged in groups and subgroups. The "smooth" group comprises C. amazonica, C. kotzianae, C. kroemmelbeini, C. machadoi, C. multiradiata, C. olivencai, C. paralela and C. simplex; the "ornate" group C. curucae nom. nov., C. cyrtoma, C. aff. graciosa, C. inversa, C. ituiae n. sp., C. matorae n. sp., C. minipunctata, C. munoztorresi nom. nov., C. pebasae, C. reticulopunctata, C. schedogymnos and C. sulcosigmoidalis. Five species have been revalidated, two renamed, two synonymised and two are new descriptions. Along with 10 further formally established species, for which a review is pending, Cyprideis keeps at least 30 endemic species in that region during Miocene times. Up to 12 Cyprideis species have been found to occur sympatrically, representing >90% of the entire ostracod fauna. Ostracod index species enable a biostratigraphic allocation of the well succession to the Cyprideis minipunctata to Cyprideis cyrtoma biozones, corresponding to a late Middle to early Late Miocene age (late Serravallian-early Tortonian).

  3. Soil-vegetation relationships on a banded ironstone 'island', Carajás Plateau, Brazilian Eastern Amazonia.

    PubMed

    Nunes, Jaquelina A; Schaefer, Carlos E G R; Ferreira Júnior, Walnir G; Neri, Andreza V; Correa, Guilherme R; Enright, Neal J

    2015-01-01

    Vegetation and soil properties of an iron-rich canga (laterite) island on the largest outcrop of banded-iron formation in Serra de Carajás (eastern Amazonia, Brazil) were studied along a topographic gradient (738-762 m asl), and analyzed to test the hypothesis that soil chemical and physical attributes play a key role in the structure and floristic composition of these plant communities. Soil and vegetation were sampled in eight replicate plots within each of the four vegetation types. Surface (0-10 cm) soil samples from each plot were analyzed for basic cations, N, P and plant species density for all species was recorded. CCA ordination analysis showed a strong separation between forest and non-forest sites on the first axis, and between herbaceous and shrubby campo rupestre on the second axis. The four vegetation types shared few plant species, which was attributed to their distinctive soil environments and filtering of their constituent species by chemical, physical and hydrological constraints. Thus, we can infer that Edaphic (pedological) factors are crucial in explaining the types and distributions of campo rupestre vegetation associated with ferruginous ironstone uplands (Canga) in Carajás, eastern Amazonia, therefore the soil properties are the main drivers of vegetation composition and structure on these ironstone islands.

  4. [Causes of death among patients with acquired immunodeficiency syndrome autopsied at the Tropical Medicine Foundation of Amazonas].

    PubMed

    Souza, Sílvia Leopoldina Santos de; Feitoza, Pablo Vinícius Silveira; Araújo, José Ribamar de; Andrade, Rosilene Viana de; Ferreira, Luiz Carlos de Lima

    2008-01-01

    The aim of this study was to investigate the causes of death among 129 AIDS patients that were autopsied at the Tropical Medicine Foundation of Amazonas between 1996 and 2003. The degree of concordance between the autopsy diagnoses and the clinical diagnoses was observed. The disease that most frequently caused death was tuberculosis (28%), followed by bacterial pneumonia (17%), histoplasmosis (13%), toxoplasmosis (10%), pneumocystosis (8%), cryptococcosis (5%), bacterial sepsis (4%) and other causes (15%). The concordance between the clinical diagnosis before death and the autopsy was 51.9%. The main organ involved was the lungs (82.2%). The length of survival from the time of the laboratory diagnosis to death ranged from one month to 120 months. The mean length of survival was 15 days and 56% died less than one month after the diagnosis, while 15 patients died on the same day that they were diagnosed. These results show the importance of autopsies in elucidating the causes of death among AIDS patients.

  5. [Sandfly fauna (Diptera: Psychodidae) in a focus of American cutaneous leishmaniasis on the urban periphery of Manaus, State of Amazonas].

    PubMed

    Barbosa, Maria das Graças Vale; Fé, Nelson Ferreira; Marcião, Alexandre Herculano Ribera; Silva, Ana Paula Thome; Monteiro, Wuelton Marcelo; Guerra, Jorge Augusto de Oliveira

    2008-01-01

    From August 2001 to July 2002, sand flies were collected from the bases of trees and, using CDC and Disney traps, from areas surrounding homes and forested areas in the São João community, on the urban periphery of Manaus, State of Amazonas. 4,104 specimens belonging to four subtribes, 13 genera and 49 species of the Phlebotominae subfamily were collected. The subtribe Psychodopygina predominated, with 3,403 (83%) specimens, especially of Nyssomyia umbratilis, Nyssomyia anduzei, Trichophoromyia eurypyga, Bichromomyia olmeca nociva and Bichromomyia flaviscutellata. The occurrences of Nyssomyia umbratilis and Nyssomyia anduzei, which have been incriminated as vectors for Leishmania (Viannia) guyanensis, and of Bichromomyia flaviscutellata and Bichromomyia olmeca nociva, for Leishmania (Leishmania) amazonensis, indicate that there is a risk of infection for people living in this area. Most (98.5%) of the sand flies were caught in the forested area. Nyssomyia anduzei and Bichromomyia olmeca nociva were collected from areas surrounding homes. The richness of vector species for Leishmania in this area shows the need for constant entomological surveillance.

  6. Frequency and aetiology of dermatophytosis in children age 12 and under in the state of Amazonas, Brazil.

    PubMed

    Cortez, Ana Cláudia A; de Souza, João Vicente B; Sadahiro, Aya; de Oliveira, José Augusto A

    2012-01-01

    Few scientific studies have evaluated dermatophytosis among children in the state of Amazonas or in the greater northern region of Brazil. The aim of this study was to research the frequency and aetiology of dermatophytosis in children age 12 and under, who were seen between March 1996 and November 2005 at the Mycology Laboratory of the National Institute of Amazonian Research. For mycological diagnoses, epidermal scales and/or hairs were used. A portion of this material was treated with potassium hydroxide for direct examination, and another portion was cultivated in Mycobiotic Agar for the isolation of dermatophytes. Of the 590 samples analysed, 210 showed positive diagnoses by direct examination and cultivation. Tinea capitis (153 cases) was the most frequent type of dermatophytosis, and Trichophyton tonsurans (121 cases) was the most frequently isolated fungal agent. Tinea corporis was observed in 48 cases where the most frequently isolated fungal agent was also T. tonsurans (17 cases), and the corporal regions most affected were the face, arms and trunk. The laboratory confirmed tinea pedis in 6 cases, and the principal fungal agents isolated were Trichophyton rubrum (3) and Trichophyton mentagrophytes (3). The presence of tinea cruris was confirmed in 3 cases, and T. rubrum, T. tonsurans and Epidermophyton floccosum were isolated from these cases. The children examined were primarily affected by tinea capitis, and the main fungal agent for this dermatophytosis was T. tonsurans. Copyright © 2011 Revista Iberoamericana de Micología. Published by Elsevier Espana. All rights reserved.

  7. [Provision and utilization of dental services in Amazonas State, Brazil: a case study in a riverine population in Coari municipality].

    PubMed

    Cohen-Carneiro, Flávia; Souza-Santos, Reinaldo; Pontes, Danielson Guedes; Salino, Alessandra Valle; Rebelo, Maria Augusta Bessa

    2009-08-01

    This case study described the conditions in the provision and utilization of dental services in two riverine populations in the municipality (county) of Coari, Amazonas State, Brazil. Structured questionnaires were applied to individuals 18 years and older to measure dental services utilization rates. Semi-structured interviews were also conducted with key informants to characterize the provision of such services. Although the bivariate analysis did not detect any statistically significant differences, residents of the area farthest from the county seat had gone more time since their last dental visit and received less care from public health services and riverboat clinics. The qualitative analysis showed: no permanent dental services in the communities; sporadic services provided by riverboat clinics, with less frequent visits to the remotest community; high transportation cost for river-dwellers to seek treatment in the county seat; and dental treatment focused on pain control, mainly through tooth extraction. Limited access to dental services for riverine populations highlights the need to implement comprehensive health promotion measures and expand the availability of services.

  8. Measuring the Level of Agreement Between Cloacal Gram's Stains and Bacterial Cultures in Hispaniolan Amazon Parrots ( Amazona ventralis ).

    PubMed

    Evans, Erika E; Mitchell, Mark A; Whittington, Julia K; Roy, Alma; Tully, Thomas N

    2014-12-01

    Cloacal or fecal Gram's stains and bacterial cultures are routinely performed during avian physical examinations to assess the microbial flora of the gastrointestinal tract. Although cloacal or fecal Gram's stains and bacterial cultures are considered routine diagnostic procedures, the level of agreement between the individual tests has not been determined. To investigate the level of agreement between results from Gram's stain and bacterial culture when used to assess cloacal or fecal samples from psittacine birds, samples were taken from 21 clinically healthy Hispaniolan Amazon parrots ( Amazona ventralis ) and tested by Gram's stain cytology and bacterial culture. Most bacteria (97.2%) identified by Gram's stain were gram positive. However, gram-negative organisms were identified in 7 of 21 (33.3%; 95% confidence interval: 13.3%-53.3%) birds. Escherichia coli was the only gram-negative organism identified on culture. Agreement between results of Gram's stain and culture was fair (weighted κ = 0.27). The results of this study suggest that Gram's stains and bacterial culture may need to be performed with a parallel testing strategy to limit the likelihood of misclassifying the microbial flora of psittacine patients.

  9. The Efficacy and Safety of Topical Rocuronium Bromide to Induce Bilateral Mydriasis in Hispaniolan Amazon Parrots ( Amazona ventralis ).

    PubMed

    Baine, Katherine; Hendrix, Diane V H; Kuhn, Sonia E; Souza, Marcy J; Jones, Michael P

    2016-03-01

    The efficacy and safety of topically applied rocuronium in Hispaniolan Amazon parrots ( Amazona ventralis ) was assessed in a group of 10 adult birds. A complete ophthalmic examination (including Schirmer tear test, ocular reflexes, applanation tonometry, fluorescein staining, and slit-lamp biomicroscopy) was performed, and rocuronium bromide (0.15 mg in both eyes) was administered. Pupillary light reflex (PLR) and pupillary diameter were recorded in a darkened room at the following time points: 0, 10, 20, 30, 40, 50, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 300, and 360 minutes, and 24 hours. Fluorescein staining in both eyes was performed at 24 hours. By 10 minutes, PLR was absent in all birds (at 5 minutes, 8 birds; at 10 minutes, remaining 2 birds). Pupil diameter differed significantly from baseline at all time points. Additionally, PLR was decreased in 7/10 birds at 360 minutes and normal in all birds at 24 hours. Superficial corneal ulceration was observed at 24 hours in the left eye of 2/10 of the birds after fluorescein stain application. This study demonstrated that rocuronium bromide was an effective mydriatic agent in Hispaniolan Amazon parrots with rapid onset and prolonged duration of action.

  10. Sedation and physiologic response to manual restraint after intranasal administration of midazolam in Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Mans, Christoph; Guzman, David Sanchez-Migallon; Lahner, Lesanna L; Paul-Murphy, Joanne; Sladky, Kurt K

    2012-09-01

    Administration of intranasal midazolam (2 mg/kg) was evaluated for sedation and effects on cloacal temperature, respiratory rate, and heart rate in manually restrained Hispaniolan Amazon parrots (Amazona ventralis). Adult parrots (n=9) were administered either midazolam (2 mg/kg) or an equal volume of saline solution intranasally before a 15-minute manual restraint in a complete crossover study. Respiratory rate and sedation scores were recorded before and during capture and during and after 15 minutes of manual restraint. Heart rate and cloacal temperature were recorded during manual restraint. After restraint, the parrots received intranasal flumazenil (0.05 mg/kg) or an equal volume of saline solution, and the recovery time was recorded. In those birds that received midazolam, sedation was observed within 3 minutes of administration, and vocalization, flight, and defense responses were significantly reduced during capture. During manual restraint, the mean rate of cloacal temperature increase was significantly slower and remained significantly lower in birds that received midazolam compared with controls. Mean respiratory rates were significantly lower for up to 12 minutes in parrots that received midazolam compared with those receiving saline solution. Flumazenil antagonized the effects of midazolam within 10 minutes. No overt clinical adverse effects to intranasal midazolam and flumazenil administration were observed. Further studies on the safety of intranasal midazolam and flumazenil in this species are warranted.

  11. Duet function in the yellow-naped amazon, Amazona auropalliata: evidence from playbacks of duets and solos.

    PubMed

    Dahlin, Christine R; Wright, Timothy F

    2012-01-01

    The question of why animals participate in duets is an intriguing one, as many such displays appear to be more costly to produce than individual signals. Mated pairs of yellow-naped amazons, Amazona auropalliata, give duets on their nesting territories. We investigated the function of those duets with a playback experiment. We tested two hypotheses for the function of those duets: the joint territory defense hypothesis and the mate-guarding hypothesis, by presenting territorial pairs with three types of playback treatments: duets, male solos, and female solos. The joint territory defense hypothesis suggests that individuals engage in duets because they appear more threatening than solos and are thus more effective for the establishment, maintenance and/or defense of territories. It predicts that pairs will be coordinated in their response (pair members approach speakers and vocalize together) and will either respond more strongly (more calls and/or more movement) to duet treatments than to solo treatments, or respond equally to all treatments. Alternatively, the mate-guarding hypothesis suggests that individuals participate in duets because they allow them to acoustically guard their mate, and predicts uncoordinated responses by pairs, with weak responses to duet treatments and stronger responses by individuals to solos produced by the same sex. Yellow-naped amazon pairs responded to all treatments in an equivalently aggressive and coordinated manner by rapidly approaching speakers and vocalizing more. These responses generally support the joint territory defense hypothesis and further suggest that all intruders are viewed as a threat by resident pairs.

  12. Performance on the Hamilton search task, and the influence of lateralization, in captive orange-winged Amazon parrots (Amazona amazonica).

    PubMed

    Cussen, Victoria A; Mench, Joy A

    2014-07-01

    Psittacines are generally considered to possess cognitive abilities comparable to those of primates. Most psittacine research has evaluated performance on standardized complex cognition tasks, but studies of basic cognitive processes are limited. We tested orange-winged Amazon parrots (Amazona amazonica) on a spatial foraging assessment, the Hamilton search task. This task is a standardized test used in human and non-human primate studies. It has multiple phases, which require trial and error learning, learning set breaking, and spatial memory. We investigated search strategies used to complete the task, cognitive flexibility, and long-term memory for the task. We also assessed the effects of individual strength of motor lateralization (foot preference) and sex on task performance. Almost all (92%) of the parrots acquired the task. All had significant foot preferences, with 69% preferring their left foot, and showed side preferences contralateral to their preferred limb during location selection. The parrots were able to alter their search strategies when reward contingencies changed, demonstrating cognitive flexibility. They were also able to remember the task over a 6-month period. Lateralization had a significant influence on learning set acquisition but no effect on cognitive flexibility. There were no sex differences. To our knowledge, this is the first cognitive study using this particular species and one of the few studies of cognitive abilities in any Neotropical parrot species.

  13. Crop damage of Eriotheca gracilipes (Bombacaceae) by the Blue-Fronted Amazon (Amazona aestiva, Psittacidae), in the Brazilian Cerrado.

    PubMed

    Ragusa-Netto, J

    2014-11-01

    Seed predation has major effects on the reproductive success of individuals, spatial patterns of populations, genetic variability, interspecific interactions and ultimately in the diversity of tree communities. At a Brazilian savanna, I evaluated the proportional crop loss of Eriotheca gracilipes due the Blue-Fronted Amazon (Amazona aestiva) during a fruiting period. Also, I analyzed the relationship between proportional crop loss to Amazons and both fruit crop size and the distance from the nearest damaged conspecific. Trees produced from 1 to 109 fruits, so that Amazons foraged more often on trees bearing larger fruit crop size, while seldom visited less productive trees. Moreover, the relationship between fruit crop sizes and the number of depredated fruits was significant. However, when only damaged trees were assessed, I found a negative and significant relation between fruit crop size and proportional crop loss to Blue-Fronted Amazons. Taking into account this as a measure more directly related to the probability of seed survival, a negative density dependent effect emerged. Also, Amazons similarly damaged the fruit crops of either close or distant neighboring damaged trees. Hence, in spite of Blue-Fronted Amazons searched for E. gracilipes bearing large fruit crops, they were swamped due to the presence of more fruits than they could eat. Moderate seed predation by Blue-Fronted Amazons either at trees with large fruit crops or in areas where fruiting trees were aggregated implies in an enhanced probability of E. gracilipes seed survival and consequent regeneration success.

  14. Food consumption and dietary adequacy according to income in 1,200 families, Manaus, Amazonas, Brazil, 1973-1974.

    PubMed

    Shrimpton, R

    1984-12-01

    Data from a household expenditure survey of 1,200 Manaus families performed by the Amazonas State Government in 1973-74 are analyzed by income group. The per cent frequency of families buying different foods and the daily per capita consumption of each were calculated. The daily per capita intakes of energy, protein, vitamin A, thiamine, riboflavin, nicotinic acid, ascorbic acid, calcium, phosphorus, iron and zinc were estimated and their adequacy evaluated. In contrast to the south and northeast of Brazil, the main bulk of the diet was derived from cereals and fish. The quantities of eggs, meats, fruit and vegetables consumed per person, increased 50-100% as income improved, whereas fish consumption decreased 30%. The nutrients quantitatively most deficient were zinc, vitamin A, calcium, thiamine and riboflavin, with 60-80% of low and middle income families not achieving safe levels of intake for zinc and vitamin A. The beneficial effect of income on the adequacy of calcium, thiamine and riboflavin intake was quantitative. For zinc and vitamin A, increased income was associated with a qualitative improvement in the diet, principally due to the increased consumption of meat and liver. These results are discussed in relation to existing clinical evidence of deficiency states in the region.

  15. Antinociceptive effects of long-acting nalbuphine decanoate after intramuscular administration to Hispaniolan Amazon parrots (Amazona ventralis).

    PubMed

    Sanchez-Migallon Guzman, David; Braun, Jana M; Steagall, Paulo V M; Keuler, Nicholas S; Heath, Timothy D; Krugner-Higby, Lisa A; Brown, Carolyn S; Paul-Murphy, Joanne R

    2013-02-01

    To evaluate the thermal antinociceptive effects and duration of action of nalbuphine decanoate after IM administration to Hispaniolan Amazon parrots (Amazona ventralis). 10 healthy adult Hispaniolan Amazon parrots of unknown sex. Nalbuphine decanoate (33.7 mg/kg) or saline (0.9% NaCl) solution was administered IM in a randomized complete crossover experimental design (periods 1 and 2). Foot withdrawal threshold to a noxious thermal stimulus was used to evaluate responses. Baseline thermal withdrawal threshold was recorded 1 hour before drug or saline solution administration, and thermal foot withdrawal threshold measurements were repeated 1, 2, 3, 6, 12, 24, 48, and 72 hours after drug administration. Nalbuphine decanoate administered IM at a dose of 33.7 mg/kg significantly increased thermal foot withdrawal threshold, compared with results after administration of saline solution during period 2, and also caused a significant change in withdrawal threshold for up to 12 hours, compared with baseline values. Nalbuphine decanoate increased the foot withdrawal threshold to a noxious thermal stimulus in Hispaniolan Amazon parrots for up to 12 hours and provided a longer duration of action than has been reported for other nalbuphine formulations. Further studies with other types of nociceptive stimulation, dosages, and dosing intervals as well as clinical trials are needed to fully evaluate the analgesic effects of nalbuphine decanoate in psittacine birds.

  16. Survey of pathogens in threatened wild red-tailed Amazon parrot (Amazona brasiliensis) nestlings in Rasa Island, Brazil.

    PubMed

    Vaz, Frederico Fontanelli; Serafini, Patrícia Pereira; Locatelli-Dittrich, Rosangela; Meurer, Rafael; Durigon, Edison Luiz; de Araújo, Jansen; Thomazelli, Luciano Matsumiya; Ometto, Tatiana; Sipinski, Elenise Angelotti Bastos; Sezerban, Rafael Meirelles; Abbud, Maria Cecília; Raso, Tânia Freitas

    The red-tailed Amazon parrot (Amazona brasiliensis) is a threatened species of psittacine bird that inhabit coastal regions of Brazil. In view of the threat of this species, the aim of this study was to perform a health evaluation in wild nestlings in Rasa Island, determining the prevalence of enterobacteria and infectious agents according to type of nest. Blood samples were collected from 64 birds and evaluated for antibodies of Chlamydia psittaci by commercial dot-blot ELISA. Cloacal and oropharyngeal swabs samples were collected from 23 birds from artificial wooden nests, 15 birds from PVC nests and 2 birds from natural nests for microbiological analysis. Swab samples were collected from 58 parrots for C. psittaci detection by PCR and from 50 nestlings for Avian Influenza, Newcastle Disease and West Nile viruses' detection analysis by real-time RT-PCR. Ten bacterial genera and 17 species were identified, and the most prevalent were Escherichia coli and Klebsiella oxytoca. There was no influence of the type of nest in the nestlings' microbiota. All samples tested by ELISA and PCR were negative. There is currently insufficient information available about the health of A. brasiliensis and data of this study provide a reference point for future evaluations and aid in conservation plans. Copyright © 2017 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. All rights reserved.

  17. Screening of Amazonian plants from the Adolpho Ducke forest reserve, Manaus, state of Amazonas, Brazil, for antimicrobial activity.

    PubMed

    Carneiro, Ana Lúcia Basílio; Teixeira, Maria Francisca Simas; Oliveira, Viviana Maria Araújo de; Fernandes, Ormezinda Celeste Cristo; Cauper, Gláucia Socorro de Barros; Pohlit, Adrian Martin

    2008-02-01

    Tropical forests are species-rich reserves for the discovery and development of antimicrobial drugs. The aim of this work is to investigate the in vitro antimicrobial potential of Amazon plants found within the National Institute on Amazon Research's Adolpho Ducke forest reserve, located in Manaus, state of Amazonas, Brazil. 75 methanol, chloroform and water extracts representing 12 plant species were tested for antimicrobial activity towards strains of Mycobacterium smegmatis, Escherichia coli, Streptococcus sanguis, Streptococcus oralis, Staphylococcus aureus and Candida albicans using the gel-diffusion method. Active extracts were further evaluated to establish minimum inhibitory concentrations (MIC) and antimicrobial profiles using bioautography on normal-phase thin-layer chromatography plates. Diclinanona calycina presented extracts with good antimicrobial activity and S. oralis and M. smegmatis were the most sensitive bacteria. D. calycina and Lacmellea gracilis presented extracts with the lowest MIC (48.8 microg/ml). D. calycina methanol and chloroform leaf extracts presented the best overall antimicrobial activity. All test organisms were sensitive to D. calycina branch chloroform extract in the bioautography assay. This is the first evaluation of the biological activity of these plant species and significant in vitro antimicrobial activity was detected in extracts and components from two species, D. calycina and L. gracilis.

  18. Behavioural and hormonal effects of member replacement in captive groups of blue-fronted amazon parrots (Amazona aestiva).

    PubMed

    Silva de Souza Matos, Laerciana; Palme, Rupert; Silva Vasconcellos, Angélica

    2017-03-09

    Social species in captivity may face allostatic overload due to artificial grouping and other social constraints. In rescue centres, groups of psittacines are constantly mixed due to the arrival and/or release of individuals; this procedure is potentially harmful to animal welfare. This study aimed at evaluating the possible impacts of mate replacement on the stress levels of captive blue-fronted amazon parrots (Amazona aestiva). During five weeks, we recorded agonistic interactions and dropping-glucocorticoid metabolites (GCM) concentrations of individuals allocated in a group whose members were kept constant and in a group subjected to frequent member replacement. In both groups, non-linear hierarchies developed, without sex differences regarding aggression or hierarchical positions. The replacement of individuals had no effect on the number of agonistic interactions or on the animals' stress levels. In both groups, higher-ranking individuals had higher stress loads than subordinates. Our study, the first to investigate the social dynamics of A. aestiva, indicated that introducing or removing individuals in captive groups does not seem to affect the welfare of the birds in the short term. This information favours release and reintroduction programs and is relevant for conservation management of this, and possibly other parrot species with similar environmental requirements.

  19. Founded: Genetic Reconstruction of Lineage Diver