Early human use of anadromous salmon in North America at 11,500 y ago

PubMed Central

Halffman, Carrin M.; Potter, Ben A.; McKinney, Holly J.; Finney, Bruce P.; Rodrigues, Antonia T.; Yang, Dongya Y.; Kemp, Brian M.

2015-01-01

Salmon represented a critical resource for prehistoric foragers along the North Pacific Rim, and continue to be economically and culturally important; however, the origins of salmon exploitation remain unresolved. Here we report 11,500-y-old salmon associated with a cooking hearth and human burials from the Upward Sun River Site, near the modern extreme edge of salmon habitat in central Alaska. This represents the earliest known human use of salmon in North America. Ancient DNA analyses establish the species as Oncorhynchus keta (chum salmon), and stable isotope analyses indicate anadromy, suggesting that salmon runs were established by at least the terminal Pleistocene. The early use of this resource has important implications for Paleoindian land use, economy, and expansions into northwest North America. PMID:26392548

The Romans and ritual murder.

PubMed

Schultz, Celia E

2010-01-01

The Roman abhorrence of human sacrifice presented by ancient literary sources stands in contrast to the frequency of rites requiring the death of a human being performed by the Romans during the Republic (509-44 BCE). After examining the ways our sources talk about ritual murder, especially as it was practiced by foreign peoples and subversive or tyrannical elements within Roman society, this discussion turns to the issue of the forms of ritual murder performed by the Romans. Of these various rites, the only one clearly identified by them as human sacrifice, that is, as an offering to the gods of a human life, is the live interment of Gauls and Greeks. Other forms of ritual murder-the burial of unchaste Vestal Virgins and the drowning of hermaphroditic children-were not, in Roman opinion, sacrifice. This distinction made the disposal of Vestal Virgins and hermaphrodites acceptable.

A European Mitochondrial Haplotype Identified in Ancient Phoenician Remains from Carthage, North Africa

PubMed Central

Matisoo-Smith, Elizabeth A.; Gosling, Anna L.; Boocock, James; Kardailsky, Olga; Kurumilian, Yara; Roudesli-Chebbi, Sihem; Badre, Leila; Morel, Jean-Paul; Sebaï, Leïla Ladjimi; Zalloua, Pierre A.

2016-01-01

While Phoenician culture and trade networks had a significant impact on Western civilizations, we know little about the Phoenicians themselves. In 1994, a Punic burial crypt was discovered on Byrsa Hill, near the entry to the National Museum of Carthage in Tunisia. Inside this crypt were the remains of a young man along with a range of burial goods, all dating to the late 6th century BCE. Here we describe the complete mitochondrial genome recovered from the Young Man of Byrsa and identify that he carried a rare European haplogroup, likely linking his maternal ancestry to Phoenician influenced locations somewhere on the North Mediterranean coast, the islands of the Mediterranean or the Iberian Peninsula. This result not only provides the first direct ancient DNA evidence of a Phoenician individual but the earliest evidence of a European mitochondrial haplogroup, U5b2c1, in North Africa. PMID:27224451

New Ancient Egyptian Human Mummies from the Valley of the Kings, Luxor: Anthropological, Radiological, and Egyptological Investigations.

PubMed

Rühli, Frank; Ikram, Salima; Bickel, Susanne

2015-01-01

The Valley of the Kings (arab. Wadi al Muluk; KV) situated on the West Bank near Luxor (Egypt) was the site for royal and elite burials during the New Kingdom (ca. 1500-1100 BC), with many tombs being reused in subsequent periods. In 2009, the scientific project "The University of Basel Kings' Valley Project" was launched. The main purpose of this transdisciplinary project is the clearance and documentation of nonroyal tombs in the surrounding of the tomb of Pharaoh Thutmosis III (ca. 1479-1424 BC; KV 34). This paper reports on newly discovered ancient Egyptian human mummified remains originating from the field seasons 2010-2012. Besides macroscopic assessments, the remains were conventionally X-rayed by a portable X-ray unit in situ inside KV 31. These image data serve as basis for individual sex and age determination and for the study of probable pathologies and embalming techniques. A total of five human individuals have been examined so far and set into an Egyptological context. This project highlights the importance of ongoing excavation and science efforts even in well-studied areas of Egypt such as the Kings' Valley.

New Ancient Egyptian Human Mummies from the Valley of the Kings, Luxor: Anthropological, Radiological, and Egyptological Investigations

PubMed Central

Rühli, Frank; Ikram, Salima

2015-01-01

The Valley of the Kings (arab. Wadi al Muluk; KV) situated on the West Bank near Luxor (Egypt) was the site for royal and elite burials during the New Kingdom (ca. 1500–1100 BC), with many tombs being reused in subsequent periods. In 2009, the scientific project “The University of Basel Kings' Valley Project” was launched. The main purpose of this transdisciplinary project is the clearance and documentation of nonroyal tombs in the surrounding of the tomb of Pharaoh Thutmosis III (ca. 1479–1424 BC; KV 34). This paper reports on newly discovered ancient Egyptian human mummified remains originating from the field seasons 2010–2012. Besides macroscopic assessments, the remains were conventionally X-rayed by a portable X-ray unit in situ inside KV 31. These image data serve as basis for individual sex and age determination and for the study of probable pathologies and embalming techniques. A total of five human individuals have been examined so far and set into an Egyptological context. This project highlights the importance of ongoing excavation and science efforts even in well-studied areas of Egypt such as the Kings' Valley. PMID:26347313

Origins of an Unmarked Georgia Cemetery Using Ancient DNA Analysis.

PubMed

Ozga, Andrew T; Tito, Raúl Y; Kemp, Brian M; Matternes, Hugh; Obregon-Tito, Alexandra; Neal, Leslie; Lewis, Cecil M

2015-04-01

Determining the origins of those buried within undocumented cemeteries is of incredible importance to historical archaeologists and, in many cases, the nearby communities. In the case of Avondale Burial Place, a cemetery in Bibb County, Georgia, in use from 1820 to 1950, all written documentation of those interred within it has been lost. Osteological and archaeological evidence alone could not describe, with confidence, the ancestral origins of the 101 individuals buried there. In the present study, we used ancient DNA extraction methods in well-preserved skeletal fragments from 20 individuals buried in Avondale Burial Place to investigate the origins of the cemetery. Through examination of hypervariable region I (HVR1) in the mitochondrial genome (mtDNA), we determined haplotypes for all 20 of these individuals. Eighteen of these individuals belong to the L or U haplogroups, suggesting that Avondale Burial Place was most likely used primarily as a resting place for African Americans. After the surrounding Bibb County community expressed interest in investigating potential ancestral relationships to those within the cemetery, eight potential descendants provided saliva to obtain mtDNA HVR1 information. Three individuals from Avondale Burial Place matched three individuals with oral history ties to the cemetery. Using the online tool EMPOP, we calculated the likelihood of these exact matches occurring by chance alone (< 1%). The present findings exhibit the importance of genetic analysis of cemetery origins when archaeological and osteological data are inconclusive for estimating ancestry of anonymous historical individuals.

Siberian population of the New Stone Age: mtDNA haplotype diversity in the ancient population from the Ust'-Ida I burial ground, dated 4020-3210 BC by 14C.

PubMed

Naumova O, Y u; Rychkov S, Y u

1998-03-01

On the basis of analysis of mtDNA from skeletal remains, dated by 14C 4020-3210 BC, from the Ust'-Ida I Neolithic burial ground in Cis-Baikal area of Siberia, we obtained genetic characteristics of the ancient Mongoloid population. Using the 7 restriction enzymes for the analysis of site's polymorphism in 16,106-16,545 region of mtDNA, we studied the structure of the most frequent DNA haplotypes, and estimated the intrapopulational nucleotide diversity of the Neolithic population. Comparison of the Neolithic and modern indigeneous populations from Siberia, Mongolia and Ural showed, that the ancient Siberian population is one of the ancestors of the modern population of Siberia. From genetic distance, in the assumption of constant nucleotide substitution rate, we estimated the divergence time between the Neolithic and the modern Siberian population. This divergence time (5572 years ago) is conformed to the age of skeletal remains (5542-5652 years). With use of the 14C dates of the skeletal remains, nucleotide substitution rate in mtDNA was estimated as 1% sequence divergence for 8938-9115 years.

The impact of male burials on the construction of Corded Ware identity: Reconstructing networks of information in the 3rd millennium BC.

PubMed

Bourgeois, Quentin; Kroon, Erik

2017-01-01

The emergence of Corded Ware Groups throughout Europe in the 3rd millennium BC is one of the most defining events in European history. From the Wolga to the Rhine communities start to speak Indo-European languages and bury their dead in an extremely similar fashion. Recent ancient DNA-analyses identify a massive migration from the Eurasian steppe as the prime cause for this event. However, there is a fundamental difference between expressing a Corded Ware identity-the sharing of world views and ideas-and having a specific DNA-profile. Therefore, we argue that investigating the exchange of cultural information on burial rites between these communities serves as a crucial complement to the exchange of biological information. By adopting a practice perspective to 1161 Corded Ware burials throughout north-western Europe, combined with similarity indexes and network representations, we demonstrate a high degree of information sharing on the burial ritual between different regions. Moreover, we show that male burials are much more international in character than female burials and as such can be considered as the vector along which cultural information and Corded Ware identity was transmitted. This finding highlights an underlying complex societal organization of Corded Ware burial rites in which gender roles had a significant impact on the composition and transmission of cultural information. Our findings corroborate recent studies that suggest the Corded Ware was a male focused society.

Videodisks Offer a Detailed Portrait of Qin, the First Chinese Emperor.

ERIC Educational Resources Information Center

Watkins, Beverly T.

1992-01-01

Project Emperor-I has issued two interactive videodiscs on China's first emperor, Qin Shi Huang Di. The videodiscs contain film footage from the archaeological excavation in China, images of artifacts, interviews with Qin specialists, and the full text of articles about the ancient burial site. Development of the videodiscs for scholars involved…

The early days of surgery for stones in the bladder.

PubMed

Ellis, Harold

2011-05-01

Man has suffered from bladder stones since the earliest times. The oldest specimen of a bladder stone so far discovered was obtained at the excavation of a grave of a boy of about 16 in an ancient Egyptian burial ground and was dated at around 4800 BC. Of the triad of 'elective" operations first performed by our surgical forefathers--circumcision, trephination of the skull and cutting for the stone--only the last was for a purely surgical indication and not for religious or ritual reasons; it may safely be pronounced as the most ancient operation performed for a specific surgical pathology.

Using thallium isotopes in the 2.63 Ga Jeerinah Formation from Hamersley Basin, Western Australia, to constrain ancient seafloor oxygenation

NASA Astrophysics Data System (ADS)

Holdaway, B. J.; Owens, J. D.; Nielsen, S.; Anbar, A. D.; Ostrander, C. M.

2017-12-01

Understanding the chemical and biological innovation and evolution of the global ocean is pivotal in understanding the processes for how early life on Earth and potentially habitable planets advanced. Previous research on early-Earth oxygenation has revealed a rise in atmospheric [O2] 2.32 billion years ago, coined the Great Oxidation Event, or GOE. Many lines of evidence, however, suggest continental oxidative weathering as early as 3.0 Ga, with possibilities of complementary ocean oxygenation. Modeling of the geochemical data suggests small oxygen "oases" prior to whiffs of O2, or even widespread oxygen-rich margins. However, constraining the extent and timing of oceanic oxygenation is difficult as proxies fall short in detecting early ocean oxygenation. Importantly, the formation and preservation of manganese (Mn) in the form of manganese-oxides requires an oxygenated water-column that penetrates the sediment-water interface. Until recently, tracking the global burial of Mn-oxides was very difficult, largely compounded by an incomplete ancient geologic record. Here we use thallium (Tl), a new and novel isotope system to better constrain marine [O2], specifically by constraining the global burial of Mn-oxides. Recently, it has been shown that modern seawater Tl isotope composition is faithfully recorded in anoxic to euxinic (anoxic and sulfidic) sediments. Nearly all isotopic inputs: riverine, dust, volcanic, hydrothermal, and benthic recycling of Tl into the ocean are constant with ɛ205Tl -2. In contrast, the two primary outputs impart significant fractionations, these outputs being the burial of Mn-oxides (ɛ205Tl +12) and altered oceanic crust (ɛ205Tl -10). Thus, seawater is mainly dictated by the mass balance of the outputs (Mn-oxides and altered oceanic crust) which, for short-term events, is likely driven by the amount of Mn-oxide burial. Tl isotope analyses of the dominantly euxinic 2.5 Ga Mt. McRae Shale from the Hamersley Basin, Western Australia, suggest oceanic oxygenation penetrated minor expanses of the global sediment-water interface, coeval with a "whiff" of O2 at 2.5 Ga. Here we probe deeper into the ancient rock record prior to the "whiff", applying high resolution Tl isotope measurements to the anoxic and euxinic 2.63 Ga Roy Hill Shale.

Evidence for Patterns of Selective Urban Migration in the Greater Indus Valley (2600-1900 BC): A Lead and Strontium Isotope Mortuary Analysis

PubMed Central

Valentine, Benjamin; Kamenov, George D.; Kenoyer, Jonathan Mark; Shinde, Vasant; Mushrif-Tripathy, Veena; Otarola-Castillo, Erik; Krigbaum, John

2015-01-01

Just as modern nation-states struggle to manage the cultural and economic impacts of migration, ancient civilizations dealt with similar external pressures and set policies to regulate people’s movements. In one of the earliest urban societies, the Indus Civilization, mechanisms linking city populations to hinterland groups remain enigmatic in the absence of written documents. However, isotopic data from human tooth enamel associated with Harappa Phase (2600-1900 BC) cemetery burials at Harappa (Pakistan) and Farmana (India) provide individual biogeochemical life histories of migration. Strontium and lead isotope ratios allow us to reinterpret the Indus tradition of cemetery inhumation as part of a specific and highly regulated institution of migration. Intra-individual isotopic shifts are consistent with immigration from resource-rich hinterlands during childhood. Furthermore, mortuary populations formed over hundreds of years and composed almost entirely of first-generation immigrants suggest that inhumation was the final step in a process linking certain urban Indus communities to diverse hinterland groups. Additional multi disciplinary analyses are warranted to confirm inferred patterns of Indus mobility, but the available isotopic data suggest that efforts to classify and regulate human movement in the ancient Indus region likely helped structure socioeconomic integration across an ethnically diverse landscape. PMID:25923705

Evidence for Patterns of Selective Urban Migration in the Greater Indus Valley (2600-1900 BC): A Lead and Strontium Isotope Mortuary Analysis.

PubMed

Valentine, Benjamin; Kamenov, George D; Kenoyer, Jonathan Mark; Shinde, Vasant; Mushrif-Tripathy, Veena; Otarola-Castillo, Erik; Krigbaum, John

2015-01-01

Just as modern nation-states struggle to manage the cultural and economic impacts of migration, ancient civilizations dealt with similar external pressures and set policies to regulate people's movements. In one of the earliest urban societies, the Indus Civilization, mechanisms linking city populations to hinterland groups remain enigmatic in the absence of written documents. However, isotopic data from human tooth enamel associated with Harappa Phase (2600-1900 BC) cemetery burials at Harappa (Pakistan) and Farmana (India) provide individual biogeochemical life histories of migration. Strontium and lead isotope ratios allow us to reinterpret the Indus tradition of cemetery inhumation as part of a specific and highly regulated institution of migration. Intra-individual isotopic shifts are consistent with immigration from resource-rich hinterlands during childhood. Furthermore, mortuary populations formed over hundreds of years and composed almost entirely of first-generation immigrants suggest that inhumation was the final step in a process linking certain urban Indus communities to diverse hinterland groups. Additional multi disciplinary analyses are warranted to confirm inferred patterns of Indus mobility, but the available isotopic data suggest that efforts to classify and regulate human movement in the ancient Indus region likely helped structure socioeconomic integration across an ethnically diverse landscape.

Anthropological and palaeopathological analysis of the human remains from three "Tombs of the Nobles" of the necropolis of Thebes-west, upper Egypt.

PubMed

Nerlich, A; Zink, A; Hagedorn, H G; Szeimies, U; Weyss, C

2000-12-01

During several recent excavation campaigns at the necropolis of Sheikh-Abd-el-Gurna, Thebes-West, Upper Egypt, we investigated the human remains of three "Tombs of the Nobles" totalling at least 273 individuals. The investigation covered the human material (skeletons and mummy residues) from the tombs TT-84, TT-85 and TT-95. These tombs had been built in the New Kingdom (approx. 1500-1000 B.C.) and used until the Late period (up to 330 BC). All samples were analyzed macroscopically, isolated findings were further investigated by endoscopic and radiological techniques. The at least 273 individuals covered an age range from newborns to senile individuals with a main age of death between 20 and 40 years of age. The rate of infants and subadults was at 20.2% of all individuals and there was a slight male predominance comprising 54.5% of the adults. In this population a fairly high rate of pathological lesions was seen. Thus, dental conditions generally were poor with a high degree of dental abrasion, an also high rate of carious dental lesions (affecting between 13.8% and 27.7% of the yaws) and consequently a significant number of dental abscesses (mean 15.9%). Residues of trauma were observed in a considerable number of individuals ranging between 12.3% and 22.6% depending on the burial place (mean 15.8%). Inflammatory bone reactions (except the dental abscesses) were present to variable extent, in some locations ranging up to 6.8% of the cases (mean 5.1%). In addition, we noted several cases showing cribra orbitalia (mean 29.2%) and porotic hyperostosis (15.4% of cases), mild to severe osteopenia (7.5%) and in several cases subperiosteal new bone formation suggestive of chronic vitamin D-deficiency ("scurvy") (9.5%). The data support the notion of a significant impairment of living conditions in a high number of individuals. The rates of osteoarthrotic joint alterations were considerably variable depending on the burial places (between 1.9% and 18.5%) providing insight into the physical activities of subpopulations in different locations of the burial places. Similarly, the rate of spondylosis showed also variable extent ranging between 12% and 66.1% of vertebral bodies. In general, our analysis provides evidences that the living conditions in the ancient Egyptian population of one of the main necropoles of Thebes analyzed in this study were quite poor. This is somewhat in contrast to the usually assumed high standard of living of the socially higher population of the capital of ancient Egypt.

Different Types of Peptide Detected by Mass Spectrometry among Fresh Silk and Archaeological Silk Remains for Distinguishing Modern Contamination

PubMed Central

Li, Li; Gong, Yuxuan; Yin, Hao; Gong, Decai

2015-01-01

Archaeological silk provides abundant information for studying ancient technologies and cultures. However, due to the spontaneous degradation and the damages from burial conditions, most ancient silk fibers which suffered the damages for thousands of years were turned into invisible molecular residues. For the obtained rare samples, extra care needs to be taken to accurately identify the genuine archaeological silk remains from modern contaminations. Although mass spectrometry (MS) is a powerful tool for identifying and analyzing the ancient protein residues, the traditional approach could not directly determine the dating and contamination of each sample. In this paper, a series of samples with a broad range of ages were tested by MS to find an effective and innovative approach to determine whether modern contamination exists, in order to verify the authenticity and reliability of the ancient samples. The new findings highlighted that the detected peptide types of the fibroin light chain can indicate the degradation levels of silk samples and help to distinguish contamination from ancient silk remains. PMID:26186676

Queen Nefertari, the Royal Spouse of Pharaoh Ramses II: A Multidisciplinary Investigation of the Mummified Remains Found in Her Tomb (QV66)

PubMed Central

Habicht, Michael E.; Bianucci, Raffaella; Buckley, Stephen A.; Fletcher, Joann; Bouwman, Abigail S.; Öhrström, Lena M.; Seiler, Roger; Galassi, Francesco M.; Hajdas, Irka; Vassilika, Eleni; Böni, Thomas; Henneberg, Maciej; Rühli, Frank J.

2016-01-01

Queen Nefertari, the favourite Royal Consort of Pharaoh Ramses II (Ancient Egypt, New Kingdom, 19th Dynasty c. 1250 BC) is famous for her beautifully decorated tomb in the Valley of the Queens. Her burial was plundered in ancient times yet still many objects were found broken in the debris when the tomb was excavated. Amongst the found objects was a pair of mummified legs. They came to the Egyptian Museum in Turin and are henceforth regarded as the remains of this famous Queen, although they were never scientifically investigated. The following multidisciplinary investigation is the first ever performed on those remains. The results (radiocarbon dating, anthropology, paleopathology, genetics, chemistry and Egyptology) all strongly speak in favour of an identification of the remains as Nefertari’s, although different explanations—albeit less likely—are considered and discussed. The legs probably belong to a lady, a fully adult individual, of about 40 years of age. The materials used for embalming are consistent with Ramesside mummification traditions and indeed all objects within the tomb robustly support the burial as of Queen Nefertari. PMID:27902731

DNA analysis of ancient dogs of the Americas: identifying possible founding haplotypes and reconstructing population histories.

PubMed

Witt, Kelsey E; Judd, Kathleen; Kitchen, Andrew; Grier, Colin; Kohler, Timothy A; Ortman, Scott G; Kemp, Brian M; Malhi, Ripan S

2015-02-01

As dogs have traveled with humans to every continent, they can potentially serve as an excellent proxy when studying human migration history. Past genetic studies into the origins of Native American dogs have used portions of the hypervariable region (HVR) of mitochondrial DNA (mtDNA) to indicate that prior to European contact the dogs of Native Americans originated in Eurasia. In this study, we summarize past DNA studies of both humans and dogs to discuss their population histories in the Americas. We then sequenced a portion of the mtDNA HVR of 42 pre-Columbian dogs from three sites located in Illinois, coastal British Columbia, and Colorado, and identify four novel dog mtDNA haplotypes. Next, we analyzed a dataset comprised of all available ancient dog sequences from the Americas to infer the pre-Columbian population history of dogs in the Americas. Interestingly, we found low levels of genetic diversity for some populations consistent with the possibility of deliberate breeding practices. Furthermore, we identified multiple putative founding haplotypes in addition to dog haplotypes that closely resemble those of wolves, suggesting admixture with North American wolves or perhaps a second domestication of canids in the Americas. Notably, initial effective population size estimates suggest at least 1000 female dogs likely existed in the Americas at the time of the first known canid burial, and that population size increased gradually over time before stabilizing roughly 1200 years before present. Copyright © 2014 Elsevier Ltd. All rights reserved.

Micro-chemical and metallurgical study of Samnite bronze belts from ancient Abruzzo (central Italy, VIII-IV BC)

NASA Astrophysics Data System (ADS)

Riccucci, Cristina; Ingo, Gabriel Maria; Faustoferri, Amalia; Pierigè, Maria Isabella; Parisi, Erica Isabella; Di Carlo, Gabriella; De Caro, Tilde; Faraldi, Federica

2013-12-01

The Samnite bronze belts and the chest disk cuirasses (VIII-IV BC) are the distinctive defensive weapons of the Samnite warriors having likely also a symbolic relevance. These artefacts were mainly found during the archaeological excavations of warriors' graves from ancient Abruzzo (central Italy). Their chemical composition, metallurgical features and corrosion products formed during the long-term burial have been studied by means of the combined use of analytical techniques such as optical microscopy (OM), scanning electron microscopy coupled with energy-dispersive X-ray micro-analysis (SEM-EDS), X-ray photoelectron spectroscopy (XPS) and X-ray diffraction (XRD). The micro-chemical and structural results show that the bronze belts have often been produced by using unusual high-tin bronze alloys achieving a silver-like appearance and by performing tailored cycles of thermal treatments under reducing conditions and hot mechanical working aimed to shape the high-tin alloys in the form of a thin bronze sheet. Furthermore, the investigation has shown that the main alloying elements have been transformed during the burial into mineral species giving rise to the formation of stratified structures constituted by different mineral phases such as tin oxides, cuprous oxide (Cu2O) and copper carbonates (azurite (Cu3(CO3)2(OH)2 and malachite (CuCO3Cu(OH)2)) as well as dangerous chlorine-based compounds such as nantokite (CuCl) and atacamite (Cu2(OH)3Cl) polymorphs. This information evidences the strict interaction of the alloying elements with the soil components as well as the occurrence of the copper cyclic corrosion as a post-burial degradation phenomenon. The present study confirms that the combined micro-chemical and micro-structural investigation techniques such as SEM-EDS, XPS, XRD and OM can be successfully used to investigate the technological production processes of the ancient artefacts and to achieve the detailed micro-chemical and structural description of the corrosion products useful for the identification of degradation agents and mechanisms and, thereafter, to propose a reliable tailored strategy for the conservation.

Environmental Microbial Forensics and Archaeology of Past Pandemics.

PubMed

Fornaciari, Antonio

2017-01-01

The development of paleomicrobiology with new molecular techniques such as metagenomics is revolutionizing our knowledge of microbial evolution in human history. The study of microbial agents that are concomitantly active in the same biological environment makes it possible to obtain a picture of the complex interrelations among the different pathogens and gives us the perspective to understand the microecosystem of ancient times. This research acts as a bridge between disciplines such as archaeology, biology, and medicine, and the development of paleomicrobiology forces archaeology to broaden and update its methods. This chapter addresses the archaeological issues related to the identification of cemeteries from epidemic catastrophes (typology of burials, stratigraphy, topography, paleodemography) and the issues related to the sampling of human remains for biomolecular analysis. Developments in the field of paleomicrobiology are described with the example of the plague. Because of its powerful interdisciplinary features, the paleomicrobiological study of Yersinia pestis is an extremely interesting field, in which paleomicrobiology, historical research, and archeology are closely related, and it has important implications for the current dynamics of epidemiology.

Identification of kinship and occupant status in Mongolian noble burials of the Yuan Dynasty through a multidisciplinary approach

PubMed Central

Cui, Yinqiu; Song, Li; Wei, Dong; Pang, Yuhong; Wang, Ning; Ning, Chao; Li, Chunmei; Feng, Binxiao; Tang, Wentao; Li, Hongjie; Ren, Yashan; Zhang, Chunchang; Huang, Yanyi; Hu, Yaowu; Zhou, Hui

2015-01-01

The Yuan Dynasty (AD 1271–1368) was the first dynasty in Chinese history where a minority ethnic group (Mongols) ruled. Few cemeteries containing Mongolian nobles have been found owing to their tradition of keeping burial grounds secret and their lack of historical records. Archaeological excavations at the Shuzhuanglou site in the Hebei province of China led to the discovery of 13 skeletons in six separate tombs. The style of the artefacts and burials indicate the cemetery occupants were Mongol nobles. However, the origin, relationships and status of the chief occupant (M1m) are unclear. To shed light on the identity of the principal occupant and resolve the kin relationships between individuals, a multidisciplinary approach was adopted, combining archaeological information, stable isotope data and molecular genetic data. Analysis of autosomal, mitochondrial and Y-chromosomal DNA show that some of the occupants were related. The available evidence strongly suggests that the principal occupant may have been the Mongol noble Korguz. Our study demonstrates the power of a multidisciplinary approach in elucidating information about the inhabitants of ancient historical sites. PMID:25487330

A Greek perspective on concepts of death and expression of grief, with implications for practice.

PubMed

Mystakidou, Kyriaki; Tsilika, Eleni; Parpa, Efi; Katsouda, Emmanuela; Vlahos, Lambros

2003-12-01

Death has been conceptualised in different ways by different cultures and civilizations. It is increasingly entering into the public consciousness and society is now more ready to discuss and lessen the fear of dying and grief than it has been in the past few decades. In Greece, by Classical times there was an increase in burial rituals and commemorative practices compared to earlier periods. When Christianity was introduced into Greece it attempted to change the way the dead were mourned, preaching immortality of the soul and resurrection of the dead. Nevertheless, the way people grieve and bury their dead in Greece has not changed greatly since before the introduction of Christianity, except for the difficulty experienced in witnessing burial procedures observed in the large cities. Burial and bereavement traditions were introduced to help Greeks cope with death and bereavement. In Greece today beliefs about grief and death are based both on the ancient and the Christian Orthodox traditions. Healthcare professionals need to develop cultural competence to improve nursing and future health care. If care is culturally informed and tailored its quality is improved.

Micromorphology of two prehistoric ritual burials from Yemen, and considerations on methodological aspects of sampling the burial matrix - work in progress

NASA Astrophysics Data System (ADS)

Usai, Maria-Raimonda; Brothwell, Don; Buckley, Stephen; Ai-Thour, Kalid; Canti, Matthew

2010-05-01

Introduction In the central area of Yemen, two burial sites placed high in the crevices of vertical cliff face of Cretaceous sandstone (Tawilah Group) provided evidence of human remains and yielded burial soils. Radiocarbon dating indicated c.2500-2900 years BP for the burials. In other local comparable sites the deep horizontal crevices yielded Bronze Age human remains, in exceptional state of preservation Questions: What was the nature of the burial matrix? Are other human influences superimposed on the soils derived from it? Is it simply decomposed crevice rock, scraped together at the time of burial, or the result of a more complex burial practice? Such questions are also relevant to a variety of other burials of different periods and world regions. Methods Seven matrix samples from Cliff Burials (A) Talan (Layers 4,10,12,14,18,20 and 22, from top to bottom) and (B) Shiban Kawkaban (Layer 1 and 9) were analysed with micromorphology, supplemented by SEM microprobe, X-ray diffraction, gas chromatography/mass spectrometry. Results Cliff Burial Site Talan. The presence of cholesterol was confirmed in the lower sample. The second layer contained darker earth with fibrous plant material. A hard calcareous upper capping contrasted with the other levels of matrix, and it displayed a highly birefingent material with a significant component of uric acid. The other levels had variable organic content and plant inclusions, and possibly pollen. In Layer 10, aromatic acids indicative of balsam and sugar markers suggested plant gum. Cholesterol was the major sterol in Layers 10 and 22, but whilst in Layer 10 its oxidation products were present and cholestanol was abundant as normally in soils, it was only a minor component of Layer 22 where, rather, a significant amount of coprostanol indicated faecal input, and cholesterol oxidation products were absent. Cliff Burial Site Shiban Kawkaban. Although no stratification was visible to the naked eye, variation was observed at a micromorphological level. Layer 1 included mineral, bone, plant and soil-like fragments, with leaf and woody tissue, including vascular parts and seeds. Layer 9 included plant tissue, hair, seeds and some fly puparia. Comments Layering of the burial matrix in the Yemeni burials was unexpected and the burial matrix in one case was very clearly not the result of natural soil forming processes within the rock crevice. In Burial Site A the hard upper capping contained uric acid-rich deposits embedding organic tissue. This sample could possibly represent an intentional ‘plaster layer' including plant, hair and seed fragments. The abundant cholesterol confirms an animal/human origin within the matrix of Layers 10 and 22, and the stanol and bile acid distributions unequivocally confirm a human origin, despite the lack of any physical human remains. Microprobe analysis indicated that the hard cup of Burial 1 contained K, Si, Al, Cu, Mg, S, Fe and Na with amounts fluctuating relatively to depth. No special significance can be placed on the differences. This study calls attention to a neglected aspect of burial archaeology: grave infillings can no longer be assumed to be simply the return of material removed for the burial, but may be influenced by other factors. Through micromorphology, decomposed wood, shroud or other textiles or skins and hair can be detected and, if local rituals influenced the way materials were returned into the grave, then this also deserves investigation. A new ERC-funded project (Title: "Interred with their bones", acronym: "InterArChive") tackles these issues (please see separate poster). Acknowledgments We thank Allan Hall, Brendan Keely, Trevor Dransfield, Andrea Vacca and Cagliari University

Investigation of ancient DNA from Western Siberia and the Sargat culture.

PubMed

Bennett, Casey C; Kaestle, Frederika A

2010-04-01

Mitochondrial DNA from 14 archaeological samples at the Ural State University in Yekaterinburg, Russia, was extracted to test the feasibility of ancient DNA work on their collection. These samples come from a number of sites that fall into two groupings. Seven samples are from three sites, dating to the 8th-12th century AD, that belong to a northern group of what are thought to be Ugrians, who lived along the Ural Mountains in northwestern Siberia. The remaining seven samples are from two sites that belong to a southern group representing the Sargat culture, dating between roughly the 5th century BC and the 5th century AD, from southwestern Siberia near the Ural Mountains and the present-day Kazakhstan border. The samples are derived from several burial types, including kurgan burials. They also represent a number of different skeletal elements and a range of observed preservation. The northern sites repeatedly failed to amplify after multiple extraction and amplification attempts, but the samples from the southern sites were successfully extracted and amplified. The sequences obtained from the southern sites support the hypothesis that the Sargat culture was a potential zone of intermixture between native Ugrian and/or Siberian populations and steppe peoples from the south, possibly early Iranian or Indo-Iranian, which has been previously suggested by archaeological analysis.

Fossil Microorganisms in Archaean

NASA Technical Reports Server (NTRS)

Astafleva, Marina; Hoover, Richard; Rozanov, Alexei; Vrevskiy, A.

2006-01-01

Ancient Archean and Proterozoic rocks are the model objects for investigation of rocks comprising astromaterials. The first of Archean fossil microorganisms from Baltic shield have been reported at the last SPIE Conference in 2005. Since this confeence biomorphic structures have been revealed in Archean rocks of Karelia. It was determined that there are 3 types of such bion structures: 1. structures found in situ, in other words microorganisms even-aged with rock matrix, that is real Archean fossils biomorphic structures, that is to say forms inhabited early formed rocks, and 3. younger than Archean-Protherozoic minerali microorganisms, that is later contamination. We made attempt to differentiate these 3 types of findings and tried to understand of burial of microorganisms. The structures belongs (from our point of view) to the first type, or real Archean, forms were under examination. Practical investigation of ancient microorganisms from Green-Stone-Belt of Northern Karelia turns to be very perspective. It shows that even in such ancient time as Archean ancient diverse world existed. Moreover probably such relatively highly organized cyanobacteria and perhaps eukaryotic formes existed in Archean world.

16 CFR 453.1 - Definitions.

Code of Federal Regulations, 2012 CFR

2012-01-01

... deceased human bodies for burial, cremation or other final disposition; and (2) arrange, supervise or conduct the funeral ceremony or the final disposition of deceased human bodies. (k) Immediate burial. An... enclosure, without ornamentation or a fixed interior lining, which is designed for the encasement of human...

16 CFR 453.1 - Definitions.

Code of Federal Regulations, 2013 CFR

2013-01-01

... deceased human bodies for burial, cremation or other final disposition; and (2) arrange, supervise or conduct the funeral ceremony or the final disposition of deceased human bodies. (k) Immediate burial. An... enclosure, without ornamentation or a fixed interior lining, which is designed for the encasement of human...

16 CFR 453.1 - Definitions.

Code of Federal Regulations, 2014 CFR

2014-01-01

... deceased human bodies for burial, cremation or other final disposition; and (2) arrange, supervise or conduct the funeral ceremony or the final disposition of deceased human bodies. (k) Immediate burial. An... enclosure, without ornamentation or a fixed interior lining, which is designed for the encasement of human...

ACHP | News

Science.gov Websites

of Burial Sites, Human Remains, and Funerary Objects The Advisory Council on Historic Preservation voted unanimously to adopt its new "Policy Statement Regarding Treatment of Burial Sites, Human Human Remains and Grave Goods." As part of its outreach effort, the ACHP's Archaeology Task Force

16 CFR 453.1 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... deceased human bodies for burial, cremation or other final disposition; and (2) arrange, supervise or conduct the funeral ceremony or the final disposition of deceased human bodies. (k) Immediate burial. An... enclosure, without ornamentation or a fixed interior lining, which is designed for the encasement of human...

16 CFR 453.1 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... deceased human bodies for burial, cremation or other final disposition; and (2) arrange, supervise or conduct the funeral ceremony or the final disposition of deceased human bodies. (k) Immediate burial. An... enclosure, without ornamentation or a fixed interior lining, which is designed for the encasement of human...

Morphologic-anthropological investigations in tomb K93.12 at Dra' Abu el-Naga (Western Thebes, Egypt).

PubMed

Lösch, Sandra; Moghaddam, Negahnaz; Paladin, Alice; Rummel, Ute; Hower-Tilmann, Estelle; Zink, Albert

2014-01-01

In this study we present the analysis of the human remains from tomb K93.12 in the Ancient Egyptian necropolis of Dra' Abu el-Naga, located opposite the modern city of Luxor in Upper Egypt on the western bank of the Nile. Archaeological findings indicate that the rock tomb was originally built in the early 18th dynasty. Remains of two tomb-temples of the 20th dynasty and the looted burial of the High Priest of Amun Amenhotep have been identified. After the New Kingdom the tomb was reused as a burial place until the 26th dynasty. The skeletal and mummified material of the different tomb areas underwent a detailed anthropological and paleopathological analysis. The human remains were mostly damaged and scattered due to extensive grave robberies. In total, 79 individuals could be partly reconstructed and investigated. The age and sex distribution revealed a male predominance and a high percentage of young children (< 6 years) and adults in the range of 20 to 40 years. The paleopathological analysis showed a high prevalence of stress markers such as cribra orbitalia in the younger individuals, and other pathological conditions such as dental diseases, degenerative diseases and a possible case of ankylosing spondylitis. Additionally, 13 mummies of an intrusive waste pit could be attributed to three different groups belonging to earlier time periods based on their style of mummification and materials used. The study revealed important information on the age and sex distribution and diseases of the individuals buried in tomb K93.12.

Preliminary results of sequential monitoring of simulated clandestine graves in Colombia, South America, using ground penetrating radar and botany.

PubMed

Molina, Carlos Martin; Pringle, Jamie K; Saumett, Miguel; Hernández, Orlando

2015-03-01

In most Latin American countries there are significant numbers of missing people and forced disappearances, 68,000 alone currently in Colombia. Successful detection of shallow buried human remains by forensic search teams is difficult in varying terrain and climates. This research has created three simulated clandestine burial styles at two different depths commonly encountered in Latin America to gain knowledge of optimum forensic geophysics detection techniques. Repeated monitoring of the graves post-burial was undertaken by ground penetrating radar. Radar survey 2D profile results show reasonable detection of ½ clothed pig cadavers up to 19 weeks of burial, with decreasing confidence after this time. Simulated burials using skeletonized human remains were not able to be imaged after 19 weeks of burial, with beheaded and burnt human remains not being able to be detected throughout the survey period. Horizontal radar time slices showed good early results up to 19 weeks of burial as more area was covered and bi-directional surveys were collected, but these decreased in amplitude over time. Deeper burials were all harder to image than shallower ones. Analysis of excavated soil found soil moisture content almost double compared to those reported from temperate climate studies. Vegetation variations over the simulated graves were also noted which would provide promising indicators for grave detection. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Analysis of medieval mtDNA from Napole cemetery provides new insights into the early history of Polish state.

PubMed

Płoszaj, Tomasz; Jędrychowska-Dańska, Krystyna; Masłowska, Alicja; Kozłowski, Tomasz; Chudziak, Wojciech; Bojarski, Jacek; Robaszkiewicz, Agnieszka; Witas, Henryk W

2017-02-01

Contemporary historical anthropology and classical archaeology are concerned not only with such fundamental issues as the origins of ancient human populations and migration routes, but also with the formation and development of inter-population relations and the mixing of gene pools as a result of inter-breeding between individuals representing different cultural units. The contribution of immigrants to the analysed autochthonous population and their effect on the gene pool of that population has proven difficult to evaluate with classical morphological methods. The burial of one individual in the studied Napole cemetery located in central Poland had the form of a chamber grave, which is typical of Scandinavian culture from that period. However, this fact cannot be interpreted as absolute proof that the individual (in the biological sense) was allochtonous. This gives rise to the question as to who was actually buried in that cemetery. The ancient DNA results indicate that one of the individuals had an mtDNA haplotype typical of Iron Age northern Europe, which suggests that he could have arrived from that area at a later period. This seems to indirectly confirm the claims of many anthropologists that the development of the early medieval Polish state was significantly and directly influenced by the Scandinavians.

Sedimentary Carbon, Sulfur, and Iron Relationships in Modern and Ancient Diagenetic Environments of the Eel River Basin (U.S.A.)

USGS Publications Warehouse

Sommerfield, C.K.; Aller, R.C.; Nittrouer, C.A.

2001-01-01

Depositional and diagenetic controls on the distributions of carbon, sulfur, and iron (C-S-Fe) in modern sediments and upper Pleistocene mudrocks of the Eel River Basin (ERB), northern California continental margin, were investigated using a combination of geochemical, radioisotopic, and sedimentological methods. A mass balance based on down-core profiles of porewater and solid-phase constituents and diagenetic modeling suggests that only 12-30% of the pyrite-S produced via SO4-2 reduction during burial is retained in modern shelf and upper slope deposits of the ERB. Bioturbational reoxidation of initially reduced S is inferred to be the major control on S preservation, on the basis of an observed inverse relationship between pyrite-S retention and biological mixing intensity, estimated from profiles of excess 234Th. Importantly, these findings argue that massive depositional episodes on the shelf following floods of the Eel River have a negligible long-term impact on bioturbating macrofauna and the potential to affect geochemical properties of the sediments. Down-core profiles of reactive Fe3+and Py-Fe(II) for the modern deposits suggest that highly reactive Fe phases are sulfidized well within ∼ 500-2000 years of burial, thereby limiting later pyritization, which could occur through sulfidation of less reactive phases. This result explains the low (≤ 0.4) degree of pyritization (DOP) values exhibited by both modern and ancient deposits of the ERB and lends support to the notion that pyritization in aerobic continental-margin sediments is largely associated with highly reactive detrital Fe oxides. Comparable mean C/S weight ratios for modern sediments (5.4 ± 3.3, 1σ) and mudrocks (6.9 ± 4.5) of the ERB suggest that the upper Pleistocene strata reflect a geochemical environment analogous to that of the modern margin. Specifically, the C-S-Fe signatures shared by the modern and ancient deposits are a consequence of similar detrital Fe mineralogies, initial organic-matter content (Corg ≤ 1%) and composition (C/N = 13 to 17, δ13Corg = -22 to -25‰), burial rate, and importantly, bioturbation intensity. The findings of this study have important implications for the use of C-S-Fe signatures as indicators of diagenetic processes in dynamic, continental-margin environments.

Molybdenum speciation and burial pathway in weakly sulfidic environments: Insights from XAFS

NASA Astrophysics Data System (ADS)

Wagner, Meghan; Chappaz, Anthony; Lyons, Timothy W.

2017-06-01

Sedimentary molybdenum (Mo) accumulation is a robust proxy for sulfidic conditions in both modern and ancient aquatic systems and has been used to infer changing marine redox chemistry throughout Earth's history. Accurate interpretation of any proxy requires a comprehensive understanding of its biogeochemical cycling, but knowledge gaps remain concerning the geochemical mechanism(s) leading to Mo burial in anoxic sediments. Better characterization of Mo speciation should provide mechanistic insight into sedimentary Mo accumulation, and therefore in this study we investigate Mo speciation from both modern (Castle Lake, USA) and ancient (Doushantuo Formation, China) environments using X-ray Absorption Near Edge Structure (XANES) spectroscopy. By utilizing a series of laboratory-synthesized oxythiomolybdate complexes-many containing organic ligands-we expand the number of available standards to encompass a greater range of known Mo chemistry and test the linkage between Mo and total organic carbon (TOC). In weakly euxinic systems ([H2S(aq)] < 11 μM), or where sulfide is restricted to pore waters, natural samples are best represented by a linear combination of MoO3, MoOxS4-x2- (intermediate thiomolybdates), and [MoOx(cat)4-x]2- (cat = catechol, x = 2 or 3). These results suggest a revised model for how Mo accumulates in weakly sulfidic sediments, including a previously unrecognized role for organic matter in early sequestration of Mo and a de-emphasized importance for MoS42- (tetrathiomolybdate).

Paleogenetical study of pre-Columbian samples from Pampa Grande (Salta, Argentina).

PubMed

Carnese, Fransisco R; Mendisco, Fanny; Keyser, Christine; Dejean, Cristina B; Dugoujon, Jean-Michel; Bravi, Claudio M; Ludes, Bertrand; Crubézy, Eric

2010-03-01

Ancient DNA recovered from 21 individuals excavated from burial sites in the Pampa Grande (PG) region (Salta province) of North-Western Argentina (NWA) was analyzed using various genetic markers (mitochondrial DNA, autosomal STRs, and Y chromosomal STRs). The results were compared to ancient and modern DNA from various populations in the Andean and North Argentinean regions, with the aim of establishing their relationships with PG. The mitochondrial haplogroup frequencies described (11% A, 47% B, and 42% D) presented values comparable to those found for the ancient Andean populations from Peru and San Pedro de Atacama. On the other hand, mitochondrial and Y chromosomal haplotypes were specific to PG, as they did not match any other of the South American populations studied. The described genetic diversity indicates homogeneity in the genetic structure of the ancient Andean populations, which was probably facilitated by the intense exchange network in the Andean zone, in particular among Tiwanaku, San Pedro de Atacama, and NWA. The discovery of haplotypes unique to PG could be due to a loss of genetic diversity caused by recent events affecting the autochthonous populations (establishment of the Inca Empire in the region, colonization by the Europeans).

New Hydroxyproline Radiocarbon Dates from Sungir, Russia, Confirm Early Mid Upper Palaeolithic Burials in Eurasia

PubMed Central

Nalawade-Chavan, Shweta; McCullagh, James; Hedges, Robert

2014-01-01

Sungir (Russia) is a key Mid-Upper Palaeolithic site in Eurasia, containing several spectacular burials that disclose early evidence for complex burial rites in the form of a range of grave goods deposited along with the dead. Dating has been particularly challenging, with multiple radiocarbon dates ranging from 19,160±270 to 28,800±240 BP for burials that are believed to be closely similar in age. There are disparities in the radiocarbon dates of human bones, faunal remains and charcoal found on the floor of burials [1], [2], [3]. Our approach has been to develop compound-specific methods using High Performance Liquid Chromatography (HPLC) to separate single amino acids, such as hydroxyproline, and thereby avoid the known human contamination on the bones themselves. Previously, we applied this technique to obtain radiocarbon dates of ∼30,000 BP for Sungir 2, Sungir 3 and a mammoth bone from the occupation levels of the site [4]. The single amino acid radiocarbon dates were in good agreement with each other compared to all the dates previously reported, supporting their reliability. Here we report new hydroxyproline dates for two more human burials from the same site, Sungir 1 and Sungir 4. All five hydroxyproline dates reported are statistically indistinguishable and support an identical age for the group. The results suggest that compound-specific radiocarbon analysis should be considered seriously as the method of choice when precious archaeological remains are to be dated because they give a demonstrably contaminant-free radiocarbon age. The new ages are, together with the previously dated ‘Red Lady of Paviland’ human in the British Isles, the earliest for Mid Upper Palaeolithic burial behaviour in Eurasia, and point to the precocious appearance of this form of rite in Europe Russia. PMID:24416120

New hydroxyproline radiocarbon dates from Sungir, Russia, confirm early Mid Upper Palaeolithic burials in Eurasia.

PubMed

Nalawade-Chavan, Shweta; McCullagh, James; Hedges, Robert

2014-01-01

Sungir (Russia) is a key Mid-Upper Palaeolithic site in Eurasia, containing several spectacular burials that disclose early evidence for complex burial rites in the form of a range of grave goods deposited along with the dead. Dating has been particularly challenging, with multiple radiocarbon dates ranging from 19,160±270 to 28,800±240 BP for burials that are believed to be closely similar in age. There are disparities in the radiocarbon dates of human bones, faunal remains and charcoal found on the floor of burials. Our approach has been to develop compound-specific methods using High Performance Liquid Chromatography (HPLC) to separate single amino acids, such as hydroxyproline, and thereby avoid the known human contamination on the bones themselves. Previously, we applied this technique to obtain radiocarbon dates of ∼30,000 BP for Sungir 2, Sungir 3 and a mammoth bone from the occupation levels of the site. The single amino acid radiocarbon dates were in good agreement with each other compared to all the dates previously reported, supporting their reliability. Here we report new hydroxyproline dates for two more human burials from the same site, Sungir 1 and Sungir 4. All five hydroxyproline dates reported are statistically indistinguishable and support an identical age for the group. The results suggest that compound-specific radiocarbon analysis should be considered seriously as the method of choice when precious archaeological remains are to be dated because they give a demonstrably contaminant-free radiocarbon age. The new ages are, together with the previously dated 'Red Lady of Paviland' human in the British Isles, the earliest for Mid Upper Palaeolithic burial behaviour in Eurasia, and point to the precocious appearance of this form of rite in Europe Russia.

Clandestine grave detector

DOEpatents

Andrews, Jr., William H.; Thompson, Cyril V [Knoxville, TN; Vass, Arpad A [Oak Ridge, TN; Smith, Rob R [Knoxville, TN

2011-12-13

An apparatus and a method for detecting a burial site of human remains are disclosed. An air stream is drawn through an air intake conduit from locations near potential burial sites of human remains. The air stream is monitored by one or more chemical sensors to determine whether the air stream includes one or more indicator compounds selected from halogenated compounds, hydrocarbons, nitrogen-containing compounds, sulfur-containing compounds, acid/ester compounds, oxygen-containing compounds, and naphthalene-containing compounds. When it is determined that an indicator compound is present in the air stream, this indicates that a burial site of human remains is below or nearby. Each sensor may be in electrical communication with an indicator that signals when the sensor has detected the presence of the indicator compound in the air stream. In one form, the indicator compound is a halogenated compound and/or a hydrocarbon, and the presence of the halogenated compound and/or the hydrocarbon in the air stream indicates that a burial site of human remains is below or nearby.

Impact of diagenesis and low grade metamorphosis on Triassic sabkha dolomite δ26Mg

NASA Astrophysics Data System (ADS)

Immenhauser, A.; Geske, A.; Richter, D.; Buhl, D.; Niedermayr, A.

2012-12-01

Dolomite is a common rock forming mineral in the geological record but its value as archive of ancient seawater δ26Mg signatures and their variations in time are at present underexplored. Unknown factors include the sensitivity of δ26Mg ratio to processes in the diagenetic and low grade metamorphic domain. Here, we document and discusses the first detailed δ26Mg data set from early diagenetic and burial dolomites. Samples come from the Upper Triassic Hauptdolomit (Dolomia Principale; The Dolomites, Italy) and include coeval dolmicrites that underwent differential burial diagenesis in a temperature range between about 100 and more than 350°C. As indicated by dolmicrite 87/86Sr ratios, sabkha calcian D1 dolomites precipitated from evaporated seawater and stabilized at an early diagenetic stage to D2 dolomites analysed here. With increasing burial temperature, dolomite δ26Mg ratio scatter in the data set decreases with increasing Mg/Ca ratio and degree of order. Specifically, δ26Mg ratio variability is reduced from ~0.7‰ at burial temperatures beneath 100°C to about ~0.2‰ at temperatures in excess of 350°C, respectively, with mean δ26Mg values ranging constantly near -1.9‰. This suggests that, at least for the rock buffered system investigated here, dolmicrite δ26Mg proxy data are conservative and preserve near pristine values even at elevated burial temperatures. At present, the main element of uncertainty is the Mg-isotope fractionation factor between (evaporated) seawater and dolomite. A possible solution to this problem includes the compilation of a data from modern sabkha environments including pore water and calcian dolomite δ26Mg isotope signatures.

Assessing global carbon burial during Oceanic Anoxic Event 2, Cenomanian-Turonian boundary event

NASA Astrophysics Data System (ADS)

Owens, J. D.; Lyons, T. W.; Lowery, C. M.

2017-12-01

Reconstructing the areal extent and total amount of organic carbon burial during ancient events remains elusive even for the best documented oceanic anoxic event (OAE) in Earth history, the Cenomanian-Turonian boundary event ( 93.9 Ma), or OAE 2. Reports from 150 OAE 2 localities provide a wide global distribution. However, despite the large number of sections, the majority are found within the proto-Atlantic and Tethyan oceans and interior seaways. Considering these gaps in spatial coverage, the pervasive increase in organic carbon (OC) burial during OAE2 that drove carbon isotope values more positive (average of 4‰) can provide additional insight. These isotope data allow us to estimate the total global burial of OC, even for unstudied portions of the global ocean. Thus, we can solve for any `missing' OC sinks by comparing our estimates from a forward carbon-isotope box model with the known, mapped distribution of OC for OAE 2 sediments. Using the known OC distribution and reasonably extrapolating to the surrounding regions of analogous depositional conditions accounts for only 13% of the total seafloor, mostly in marginal marine settings. This small geographic area accounts for more OC burial than the entire modern ocean, but significantly less than the amount necessary to produce the observed isotope record. Using modern and OAE 2 average OC rates we extrapolate further to appropriate depositional settings in the unknown portions of seafloor, mostly deep abyssal plains. This addition significantly increases the predicted amount buried but still does not account for total burial. Additional sources, including hydrocarbon migration, lacustrine, and coal also cannot account for the missing OC. This difference points to unknown portions of the open ocean with high TOC contents or exceptionally high TOC in productive marginal marine regions, which are underestimated in our extrapolations. This difference might be explained by highly productive margins within the Pacific.

Odor analysis of decomposing buried human remains

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vass, Arpad Alexander; Smith, Rob R; Thompson, Cyril V

2008-01-01

This study, conducted at the University of Tennessee's Anthropological Research Facility (ARF), lists and ranks the primary chemical constituents which define the odor of decomposition of human remains as detected at the soil surface of shallow burial sites. Triple sorbent traps were used to collect air samples in the field and revealed eight major classes of chemicals which now contain 478 specific volatile compounds associated with burial decomposition. Samples were analyzed using gas chromatography-mass spectrometry (GC-MS) and were collected below and above the body, and at the soil surface of 1.5-3.5 ft. (0.46-1.07 m) deep burial sites of four individualsmore » over a 4-year time span. New data were incorporated into the previously established Decompositional Odor Analysis (DOA) Database providing identification, chemical trends, and semi-quantitation of chemicals for evaluation. This research identifies the 'odor signatures' unique to the decomposition of buried human remains with projected ramifications on human remains detection canine training procedures and in the development of field portable analytical instruments which can be used to locate human remains in shallow burial sites.« less

Examining the diagenetic alteration of human bone material from a range of archaeological burial sites using nuclear microscopy

NASA Astrophysics Data System (ADS)

Elliott, T. A.; Grime, G. W.

1993-05-01

The inorganic analysis of archaeological bone material can potentially provide a wealth of information about the chronology, diet and palaeoenvironment of past populations: for example, strontium and uranium levels are used in palaeodietary and dating studies, respectively. However, the extent to which the chemical composition of bone is subject to diagenetic change during burial is open to controversy due, in part, to differences in analytical technique, bone types and burial conditions. To investigate this problem, archaeological human bone material from a number of different geological environments including Pompeii and a 12th century British ecclesiastical site, together with material from two seawater burials (The "Mary Rose" and a 6th century Mediterranean wreck) have been studied using the nuclear microprobe facility at the University of Oxford. Results using microbeam PIXE show that bone is subject to contamination from a wide range of trace elements depending on the burial conditions. Elemental maps are presented to demonstrate the distribution of trace element accumulation under different burial conditions, and the significance of this work to future trace element studies is discussed.

Diagenetic pathways in deposits of cool- and cold-water carbonate factories

NASA Astrophysics Data System (ADS)

Frank, T. D.; James, N. P.

2017-12-01

This investigation integrates sedimentological, petrographic, and geochemical observations from modern and ancient heterozoan carbonate deposits that formed at temperate to polar latitudes with the aim of evaluating diagenetic pathways characteristic of these systems. These factories operate under conditions distinct from those of photozoan counterparts. Lower temperatures, higher trophic resources, lower carbonate saturation states, and strong seasonality govern not only the nature of carbonate communities, but also how deposits translate into the rock record. In these settings, carbonate production is entirely biogenic, assemblages are of low diversity, and there are no significant calcareous phototrophs. Aragonitic taxa may be present in living communities, but allochems rapidly disappear via dissolution. Carbonate producers are not capable of building rigid frameworks, so their deposits accumulate as sands and gravels and are prone to winnowing and reworking. Low production rates lead to long seafloor residence times (1000s of years) for grains, which undergo physical reworking, dissolution, and repeated infestation by endolithic borers. Microborings remain empty, increasing grain susceptibility to disintegration. Intergranular cementation on the seafloor is rare and restricted to hardgrounds. Periods of subaerial exposure do not leave traces of meteoric alteration. Results show that the deposits of heterozoan carbonate factories tend enter the geologic record as taphonomic remnants, namely reworked, unconsolidated sands and gravels with low diagenetic potential. During burial, physical and chemical compaction produce limestones with tightly packed, grain-supported fabrics, often with grains in sutured contact. Significant cementation is associated with the deep burial realm. Results reveal a dramatically different diagenetic pathway than is typical for deposits of tropical photozoan factories, in which significant recrystallization and lithification occur on the seafloor and upon subaerial exposure. Interpretations of ancient deposits should take into account the potential for taphonomic loss of aragonitic allochems, modification of depositional textures via reworking and compaction, and grain alteration and cementation focused in the burial environment.

Taenia sp. in human burial from Kan River, East Siberia.

PubMed

Slepchenko, Sergey Mikhailovich; Ivanov, Sergey Nikolaevich; Vybornov, Anton Vasilevich; Alekseevich, Tsybankov Alexander; Sergeyevich, Slavinsky Vyacheslav; Lysenko, Danil Nikolaevich; Matveev, Vyacheslav Evgenievich

2017-05-01

We present an arhaeoparasitological analysis of a unique burial from the Neftprovod II burial ground in East Siberia, which dated from the Bronze Age. Analysis of a sediment sample from the sacral region of the pelvis revealed the presence of Taenia sp. eggs. Because uncooked animal tissue is the primary source of Taenia, this indicated that the individual was likely consuming raw or undercooked meat of roe deer, red deer, or elk infected with Taenia. This finding represents the oldest case of a human infected with Taenia sp. from Eastern Siberia and Russia.

The facial reconstruction of an Ancient Egyptian Queen.

PubMed

Manley, Bill; Eremin, Katherine; Shortland, Andrew; Wilkinson, Caroline

2002-12-01

The National Museums of Scotland Mummy Project has provided important new information about a burial excavated in Egypt. This has resulted in the facial reconstruction of a woman who was probably a queen at Thebes ca. 1570-1520 BCE. There are strong suggestions from the grave goods and her diet that this woman may have been ethnically Nubian rather than Egyptian. However, it is not yet possible to establish her ethnic identity for sure, so a definitive reconstruction of her appearance in life remains elusive.

Burial Duration and Frequency Influences Resilience of Differing Propagule Types in a Subtidal Seagrass, Posidonia australis

PubMed Central

2016-01-01

Sedimentation that leads to periodic, and often prolonged, burial events is becoming more common on the world’s coastlines as human populations expand and create urbanised marine environments. Different seagrass species react differently to sediment burial but many species in the southern hemisphere are yet to be examined. How seagrasses react to burial has restoration implications. There is a need to critically assess seagrass transplant propagule responses to periodic (pulse) and prolonged (press) burial events before selecting the most appropriate species, transplant propagule, and transplant site. In my study, mesocosm experiments, coupled with field measurements were used to assess how sexual (seedlings) and vegetative (sprigs) propagules of Posidonia australis responded to pulse and press burial events. Seedlings were highly susceptible to burial (both pulse and press), with no survival at the end of the experimental period. In contrast, rhizome growth in vegetative propagules was stimulated by pulse burial, although press burial events resulted in mortality. The implication for Posidonia australis restoration efforts in areas where burial is periodic, was that vegetative propagules are optimal transplant units, in comparison to seedlings. Press burial however, renders a transplant site sub-optimal for both seedling and sprig transplants. PMID:27526020

Long-term effects of hydrated lime and quicklime on the decay of human remains using pig cadavers as human body analogues: Field experiments.

PubMed

Schotsmans, Eline M J; Fletcher, Jonathan N; Denton, John; Janaway, Robert C; Wilson, Andrew S

2014-05-01

An increased number of police enquiries involving human remains buried with lime have demonstrated the need for more research into the effect of different types of lime on cadaver decomposition and its micro-environment. This study follows previous studies by the authors who have investigated the effects of lime on the decay of human remains in laboratory conditions and 6 months of field experiments. Six pig carcasses (Sus scrofa), used as human body analogues, were buried without lime with hydrated lime (Ca(OH)2) and quicklime (CaO) in shallow graves in sandy-loam soil in Belgium and recovered after 17 and 42 months of burial. Analysis of the soil, lime and carcasses included entomology, pH, moisture content, microbial activity, histology and lime carbonation. The results of this study demonstrate that despite conflicting evidence in the literature, the extent of decomposition is slowed down by burial with both hydrated lime and quicklime. The more advanced the decay process, the more similar the degree of liquefaction between the limed and unlimed remains. The end result for each mode of burial will ultimately result in skeletonisation. This study has implications for the investigation of clandestine burials, for a better understanding of archaeological plaster burials and potentially for the interpretation of mass graves and management of mass disasters by humanitarian organisation and DVI teams. Copyright © 2014. Published by Elsevier Ireland Ltd.

Good death and bad death in ancient Israel according to biblical lore.

PubMed

Spronk, Klaas

2004-03-01

In the view of the ancient Israelites, as expressed in the Hebrew Bible, death is good or at least acceptable (1) after a long life, (2) when a person dies in peace, (3) when there is continuity in the relation with the ancestors and the heirs, and (4) when one will be buried in one's own land. Death is experienced as bad when (1) it is premature, (2) violent, especially when it is shameful (e.g., when a man is killed by a woman), (3) when a person does not have an heir, and (4) when one does not receive a proper burial. It is remarkable that in the literature of ancient Israel common elements like the cult of the dead and the belief in retribution after death, are not explicitly mentioned and therefore do not function as a comfort for death. Also, from a theological point of view emphasis is placed on this life. A positive attitude towards martyrdom is missing. This results in a way of coping with death which has many 'modern' elements or which may help modern people to face death.

Molybdenum speciation and burial pathway in weakly sulfidic environments: Insights from XAFS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wagner, Meghan; Chappaz, Anthony; Lyons, Timothy W.

Sedimentary molybdenum (Mo) accumulation is a robust proxy for sulfidic conditions in both modern and ancient aquatic systems and has been used to infer changing marine redox chemistry throughout Earth’s history. Accurate interpretation of any proxy requires a comprehensive understanding of its biogeochemical cycling, but knowledge gaps remain concerning the geochemical mechanism(s) leading to Mo burial in anoxic sediments. Better characterization of Mo speciation should provide mechanistic insight into sedimentary Mo accumulation, and therefore in this study we investigate Mo speciation from both modern (Castle Lake, USA) and ancient (Doushantuo Formation, China) environments using X-ray Absorption Near Edge Structure (XANES)more » spectroscopy. By utilizing a series of laboratory-synthesized oxythiomolybdate complexes—many containing organic ligands—we expand the number of available standards to encompass a greater range of known Mo chemistry and test the linkage between Mo and total organic carbon (TOC). In weakly euxinic systems ([H 2S (aq)] < 11 µM), or where sulfide is restricted to pore waters, natural samples are best represented by a linear combination of MoO 3, MoO xS 4-x 2- (intermediate thiomolybdates), and [MoO x(cat) 4-x] 2- (cat = catechol, x = 2 or 3). These results suggest a revised model for how Mo accumulates in weakly sulfidic sediments, including a previously unrecognized role for organic matter in early sequestration of Mo and a de-emphasized importance for MoS 4 2- (tetrathiomolybdate).« less

Molybdenum speciation and burial pathway in weakly sulfidic environments: Insights from XAFS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wagner, Meghan; Chappaz, Anthony; Lyons, Timothy W.

Sedimentary molybdenum (Mo) accumulation is a robust proxy for sulfidic conditions in both modern and ancient aquatic systems and has been used to infer changing marine redox chemistry throughout Earth’s history. Accurate interpretation of any proxy requires a comprehensive understanding of its biogeochemical cycling, but knowledge gaps remain concerning the geochemical mechanism(s) leading to Mo burial in anoxic sediments. Better characterization of Mo speciation should provide mechanistic insight into sedimentary Mo accumulation, and therefore in this study we investigate Mo speciation from both modern (Castle Lake, USA) and ancient (Doushantuo Formation, China) environments using X-ray Absorption Near Edge Structure (XANES)more » spectroscopy. By utilizing a series of laboratory-synthesized oxythiomolybdate complexes—many containing organic ligands—we expand the number of available standards to encompass a greater range of known Mo chemistry and test the linkage between Mo and total organic carbon (TOC). In weakly euxinic systems ([H2S(aq)] < 11 µM), or where sulfide is restricted to pore waters, natural samples are best represented by a linear combination of MoO3, MoOxS4-x2- (intermediate thiomolybdates), and [MoOx(cat)4-x]2- (cat = catechol, x = 2 or 3). These results suggest a revised model for how Mo accumulates in weakly sulfidic sediments, including a previously unrecognized role for organic matter in early sequestration of Mo and a de-emphasized importance for MoS42- (tetrathiomolybdate).« less

A comparative analysis of microscopic alterations in modern and ancient undecalcified and decalcified dry bones.

PubMed

Caruso, Valentina; Cummaudo, Marco; Maderna, Emanuela; Cappella, Annalisa; Caudullo, Giorgio; Scarpulla, Valentina; Cattaneo, Cristina

2018-02-01

The present study aims to evaluate the preservation of the microstructure of skeletal remains collected from four different known burial sites (archaeological and contemporary). Histological analysis on undecalcified and decalcified thin sections was performed in order to assess which of the two techniques is more affected by taphonomic insults. A histological analysis was performed on both undecalcified and decalcified thin sections of 40 long bones and the degree of diagenetic change was evaluated using transmitted and polarized light microscopy according to the Oxford Histological Index (OHI). In order to test the optical behavior of bone tissue, thin sections were observed by polarized light microscopy and the intensity of birefringence was evaluated. The more ancient samples are generally characterized by a low OHI (0-1) with extensive microscopic focal destruction; recent samples exhibited a better preservation of bone micromorphology. When comparing undecalcified to decalcified thin sections, the latter showed an amelioration in the conservation of microscopic structure. As regards the birefringence, it was very low in all the undecalcified thin sections, whereas decalcification process seems to improve its visibility. The preservation of the bone microscopic structure appears to be influenced not only by age, but also by the burial context. Undecalcified bones appear to be more affected by taphonomical alterations, probably because of the thickness of the thin sections; on the contrary, decalcified thin sections proved to be able to tackle this issue allowing a better reading of the bone tissue. © 2017 Wiley Periodicals, Inc.

77 FR 40901 - Notice of Inventory Completion: Gregg County Historical Museum, Longview, TX

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-11

... adult, one adult of unknown sex, and one juvenile of unknown sex. The human remains from Burial 6 include an occipital cranial bone fragment of one adult of unknown sex. The human remains from Burial 7 include one adult of unknown sex. No known individuals were identified. The 11 associated funerary objects...

Extremely high frequency of autoimmune-predisposing alleles in medieval specimens*

PubMed Central

Witas, H.W.; Jędrychowska-Dańska, K.; Zawicki, P.

2007-01-01

The precise etiology and reasons for the increase in incidence of autoimmune disorders still remain unclear, and although both genetic and environmental factors have been proven to shape individual predisposition, it is not known which of the factors, if not both, is responsible for the boom observed during the last decades. In order to establish whether a higher frequency of autoimmune-predisposing alleles may explain this increase we took advantage of ancient DNA methodology to establish the genetic predisposition, conferred by cytotoxic T lymphocyte associated antigen-4 (CTLA4) +49A/G and human leukocyte antigens (HLA) DQB157, in population inhabiting Poland in the Middle Ages. After successful typing of 42 individuals from a 12th~14th’s century archeological burial site, we found that frequencies of the predisposing alleles in the medieval population were higher than they are at present, suggesting thus that the recently observed incidence increase results most probably from factors of other than genetic nature. PMID:17610332

The impact of sediment burial and erosion on seagrasses: A review

NASA Astrophysics Data System (ADS)

Cabaço, Susana; Santos, Rui; Duarte, Carlos M.

2008-09-01

The available information from experimental and descriptive studies on the effects of sediment burial and erosion on seagrasses was compiled to synthesize the information regarding the species-specific impacts and to relate them to plant characteristics. Burial thresholds (i.e. the burial levels causing 50% and 100% shoot mortality) and mortality-burial curves were estimated for the 15 seagrass species where the effects of experimental burial have been tested. All the species investigated reached 50% shoot mortality at burial levels ranging from 2 cm ( Halophila ovalis) to 19.5 cm ( Posidonia australis). P. australis was the most tolerant seagrass species to burial, while Thalassia testudinum was the most tolerant species to erosion. The relationships among plant size, growth, biomass and density with burial thresholds were examined. There were significant relationships between the burial thresholds and the shoot mass, the rhizome diameter, the aboveground biomass, the horizontal rhizome elongation and the leaf length of seagrass species. The leaf size and the rhizome diameter are the best predictors of the capacity of seagrasses to withstand burial. The burial thresholds estimated for seagrass species were in many cases in agreement with the burial impacts described by field observations (bioturbation), while in some cases was related to the species long-term colonization capacity (dune migration). Most human-induced impacts result in important changes of the sedimentary environment, with permanent negative effects on seagrass meadows (regression and complete destruction), whereas natural events, whether extreme (hurricane) or regular (dune migration), allow the recovery and/or adaptation of seagrasses to the burial/erosion sediment dynamics. The extent of the effects of burial and erosion on seagrasses is species-specific and strongly size-dependent.

Genomic signals of migration and continuity in Britain before the Anglo-Saxons.

PubMed

Martiniano, Rui; Caffell, Anwen; Holst, Malin; Hunter-Mann, Kurt; Montgomery, Janet; Müldner, Gundula; McLaughlin, Russell L; Teasdale, Matthew D; van Rheenen, Wouter; Veldink, Jan H; van den Berg, Leonard H; Hardiman, Orla; Carroll, Maureen; Roskams, Steve; Oxley, John; Morgan, Colleen; Thomas, Mark G; Barnes, Ian; McDonnell, Christine; Collins, Matthew J; Bradley, Daniel G

2016-01-19

The purported migrations that have formed the peoples of Britain have been the focus of generations of scholarly controversy. However, this has not benefited from direct analyses of ancient genomes. Here we report nine ancient genomes (∼ 1 ×) of individuals from northern Britain: seven from a Roman era York cemetery, bookended by earlier Iron-Age and later Anglo-Saxon burials. Six of the Roman genomes show affinity with modern British Celtic populations, particularly Welsh, but significantly diverge from populations from Yorkshire and other eastern English samples. They also show similarity with the earlier Iron-Age genome, suggesting population continuity, but differ from the later Anglo-Saxon genome. This pattern concords with profound impact of migrations in the Anglo-Saxon period. Strikingly, one Roman skeleton shows a clear signal of exogenous origin, with affinities pointing towards the Middle East, confirming the cosmopolitan character of the Empire, even at its northernmost fringes.

Genomic signals of migration and continuity in Britain before the Anglo-Saxons

PubMed Central

Martiniano, Rui; Caffell, Anwen; Holst, Malin; Hunter-Mann, Kurt; Montgomery, Janet; Müldner, Gundula; McLaughlin, Russell L.; Teasdale, Matthew D.; van Rheenen, Wouter; Veldink, Jan H.; van den Berg, Leonard H.; Hardiman, Orla; Carroll, Maureen; Roskams, Steve; Oxley, John; Morgan, Colleen; Thomas, Mark G.; Barnes, Ian; McDonnell, Christine; Collins, Matthew J.; Bradley, Daniel G.

2016-01-01

The purported migrations that have formed the peoples of Britain have been the focus of generations of scholarly controversy. However, this has not benefited from direct analyses of ancient genomes. Here we report nine ancient genomes (∼1 ×) of individuals from northern Britain: seven from a Roman era York cemetery, bookended by earlier Iron-Age and later Anglo-Saxon burials. Six of the Roman genomes show affinity with modern British Celtic populations, particularly Welsh, but significantly diverge from populations from Yorkshire and other eastern English samples. They also show similarity with the earlier Iron-Age genome, suggesting population continuity, but differ from the later Anglo-Saxon genome. This pattern concords with profound impact of migrations in the Anglo-Saxon period. Strikingly, one Roman skeleton shows a clear signal of exogenous origin, with affinities pointing towards the Middle East, confirming the cosmopolitan character of the Empire, even at its northernmost fringes. PMID:26783717

"Interred with their bones" - linking soil micromorphology and chemistry to unlock the hidden archive of archaeological human burials

NASA Astrophysics Data System (ADS)

Brothwell, Don; Usai, Maria-Raimonda; Keely, Brendan; Pickering, Matt; Wilson, Clare

2010-05-01

"Interred with their bones" Acronym: InterArChive - an ERC-funded project *** " Friends, Romans, countrymen, lend me your ears; " I come to bury Caesar, not to praise him. " The evil that men do lives after them; " The good is oft 'interred with their bones'; " So let it be with Caesar. William Shakespeare, Julius Caesar, Act III, Scene 2. *** Background The state of decay within soils in archaeological graves is often such that degradable objects are not preserved in a condition that can be visually recognised. However, microscopic soil features, inorganic element distributions and organic residues can be measured. Thus, archaeological burial soils have the potential to reveal signatures of decay; pre-burial treatment; presence and nature of associated clothing and perishable artefacts; diet of the individual; cause of death; evidence of morbidity and drug-use. Aims • To develop and test a multidisciplinary approach linking soil micromorphology and chemistry to recover environmental and cultural information; • Revealing the hidden archaeological archive within the burial soil • Developing soil sampling and analysis recommendations for archaeological human burials Methods 1: Sampling and soil field description from archaeological sites contrasting in soil, geology, age, and culture and from experimental piglet burials 2: Microscopic/micromorphological analysis (micro-scale observations) of remains and features in burial soils. We will establish the order of occurrence, spatial patterns, displacement, mode of formation and decay of micromorphological features including exotic components, parasites, hair and remnants of footwear and clothing [cf. pilot study of soils from Yemen]; microfabrics and textural pedofeatures, also to facilitate resolution of body decay products from other accumulations. 3: Microprobe analysis (nano-scale) will generate elemental maps of soil thin sections, allowing identification of features with distinct chemical signatures, including those not identifiable by micromorphology. 4: Organic chemical analysis: Organic residues will be analysed by gas (GC) or liquid (LC) chromatography and selected fractions by mass spectrometry (MS; GC-MS and LC-MS). MALDI imaging will produce image maps of the soil sections with false color images representing lipids, proteins and peptides Relevance of the research and expected results This soil study will reveal hidden secrets that inform understanding of cultural practices of and environmental conditions experienced by past civilisations. It will deliver a comprehensive inventory of soil morphology and chemistry for a wide range of archaeological human burial environments, linking morphological and chemical characteristics both at a general level and at a level that visually and chemically resolves individual microscopic remains. Thus, excavation of archaeological human graves, for cultural reconstruction and to understand mortuary practices, archaeological burial practices and aspects of human health, will be enhanced dramatically.

Isotopically zoned carbonate cements in Early Paleozoic sandstones of the Illinois Basin: δ18O and δ13C records of burial and fluid flow

NASA Astrophysics Data System (ADS)

Denny, Adam C.; Kozdon, Reinhard; Kitajima, Kouki; Valley, John W.

2017-11-01

SEM/SIMS imaging and analysis of δ18O and δ13C in sandstones from a transect through the Illinois Basin (USA) show systematic μm-scale isotopic zonation of up to 10‰ in both carbonate and quartz cements of the middle-Ordovician St. Peter and Cambrian Mt. Simon formations. Quartz δ18O values are broadly consistent with the model of Hyodo et al. (2014), wherein burial and heating in the Illinois Basin is recorded in systematically zoned quartz overgrowths. Observations of zoned dolomite/ankerite cements indicate that they preserve a more extended record of temperature and fluid compositions than quartz, including early diagenesis before or during shallow burial, and late carbonates formed after quartz overgrowths. Many carbonate cements show innermost dolomite with δ18O values (21-25‰ VSMOW) that are too low to have formed by deposition at low temperatures from ancient seawater (δ18O > - 3‰) and most likely reflect mixing with meteoric water. A sharp increase in Fe content is commonly observed in zoned carbonate cements to be associated with a drop in δ18O and an abrupt shift in δ13C to higher or lower values. These changes are interpreted to record the passage of hot metal-rich brines through sandstone aquifers, that was associated with Mississippi-Valley Type (MVT) Pb-Zn deposits (ca. 270 Ma) of the Upper Mississippi Valley. Local variability and individual trends in δ13C are likely controlled by the sources of carbon and the degree to which carbon is sourced from adjacent carbonate units or thermal maturation of organic matter. Quartz overgrowths in sandstones provide an excellent record of conditions during burial, heating, and pressure-solution, whereas carbonate cements in sandstones preserve a more-extended record including initial pre-burial conditions and punctuated fluid flow events.

Evidence supporting an intentional Neandertal burial at La Chapelle-aux-Saints.

PubMed

Rendu, William; Beauval, Cédric; Crevecoeur, Isabelle; Bayle, Priscilla; Balzeau, Antoine; Bismuth, Thierry; Bourguignon, Laurence; Delfour, Géraldine; Faivre, Jean-Philippe; Lacrampe-Cuyaubère, François; Tavormina, Carlotta; Todisco, Dominique; Turq, Alain; Maureille, Bruno

2014-01-07

The bouffia Bonneval at La Chapelle-aux-Saints is well known for the discovery of the first secure Neandertal burial in the early 20th century. However, the intentionality of the burial remains an issue of some debate. Here, we present the results of a 12-y fieldwork project, along with a taphonomic analysis of the human remains, designed to assess the funerary context of the La Chapelle-aux-Saints Neandertal. We have established the anthropogenic nature of the burial pit and underlined the taphonomic evidence of a rapid burial of the body. These multiple lines of evidence support the hypothesis of an intentional burial. Finally, the discovery of skeletal elements belonging to the original La Chapelle aux Saints 1 individual, two additional young individuals, and a second adult in the bouffia Bonneval highlights a more complex site-formation history than previously proposed.

Shifting diets and the rise of male-biased inequality on the Central Plains of China during Eastern Zhou.

PubMed

Dong, Yu; Morgan, Chelsea; Chinenov, Yurii; Zhou, Ligang; Fan, Wenquan; Ma, Xiaolin; Pechenkina, Kate

2017-01-31

Farming domesticated millets, tending pigs, and hunting constituted the core of human subsistence strategies during Neolithic Yangshao (5000-2900 BC). Introduction of wheat and barley as well as the addition of domesticated herbivores during the Late Neolithic (∼2600-1900 BC) led to restructuring of ancient Chinese subsistence strategies. This study documents a dietary shift from indigenous millets to the newly introduced cereals in northcentral China during the Bronze Age Eastern Zhou Dynasty (771-221 BC) based on stable isotope analysis of human and animal bone samples. Our results show that this change affected females to a greater degree than males. We find that consumption of the newly introduced cereals was associated with less consumption of animal products and a higher rate of skeletal stress markers among females. We hypothesized that the observed separation of dietary signatures between males and females marks the rise of male-biased inequality in early China. We test this hypothesis by comparing Eastern Zhou human skeletal data with those from Neolithic Yangshao archaeological contexts. We find no evidence of male-female inequality in early farming communities. The presence of male-biased inequality in Eastern Zhou society is supported by increased body height difference between the sexes as well as the greater wealth of male burials.

Radiological and archaeological investigation of a mummy from Roman Egypt curated in the National Museum of Lithuania.

PubMed

Piombino-Mascali, Dario; Jankauskas, Rimantas; Snitkuvienė, Aldona; Rutkauskas, Tadas; Sutherland, M Linda

2016-01-01

Among the collections belonging to the National Museum of Lithuania at Vilnius, resides an ancient Egyptian coffin containing a mummified human body. The coffin and its occupant are believed to have belonged to the King of Poland and to have been located in his palace at Warsaw. At the turn of the last century, Egyptologists dated the coffin to the end of the 21st dynasty (1070 BC-945 BC), and described the item as coming from Thebes, belonging to Hori, priest of Amun-Ra. However, no investigation was ever carried out on the human body associated with the coffin. Within the framework of the Lithuanian Mummy Project, the preserved human remains underwent computed tomographic investigation in order to reconstruct the biological profile of the subject and to determine the embalming method employed. This led to the identification of a young adult male. Additionally, the mummy shroud was stylistically assessed in order to determine the mummy's chronology in Egyptian history. Interestingly, the body could be ascribed to the Roman period of Egypt (30 BC-395 AD) due to analogies with the burial shrouds of the Soter group. This indicates a reuse of the coffin at some point in history.

Organic chemistry of balms used in the preparation of pharaonic meat mummies.

PubMed

Clark, Katherine A; Ikram, Salima; Evershed, Richard P

2013-12-17

The funeral preparations for ancient Egyptian dead were extensive. Tomb walls were often elaborately painted and inscribed with scenes and objects deemed desirable for the afterlife. Votive objects, furniture, clothing, jewelry, and importantly, food including bread, cereals, fruit, jars of wine, beer, oil, meat, and poultry were included in the burial goods. An intriguing feature of the meat and poultry produced for the deceased from the highest levels of Egyptian society was that they were mummified to ensure their preservation. However, little is known about the way they were prepared, such as whether balms were used, and if they were used, how they compared with those applied to human and animal mummies? We present herein the results of lipid biomarker and stable carbon isotope investigations of tissues, bandaging, and organic balms associated with a variety of meat mummies that reveal that treatments ranged from simple desiccation and wrapping in bandages to, in the case of the tomb of Yuya and Tjuia (18th Dynasty, 1386-1349 BC), a balm associated with a beef rib mummy containing a high abundance of Pistacia resin and, thus, more sophisticated than the balms found on many contemporaneous human mummies.

Organic chemistry of balms used in the preparation of pharaonic meat mummies

PubMed Central

Clark, Katherine A.; Ikram, Salima; Evershed, Richard P.

2013-01-01

The funeral preparations for ancient Egyptian dead were extensive. Tomb walls were often elaborately painted and inscribed with scenes and objects deemed desirable for the afterlife. Votive objects, furniture, clothing, jewelry, and importantly, food including bread, cereals, fruit, jars of wine, beer, oil, meat, and poultry were included in the burial goods. An intriguing feature of the meat and poultry produced for the deceased from the highest levels of Egyptian society was that they were mummified to ensure their preservation. However, little is known about the way they were prepared, such as whether balms were used, and if they were used, how they compared with those applied to human and animal mummies? We present herein the results of lipid biomarker and stable carbon isotope investigations of tissues, bandaging, and organic balms associated with a variety of meat mummies that reveal that treatments ranged from simple desiccation and wrapping in bandages to, in the case of the tomb of Yuya and Tjuia (18th Dynasty, 1386–1349 BC), a balm associated with a beef rib mummy containing a high abundance of Pistacia resin and, thus, more sophisticated than the balms found on many contemporaneous human mummies. PMID:24248384

25 CFR 20.210 - Can eligibility criteria or payments for Burial Assistance, Child Assistance, and Disaster...

Code of Federal Regulations, 2012 CFR

2012-04-01

... BUREAU OF INDIAN AFFAIRS, DEPARTMENT OF THE INTERIOR HUMAN SERVICES FINANCIAL ASSISTANCE AND SOCIAL SERVICES PROGRAMS Welfare Reform § 20.210 Can eligibility criteria or payments for Burial Assistance, Child...

Paleomobility in the Tiwanaku diaspora: biogeochemical analyses at Rio Muerto, Moquegua, Peru.

PubMed

Knudson, Kelly J; Goldstein, Paul S; Dahlstedt, Allisen; Somerville, Andrew; Schoeninger, Margaret J

2014-11-01

Paleomobility has been a key element in the study of the expansion of ancient states and empires, including the Tiwanaku polity of the South Central Andes (AD 500-1000). We present radiogenic strontium and oxygen isotope data from human burials from three cemeteries in the Tiwanaku-affiliated Middle Horizon archaeological site complex of Rio Muerto in the Moquegua Valley of southern Peru. At Rio Muerto, archaeological human enamel and bone values range from (87) Sr/(86) Sr = 0.70657-0.72018, with a mean of (87) Sr/(86) Sr = 0.70804 ± 0.00207 (1σ, n = 55). For the subset of samples analyzed for oxygen isotope values (n = 48), the data ranges from δ(18) Ocarbonate(VSMOW)  = +18.1 to +27.0‰. When contextualized with other lines of archaeological evidence, we interpret these data as evidence for an archaeological population in which the majority of individuals had "local" origins, and were likely second-generation, or more, immigrants from the Tiwanaku heartland in the altiplano. Based on detailed life history data, we argue a smaller number of individuals came at different ages from various regions within the Tiwanaku polity. We consider whether these individuals with isotopic values consistent with "nonlocal" geographic origins could represent first-generation migrants, marriage exchange partners, or occupationally mobile herders, traders or other travelers. By combining isotopic life history studies with mortuary treatment data, we use a person-centered migration history approach to state integration and expansion. Isotopic analyses of paleomobility at the Rio Muerto site complex contribute to the role of diversity in ancient states by demonstrating the range of geographic origins rather than simply colonists from the Lake Titicaca Basin. © 2014 Wiley Periodicals, Inc.

Geophysical monitoring of simulated graves with resistivity, magnetic susceptibility, conductivity and GPR in Colombia, South America.

PubMed

Molina, Carlos Martin; Pringle, Jamie K; Saumett, Miguel; Evans, Gethin T

2016-04-01

In most Latin American countries there are significant numbers of both missing people and forced disappearances, ∼71,000 Colombia alone. Successful detection of buried human remains by forensic search teams can be difficult in varying terrain and climates. Three clandestine burials were simulated at two different depths commonly encountered in Latin America. In order to gain critical knowledge of optimum geophysical detection techniques, burials were monitored using: ground penetrating radar, magnetic susceptibility, bulk ground conductivity and electrical resistivity up to twenty-two months post-burial. Radar survey results showed good detection of modern 1/2 clothed pig cadavers throughout the survey period on 2D profiles, with the 250MHz antennae judged optimal. Both skeletonised and decapitated and burnt human remains were poorly imaged on 2D profiles with loss in signal continuity observed throughout the survey period. Horizontal radar time slices showed good anomalies observed over targets, but these decreased in amplitude over the post-burial time. These were judged due to detecting disturbed grave soil rather than just the buried targets. Magnetic susceptibility and electrical resistivity were successful at target detection in contrast to bulk ground conductivity surveys which were unsuccessful. Deeper burials were all harder to image than shallower ones. Forensic geophysical surveys should be undertaken at suspected burial sites. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

From first to latest imaging technology: Revisiting the first mummy investigated with X-ray in 1896 by using dual-source computed tomography.

PubMed

Zesch, Stephanie; Panzer, Stephanie; Rosendahl, Wilfried; Nance, John W; Schönberg, Stefan O; Henzler, Thomas

2016-01-01

The aim of this study was to systematically reinvestigate the first human mummy that was ever analyzed with X-ray imaging in 1896, using dual-source computed tomography (DSCT) in order to compare the earliest and latest imaging technologies, to estimate preservation, age at death, sex, anatomical variants, paleopathological findings, mummification, embalming and wrapping of the child mummy from ancient Egypt. Radiocarbon dating was used to determine the mummy's age and to specify the child's living period in the Egyptian chronology. The ancient Egyptian child mummy is kept in the Senckenberg Museum of Natural History in Frankfurt am Main, Germany. An accelerator mass spectrometer (MICADAS) was used for radiocarbon dating. DSCT was performed using a 2 × 64 slice dual-source CT system (Siemens Healthineers, Forchheim, Germany). A thorough visual examination of the mummy, a systematic radiological evaluation of the DICOM datasets, and established methods in physical anthropology were applied to assess the bio-anthropological data and the post mortem treatment of the body. Radiocarbon dating yielded a calibrated age between 378 and 235 cal BC (95.4% confidence interval), corresponding with the beginning of the Ptolemaic period. The mummy was a male who was four to five years old at the time of death. Remnants of the brain and inner organs were preserved by the embalmers, which is regularly observed in ancient Egyptian child mummies. Skin tissue, inner organs, tendons and/or musculature, cartilage, nerves and vasculature could be identified on the DSCT dataset. The dental health of the child was excellent. Anatomical variants and pathological defects included a congenital Pectus excavatum deformity, hepatomegaly, Harris lines, and longitudinal clefts in the ventral cortices of both femora. Our results highlight the enormous progress achieved form earliest to latest imaging technology for advanced mummy research using the first human mummy investigated with X-ray. With the application of DSCT, detailed knowledge regarding age at death, sex, diseases, death, and mummification of a child from Ptolemaic Egypt are revealed while considering the temporary rites of body treatment and burial for children.

Early evidence (ca. 12,000 B.P.) for feasting at a burial cave in Israel

PubMed Central

Munro, Natalie D.; Grosman, Leore

2010-01-01

Feasting is one of humanity's most universal and unique social behaviors. Although evidence for feasting is common in the early agricultural societies of the Neolithic, evidence in pre-Neolithic contexts is more elusive. We found clear evidence for feasting on wild cattle and tortoises at Hilazon Tachtit cave, a Late Epipaleolithic (12,000 calibrated years B.P.) burial site in Israel. This includes unusually high densities of butchered tortoise and wild cattle remains in two structures, the unique location of the feasting activity in a burial cave, and the manufacture of two structures for burial and related feasting activities. The results indicate that community members coalesced at Hilazon to engage in special rituals to commemorate the burial of the dead and that feasts were central elements in these important events. Feasts likely served important roles in the negotiation and solidification of social relationships, the integration of communities, and the mitigation of scalar stress. These and other social changes in the Natufian period mark significant changes in human social complexity that continued into the Neolithic period. Together, social and economic change signal the very beginning of the agricultural transition. PMID:20805510

Low prevalence of lactase persistence in Neolithic South-West Europe

PubMed Central

Plantinga, Theo S; Alonso, Santos; Izagirre, Neskuts; Hervella, Montserrat; Fregel, Rosa; van der Meer, Jos WM; Netea, Mihai G; de la Rúa, Concepcion

2012-01-01

The ability of humans to digest the milk component lactose after weaning requires persistent production of the lactose-converting enzyme lactase. Genetic variation in the promoter of the lactase gene (LCT) is known to be associated with lactase production and is therefore a genetic determinant for either lactase deficiency or lactase persistence during adulthood. Large differences in this genetic trait exist between populations in Africa and the Middle-East on the one hand, and European populations on the other; this is thought to be due to evolutionary pressures exerted by consumption of dairy products in Neolithic populations in Europe. In this study, we have investigated lactase persistence of 26 out of 46 individuals from Late Neolithic through analysis of ancient South-West European DNA samples, obtained from two burials in the Basque Country originating from 5000 to 4500 YBP. This investigation revealed that these populations had an average frequency of lactase persistence of 27%, much lower than in the modern Basque population, which is compatible with the concept that Neolithic and post-Neolithic evolutionary pressures by cattle domestication and consumption of dairy products led to high lactase persistence in Southern European populations. Given the heterogeneity in the frequency of the lactase persistence allele in ancient Europe, we suggest that in Southern Europe the selective advantage of lactose assimilation in adulthood most likely took place from standing population variation, after cattle domestication, at a post-Neolithic time when fresh milk consumption was already fully adopted as a consequence of a cultural influence. PMID:22234158

Effects of hydrated lime and quicklime on the decay of buried human remains using pig cadavers as human body analogues.

PubMed

Schotsmans, Eline M J; Denton, John; Dekeirsschieter, Jessica; Ivaneanu, Tatiana; Leentjes, Sarah; Janaway, Rob C; Wilson, Andrew S

2012-04-10

Recent casework in Belgium involving the search for human remains buried with lime, demonstrated the need for more detailed understanding of the effect of different types of lime on cadaver decomposition and its micro-environment. Six pigs (Sus scrofa) were used as body analogues in field experiments. They were buried without lime, with hydrated lime (Ca(OH)(2)) and with quicklime (CaO) in shallow graves in sandy loam soil in Belgium and recovered after 6 months of burial. Observations from these field recoveries informed additional laboratory experiments that were undertaken at the University of Bradford, UK. The combined results of these studies demonstrate that despite conflicting evidence in the literature, hydrated lime and quicklime both delay the decay of the carcass during the first 6 months. This study has implications for the investigation of clandestine burials and for a better understanding of archaeological plaster burials. Knowledge of the effects of lime on decomposition processes also has bearing on practices involving burial of animal carcasses and potentially the management of mass graves and mass disasters by humanitarian organisations and DVI teams. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

Human cremation in Mexico 3,000 years ago.

PubMed

Duncan, William N; Balkansky, Andrew K; Crawford, Kimberly; Lapham, Heather A; Meissner, Nathan J

2008-04-08

Mixtec nobles are depicted in codices and other proto-historic documentation taking part in funerary rites involving cremation. The time depth for this practice was unknown, but excavations at the early village site of Tayata, in the southern state of Oaxaca, Mexico, recovered undisturbed cremation burials in contexts dating from the eleventh century B.C. These are the earliest examples of a burial practice that in later times was reserved for Mixtec kings and Aztec emperors. This article describes the burial contexts and human remains, linking Formative period archaeology with ethnohistorical descriptions of Mixtec mortuary practices. The use of cremation to mark elevated social status among the Mixtec was established by 3,000 years ago, when hereditary differences in rank were first emerging across Mesoamerica.

Human cremation in Mexico 3,000 years ago

PubMed Central

Duncan, William N.; Balkansky, Andrew K.; Crawford, Kimberly; Lapham, Heather A.; Meissner, Nathan J.

2008-01-01

Mixtec nobles are depicted in codices and other proto-historic documentation taking part in funerary rites involving cremation. The time depth for this practice was unknown, but excavations at the early village site of Tayata, in the southern state of Oaxaca, Mexico, recovered undisturbed cremation burials in contexts dating from the eleventh century B.C. These are the earliest examples of a burial practice that in later times was reserved for Mixtec kings and Aztec emperors. This article describes the burial contexts and human remains, linking Formative period archaeology with ethnohistorical descriptions of Mixtec mortuary practices. The use of cremation to mark elevated social status among the Mixtec was established by 3,000 years ago, when hereditary differences in rank were first emerging across Mesoamerica. PMID:18391213

Modeling Chemical and Isotopic Variations in Lab Formed Hydrothermal Carbonates

NASA Technical Reports Server (NTRS)

Niles, P. B.; Leshin, L. A.; Golden, D. C.; Socki, R. A.; Guan, Y.; Ming, D. W.

2005-01-01

Chemical and mineralogical data (e.g. [1]) from Mars suggest that the history of liquid water on the planet was more sporadic in nature than long-lived. The non-equilibrium chemical and isotopic compositions of the carbonates preserved in the martian meteorite ALH84001 are direct evidence of ancient secondary minerals that have not undergone significant diagenesis or stabilization processes typical of long-lived aqueous systems on Earth. Thus secondary minerals and sediments on Mars may primarily record the characteristics of the aqueous environment in which they formed without being significantly overprinted by subsequent diagenetic processes during burial.

Modelling the buried human body environment in upland climes using three contrasting field sites.

PubMed

Wilson, Andrew S; Janaway, Robert C; Holland, Andrew D; Dodson, Hilary I; Baran, Eve; Pollard, A Mark; Tobin, Desmond J

2007-06-14

Despite an increasing literature on the decomposition of human remains, whether buried or exposed, it is important to recognise the role of specific microenvironments which can either trigger or delay the rate of decomposition. Recent casework in Northern England involving buried and partially buried human remains has demonstrated a need for a more detailed understanding of the effect of contrasting site conditions on cadaver decomposition and on the microenvironment created within the grave itself. Pigs (Sus scrofa) were used as body analogues in three inter-related taphonomy experiments to examine differential decomposition of buried human remains. They were buried at three contrasting field sites (pasture, moorland, and deciduous woodland) within a 15 km radius of the University of Bradford, West Yorkshire, UK. Changes to the buried body and the effect of these changes on hair and associated death-scene textile materials were monitored as was the microenvironment of the grave. At recovery, 6, 12 and 24 months post-burial, the extent of soft tissue decomposition was recorded and samples of fat and soil were collected for gas chromatography mass spectrometry (GCMS) analysis. The results of these studies demonstrated that (1) soil conditions at these three burial sites has a marked effect on the condition of the buried body but even within a single site variation can occur; (2) the process of soft tissue decomposition modifies the localised burial microenvironment in terms of microbiological load, pH, moisture and changes in redox status. These observations have widespread application for the investigation of clandestine burial and time since deposition, and in understanding changes within the burial microenvironment that may impact on biomaterials such as hair and other associated death scene materials.

Widespread mixing and burial of Earth's Hadean crust by asteroid impacts.

PubMed

Marchi, S; Bottke, W F; Elkins-Tanton, L T; Bierhaus, M; Wuennemann, K; Morbidelli, A; Kring, D A

2014-07-31

The history of the Hadean Earth (∼4.0-4.5 billion years ago) is poorly understood because few known rocks are older than ∼3.8 billion years old. The main constraints from this era come from ancient submillimetre zircon grains. Some of these zircons date back to ∼4.4 billion years ago when the Moon, and presumably the Earth, was being pummelled by an enormous flux of extraterrestrial bodies. The magnitude and exact timing of these early terrestrial impacts, and their effects on crustal growth and evolution, are unknown. Here we provide a new bombardment model of the Hadean Earth that has been calibrated using existing lunar and terrestrial data. We find that the surface of the Hadean Earth was widely reprocessed by impacts through mixing and burial by impact-generated melt. This model may explain the age distribution of Hadean zircons and the absence of early terrestrial rocks. Existing oceans would have repeatedly boiled away into steam atmospheres as a result of large collisions as late as about 4 billion years ago.

Earthquake-induced burial of archaeological sites along the southern Washington coast about A.D. 1700

USGS Publications Warehouse

Cole, S.C.; Atwater, B.F.; McCutcheon, P.T.; Stein, J.K.; Hemphill-Haley, E.

1996-01-01

Although inhabited by thousands of people when first reached by Europeans, the Pacific coast of southern Washington has little recognized evidence of prehistoric human occupation. This apparent contradiction may be explained partly by geologic evidence for coastal submergence during prehistoric earthquakes on the Cascadia subduction zone. Recently discovered archaeological sites, exposed in the banks of two tidal streams, show evidence for earthquake-induced submergence and consequent burial by intertidal mud about A.D. 1700. We surmise that, because of prehistoric earthquakes, other archaeological sites may now lie hidden beneath the surfaces of modern tidelands. Such burial of archaeological sites raises questions about the estimation of prehistoric human population densities along coasts subject to earthquake-induced submergence. ?? 1996 John Wiley & Sons, Inc.

New ages for human occupation and climatic change at Lake Mungo, Australia.

PubMed

Bowler, James M; Johnston, Harvey; Olley, Jon M; Prescott, John R; Roberts, Richard G; Shawcross, Wilfred; Spooner, Nigel A

2003-02-20

Australia's oldest human remains, found at Lake Mungo, include the world's oldest ritual ochre burial (Mungo III) and the first recorded cremation (Mungo I). Until now, the importance of these finds has been constrained by limited chronologies and palaeoenvironmental information. Mungo III, the source of the world's oldest human mitochondrial DNA, has been variously estimated at 30 thousand years (kyr) old, 42-45 kyr old and 62 +/- 6 kyr old, while radiocarbon estimates placed the Mungo I cremation near 20-26 kyr ago. Here we report a new series of 25 optical ages showing that both burials occurred at 40 +/- 2 kyr ago and that humans were present at Lake Mungo by 50-46 kyr ago, synchronously with, or soon after, initial occupation of northern and western Australia. Stratigraphic evidence indicates fluctuations between lake-full and drier conditions from 50 to 40 kyr ago, simultaneously with increased dust deposition, human arrival and continent-wide extinction of the megafauna. This was followed by sustained aridity between 40 and 30 kyr ago. This new chronology corrects previous estimates for human burials at this important site and provides a new picture of Homo sapiens adapting to deteriorating climate in the world's driest inhabited continent.

Superfund record of decision (EPA region 10): Idaho National Engineering Lab, (USDOE) Operable Unit 26 (Stationary Low-Power Reactor-1 and Boiling Water Reactor Experiment-I Burial Grounds), Idaho Falls, ID, December 1, 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1997-03-01

This document presents the selected remedial action for the Stationary Low-Power Reactor-1 (SL-1) burial ground, the Boiling Water Reactor Experiment-I (BORAX-I) burial ground, and 10 no action sites in Waste Area Group 5. Actual or threatened releases of hazardous substances from the SL-1 and BORAX-I burial grounds, if not addressed by implementing the response action selected in this Record of Decision, may present a current or potential threat to public health, welfare, or the environment. The 10 no action sites do not present a threat to human health or the environment.

Shifting diets and the rise of male-biased inequality on the Central Plains of China during Eastern Zhou

PubMed Central

Dong, Yu; Morgan, Chelsea; Chinenov, Yurii; Zhou, Ligang; Fan, Wenquan; Ma, Xiaolin

2017-01-01

Farming domesticated millets, tending pigs, and hunting constituted the core of human subsistence strategies during Neolithic Yangshao (5000–2900 BC). Introduction of wheat and barley as well as the addition of domesticated herbivores during the Late Neolithic (∼2600–1900 BC) led to restructuring of ancient Chinese subsistence strategies. This study documents a dietary shift from indigenous millets to the newly introduced cereals in northcentral China during the Bronze Age Eastern Zhou Dynasty (771–221 BC) based on stable isotope analysis of human and animal bone samples. Our results show that this change affected females to a greater degree than males. We find that consumption of the newly introduced cereals was associated with less consumption of animal products and a higher rate of skeletal stress markers among females. We hypothesized that the observed separation of dietary signatures between males and females marks the rise of male-biased inequality in early China. We test this hypothesis by comparing Eastern Zhou human skeletal data with those from Neolithic Yangshao archaeological contexts. We find no evidence of male–female inequality in early farming communities. The presence of male-biased inequality in Eastern Zhou society is supported by increased body height difference between the sexes as well as the greater wealth of male burials. PMID:28096406

The early colonial atlantic world: New insights on the African Diaspora from isotopic and ancient DNA analyses of a multiethnic 15th-17th century burial population from the Canary Islands, Spain.

PubMed

Santana, Jonathan; Fregel, Rosa; Lightfoot, Emma; Morales, Jacob; Alamón, Martha; Guillén, José; Moreno, Marco; Rodríguez, Amelia

2016-02-01

The Canary Islands are considered one of the first places where Atlantic slave plantations with labourers of African origin were established, during the 15th century AD. In Gran Canaria (Canary Islands, Spain), a unique cemetery dated to the 15th and 17th centuries was discovered adjacent to an ancient sugar plantation with funerary practices that could be related to enslaved people. In this article, we investigate the origin and possible birthplace of each individual buried in this cemetery, as well as the identity and social status of these people. The sample consists of 14 individuals radiocarbon dated to the 15th and 17th centuries AD. We have employed several methods, including the analysis of ancient human DNA, stable isotopes, and skeletal markers of physical activity. 1) the funerary practices indicate a set of rituals not previously recorded in the Canary Islands; 2) genetic data show that some people buried in the cemetery could have North-African and sub-Saharan African lineages; 3) isotopic results suggest that some individuals were born outside Gran Canaria; and 4) markers of physical activity show a pattern of labour involving high levels of effort. This set of evidence, along with information from historical sources, suggests that Finca Clavijo was a cemetery for a multiethnic marginalized population that had being likely enslaved. Results also indicate that this population kept practicing non-Christian rituals well into the 17th century. We propose that this was possible because the location of the Canaries, far from mainland Spain and the control of the Spanish Crown, allowed the emergence of a new society with multicultural origins that was more tolerant to foreign rituals and syncretism. © 2015 Wiley Periodicals, Inc.

Distribution of ancient carbon in buried soils in an eroding loess landscape

NASA Astrophysics Data System (ADS)

Szymanski, L. M.; Mason, J. A.; De Graaff, M. A.; Berhe, A. A.; Marin-Spiotta, E.

2017-12-01

Understanding the processes that contribute to the accumulation and loss of carbon in soils and the implications for land management is vital for mitigating climate change. Buried soils or paleosols that represent former surface horizons can store more organic carbon than mineral horizons at equivalent depths due to burial restricting microbial decomposition. The presence of buried soils defies modeled expectations of exponential declines in carbon concentrations with depth, especially in locations where successive depositional events lead to multiple buried soil layers. Buried soils are found in a diversity of depositional environments across latitudes and without accounting for their presence can lead to underestimates of regional carbon reservoirs. Here we present data on the spatial distribution of carbon in a paleosol loess sequence in Nebraska, focusing on one prominent paleosol, the Brady soil. The Brady soil has been identified throughout the Central Great Plains and began developing at the end of the Pleistocene and was subsequently buried by loess in the early Holocene (Mason et al. 2003). Preliminary analyses of the Brady soil at its deepest, 6-m below the surface, reveal large differences in the composition and degree of decomposition of organic matter from the modern soil. We sampled along burial and erosional transects to characterize spatial variability in the depth of Brady soil from the modern landscape surface and to determine how these differences may alter the amount and composition of organic carbon. A more accurate determination of the spatial extent and heterogeneity of buried soil carbon will improve regional estimates of carbon reservoirs. This assessment of its variability across the landscape will inform future planned work on the vulnerability of ancient carbon to disturbance.

Earth Observation

NASA Image and Video Library

2012-07-25

ISS032-E-009123 (26 July 2012) --- Pyramids at Giza, Egypt are featured in this image photographed by an Expedition 32 crew member on the International Space Station. The Great Pyramids at Giza (center) are the last of the Seven Wonders of the Ancient World, and are perhaps the most famous of the ancient monuments in the Nile River Delta region of Egypt. They are also a favorite subject of photography from orbit ? particularly when high resolution imagery can be obtained. The southeast-facing sides of the pyramids of the pharaohs Khufu, Khafre, and Menkaure are all brightly illuminated by the sun, while the northwest facing sides are in shadow. This shadowing also highlights smaller unfinished pyramids to the south of Menkaure?s pyramid, as well as fields of rectangular flat roofed mastabas (tombs) to the east and west of Khufu?s pyramid. While not as grand as the pyramids, mastabas were the burial places of prominent persons during the periods of the ancient pharaohs. To the southeast of Khufu?s pyramid, the head and rear haunches of the Sphinx are also visible (albeit not clearly). It is a short distance between the glories of ancient Egypt and the modern Cairo metropolitan area to the north and east. The green vegetation of a hotel golf course (center left), and the numerous building and streets of El Giza, provide stark contrast to the bare rock and soil of the adjacent desert. Roadways visible in the desert (right) connect the urban regions to the east with further development to the north.

Tracing the origin of the east-west population admixture in the Altai region (Central Asia).

PubMed

González-Ruiz, Mercedes; Santos, Cristina; Jordana, Xavier; Simón, Marc; Lalueza-Fox, Carles; Gigli, Elena; Aluja, Maria Pilar; Malgosa, Assumpció

2012-01-01

A recent discovery of Iron Age burials (Pazyryk culture) in the Altai Mountains of Mongolia may shed light on the mode and tempo of the generation of the current genetic east-west population admixture in Central Asia. Studies on ancient mitochondrial DNA of this region suggest that the Altai Mountains played the role of a geographical barrier between West and East Eurasian lineages until the beginning of the Iron Age. After the 7th century BC, coinciding with Scythian expansion across the Eurasian steppes, a gradual influx of East Eurasian sequences in Western steppes is detected. However, the underlying events behind the genetic admixture in Altai during the Iron Age are still unresolved: 1) whether it was a result of migratory events (eastward firstly, westward secondly), or 2) whether it was a result of a local demographic expansion in a 'contact zone' between European and East Asian people. In the present work, we analyzed the mitochondrial DNA lineages in human remains from Bronze and Iron Age burials of Mongolian Altai. Here we present support to the hypothesis that the gene pool of Iron Age inhabitants of Mongolian Altai was similar to that of western Iron Age Altaians (Russia and Kazakhstan). Thus, this people not only shared the same culture (Pazyryk), but also shared the same genetic east-west population admixture. In turn, Pazyryks appear to have a similar gene pool that current Altaians. Our results further show that Iron Age Altaians displayed mitochondrial lineages already present around Altai region before the Iron Age. This would provide support for a demographic expansion of local people of Altai instead of westward or eastward migratory events, as the demographic event behind the high population genetic admixture and diversity in Central Asia.

Tracing the Origin of the East-West Population Admixture in the Altai Region (Central Asia)

PubMed Central

González-Ruiz, Mercedes; Santos, Cristina; Jordana, Xavier; Simón, Marc; Lalueza-Fox, Carles; Gigli, Elena; Aluja, Maria Pilar; Malgosa, Assumpció

2012-01-01

A recent discovery of Iron Age burials (Pazyryk culture) in the Altai Mountains of Mongolia may shed light on the mode and tempo of the generation of the current genetic east-west population admixture in Central Asia. Studies on ancient mitochondrial DNA of this region suggest that the Altai Mountains played the role of a geographical barrier between West and East Eurasian lineages until the beginning of the Iron Age. After the 7th century BC, coinciding with Scythian expansion across the Eurasian steppes, a gradual influx of East Eurasian sequences in Western steppes is detected. However, the underlying events behind the genetic admixture in Altai during the Iron Age are still unresolved: 1) whether it was a result of migratory events (eastward firstly, westward secondly), or 2) whether it was a result of a local demographic expansion in a ‘contact zone’ between European and East Asian people. In the present work, we analyzed the mitochondrial DNA lineages in human remains from Bronze and Iron Age burials of Mongolian Altai. Here we present support to the hypothesis that the gene pool of Iron Age inhabitants of Mongolian Altai was similar to that of western Iron Age Altaians (Russia and Kazakhstan). Thus, this people not only shared the same culture (Pazyryk), but also shared the same genetic east-west population admixture. In turn, Pazyryks appear to have a similar gene pool that current Altaians. Our results further show that Iron Age Altaians displayed mitochondrial lineages already present around Altai region before the Iron Age. This would provide support for a demographic expansion of local people of Altai instead of westward or eastward migratory events, as the demographic event behind the high population genetic admixture and diversity in Central Asia. PMID:23152818

Ancient DNA analyses of early archaeological sites in New Zealand reveal extreme exploitation of moa (Aves: Dinornithiformes) at all life stages

NASA Astrophysics Data System (ADS)

Oskam, Charlotte L.; Allentoft, Morten E.; Walter, Richard; Scofield, R. Paul; Haile, James; Holdaway, Richard N.; Bunce, Michael; Jacomb, Chris

2012-10-01

The human colonisation of New Zealand in the late thirteenth century AD led to catastrophic impacts on the local biota and is among the most compelling examples of human over-exploitation of native fauna, including megafauna. Nearly half of the species in New Zealand' s pre-human avifauna are now extinct, including all nine species of large, flightless moa (Aves: Dinornithiformes). The abundance of moa in early archaeological sites demonstrates the significance of these megaherbivores in the diet of the first New Zealanders. Combining moa assemblage data, based on DNA identification of eggshell and bone, with morphological identification of bone (literature and museum catalogued specimens), we present the most comprehensive audit of moa to date from several significant 13th-15th century AD archaeological deposits across the east coast of the South Island. Mitochondrial DNA (mtDNA) was amplified from 251 of 323 (78%) eggshell fragments and 22 of 27 (88%) bone samples, and the analyses revealed the presence of four moa species: Anomalopteryx didiformis; Dinornis robustus; Emeus crassus and Euryapteryx curtus. The mtDNA, along with polymorphic microsatellite markers, enabled an estimate of the minimum number of individual eggs consumed at each site. Remarkably, in one deposit over 50 individual eggs were identified - a number that likely represents a considerable proportion of the total reproductive output of moa in the area and emphasises that human predation of all life stages of moa was intense. Molecular sexing was conducted on bones (n = 11). Contrary to previous ancient DNA studies from natural sites that consistently report an excess of female moa, we observed an excess of males (2.7:1), suggestive that males were preferential targets. This could be related to different behaviour between the two highly size-dimorphic sexes in moa. Lastly, we investigated the moa species from recovered skeletal and eggshell remains from seven Wairau Bar burials, and identified the presence of only the larger species of moa, E. curtus and D. robustus.

Sr Isotopes and human skeletal remains, improving a methodological approach in migration studies

NASA Astrophysics Data System (ADS)

Solis Pichardo, G.; Schaaf, P. E.; Hernandez, T.; Horn, P.; Manzanilla, L. R.

2013-12-01

Asserting mobility of ancient humans is a major issue for anthropologists. Sr isotopes are widely used in anthropological sciences to trace human migration histories from ancient burials. Sr in bone approximately reflects the isotopic composition of the geological region where the person lived before death; whereas the Sr isotopic system in tooth enamel is thought to remain as a closed system and thus conserves the isotope ratio acquired during childhood. A comparison of the 87Sr/86Sr ratios found in tooth enamel and in bone is performed to determine if the human skeletal remains belonged to a local or a migrant. Until now, tooth enamel was considered to be less sensitive to secondary Sr contamination due to its higher crystallinity and larger sizes of the biogenic apatites in comparison to that in bone and dentine. In the past, enamel as well as bone material was powdered, dissolved and analyzed by thermal ionization mass spectrometry (TIMS). In this contribution we show, however, that simple dissolution of enamel frequently yields erroneous results. Tooth enamel is often affected by secondary strontium contamination processes such as caries or diagenetic and environmental input, which can change the original isotopic composition. To avoid these problems we introduced a pre-treatment and three-step leaching procedure in enamel samples. Leaching is carried out with acetic acid of different concentrations, yielding two leachates and one residue of each sample. Frequently the 87Sr/86Sr results of the three leachates display different values confirming that secondary contamination did occur. Several examples from Teotihuacan, central Mexico demonstrate that enamel 87Sr/86Sr without leaching can show correct biogenic values, but there is also a considerable probability for these values to represent a mixture of original and secondary Sr without significance for migration reconstructions. Only the residue value is interpreted by us as the representative ratio for original enamel isotopic compositions. Without leaching, an enamel mean value would have been obtained; possibly without significance for the determination of the migration origin.

Long-lasting ergot lipids as new biomarkers for assessing the presence of cereals and cereal products in archaeological vessels.

PubMed

Lucejko, Jeannette J; La Nasa, Jacopo; Porta, Francesca; Vanzetti, Alessandro; Tanda, Giuseppa; Mangiaracina, Claudio Filippo; Corretti, Alessandro; Colombini, Maria Perla; Ribechini, Erika

2018-03-02

Cereals were very important in ancient diets, however evidence from archaeological sites of the vessels used for processing or storing cereals is comparatively rare. Micro-organisms, as well as chemical-physical effects can easily degrade cereals during the burial period. This can lead to a complete cereal decay and to serious difficulties in estimating the intensity of use of the cereals by ancient populations. Here, we present a novel biomarker approach entailing the detection of secondary lipid metabolites produced by ergot fungi (genus Claviceps), which are common cereal pests. The aim was to identify the original presence of Gramineae and to indirectly establish if vessels were used for cereal storage/processing. The fatty acid and TAG-estolide profiles of the remains from more than 30 archaeological vessels were investigated by gas chromatography/mass spectrometry (GC/MS) and high performance liquid chromatography/high resolution mass spectrometry (HPLC/ESI-Q-ToF). The detection of lipids derived from ergot in archaeological and historic contexts rests on its complex chemistry, providing a unique and relatively recalcitrant chemical signature for cereals. This research demonstrated that the combination of our innovative biomarker approach along with environmental and archaeological evidence can provide unprecedented insights into the incidence of cereals and related processing activities in ancient societies.

Characterization of Mycobacterium tuberculosis Complex DNAs from Egyptian Mummies by Spoligotyping

PubMed Central

Zink, Albert R.; Sola, Christophe; Reischl, Udo; Grabner, Waltraud; Rastogi, Nalin; Wolf, Hans; Nerlich, Andreas G.

2003-01-01

Bone and soft tissue samples from 85 ancient Egyptian mummies were analyzed for the presence of ancient Mycobacterium tuberculosis complex DNA (aDNA) and further characterized by spoligotyping. The specimens were obtained from individuals from different tomb complexes in Thebes West, Upper Egypt, which were used for upper social class burials between the Middle Kingdom (since ca. 2050 BC) and the Late Period (until ca. 500 BC). A total of 25 samples provided a specific positive signal for the amplification of a 123-bp fragment of the repetitive element IS6110, indicating the presence of M. tuberculosis DNA. Further PCR-based tests for the identification of subspecies failed due to lack of specific amplification products in the historic tissue samples. Of these 25 positive specimens, 12 could be successfully characterized by spoligotyping. The spoligotyping signatures were compared to those in an international database. They all show either an M. tuberculosis or an M. africanum pattern, but none revealed an M. bovis-specific pattern. The results from a Middle Kingdom tomb (used exclusively between ca. 2050 and 1650 BC) suggest that these samples bear an M. africanum-type specific spoligotyping signature. The samples from later periods provided patterns typical for M. tuberculosis. This study clearly demonstrates that spoligotyping can be applied to historic tissue samples. In addition, our results do not support the theory that M. tuberculosis originated from the M. bovis type but, rather, suggest that human M. tuberculosis may have originated from a precursor complex probably related to M. africanum. PMID:12517873

Characterisation of corrosion layers formed under burial environment of copper-based Greek and Roman coins from Pompeii

NASA Astrophysics Data System (ADS)

Pronti, Lucilla; Felici, Anna Candida; Alesiani, Marcella; Tarquini, Ombretta; Bracciale, Maria Paola; Santarelli, Maria Laura; Pardini, Giacomo; Piacentini, Mario

2015-10-01

This paper reports on a study carried out on patinas covering copper-based Greek and Roman coins found in the archaeological excavation of Regio VIII.7.1-15 in Pompeii (Italy). Since in cultural heritage ancient artefacts should not be damaged, non-destructive and micro-destructive techniques have been used to identify typical and uncommon compounds and to characterize the surface morphology. The chlorine content of light green patinas and the presence of typical minerals allowed us to identify the bronze disease. Coins from the same stratigraphic unit have shown different morphologies of corrosion, probably due to different micro-environmental conditions.

Mine burial in the seabed of high-turbidity area—Findings of a first experiment

NASA Astrophysics Data System (ADS)

Baeye, Matthias; Fettweis, Michael; Legrand, Sebastien; Dupont, Yves; Van Lancker, Vera

2012-07-01

The seabed of the North Sea is covered with ammunition dating back from World Wars I and II. With increasing human interference (e.g. fisheries, aggregate extraction, harbor related activities), it forms a threat to the safety at sea. In this study, test mines were deployed on a sandy seabed for 3 months to investigate mine burial processes as a function of hydrodynamic and meteorological conditions. The mine experiment was conducted in a shallow (9 m), macrotidal environment characterized by highly turbid waters (yearly and depth-averaged suspended particulate matter concentration of 100 mg l-1). Results showed some variability of the overall mine burial, which corresponded with scouring processes induced by a (sub-) tidal forcing mechanism. The main burial events however were linked to storm-related scouring processes, and subsequent mine roll into the resulting pit. Two storms affecting the mines during the 3-month experiment resulted in enduring increases in burial volume to 60% and 80%, respectively. More cyclic and ephemeral burial and exposure events appear to be linked to the local hydrodynamic regime. During slack tides, suspended sediment settles on the seabed, increasing the burial volume. In between slack tides, sediment is resuspended, decreasing the burial volume. The temporal pattern of this never reported burial mechanism, as measured optically, mimics the cyclicity of the suspended sediment concentration as recorded by ultrasonic signals at a nearby benthic observatory. Given the similarity in response signals at the two sites, we hypothesize that the formation of high-concentrated mud suspensions (HCMS) is a mechanism causing short-term burial and exposure of mines. This short-term burial and exposure increase the chance that mines are 'missed' during tracking surveys. Test mines contribute to our understanding of the settling and erosion of HCMS, and thus shed a light on generic sedimentary processes.

Forest Resources, Chiefdoms and Mortuary Practices in the Neotropics: Preliminary Archaeobotanical Analysis from El Caño Funerary Complex (Coclé Province, Panamá)

NASA Astrophysics Data System (ADS)

Martín Seijo, M.; Torné, J. Mayo; Torné, C. Mayo; Huerta, R. Piqué i.

2012-04-01

El Caño site is situated on the Pacific side of Panamá, near the Río Grande. It's a funerary complex comprising different types of structures (stone structures -basalt columns, groups of sculptures and a causeway-; earthen mounds and canals; burials). The excavations supervised by Julia Mayo between 2008 and 2011 allowed to discover several lavish burials estimated to date between 700 and 1000 AD (Mayo & Mayo 2012). The data recovered has served as source of information for the pre-Columbian chiefdoms and their mortuary practices. There was carried out a detailed taphonomic study to register the complex formation processes of these burial deposits, and the significant post-depositional transformations (anthropogenic and natural processes) (Mayo & Mayo in press). Also during the excavations were recovered archaeobotanical samples; most of them charcoals. The laboratory work process consisted in the exhaustive description of the anatomical features of the different taxa identified during the charcoal analyses (the identification level varied from species to family, although in several case we couldn't propose any taxa). These samples were concentrated in structures, and in few cases dispersed in the sediment. Some of the samples analyzed were large pieces of charcoal of the wooden beams from ancient wood structures, and other pieces of charcoal and vegetable fibers were related directly with the burial practices. The charcoal analysis results aim to contribute to the knowledge of the exploitation of forest resources, of the territories where these resources were collected, and of the production process (chaîne opératoire). These results were complemented with the exhaustive review of written sources (spanish chronicles), ethnobotanical studies and archaeological data of other sites in this area. Acknowledgements: This research was developed under El Caño Archaeological Project and was funded by SENACYT (Secretaría Nacional de Ciencia y Tecnología de Panamá).

Initial Insights into the Quaternary Evolution of the Laurentide Ice Sheet on Southeastern Baffin Island

NASA Astrophysics Data System (ADS)

Pendleton, S.; Anderson, R. S.; Miller, G. H.; Refsnider, K. A.

2015-12-01

Increasing Arctic summer temperatures in recent decades and shrinking cold-based ice caps on Cumberland Peninsula, Baffin Island, are exposing ancient landscapes complete with uneroded bedrock surfaces. Previous work has indicated that these upland surfaces covered with cold-based ice experience negligible erosion compared with the valleys and fjords systems that contain fast-flowing ice. Given the appearance of highly weathered bedrock, it is argued that these landscapes have remained largely unchanged since at least the last interglaciation (~120 ka), and have likely experienced multiple cycles of ice expansion and retraction with little erosion throughout the Quaternary. To explore this hypothesis, we use multiple cosmogenic radionuclides (26Al and 10Be) to investigate and provide insight into longer-term cryosphere activity and landscape evolution. 26Al/10Be in surfaces recently exposed exhibit a wide range of exposure-burial histories. Total exposure-burial times range from ~0.3 - 1.5 My and estimated erosion rates from 0.5 - 6.2 m Ma-1. The upland surfaces of the Penny Ice cap generally experienced higher erosion rates (~0.45 cm ka-1) than those covered by smaller ice caps (~0.2 cm ka-1). The cumulative burial/exposure histories in high, fjord-edge locations indicate that significant erosion north of the Penny Ice Cap ceased between ~600 and 800 ka, suggesting that Laurentide Ice Sheet (LIS) organization and fjord inception was underway by at least this time. Additionally, 26Al/10Be ratios near production values despite high inventories from a coastal summit 50 km east of the Penny Ice Cape suggest that that area has not experienced appreciable burial by ice, suggesting that it was never inundated by the LIS. Moreover, these initial data suggest a variable and dynamic cryosphere in the region and provide insight into how large ice sheets evolved and organized themselves during the Quaternary.

Holocene age of the Yuha burial: Direct radiocarbon determinations by accelerator mass spectrometry

USGS Publications Warehouse

Stafford, Thomas W.; Jull, A.J.T.; Zabel, T.H.; Donahue, D.J.; Duhamel, R.C.; Brendel, K.; Haynes, C.V.; Bischoff, J.L.; Payen, L.A.; Taylor, R.E.

1984-01-01

The view that human populations may not have arrived in the Western Hemisphere before about 12,000 radiocarbon yr BP1,2 has been challenged by claims of much greater antiquity for a small number of archaeological sites and human skeleton samples. One such site is the Homo sapiens sapiens cairn burial excavated in 1971 from the Yuha desert, Imperial County, California3-5. Radiocarbon analysis of caliche coating one of the bones of the skeleton yielded a radiocarbon age of 21,500??1,000 yr BP4, while radiocarbon and uranium series analyses of caliche coating a cairn boulder yielded ages of 22,125??400 and 19,000??3,000 yr BP, respectively5. The late Pleistocene age assignment to the Yuha burial has been challenged by comparing the cultural context of the burial with other cairn burials in the same region6, on the basis of the site's geomorphological context and from radiocarbon analyses of soil caliches. 7,8 In rebuttal, arguments in defence of the original age assignment have been presented9,10 as well as an amino acid racemization analysis on the Yuha skeleton indicating an age of 23,600??2,600 yr BP11. The tandem accelerator mass spectrometer at the University of Arizona has now been used to measure the ratio of 14C/13C in several organic and inorganic fractions of post-cranial bone from the Yuha H. sapiens sapiens skeleton. Isotope ratios from six chemical fractions all yielded radiocarbon ages for the skeleton of less than 4,000 yr BP. These results indicate that the Yuha skeleton is of Holocene age, in agreement with the cultural context of the burial, and in disagreement with the previously assigned Pleistocene age of 19,000-23,000 yr. ?? 1984 Nature Publishing Group.

A distinct section of the Early Bronze Age society? Stable isotope investigations of burials in settlement pits and multiple inhumations of the Únětice culture in central Germany.

PubMed

Knipper, Corina; Fragata, Matthias; Nicklisch, Nicole; Siebert, Angelina; Szécsényi-Nagy, Anna; Hubensack, Vera; Metzner-Nebelsick, Carola; Meller, Harald; Alt, Kurt W

2016-03-01

Inhumations in so-called settlement pits and multiple interments are subordinate burial practices of the Early Bronze Age Únětice culture in central Germany (2200-1700/1650 BC). The majority of the Únětice population was entombed as single inhumations in rectangular grave pits with a normative position of the body. The goal of the study was to test archaeological hypotheses that the deviant burials may represent socially distinct or nonlocal individuals. The study comprised up to two teeth and one bone each of 74 human individuals from eight sites and faunal comparative samples. The inhumations included regular, deviant burials in so-called settlement or storage pits, and multiple burials. We investigated radiogenic strontium isotope compositions of tooth enamel ((87) Sr/(86) Sr) and light stable isotope ratios of carbon and nitrogen of bone collagen (δ(13) C, δ(15) N) aiming at the disclosure of residential changes and dietary patterns. Site-specific strontium isotope data ranges mirror different geological properties including calcareous bedrock, loess, and glacial till. Independent from burial types, they disclose low portions of nonlocal individuals of up to some 20% at the individual sites. The light stable isotope ratios of burials in settlement pits and rectangular graves overlap widely and indicate highly similar dietary habits. The analytical results let to conclude that inhumations in settlement pits and multiple burials were two of the manifold burial practices of the Early Bronze Age. The selection criteria of the individuals for the different forms of inhumation remained undisclosed. © 2015 Wiley Periodicals, Inc.

Evaluation of the diffusion of Mn, Fe, Ba and Pb in Middle Ages human teeth by synchrotron microprobe X-ray fluorescence

NASA Astrophysics Data System (ADS)

Carvalho, M. L.; Marques, A. F.; Marques, J. P.; Casaca, C.

2007-07-01

Human teeth from the Middle Ages have been analysed using a synchrotron microprobe evaluating Mn, Fe, Ba and Pb diffusion from the soil into the tooth structure. It is apparent that post-mortem teeth of ancient populations are influenced by the endogenous environment. The diffusion pattern of some elements can give information both for archaeological purposes and diagenesis processes affecting the apatite ante-mortem elemental content. An X-ray fluorescence set-up with microprobe capabilities, 100 μm of spatial resolution and energy of 18 keV, installed at LURE synchrotron (France) was used. Line scans were performed along the several regions of the teeth, in steps of 100 to 1000 μm. Ba is much enriched in ancient teeth when compared to recent ones, where this element is almost non-existent. Furthermore, the concentration profiles show increased levels of this element close to the external enamel region, reaching values up to 200 μg g - 1 decreasing in dentine and achieving a steady level in the inner dentine and root. Pb concentration profiles show strongly increased levels of this element close to the external enamel region (20 μg g - 1 ), decreasing strongly to the inner part of the dentine (0.5 μg g - 1 ) contrarily to the normal situation in modern citizens where the highest concentrations for Pb are in the inner root dentine. This behaviour suggests post-mortem uptake from the soil; the presence of elevated levels of Pb can be explained by the fact that this burial place was a car park for more than 20 years. The distribution of Mn and Fe follow very similar patterns and both are very much enriched especially in the outer surfaces in contact with the soil, showing strong contamination from the soil.

Roe v. Wade. On abortion.

PubMed

French, M

1998-01-01

In ancient Assyria, fathers held the right of life or death over their newborn infants, but women found to have performed an abortion on themselves or others were impaled and denied burial. This punishment was otherwise reserved for crimes against the state such as high treason or assault on the king. Likewise, in Babylon if a wife arranged her husband's death so that she could marry another man, she was convicted of treason and impaled or crucified. Thus, ancient thought paralleled the husband-wife relationship with that of the state-subject. The small group of men who generally dominate institutions such as the state, the church, or a corporation have a primary demand for obedience and deference to their supreme authority from their underlings. These groups did not condemn abortion because it involved questions of life or death. After all, many states have permitted infanticide, many still sanction execution, and all are willing to sacrifice the lives of their soldiers in war. Patriarchs condemn abortion because they consider it treasonous for a woman to assert the right to use her own judgement and to treat her body as if it were her own and not the property of her husband. This denies the supremacy of the male, which is the first principle of patriarchs. Because patriarchal institutions depend upon the subjection of women, women's bodies become important markers in the struggle for human freedom. This explains why patriarchal institutions in the US have continuously attacked women's right to abortion by fragmenting the statute allowing abortion and attempting to render the fragments illegal. While US women have won other rights that can be protected legally, women require the right to abortion in order to possess the right to physical integrity and to be able to undo what men have done to them. Otherwise, men would be able to create a set-back in women's human rights by forcing women into motherhood.

Mycobacterium leprae genomes from a British medieval leprosy hospital: towards understanding an ancient epidemic.

PubMed

Mendum, Tom A; Schuenemann, Verena J; Roffey, Simon; Taylor, G Michael; Wu, Huihai; Singh, Pushpendra; Tucker, Katie; Hinds, Jason; Cole, Stewart T; Kierzek, Andrzej M; Nieselt, Kay; Krause, Johannes; Stewart, Graham R

2014-04-08

Leprosy has afflicted humankind throughout history leaving evidence in both early texts and the archaeological record. In Britain, leprosy was widespread throughout the Middle Ages until its gradual and unexplained decline between the 14th and 16th centuries. The nature of this ancient endemic leprosy and its relationship to modern strains is only partly understood. Modern leprosy strains are currently divided into 5 phylogenetic groups, types 0 to 4, each with strong geographical links. Until recently, European strains, both ancient and modern, were thought to be exclusively type 3 strains. However, evidence for type 2 strains, a group normally associated with Central Asia and the Middle East, has recently been found in archaeological samples in Scandinavia and from two skeletons from the medieval leprosy hospital (or leprosarium) of St Mary Magdalen, near Winchester, England. Here we report the genotypic analysis and whole genome sequencing of two further ancient M. leprae genomes extracted from the remains of two individuals, Sk14 and Sk27, that were excavated from 10th-12th century burials at the leprosarium of St Mary Magdalen. DNA was extracted from the surfaces of bones showing osteological signs of leprosy. Known M. leprae polymorphisms were PCR amplified and Sanger sequenced, while draft genomes were generated by enriching for M. leprae DNA, and Illumina sequencing. SNP-typing and phylogenetic analysis of the draft genomes placed both of these ancient strains in the conserved type 2 group, with very few novel SNPs compared to other ancient or modern strains. The genomes of the two newly sequenced M. leprae strains group firmly with other type 2F strains. Moreover, the M. leprae strain most closely related to one of the strains, Sk14, in the worldwide phylogeny is a contemporaneous ancient St Magdalen skeleton, vividly illustrating the epidemic and clonal nature of leprosy at this site. The prevalence of these type 2 strains indicates that type 2F strains, in contrast to later European and associated North American type 3 isolates, may have been the co-dominant or even the predominant genotype at this location during the 11th century.

ACHP | Archeology Task Force

Science.gov Websites

Task Force ACHP adopts new Policy Statement Regarding Treatment of Burial Sites, Human Remains, and Treatment of Human Remains and Grave Goods;" A new human remains policy statement was adopted in

A Study on Generic Representation of Skeletal Remains Replication of Prehistoric Burial

NASA Astrophysics Data System (ADS)

Shao, C.-W.; Chiu, H.-L.; Chang, S.-K.

2015-08-01

Generic representation of skeletal remains from burials consists of three dimensions which include physical anthropologists, replication technicians, and promotional educators. For the reason that archaeological excavation is irreversible and disruptive, detail documentation and replication technologies are surely needed for many purposes. Unearthed bones during the process of 3D digital scanning need to go through reverse procedure, 3D scanning, digital model superimposition, rapid prototyping, mould making, and the integrated errors generated from the presentation of colours and textures are important issues for the presentation of replicate skeleton remains among professional decisions conducted by physical anthropologists, subjective determination of makers, and the expectations of viewers. This study presents several cases and examines current issues on display and replication technologies for human skeletal remains of prehistoric burials. This study documented detail colour changes of human skeleton over time for the reference of reproduction. The tolerance errors of quantification and required technical qualification is acquired according to the precision of 3D scanning, the specification requirement of rapid prototyping machine, and the mould making process should following the professional requirement for physical anthropological study. Additionally, the colorimeter is adopted to record and analyse the "colour change" of the human skeletal remains from wet to dry condition. Then, the "colure change" is used to evaluate the "real" surface texture and colour presentation of human skeletal remains, and to limit the artistic presentation among the human skeletal remains reproduction. The"Lingdao man No.1", is a well preserved burial of early Neolithic period (8300 B.P.) excavated from Liangdao-Daowei site, Matsu, Taiwan , as the replicating object for this study. In this study, we examined the reproduction procedures step by step for ensuring the surface texture and colour of the replica matches the real human skeletal remains when discovered. The "colour change" of the skeleton documented and quantified in this study could be the reference for the future study and educational exhibition of human skeletal remain reproduction.

Evaluation method of leachate leaking from carcass burial site

NASA Astrophysics Data System (ADS)

Park, S.; Kim, H.; Lee, M.; Lee, K.; Kim, S.; Kim, M.; Kim, H.; Kim, T.; Han, J.

2012-12-01

More than 150,000 cattle carcasses and 3,140,000 pig carcasses were buried all over the nation in Korea because of 2010 outbreak of foot and mouth disease (FMD). Various disposal Techniques such as incineration, composting, rendering, and burial have been developed and applied to effectively dispose an animal carcass. Since a large number of carcasses should be disposed for a short-term period to prevent the spread of FMD virus, most of the carcasses were disposed by mass burial technique. However, a long-term management and monitoring of leachate discharges are required because mass burial can cause soil and groundwater contamination. In this study, we used key parameters related to major components of leachate such as NH4-N, NO3-N, Cl-, E.coli and electrical conductivity as potential leachate contamination indicator to determine leachate leakage from the site. We monitored 300 monitoring wells in both burial site and the monitoring well 5m away from burial sites to identify leachate leaking from burial site. Average concentration of NH3-N in 300 monitoring wells, both burial site and the well 5m away from burial sites, were 2,593 mg/L and 733 mg/L, respectively. 24% out of 300 monitoring wells showed higher than 10 mg/L NH4-N, 100 mg/L Cl- and than 800 μS/cm electrical conductivity. From this study, we set up 4 steps guidelines to evaluate leachate leakage like; step 1 : High potential step of leachate leakage, step 2 : Middle potential step of leachate leakage, step 3 : Low potential step of leachate leakage, step 4 : No leachate leakage. On the basis of this result, we moved 34 leachate leaking burial sites to other places safely and it is necessary to monitor continuously the monitoring wells for environmental protection and human health.

An Evaluation of the Historical Importance of Fertility and Its Reflection in Ancient Mythology

PubMed Central

Behjati-Ardakani, Zohreh; Akhondi, Mohammad Mehdi; Mahmoodzadeh, Homa; Hosseini, Seyed Hasan

2016-01-01

Myths are reflective of human concerns and needs during ancient times. By reviewing them, it turns out that many human problems today, have a historical background. Among the main themes of ancient mythologies, fertility and reproduction have various representations in ancient civilizations. The purpose of this paper was to review myths and common symbols of fertility and reproduction in ancient civilizations and evaluate the reasons of their continuous importance in different cultures. The data in this review study was obtained by scrutinizing the related literature. The gathered data indicated the multiplicity and variety of fertility symbols in ancient myths. Most ancient fertility symbols were inspired by the nature and some of them like earth and water were common in mythology of different civilizations. Therefore, the symbols consolidate the concept of conformity between human reproductive concerns and the nature's necessities. PMID:26962477

An Evaluation of the Historical Importance of Fertility and Its Reflection in Ancient Mythology.

PubMed

Behjati-Ardakani, Zohreh; Akhondi, Mohammad Mehdi; Mahmoodzadeh, Homa; Hosseini, Seyed Hasan

2016-01-01

Myths are reflective of human concerns and needs during ancient times. By reviewing them, it turns out that many human problems today, have a historical background. Among the main themes of ancient mythologies, fertility and reproduction have various representations in ancient civilizations. The purpose of this paper was to review myths and common symbols of fertility and reproduction in ancient civilizations and evaluate the reasons of their continuous importance in different cultures. The data in this review study was obtained by scrutinizing the related literature. The gathered data indicated the multiplicity and variety of fertility symbols in ancient myths. Most ancient fertility symbols were inspired by the nature and some of them like earth and water were common in mythology of different civilizations. Therefore, the symbols consolidate the concept of conformity between human reproductive concerns and the nature's necessities.

Ancient Egypt

NASA Astrophysics Data System (ADS)

Swamy, Ashwin Balegar

This thesis involves development of an interactive GIS (Geographic Information System) based application, which gives information about the ancient history of Egypt. The astonishing architecture, the strange burial rituals and their civilization were some of the intriguing questions that motivated me towards developing this application. The application is a historical timeline starting from 3100 BC, leading up to 664 BC, focusing on the evolution of the Egyptian dynasties. The tool holds information regarding some of the famous monuments which were constructed during that era and also about the civilizations that co-existed. It also provides details about the religions followed by their kings. It also includes the languages spoken during those periods. The tool is developed using JAVA, a programing language and MOJO (Map Objects Java Objects) a product of ESRI (Environmental Science Research Institute) to create map objects, to provide geographic information. JAVA Swing is used for designing the user interface. HTML (Hyper Text Markup Language) pages are created to provide the user with more information related to the historic period. CSS (Cascade Style Sheets) and JAVA Scripts are used with HTML5 to achieve creative display of content. The tool is kept simple and easy for the user to interact with. The tool also includes pictures and videos for the user to get a feel of the historic period. The application is built to motivate people to know more about one of the prominent and ancient civilization of the Mediterranean world.

Magnetometry and Ground-Penetrating Radar Studies in the Sihuas Valley, Peru

NASA Astrophysics Data System (ADS)

Wisnicki, E.; Papadimitrios, K.; Bank, C.

2013-12-01

The Quillcapampa la Antigua site in Peru's Sihuas Valley is a settlement from Peru's Middle Horizon (600-100 A.D.). Archaeological interest in the area stems from the question of whether ancient civilizations were able to have extensive state control of distant groups, or whether state influence occurred through less direct ties (e.g., marriage, religion, or trade). Our geophysical surveys are preliminary to archaeological digging in the area. Ground-penetrating radar and magnetometry attempt to locate areas of interest for focused archaeological excavation, characterize the design of architectural remains and burial mounds in the area, and allow archaeologists to interpret the amount of influence the Wari civilization had on the local residents.

Phanerozoic burial and unroofing history of the western Slave craton and Wopmay orogen from apatite (U-Th)/He thermochronometry

NASA Astrophysics Data System (ADS)

Ault, Alexis K.; Flowers, Rebecca M.; Bowring, Samuel A.

2009-06-01

Low temperature thermochronometry of cratonic regions can illuminate relationships among burial and unroofing patterns, surface subsidence and uplift, and lithosphere-asthenosphere interactions. The Slave craton, initially stabilized by the development of a thick lithospheric mantle root in late Archean time, is an excellent location in which to examine these connections. Although the Slave craton currently lacks Phanerozoic cover, Phanerozoic sedimentary xenoliths entrained in ca. 610 to 45 Ma kimberlites indicate that the region underwent a more dynamic history of burial and unroofing than widely recognized. We report new apatite (U-Th)/He thermochronometry data along a southeast to northwest transect from the interior of the Slave craton into the adjacent Paleoproterozoic Wopmay orogen to resolve the region's depositional and denudational history. Six samples from the western Slave craton and three samples from Wopmay orogen yield mean dates from 296 ± 41 Ma to 212 ± 39 Ma. Individual apatite dates are broadly uniform over a wide span of apatite [eU], and this pattern can be used to more tightly restrict the spectrum of viable temperature-time paths that can explain the dataset. When coupled with geologic and stratigraphic information, temperature-time simulations of the thermochronometry results suggest complete He loss from the apatites at minimum peak temperatures of ~ 88 °C in Devonian-Pennsylvanian time, cooling to near-surface conditions by the Early Cretaceous, followed by reheating to ≤ 72 °C during Cretaceous-Early Tertiary time. Consideration of modern and ancient geotherm constraints implies ≥ 3.3 km of burial during the first Phanerozoic heating phase, with an ancillary phase of reburial in late Mesozoic-Cenozoic time. The uniformity of the apatite (U-Th)/He dates indicates that the rocks encompassed by our > 250 km-long sample transect experienced similar Phanerozoic thermal histories. Despite the distinctly different lithospheric architecture on either side of the Paleoproterozoic suture between the Slave craton and Wopmay orogen, the region behaved as a single, broadly coherent cratonic unit since at least ca. 250 Ma. The Phanerozoic burial and unroofing patterns across the craton may be a response to far-field convergent activity at the northern and western margins of North America and processes associated with episodic kimberlite emplacement.

The utility of ground-penetrating radar and its time-dependence in the discovery of clandestine burials.

PubMed

Salsarola, Dominic; Poppa, Pasquale; Amadasi, Alberto; Mazzarelli, Debora; Gibelli, Daniele; Zanotti, Emma; Porta, Davide; Cattaneo, Cristina

2015-08-01

In the field of forensic investigation burial is a relatively common method of hiding a corpse. The location of clandestine graves is, however, a particularly difficult task in which multiple forensic disciplines such as anthropology, botany or archaeology can provide valuable assistance. The use of GPR (ground-penetrating radar) has recently been introduced as a method in the detection of these graves, but what is the true potential of this tool in an operative search scenario? In this study a total of 11 pig carcasses were buried in two wooded areas, each presenting a similar soil composition. The animals were subsequently exhumed at regular intervals, ranging from 2 to 111 weeks, using systematic GPR analysis of the burial sites and archaeological recovery of the subjects that were then autopsied. GPR proved to be useful in recognizing anomalies at the chosen depths of burial and appeared to be dependent on the state of decay of the samples, producing only slight anomalous readings in the presence of skeletal remains: at 92 weeks from burial the difference in signal was weak and at 111 weeks GPR survey offered no helpful information as to burial location. The experiment, in this particular context, determined the technique as being successful in the presence of recent burials, highlighting the need for a multidisciplinary approach in the operative search for buried human remains. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Skeletal Remains from Punic Carthage Do Not Support Systematic Sacrifice of Infants

PubMed Central

Schwartz, Jeffrey H.; Houghton, Frank; Macchiarelli, Roberto; Bondioli, Luca

2010-01-01

Two types of cemeteries occur at Punic Carthage and other Carthaginian settlements: one centrally situated housing the remains of older children through adults, and another at the periphery of the settlement (the “Tophet”) yielding small urns containing the cremated skeletal remains of very young animals and humans, sometimes comingled. Although the absence of the youngest humans at the primary cemeteries is unusual and worthy of discussion, debate has focused on the significance of Tophets, especially at Carthage, as burial grounds for the young. One interpretation, based on two supposed eye-witness reports of large-scale Carthaginian infant sacrifice [Kleitarchos (3rd c. BCE) and Diodorus Siculus (1st c. BCE)], a particular translation of inscriptions on some burial monuments, and the argument that if the animals had been sacrificed so too were the humans, is that Tophets represent burial grounds reserved for sacrificial victims. An alternative hypothesis acknowledges that while the Carthaginians may have occasionally sacrificed humans, as did their contemporaries, the extreme youth of Tophet individuals suggests these cemeteries were not only for the sacrificed, but also for the very young, however they died. Here we present the first rigorous analysis of the largest sample of cremated human skeletal remains (348 burial urns, N = 540 individuals) from the Carthaginian Tophet based on tooth formation, enamel histology, cranial and postcranial metrics, and the potential effects of heat-induced bone shrinkage. Most of the sample fell within the period prenatal to 5-to-6 postnatal months, with a significant presence of prenates. Rather than indicating sacrifice as the agent of death, this age distribution is consistent with modern-day data on perinatal mortality, which at Carthage would also have been exacerbated by numerous diseases common in other major cities, such as Rome and Pompeii. Our diverse approaches to analyzing the cremated human remains from Carthage strongly support the conclusion that Tophets were cemeteries for those who died shortly before or after birth, regardless of the cause. PMID:20174667

Effect of ancient population structure on the degree of polymorphism shared between modern human populations and ancient hominins.

PubMed

Eriksson, Anders; Manica, Andrea

2012-08-28

Recent comparisons between anatomically modern humans and ancient genomes of other hominins have raised the tantalizing, and hotly debated, possibility of hybridization. Although several tests of hybridization have been devised, they all rely on the degree to which different modern populations share genetic polymorphisms with the ancient genomes of other hominins. However, spatial population structure is expected to generate genetic patterns similar to those that might be attributed to hybridization. To investigate this problem, we take Neanderthals as a case study, and build a spatially explicit model of the shared history of anatomically modern humans and this hominin. We show that the excess polymorphism shared between Eurasians and Neanderthals is compatible with scenarios in which no hybridization occurred, and is strongly linked to the strength of population structure in ancient populations. Thus, we recommend caution in inferring admixture from geographic patterns of shared polymorphisms, and argue that future attempts to investigate ancient hybridization between humans and other hominins should explicitly account for population structure.

Ancient DNA analysis might suggest external origin of individuals from chamber graves placed in medieval cemetery in Pień, Central Poland.

PubMed

Płoszaj, Tomasz; Jędrychowska-Dańska, Krystyna; Zamerska, Alicja; Drozd-Lipińska, Alicja; Poliński, Dariusz; Janowski, Andrzej; Witas, Henryk

2017-12-01

The participation of immigrants during early days in Poland of Piast's dynasty is a debated issue among archaeologists and anthropologists alike. Such hypotheses were formulated on the basis of, amongst others, the discovery of early medieval chamber graves characterized by construction features typical of the Scandinavian culture area. Archaeological and anthropological studies to date have not provided an unequivocal answer as to whether the individuals interred in those graves were autochthons who adopted a different burial rite, or perhaps immigrants from foreign lands. To characterize the gene pool of this population we analyzed the C/T allele of the nuclear gene LCT-13910 as well as fragments of the mitochondrial genome from individuals buried in very richly furnished chamber graves at the medieval cemetery in Pień. The obtained results for the nuclear allele and mtDNA do not corroborate the Scandinavian origin of the analyzed population. Moreover, we did not find haplogroup I, which is the one typical of populations that historically inhabited the north of Europe; and the frequency of the LCT-13910 T allele was similar to that of past and present Polish populations. On the other hand, we identified the atypical haplogroup C5c1, which suggests Asian origin of the studied individuals and confirms our previous reports concerning ancient human migrations from Asia to the territory of present-day Poland. While our findings do not conclusively disprove a Scandinavian lineage of the studied population, they certainly shed some new light on the origin of the individuals buried in chamber graves, which may be very different from the one initially proposed by archaeologists.

Ancient DNA and the rewriting of human history: be sparing with Occam's razor.

PubMed

Haber, Marc; Mezzavilla, Massimo; Xue, Yali; Tyler-Smith, Chris

2016-01-11

Ancient DNA research is revealing a human history far more complex than that inferred from parsimonious models based on modern DNA. Here, we review some of the key events in the peopling of the world in the light of the findings of work on ancient DNA.

Centers of control: Revealing elites among the Ancestral Pueblo during the "Chaco Phenomenon".

PubMed

Harrod, Ryan P

The use of violence as a means of social control among higher status members of the Ancestral Pueblo is explored by using data derived from the burials and the burial context of several sites between AD 850 and 1300. High-status burials, while relatively rare in the archeological record, are of interest because of the role the individuals are assumed to have played in the culture. It has been suggested that there were "elites" among the Ancestral Pueblo during a particularly volatile period that corresponds with the growth, development, and decline of Chacon Canyon and to a lesser extent Aztec Ruins, two major political and ritual centers. Using a bioarchaeological approach that integrates the human remains with the archeological context, burials from Chaco Canyon were compared with burials from other sites in the region based on demographic (age and sex), nutritional (stature), activity (robusticity and entheses), health (pathological conditions), violence (cranial trauma), and cultural (mortuary pattern) patterns. Crucial for expanding our understanding of the role of hierarchy and social control in the Pueblo world, these data suggest that there were high-status individuals who functioned as political and ceremonial leaders. Copyright © 2012 Elsevier Inc. All rights reserved.

Geophysical and botanical monitoring of simulated graves in a tropical rainforest, Colombia, South America

NASA Astrophysics Data System (ADS)

Molina, Carlos Martin; Pringle, Jamie K.; Saumett, Miguel; Evans, Gethin T.

2016-12-01

In most Latin American countries there are significant numbers of missing people and forced disappearances, currently 80,000 only in Colombia. Successful detection of shallow buried human remains by forensic search teams is currently difficult in varying terrain and climates. Within this research we built four simulated clandestine burial styles in tropical rainforests, as this is a common scenario and depositional environment encountered in Latin America, to gain knowledge of optimum forensic geophysics detection techniques. The results of geophysically monitoring these burials using ground penetrating radar, magnetic susceptibility, bulk ground conductivity and electrical resistivity are presented from one to forty three weeks post-burial. Radar survey results with both the 250 MHz and 500 MHz frequency antennae showed good detection of modern simulated burials on 2D profiles and horizontal time slices but poor detection on the other simulated graves. Magnetic susceptibility, bulk ground conductivity and electrical resistivity results were generally poor at detecting the simulated targets. Observations of botanical variations on the test site show rapid regrowth of Malvaceae and Petiveria alliacea vegetation over all burials that are common in these forests, which can make detection more difficult.

31 CFR 560.542 - Importation and exportation of human remains for burial, cremation, or interment authorized.

Code of Federal Regulations, 2012 CFR

2012-07-01

..., as well as of coffins or other receptacles containing such human remains, from Iran is authorized. (b... well as of coffins or other receptacles containing such human remains, to Iran is authorized. (d) This...

Constraining the rate of oceanic deoxygenation leading up to a Cretaceous Oceanic Anoxic Event (OAE-2: ~94 Ma)

PubMed Central

Ostrander, Chadlin M.; Owens, Jeremy D.; Nielsen, Sune G.

2017-01-01

The rates of marine deoxygenation leading to Cretaceous Oceanic Anoxic Events are poorly recognized and constrained. If increases in primary productivity are the primary driver of these episodes, progressive oxygen loss from global waters should predate enhanced carbon burial in underlying sediments—the diagnostic Oceanic Anoxic Event relic. Thallium isotope analysis of organic-rich black shales from Demerara Rise across Oceanic Anoxic Event 2 reveals evidence of expanded sediment-water interface deoxygenation ~43 ± 11 thousand years before the globally recognized carbon cycle perturbation. This evidence for rapid oxygen loss leading to an extreme ancient climatic event has timely implications for the modern ocean, which is already experiencing large-scale deoxygenation. PMID:28808684

Lipid biomarkers for bacterial ecosystems: studies of cultured organisms, hydrothermal environments and ancient sediments

NASA Technical Reports Server (NTRS)

Summons, R. E.; Jahnke, L. L.; Simoneit, B. R.

1996-01-01

This paper forms part of our long-term goal of using molecular structure and carbon isotopic signals preserved as hydrocarbons in ancient sediments to improve understanding of the early evolution of Earth's surface environment. We are particularly concerned with biomarkers which are informative about aerobiosis. Here, we combine bacterial biochemistry with the organic geochemistry of contemporary and ancient hydrothermal ecosystems to construct models for the nature, behaviour and preservation potential of primitive microbial communities. We use a combined molecular and isotopic approach to characterize lipids produced by cultured bacteria and test a variety of culture conditions which affect their biosynthesis. This information is then compared with lipid mixtures isolated from contemporary hot springs and evaluated for the kinds of chemical change that would accompany burial and incorporation into the sedimentary record. In this study we have shown that growth temperature does not appear to alter isotopic fractionation within the lipid classes produced by a methanotropic bacterium. We also found that cultured cyanobacteria biosynthesize diagnostic methylalkanes and dimethylalkanes with the latter only made when growing under low pCO2. In an examination of a microbial mat sample from Octopus Spring, Yellowstone National Park (USA), we could readily identify chemical structures with 13C contents which were diagnostic for the phototrophic organisms such as cyanobacteria and Chloroflexus. We could not, however, find molecular evidence for operation of a methane cycle in the particular mat samples we studied.

Freshly excavated fossil bones are best for amplification of ancient DNA.

PubMed

Pruvost, Mélanie; Schwarz, Reinhard; Correia, Virginia Bessa; Champlot, Sophie; Braguier, Séverine; Morel, Nicolas; Fernandez-Jalvo, Yolanda; Grange, Thierry; Geigl, Eva-Maria

2007-01-16

Despite the enormous potential of analyses of ancient DNA for phylogeographic studies of past populations, the impact these analyses, most of which are performed with fossil samples from natural history museum collections, has been limited to some extent by the inefficient recovery of ancient genetic material. Here we show that the standard storage conditions and/or treatments of fossil bones in these collections can be detrimental to DNA survival. Using a quantitative paleogenetic analysis of 247 herbivore fossil bones up to 50,000 years old and originating from 60 different archeological and paleontological contexts, we demonstrate that freshly excavated and nontreated unwashed bones contain six times more DNA and yield twice as many authentic DNA sequences as bones treated with standard procedures. This effect was even more pronounced with bones from one Neolithic site, where only freshly excavated bones yielded results. Finally, we compared the DNA content in the fossil bones of one animal, a approximately 3,200-year-old aurochs, excavated in two separate seasons 57 years apart. Whereas the washed museum-stored fossil bones did not permit any DNA amplification, all recently excavated bones yielded authentic aurochs sequences. We established that during the 57 years when the aurochs bones were stored in a collection, at least as much amplifiable DNA was lost as during the previous 3,200 years of burial. This result calls for a revision of the postexcavation treatment of fossil bones to better preserve the genetic heritage of past life forms.

Freshly excavated fossil bones are best for amplification of ancient DNA

PubMed Central

Pruvost, Mélanie; Schwarz, Reinhard; Correia, Virginia Bessa; Champlot, Sophie; Braguier, Séverine; Morel, Nicolas; Fernandez-Jalvo, Yolanda; Grange, Thierry; Geigl, Eva-Maria

2007-01-01

Despite the enormous potential of analyses of ancient DNA for phylogeographic studies of past populations, the impact these analyses, most of which are performed with fossil samples from natural history museum collections, has been limited to some extent by the inefficient recovery of ancient genetic material. Here we show that the standard storage conditions and/or treatments of fossil bones in these collections can be detrimental to DNA survival. Using a quantitative paleogenetic analysis of 247 herbivore fossil bones up to 50,000 years old and originating from 60 different archeological and paleontological contexts, we demonstrate that freshly excavated and nontreated unwashed bones contain six times more DNA and yield twice as many authentic DNA sequences as bones treated with standard procedures. This effect was even more pronounced with bones from one Neolithic site, where only freshly excavated bones yielded results. Finally, we compared the DNA content in the fossil bones of one animal, a ≈3,200-year-old aurochs, excavated in two separate seasons 57 years apart. Whereas the washed museum-stored fossil bones did not permit any DNA amplification, all recently excavated bones yielded authentic aurochs sequences. We established that during the 57 years when the aurochs bones were stored in a collection, at least as much amplifiable DNA was lost as during the previous 3,200 years of burial. This result calls for a revision of the postexcavation treatment of fossil bones to better preserve the genetic heritage of past life forms. PMID:17210911

Estimating the number of secondary Ebola cases resulting from an unsafe burial and risk factors for transmission during the West Africa Ebola epidemic

PubMed Central

Dalziel, Benjamin D.; Kagume Njenge, Hilary; Johnson, Ginger; Nugba Ballah, Roselyn; James, Daniel; Wone, Abdoulaye; Bedford, Juliet; McClelland, Amanda

2017-01-01

Background Safely burying Ebola infected individuals is acknowledged to be important for controlling Ebola epidemics and was a major component of the 2013–2016 West Africa Ebola response. Yet, in order to understand the impact of safe burial programs it is necessary to elucidate the role of unsafe burials in sustaining chains of Ebola transmission and how the risk posed by activities surrounding unsafe burials, including care provided at home prior to death, vary with human behavior and geography. Methodology/Principal findings Interviews with next of kin and community members were carried out for unsafe burials in Sierra Leone, Liberia and Guinea, in six districts where the Red Cross was responsible for safe and dignified burials (SDB). Districts were randomly selected from a district-specific sampling frame comprised of villages and neighborhoods that had experienced cases of Ebola. An average of 2.58 secondary cases were potentially generated per unsafe burial and varied by district (range: 0–20). Contact before and after death was reported for 142 (46%) contacts. Caregivers of a primary case were 2.63 to 5.92 times more likely to become EVD infected compared to those with post-mortem contact only. Using these estimates, the Red Cross SDB program potentially averted between 1,411 and 10,452 secondary EVD cases, reducing the epidemic by 4.9% to 36.5%. Conclusions/Significance SDB is a fundamental control measure that limits community transmission of Ebola; however, for those individuals having contact before and after death, it was impossible to ascertain the exposure that caused their infection. The number of infections prevented through SDB is significant, yet greater impact would be achieved by early hospitalization of the primary case during acute illness. PMID:28640823

Micromorphological Aspects of Forensic Geopedology II: Ultramicroscopic vs Microscopic Characterization of Phosphatic Impregnations on Soil Particles in Experimental Burials

NASA Astrophysics Data System (ADS)

Ern, S. I. E.; Trombino, L.; Cattaneo, C.

2012-04-01

Grows up the importance of the role played by soil scientists in the modern forensic sciences, in particular when buried human remains strongly decomposed or skeletonized are found in different environment situations. Among the different techniques normally used in geopedology, it is usefull to apply in such forensic cases, soil micromorphology (including optical microscopy and ultramicroscopy) that has been underused up today, for various kind of reasons. An interdisciplinary Italian-team, formed by earth scientists and legal medicine, is working on several sets of experimental burial of pigs and piglets in different soil types and for different times of burial, in order to get new evidences on environmental behaviour related to the burial, focalising on geopedological and micropedological aspects. The present work is focused on: - ultramicroscopic (SEM-EDS) characterization of the phosphatic impregnation (by body fluids) on soils sampled under the dead bodies of five couples of pigs, buried respectively for one month, six month, one year, two years and two years and half in two different areas; - microscopic (petrographic microscope) and ultramicroscopic (SEM-EDS) cross characterization of the phosphatic impregnation (by body fluids) on soils sampled under the dead bodies of several piglets, buried for twenty months. The first results show trends of persistency of such phosphatic features, mainly related to the grain size of the impregnated soil particles and weather conditions (or seasons) of exhumation, while apparently time since burial is only marginally effective for the investigated burial period. Further experiments are in progress in order to clarify the pathways of phosphorus precipitation and leaching for longer times of burial and different seasons of exhumation, both from the microscopic and the pedological/chemical point of view.

The beginning of metallurgy in the southern Levant: a late 6th millennium CalBC copper awl from Tel Tsaf, Israel.

PubMed

Garfinkel, Yosef; Klimscha, Florian; Shalev, Sariel; Rosenberg, Danny

2014-01-01

The beginning of metallurgy in the ancient Near East attracts much attention. The southern Levant, with the rich assemblage of copper artifacts from the Nahal Mishmar cave and the unique gold rings of the Nahal Qanah cave, is regarded as a main center of early metallurgy during the second half of the 5th millennium CalBC. However, a recently discovered copper awl from a Middle Chalcolithic burial at Tel Tsaf, Jordan Valley, Israel, suggests that cast metal technology was introduced to the region as early as the late 6th millennium CalBC. This paper examines the chemical composition of this item and reviews its context. The results indicate that it was exported from a distant source, probably in the Caucasus, and that the location where it was found is indicative of the social status of the buried individual. This rare finding indicates that metallurgy was first diffused [corrected] to the southern Levant through exchange networks and only centuries later involved local productionThis copper awl, the earliest metal artifact found in the southern Levant, indicates that the elaborate Late Chalcolithic metallurgy developed from a more ancient tradition.

The Beginning of Metallurgy in the Southern Levant: A Late 6th Millennium CalBC Copper Awl from Tel Tsaf, Israel

PubMed Central

Garfinkel, Yosef; Klimscha, Florian; Shalev, Sariel; Rosenberg, Danny

2014-01-01

The beginning of metallurgy in the ancient Near East attracts much attention. The southern Levant, with the rich assemblage of copper artifacts from the Nahal Mishmar cave and the unique gold rings of the Nahal Qanah cave, is regarded as a main center of early metallurgy during the second half of the 5th millennium CalBC. However, a recently discovered copper awl from a Middle Chalcolithic burial at Tel Tsaf, Jordan Valley, Israel, suggests that cast metal technology was introduced to the region as early as the late 6th millennium CalBC. This paper examines the chemical composition of this item and reviews its context. The results indicate that it was exported from a distant source, probably in the Caucasus, and that the location where it was found is indicative of the social status of the buried individual. This rare finding indicates that metallurgy was first defused to the southern Levant through exchange networks and only centuries later involved local production. This copper awl, the earliest metal artifact found in the southern Levant, indicates that the elaborate Late Chalcolithic metallurgy developed from a more ancient tradition. PMID:24671185

Mummification in the Ancient and New World.

PubMed

Rosso, Ana Maria

2014-01-01

In the Ancient and New World there was a custom to preserve the corpse in a natural and artificial way. Since Paleolithic man believed in an afterlife and even in Mesoamerica and the Andes cultures, care and ceremony were practiced to the burial of the dead in an ancestral cult. Mortuary rituals were developed in Pre-dynastic Egypt (4500-3100 BC) but apparently they had begun before in America, c. 5000 BC. Mummies served for assisting the soul to survive and for preventing the dead from frightening the livings. Incas arrived at a point of perfection in these practices after other Andean cultures but we should not forget their older predecessors, the Chinchorro culture on the arid coast of the Atacama Desert. Different steps in the technique can be distinguished in both worlds: natural desiccation covered by animal skins, methods to protect the body skin and flesh removal, replacement with clay; black, red or mud-coated corpses, evisceration, body cavity treatment, cleansing and anointing the interior, brain removal, mummified bodies, corpses covered with natron, before being washed and bandaged or wrapped. It will be necessary to carefully check dates, techniques and periods in the two zones to establish exactly the evolution of the methods applied.

Is atherosclerosis fundamental to human aging? Lessons from ancient mummies.

PubMed

Clarke, Emily M; Thompson, Randall C; Allam, Adel H; Wann, L Samuel; Lombardi, Guido P; Sutherland, M Linda; Sutherland, James D; Cox, Samantha L; Soliman, Muhammad Al-Tohamy; Abd el-Maksoud, Gomaa; Badr, Ibrahem; Miyamoto, Michael I; Frohlich, Bruno; Nur el-din, Abdel-Halim; Stewart, Alexandre F R; Narula, Jagat; Zink, Albert R; Finch, Caleb E; Michalik, David E; Thomas, Gregory S

2014-05-01

Case reports from Johan Czermak, Marc Ruffer, and others a century or more ago demonstrated ancient Egyptians had atherosclerosis three millennia ago. The Horus study team extended their findings, demonstrating that atherosclerosis was prevalent among 76 ancient Egyptian mummies and among 61 mummies from each of the ancient cultures of Peru, the American Southwest, and the Aleutian Islands. These findings challenge the assumption that atherosclerosis is a modern disease caused by present day risk factors. An extensive autopsy of an ancient Egyptian teenage male weaver named Nakht found that he was infected with four parasites: Schistosoma haematobium, Taenia species, Trichinella spiralis, and Plasmodium falciparum. Modern day patients with chronic inflammatory disease such as rheumatoid arthritis, systemic lupus erythematosus, and human immunodeficiency virus experience premature atherosclerosis. Could the burden of chronic inflammatory disease have been a risk factor for atherosclerosis in these ancient cultures? The prevalence of atherosclerosis in four diverse ancient cultures is consistent with atherosclerosis being fundamental to aging. The impact of risk factors in modern times, and potentially in ancient times, suggests a strong gene-environmental interplay: human genes provide a vulnerability to atherosclerosis, the environment determines when and if atherosclerosis becomes manifest clinically. Copyright © 2014 Japanese College of Cardiology. Published by Elsevier Ltd. All rights reserved.

PRESTO low-level waste transport and risk assessment code

DOE Office of Scientific and Technical Information (OSTI.GOV)

Little, C.A.; Fields, D.E.; McDowell-Boyer, L.M.

1981-01-01

PRESTO (Prediction of Radiation Effects from Shallow Trench Operations) is a computer code developed under US Environmental Protection Agency (EPA) funding to evaluate possible health effects from shallow land burial trenches. The model is intended to be generic and to assess radionuclide transport, ensuing exposure, and health impact to a static local population for a 1000-y period following the end of burial operations. Human exposure scenarios considered by the model include normal releases (including leaching and operational spillage), human intrusion, and site farming or reclamation. Pathways and processes of transit from the trench to an individual or population inlude: groundwatermore » transport, overland flow, erosion, surface water dilution, resuspension, atmospheric transport, deposition, inhalation, and ingestion of contaminated beef, milk, crops, and water. Both population doses and individual doses are calculated as well as doses to the intruder and farmer. Cumulative health effects in terms of deaths from cancer are calculated for the population over the thousand-year period using a life-table approach. Data bases are being developed for three extant shallow land burial sites: Barnwell, South Carolina; Beatty, Nevada; and West Valley, New York.« less

Environmental assessment model for shallow land disposal of low-level radioactive wastes

NASA Astrophysics Data System (ADS)

Little, C. A.; Fields, D. E.; Emerson, C. J.; Hiromoto, G.

1981-09-01

The PRESTO (Prediction of Radiation Effects from Shallow Trench Operations) computer code developed to evaluate health effects from shallow land burial trenches is described. This generic model assesses radionuclide transport, ensuing exposure, and health impact to a static local population for a 1000 y period following the end of burial operations. Human exposure scenarios considered include normal releases (including leaching and operational spillage), human intrusion, and site farming or reclamation. Pathways and processes of transit from the trench to an individual or population includes ground water transport overland flow, erosion, surface water dilution, resuspension, atmospheric transport, deposition, inhalation, and ingestion of contaminated beef, milk, crops, and water. Both population doses and individual doses are calculated as well as doses to the intruder and farmer. Cumulative health effects in terms of deaths from cancer are calculated for the population over the 1000 y period using a life table approach. Data bases for three shallow land burial sites (Barnwell, South Carolina, Beatty, Nevada, and West Valley, New York) are under development. The interim model, includes coding for environmental transport through air, surface water, and ground water.

New insights into Eastern Beringian mortuary behavior: A terminal Pleistocene double infant burial at Upward Sun River

PubMed Central

Potter, Ben A.; Irish, Joel D.; Reuther, Joshua D.; McKinney, Holly J.

2014-01-01

Here we report on the discovery of two infant burials dating to ∼11,500 calibrated years (cal) B.P. at the Upward Sun River site in central Alaska. The infants were interred in a pit feature with associated organic and lithic grave goods, including the earliest known North American hafted bifaces with decorated antler foreshafts. Skeletal and dental analyses indicate that Individual 1 died shortly after birth and Individual 2 was a late-term fetus, making these the youngest-aged late Pleistocene individuals known for the Americas and the only known prenate, offering, to our knowledge, the first opportunity to explore mortuary treatment of the youngest members of a terminal Pleistocene North American population. This burial was situated ∼40 cm directly below a cremated 3-y-old child previously discovered in association with a central hearth of a residential feature. The burial and cremation are contemporaneous, and differences in body orientation, treatment, and associated grave goods within a single feature and evidence for residential occupation between burial episodes indicate novel mortuary behaviors. The human remains, grave goods, and associated fauna provide rare direct data on organic technology, economy, seasonality of residential occupations, and infant/child mortality of terminal Pleistocene Beringians. PMID:25385599

Linking craton stability and deep earth processes using thermochronology; a case study in the Superior Province of the Canadian Shield.

NASA Astrophysics Data System (ADS)

Sturrock, C. P.; Flowers, R. M.; Zhong, S.; Metcalf, J. R.; Kohn, B. P.

2017-12-01

Ancient, cratonic continental interiors are often presumed to be stable in the long term, neither accumulating nor shedding significant amounts of overlying sediment. However, recent low-temperature thermochronologic work suggests that such long term stability is an overly simplistic view and that forces besides plate tectonics, such as dynamic topography, may play a significant role. New apatite (U-Th)/He (AHe) and apatite fission track (AFT) data from Archean-Proterozoic basement rocks along a 1400km NW-SE transect in the Superior Province of the Canadian Shield record a spatially variable thermal history for the craton in Paleozoic through the end of Mesozoic time. Dates range from 600­­­­­­±60 Ma (AHe) and 529­±48 Ma (AFT) in the west to 184±14 Ma (AHe) and 174±9 Ma (AFT) in the east. Tectonic activity within the Superior Province ceased by 1.8 Ga, with the latest activity at the margins ending at 1 Ga. Widespread resetting of both AHe and AFT systems post 1 Ga is most likely due to regional scale burial at one or more times since the Cambrian. The temperature sensitivity of the AHe and AFT systems (30-90°C and 60-120°C, respectively) require at least a few km of burial across the craton that has since been stripped away. Preliminary inverse thermal history models, utilizing geologic constraints and radiation damage effects on He diffusion in apatite, indicate significant reheating in the Paleozoic-early Mesozoic (37 to >120°C) and a possible lesser reheating event since the mid Mesozoic (<100°C). Making the simplified assumption of a 25°C/km geothermal gradient and 0°C surface temperature, burial in some areas must have been at least 2-5km in the Paleozoic and was <4km in the Mesozoic. These burial and denudation patterns do not correlate with global sea level changes, making dynamic topography a good candidate for a driving mechanism. New AHe data from kimberlites emplaced in the early to mid-Jurassic will provide an important new constraint on the post-Jurassic thermal history of the Superior Province and result in better temperature/burial estimates for the earlier history. Ongoing work will compare these histories with dynamic topography predictions from geodynamic models back into the Paleozoic.

Stratigraphy and chronology of the WLH 50 human remains, Willandra Lakes World Heritage Area, Australia.

PubMed

Grün, Rainer; Spooner, Nigel; Magee, John; Thorne, Alan; Simpson, John; Yan, Ge; Mortimer, Graham

2011-05-01

We present a detailed description of the geological setting of the burial site of the WLH 50 human remains along with attempts to constrain the age of this important human fossil. Freshwater shells collected at the surface of Unit 3, which is most closely associated with the human remains, and a carbonate sample that encrusted the human bone were analysed. Gamma spectrometry was carried out on the WLH 50 calvaria and TIMS U-series analysis on a small post-cranial bone fragment. OSL dating was applied to a sample from Unit 3 at a level from which the WLH 50 remains may have eroded, as well as from the underlying sediments. Considering the geochemistry of the samples analysed, as well as the possibility of reworking or burial from younger layers, the age of the WLH 50 remains lies between 12.2 ± 1.8 and 32.8 ± 4.6 ka (2-σ errors). Copyright © 2010 Elsevier Ltd. All rights reserved.

Carbon burial and storage in tropical salt marshes under the influence of sea level rise.

PubMed

Ruiz-Fernández, A C; Carnero-Bravo, V; Sanchez-Cabeza, J A; Pérez-Bernal, L H; Amaya-Monterrosa, O A; Bojórquez-Sánchez, S; López-Mendoza, P G; Cardoso-Mohedano, J G; Dunbar, R B; Mucciarone, D A; Marmolejo-Rodríguez, A J

2018-07-15

Coastal vegetated habitats can be important sinks of organic carbon (C org ) and mitigate global warming by sequestering significant quantities of atmospheric CO 2 and storing sedimentary C org for long periods, although their C org burial and storage capacity may be affected by on-going sea level rise and human intervention. Geochemical data from published 210 Pb-dated sediment cores, collected from low-energy microtidal coastal wetlands in El Salvador (Jiquilisco Bay) and in Mexico (Salada Lagoon; Estero de Urias Lagoon; Sian Ka'an Biosphere Reserve) were revisited to assess temporal changes (within the last 100years) of C org concentrations, storage and burial rates in tropical salt marshes under the influence of sea level rise and contrasting anthropization degree. Grain size distribution was used to identify hydrodynamic changes, and δ 13 C to distinguish terrigenous sediments from those accumulated under the influence of marine transgression. Although the accretion rate ranges in all sediment records were comparable, C org concentrations (0.2-30%), stocks (30-465Mgha -1 , by extrapolation to 1m depth), and burial rates (3-378gm -2 year -1 ) varied widely within and among the study areas. However, in most sites sea level rise decreased C org concentrations and stocks in sediments, but increased C org burial rates. Lower C org concentrations were attributed to the input of reworked marine particles, which contribute with a lower amount of C org than terrigenous sediments; whereas higher C org burial rates were driven by higher mass accumulation rates, influenced by increased flooding and human interventions in the surroundings. C org accumulation and long-term preservation in tropical salt marshes can be as high as in mangrove or temperate salt marsh areas and, besides the reduction of C org stocks by ongoing sea level rise, the disturbance of the long-term buried C org inventories might cause high CO 2 releases, for which they must be protected as a part of climate change mitigation efforts. Copyright © 2018 Elsevier B.V. All rights reserved.

Geochemistry of Fine-grained Sediments and Sedimentary Rocks

NASA Astrophysics Data System (ADS)

Sageman, B. B.; Lyons, T. W.

2003-12-01

The nature of detrital sedimentary (siliciclastic) rocks is determined by geological processes that occur in the four main Earth surface environments encountered over the sediment's history from source to final sink: (i) the site of sediment production (provenance), where interactions among bedrock geology, tectonic uplift, and climate control weathering and erosion processes; (ii) the transport path, where the medium of transport, gradient, and distance to the depositional basin may modify the texture and composition of weathered material; (iii) the site of deposition, where a suite of physical, chemical, and biological processes control the nature of sediment accumulation and early burial modification; and (iv) the conditions of later burial, where diagenetic processes may further alter the texture and composition of buried sediments. Many of these geological processes leave characteristic geochemical signatures, making detrital sedimentary rocks one of the most important archives of geochemical data available for reconstructions of ancient Earth surface environments. Although documentation of geochemical data has long been a part of the study of sedimentation (e.g., Twenhofel, 1926, 1950; Pettijohn, 1949; Trask, 1955), the development and application of geochemical methods specific to sedimentary geological problems blossomed in the period following the Second World War ( Degens, 1965; Garrels and Mackenzie, 1971) and culminated in recent years, as reflected by the publication of various texts on marine geochemistry (e.g., Chester, 1990, 2000), biogeochemistry (e.g., Schlesinger, 1991; Libes, 1992), and organic geochemistry (e.g., Tissot and Welte, 1984; Engel and Macko, 1993).Coincident with the growth of these subdisciplines a new focus has emerged in the geological sciences broadly represented under the title of "Earth System Science" (e.g., Kump et al., 1999). Geochemistry has played the central role in this revolution (e.g., Berner, 1980; Garrels and Lerman, 1981; Berner et al., 1983; Kump et al., 2000), with a shifting emphasis toward sophisticated characterization of the linkages among solid Earth, oceans, biosphere, cryosphere, atmosphere, and climate, mediated by short- and long-term biogeochemical cycles. As a result, one of the primary objectives of current geological inquiry is improved understanding of the interconnectedness and associated feedback among the cycles of carbon, nitrogen, phosphorous, oxygen, and sulfur, and their relationship to the history of Earth's climate. This "Earth System" approach involves uniformitarian extrapolations of knowledge gained from modern environments to proxy-based interpretations of environmental change recorded in ancient strata. The strength of modern data lies with direct observations of pathways and products of physical, chemical, and biological processes, but available time-series are short relative to the response times of many of the biogeochemical systems under study. By contrast, stratigraphically constrained geological data offer time-series that encompass a much fuller range of system response. But with the enhanced breadth of temporal resolution and signal amplitude provided by ancient sedimentary records comes a caveat - we must account for the blurring of primary paleo-environmental signals by preservational artifacts and understand that proxy calibrations are extended from the modern world into a nonsubstantively uniformitarian geological past.Fortunately, detrital sedimentary rocks preserve records of multiple proxies (dependent and independent) that illuminate the processes and conditions of sediment formation, transport, deposition, and burial. An integrated multiproxy approach offers an effective tool for deconvolving the history of biogeochemical cycling of, among other things, carbon and sulfur, and for understanding the range of associated paleo-environmental conditions (e.g., levels of atmospheric oxygen and carbon dioxide, oceanic paleoredox, and paleosalinity). Authors of a single chapter can hope, at best, to present a cursory glance at the many biogeochemical proxies currently used and under development in sedimentary studies. Our goal, instead, is to focus on a selected suite of tools of particular value in the reconstruction of paleo-environments preserved in fine-grained siliciclastic sedimentary rocks.Fine-grained, mixed siliciclastic-biogenic sedimentary facies - commonly termed hemipelagic (mainly calcareous or siliceous mudrocks containing preserved organic matter (OM)) - are ideal for unraveling the geological past and are thus the focus of this chapter. These strata accumulate in predominantly low-energy basinal environments where the magnitude (and frequency) of lacunae is diminished, resulting in relatively continuous, though generally condensed sequences. Fortunately, condensation tends to benefit geochemical analysis as it helps to amplify some subtle environmental signals. Because hemipelagic facies include contributions from both terrigenous detrital and pelagic biogenic systems, as well as from authigenic components reflecting the burial environment (Figure 1), they are rich archives of geochemical information. In this chapter we present a conceptual model linking the major processes of detrital, biogenic, and authigenic accumulation in fine-grained hemipelagic settings. This model is intended to be a fresh synthesis of decades of prior research on the geochemistry of modern and ancient mudrocks, including our own work.

Earliest direct evidence of monument building at the archaeological site of Nan Madol (Pohnpei, Micronesia) identified using 230Th/U coral dating and geochemical sourcing of megalithic architectural stone

NASA Astrophysics Data System (ADS)

McCoy, Mark D.; Alderson, Helen A.; Hemi, Richard; Cheng, Hai; Edwards, R. Lawrence

2016-11-01

Archaeologists commonly use the onset of the construction of large burial monuments as a material indicator of a fundamental shift in authority in prehistoric human societies during the Holocene. High- quality direct evidence of this transition is rare. We report new interdisciplinary research at the archaeological site of Nan Madol that allows us to specify where and when people began to construct monumental architecture in the remote islands of the Pacific. Nan Madol is an ancient administrative and mortuary center and the former capital of the island of Pohnpei. It was constructed over 83 ha of lagoon with artificial islets and other architecture built using columnar basalt and coral. We employed geochemical sourcing of basalt used as architectural stone and high-precision uranium-thorium series dates (230Th/U) on coral from the tomb of the first chief of the entire island to identify the beginning of monument building at Nan Madol in AD 1180-1200. Over the next several centuries (AD 1300-1600) monument building began on other islands across Oceania. Future research should be aimed at resolving the causes of these social transformations through higher quality data on monument building.

Insights into Modern Human Prehistory Using Ancient Genomes.

PubMed

Yang, Melinda A; Fu, Qiaomei

2018-03-01

The genetic relationship of past modern humans to today's populations and each other was largely unknown until recently, when advances in ancient DNA sequencing allowed for unprecedented analysis of the genomes of these early people. These ancient genomes reveal new insights into human prehistory not always observed studying present-day populations, including greater details on the genetic diversity, population structure, and gene flow that characterized past human populations, particularly in early Eurasia, as well as increased insight on the relationship between archaic and modern humans. Here, we review genetic studies on ∼45000- to 7500-year-old individuals associated with mainly preagricultural cultures found in Eurasia, the Americas, and Africa. Copyright © 2017 Elsevier Ltd. All rights reserved.

Paleopathological study of hallux valgus.

PubMed

Mays, S A

2005-02-01

Hallux valgus is the abnormal lateral deviation of the great toe. The principal cause is biomechanical, specifically the habitual use of footwear which constricts the toes. In this study, descriptions of the anatomical changes of hallux valgus from published cadaveric and clinical studies were used to generate criteria for identifying the condition in ancient skeletal remains. The value of systematic scoring of hallux valgus in paleopathology is illustrated using two British skeletal series, one dating from the earlier and one from the later Medieval period. It was found that hallux valgus was restricted to later Medieval burials. This appears consistent with archaeological and historical evidence for a rise in popularity, during the late Medieval period (at least among the richer social classes), of narrow, pointed shoes which would have constricted the toes. 2004 Wiley-Liss, Inc.

Pathogens and host immunity in the ancient human oral cavity

PubMed Central

Warinner, Christina; Matias Rodrigues, João F.; Vyas, Rounak; Trachsel, Christian; Shved, Natallia; Grossmann, Jonas; Radini, Anita; Hancock, Y.; Tito, Raul Y.; Fiddyment, Sarah; Speller, Camilla; Hendy, Jessica; Charlton, Sophy; Luder, Hans Ulrich; Salazar-García, Domingo C.; Eppler, Elisabeth; Seiler, Roger; Hansen, Lars; Samaniego Castruita, José Alfredo; Barkow-Oesterreicher, Simon; Teoh, Kai Yik; Kelstrup, Christian; Olsen, Jesper V.; Nanni, Paolo; Kawai, Toshihisa; Willerslev, Eske; von Mering, Christian; Lewis, Cecil M.; Collins, Matthew J.; Gilbert, M. Thomas P.; Rühli, Frank; Cappellini, Enrico

2014-01-01

Calcified dental plaque (dental calculus) preserves for millennia and entraps biomolecules from all domains of life and viruses. We report the first high-resolution taxonomic and protein functional characterization of the ancient oral microbiome and demonstrate that the oral cavity has long served as a reservoir for bacteria implicated in both local and systemic disease. We characterize: (i) the ancient oral microbiome in a diseased state, (ii) 40 opportunistic pathogens, (iii) the first evidence of ancient human-associated putative antibiotic resistance genes, (iv) a genome reconstruction of the periodontal pathogen Tannerella forsythia, (v) 239 bacterial and 43 human proteins, allowing confirmation of a long-term association between host immune factors, “red-complex” pathogens, and periodontal disease, and (vi) DNA sequences matching dietary sources. Directly datable and nearly ubiquitous, dental calculus permits the simultaneous investigation of pathogen activity, host immunity, and diet, thereby extending the direct investigation of common diseases into the human evolutionary past. PMID:24562188

Spiking of contemporary human template DNA with ancient DNA extracts induces mutations under PCR and generates nonauthentic mitochondrial sequences.

PubMed

Pusch, Carsten M; Bachmann, Lutz

2004-05-01

Proof of authenticity is the greatest challenge in palaeogenetic research, and many safeguards have become standard routine in laboratories specialized on ancient DNA research. Here we describe an as-yet unknown source of artifacts that will require special attention in the future. We show that ancient DNA extracts on their own can have an inhibitory and mutagenic effect under PCR. We have spiked PCR reactions including known human test DNA with 14 selected ancient DNA extracts from human and nonhuman sources. We find that the ancient DNA extracts inhibit the amplification of large fragments to different degrees, suggesting that the usual control against contaminations, i.e., the absence of long amplifiable fragments, is not sufficient. But even more important, we find that the extracts induce mutations in a nonrandom fashion. We have amplified a 148-bp stretch of the mitochondrial HVRI from contemporary human template DNA in spiked PCR reactions. Subsequent analysis of 547 sequences from cloned amplicons revealed that the vast majority (76.97%) differed from the correct sequence by single nucleotide substitutions and/or indels. In total, 34 positions of a 103-bp alignment are affected, and most mutations occur repeatedly in independent PCR amplifications. Several of the induced mutations occur at positions that have previously been detected in studies of ancient hominid sequences, including the Neandertal sequences. Our data imply that PCR-induced mutations are likely to be an intrinsic and general problem of PCR amplifications of ancient templates. Therefore, ancient DNA sequences should be considered with caution, at least as long as the molecular basis for the extract-induced mutations is not understood.

Transport of the Pathogenic Prion Protein through Landfill Materials

PubMed Central

Jacobson, Kurt H.; Lee, Seunghak; McKenzie, Debbie; Benson, Craig H.; Pedersen, Joel A.

2009-01-01

Transmissible spongiform encephalopathies (TSEs, prion diseases) are a class of fatal neurodegenerative diseases affecting a variety of mammalian species including humans. A misfolded form of the prion protein (PrPTSE) is the major, if not sole, component of the infectious agent. Recent TSE outbreaks in domesticated and wild animal populations has created the need for safe and effective disposal of large quantities of potentially infected materials. Here, we report the results of a study to evaluate the potential for transport of PrPTSE derived from carcasses and associated wastes in a municipal solid waste (MSW) landfill. Column experiments were conducted to evaluate PrPTSE transport in quartz sand, two fine-textured burial soils currently used in landfill practice, a green waste residual material (a potential burial material), and fresh and aged MSW. PrPTSE was retained by quartz sand and the fine-textured burial soils, with no detectable PrPTSE eluted over more than 40 pore volumes. In contrast, PrPTSE was more mobile in MSW and green waste residual. Transport parameters were estimated from the experimental data and used to model PrPTSE migration in a MSW landfill. To the extent that the PrPTSE used mimics that released from decomposing carcasses, burial of CWD-infected materials at MSW landfills could provide secure containment of PrPTSE provided reasonable burial strategies (e.g., encasement in soil) are used. PMID:19368208

Insights into Ancient Human Populations and their Environment through Stable Isotope Analysis

NASA Astrophysics Data System (ADS)

Macko, S. A.

2011-12-01

Fundamental to the understanding of human history is the ability to make interpretations based on artifacts and other remains which are used to gather information about an ancient population. Sequestered in the organic matrices of these remains can be information concerning incidence of disease, population interactions, genetic defects and diet. Stable isotopes have long been used to interpret diet and trophic interactions in modern ecosystems. We suggest that the isotope compositions of a commonly overlooked material, human hair, is an ideal tool to be used in gleaning information, especially on human diets, about ancient civilizations. Hair can be well-preserved and is amenable to routine measurements of 13C, 15N and 34S isotope analyses and distinguishing sources of nutrition. We have isotopically characterized hair from both modern and ancient individuals. There is a wide diversity in isotope values owing, at least partially, to the levels of seafood, corn-fed animals and other grains in diet. Using these isotope tracers, new information regarding historical figures (George Washington, 1799 AD) to perhaps the most ancient of mummies, the Chinchorro of Chile (more than 7000 BP) as well as the Moche of Peru (1500 BP) and the best preserved mummy, the Neolithic Ice Man of the Oetztaler Alps (5200 BP), have been deciphered. It appears that the often-overlooked hair in archaeological sites represents a significant approach for understanding ancient human communities and their environments, as well as new perspectives on our use of our own modern nutritional sources.

Paleo-oncology: the role of ancient remains in the study of cancer.

PubMed

Halperin, Edward C

2004-01-01

Paleo-oncology is the study of carcinomas and sarcomas in ancient human populations and their hominid precursors. These populations are informative concerning the possible influences on cancer of morphologic and functional evolution, diet, lifestyle, and other environmental factors. The prevalence of cancer in ancient populations might have differed from that in modern humans, because of substantial differences in tobacco and alcohol use, diet, life expectancy, and the availability of treatment. The available physical data concerning cancer in antiquity includes evidence of its existence in animal fossils and ancient humans and their precursors. The difficulties of paleo-oncologic research include a limited soft tissue record. In evaluating cancer in ancient remains, one must also deal with the problem of pseudopathology: whether an observed tissue change is all antemortem pathologic lesion or a postmortem artifact. Future archeological discoveries and the application of improved diagnostic techniques may enable paleo-oncology to make further contributions to our understanding of cancer.

The Restoration and Conservation of Egyptian Alabaster Vessels from the Early ERA in Atfiyah Museum Store - Helwan - Egypt

NASA Astrophysics Data System (ADS)

Radi Abdel Kader, R.; Sayed Mohamed, S.

2013-07-01

Egypt is considered one of the most countries which contain a lot of cultural heritage; the Ancient Egyptian used a lot of stones for his life like: limestone, sandstone, granite and Egyptian Alabaster. The Egyptian Alabaster is used for his daily and eternal life, he made a lot of funerary furniture from this stone like: vessels, statues, Architectural elements in the temples, tombs and canopic jars to preserve his viscera from decomposition like: stomach, liver … etc in the mummification process. Egyptian Alabaster is a sedimentary rock especially chemical- origin sedimentary rocks, it deposits inside caves and around springs which consists of calcium carbonates (CaCO3), they are very fragile "hardness = 3 in Mohs hardness scale". The Egyptian Alabaster vessels expose to a lot of deterioration factors in the burial and exposure environment after excavation. The study case vessels are made of Egyptian alabaster stone and belong to the early era (First and second Egyptian dynasties) in Atfiyah museum store, these vessels exposed to a lot of deterioration factors in the burial and exposure environment like: soil pressure, air temperature variety, relative humidity and salts. The vessels are conserved at the restoration laboratory in Atfiyah museum store by a lot of restoration and conservation processes like: cleaning - consolidation - assembling process for the separated parts and completion for the lost parts.

Human evolution: a tale from ancient genomes

PubMed Central

2017-01-01

The field of human ancient DNA (aDNA) has moved from mitochondrial sequencing that suffered from contamination and provided limited biological insights, to become a fully genomic discipline that is changing our conception of human history. Recent successes include the sequencing of extinct hominins, and true population genomic studies of Bronze Age populations. Among the emerging areas of aDNA research, the analysis of past epigenomes is set to provide more new insights into human adaptation and disease susceptibility through time. Starting as a mere curiosity, ancient human genetics has become a major player in the understanding of our evolutionary history. This article is part of the themed issue ‘Evo-devo in the genomics era, and the origins of morphological diversity’. PMID:27994125

Spatial Variability of Salt Marsh Vertical Accretion and Carbon Burial Rates along the Gulf of Mexico at Local and Regional Scales

NASA Astrophysics Data System (ADS)

Arriola, J.; Cable, J. E.

2017-12-01

Many studies quantifying salt marsh vertical accretion and carbon burial have been conducted along the Gulf of Mexico over the past several decades. These results are often used in conjunction with sea level rise estimates to evaluate the long term storage, and potential release, of carbon as salt marshes are overtaken by rising waters. However, results from these studies are not always comparable because of diverse sampling and analytical methods, which may skew regional averages. In addition, salt marsh vertical accretion and carbon burial rates can be highly variable on local scales depending on sampling locations within the marsh, e.g. levee vs marsh plain, and methods to determine carbon quantity, such as utilizing linear relationships between % organic matter and % carbon from other studies. Anthropogenic impacts on accretion and carbon burial may also influence interpretation of results. Utilizing consistent methods for local and regional marsh research will improve the accuracy of accretion and burial rates which is fundamental to our ability to predict responses to climate change. Our study examined sediment cores extracted from 6 salt marshes - 5 marshes along Texas to Florida coasts and 1 marsh on the Florida Atlantic coast. These marshes were selected for minimal human influence and consistent sampling and analytical methodologies were employed to compare vertical accretion and carbon burial variability on local and regional scales. Total organic carbon (TOC) and total nitrogen were determined via direct measurement and accretion rates were calculated based on 210Pb via 210Po alpha spectrometry. The lowest TOC inventory was found at Mission-Aransas, TX (18.57 g OC), whereas the highest was found at Apalachicola, FL (35.05 g OC). Anahuac, TX, was found to have the highest modern vertical accretion rates of all 6 sites, whereas Guana Tolomato-Matanzas, FL, has the lowest. This research yields regional carbon burial estimates for the Gulf of Mexico using comparable analyses to improve climate change and sea level rise predictions.

Large-Scale Laboratory Experiments of Initiation of Motion and Burial of Objects under Currents and Waves

NASA Astrophysics Data System (ADS)

Landry, B. J.; Wu, H.; Wenzel, S. P.; Gates, S. J.; Fytanidis, D. K.; Garcia, M. H.

2017-12-01

Unexploded ordnances (UXOs) can be found at the bottom of coastal areas as the residue of military wartime activities, training or accidents. These underwater objects are hazards for humans and the coastal environment increasing the need for addressing the knowledge gaps regarding the initiation of motion, fate and transport of UXOs under currents and wave conditions. Extensive experimental analysis was conducted for the initiation of motion of UXOs under various rigid bed roughness conditions (smooth PVC, pitted steel, marbles, gravels and bed of spherical particles) for both unidirectional and oscillatory flows. Particle image velocimetry measurements were conducted under both flow conditions to resolve the flow structure estimate the critical flow conditions for initiation of motion of UXOs. Analysis of the experimental observations shows that the geometrical characteristics of the UXOs, their properties (i.e. volume, mass) and their orientation with respect to the mean flow play an important role on the reorientation and mobility of the examined objects. A novel unified initiation of motion diagram is proposed using an effective/unified hydrodynamic roughness and a new length scale which includes the effect of the projected area and the bed-UXO contact area. Both unidirectional and oscillatory critical flow conditions collapsed into a single dimensionless diagram highlighting the importance and practical applicability of the proposed work. In addition to the rigid bed experiments, the burial dynamics of proud UXOs on a mobile sand bed were also examined. The complex flow-bedform-UXOs interactions were evaluated which highlighted the effect of munition density on burial rate and final burial depth. Burial dynamics and mechanisms for motion were examined for various UXOs types, and results show that, for the case of the low density UXOs under energetic conditions, lateral transport coexists with burial. Prior to burial, UXO re-orientation was also observed depending on the geometric characteristics of the objects.

Palaeoproteomics for human evolution studies

NASA Astrophysics Data System (ADS)

Welker, Frido

2018-06-01

The commonplace sequencing of Neanderthal, Denisovan and ancient modern human DNA continues to revolutionize our understanding of hominin phylogeny and interaction(s). The challenge with older fossils is that the progressive fragmentation of DNA even under optimal conditions, a function of time and temperature, results in ever shorter fragments of DNA. This process continues until no DNA can be sequenced or reliably aligned. Ancient proteins ultimately suffer a similar fate, but are a potential alternative source of biomolecular sequence data to investigate hominin phylogeny given their slower rate of fragmentation. In addition, ancient proteins have been proposed to potentially provide insights into in vivo biological processes and can be used to provide additional ecological information through large scale ZooMS (Zooarchaeology by Mass Spectrometry) screening of unidentifiable bone fragments. However, as initially with ancient DNA, most ancient protein research has focused on Late Pleistocene or Holocene samples from Europe. In addition, only a limited number of studies on hominin remains have been published. Here, an updated review on ancient protein analysis in human evolutionary contexts is given, including the identification of specific knowledge gaps and existing analytical limits, as well as potential avenues to overcome these.

The preservation of ancient solar wind particles buried beneath lunar basalt flows as determined through heat transfer modeling

NASA Astrophysics Data System (ADS)

Rumpf, M. E.; Fagents, S. A.; Crawford, I. A.; Joy, K. H.

2009-12-01

The ever-changing environment on the Earth’s surface has erased any record of the early solar system. However, the antiquity of lunar surface combined with its negligible atmosphere and magnetosphere would have created conditions favorable for the preservation of ancient solar wind particles, galactic cosmic ray particles, and material that originated on other bodies in the inner solar system. Ancient particles emplaced in the regolith and subsequently buried beneath mare lava flows may have been preserved from subsequent bombardment provided the volatiles survived heat introduced by the lava flow. Discovery and extraction of such particles will aid in the advancement of several current solar system exploration goals, including studying the record of solar wind gases and investigating ancient atmospheric compositions on Earth and other inner planets. It has been shown that different volatile species will be released from the regolith when heated to specific temperature ranges between 573 and 973 K. We have developed a finite-volume numerical model that simulates heat transfer between a mare lava flow and the underlying regolith, to predict the preservation potential of ancient particles within layered deposits in the lunar maria. Results show that a 1 m thick basalt flow initially at 1500 K will heat an underlying regolith deposit to release implanted volatile species buried to a depth of 3.7 to 28 cm beneath the regolith surface; pristine samples would be preserved beneath these depths. At the estimated regolith formation rate of ~5 mm/Ma during the peak of mare volcanism (~3.6-3.8 Ga), an exposure time exceeding 7.4 to 56 Ma would be required prior to burial by the ensuing lava flow. Heating depths and required regolith formation times scale in direct proportion to the thickness of the overlying flow. Emplacement of multiple flow units over several hundred Ma would create intercalated stacks of lavas and regolith units, which could be radiometrically dated to provide a time series of the variability in intensity and composition of the solar wind. Suitable locations include Oceanus Procellarum, which contains numerous lava units ranging in age from 3.5-1.2 Ga. Extraction of implanted volatiles of a range of ages would require drilling through perhaps tens of meters of flow units and intervening paleoregoliths, which in turn indicates the need for tens to hundreds of km surface mobility and the provision for adequate sample collection and return. Detection of suitable paleoregolith deposits would be aided by tools such as ground penetrating radar. Although it may be argued that long-range robotic rover and sample return missions could tackle this objective, we propose that the complexity of the task is most readily addressed by a sortie-class human expedition to key sites in the lunar maria.

Assessing Human Diet and Movement in the Tongan Maritime Chiefdom Using Isotopic Analyses

PubMed Central

Stantis, Christina; Kinaston, Rebecca L.; Richards, Michael P.; Davidson, Janet M.; Buckley, Hallie R.

2015-01-01

The rise of stratified societies fundamentally influences the interactions between status, movement, and food. Using isotopic analyses, we assess differences in diet and mobility of individuals excavated from two burial mounds located at the `Atele burial site on Tongatapu, the main island of the Kingdom of Tonga (c. 500 - 150 BP). The first burial mound (To-At-1) was classified by some archaeologists as a commoner’s mound while the second burial mound (To-At-2) was possibly used for interment of the chiefly class. In this study, stable isotope analyses of diet (δ13C, δ15N, and δ34S; n = 41) are used to asses paleodiet and 87Sr/86Sr ratios (n = 30) are analyzed to investigate individual mobility to test whether sex and social status affected these aspects of life. Our results show significant differences in diet between burial mounds and sexes. Those interred in To-At-2 displayed lower δ13C values, indicating they ate relatively more terrestrial plants (likely starchy vegetable staples) compared with To-At-1 individuals. Females displayed significantly lower δ15N values compared with males within the entire assemblage. No differences in δ34S values were observed between sexes or burial mound but it is possible that sea spray or volcanism may have affected these values. One individual displayed the strontium isotopic composition representative of a nonlocal immigrant (outside 2SD of the mean). This suggests the hegemonic control over interisland travel, may have prevented long-term access to the island by non-Tongans exemplifying the political and spiritual importance of the island of Tongatapu in the maritime chiefdom. PMID:25822619

The anomalous esr dating signal intensity observed for human remains from the namu burial site on the island of Taumako, Solomon islands

NASA Astrophysics Data System (ADS)

Dennison, K. J.; Oduwole, A. D.; Sales, K. D.

Bone and tooth specimens taken from human remains ca -100 years old in the Namu burial site. Taumako, Solomon Islands, show intense electron spin resonance (ESR) dating signals that are partially saturated. A comparison with laboratory y-irradiated modern tooth samples suggests that the specimens had received a total dose of ca 20 kGy. Techniques other than ESR spectroscopy indicate that there is a negligible internal radiation dose. A study of the thermal generation of the so-called alanine radical signal in these specimens and in laboratory γ-irradiated modern samples shows that the signal grows at similar rates in both cases. From these data, the Taumako specimens are estimated to have received their radiation dose about 26 years ago.

The Ancient Wood of the Acqualadrone Rostrum: A Materials History Through GC-MS and Sulfur X-ray Absorption Spectroscopy

PubMed Central

Frank, Patrick; Caruso, Francesco; Caponetti, Eugenio

2012-01-01

In 2008 the rostrum from an ancient warship was recovered from the Mediterranean near Acqualadrone, Sicily. To establish its provenance and condition, samples of black and brown rostrum wood were examined using sulfur K-edge x-ray absorption spectroscopy (XAS) and GC-MS. GC-MS of pyrolytic volatiles yielded only guaiacyl derivatives, indicating construction from pinewood. A derivatized extract of black wood yielded forms of abietic acid and sandaracopimaric acid consistent with pine pitch waterproofing. Numerical fits to the sulfur K-edge XAS spectra showed that about 65% of the endogenous sulfur consisted of thiols and disulfides. Elemental sulfur was about 2% and 7% in black and brown wood, respectively, while pyritic sulfur was about 12% and 6%. About 2% of the sulfur in both wood types was modeled as trimethylsulfonium, possibly reflecting biogenic dimethylsulfonio-propionate. High valent sulfur was exclusively represented by sulfate esters, consistent with bacterial sulfotransferase activity. Traces of chloride were detected, but no free sulfate ion. In summary, the rostrum was manufactured of pine wood and subsequently waterproofed with pine pitch. The subsequent 2300 years included battle, foundering, and marine burial followed by anoxia, bacterial colonization, sulfate reduction, and mobilization of transition metals, which produced pyrite and copious appended sulfur functionality. PMID:22545724

Differential diagnosis of an unusual shoulder articular lesion in an ancient domestic dog (Canis lupus familiaris L., 1758).

PubMed

Lawler, D F; Rubin, D A; Evans, R H; Hildebolt, C F; Smith, K E; Widga, C; Martin, T J; Siegel, M; Sackman, J E; Smith, G K; Patel, T K

2013-12-01

A proximal humeral articular surface from an ancient domestic dog deliberate burial was examined during survey of small mammal bones from a prehistoric early Late Woodland archeological site. An unusual lesion on the caudolateral articular surface prompted micro-computed tomography to define detailed structure. Results indicate cortical or immature woven bone arising subchondrally, replacing normal trabeculae, extending through a breach in the cortical surface, and having sharp transition with surrounding normal bone. Organized bone within the lesion indicates that the dog lived for months-to-years following insult. Differential diagnoses initially included: sharp penetrating trauma; intrinsic or extrinsic blunt fracturing force; osteochondrosis or complication of an osteochondral lesion; unusual osteoarthritis; and neoplasia. Computed tomography ruled out normal or unusual osteoarthritis, and neoplasia. The nature and small size of the lesion, relatively small size of the dog, and lack of evidence for complicating infection, suggest against sharp penetrating trauma as a sole cause. The most plausible differential diagnoses include: uncommon fracture-producing force in a companion animal, and blunt intrinsic or extrinsic force causing fracture at a weak point, such as an early osteochondral lesion, that was obliterated by healing. Combined gross examination, micro-computed tomography, and archeological-anthropological influences facilitated refinement of differential diagnosis. Copyright © 2013 Elsevier Inc. All rights reserved.

The First New Zealanders: Patterns of Diet and Mobility Revealed through Isotope Analysis

PubMed Central

Kinaston, Rebecca L.; Walter, Richard K.; Jacomb, Chris; Brooks, Emma; Tayles, Nancy; Halcrow, Sian E.; Stirling, Claudine; Reid, Malcolm; Gray, Andrew R.; Spinks, Jean; Shaw, Ben; Fyfe, Roger; Buckley, Hallie R.

2013-01-01

Direct evidence of the environmental impact of human colonization and subsequent human adaptational responses to new environments is extremely rare anywhere in the world. New Zealand was the last Polynesian island group to be settled by humans, who arrived around the end of the 13th century AD. Little is known about the nature of human adaptation and mobility during the initial phase of colonization. We report the results of the isotopic analysis (carbon, nitrogen and strontium) of the oldest prehistoric skeletons discovered in New Zealand to assess diet and migration patterns. The isotope data show that the culturally distinctive burials, Group 1, had similar diets and childhood origins, supporting the assertion that this group was distinct from Group 2/3 and may have been part of the initial colonizing population at the site. The Group 2/3 individuals displayed highly variable diets and likely lived in different regions of the country before their burial at Wairau Bar, supporting the archaeological evidence that people were highly mobile in New Zealand since the initial phase of human settlement. PMID:23691250

A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome.

PubMed

Warinner, Christina; Speller, Camilla; Collins, Matthew J

2015-01-19

The field of palaeomicrobiology is dramatically expanding thanks to recent advances in high-throughput biomolecular sequencing, which allows unprecedented access to the evolutionary history and ecology of human-associated and environmental microbes. Recently, human dental calculus has been shown to be an abundant, nearly ubiquitous, and long-term reservoir of the ancient oral microbiome, preserving not only microbial and host biomolecules but also dietary and environmental debris. Modern investigations of native human microbiota have demonstrated that the human microbiome plays a central role in health and chronic disease, raising questions about changes in microbial ecology, diversity and function through time. This paper explores the current state of ancient oral microbiome research and discusses successful applications, methodological challenges and future possibilities in elucidating the intimate evolutionary relationship between humans and their microbes.

An investigation into the ancient abortion laws: comparing ancient Persia with ancient Greece and Rome.

PubMed

Yarmohammadi, Hassan; Zargaran, Arman; Vatanpour, Azadeh; Abedini, Ehsan; Adhami, Siamak

2013-01-01

Since the dawn of medicine, medical rights and ethics have always been one of mankind's concerns. In any civilisation, attention paid to medical laws and ethics depends on the progress of human values and the advancement of medical science. The history of various civilisations teaches that each had its own views on medical ethics, but most had something in common. Ancient civilisations such as Greece, Rome, or Assyria did not consider the foetus to be alive and therefore to have human rights. In contrast, ancient Persians valued the foetus as a living person equal to others. Accordingly, they brought laws against abortion, even in cases of sexual abuse. Furthermore, abortion was considered to be a murder and punishments were meted out to the mother, father, and the person performing it.

Human settlement and its influencing factors during the historicalperiod in an oasis-desert transition zone of Dunhuang, Hexi Corridor,northwest China

NASA Astrophysics Data System (ADS)

Li, H.; Dong, G.; Zhang, S.

2017-12-01

Many ancient cities and settlement sites have been found in Lucaogou, an ancient oasis near Dunhuangcity in northwest China. These settlements indicate that humans inhabited this area during the historicalperiod. However, the chronology and subsistence practices of this area remain unclear. Based on newdata from radiocarbon dating, macrobotanical analysis, and the synthesis of historical documents andhigh-resolution paleoclimatic records, we discuss the inter-relationship between human settlements andplant resource utilization strategies at Lucaogou ancient oasis during historical period. Our resultsindicate that these ancient sites in Lucaogou area were built between the Han dynasty (202 BC-AD 220)and the Ming dynasty (AD 1368-AD 1644). People mainly used foxtail millet, broomcorn millet, barleyand three types of wood (Tamarix, Salix, Populus), probably as fuel for cooking. Human settlement intensityin the area during the historical period was primarily influenced by political situations, whichmight also have been affected by fluctuations in precipitation.

How microbial ancient DNA, found in association with human remains, can be interpreted.

PubMed Central

Rollo, F; Marota, I

1999-01-01

The analysis of the DNA of ancient micro-organisms in archaeological and palaeontological human remains can contribute to the understanding of issues as different as the spreading of a new disease, a mummification process or the effect of diets on historical human populations. The quest for this type of DNA, however, can represent a particularly demanding task. This is mainly due to the abundance and diffusion of bacteria, fungi, yeasts, algae and protozoans in the most diverse environments of the present-day biosphere and the resulting difficulty in distinguishing between ancient and modern DNA. Nevertheless, at least under some special circumstances, by using rigorous protocols, which include an archaeometric survey of the specimens and evaluation of the palaeoecological consistency of the results of DNA sequence analysis, glimpses of the composition of the original microbial flora (e.g. colonic flora) can be caught in ancient human remains. Potentials and pitfalls of this research field are illustrated by the results of research works performed on prehistoric, pre-Columbian and Renaissance human mummies. PMID:10091251

A critical review of the German Paleolithic hominin record.

PubMed

Street, Martin; Terberger, Thomas; Orschiedt, Jörg

2006-12-01

We review the hominin fossil record from western Central Europe in light of the recent major revisions of the geochronological context. The mandible from Mauer (Homo heidelbergensis), dated to circa 500,000 years ago, continues to represent the earliest German hominin and may coincide with the occupation of Europe north of the high alpine mountain chains. Only limited new evidence is available for the Middle Pleistocene, mostly in the form of skull fragments, a pattern that may relate to taphonomic processes. These finds and their ages suggest the gradual evolution of a suite of Neandertal features during this period. Despite new finds of classic Neandertals, there is no clear proof for Neandertal burial from Germany. Alternatively, cut marks on a skull fragment from the Neandertal type site suggest special treatment of that individual. New Accelerator Mass Spectrometry (AMS) radiocarbon dates of previous finds leave little reliably dated evidence for anatomically modern humans (AMH) in Europe before 30,000 BP; the remains from Hahnöfersand, Binshof-Speyer, Paderborn-Sande, and Vogelherd are now of Holocene age. Thus, a correlation of AMH with the Aurignacian remains to be proven, and the general idea of a long coexistence of Neandertals and AMH in Europe may be questioned. In western Central Europe, evidence of Gravettian human fossils is also very limited, although a new double grave from lower Austria may be relevant. The only dated burial from the German Upper Paleolithic (from Mittlere Klause) falls into a time period (circa 18,600 BP) represented by only a few occupation sites in western Central Europe. A number of human remains at Magdalenian sites appear to result from variable (secondary) burial practices. In contrast, the Final Paleolithic (circa 12,000-9600 cal. BC) yields an increase of hominin finds, including multiple burials (Bonn-Oberkassel, Neuwied-Irlich), similar to the situation in western and southern Europe.

Ancient typhoid epidemic reveals possible ancestral strain of Salmonella enterica serovar Typhi.

PubMed

Papagrigorakis, Manolis J; Synodinos, Philippos N; Yapijakis, Christos

2007-01-01

In contrast to other serotypes of Salmonella enterica, S. Typhi is exclusively adapted to human hosts. Recently, S. Typhi was identified in ancient skeletal material, thereby incriminating typhoid fever for the Plague of Athens. Since, according to Thucydides' report, animals were also affected by the disease, a working hypothesis is constituted that the causative agent of the Plague might be the anticipated original strain of S. Typhi, purportedly capable of infecting animals as well as humans. Possible future sequencing of the discovered ancient strain of S. Typhi may help towards identifying its genomic differences responsible for its modern specification to humans.

Nuclear magnetic resonance studies of ancient buried wood-I. Observations on the origin of coal to the brown coal stage

USGS Publications Warehouse

Hatcher, P.G.; Breger, I.A.; Earl, W.L.

1981-01-01

Various wood fragments buried in sediments under anaerobic conditions for from 450 yr to approximately 8 Myr have been examined by solid-state 13C nuclear magnetic resonance. Cellulose and other carbohydrates, the major components of Holocene wood, have been shown to be gradually hydrolyzed or otherwise lost under the conditions of burial. Lignin structures, however, are preserved relatively unchanged and become concentrated by difference as the carbohydrates disappear. Thus, a fragment of coalified wood isolated from a Miocene brown coal was found to be still composed of approximately 75% lignin and 25% cellulose. On the basis of our observations, we suggest that coalification of woody tissue progresses directly from lignin to coal and that such coalification may be retarded until most of the cellulose disappears. ?? 1981.

Ancient hepatitis B viruses from the Bronze Age to the Medieval period.

PubMed

Mühlemann, Barbara; Jones, Terry C; Damgaard, Peter de Barros; Allentoft, Morten E; Shevnina, Irina; Logvin, Andrey; Usmanova, Emma; Panyushkina, Irina P; Boldgiv, Bazartseren; Bazartseren, Tsevel; Tashbaeva, Kadicha; Merz, Victor; Lau, Nina; Smrčka, Václav; Voyakin, Dmitry; Kitov, Egor; Epimakhov, Andrey; Pokutta, Dalia; Vicze, Magdolna; Price, T Douglas; Moiseyev, Vyacheslav; Hansen, Anders J; Orlando, Ludovic; Rasmussen, Simon; Sikora, Martin; Vinner, Lasse; Osterhaus, Albert D M E; Smith, Derek J; Glebe, Dieter; Fouchier, Ron A M; Drosten, Christian; Sjögren, Karl-Göran; Kristiansen, Kristian; Willerslev, Eske

2018-05-09

Hepatitis B virus (HBV) is a major cause of human hepatitis. There is considerable uncertainty about the timescale of its evolution and its association with humans. Here we present 12 full or partial ancient HBV genomes that are between approximately 0.8 and 4.5 thousand years old. The ancient sequences group either within or in a sister relationship with extant human or other ape HBV clades. Generally, the genome properties follow those of modern HBV. The root of the HBV tree is projected to between 8.6 and 20.9 thousand years ago, and we estimate a substitution rate of 8.04 × 10 -6 -1.51 × 10 -5 nucleotide substitutions per site per year. In several cases, the geographical locations of the ancient genotypes do not match present-day distributions. Genotypes that today are typical of Africa and Asia, and a subgenotype from India, are shown to have an early Eurasian presence. The geographical and temporal patterns that we observe in ancient and modern HBV genotypes are compatible with well-documented human migrations during the Bronze and Iron Ages 1,2 . We provide evidence for the creation of HBV genotype A via recombination, and for a long-term association of modern HBV genotypes with humans, including the discovery of a human genotype that is now extinct. These data expose a complexity of HBV evolution that is not evident when considering modern sequences alone.

New paleoradiological investigations of ancient human remains from North West Lombardy archaeological excavations.

PubMed

Licata, Marta; Borgo, Melania; Armocida, Giuseppe; Nicosia, Luca; Ferioli, Elena

2016-03-01

Since its birth in 1895, radiology has been used to study ancient mummies. The purpose of this article is to present paleoradiological investigations conducted on several medieval human remains in Varese province. Anthropological (generic identification) and paleopathological analyses were carried out with the support of diagnostic imaging (X-ray and CT scans). Human remains were discovered during excavations of medieval archaeological sites in northwest Lombardy. Classical physical anthropological methods were used for the macroscopic identification of the human remains. X-ray and CT scans were performed on the same scanner (16-layer Hitachi Eclos 16 X-ray equipment). Results Radiological analysis permitted investigating (1) the sex, (2) age of death, (3) type of trauma, (4) therapeutic interventions and (5) osteomas in ancient human remains. In particular, X-ray and CT examinations showed dimorphic facial traits on the mummified skull, and the same radiological approaches allowed determining the age at death from a mummified lower limb. CT analyses allow investigating different types of traumatic lesions in skulls and postcranial skeleton portions and reconstructing the gait and functional outcomes of a fractured femur. Moreover, one case of possible Gardner’s syndrome (GS) was postulated from observing multiple osteomas in an ancient skull. Among the medical tests available to the clinician, radiology is the most appropriate first-line procedure for a diagnostic approach to ancient human remains because it can be performed without causing any significant damage to the specimen.

Ancient human disturbances may be skewing our understanding of Amazonian forests.

PubMed

McMichael, Crystal N H; Matthews-Bird, Frazer; Farfan-Rios, William; Feeley, Kenneth J

2017-01-17

Although the Amazon rainforest houses much of Earth's biodiversity and plays a major role in the global carbon budget, estimates of tree biodiversity originate from fewer than 1,000 forest inventory plots, and estimates of carbon dynamics are derived from fewer than 200 recensus plots. It is well documented that the pre-European inhabitants of Amazonia actively transformed and modified the forest in many regions before their population collapse around 1491 AD; however, the impacts of these ancient disturbances remain entirely unaccounted for in the many highly influential studies using Amazonian forest plots. Here we examine whether Amazonian forest inventory plot locations are spatially biased toward areas with high probability of ancient human impacts. Our analyses reveal that forest inventory plots, and especially forest recensus plots, in all regions of Amazonia are located disproportionately near archaeological evidence and in areas likely to have ancient human impacts. Furthermore, regions of the Amazon that are relatively oversampled with inventory plots also contain the highest values of predicted ancient human impacts. Given the long lifespan of Amazonian trees, many forest inventory and recensus sites may still be recovering from past disturbances, potentially skewing our interpretations of forest dynamics and our understanding of how these forests are responding to global change. Empirical data on the human history of forest inventory sites are crucial for determining how past disturbances affect modern patterns of forest composition and carbon flux in Amazonian forests.

Malaria, a journey in time: in search of the lost myths and forgotten stories.

PubMed

Neghina, Raul; Neghina, Adriana Maria; Marincu, Iosif; Iacobiciu, Ioan

2010-12-01

The saga of malaria parasites precedes the history of humans. Malaria has always been part of the rising and decline of nations, of wars and of upheavals. People of ancient times attributed the malarial manifestations to supernatural influences. Myths about demons responsible for fevers and efforts to bring them under control were often mentioned in ancient articles and attested archaeologically. More than 4 millennia were required until malaria was finally demystified. From the ancient Chinese Canon of Medicine to Ronald Ross' milestone discovery, the humanity struggled to face one of the most debilitating diseases of mankind. This essay assesses the history of malaria from ancient mysteries until it was demystified. Its sections describe the attempts of humans from different times to understand and defeat malaria through supernatural practices, religious rites and medicine, and also their efforts mirrored in art and literary masterpieces.

Ancient genomes from Iceland reveal the making of a human population.

PubMed

Ebenesersdóttir, S Sunna; Sandoval-Velasco, Marcela; Gunnarsdóttir, Ellen D; Jagadeesan, Anuradha; Guðmundsdóttir, Valdís B; Thordardóttir, Elísabet L; Einarsdóttir, Margrét S; Moore, Kristjan H S; Sigurðsson, Ásgeir; Magnúsdóttir, Droplaug N; Jónsson, Hákon; Snorradóttir, Steinunn; Hovig, Eivind; Møller, Pål; Kockum, Ingrid; Olsson, Tomas; Alfredsson, Lars; Hansen, Thomas F; Werge, Thomas; Cavalleri, Gianpiero L; Gilbert, Edmund; Lalueza-Fox, Carles; Walser, Joe W; Kristjánsdóttir, Steinunn; Gopalakrishnan, Shyam; Árnadóttir, Lilja; Magnússon, Ólafur Þ; Gilbert, M Thomas P; Stefánsson, Kári; Helgason, Agnar

2018-06-01

Opportunities to directly study the founding of a human population and its subsequent evolutionary history are rare. Using genome sequence data from 27 ancient Icelanders, we demonstrate that they are a combination of Norse, Gaelic, and admixed individuals. We further show that these ancient Icelanders are markedly more similar to their source populations in Scandinavia and the British-Irish Isles than to contemporary Icelanders, who have been shaped by 1100 years of extensive genetic drift. Finally, we report evidence of unequal contributions from the ancient founders to the contemporary Icelandic gene pool. These results provide detailed insights into the making of a human population that has proven extraordinarily useful for the discovery of genotype-phenotype associations. Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

The study of human Y chromosome variation through ancient DNA.

PubMed

Kivisild, Toomas

2017-05-01

High throughput sequencing methods have completely transformed the study of human Y chromosome variation by offering a genome-scale view on genetic variation retrieved from ancient human remains in context of a growing number of high coverage whole Y chromosome sequence data from living populations from across the world. The ancient Y chromosome sequences are providing us the first exciting glimpses into the past variation of male-specific compartment of the genome and the opportunity to evaluate models based on previously made inferences from patterns of genetic variation in living populations. Analyses of the ancient Y chromosome sequences are challenging not only because of issues generally related to ancient DNA work, such as DNA damage-induced mutations and low content of endogenous DNA in most human remains, but also because of specific properties of the Y chromosome, such as its highly repetitive nature and high homology with the X chromosome. Shotgun sequencing of uniquely mapping regions of the Y chromosomes to sufficiently high coverage is still challenging and costly in poorly preserved samples. To increase the coverage of specific target SNPs capture-based methods have been developed and used in recent years to generate Y chromosome sequence data from hundreds of prehistoric skeletal remains. Besides the prospects of testing directly as how much genetic change in a given time period has accompanied changes in material culture the sequencing of ancient Y chromosomes allows us also to better understand the rate at which mutations accumulate and get fixed over time. This review considers genome-scale evidence on ancient Y chromosome diversity that has recently started to accumulate in geographic areas favourable to DNA preservation. More specifically the review focuses on examples of regional continuity and change of the Y chromosome haplogroups in North Eurasia and in the New World.

A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome

PubMed Central

Warinner, Christina; Speller, Camilla; Collins, Matthew J.

2015-01-01

The field of palaeomicrobiology is dramatically expanding thanks to recent advances in high-throughput biomolecular sequencing, which allows unprecedented access to the evolutionary history and ecology of human-associated and environmental microbes. Recently, human dental calculus has been shown to be an abundant, nearly ubiquitous, and long-term reservoir of the ancient oral microbiome, preserving not only microbial and host biomolecules but also dietary and environmental debris. Modern investigations of native human microbiota have demonstrated that the human microbiome plays a central role in health and chronic disease, raising questions about changes in microbial ecology, diversity and function through time. This paper explores the current state of ancient oral microbiome research and discusses successful applications, methodological challenges and future possibilities in elucidating the intimate evolutionary relationship between humans and their microbes. PMID:25487328

Ancient DNA analysis of dental calculus.

PubMed

Weyrich, Laura S; Dobney, Keith; Cooper, Alan

2015-02-01

Dental calculus (calcified tartar or plaque) is today widespread on modern human teeth around the world. A combination of soft starchy foods, changing acidity of the oral environment, genetic pre-disposition, and the absence of dental hygiene all lead to the build-up of microorganisms and food debris on the tooth crown, which eventually calcifies through a complex process of mineralisation. Millions of oral microbes are trapped and preserved within this mineralised matrix, including pathogens associated with the oral cavity and airways, masticated food debris, and other types of extraneous particles that enter the mouth. As a result, archaeologists and anthropologists are increasingly using ancient human dental calculus to explore broad aspects of past human diet and health. Most recently, high-throughput DNA sequencing of ancient dental calculus has provided valuable insights into the evolution of the oral microbiome and shed new light on the impacts of some of the major biocultural transitions on human health throughout history and prehistory. Here, we provide a brief historical overview of archaeological dental calculus research, and discuss the current approaches to ancient DNA sampling and sequencing. Novel applications of ancient DNA from dental calculus are discussed, highlighting the considerable scope of this new research field for evolutionary biology and modern medicine. Copyright © 2014 Elsevier Ltd. All rights reserved.

Adventitious root production and plastic resource allocation to biomass determine burial tolerance in woody plants from central Canadian coastal dunes.

PubMed

Dech, Jeffery P; Maun, M Anwar

2006-11-01

Burial is a recurrent stress imposed upon plants of coastal dunes. Woody plants are buried on open coastal dunes and in forested areas behind active blowouts; however, little is known about the burial responses and adaptive traits of these species. The objectives of this study were: (a) to determine the growth and morphological responses to burial in sand of seven woody plant species native to central Canadian coastal dunes; and (b) to identify traits that determine burial tolerance in these species. Field experiments were conducted to determine the responses of each species to burial. Saplings were exposed to burial treatments of 0, 10, 25, 50 and 75 % of their height. Burial responses were evaluated based on regressions of total biomass, height, adventitious root production and percentage allocation to shoot, root and adventitious root biomass on percentage burial. Pinus strobus and Picea glauca lacked burial tolerance. In response to the burial gradient, these species showed a strong linear decline in total biomass, minimal adventitious root production that peaked at moderate levels (25-50 % burial) and no change in allocation to shoots vs. roots. The tolerant species Juniperus virginiana, Thuja occidentalis and Picea mariana showed a quadratic response to burial, with little change in biomass up to 50 % burial, but a large decline at 75 %. These species produced abundant adventitious roots up to 50 % burial, but did not alter allocation patterns over the range of burial levels. Populus balsamifera and Salix cordata were stimulated by burial. These species showed linear increases in biomass with increasing burial, produced copious adventitious roots across the gradient and showed a clear shift in allocation to vertical shoot growth and adventitious root production at the expense of the original roots under high burial conditions. Adventitious root production and plastic resource allocation to biomass are adaptive traits of coastal dune woody plants in central Canada, and provide a basis for assessing burial tolerance in woody plants on coastal dunes throughout the world.

Enzymatic laundry for old clothes: immobilized alpha-amylase from Bacillus sp. for the biocleaning of an ancient Coptic tunic.

PubMed

Ferrari, Martina; Mazzoli, Roberto; Morales, Simona; Fedi, Mariaelena; Liccioli, Lucia; Piccirillo, Anna; Cavaleri, Tiziana; Oliva, Cinzia; Gallo, Paolo; Borla, Matilde; Cardinali, Michela; Pessione, Enrica

2017-09-01

The classification and conservation of ancient artworks (belonging to collections) is of important cultural, historical, and economic concern. However, ancient textiles often display structural damage that renders them fragile and unsuitable for exhibition. One of the most common types of damage is linked to erroneous restoration treatments, among which the application of glues to consolidate cuts. Harsh strategies, such as mechanical or chemical treatments, are not suitable since they can cause further impairment of the fabric, whereas mild approaches, like wet cleaning, are often ineffective, as also demonstrated by the present study. Here, we have explored the possibility of using gellan-immobilized enzymes of bacterial origin (Bacillus alpha-amylase) to obtain a satisfactory starch removal from a damaged archaeological tunic-shroud from the Turin Egyptian Museum (Italy), without altering the original yarns or textile fibers. This method, already applied to clean casein-damaged wall paintings, as well as cotton, silk, and linen fabrics, has proved to be optimal for the treatment of a wool burial shroud and to be able to definitively solve fragile textile restoration problems. Moreover, efforts have been made to obtain insights into the artwork: a multidisciplinary approach has allowed to obtain a correct chronological attribution (radiocarbon dating) and fabric fiber characterization (SEM-EDX) as well as shed light on the colored parts and dark stains (FORS+IRFC and XRF). Finally, the evaluation of the type of glue, by Fourier transform infrared spectroscopy, has suggested the best enzyme for glue removal. These results have demonstrated that a mild bio-based approach is a successful tool for the treatment of archaeological textiles in critical conditions.

Combined use of FE-SEM+EDS, ToF-SIMS, XPS, XRD and OM for the study of ancient gilded artefacts

NASA Astrophysics Data System (ADS)

Ingo, G. M.; Riccucci, C.; Pascucci, M.; Messina, E.; Giuliani, C.; Biocca, P.; Tortora, L.; Fierro, G.; Di Carlo, G.

2018-07-01

Gilded brooches dating back to 16th-17th centuries CE were investigated by means of integrated and complementary analytical techniques such as high spatial resolution field emission scanning electron microscopy coupled with energy dispersive X-ray spectrometry (FE-SEM+EDS), time of flight secondary ion mass spectrometry (ToF-SIMS), X-ray photoelectron spectroscopy (XPS), X-ray diffraction (XRD) and optical microscopy (OM). The results reveal in detail the surface and subsurface morphology and the chemical features of the micrometric decorative Au layer that has been deposited by means of the so-called fire-gilding technique based on the use of an amalgam. Moreover, the results allow to recognise chlorine, sulphur and phosphorous species as the main degradation agents and to identify the corrosion products naturally formed during the long-term interaction with the burial soil constituents. The findings show also that the galvanic coupling between the two dissimilar metals, i.e. Cu and Au, lead to enhancement of corrosion phenomena causing the spalling of the gold thin film and the disfigurement of the object. From a conservation point of view, the results suggest a targeted use of low-toxic inhibitors to hinder the detrimental role of chlorine as possible responsible of future further severe degradation phenomena. In conclusions, the micro and nano-chemical, structural and morphological investigations in a depth range from a few nanometers to micrometers have revealed the complex nature of corroded surface of ancient gold coated artefacts, highlighting some specific aspects related to their peculiar degradation mechanisms thus extending the scientific relevance of the tailored use of complementary and integrated surface and subsurface analytical techniques for the investigation of ancient coated artefacts.

Single amino acid radiocarbon dating of Upper Paleolithic modern humans

PubMed Central

Marom, Anat; McCullagh, James S. O.; Higham, Thomas F. G.; Sinitsyn, Andrey A.; Hedges, Robert E. M.

2012-01-01

Archaeological bones are usually dated by radiocarbon measurement of extracted collagen. However, low collagen content, contamination from the burial environment, or museum conservation work, such as addition of glues, preservatives, and fumigants to “protect” archaeological materials, have previously led to inaccurate dates. These inaccuracies in turn frustrate the development of archaeological chronologies and, in the Paleolithic, blur the dating of such key events as the dispersal of anatomically modern humans. Here we describe a method to date hydroxyproline found in collagen (∼10% of collagen carbon) as a bone-specific biomarker that removes impurities, thereby improving dating accuracy and confidence. This method is applied to two important sites in Russia and allows us to report the earliest direct ages for the presence of anatomically modern humans on the Russian Plain. These dates contribute considerably to our understanding of the emergence of the Mid-Upper Paleolithic and the complex suite of burial behaviors that begin to appear during this period. PMID:22517758

Single amino acid radiocarbon dating of Upper Paleolithic modern humans.

PubMed

Marom, Anat; McCullagh, James S O; Higham, Thomas F G; Sinitsyn, Andrey A; Hedges, Robert E M

2012-05-01

Archaeological bones are usually dated by radiocarbon measurement of extracted collagen. However, low collagen content, contamination from the burial environment, or museum conservation work, such as addition of glues, preservatives, and fumigants to "protect" archaeological materials, have previously led to inaccurate dates. These inaccuracies in turn frustrate the development of archaeological chronologies and, in the Paleolithic, blur the dating of such key events as the dispersal of anatomically modern humans. Here we describe a method to date hydroxyproline found in collagen (~10% of collagen carbon) as a bone-specific biomarker that removes impurities, thereby improving dating accuracy and confidence. This method is applied to two important sites in Russia and allows us to report the earliest direct ages for the presence of anatomically modern humans on the Russian Plain. These dates contribute considerably to our understanding of the emergence of the Mid-Upper Paleolithic and the complex suite of burial behaviors that begin to appear during this period.

Joint Estimation of Contamination, Error and Demography for Nuclear DNA from Ancient Humans

PubMed Central

Slatkin, Montgomery

2016-01-01

When sequencing an ancient DNA sample from a hominin fossil, DNA from present-day humans involved in excavation and extraction will be sequenced along with the endogenous material. This type of contamination is problematic for downstream analyses as it will introduce a bias towards the population of the contaminating individual(s). Quantifying the extent of contamination is a crucial step as it allows researchers to account for possible biases that may arise in downstream genetic analyses. Here, we present an MCMC algorithm to co-estimate the contamination rate, sequencing error rate and demographic parameters—including drift times and admixture rates—for an ancient nuclear genome obtained from human remains, when the putative contaminating DNA comes from present-day humans. We assume we have a large panel representing the putative contaminant population (e.g. European, East Asian or African). The method is implemented in a C++ program called ‘Demographic Inference with Contamination and Error’ (DICE). We applied it to simulations and genome data from ancient Neanderthals and modern humans. With reasonable levels of genome sequence coverage (>3X), we find we can recover accurate estimates of all these parameters, even when the contamination rate is as high as 50%. PMID:27049965

Environmental analysis burial of offsite low-level waste at SRP

NASA Astrophysics Data System (ADS)

Poe, W. L.; Moyer, R. A.

1980-12-01

The environmental effects of receipt and burial of low level naval waste are assessed. This low level waste was sent to the NRC-licensed burial ground operated by Chem-Nuclear Systems, Inc., at Barnwell, South Carolina. The DOE announced that DOE-generated low level waste would no longer be buried at commercial waste burial sites. The SRP was selected to receive the Naval waste described in this analysis. Receipt and burial of these wastes will have a negligible effect on SRP's environment and increase only sightly the environmental effects of the SRP operations discussed in the EIS on SRP waste management operations. The environmental effects of burial of this waste at Chem-Nuclear Burial Ground or at the SRP Burial Ground are described in this environmental analysis to permit assessment of incremental effects caused by the decision to bury this Naval waste in the SRP Burial Ground rather than in the Barnwell Burial Ground. The radiological effects from burial of this waste in either the SRP or Chem-Nuclear Burial Ground are very small when compared to those from natural background radiation or to the annual population dose commitment from operation of SRP. The environmental effects of burial at SRP to dose commitments normally received by the population surrounding SRP are compared.

Remembering the Ancients: Observations on Technoscience in Capek's "R.U.R."

ERIC Educational Resources Information Center

Cornell, Christine

2011-01-01

The technoscientific consequences of both the human drives for glory on the one hand and a comfortable life on the other potentially threaten human existence. "R.U.R." (Rossum's Universal Robots), a science fiction play by Karel Capek, bridges ancient writers and contemporary technoscientific endeavors, encouraging individuals to consider these…

A code of ethics for evidence-based research with ancient human remains.

PubMed

Kreissl Lonfat, Bettina M; Kaufmann, Ina Maria; Rühli, Frank

2015-06-01

As clinical research constantly advances and the concept of evolution becomes a strong and influential part of basic medical research, the absence of a discourse that deals with the use of ancient human remains in evidence-based research is becoming unbearable. While topics such as exhibition and excavation of human remains are established ethical fields of discourse, when faced with instrumentalization of ancient human remains for research (i.e., ancient DNA extractions for disease marker analyses) the answers from traditional ethics or even more practical fields of bio-ethics or more specific biomedical ethics are rare to non-existent. The Centre for Evolutionary Medicine at the University of Zurich solved their needs for discursive action through the writing of a self-given code of ethics which was written in dialogue with the researchers at the Institute and was published online in Sept. 2011: http://evolutionäremedizin.ch/coe/. The philosophico-ethical basis for this a code of conduct and ethics and the methods are published in this article. © 2015 Wiley Periodicals, Inc.

Detection and strain typing of ancient Mycobacterium leprae from a medieval leprosy hospital.

PubMed

Taylor, G Michael; Tucker, Katie; Butler, Rachel; Pike, Alistair W G; Lewis, Jamie; Roffey, Simon; Marter, Philip; Lee, Oona Y-C; Wu, Houdini H T; Minnikin, David E; Besra, Gurdyal S; Singh, Pushpendra; Cole, Stewart T; Stewart, Graham R

2013-01-01

Nine burials excavated from the Magdalen Hill Archaeological Research Project (MHARP) in Winchester, UK, showing skeletal signs of lepromatous leprosy (LL) have been studied using a multidisciplinary approach including osteological, geochemical and biomolecular techniques. DNA from Mycobacterium leprae was amplified from all nine skeletons but not from control skeletons devoid of indicative pathology. In several specimens we corroborated the identification of M. leprae with detection of mycolic acids specific to the cell wall of M. leprae and persistent in the skeletal samples. In five cases, the preservation of the material allowed detailed genotyping using single-nucleotide polymorphism (SNP) and multiple locus variable number tandem repeat analysis (MLVA). Three of the five cases proved to be infected with SNP type 3I-1, ancestral to contemporary M. leprae isolates found in southern states of America and likely carried by European migrants. From the remaining two burials we identified, for the first time in the British Isles, the occurrence of SNP type 2F. Stable isotope analysis conducted on tooth enamel taken from two of the type 3I-1 and one of the type 2F remains revealed that all three individuals had probably spent their formative years in the Winchester area. Previously, type 2F has been implicated as the precursor strain that migrated from the Middle East to India and South-East Asia, subsequently evolving to type 1 strains. Thus we show that type 2F had also spread westwards to Britain by the early medieval period.

A burial diagenesis origin for the Ediacaran Shuram-Wonoka carbon isotope anomaly

NASA Astrophysics Data System (ADS)

Derry, Louis A.

2010-05-01

Marked negative δ 13C excursions in Ediacaran-age carbonate sediments have been identified in several sections globally, but are not recognized in all sections of similar age. The presence of δ 13C carb values as low as -12‰ has been interpreted as recording fundamentally different processes in the global carbon cycle than those recognized today. The δ 13C carb anomalies are strongly correlated with δ 18O carb values but are not represented in δ 13C org records. While no primary depositional processes have been identified that can produce the correlated δ 18O-δ 13C arrays, simulations show that fluid-rock interaction with high- pCO 2 fluids is capable of producing such arrays at geologically reasonable pCO 2 and water-rock ratios. Variations in the Mg/Ca ratio and sulfate concentration of the altering fluid determine the extent of dolomite vs. calcite and anhydrite in the resulting mineral assemblage. Incorporation of an initially aragonitic mineralogy demonstrates that high Sr, low Mn/Sr and modest alteration of 87Sr/ 86Sr in ancient carbonates are all compatible with a burial diagenesis mechanism for generation of the δ 13C anomalies, and do not necessarily imply preservation of primary values. The profound Ediacaran negative δ 13C anomalies can be adequately explained by well-understood diagenetic processes, conflated with the difficulty of correlating Precambrian sections independently of chemostratigraphy. They are not a record of primary seawater variations and need not have independent stratigraphic significance.

Detection and Strain Typing of Ancient Mycobacterium leprae from a Medieval Leprosy Hospital

PubMed Central

Taylor, G. Michael; Tucker, Katie; Butler, Rachel; Pike, Alistair W. G.; Lewis, Jamie; Roffey, Simon; Marter, Philip; Lee, Oona Y-C; Wu, Houdini H. T.; Minnikin, David E.; Besra, Gurdyal S.; Singh, Pushpendra; Cole, Stewart T.; Stewart, Graham R.

2013-01-01

Nine burials excavated from the Magdalen Hill Archaeological Research Project (MHARP) in Winchester, UK, showing skeletal signs of lepromatous leprosy (LL) have been studied using a multidisciplinary approach including osteological, geochemical and biomolecular techniques. DNA from Mycobacterium leprae was amplified from all nine skeletons but not from control skeletons devoid of indicative pathology. In several specimens we corroborated the identification of M. leprae with detection of mycolic acids specific to the cell wall of M. leprae and persistent in the skeletal samples. In five cases, the preservation of the material allowed detailed genotyping using single-nucleotide polymorphism (SNP) and multiple locus variable number tandem repeat analysis (MLVA). Three of the five cases proved to be infected with SNP type 3I-1, ancestral to contemporary M. leprae isolates found in southern states of America and likely carried by European migrants. From the remaining two burials we identified, for the first time in the British Isles, the occurrence of SNP type 2F. Stable isotope analysis conducted on tooth enamel taken from two of the type 3I-1 and one of the type 2F remains revealed that all three individuals had probably spent their formative years in the Winchester area. Previously, type 2F has been implicated as the precursor strain that migrated from the Middle East to India and South-East Asia, subsequently evolving to type 1 strains. Thus we show that type 2F had also spread westwards to Britain by the early medieval period. PMID:23638071

Colour Perception in Ancient World

NASA Astrophysics Data System (ADS)

Nesterov, D. I.; Fedorova, M. Yu

2017-11-01

How did the human thought form the surrounding color information into the persistent semantic images of a mythological, pseudoscientific and religious nature? The concepts associated with colour perception are suggested. The existence of colour environment does not depend on the human consciousness. The colour culture formation is directly related to the level of the human consciousness development and the possibility to influence the worldview and culture. The colour perception of a person goes through the stages similar to the development of colour vision in a child. Like any development, the colour consciousness has undergone stages of growth and decline, evolution and stagnation. The way of life and difficult conditions for existence made their own adjustments to the development of the human perception of the surrounding world. Wars have been both a powerful engine of progress in all spheres of life and a great destructive force demolishing the already created and preserved heritage. The surrounding world has always been interesting for humans, evoked images and fantasies in the consciousness of ancient people. Unusual and inexplicable natural phenomena spawned numerous legends and myths which was reflected in the ancient art and architecture and, accordingly, in a certain manifestation of colour in the human society. The colour perception of the ancient man, his pragmatic, utilitarian attitude to colour is considered as well as the influence of dependence on external conditions of existence and their reflection in the colour culture of antiquity. “Natural Science” conducts research in the field of the colour nature and their authorial interpretation of the Hellenic period. Several authorial concepts of the ancient world have been considered.

Ancient human disturbances may be skewing our understanding of Amazonian forests

PubMed Central

McMichael, Crystal N. H.; Matthews-Bird, Frazer; Farfan-Rios, William; Feeley, Kenneth J.

2017-01-01

Although the Amazon rainforest houses much of Earth’s biodiversity and plays a major role in the global carbon budget, estimates of tree biodiversity originate from fewer than 1,000 forest inventory plots, and estimates of carbon dynamics are derived from fewer than 200 recensus plots. It is well documented that the pre-European inhabitants of Amazonia actively transformed and modified the forest in many regions before their population collapse around 1491 AD; however, the impacts of these ancient disturbances remain entirely unaccounted for in the many highly influential studies using Amazonian forest plots. Here we examine whether Amazonian forest inventory plot locations are spatially biased toward areas with high probability of ancient human impacts. Our analyses reveal that forest inventory plots, and especially forest recensus plots, in all regions of Amazonia are located disproportionately near archaeological evidence and in areas likely to have ancient human impacts. Furthermore, regions of the Amazon that are relatively oversampled with inventory plots also contain the highest values of predicted ancient human impacts. Given the long lifespan of Amazonian trees, many forest inventory and recensus sites may still be recovering from past disturbances, potentially skewing our interpretations of forest dynamics and our understanding of how these forests are responding to global change. Empirical data on the human history of forest inventory sites are crucial for determining how past disturbances affect modern patterns of forest composition and carbon flux in Amazonian forests. PMID:28049821

Ancient Humans Influenced the Current Spatial Genetic Structure of Common Walnut Populations in Asia

PubMed Central

Pollegioni, Paola; Woeste, Keith E.; Chiocchini, Francesca; Del Lungo, Stefano; Olimpieri, Irene; Tortolano, Virginia; Clark, Jo; Hemery, Gabriel E.; Mapelli, Sergio; Malvolti, Maria Emilia

2015-01-01

Common walnut (Juglans regia L) is an economically important species cultivated worldwide for its wood and nuts. It is generally accepted that J. regia survived and grew spontaneously in almost completely isolated stands in its Asian native range after the Last Glacial Maximum. Despite its natural geographic isolation, J. regia evolved over many centuries under the influence of human management and exploitation. We evaluated the hypothesis that the current distribution of natural genetic resources of common walnut in Asia is, at least in part, the product of ancient anthropogenic dispersal, human cultural interactions, and afforestation. Genetic analysis combined with ethno-linguistic and historical data indicated that ancient trade routes such as the Persian Royal Road and Silk Road enabled long-distance dispersal of J. regia from Iran and Trans-Caucasus to Central Asia, and from Western to Eastern China. Ancient commerce also disrupted the local spatial genetic structure of autochthonous walnut populations between Tashkent and Samarkand (Central-Eastern Uzbekistan), where the northern and central routes of the Northern Silk Road converged. A significant association between ancient language phyla and the genetic structure of walnut populations is reported even after adjustment for geographic distances that could have affected both walnut gene flow and human commerce over the centuries. Beyond the economic importance of common walnut, our study delineates an alternative approach for understanding how the genetic resources of long-lived perennial tree species may be affected by the interaction of geography and human history. PMID:26332919

Preferential access to genetic information from endogenous hominin ancient DNA and accurate quantitative SNP-typing via SPEX

PubMed Central

Brotherton, Paul; Sanchez, Juan J.; Cooper, Alan; Endicott, Phillip

2010-01-01

The analysis of targeted genetic loci from ancient, forensic and clinical samples is usually built upon polymerase chain reaction (PCR)-generated sequence data. However, many studies have shown that PCR amplification from poor-quality DNA templates can create sequence artefacts at significant levels. With hominin (human and other hominid) samples, the pervasive presence of highly PCR-amplifiable human DNA contaminants in the vast majority of samples can lead to the creation of recombinant hybrids and other non-authentic artefacts. The resulting PCR-generated sequences can then be difficult, if not impossible, to authenticate. In contrast, single primer extension (SPEX)-based approaches can genotype single nucleotide polymorphisms from ancient fragments of DNA as accurately as modern DNA. A single SPEX-type assay can amplify just one of the duplex DNA strands at target loci and generate a multi-fold depth-of-coverage, with non-authentic recombinant hybrids reduced to undetectable levels. Crucially, SPEX-type approaches can preferentially access genetic information from damaged and degraded endogenous ancient DNA templates over modern human DNA contaminants. The development of SPEX-type assays offers the potential for highly accurate, quantitative genotyping from ancient hominin samples. PMID:19864251

Toward estimation of origin of methane at ancient seeps — Carbon isotopes of seep carbonates, lipid biomarkers, and adsorbed gas

NASA Astrophysics Data System (ADS)

Miyajima, Yusuke; Watanabe, Yumiko; Ijiri, Akira; Goto, Akiko; Jenkins, Robert; Hasegawa, Takashi; Sakai, Saburo; Matsumoto, Ryo

2017-04-01

Methane is generated mainly by microbial or thermal degradation of organic matter, and the origin of methane can be estimated based on its stable carbon isotopic signature. Seafloor seepages of methane-charged fluids have been a major source of methane to the ocean, and knowing the origin of methane at the methane seeps can provide valuable insights into the subsurface fluid circulation and biogeochemical processes. Methane seeps in the geological past are archived as authigenic methane-derived carbonate rocks, which precipitate via an alkalinity increase facilitated by microbially mediated anaerobic oxidation of methane. Here we attempted to estimate origins of methane at ancient seeps, based on several proxies preserved within the seep carbonates. We examined methane-seep carbonate rocks in the Japan Sea region, collected from lower Miocene to middle Pleistocene sediments at 11 sites on land, and also carbonate nodules collected from the seafloor off Joetsu, where thermogenic methane is seeping. Carbon isotopic compositions of the carbonates and lipid biomarkers of methane-oxidizing archaea within them were analyzed. In order to directly know original isotopic signatures of methane, we also attempted to extract adsorbed methane through acid dissolution of the powdered carbonates. Early-diagenetic carbonate phases show various δ13C values between -64.7 and -4.7‰ vs. VPDB, suggesting either biogenic or thermogenic, or both origins of methane. A lipid biomarker pentamethylicosane (PMI) extracted from the ancient carbonates has δ13C values mostly lower than -100‰ , whereas that from the modern methane-derived carbonate nodule has a higher value (-80‰ ). The δ13C values of the seeping methane (-36‰ ) and PMI in the modern Joetsu seep carbonate shows an offset of -44‰ . If this carbon isotope offset was similar at the ancient seeps, the δ13C values of PMI indicate that methane at ancient seeps in the Japan Sea region was biogenic in origin, with δ13C values lower than -50‰ . Acid dissolution of the Miocene to Pliocene carbonates released methane with δ13C values mostly around or higher than -50‰ , which conflicts with the estimation based on biomarkers. Moreover, the Pleistocene and modern samples released only trace amounts of methane. It is thus highly possible that the extracted methane was mostly adsorbed on the carbonates within zones of thermogenic generation of hydrocarbons during burial. In conclusion, we can roughly estimate origins of methane at ancient seeps based on δ13C values of carbonates and biomarkers. However, in order to directly analyze methane contained in ancient seepage fluids, exploration of gas or fluid inclusions trapped within carbonate crystals is necessary.

Two contemporaneous mitogenomes from terminal Pleistocene burials in eastern Beringia

PubMed Central

Tackney, Justin C.; Potter, Ben A.; Raff, Jennifer; Powers, Michael; Watkins, W. Scott; Warner, Derek; Reuther, Joshua D.; Irish, Joel D.; O’Rourke, Dennis H.

2015-01-01

Pleistocene residential sites with multiple contemporaneous human burials are extremely rare in the Americas. We report mitochondrial genomic variation in the first multiple mitochondrial genomes from a single prehistoric population: two infant burials (USR1 and USR2) from a common interment at the Upward Sun River Site in central Alaska dating to ∼11,500 cal B.P. Using a targeted capture method and next-generation sequencing, we determined that the USR1 infant possessed variants that define mitochondrial lineage C1b, whereas the USR2 genome falls at the root of lineage B2, allowing us to refine younger coalescence age estimates for these two clades. C1b and B2 are rare to absent in modern populations of northern North America. Documentation of these lineages at this location in the Late Pleistocene provides evidence for the extent of mitochondrial diversity in early Beringian populations, which supports the expectations of the Beringian Standstill Model. PMID:26504230

Ancient wheat species and human health: Biochemical and clinical implications.

PubMed

Dinu, Monica; Whittaker, Anne; Pagliai, Giuditta; Benedettelli, Stefano; Sofi, Francesco

2018-02-01

Wheat is the major staple food in many diets. Based on the increase in worldwide mortality attributable to diet-related chronic diseases, there is an increasing interest in identifying wheat species with greater health potential, more specifically for improved anti-oxidant and anti-inflammatory properties. In particular, ancient varieties (defined as those species that have remained unchanged over the last hundred years) are gaining interest since several studies suggested that they present a healthier nutritional profile than modern wheats. This manuscript reviews the nutritional value and health benefits of ancient wheats varieties, providing a summary of all in vitro, ex vivo, animal and human studies that have thus far been published. Differences in chemical composition, and biochemical and clinical implications of emmer, einkorn, spelt, khorasan and various regional Italian varieties are discussed. Although many studies based on in vitro analyses of grain components provide support to the premise of a healthier nutritional and functional potential of ancient wheat, other in vitro studies performed are not in support of an improved potential of ancient varieties. In the light of existing evidence derived from in vivo experiments, the ancient wheat varieties have shown convincing beneficial effects on various parameters linked to cardio-metabolic diseases such as lipid and glycaemic profiles, as well as the inflammatory and oxidative status. However, given the limited number of human trials, it is not possible to definitively conclude that ancient wheat varieties are superior to all modern counterparts in reducing chronic disease risk. Copyright © 2017 Elsevier Inc. All rights reserved.

Muslim customs surrounding death, bereavement, postmortem examinations, and organ transplants.

PubMed Central

Gatrad, A. R.

1994-01-01

Muslims are always buried, never cremated. It is a religious requirement that the body be ritually washed and draped before burial, which should be as soon as possible after death. Those carrying out this duty should be immunised against hepatitis B and be aware of the hazards of AIDS. Muslim women never attend burials and it is rare for funeral directors to be involved. Muslim jurists from the Arab world can justify organ transplantation, but those from the Indian subcontinent are against it. They are united in the belief of the sacredness of the human body and thus deplore postmortem examinations. Images p522-a PMID:7848419

Organic carbon sequestration in coastal sediments across the Baltic Sea over the last 150 years

NASA Astrophysics Data System (ADS)

Ryves, David; Lewis, Jonathan; Rasmussen, Peter; Weckström, Kaarina; Andrén, Elinor; Clarke, Annemarie; Andersen, Thorbjørn; Yang, Handong; Hietanen, Susanah; Jilbert, Tom; Aigars, Juris; Anderson, N. John

2017-04-01

Coastal areas are extremely vulnerable to impacts from changing marine conditions, which are increasingly being driven by human activity (e.g. nutrient cycling, salinity, hydrography, sea level, climate change). Recent research into the complex and dynamic cycling of carbon in many increasingly nutrient-enriched coastal systems has suggested that they have switched from being net C sources to net C sinks over the last 150 years. This study seeks to explore carbon sequestration rates over the last 150 years from several key regions across the coastal Baltic Sea by synthesising organic carbon (OC) inventories from multiple well-dated sedimentary records from Baltic coasts. Such data will provide insight into long-term coastal change and how terrestrial human impact is influencing the ecology and biogeochemistry of the Baltic Sea. To examine past and present rates of carbon burial in key coastal areas of the Baltic Sea, a synthesis of 30-40 sediment cores from across the Baltic Sea is presented here from Baltic Denmark, Germany, Latvia, western Sweden and southern Finland, and are primarily from near-shore and shallow fjord/estuarine sites. The majority of sites span the last 100-150 years and the majority (>75%) are independently dated using 210Pb. Unsupported 210Pb inventories also allow raw sedimentation rates to be corrected for sediment focussing, permitting regionally reliable estimates of OC accumulation rates to be calculated and provide a plausible basis for upscaling OC accumulation rates within these key regions of the Baltic. Preliminary data analyses suggest a major step-change in system behaviour during the 20th century following low, stable ( 10 g OC m-2 yr-1 focussing corrected, OCFC) rates pre-1900. The initial rise in burial rates occurs early in the 1900s though is punctuated by a slight fall during the 1930s/1940s. After 1950, burial rates dramatically rise (consistently up to 45 g OCFC m-2 yr-1; 4 x pre-1900 rates), a pattern which is repeated across the dataset. Comparison with multiproxy data for these sites and other regional environmental data (including nutrient/pollution records) shows this rapid rise coincides with major changes in algal communities, suggesting fundamental ecosystem change with nutrient loading. Furthermore, these coastal sites also show similar trends to OCFC burial rates in north-western European lakes over the last 150 years, where OCFC burial rates peak in the 1980s before declining as catchment nutrient management strategies have been developed in many countries. This supports the hypothesis that the main driver of coastal eutrophication, primary productivity increase and OC burial is terrestrial nutrient loading (and that most coastal OC is autochthonous rather than allochthonous, terrestrial C), although in the Baltic this is complicated by internal nutrient (especially P) recycling under increasing anoxia and North Sea inflows, and in the northern part, drainage from DOC-rich boreal catchments with low population density and little agriculture.. Finally we also compare our data to offshore, deep water carbon burial rates in the Baltic Sea to assess if OC burial rate estimates for the Baltic Sea region need revising due to under-estimation of the coastal carbon sink.

DNA typing of ancient parasite eggs from environmental samples identifies human and animal worm infections in Viking-age settlement.

PubMed

Søe, Martin Jensen; Nejsum, Peter; Fredensborg, Brian Lund; Kapel, Christian Moliin Outzen

2015-02-01

Ancient parasite eggs were recovered from environmental samples collected at a Viking-age settlement in Viborg, Denmark, dated 1018-1030 A.D. Morphological examination identified Ascaris sp., Trichuris sp., and Fasciola sp. eggs, but size and shape did not allow species identification. By carefully selecting genetic markers, PCR amplification and sequencing of ancient DNA (aDNA) isolates resulted in identification of: the human whipworm, Trichuris trichiura , using SSUrRNA sequence homology; Ascaris sp. with 100% homology to cox1 haplotype 07; and Fasciola hepatica using ITS1 sequence homology. The identification of T. trichiura eggs indicates that human fecal material is present and, hence, that the Ascaris sp. haplotype 07 was most likely a human variant in Viking-age Denmark. The location of the F. hepatica finding suggests that sheep or cattle are the most likely hosts. Further, we sequenced the Ascaris sp. 18S rRNA gene in recent isolates from humans and pigs of global distribution and show that this is not a suited marker for species-specific identification. Finally, we discuss ancient parasitism in Denmark and the implementation of aDNA analysis methods in paleoparasitological studies. We argue that when employing species-specific identification, soil samples offer excellent opportunities for studies of human parasite infections and of human and animal interactions of the past.

The journey of discovering skull base anatomy in ancient Egypt and the special influence of Alexandria.

PubMed

Elhadi, Ali M; Kalb, Samuel; Perez-Orribo, Luis; Little, Andrew S; Spetzler, Robert F; Preul, Mark C

2012-08-01

The field of anatomy, one of the most ancient sciences, first evolved in Egypt. From the Early Dynastic Period (3100 BC) until the time of Galen at the end of the 2nd century ad, Egypt was the center of anatomical knowledge, including neuroanatomy. Knowledge of neuroanatomy first became important so that sacred rituals could be performed by ancient Egyptian embalmers during mummification procedures. Later, neuroanatomy became a science to be studied by wise men at the ancient temple of Memphis. As religious conflicts developed, the study of the human body became restricted. Myths started to replace scientific research, squelching further exploration of the human body until Alexander the Great founded the city of Alexandria. This period witnessed a revolution in the study of anatomy and functional anatomy. Herophilus of Chalcedon, Erasistratus of Chios, Rufus of Ephesus, and Galen of Pergamon were prominent physicians who studied at the medical school of Alexandria and contributed greatly to knowledge about the anatomy of the skull base. After the Royal Library of Alexandria was burned and laws were passed prohibiting human dissections based on religious and cultural factors, knowledge of human skull base anatomy plateaued for almost 1500 years. In this article the authors consider the beginning of this journey, from the earliest descriptions of skull base anatomy to the establishment of basic skull base anatomy in ancient Egypt.

Human beta-globin gene polymorphisms characterized in DNA extracted from ancient bones 12,000 years old.

PubMed

Béraud-Colomb, E; Roubin, R; Martin, J; Maroc, N; Gardeisen, A; Trabuchet, G; Goosséns, M

1995-12-01

Analyzing the nuclear DNA from ancient human bones is an essential step to the understanding of genetic diversity in current populations, provided that such systematic studies are experimentally feasible. This article reports the successful extraction and amplification of nuclear DNA from the beta-globin region from 5 of 10 bone specimens up to 12,000 years old. These have been typed for beta-globin frameworks by sequencing through two variable positions and for a polymorphic (AT) chi (T) gamma microsatellite 500 bp upstream of the beta-globin gene. These specimens of human remains are somewhat older than those analyzed in previous nuclear gene sequencing reports and considerably older than those used to study high-copy-number human mtDNA. These results show that the systematic study of nuclear DNA polymorphisms of ancient populations is feasible.

Effects of sand burial on the survival and growth of two shrubs dominant in different habitats of northern China.

PubMed

Qu, Hao; Zhao, Ha-Lin; Zhao, Xue-Yong; Zuo, Xiao-An; Wang, Shao-Kun; Chen, Min

2017-04-01

Plants that grow in dune ecosystems always suffer from sand burial. Shrubs play implications on the healthy functioning of dune ecosystems due to control blowing sand. However, the survival and growth responses of shrubs to sand burial remain poorly understood. The survival rate and seedling height of two shrubs (Artemisia halodendron and Lespedeza davurica) along with the soil properties under different burial depths were examined in order to reveal the causing ecophysiological attributes of sand burial on shrubs in the desertified region. It was found that A. halodendron can survive a burial depth of 6 cm greater than its seedling height, which is a dominant shrub in mobile dunes with intense burial, whereas a burial depth equivalent to three fourths of its seedling height is detrimental to L. davurica, which is dominant in fixed dunes with less burial. The reasons for the shrub death under sand burial were associated with the physical barrier to vertical growth and the reduction in photosynthetic area. In conclusion, A. halodendron can facilitate the stabilization of mobile dunes because of their high tolerance to the frequent and intensive sand burial, while L. davurica can be beneficial for the recovery process because of their higher survival rates under shallow burial following restoration of mobile dunes.

Synchrotron X-ray micro-beam studies of ancient Egyptian make-up

NASA Astrophysics Data System (ADS)

Martinetto, P.; Anne, M.; Dooryhée, E.; Drakopoulos, M.; Dubus, M.; Salomon, J.; Simionovici, A.; Walter, Ph.

2001-07-01

Vases full of make-up are most often present in the burial furniture of Egyptian tombs dated from the pharaonic period. The powdered cosmetics made of isolated grains are analysed to identify their trace element signature. From this signature we identify the provenance of the mineral ingredients in the make-up and we observe different impurities in products, which have been demonstrated as synthetic substances by previous works. Focused X-ray micro-beam ( 2×5 μm2) is successively tuned at 11 keV, below the L III absorption edge of Pb, and 31.8 keV for global characterisation of the metal impurities. The fluorescence signal integrated over each single grain is detected against the X-ray micro-diffraction pattern collected in transmission with a bi-dimensional detector. Furthermore, for galena grains rich in Zn, the XANES signal at the K-absorption edge of Zn shows its immediate nearest-neighbour environment.

Phytochemical and genetic analyses of ancient cannabis from Central Asia

PubMed Central

Russo, Ethan B.; Jiang, Hong-En; Li, Xiao; Sutton, Alan; Carboni, Andrea; del Bianco, Francesca; Mandolino, Giuseppe; Potter, David J.; Zhao, You-Xing; Bera, Subir; Zhang, Yong-Bing; Lü, En-Guo; Ferguson, David K.; Hueber, Francis; Zhao, Liang-Cheng; Liu, Chang-Jiang; Wang, Yu-Fei; Li, Cheng-Sen

2008-01-01

The Yanghai Tombs near Turpan, Xinjiang-Uighur Autonomous Region, China have recently been excavated to reveal the 2700-year-old grave of a Caucasoid shaman whose accoutrements included a large cache of cannabis, superbly preserved by climatic and burial conditions. A multidisciplinary international team demonstrated through botanical examination, phytochemical investigation, and genetic deoxyribonucleic acid analysis by polymerase chain reaction that this material contained tetrahydrocannabinol, the psychoactive component of cannabis, its oxidative degradation product, cannabinol, other metabolites, and its synthetic enzyme, tetrahydrocannabinolic acid synthase, as well as a novel genetic variant with two single nucleotide polymorphisms. The cannabis was presumably employed by this culture as a medicinal or psychoactive agent, or an aid to divination. To our knowledge, these investigations provide the oldest documentation of cannabis as a pharmacologically active agent, and contribute to the medical and archaeological record of this pre-Silk Road culture. PMID:19036842

Ashes to ashes, dust to dust: geochemical signals of mortuary areas

NASA Astrophysics Data System (ADS)

Smejda, Ladislav; Horak, Jan; Alexandrova, Jana; Hejcman, Michal

2017-04-01

Mortuary areas are important components of historic landscapes. We address the intriguing problem of human-induced chemical change in sediments and soils affected by burial of the deceased. While the decomposition of dead bodies may be seen as a very natural process, cultural customs of most human societies often dictate the establishment of formal mortuary areas where human remains accumulate for decades and centuries. Abandoned cemeteries and other places associated with the dead then turn into other land-use categories (e.g. arable fields, forests, parks, residential areas etc.). What is the long-term ecological legacy of former places of intensive burial has been little studied so far. Phosphate analysis is the most frequently applied method for geoarchaeological detection of past human impact on soils. It has been used also in research aimed at human graves. To overcome the inherent limits of this method, we focus mainly on a multi-elemental analysis of necrosols based on X-ray fluorescence spectroscopy (XRF). In this presentation, we discuss selected observations made in typologically and chronologically distinct localities, covering a spectrum of burial customs practiced since prehistory to the recent period, namely inhumation, cremation, and (through animal proxies) also excarnation. We aim to show that mortuary areas are quite specific and complex class of sedimentary archive. Chemical signals of decomposed human remains can frequently be well distinguished against the natural background values, which means they may remain persistent for a very long time (in timescale of centuries to millennia). From an ecological point of view, mortuary sites (even abandoned ones) represent landscape patches significantly enriched with various nutrients compared to the surrounding region, with necessary impact on local biota. This emergent research area produces knowledge that can be utilised in ecology, soil science, and landscape management. Serious problems must however be tackled to fully embrace its potential; from ethical concerns towards human remains to methodological aspects of various taphonomic and diagenetic effects on measured data. The work presented in this paper has been partially funded by the project DEEPDEAD: Artefacts and human bodies in socio-cultural transformations (HERA.15.055).

The significance of petroleum bitumen in ancient Egyptian mummies

PubMed Central

Clark, K. A.; Ikram, S.

2016-01-01

Mummification was practised in ancient Egypt for more than 3000 years, emerging from initial observations of buried bodies preserved by natural desiccation. The use of organic balms (and other funerary practices) was a later introduction necessitated by more humid burial environments, especially tombs. The dark colour of many mummies led to the assumption that petroleum bitumen (or natural asphalt) was ubiquitous in mummification; however, this has been questioned for more than 100 years. We test this by investigating 91 materials comprising balms, tissues and textiles from 39 mummies dating from ca 3200 BC to AD 395. Targeted petroleum bitumen biomarker (steranes and hopanes) analyses by gas chromatography-mass spectrometry selected ion monitoring (GC-MS SIM, m/z 217 and 191) showed no detectable bitumen use before the New Kingdom (ca 1550–1070 BC). However, bitumen was used in 50% of New Kingdom to Late Period mummies, rising to 87% of Ptolemaic/Roman Period mummies. Quantitative determinations using 14C analyses reveal that even at peak use balms were never more than 45% w/w bitumen. Critically, the dark colour of balms can be simulated by heating/ageing mixtures of fats, resins and beeswax known to be used in balms. The application of black/dark brown balms to bodies was deliberate after the New Kingdom reflecting changing funerary beliefs and shifts in religious ideology. This article is part of the themed issue ‘Quantitative mass spectrometry’. PMID:27644983

The significance of petroleum bitumen in ancient Egyptian mummies.

PubMed

Clark, K A; Ikram, S; Evershed, R P

2016-10-28

Mummification was practised in ancient Egypt for more than 3000 years, emerging from initial observations of buried bodies preserved by natural desiccation. The use of organic balms (and other funerary practices) was a later introduction necessitated by more humid burial environments, especially tombs. The dark colour of many mummies led to the assumption that petroleum bitumen (or natural asphalt) was ubiquitous in mummification; however, this has been questioned for more than 100 years. We test this by investigating 91 materials comprising balms, tissues and textiles from 39 mummies dating from ca 3200 BC to AD 395. Targeted petroleum bitumen biomarker (steranes and hopanes) analyses by gas chromatography-mass spectrometry selected ion monitoring (GC-MS SIM, m/z 217 and 191) showed no detectable bitumen use before the New Kingdom (ca 1550-1070 BC). However, bitumen was used in 50% of New Kingdom to Late Period mummies, rising to 87% of Ptolemaic/Roman Period mummies. Quantitative determinations using (14)C analyses reveal that even at peak use balms were never more than 45% w/w bitumen. Critically, the dark colour of balms can be simulated by heating/ageing mixtures of fats, resins and beeswax known to be used in balms. The application of black/dark brown balms to bodies was deliberate after the New Kingdom reflecting changing funerary beliefs and shifts in religious ideology.This article is part of the themed issue 'Quantitative mass spectrometry'. © 2016 The Authors.

Organic carbon burial in global lakes and reservoirs

USGS Publications Warehouse

Mendonça, Raquel; Müller, Roger A.; Clow, David W.; Verpoorter, Charles; Raymond, Peter; Tranvik, Lars; Sobek, Sebastian

2017-01-01

Burial in sediments removes organic carbon (OC) from the short-term biosphere-atmosphere carbon (C) cycle, and therefore prevents greenhouse gas production in natural systems. Although OC burial in lakes and reservoirs is faster than in the ocean, the magnitude of inland water OC burial is not well constrained. Here we generate the first global-scale and regionally resolved estimate of modern OC burial in lakes and reservoirs, deriving from a comprehensive compilation of literature data. We coupled statistical models to inland water area inventories to estimate a yearly OC burial of 0.15 (range, 0.06–0.25) Pg C, of which ~40% is stored in reservoirs. Relatively higher OC burial rates are predicted for warm and dry regions. While we report lower burial than previously estimated, lake and reservoir OC burial corresponded to ~20% of their C emissions, making them an important C sink that is likely to increase with eutrophication and river damming.

Large increases in carbon burial in northern lakes during the Anthropocene

NASA Astrophysics Data System (ADS)

Heathcote, Adam J.; Anderson, N. John; Prairie, Yves T.; Engstrom, Daniel R.; Del Giorgio, Paul A.

2015-11-01

Northern forests are important ecosystems for carbon (C) cycling and lakes within them process and bury large amounts of organic-C. Current burial estimates are poorly constrained and may discount other shifts in organic-C burial driven by global change. Here we analyse a suite of northern lakes to determine trends in organic-C burial throughout the Anthropocene. We found burial rates increased significantly over the last century and are up to five times greater than previous estimates. Despite a correlation with temperature, warming alone did not explain the increase in burial, suggesting the importance of other drivers including atmospherically deposited reactive nitrogen. Upscaling mean lake burial rates for each time period to global northern forests yields up to 4.5 Pg C accumulated in the last 100 years--20% of the total burial over the Holocene. Our results indicate that lakes will become increasingly important for C burial under future global change scenarios.

Infectious Agents As Markers of Human Migration toward the Amazon Region of Brazil

PubMed Central

Ishak, Ricardo; Machado, Luiz F. A.; Cayres-Vallinoto, Izaura; Guimarães Ishak, Marluísa de O.; Vallinoto, Antonio C. R.

2017-01-01

Infectious agents are common companions of humans and since ancient times they follow human migration on their search for a better place to live. The study of paleomicrobiology was significantly improved in its accuracy of measurement with the constant development of better methods to detect and analyze nucleic acids. Human tissues are constantly used to trace ancient infections and the association of anthropological evidences are important to confirm the microbiological information. Infectious agents which establish human persistent infections are particularly useful to trace human migrations. In the present article, the evidence of infection by viral agents such as human T-lymphotropic virus 1, human T-lymphotropic virus 2, human herpes virus-8, JC virus, and a bacterium, Chlamydia trachomatis, was described using different methodologies for their detection. Their presence was further used as biomarkers associated with anthropological and other relevant information to trace human migration into the Amazon region of Brazil. The approach also evidenced their microbiological origin, emergence, evolution, and spreading. The information obtained confirms much of the archeological information available tracing ancient and more recent human migration into this particular geographical region. In this article, the paleomicrobiological information on the subject was summarized and reviewed. PMID:28912770

Gold coated copper artifacts from the Royal Tombs of Sipán (Huaca Rajada, Perù): manufacturing techniques and corrosion phenomena

NASA Astrophysics Data System (ADS)

Ingo, Gabriel M.; Bustamante, Angel D.; Alva, Walter; Angelini, Emma; Cesareo, Roberto; Gigante, Giovanni E.; Zambrano, Sandra Del Pilar A.; Riccucci, Cristina; Di Carlo, Gabriella; Parisi, Erica I.; Faraldi, Federica; Chero, Luis; Fabian, Julio S.

2013-12-01

Twenty five years ago, close to the northern Peruvian town of Lambayeque (Huaca Rajada) beneath two large and eroded pyramids, built of adobe mud bricks, Professor Alva discovered the world-famous unlooted pre-Columbian burial chambers of the Royal Tombs of Sipan. The tombs contained a large amount of objects of exceptional artistic and historical value including the greatest intact number of gold and silver artefacts in the Americas to be considered one of the most important archaeological discoveries of the last century. Some copper based objects coated with thin layers of gold have been studied by means of the combined use of analytical techniques such as optical microscopy (OM), scanning electron microscopy coupled with energy dispersive X-ray micro-analysis (SEM-EDS), X-ray photoelectron spectroscopy (XPS), and X-ray diffraction (XRD) in order to identify the chemical composition and the manufacturing processes of the gold layer as well as the corrosion products formed during the long-term burial. The micro-chemical and structural results give useful information about the manufacturing techniques used by the Moche metalsmiths to modify the surface chemical composition of the coated artefacts likely based on the depletion gilding process carried out by oxidising the surface copper containing the noble metal and etching away the copper oxides. Furthermore, the results reveal that the main degradation agent is the ubiquitous chlorine and that copper has been almost completely transformed during the burial into mineral species giving rise to the formation of stratified structures constituted by different mineral phases such as cuprous oxide (Cu2O) and copper carbonates [azurite (Cu3(CO3)2(OH)2 and malachite (CuCO3Cu(OH)2)] as well as dangerous chlorine-based compounds such as nantokite (CuCl) and atacamite (Cu2(OH)3Cl) polymorphs. These information evidence the strict interaction of the alloying elements with the soil components as well as the occurrence of the copper cyclic corrosion as post-burial degradation phenomenon. The present study confirms that the combined use of micro-chemical and micro-structural investigation techniques such as SEM-EDS, XPS, XRD, and OM can be successfully used to investigate the technological manufacturing processes of the ancient coated artefacts and to achieve information about degradation agents and mechanisms useful to define tailored conservation strategies possibly including new, more reliable, and safer materials.

Reconstructing the history of a fragmented and heavily exploited red deer population using ancient and contemporary DNA.

PubMed

Rosvold, Jørgen; Røed, Knut H; Hufthammer, Anne Karin; Andersen, Reidar; Stenøien, Hans K

2012-09-26

Red deer (Cervus elaphus) have been an important human resource for millennia, experiencing intensive human influence through habitat alterations, hunting and translocation of animals. In this study we investigate a time series of ancient and contemporary DNA from Norwegian red deer spanning about 7,000 years. Our main aim was to investigate how increasing agricultural land use, hunting pressure and possibly human mediated translocation of animals have affected the genetic diversity on a long-term scale. We obtained mtDNA (D-loop) sequences from 73 ancient specimens. These show higher genetic diversity in ancient compared to extant samples, with the highest diversity preceding the onset of agricultural intensification in the Early Iron Age. Using standard diversity indices, Bayesian skyline plot and approximate Bayesian computation, we detected a population reduction which was more prolonged than, but not as severe as, historic documents indicate. There are signs of substantial changes in haplotype frequencies primarily due to loss of haplotypes through genetic drift. There is no indication of human mediated translocations into the Norwegian population. All the Norwegian sequences show a western European origin, from which the Norwegian lineage diverged approximately 15,000 years ago. Our results provide direct insight into the effects of increasing habitat fragmentation and human hunting pressure on genetic diversity and structure of red deer populations. They also shed light on the northward post-glacial colonisation process of red deer in Europe and suggest increased precision in inferring past demographic events when including both ancient and contemporary DNA.

38 CFR 3.1610 - Burial in national cemeteries; burial of unclaimed bodies.

Code of Federal Regulations, 2011 CFR

2011-07-01

... cemeteries; burial of unclaimed bodies. 3.1610 Section 3.1610 Pensions, Bonuses, and Veterans' Relief... unclaimed bodies. The statutory burial allowance and permissible transportation charges as provided in §§ 3... from the officers having jurisdiction over burials in national cemeteries; or (b) Where the body of a...

20 CFR 416.1231 - Burial spaces and certain funds set aside for burial expenses.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 20 Employees' Benefits 2 2014-04-01 2014-04-01 false Burial spaces and certain funds set aside for burial expenses. 416.1231 Section 416.1231 Employees' Benefits SOCIAL SECURITY ADMINISTRATION SUPPLEMENTAL SECURITY INCOME FOR THE AGED, BLIND, AND DISABLED Resources and Exclusions § 416.1231 Burial...

38 CFR 3.1610 - Burial in national cemeteries; burial of unclaimed bodies.

Code of Federal Regulations, 2010 CFR

2010-07-01

... cemeteries; burial of unclaimed bodies. 3.1610 Section 3.1610 Pensions, Bonuses, and Veterans' Relief... unclaimed bodies. The statutory burial allowance and permissible transportation charges as provided in §§ 3... from the officers having jurisdiction over burials in national cemeteries; or (b) Where the body of a...

Sexual life in Pharaonic Egypt: towards a urological view.

PubMed

Shokeir, A A; Hussein, M I

2004-10-01

Sex is a basic human need, common to all people at all times. It is evident that the ancient Egyptians were real human beings, not only a people who built massive pyramids and made mummies of their dead. The ancient Egyptians had a rich and varied sexual life, which they found an opportunity to describe in words and pictures. As in the other early primitive civilizations, erotic matters were of prime importance and became an integral part of life. In Pharaonic times, the Egyptians described impotence and recorded several methods to increase the sexual power. In the present paper, we will shed light on some aspects of the sexual life in ancient Egypt that may be interesting to the urologists, including ancient Egyptian concepts of sex and erotic matters, their own way of treatment of impotence and Min, the Egyptian fertility God.

Effects of sediment burial on tropical ruderal seagrasses are moderated by clonal integration

NASA Astrophysics Data System (ADS)

Ooi, Jillian Lean Sim; Kendrick, Gary A.; Van Niel, Kimberly P.

2011-12-01

Seagrasses are clonal plants that grow submerged in dynamic sedimentary environments where burial is a common occurrence. Clonal organisms may respond to burial in very different ways depending on how strongly integrated they are through horizontal rhizomes, but the effect of clonal integration under conditions of stress such as burial is poorly studied for seagrasses. We test the effect of burial on tropical seagrasses that occur in multispecific meadows by subjecting plants in mixed stands to burial of 0, 2, 4, 8 and 16 cm for 27 days. Treatments were divided into those where rhizomes were severed and those where rhizomes were left intact. We hypothesize that species withstand burial better if clonal integration is maintained (intact rhizomes). Results showed that all species tolerated burial of up to 4 cm without adverse effects but significant reductions in shoot density and biomass become evident at 8 cm of burial. Furthermore, Cymodocea serrulata and Syringodium isoetifolium were strong integrators, i.e. they provide support for buried shoots, whereas Halophila ovalis and Halodule uninervis were weak integrators that did not show evidence of subsidizing buried shoots. Vertical elongation was observed for C. serrulata and H. uninervis as a response to burial only when rhizomes were severed, leading us to speculate on whether species rely on vertical elongation as an escape strategy only in the absence of resource translocation. Our distinction between the responses of treatments with intact rhizomes from those with severed rhizomes may be extended to an interpretation of burial scale (intact rhizomes=broad spatial-scale burial; severed rhizomes=fine spatial-scale burial). We concluded that broad spatial-scale burial exceeding 4 cm leads to rapid loss or reduction of all species. However, fine spatial-scale burial exceeding 4 cm, such as those caused by shrimp mounds (bioturbation), is expected to favor C. serrulata and S. isoetifolium, while H. ovalis and H. uninervis are disadvantaged. Clonal integration is an important trait in moderating the response of seagrasses to sediment burial and in this way, helps them to cope in high-stress habitats.

Forensic approach to an archaeological casework of "vampire" skeletal remains in Venice: odontological and anthropological prospectus.

PubMed

Nuzzolese, Emilio; Borrini, Matteo

2010-11-01

During the years 2006-2007, the Archeological Superintendent of Veneto (Italy) promoted a research project on mass graves located on Nuovo Lazzaretto in Venice, where the corpses of plague deaths were buried during the 16th and 17th centuries. The burials were of different stages and are believed to be the remains of plague victims from the numerous outbreaks of pestilence, which occurred between the 15th and 17th centuries. Among the fragmented and commingled human bones, an unusual burial was found. The body was laid supine, with the top half of the thorax intact, arms parallel to the rachis axis, the articulations were anatomically unaltered. Both the skull morphology and the dimensions of the caput omeris suggest the body was a woman. A brick of moderate size was found inside the oral cavity, keeping the mandible wide open. The data collected by the anthropologist were used to generate a taphonomic profile, which precluded the positioning of the brick being accidental. Likewise, the probability of the brick having come from the surrounding burial sediment was rejected, as the only other inclusions found were bone fragments from previous burials in the same area. The data collected by the odontologist were employed for age estimation and radiological dental assessment. The forensic profile was based conceptually on the "circumstances of death" and concluded that the positioning of the brick was intentional, and attributed to a symbolic burial ritual. This ritual confirms the intimate belief held at those times, between the plague and the mythological character of the vampire. © 2010 American Academy of Forensic Sciences.

38 CFR - § 3.1705 Burial allowance based on non-service-connected death.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 38 Pensions, Bonuses, and Veterans' Relief 1 2014-07-01 2014-07-01 false § 3.1705 Burial allowance based on non-service-connected death. Section Pensions, Bonuses, and Veterans' Relief DEPARTMENT OF VETERANS AFFAIRS ADJUDICATION Burial Benefits Burial Benefits: Allowances & Expenses Paid by Va A08se3. § 3.1705 Burial allowance based on...

Cleanup Verification Package for the 618-2 Burial Ground

DOE Office of Scientific and Technical Information (OSTI.GOV)

W. S. Thompson

2006-12-28

This cleanup verification package documents completion of remedial action for the 618-2 Burial Ground, also referred to as Solid Waste Burial Ground No. 2; Burial Ground No. 2; 318-2; and Dry Waste Burial Site No. 2. This waste site was used primarily for the disposal of contaminated equipment, materials and laboratory waste from the 300 Area Facilities.

[Prolapse of the uterus and cataract: a comparison of veterinary and human medicine in Greco-Roman antiquity].

PubMed

Fischer, K D

2005-01-01

A number of surgical interventions in ancient veterinary medicine were modelled on the same procedures in human medicine. This is discussed in some detail for the prolapse of the uterus and the couching of the cataract in horses. In the introductory section, the importance of Switzerland and neighbouring areas for the transmission of ancient veterinary medicine is highlighted.

Ancient pathogen DNA in archaeological samples detected with a Microbial Detection Array.

PubMed

Devault, Alison M; McLoughlin, Kevin; Jaing, Crystal; Gardner, Shea; Porter, Teresita M; Enk, Jacob M; Thissen, James; Allen, Jonathan; Borucki, Monica; DeWitte, Sharon N; Dhody, Anna N; Poinar, Hendrik N

2014-03-06

Ancient human remains of paleopathological interest typically contain highly degraded DNA in which pathogenic taxa are often minority components, making sequence-based metagenomic characterization costly. Microarrays may hold a potential solution to these challenges, offering a rapid, affordable, and highly informative snapshot of microbial diversity in complex samples without the lengthy analysis and/or high cost associated with high-throughput sequencing. Their versatility is well established for modern clinical specimens, but they have yet to be applied to ancient remains. Here we report bacterial profiles of archaeological and historical human remains using the Lawrence Livermore Microbial Detection Array (LLMDA). The array successfully identified previously-verified bacterial human pathogens, including Vibrio cholerae (cholera) in a 19th century intestinal specimen and Yersinia pestis ("Black Death" plague) in a medieval tooth, which represented only minute fractions (0.03% and 0.08% alignable high-throughput shotgun sequencing reads) of their respective DNA content. This demonstrates that the LLMDA can identify primary and/or co-infecting bacterial pathogens in ancient samples, thereby serving as a rapid and inexpensive paleopathological screening tool to study health across both space and time.

A molecular portrait of maternal sepsis from Byzantine Troy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Devault, Alison M.; Mortimer, Tatum D.; Kitchen, Andrew

Pregnancy complications are poorly represented in the archeological record, despite their importance in contemporary and ancient societies. While we excavated a Byzantine cemetery in Troy, we discovered calcified abscesses among a woman’s remains. Scanning electron microscopy of the tissue revealed ‘ghost cells’, resulting from dystrophic calcification, which preserved ancient maternal, fetal and bacterial DNA of a severe infection, likely chorioamnionitis.Gardnerella vaginalisandStaphylococcus saprophyticusdominated the abscesses. Phylogenomic analyses of ancient, historical, and contemporary data showed thatG. vaginalisTroy fell within contemporary genetic diversity, whereasS. saprophyticusTroy belongs to a lineage that does not appear to be commonly associated with human disease today. We speculatemore » that the ecology ofS. saprophyticusinfection may have differed in the ancient world as a result of close contacts between humans and domesticated animals. Our results highlight the complex and dynamic interactions with our microbial milieu that underlie severe maternal infections.« less

A molecular portrait of maternal sepsis from Byzantine Troy

DOE PAGES

Devault, Alison M.; Mortimer, Tatum D.; Kitchen, Andrew; ...

2017-01-10

Pregnancy complications are poorly represented in the archeological record, despite their importance in contemporary and ancient societies. While we excavated a Byzantine cemetery in Troy, we discovered calcified abscesses among a woman’s remains. Scanning electron microscopy of the tissue revealed ‘ghost cells’, resulting from dystrophic calcification, which preserved ancient maternal, fetal and bacterial DNA of a severe infection, likely chorioamnionitis.Gardnerella vaginalisandStaphylococcus saprophyticusdominated the abscesses. Phylogenomic analyses of ancient, historical, and contemporary data showed thatG. vaginalisTroy fell within contemporary genetic diversity, whereasS. saprophyticusTroy belongs to a lineage that does not appear to be commonly associated with human disease today. We speculatemore » that the ecology ofS. saprophyticusinfection may have differed in the ancient world as a result of close contacts between humans and domesticated animals. Our results highlight the complex and dynamic interactions with our microbial milieu that underlie severe maternal infections.« less

Ancient genomics

PubMed Central

Der Sarkissian, Clio; Allentoft, Morten E.; Ávila-Arcos, María C.; Barnett, Ross; Campos, Paula F.; Cappellini, Enrico; Ermini, Luca; Fernández, Ruth; da Fonseca, Rute; Ginolhac, Aurélien; Hansen, Anders J.; Jónsson, Hákon; Korneliussen, Thorfinn; Margaryan, Ashot; Martin, Michael D.; Moreno-Mayar, J. Víctor; Raghavan, Maanasa; Rasmussen, Morten; Velasco, Marcela Sandoval; Schroeder, Hannes; Schubert, Mikkel; Seguin-Orlando, Andaine; Wales, Nathan; Gilbert, M. Thomas P.; Willerslev, Eske; Orlando, Ludovic

2015-01-01

The past decade has witnessed a revolution in ancient DNA (aDNA) research. Although the field's focus was previously limited to mitochondrial DNA and a few nuclear markers, whole genome sequences from the deep past can now be retrieved. This breakthrough is tightly connected to the massive sequence throughput of next generation sequencing platforms and the ability to target short and degraded DNA molecules. Many ancient specimens previously unsuitable for DNA analyses because of extensive degradation can now successfully be used as source materials. Additionally, the analytical power obtained by increasing the number of sequence reads to billions effectively means that contamination issues that have haunted aDNA research for decades, particularly in human studies, can now be efficiently and confidently quantified. At present, whole genomes have been sequenced from ancient anatomically modern humans, archaic hominins, ancient pathogens and megafaunal species. Those have revealed important functional and phenotypic information, as well as unexpected adaptation, migration and admixture patterns. As such, the field of aDNA has entered the new era of genomics and has provided valuable information when testing specific hypotheses related to the past. PMID:25487338

Biodeterioration of marble in an underwater environment.

PubMed

Cámara, Beatriz; de Buergo, Mónica Álvarez; Bethencourt, Manuel; Fernández-Montblanc, Tomás; La Russa, Mauro F; Ricca, Michela; Fort, Rafael

2017-12-31

This study examines the deterioration of geomaterials used throughout history that today may be found lying on the ocean floor. Submerged archaeological sites including cargoes from shipwrecks or ancient city ruins have been a topic of interest from a perspective of in situ musealization, as a way of making underwater cultural heritage accessible to the public. In an experimental study conducted at an underwater archaeological site in the Bay of Cádiz (SW Spain), we subjected two types of marble (Carrara and Macael) to three conditions to which submerged archaeological objects are often exposed: full exposure to the water column, natural processes of burial and unearthing, or permanent burial. After an 18-month study period, the factor found to mostly affect these materials was their biological colonization. This factor was assessed by estimating total surface biocover and the rate of surface biocolonization, and also through the identification of skeletons and associated alteration forms by light microscopy, and scanning electron microscopy (SEM). Biofouling and bioerosion were the main causes of biodeterioration and dependent on the position of the marble specimens in the seawater. The response of both materials was similar, though dolomite crystals in the Carrara marble acted as a protective barrier against actively penetrating microorganisms. These investigations have allowed the study of tracers left by epilithic encrusting organisms and endolithic bioeroders on marbles intentionally exposed to seawater, providing new insights to the understanding of the biodeterioration processes occurring in cultural heritage stones, with significant implications when they are part of underwater archaeological remains. Copyright © 2017 Elsevier B.V. All rights reserved.

Early Acheulean technology in the Rietputs Formation, South Africa, dated with cosmogenic nuclides.

PubMed

Gibbon, Ryan J; Granger, Darryl E; Kuman, Kathleen; Partridge, Timothy C

2009-02-01

An absolute dating technique based on the build-up and decay of (26)Al and (10)Be in the mineral quartz provides crucial evidence regarding early Acheulean hominid distribution in South Africa. Cosmogenic nuclide burial dating of an ancient alluvial deposit of the Vaal River (Rietputs Formation) in the western interior of South Africa shows that coarse gravel and sand aggradation there occurred ca 1.57+/-0.22Ma, with individual ages of samples ranging from 1.89+/-0.19 to 1.34+/-0.22Ma. This was followed by aggradation of laminated and cross-bedded fine alluvium at ca 1.26+/-0.10Ma. The Rietputs Formation provides an ideal situation for the use of the cosmogenic nuclide burial dating method, as samples could be obtained from deep mining pits at depths ranging from 7 to 16 meters. Individual dates provide only a minimum age for the stone tool technology preserved within the deposits. Each assemblage represents a time averaged collection. Bifacial tools distributed throughout the coarse gravel and sand unit can be assigned to an early phase of the Acheulean. This is the first absolute radiometric dated evidence for early Acheulean artefacts in South Africa that have been found outside of the early hominid sites of the Gauteng Province. These absolute dates also indicate that handaxe-using hominids inhabited southern Africa as early as their counterparts in East Africa. The simultaneous appearance of the Acheulean in different parts of the continent implies relatively rapid technology development and the widespread use of large cutting tools in the African continent by ca 1.6Ma.

Isotopic Signature of the Ancient Biosphere

NASA Technical Reports Server (NTRS)

DesMarais, D. J.; Chang, Sherwood (Technical Monitor)

1997-01-01

The age distribution of 261 field localities, sampled for their well-preserved Archean and Proterozoic sedimentary rocks, revealed a 500-700 Ma episodicity. Assuming that the numbers of sites are a proxy for mass of sediments, the record of well-preserved sediments is more abundant in the intervals 3.5-3.3, 2.8-2.5, 2.1-1.8, 1.5-1.3, and 1.0-0.54 Ga than in the intervening intervals. It is proposed that the crustal inventory of photosynthetic organic carbon was modulated by the volume of sedimentation in sites favorable for the burial and long-term preservation of organic carbon. Tectonic processes controlled this sediment volume. Episodic increases in the organic inventory led to stepwise increases in oxidized reservoirs (e.g., O2, SO4(2-), Fe(3+). The interval 2.9-2.5 Ga recorded a large rise in seawater Sr-87/Sr-86, the oldest-known extensive banded iron formations, and the first evidence (C-13-depleted kerogens) of O2 use by methylotrophic bacteria. The interval 2.2-1.8 Ga has both carbon isotopic evidence for a stepwise increase in the organic reservoir and also paleosol evidence for an O2 increase. The interval 1.1-0.6 Ga shows isotopic evidence for another organic carbon increase. The interval 1.5-1.3 Ga revealed no such increases as yet, perhaps because incomplete rifting of the mid-Proterozoic supercontinent was associated with extensive sedimentation in oxidized continental basins, producing redbeds, coarse clastics, etc. Such sedimentation did not promote the burial of reduced carbon.

Carbonate-evaporite cycles in the Miocene to Holocene of Abu Dhabi, United Arab Emirates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Whittle, G.L.; Alsharhan, A.S.; Takezaki, H.

1995-08-01

The coastal sabkhas of the United Arab Emirates provide a Holocene analog for the study of evaporite formation. Carbonate-evaporite sequences are common throughout geologic history and, in the Arabian Gulf region in particular, create the reservoir-seal relationship of some of the most prolific hydrocarbon reservoirs in the world. Detailed core description, thin section study and geochemical analysis of Miocene to Holocene cores from the sabkha of Abu Dhabi have been performed in order to characterize modern sabkha diagenetic patterns. Two primary lithologies, dolomite and anhydrite were identified and subdivided into lithofacies. Based on these lithofacies, deposition is interpreted to havemore » occurred in shallow open marine, lagoonal, tidal channel, tidal/algal flats and supratidal sabkha settings. The primary diagenetic effects are dolomitization, anhydritc formation and leaching. As anhydrite precipitated (in the form of gypsum), the Mg:Ca ratio increased to the point where rapid dolomitization of original limestone occurred. Leaching was pervasive, as subaerial exposure led to the formation of moldic porosity in dolomitized packstones and grainstones. Dolomitic cements in these pores, and leached zones in some of these crystals suggests that leaching continued after dolomitization. By comparing the Holocene sabkha sediments to ancient ones, insight may be gained into the extent of dolomilization both with depth and distance for in the high water mark, the zonation of the stratigraphy from upper supratidal to shallow shelf, the preservation potential of algal mats after burial, the compaction effects after shallow burial, and other diagenetic alterations.« less

[Effect of shifting sand burial on evaporation reduction and salt restraint under saline water irrigation in extremely arid region].

PubMed

Zhang, Jian-Guo; Zhao, Ying; Xu, Xin-Wen; Lei, Jia-Qiang; Li, Sheng-Yu; Wang, Yong-Dong

2014-05-01

The Taklimakan Desert Highway Shelterbelt is drip-irrigated with high saline groundwater (2.58-29.70 g x L(-1)), and shifting sand burial and water-salt stress are most common and serious problems in this region. So it is of great importance to study the effect of shifting sand burial on soil moisture evaporation, salt accumulation and their distribution for water saving, salinity restraint, and suitable utilization of local land and water resources. In this study, Micro-Lysimeters (MLS) were used to investigate dynamics of soil moisture and salt under different thicknesses of sand burial (1, 2, 3, 4, and 5 cm), and field control experiments of drip-irrigation were also carried out to investigate soil moisture and salt distribution under different thicknesses of shifting sand burial (5, 10, 15, 20, 25, 30, 35, and 40 cm). The soil daily and cumulative evaporation decreased with the increase of sand burial thickness in MLS, cumulative evaporation decreased by 2.5%-13.7% compared with control. And evaporative inhibiting efficiency increased with sand burial thickness, evaporative inhibiting efficiency of 1-5 cm sand burial was 16.7%-79.0%. Final soil moisture content beneath the interface of sand burial increased with sand burial thickness, and it increased by 2.5%-13.7% than control. The topsoil EC of shifting sand in MLS decreased by 1.19-6.00 mS x cm(-1) with the increasing sand burial thickness, whereas soil salt content beneath the interface in MLS increased and amplitude of the topsoil salt content was higher than that of the subsoil. Under drip-irrigation with saline groundwater, average soil moisture beneath the interface of shifting sand burial increased by 0.4% -2.0% compare with control, and the highest value of EC was 7.77 mS x cm(-1) when the sand burial thickness was 10 cm. The trend of salt accumulation content at shifting sand surface increased firstly, and then decreased with the increasing sand burial thickness. Soil salt contents beneath the interface of shifting sand burial were much lower than that of shifting sand surface. 35 cm was the critical sand burial thickness for water-saving and salt restraint. In summary, sand burial had obvious inhibition effects on soil evaporation and salt accumulation, so maybe it could be used to save water and reduce salt accumulation in arid shifting desert areas.

The presence of ancient human T-cell lymphotropic virus type I provirus DNA in an Andean mummy.

PubMed

Li, H C; Fujiyoshi, T; Lou, H; Yashiki, S; Sonoda, S; Cartier, L; Nunez, L; Munoz, I; Horai, S; Tajima, K

1999-12-01

The worldwide geographic and ethnic clustering of patients with diseases related to human T-cell lymphotropic virus type I (HTLV-I) may be explained by the natural history of HTLV-I infection. The genetic characteristics of indigenous people in the Andes are similar to those of the Japanese, and HTLV-I is generally detected in both groups. To clarify the common origin of HTLV-I in Asia and the Andes, we analyzed HTLV-I provirus DNA from Andean mummies about 1,500 years old. Two of 104 mummy bone marrow specimens yielded a band of human beta-globin gene DNA 110 base pairs in length, and one of these two produced bands of HTLV-I-pX (open reading frame encoding p40x, p27x) and HTLV-I-LTR (long terminal repeat) gene DNA 159 base pairs and 157 base pairs in length, respectively. The nucleotide sequences of ancient HTLV-I-pX and HTLV-I-LTR clones isolated from mummy bone marrow were similar to those in contemporary Andeans and Japanese, although there was microheterogeneity in the sequences of some mummy DNA clones. This result provides evidence that HTLV-I was carried with ancient Mongoloids to the Andes before the Colonial era. Analysis of ancient HTLV-I sequences could be a useful tool for studying the history of human retroviral infection as well as human prehistoric migration.

History of Smallpox and Its Spread in Human Populations.

PubMed

Thèves, Catherine; Crubézy, Eric; Biagini, Philippe

2016-08-01

Smallpox is considered among the most devastating of human diseases. Its spread in populations, initiated for thousands of years following a probable transmission from an animal host, was concomitant with movements of people across regions and continents, trade and wars. Literature permitted to retrace the occurrence of epidemics from ancient times to recent human history, smallpox having affected all levels of past society including famous monarchs. The disease was officially declared eradicated in 1979 following intensive vaccination campaigns.Paleomicrobiology dedicated to variola virus is restricted to few studies, most unsuccessful, involving ancient material. Only one recent approach allowed the identification of viral DNA fragments from lung tissue of a 300-year-old body excavated from permafrost in Eastern Siberia; phylogenetic analysis revealed that this ancient strain was distinct from those described during the 20th century.

Emergence of ancient cities in relation to geopolitical circumstances and climate change during late Holocene in northeastern Tibetan Plateau, China

NASA Astrophysics Data System (ADS)

Dong, Guanghui; Liu, Honggao; Yang, Yishi; Yang, Ying; Zhou, Aifeng; Wang, Zhongxin; Ren, Xiaoyan; Chen, Fahu

2016-12-01

The study of the history of human activities in ancient cities has provided valuable evidences for understanding the evolution of human-land relations during the late Holocene. Numerous ancient cities were discovered through archaeological surveys of the east Qinghai Province, located on the northeastern border of the Tibetan Plateau, China; however, the mystery of when or why these cities were built remains unsolved. As recorded in this paper, we sampled reliable dating materials from 47 ancient cities in the area, determined their ages by radiocarbon dating, and compared the dating results with historical documents and high resolution paleoclimate records to explore the influencing factors for the development of these ancient cities. The 54 radiocarbon dates indicated that most of these cities were built or repaired during the Han Dynasty (202 BC‒AD 220), Tang Dynasty (AD 618‒AD 907), the Five Dynasties and Ten Kingdoms period (AD 907‒AD 960), the Song dynasty (AD 960‒AD 1279), and the Ming Dynasty (AD 1368‒AD 1644). The radiocarbon dates correspond well with historical records of the area. Our work suggests the ancient cities in east Qinghai Province were likely built primarily for military defense, and may have also have been affected by climate change.

Relationship between plant traits and resistance to burial by marly sediment

NASA Astrophysics Data System (ADS)

Burylo, M.; Rey, F.; Dutoit, T.

2009-04-01

In marly lands of the French Southern Alps, harsh soil erosion results in sediment movements during intensive rainfall events. Plants can be submitted to sediment burial in their early stages of development and their protective function may be reduced. In a context of land restoration, it is important to know species resistance to environmental disturbances and to be able to predict it, in particular from plant traits (height, biomass, sugar and starch accumulation). However, few studies about woody species tolerance to burial by sediment have been carried out. Seedlings of five woody species were buried in marly sediment at three different depths in pot experiment during eight weeks: no burial (control), partial burial (50% stem height) and complete burial (100% stem height). Height through time, biomass and survival rates were measured to assess species resistance to burial. Results show that among the five species, only one (Acer campestre) survived complete burial. All plants survived partial burial, but there were significant differences in height and biomass between buried plants and control, and significant differences between species responses. Three different responses to disturbance were identified: negative (Hippophae rhamnoides, Ononis fruticosa), neutral (Robinia pseudo acacia, Pinus nigra) and positive (Acer campestre). Results finally suggest that species resistance to burial by marly sediment is related to sugar accumulation in plant stems.

Evaluation of Elevated Tritium Levels in Groundwater Downgradient from the 618-11 Burial Ground Phase I Investigations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dresel, P.E.; Smith, R.M.; Williams, B.A.

2000-05-01

This report describes the results of the preliminary investigation of elevated tritium in groundwater discovered near the 618-11 burial ground, located in the eastern part of the Hanford Site. Tritium in one well downgradient of the burial ground was detected at levels up to 8,140,000 pCi/L. The 618-11 burial ground received a variety of radioactive waste from the 300 Area between 1962 and 1967. The burial ground covers 3.5 hectare (8.6 acre) and contains trenches, large diameter caissons, and vertical pipe storage units. The burial ground was stabilized with a native sediment covering. The Energy Northwest reactor complex was constructedmore » immediately east of the burial ground.« less

Experimental sand burial affects seedling survivorship, morphological traits, and biomass allocation of Ulmus pumila var. sabulosa in the Horqin Sandy Land, China

NASA Astrophysics Data System (ADS)

Tang, Jiao; Busso, Carlos Alberto; Jiang, Deming; Musa, Ala; Wu, Dafu; Wang, Yongcui; Miao, Chunping

2016-07-01

As a native tree species, Ulmus pumila var. sabulosa (sandy elm) is widely distributed in the Horqin Sandy Land, China. However, seedlings of this species have to withstand various depths of sand burial after emergence because of increasing soil degradation, which is mainly caused by overgrazing, climate change, and wind erosion. An experiment was conducted to evaluate the changes in its survivorship, morphological traits, and biomass allocation when seedlings were buried at different burial depths: unburied controls and seedlings buried vertically up to 33, 67, 100, or 133 % of their initial mean seedling height. The results showed that partial sand burial treatments (i.e., less than 67 % burial) did not reduce seedling survivorship, which still reached 100 %. However, seedling mortality increased when sand burial was equal to or greater than 100 %. In comparison with the control treatment, seedling height and stem diameter increased at least by 6 and 14 % with partial burial, respectively. In the meantime, seedling taproot length, total biomass, and relative mass growth rates were at least enhanced by 10, 15.6, and 27.6 %, respectively, with the partial sand burial treatment. Furthermore, sand burial decreased total leaf area and changed biomass allocation in seedlings, partitioning more biomass to aboveground organs (e.g., leaves) and less to belowground parts (roots). Complete sand burial after seedling emergence inhibited its re-emergence and growth, even leading to death. Our findings indicated that seedlings of sandy elm showed some resistance to partial sand burial and were adapted to sandy environments from an evolutionary perspective. The negative effect of excessive sand burial after seedling emergence might help in understanding failures in recruitments of sparse elm in the study region.

Medicine and psychiatry in Western culture: among Ancient Greek myths and modern prejudices.

PubMed

Fornaro, Michele; Clementi, Nicoletta; Fornaro, Pantaleo

2009-01-01

While many ancient cultures contributed to our current knowledge about medicine and psychiatry origins, Ancient Greeks were among the best observers of feelings and moods patients could express toward medicine and toward what today referred as "psychopathology". Myths and religious references were used to explain what elsewhere impossible to understand or easily communicated. Most of ancient myths focus on ambiguous feelings patients could have towards drugs, especially psychotropic ones. Interestingly, such prejudices are common yet today. Recalling ancient findings and descriptions made using myths, should represent a valuable knowledge for modern physicians, especially for psychiatrists, and their patients, with the aim of better understanding each other and therefore achieving a better clinical outcome. The paper explores many human aspects and feelings toward doctors and their cures, referring to ancient myths, focusing on the perception of mental illness.

Like a pig out of water: seaborne spread of domestic pigs in Southern Italy and Sardinia during the Bronze and Iron Ages.

PubMed

Lega, C; Fulgione, D; Genovese, A; Rook, L; Masseti, M; Meiri, M; Cinzia Marra, A; Carotenuto, F; Raia, P

2017-02-01

Southern Italy has a long history of human occupation and passage of different cultures since the Early Holocene. Repeated, ancient introductions of pigs in several geographic areas in Europe make it difficult to understand pig translocation and domestication in Italy. The archeozoological record may provide fundamental information on this, hence shedding light on peopling and on trading among different ancient cultures in the Mediterranean. Yet, because of the scanty nature of the fossil record, ancient remains from human-associated animals are somewhat rare. Fortunately, ancient DNA analysis as applied to domestic species proved to be a powerful tool in revealing human migrations. Herein, we analyzed 80-bp fragment of mitochondrial DNA control region from 27 Sus scrofa ancient samples retrieved from Southern Italian and Sardinian archeological sites, spanning in age from the Mesolithic to the Roman period. Our results surprisingly indicate the presence of the Near Eastern haplotype Y1 on both Italy's major islands (Sardinia and Sicily) during the Bronze Age, suggesting the seaborne transportation of domestic pigs by humans at least during 1600-1300 BC. The presence of the Italian E2 clade in domestic contexts shows that the indigenous wild boar was effectively domesticated or incorporated into domestic stocks in Southern Italy during the Bronze Age, although the E2 haplotype has never been found in modern domestic breeds. Pigs belonging to the endemic E2 clade were thus traded between the Peninsula and Sardinia by the end of the second millennium BC and this genetic signature is still detected in Sardinian feral pigs.

Integrating archaeology and ancient DNA analysis to address invasive species colonization in the Gulf of Alaska.

PubMed

West, Catherine; Hofman, Courtney A; Ebbert, Steve; Martin, John; Shirazi, Sabrina; Dunning, Samantha; Maldonado, Jesus E

2017-10-01

The intentional and unintentional movement of plants and animals by humans has transformed ecosystems and landscapes globally. Assessing when and how a species was introduced are central to managing these transformed landscapes, particularly in island environments. In the Gulf of Alaska, there is considerable interest in the history of mammal introductions and rehabilitating Gulf of Alaska island environments by eradicating mammals classified as invasive species. The Arctic ground squirrel (Urocitellus parryii) is of concern because it affects vegetation and seabirds on Gulf of Alaska islands. This animal is assumed to have been introduced by historic settlers; however, ground squirrel remains in the prehistoric archaeological record of Chirikof Island, Alaska, challenge this timeline and suggest they colonized the islands long ago. We used 3 lines of evidence to address this problem: direct radiocarbon dating of archaeological squirrel remains; evidence of prehistoric human use of squirrels; and ancient DNA analysis of dated squirrel remains. Chirikof squirrels dated to at least 2000 years ago, and cut marks on squirrel bones suggested prehistoric use by people. Ancient squirrels also shared a mitochondrial haplotype with modern Chirikof squirrels. These results suggest that squirrels have been on Chirikof longer than previously assumed and that the current population of squirrels is closely related to the ancient population. Thus, it appears ground squirrels are not a recent, human-mediated introduction and may have colonized the island via a natural dispersal event or an ancient human translocation. © 2016 The Authors. Conservation Biology published by Wiley Periodicals, Inc. on behalf of Society for Conservation Biology.

Micromorphological aspects of forensic geopedology: time-dependent markers of decomposition and permanence in soil in experimental burials

NASA Astrophysics Data System (ADS)

Zangarini, Sara; Cattaneo, Cristina; Trombino, Luca

2014-05-01

The importance of the role played by soil scientists grows up in the modern forensic sciences, in particular when buried human remains strongly decomposed or skeletonized are found in different environment situations. An interdisciplinary team, formed by earth and legal medicine researchers from the University of Milan is working on several sets of experimental burial of pigs in different soil types and for different times of burial, in order to get new evidences on environmental responses to the burial, focusing specifically on geopedological and micropedological aspects. The present work is aimed at the micromorphological (petrographic microscope) and ultramicroscopic (SEM) cross characterization of bone tissue in buried remains, in order to describe bone alteration pathways due both to decomposition and to permanence in soil. These methods allow identifying in the tissues of analysed bones: - Unusual concentrations of metal oxides (i.e. Fe, Mn), in the form of violet-blue colorations (in XPL), which seem to be related to chemical conditions in the burial area; their presence could be a method to discriminate permanence in soil rather than a different environment of decomposition. - Magnesium phosphate (i.e. Mg3(PO4)2 ) crystallizations, usually noticed in bones buried from 7 to 103 weeks; their presence seems to be related to the decomposition both of the bones themselves and of soft tissues. - The presence of significant sulphur levels (i.e. SO3) in bones buried for over 7 weeks, which seem to be related to the transport and fixation of soft tissues decomposition fluids. These results point out that micromorphological techniques coupled with spatially resolved chemical analyses allow identifying both indicators of the permanence of the remains into the soil (i.e. metal oxides concentrations) and time-dependent markers of decomposition (i.e. significant sulphur levels and magnesium phosphate) in order to determine PMI (post-mortem-interval) and TSB (time-since-burial). Further studies and new experiments are in progress in order to better clarify the bone alteration pathways on different skeletal districts and in different kind of soils.

Buried Alive: The Behavioural Response of the Mussels, Modiolus modiolus and Mytilus edulis to Sudden Burial by Sediment

PubMed Central

Hutchison, Zoë L.; Hendrick, Vicki J.; Burrows, Michael T.; Wilson, Ben; Last, Kim S.

2016-01-01

Sedimentation in the sea occurs through natural processes, such as wave and tidal action, which can be exacerbated during storms and floods. Changes in terrestrial land use, marine aggregate extraction, dredging, drilling and mining are known to result in substantial sediment deposition. Research suggests that deposition will also occur due to the modern development of marine renewable energy. The response to individual burial under three depths of sediment, three sediment fractions and five burial durations was investigated in two mussel species, Modiolus modiolus and Mytilus edulis in specialist mesocosms. Both mussel species showed substantial mortality, which increased with duration of burial and burial by finer sediment fractions. M. modiolus was better able to survive short periods of burial than M. edulis, but at longer durations mortality was more pronounced. No mortality was observed in M. modiolus in burial durations of eight days or less but by 16 days of burial, over 50% cumulative mortality occurred. Under variable temperature regimes, M. edulis mortality increased from 20% at 8°C to over 60% at 14.5 and 20°C. Only M. edulis was able to emerge from burial, facilitated by increased byssus production, laid mostly on vertical surfaces but also on sediment particles. Emergence was higher from coarse sediment and shallow burials. Byssus production in M. edulis was not related to the condition index of the mussels. Results suggest that even marginal burial would result in mortality and be more pronounced in warm summer periods. Our results suggest that in the event of burial, adult M. modiolus would not be able to emerge from burial unless local hydrodynamics assist, whereas a small proportion of M. edulis may regain contact with the sediment water interface. The physiological stress resulting in mortality, contribution of local hydrodynamics to survival and other ecological pressures such as mussels existing in aggregations, are discussed. PMID:26982582

Sediment burial stimulates the growth and propagule production of Spartina alterniflora Loisel.

NASA Astrophysics Data System (ADS)

Deng, Zifa; An, Shuqing; Zhao, Congjiao; Chen, Lin; Zhou, Changfang; Zhi, Yingbiao; Li, Hongli

2008-03-01

Spartina alterniflora Loisel., an extensively invasive species on the Chinese coast, is a focus of increasing management concern due to its high expansion rate in estuaries and tidal zone, and the significant damage it causes to native ecosystems. In order to understand the processes and mechanisms of invasion of S. alterniflora in China, the impact of three sediment types (sand, sand-loam mixture and loam) and five buried patterns (unburied, 50% burial of initial plant height, 75% burial of initial plant height, complete burial and repeated burial) on the growth of seedlings or ramets was investigated. Results showed that each of the three factors (sediment types, burial pattern and plant materials) and interactions between/among them, significantly affected height and clonal growth, and biomass accumulation and allocation. Plant height, total biomass and number of new vegetative propagules significantly increased with progressive burial treatments. However, the complete burial treatment resulted in the death of all plant materials, and the maximum values of three parameters were found in the 50% burial or repeated burial treatments. Plant responses were determined by the instantaneous thickness of sediment of each time burial rather than by the total quantity of repeated burial. The growth of S. alterniflora was not shown to be dependent on specific types of sediment in sedimentation environment. In contrast to the unburied control, the proportion of primary tillers produced directly from initial individuals and the ratio between the aboveground and belowground biomass were greater under burial treatments. Seedlings produced more new vegetative propagules than vegetative offspring in all experimental treatments, and the former were apt to produce ramets from rhizomes rather than primary tillers. It is concluded that under various sedimentation environments, the clonal spread efficiency of seedlings was higher than that of vegetative offspring, and there is a positive feedback relationship between sedimentation and the growth of S. alterniflora. Thus, moderate sedimentation may stimulate the invasion of exotic species, S. alterniflora in coastal China.

Ancient Egyptian herbal wines

PubMed Central

McGovern, Patrick E.; Mirzoian, Armen; Hall, Gretchen R.

2009-01-01

Chemical analyses of ancient organics absorbed into pottery jars from the beginning of advanced ancient Egyptian culture, ca. 3150 B.C., and continuing for millennia have revealed that a range of natural products—specifically, herbs and tree resins—were dispensed by grape wine. These findings provide chemical evidence for ancient Egyptian organic medicinal remedies, previously only ambiguously documented in medical papyri dating back to ca. 1850 B.C. They illustrate how humans around the world, probably for millions of years, have exploited their natural environments for effective plant remedies, whose active compounds have recently begun to be isolated by modern analytical techniques. PMID:19365069

The Oldest Case of Decapitation in the New World (Lapa do Santo, East-Central Brazil).

PubMed

Strauss, André; Oliveira, Rodrigo Elias; Bernardo, Danilo V; Salazar-García, Domingo C; Talamo, Sahra; Jaouen, Klervia; Hubbe, Mark; Black, Sue; Wilkinson, Caroline; Richards, Michael Phillip; Araujo, Astolfo G M; Kipnis, Renato; Neves, Walter Alves

2015-01-01

We present here evidence for an early Holocene case of decapitation in the New World (Burial 26), found in the rock shelter of Lapa do Santo in 2007. Lapa do Santo is an archaeological site located in the Lagoa Santa karst in east-central Brazil with evidence of human occupation dating as far back as 11.7-12.7 cal kyBP (95.4% interval). An ultra-filtered AMS age determination on a fragment of the sphenoid provided an age range of 9.1-9.4 cal kyBP (95.4% interval) for Burial 26. The interment was composed of an articulated cranium, mandible and first six cervical vertebrae. Cut marks with a v-shaped profile were observed in the mandible and sixth cervical vertebra. The right hand was amputated and laid over the left side of the face with distal phalanges pointing to the chin and the left hand was amputated and laid over the right side of the face with distal phalanges pointing to the forehead. Strontium analysis comparing Burial 26's isotopic signature to other specimens from Lapa do Santo suggests this was a local member of the group. Therefore, we suggest a ritualized decapitation instead of trophy-taking, testifying for the sophistication of mortuary rituals among hunter-gatherers in the Americas during the early Archaic period. In the apparent absence of wealth goods or elaborated architecture, Lapa do Santo's inhabitants seemed to use the human body to express their cosmological principles regarding death.

Rock Magnetism: Successes and Mysteries

NASA Astrophysics Data System (ADS)

Dunlop, D. J.

2011-12-01

Louis Néel once proposed making ships "invisible" (i.e., magnetically undetectable) by giving them a permanent or remanent magnetism that would cancel the signal induced by the Earth's magnetic field. Like much of rock magnetism, this borders on the magical. Rocks possess a magnetic memory that verges on the phenomenal. An adequate magnetic lifetime for your credit card is until its expiry date and one must avoid exposure to magnetic fields and heat. But a rock's magnetic memory is forever, and the recipe for that durability includes, for igneous and metamorphic rocks, exposure to ancient fields while hot - near the Curie temperature in fact. The thermal remanent magnetism (TRM) thus produced is largely immune to later field changes at lower temperatures although luckily a fraction - a partial TRM overprint - does record later heating events, e.g., burial during major orogenies. When we lift the veil and look closely, on a microscale or nanoscale, it is perplexing to understand why paleomagnetism works so well when rocks seemingly contain so few of Néel's ideal recorders: single-domain grains with tightly coupled atomic spins. In larger grains with multiple domains, the walls between neighbouring domains move readily, like dislocations in crystals, enlarging some domains at the expense of others. This mutability makes any magnetic memory of multi-domain grains suspect. But around the threshold between single-domain and multi-domain structures - a specific grain size that varies widely from one magnetic mineral to another - there are recent predictions and observations of novel structures, including linked magnetic moments of nearby grains and interfacial moments of exsolved phases, that could go some way towards explaining why single-domain-like behaviour is so widespread. Many magnetic properties show an almost continuous variation with grain size, quite unlike the expected discontinuity at the single-domain threshold. Among these is initial susceptibility which governs a rock's induced response to weak fields like the Earth's. In particular, the Hopkinson peak in susceptibility near the Curie temperature - a potential source of "missing magnetism" in the deep lithosphere - increases steadily over at least a decade of decreasing grain size in magnetite. Single-domain recorders, in addition to their strong and long-lasting memory, have the property of TRM additivity and independence. This makes possible the Thellier method of determining paleofield intensity, a much more demanding undertaking than tracking paleomagnetic field directions, in which the ancient magnetic moment is gradually replaced by a set of partial TRMs produced in a known laboratory field. Partial TRMs produced in nature by heating during deep burial are also additive and independent. The temperature at which these overprints are removed in the laboratory yields - after correction for the very different natural and laboratory heating times - the burial temperature. This is the basis of magnetic paleothermometry. The interplay of time and temperature in TRM when combined with thermal history models provides estimates of when the global magnetic field of a planet, e.g., Mars, was born and died. But the grand conclusions so important to geophysics rest ultimately on the fidelity of the microscopic recorders in rocks and here, despite many advances, our understanding is still a work in progress.

Religious Zionism and Israeli Settlement Policy

DTIC Science & Technology

2014-06-01

Kook translate directly into the doctrines and actions of Gush Emunim.270 These ideas include Israel’s God -given ownership of their ancient homeland...founded by Theodore Herzl in 1897, and the traditional rabbinic teaching that rejects human efforts to secure a return to the ancient land of... ancient land of Israel. Religious Zionism is founded on the belief that Jews have an obligation to return to Israel; such a return is considered a

Peopling the past: new perspectives on the ancient Maya.

PubMed

Robin, C

2001-01-02

The new direction in Maya archaeology is toward achieving a greater understanding of people and their roles and their relations in the past. To answer emerging humanistic questions about ancient people's lives Mayanists are increasingly making use of new and existing scientific methods from archaeology and other disciplines. Maya archaeology is bridging the divide between the humanities and sciences to answer questions about ancient people previously considered beyond the realm of archaeological knowledge.

Antiquity of man in America indicated by radiometric dates on the Yuha burial site

USGS Publications Warehouse

Bischoff, J.L.; Merriam, R.; Childers, W.M.; Protsch, R.

1976-01-01

MUCH evidence suggests that man was present in the Western Hemisphere before 12,000 yr ago, but the case has remained less than conclusive 1. In some situations, the geological age of the site is reasonably well established but the association or nature of the artefacts is questionable2,3. In other cases, museum specimens of human bones dated by radiocarbon analysis of collagen lack desirable information concerning site location, geology, and stratigraphy even though the accuracy of their absolute ages seems valid4-6. We report here the results of radiometric dates of the Yuha burial site from Imperial County, California, for which the geology and stratigraphy have been documented and reported in detail7. ?? 1976 Nature Publishing Group.

Earliest floral grave lining from 13,700-11,700-y-old Natufian burials at Raqefet Cave, Mt. Carmel, Israel.

PubMed

Nadel, Dani; Danin, Avinoam; Power, Robert C; Rosen, Arlene M; Bocquentin, Fanny; Tsatskin, Alexander; Rosenberg, Danny; Yeshurun, Reuven; Weissbrod, Lior; Rebollo, Noemi R; Barzilai, Omry; Boaretto, Elisabetta

2013-07-16

Flowering plants possess mechanisms that stimulate positive emotional and social responses in humans. It is difficult to establish when people started to use flowers in public and ceremonial events because of the scarcity of relevant evidence in the archaeological record. We report on uniquely preserved 13,700-11,700-y-old grave linings made of flowers, suggesting that such use began much earlier than previously thought. The only potentially older instance is the questionable use of flowers in the Shanidar IV Neanderthal grave. The earliest cemeteries (ca. 15,000-11,500 y ago) in the Levant are known from Natufian sites in northern Israel, where dozens of burials reflect a wide range of inhumation practices. The newly discovered flower linings were found in four Natufian graves at the burial site of Raqefet Cave, Mt. Carmel, Israel. Large identified plant impressions in the graves include stems of sage and other Lamiaceae (Labiatae; mint family) or Scrophulariaceae (figwort family) species; accompanied by a plethora of phytoliths, they provide the earliest direct evidence now known for such preparation and decoration of graves. Some of the plant species attest to spring burials with a strong emphasis on colorful and aromatic flowers. Cave floor chiseling to accommodate the desired grave location and depth is also evident at the site. Thus, grave preparation was a sophisticated planned process, embedded with social and spiritual meanings reflecting a complex preagricultural society undergoing profound changes at the end of the Pleistocene.

Neolithic and medieval virus genomes reveal complex evolution of hepatitis B

PubMed Central

Key, Felix M; Kühnert, Denise; Bosse, Esther; Immel, Alexander; Rinne, Christoph; Kornell, Sabin-Christin; Yepes, Diego; Franzenburg, Sören; Heyne, Henrike O; Meier, Thomas; Lösch, Sandra; Meller, Harald; Friederich, Susanne; Nicklisch, Nicole; Alt, Kurt W; Schreiber, Stefan; Tholey, Andreas; Herbig, Alexander; Nebel, Almut

2018-01-01

The hepatitis B virus (HBV) is one of the most widespread human pathogens known today, yet its origin and evolutionary history are still unclear and controversial. Here, we report the analysis of three ancient HBV genomes recovered from human skeletons found at three different archaeological sites in Germany. We reconstructed two Neolithic and one medieval HBV genome by de novo assembly from shotgun DNA sequencing data. Additionally, we observed HBV-specific peptides using paleo-proteomics. Our results demonstrated that HBV has circulated in the European population for at least 7000 years. The Neolithic HBV genomes show a high genomic similarity to each other. In a phylogenetic network, they do not group with any human-associated HBV genome and are most closely related to those infecting African non-human primates. The ancient viruses appear to represent distinct lineages that have no close relatives today and possibly went extinct. Our results reveal the great potential of ancient DNA from human skeletons in order to study the long-time evolution of blood borne viruses. PMID:29745896

Neolithic and Medieval virus genomes reveal complex evolution of Hepatitis B.

PubMed

Krause-Kyora, Ben; Susat, Julian; Key, Felix M; Kühnert, Denise; Bosse, Esther; Immel, Alexander; Rinne, Christoph; Kornell, Sabin-Christin; Yepes, Diego; Franzenburg, Sören; Heyne, Henrike O; Meier, Thomas; Lösch, Sandra; Meller, Harald; Friederich, Susanne; Nicklisch, Nicole; Alt, Kurt W; Schreiber, Stefan; Tholey, Andreas; Herbig, Alexander; Nebel, Almut; Krause, Johannes

2018-05-10

The hepatitis B virus (HBV) is one of the most widespread human pathogens known today, yet its origin and evolutionary history are still unclear and controversial. Here, we report the analysis of three ancient HBV genomes recovered from human skeletons found at three different archaeological sites in Germany. We reconstructed two Neolithic and one medieval HBV genomes by de novo assembly from shotgun DNA sequencing data. Additionally, we observed HBV-specific peptides using paleo-proteomics. Our results show that HBV circulates in the European population for at least 7000 years. The Neolithic HBV genomes show a high genomic similarity to each other. In a phylogenetic network, they do not group with any human-associated HBV genome and are most closely related to those infecting African non-human primates. These ancient virus forms appear to represent distinct lineages that have no close relatives today and possibly went extinct. Our results reveal the great potential of ancient DNA from human skeletons in order to study the long-time evolution of blood borne viruses. © 2018, Krause-Kyora et al.

Dental Calculus and the Evolution of the Human Oral Microbiome.

PubMed

Warinner, Christina

2016-07-01

Characterizing the evolution of the oral microbiome is a challenging, but increasingly feasible, task. Recently, dental calculus has been shown to preserve ancient biomolecules from the oral microbiota, host tissues and diet for tens of thousands of years. As such, it provides a unique window into the ancestral oral microbiome. This article reviews recent advancements in ancient dental calculus research and emerging insights into the evolution and ecology of the human oral microbiome.

Computed tomographic evidence of atherosclerosis in the mummified remains of humans from around the world.

PubMed

Thompson, Randall C; Allam, Adel H; Zink, Albert; Wann, L Samuel; Lombardi, Guido P; Cox, Samantha L; Frohlich, Bruno; Sutherland, M Linda; Sutherland, James D; Frohlich, Thomas C; King, Samantha I; Miyamoto, Michael I; Monge, Janet M; Valladolid, Clide M; El-Halim Nur El-Din, Abd; Narula, Jagat; Thompson, Adam M; Finch, Caleb E; Thomas, Gregory S

2014-06-01

Although atherosclerosis is widely thought to be a disease of modernity, computed tomographic evidence of atherosclerosis has been found in the bodies of a large number of mummies. This article reviews the findings of atherosclerotic calcifications in the remains of ancient people-humans who lived across a very wide span of human history and over most of the inhabited globe. These people had a wide range of diets and lifestyles and traditional modern risk factors do not thoroughly explain the presence and easy detectability of this disease. Nontraditional risk factors such as the inhalation of cooking fire smoke and chronic infection or inflammation might have been important atherogenic factors in ancient times. Study of the genetic and environmental risk factors for atherosclerosis in ancient people may offer insights into this common modern disease. Copyright © 2014 World Heart Federation (Geneva). Published by Elsevier B.V. All rights reserved.

Human adaptation and population differentiation in the light of ancient genomes

PubMed Central

Key, Felix M.; Fu, Qiaomei; Romagné, Frédéric; Lachmann, Michael; Andrés, Aida M.

2016-01-01

The influence of positive selection sweeps in human evolution is increasingly debated, although our ability to detect them is hampered by inherent uncertainties in the timing of past events. Ancient genomes provide snapshots of allele frequencies in the past and can help address this question. We combine modern and ancient genomic data in a simple statistic (DAnc) to time allele frequency changes, and investigate the role of drift and adaptation in population differentiation. Only 30% of the most strongly differentiated alleles between Africans and Eurasians changed in frequency during the colonization of Eurasia, but in Europe these alleles are enriched in genic and putatively functional alleles to an extent only compatible with local adaptation. Adaptive alleles—especially those associated with pigmentation—are mostly of hunter-gatherer origin, although lactose persistence arose in a haplotype present in farmers. These results provide evidence for a role of local adaptation in human population differentiation. PMID:26988143

Phenotypes from ancient DNA: approaches, insights and prospects.

PubMed

Fortes, Gloria G; Speller, Camilla F; Hofreiter, Michael; King, Turi E

2013-08-01

The great majority of phenotypic characteristics are complex traits, complicating the identification of the genes underlying their expression. However, both methodological and theoretical progress in genome-wide association studies have resulted in a much better understanding of the underlying genetics of many phenotypic traits, including externally visible characteristics (EVCs) such as eye and hair color. Consequently, it has become possible to predict EVCs from human samples lacking phenotypic information. Predicting EVCs from genetic evidence is clearly appealing for forensic applications involving the personal identification of human remains. Now, a recent paper has reported the genetic determination of eye and hair color in samples up to 800 years old. The ability to predict EVCs from ancient human remains opens up promising perspectives for ancient DNA research, as this could allow studies to directly address archaeological and evolutionary questions related to the temporal and geographical origins of the genetic variants underlying phenotypes. © 2013 WILEY Periodicals, Inc.

Ancient human microbiomes

PubMed Central

Warinner, Christina; Speller, Camilla; Collins, Matthew J.; Lewis, Cecil M.

2015-01-01

Very recently, we discovered a vast new microbial self: the human microbiome. Our native microbiota interface with our biology and culture to influence our health, behavior, and quality of life, and yet we know very little about their origin, evolution, or ecology. With the advent of industrialization, globalization, and modern sanitation, it is intuitive that we have changed our relationship with microbes, but we have little information about the ancestral state of our microbiome, and therefore, we lack a foundation for characterizing this change. High-throughput sequencing has opened up new opportunities in the field of paleomicrobiology, allowing us to investigate the evolution of the complex microbial ecologies that inhabit our bodies. By focusing on recent coprolite and dental calculus research, we explore how emerging research on ancient human microbiomes is changing the way we think about ancient disease and how archaeological studies can contribute to a medical understanding of health and nutrition today. PMID:25559298

Medicine and psychiatry in Western culture: Ancient Greek myths and modern prejudices

PubMed Central

Fornaro, Michele; Clementi, Nicoletta; Fornaro, Pantaleo

2009-01-01

The origins of Western culture extensively relate to Ancient Greek culture. While many ancient cultures have contributed to our current knowledge about medicine and the origins of psychiatry, the Ancient Greeks were among the best observers of feelings and moods patients expressed towards medicine and toward what today is referred to as 'psychopathology'. Myths and religious references were used to explain what was otherwise impossible to understand or be easily communicated. Most ancient myths focus on ambiguous feelings patients may have had towards drugs, especially psychotropic ones. Interestingly, such prejudices are common even today. Recalling ancient findings and descriptions made using myths could represent a valuable knowledge base for modern physicians, especially for psychiatrists and their patients, with the aim of better understanding each other and therefore achieving a better clinical outcome. This paper explores many human aspects and feelings towards doctors and their cures, referring to ancient myths and focusing on the perception of mental illness. PMID:19811642

An Assessment of Regional Variations in Martian Modified Impact Crater Morphology

NASA Astrophysics Data System (ADS)

Craddock, Robert A.; Bandeira, Lourenço.; Howard, Alan D.

2018-03-01

Impact craters on Mars have been extensively modified by ancient geologic processes that may have included rainfall and surface runoff, snow and ice, denudation by lava flows, burial by eolian material, or others. Many of these processes can leave distinct signatures on the morphometry of the modified impact crater as well as the surrounding landscape. To look for signs of potential regional differences in crater modification processes, we conducted an analysis of different morphometric parameters related to modified impact craters located in the Margaritifer Sinus, Sinus Sabaeus, Iapygia, Mare Tyrrhenum, Aeolis, and Eridania quadrangles, including depth, crater wall slope, crater floor slope, the curvature between the interior wall and the crater floor slope, and the curvature between the interior wall and surrounding landscape. A Welch's t test analysis comparing these parameters shows that fresh impact craters (Type 4) have consistent morphologies regardless of their geographic location examined in this study, which is not unexpected. Modified impact craters both in the initial (Type 3) and terminal stages (Type 1) of modification also have statistically consistent morphologies. This would suggest that the processes that operated in the late Noachian were globally ubiquitous, and that modified craters eventually reached a stable crater morphology. However, craters preserved in advanced (but not terminal) stages of modification (Type 2) have morphologies that vary across the quadrangles. It is possible that these variations reflect spatial differences in the types and intensity of geologic processes that operated during the Noachian, implying that the ancient climate also varied across regions.

Performance analysis of deciduous morphology for detecting biological siblings.

PubMed

Paul, Kathleen S; Stojanowski, Christopher M

2015-08-01

Family-centered burial practices influence cemetery structure and can represent social group composition in both modern and ancient contexts. In ancient sites dental phenotypic data are often used as proxies for underlying genotypes to identify potential biological relatives. Here, we test the performance of deciduous dental morphological traits for differentiating sibling pairs from unrelated individuals from the same population. We collected 46 deciduous morphological traits for 69 sibling pairs from the Burlington Growth Centre's long term Family Study. Deciduous crown features were recorded following published standards. After variable winnowing, inter-individual Euclidean distances were generated using 20 morphological traits. To determine whether sibling pairs are more phenotypically similar than expected by chance we used bootstrap resampling of distances to generate P values. Multidimensional scaling (MDS) plots were used to evaluate the degree of clustering among sibling pairs. Results indicate an average distance between siblings of 0.252, which is significantly less than 9,999 replicated averages of 69 resampled pseudo-distances generated from: 1) a sample of non-relative pairs (P < 0.001), and 2) a sample of relative and non-relative pairs (P < 0.001). MDS plots indicate moderate to strong clustering among siblings; families occupied 3.83% of the multidimensional space on average (versus 63.10% for the total sample). Deciduous crown morphology performed well in identifying related sibling pairs. However, there was considerable variation in the extent to which different families exhibited similarly low levels of phenotypic divergence. © 2015 Wiley Periodicals, Inc.

Ancient Genomics and the Peopling of the Southwest Pacific

PubMed Central

Skoglund, Pontus; Posth, Cosimo; Sirak, Kendra; Spriggs, Matthew; Valentin, Frederique; Bedford, Stuart; Clark, Geoffrey; Reepmeyer, Christian; Petchey, Fiona; Fernandes, Daniel; Fu, Qiaomei; Harney, Eadaoin; Lipson, Mark; Mallick, Swapan; Novak, Mario; Rohland, Nadin; Stewardson, Kristin; Abdullah, Syafiq; Cox, Murray P.; Friedlaender, Françoise R.; Friedlaender, Jonathan S.; Kivisild, Toomas; Koki, George; Kusuma, Pradiptajati; Merriwether, D. Andrew; Ricaut, Francois-X.; Wee, Joseph T. S.; Patterson, Nick; Krause, Johannes; Pinhasi, Ron; Reich, David

2017-01-01

The appearance of people associated with the Lapita culture in the South Pacific ~3,000 years ago1 marked the beginning of the last major human dispersal to unpopulated lands. However, the relationship of these pioneers to the long established Papuans of the New Guinea region is unclear. We report genome-wide ancient DNA data from four individuals from Vanuatu (~3100-2700 years before present) and Tonga (~2700-2300 years before present), and co-analyze them with 778 present-day East Asians and Oceanians. Today, indigenous peoples of the South Pacific harbor a mixture of ancestry from Papuans and a population of East Asian origin that does not exist in unmixed form today, but is a match to the ancient individuals. Most analyses have interpreted the minimum of twenty-five percent Papuan ancestry in the region today as evidence that the first humans to reach Remote Oceania, including Polynesia, were derived from population mixtures near New Guinea, prior to the further expansion into Remote Oceania2–5. However, our finding that the ancient individuals had little to no Papuan ancestry implies later human population movements that spread Papuan ancestry through the South Pacific after the islands’ first peopling. PMID:27698418

Congenital anomalies of the limbs in mythology and antiquity.

PubMed

Mavrogenis, Andreas F; Markatos, Konstantinos; Nikolaou, Vasilios; Gartziou-Tatti, Ariadne; Soucacos, Panayotis N

2018-04-01

Congenital anomalies of the limbs have been observed since ancient human civilizations, capturing the imagination of ancient physicians and people. The knowledge of the era could not possibly theorize on the biologic aspects of these anomalies; however, from the very beginning of civilization the spiritual status of people attempted to find a logical explanation for the existence of such cases. The next logical step of the spiritual and religious system of the ancients was to correlate these anomalies with the Gods and to attribute them to a different level of existence in order to rationalize their existence. In these settings, the mythology and religious beliefs of ancient civilizations comprised several creatures that were related to the observed congenital anomalies in humans. The purpose of this historic review is to summarize the depiction of congenital anomalies of the limbs in mythology and antiquity, to present several mythological creatures with resemblance to humans with congenital anomalies of the limbs, to present the atmosphere of the era concerning the congenital anomalies, and to theorize on the anomaly and medical explanation upon which such creatures were depicted. Our aim is to put historic information in one place, creating a comprehensive review that the curious reader would find interesting and enjoyable.

DEVELOPING TOOLS FOR MONITORED NATURAL RECOVERY OF PCB-CONTAMINATED SEDIMENTS AT LAKE HARTWELL, SC

EPA Science Inventory

Contaminated sediments pose a risk to human health and the environment . The management of this risk is currently limited practically to three technologies: dredging, capping, and natural recovery. Monitored natural recovery relies on the natural burial and removal mechanisms to...

Shades of Gray: Skeletal Analysis and the Repatriation Process

ERIC Educational Resources Information Center

Mayes, Arion T.

2010-01-01

Negotiations over archaeological human remains have been complicated interactions spanning centuries of attempts to resolve differences of opinion with regard to the investigation, ownership, and disposition of early American Indian burials. Guilt, fear, power, politics, legitimacy, science, religion, and denial--all of these elements commonly…

Preliminary Facies Reconstruction of a Late Pleistocene Cypress Forest Discovered on the Northern Gulf of Mexico Continental Shelf

NASA Astrophysics Data System (ADS)

Gonzalez Rodriguez, S. M.; Bentley, S. J.; DeLong, K. L.; Xu, K.; Caporaso, A.; Obelcz, J. B.; Harley, G. L.; Reese, C. A.; Truong, J. T.

2016-12-01

We are investigating the origin and preservation of an ancient bald cypress forest (Taxodium distichum) discovered on the continental shelf seafloor, offshore of Gulf Shores, Alabama, USA, in 20 m water depth. The forest was likely buried in the late Pleistocene, possibly exhumed by Hurricane Ivan in 2004, and is now exposed as stumps in life position with little evidence of decay before recent marine exposure. Radiocarbon analyses show that the forest age is near (and in some cases beyond) the limits of 14C dating, at least 41-45 ky BP. In August 2015 and July 2016, submersible vibracores (up to 5 m in length) were collected. Ongoing core analyses include: organic content (loss on ignition), granulometry, and core logging using a Geotek Multi Sensor Core Logger to generate imagery, bulk density, and x-ray fluorescence data. To bolster 14C analyses, cores collected in 2016 are presently being dated using optically stimulated luminescence. Local stratigraphy consists of a surface facies of Holocene transgressive sands, underlain by possible estuarine sediments of interbedded sand and mud (potentially Holocene or Pleistocene), overlying a swamp or delta plain facies (likely Pleistocene) containing woody debris and mud. Deeper woody facies are thought to include the soil horizons of the ancient cypress forest. Cores collected in 2016 revealed a Pleistocene paleosol beneath Holocene sands in a nearby trough. Elevation differences between swamp and paleosol horizons will be evaluated from bathymetric and subbottom data, to help characterize the preserved ancient landscape. Initial interpretation based on close proximity of Pleistocene swamp and oxidized paleosol sediments, and regional geomorphic gradients suggest that this relatively diverse assemblage of facies developed up to tens of km from the glacial-age coastline, and relatively rapid burial prevented erosion by coastal processes during the Holocene transgression thus preserving the tree stumps and wood debris.

A study of the periodontal state of a late Medieval United Kingdom population.

PubMed

Gonçalves, Pedro César Gaspar; Griffiths, Gareth; Rawlinson, Andrew

2015-12-01

To study the severity of bone loss in a Medieval UK population, and compare this with other ancient UK populations from different time periods. Skulls from a burial site in York (XI-XV century) were investigated. Skulls with a minimum of 17 teeth were included and were divided from childhood into five age groups. Direct measurements from the cement enamel junction (CEJ) to the alveolar crest (AC) were undertaken at six points around each tooth with a UNC 15 probe. The mean bone loss was calculated for each tooth type. Seventy five skulls were included in the study (12-60 years of age). Bone loss was found to increase with age, but stabilized in older individuals (>45 years). The mean CEJ-AC distance varied from 2.1mm in the youngest group to a maximum of 4.1mm in 36-45 year olds. Results were compared with a Roman-British population (Whittaker et al., 1982) where comparable values for mean bone loss were 2.2mm and 5.4mm respectively, and a population of XVIII century Londoners (Whittaker et al., 1998) where bone loss of 1.1mm and 4.0mm was reported for the youngest and oldest age groups respectively. Measuring the CEJ-AC distance in dried skulls from ancient populations may be used as a proxy for the levels of periodontal disease irrespective of tooth wear. The findings from the current study suggest that the severity of periodontitis as determined by measurements of alveolar bone loss on dried skulls from this ancient population, seems to have declined in the United Kingdom from the III-V century to XVIII century. This may be due to changes in environmental factors including living conditions and diet, together with individual characteristics including systemic illness and genetic make up. Copyright © 2015. Published by Elsevier Ltd.

Natural selection and infectious disease in human populations

PubMed Central

Karlsson, Elinor K.; Kwiatkowski, Dominic P.; Sabeti, Pardis C.

2015-01-01

The ancient biological 'arms race' between microbial pathogens and humans has shaped genetic variation in modern populations, and this has important implications for the growing field of medical genomics. As humans migrated throughout the world, populations encountered distinct pathogens, and natural selection increased the prevalence of alleles that are advantageous in the new ecosystems in both host and pathogens. This ancient history now influences human infectious disease susceptibility and microbiome homeostasis, and contributes to common diseases that show geographical disparities, such as autoimmune and metabolic disorders. Using new high-throughput technologies, analytical methods and expanding public data resources, the investigation of natural selection is leading to new insights into the function and dysfunction of human biology. PMID:24776769

Experimental assessment of critical anthropogenic sediment burial in eelgrass Zostera marina.

PubMed

Munkes, Britta; Schubert, Philipp R; Karez, Rolf; Reusch, Thorsten B H

2015-11-15

Seagrass meadows, one of the world's most important and productive coastal habitats, are threatened by a range of anthropogenic actions. Burial of seagrass plants due to coastal activities is one important anthropogenic pressure leading to the decline of local populations. In our study, we assessed the response of eelgrass Zostera marina to sediment burial from physiological, morphological, and population parameters. In a full factorial field experiment, burial level (5-20cm) and burial duration (4-16weeks) were manipulated. Negative effects were visible even at the lowest burial level (5cm) and shortest duration (4weeks), with increasing effects over time and burial level. Buried seagrasses showed higher shoot mortality, delayed growth and flowering and lower carbohydrate storage. The observed effects will likely have an impact on next year's survival of buried plants. Our results have implications for the management of this important coastal plant. Copyright © 2015 Elsevier Ltd. All rights reserved.

77 FR 35114 - Agency Information Collection (NCA PreNeed Burial Planning) Activity Under OMB Review

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-12

...Need Burial Planning) Activity Under OMB Review AGENCY: National Cemetery Administration, Department of... PreNeed Burial Planning, VA Form 40-10007. OMB Control Number: 2900--New. Type of Review: New... members, and their eligible family members with planning for burial in a VA national cemetery. This...

The oxygen content of ocean bottom waters, the burial efficiency of organic carbon, and the regulation of atmospheric oxygen

NASA Technical Reports Server (NTRS)

Betts, J. N.; Holland, H. D.

1991-01-01

Data for the burial efficiency of organic carbon with marine sediments have been compiled for 69 locations. The burial efficiency as here defined is the ratio of the quantity of organic carbon which is ultimately buried to that which reaches the sediment-water interface. As noted previously, the sedimentation rate exerts a dominant influence on the burial efficiency. The logarithm of the burial efficiency is linearly related to the logarithm of the sedimentation rate at low sedimentation rates. At high sedimentation rates the burial efficiency can exceed 50% and becomes nearly independent of the sedimentation rate. The residual of the burial efficiency after the effect of the sedimentation rate has been subtracted is a weak function of the O2 concentration in bottom waters. The scatter is sufficiently large, so that the effect of the O2 concentration in bottom waters on the burial efficiency of organic matter could be either negligible or a minor but significant part of the mechanism that controls the level of O2 in the atmosphere.

[Outline of the history of caesarean section – from ancient times to the end of 17th Century].

PubMed

Torbé, Andrzej; Ustianowski, Przemysław; Ustianowska, Maria; Celewicz, Zbigniew; Torbé, Dorota

Problems with the childbirth accompanied the human civilization since its beginning. From the ancient times, physicians and other people specializing in healing, tried to help women in this special moment of life. At the base of this exceptional meaning of childbirth for humans lies the fact, that if something is going wrong there are two victims - mother and the child. As a result, many times there had been very dramatic attempts of help in this the most difficult journey which in his life every man is undergoing. In this paper a comprehensive review of literature about the history of caesarean section from ancient times to the end of 17th century was done.

Urban Stream Burial Increases Watershed-Scale Nitrate Export.

PubMed

Beaulieu, Jake J; Golden, Heather E; Knightes, Christopher D; Mayer, Paul M; Kaushal, Sujay S; Pennino, Michael J; Arango, Clay P; Balz, David A; Elonen, Colleen M; Fritz, Ken M; Hill, Brian H

2015-01-01

Nitrogen (N) uptake in streams is an important ecosystem service that reduces nutrient loading to downstream ecosystems. Here we synthesize studies that investigated the effects of urban stream burial on N-uptake in two metropolitan areas and use simulation modeling to scale our measurements to the broader watershed scale. We report that nitrate travels on average 18 times farther downstream in buried than in open streams before being removed from the water column, indicating that burial substantially reduces N uptake in streams. Simulation modeling suggests that as burial expands throughout a river network, N uptake rates increase in the remaining open reaches which somewhat offsets reduced N uptake in buried reaches. This is particularly true at low levels of stream burial. At higher levels of stream burial, however, open reaches become rare and cumulative N uptake across all open reaches in the watershed rapidly declines. As a result, watershed-scale N export increases slowly at low levels of stream burial, after which increases in export become more pronounced. Stream burial in the lower, more urbanized portions of the watershed had a greater effect on N export than an equivalent amount of stream burial in the upper watershed. We suggest that stream daylighting (i.e., uncovering buried streams) can increase watershed-scale N retention.

Urban Stream Burial Increases Watershed-Scale Nitrate Export

PubMed Central

Beaulieu, Jake J.; Golden, Heather E.; Knightes, Christopher D.; Mayer, Paul M.; Kaushal, Sujay S.; Pennino, Michael J.; Arango, Clay P.; Balz, David A.; Elonen, Colleen M.; Fritz, Ken M.; Hill, Brian H.

2015-01-01

Nitrogen (N) uptake in streams is an important ecosystem service that reduces nutrient loading to downstream ecosystems. Here we synthesize studies that investigated the effects of urban stream burial on N-uptake in two metropolitan areas and use simulation modeling to scale our measurements to the broader watershed scale. We report that nitrate travels on average 18 times farther downstream in buried than in open streams before being removed from the water column, indicating that burial substantially reduces N uptake in streams. Simulation modeling suggests that as burial expands throughout a river network, N uptake rates increase in the remaining open reaches which somewhat offsets reduced N uptake in buried reaches. This is particularly true at low levels of stream burial. At higher levels of stream burial, however, open reaches become rare and cumulative N uptake across all open reaches in the watershed rapidly declines. As a result, watershed-scale N export increases slowly at low levels of stream burial, after which increases in export become more pronounced. Stream burial in the lower, more urbanized portions of the watershed had a greater effect on N export than an equivalent amount of stream burial in the upper watershed. We suggest that stream daylighting (i.e., uncovering buried streams) can increase watershed-scale N retention. PMID:26186731

Peopling the past: New perspectives on the ancient Maya

PubMed Central

Robin, Cynthia

2001-01-01

The new direction in Maya archaeology is toward achieving a greater understanding of people and their roles and their relations in the past. To answer emerging humanistic questions about ancient people's lives Mayanists are increasingly making use of new and existing scientific methods from archaeology and other disciplines. Maya archaeology is bridging the divide between the humanities and sciences to answer questions about ancient people previously considered beyond the realm of archaeological knowledge. PMID:11136245

Endocrinology in ancient Sparta.

PubMed

Tsoulogiannis, Ioannis N; Spandidos, Demetrios A

2007-01-01

This article attempts to analyze the crucial link between the plant Agnus castus and human health, particularly hormonal status, with special reference to the needs of the society of ancient Sparta. The ancient Spartans used Agnus both as a cure for infertility and as a remedy to treat battle wounds. These special properties were recognized by the sanctuary of Asclepios Agnita, which was located in Sparta, as well as by medical practitioners in Sparta during the classical, Hellenistic and Roman ages.

Investigation and simulation on fate and transport of leachate from a livestock mortality burial site

NASA Astrophysics Data System (ADS)

Lim, J.-W.; Lee, S.; Kaown, D.; Lee, K.-K.

2012-04-01

Leachate released from livestock mortality burial during decomposition of carcasses can be a threat to groundwater quality. Monitoring study of groundwater quality in the vicinity of livestock burial reported that a caution is needed to prevent contamination of both groundwater and soil, especially in case of mortality burial (Glanville, 2000; Ritter and Chirnside, 1995). The average concentration of ammonium-N and chloride is reported to be 12,600 mg/l and 2,600 mg/l respectively, which is 2-4 times higher than leachate from earthen manure storages and landfills (Pratt, 2009). To assess the potential threat of burial leachate to groundwater quality, simulation of leachate transport is performed based on a hydrogeologic model of an actual mortality burial site. At the burial site of this study located at a hill slope, two mortality pits have been constructed along the slope to bury swine during the outbreak of nationwide foot and mouth disease(FMD) in 2011. Though the pits were partially lined with impermeable material, potential threat of leachate leakage is still in concern. Electrical resistivity survey has been performed several times at the burial site and abnormal resistivity zones have been detected which are supposed as leachate leakage from the burial. Subsurface model including unsaturated zone is built since the leakage is supposed to occur mainly in lateral of the burial pits which is in unsaturated zone. When examining leachate transport, main focus is given to a nitrogenous compound and colloidal character of FMD virus. Nitrifying of denitrifying characters of nitrogenous compound and transport of colloidal particles are affected mainly by soil water content in unsaturated zone. Thus, the fate and transport of burial leachate affected by seasonal variation in recharge pattern is investigated.

A molecular portrait of maternal sepsis from Byzantine Troy

PubMed Central

Devault, Alison M; Mortimer, Tatum D; Kitchen, Andrew; Kiesewetter, Henrike; Enk, Jacob M; Golding, G Brian; Southon, John; Kuch, Melanie; Duggan, Ana T; Aylward, William; Gardner, Shea N; Allen, Jonathan E; King, Andrew M; Wright, Gerard; Kuroda, Makoto; Kato, Kengo; Briggs, Derek EG; Fornaciari, Gino; Holmes, Edward C; Poinar, Hendrik N; Pepperell, Caitlin S

2017-01-01

Pregnancy complications are poorly represented in the archeological record, despite their importance in contemporary and ancient societies. While excavating a Byzantine cemetery in Troy, we discovered calcified abscesses among a woman’s remains. Scanning electron microscopy of the tissue revealed ‘ghost cells’, resulting from dystrophic calcification, which preserved ancient maternal, fetal and bacterial DNA of a severe infection, likely chorioamnionitis. Gardnerella vaginalis and Staphylococcus saprophyticus dominated the abscesses. Phylogenomic analyses of ancient, historical, and contemporary data showed that G. vaginalis Troy fell within contemporary genetic diversity, whereas S. saprophyticus Troy belongs to a lineage that does not appear to be commonly associated with human disease today. We speculate that the ecology of S. saprophyticus infection may have differed in the ancient world as a result of close contacts between humans and domesticated animals. These results highlight the complex and dynamic interactions with our microbial milieu that underlie severe maternal infections. DOI: http://dx.doi.org/10.7554/eLife.20983.001 PMID:28072390

Identification and Tracing Groundwater Contamination by Livestock Burial Sites

NASA Astrophysics Data System (ADS)

Ko, K.; Ha, K.; Park, S.; Kim, Y.; Lee, K.

2011-12-01

Foot-and-mouth disease (FMD) or hoof-and-mouth disease is a severe plague for animal farming that affects cloven-hoofed animals such as cattle, pigs, sheep, and goats. Since it is highly infectious and can be easily proliferated by infected animals, contaminated equipments, vehicles, clothing, people, and predators. It is widely known that the virus responsible for FMD is a picornavirus, the prototypic member of the genus Aphthovirus. A serious outbreak of foot-and-mouth disease, leading to the stamping out of 3.53 millions of pigs and cattle and the construction of 4,538 burial sites until 15th March, 2011. The build-up of carcass burial should inevitably produce leachate by the decomposition of buried livestock affecting the surround environment such as air, soil, groundwater, and surface water. The most important issues which are currently raised by scientists are groundwater contamination by leachate from the livestock burial sites. This study examined the current status of FMD outbreak occurred in 2010-2011 and the issues of groundwater contamination by leachate from livestock burial sites. The hydrogeochemical, geophysical, and hydrogeological studies were executed to identify and trace groundwater contamination by leachate from livestock burial sites. Generally livestock mortality leachate contains high concentrations of NH3-N, HCO3-, Cl-, SO42-, K+, Na+, P along with relative lesser amounts of iron, calcium, and magnesium. The groundwater chemical data around four burial sites showed high NH3-N, HCO3-, and K+ suggesting the leachate leakage from burial sites. This is also proved by resistivity monitoring survey and tracer tests. The simulation results of leachate dispersion showed the persistent detrimental impacts for groundwater environment for a long time (~50 years). It is need to remove the leachate of burial sites to prevent the dispersion of leachate from livestock burial to groundwater and to monitor the groundwater quality. The most important forthcoming issues for livestock burial are the treatment of leachate, protection of groundwater contamination by leachate, prevention of land slide, and prevention of rainfall percolation into burial site. It is also needed to develop the remediation, prospecting, and management technologies of groundwater contamination by carcass burial.

Sediment Burial Intolerance of Marine Macroinvertebrates.

PubMed

Hendrick, Vicki J; Hutchison, Zoë L; Last, Kim S

2016-01-01

The marine environment contains suspended particulate matter which originates from natural and anthropogenic sources. Settlement of this material can leave benthic organisms susceptible to smothering, especially if burial is sudden i.e. following storms or activities such as dredging. Their survival will depend on their tolerance to, and their ability to escape from burial. Here we present data from a multi-factorial experiment measuring burial responses incorporating duration, sediment fraction and depth. Six macroinvertebrates commonly found in sediment rich environments were selected for their commercial and/or conservation importance. Assessments revealed that the brittle star (Ophiura ophiura), the queen scallop (Aequipecten opercularis) and the sea squirt (Ciona intestinalis) were all highly intolerant to burial whilst the green urchin (Psammichinus miliaris) and the anemone (Sagartiogeton laceratus), showed intermediate and low intolerance respectively, to burial. The least intolerant, with very high survival was the Ross worm (Sabellaria spinulosa). With the exception of C. intestinalis, increasing duration and depth of burial with finer sediment fractions resulted in increased mortality for all species assessed. For C. intestinalis depth of burial and sediment fraction were found to be inconsequential since there was complete mortality of all specimens buried for more than one day. When burial emergence was assessed O. ophiura emerged most frequently, followed by P. miliaris. The former emerged most frequently from the medium and fine sediments whereas P. miliaris emerged more frequently from coarse sediment. Both A. opercularis and S. laceratus showed similar emergence responses over time, with A. opercularis emerging more frequently under coarse sediments. The frequency of emergence of S. laceratus increased with progressively finer sediment and C. intestinalis did not emerge from burial irrespective of sediment fraction or depth. Finally, and perhaps unsurprisingly, the greatest ability to emerge from burial in all other species was from shallow (2 cm) burial. Although survival was consistently highly dependent on duration and depth of burial as expected, emergence behaviour was not as easily predictable thereby confounding predictions. We conclude that responses to burial are highly species specific and therefore tolerance generalisations are likely to be oversimplifications. These data may be used to inform environmental impact models that allow forecasting of the cumulative impacts of seabed disturbance and may provide mitigation measures for the sustainable use of the seabed.

Effects of sediment burial disturbance on macro and microelement dynamics in decomposing litter of Phragmites australis in the coastal marsh of the Yellow River estuary, China.

PubMed

Sun, Zhigao; Mou, Xiaojie

2016-03-01

From April 2008 to November 2009, a field decomposition experiment was conducted to investigate the effects of sediment burial on macro (C, N) and microelement (Pb, Cr, Cu, Zn, Ni, and Mn) variations in decomposing litter of Phragmites australis in the coastal marsh of the Yellow River estuary. Three one-off sediment burial treatments [no sediment burial (0 mm year(-1), S0), current sediment burial (100 mm year(-1), S10), and strong sediment burial (200 mm year(-1), S20)] were laid in different decomposition sites. Results showed that sediment burials showed significant influence on the decomposition rate of P. australis, in the order of S10 (0.001990 day(-1)) ≈ S20 (0.001710 day(-1)) > S0 (0.000768 day(-1)) (p < 0.05). The macro and microelement in decomposing litters of the three burial depths exhibited different temporal variations except for Cu, Zn, and Ni. No significant differences in C, N, Pb, Cr, Zn, and Mn concentrations were observed among the three burial treatments except for Cu and Ni (p > 0.05). With increasing burial depth, N, Cr, Cu, Ni, and Mn concentrations generally increased, while C, Pb, and Zn concentrations varied insignificantly. Sediment burial was favorable for C and N release from P. australis, and, with increasing burial depth, the C release from litter significantly increased, and the N in litter shifted from accumulation to release. With a few exceptions, Pb, Cr, Zn, and Mn stocks in P. australis in the three treatments evidenced the export of metals from litter to environment, and, with increasing burial depth, the export amounts increased greatly. Stocks of Cu and Ni in P. australis in the S10 and S20 treatments were generally positive, evidencing incorporation of the two metals in most sampling times. Except for Ni, the variations of C, N, Pb, Cr, Cu, Zn, and Mn stocks in P. australis in the S10 and S20 treatments were approximated, indicating that the strong burial episodes (S20) occurred in P. australis marsh in the future would have little influence on the stocks of these elements. With increasing burial depths, the P. australis was particularly efficient in binding Cu and Ni and releasing C, N, Pb, Cr, Zn, and Mn, implying that the potential eco-toxic risk of Pb, Cr, Zn, and Mn exposure might be very serious. This study emphasized the effects of different burials on nutrient and metal cycling and mass balance in the P. australis marsh of the Yellow River estuary.

Like a pig out of water: seaborne spread of domestic pigs in Southern Italy and Sardinia during the Bronze and Iron Ages

PubMed Central

Lega, C; Fulgione, D; Genovese, A; Rook, L; Masseti, M; Meiri, M; Cinzia Marra, A; Carotenuto, F; Raia, P

2017-01-01

Southern Italy has a long history of human occupation and passage of different cultures since the Early Holocene. Repeated, ancient introductions of pigs in several geographic areas in Europe make it difficult to understand pig translocation and domestication in Italy. The archeozoological record may provide fundamental information on this, hence shedding light on peopling and on trading among different ancient cultures in the Mediterranean. Yet, because of the scanty nature of the fossil record, ancient remains from human-associated animals are somewhat rare. Fortunately, ancient DNA analysis as applied to domestic species proved to be a powerful tool in revealing human migrations. Herein, we analyzed 80-bp fragment of mitochondrial DNA control region from 27 Sus scrofa ancient samples retrieved from Southern Italian and Sardinian archeological sites, spanning in age from the Mesolithic to the Roman period. Our results surprisingly indicate the presence of the Near Eastern haplotype Y1 on both Italy's major islands (Sardinia and Sicily) during the Bronze Age, suggesting the seaborne transportation of domestic pigs by humans at least during 1600–1300 BC. The presence of the Italian E2 clade in domestic contexts shows that the indigenous wild boar was effectively domesticated or incorporated into domestic stocks in Southern Italy during the Bronze Age, although the E2 haplotype has never been found in modern domestic breeds. Pigs belonging to the endemic E2 clade were thus traded between the Peninsula and Sardinia by the end of the second millennium BC and this genetic signature is still detected in Sardinian feral pigs. PMID:27649620

The impact of the Cretaceous-Paleogene (K-Pg) mass extinction event on the global sulfur cycle: Evidence from Seymour Island, Antarctica

NASA Astrophysics Data System (ADS)

Witts, James D.; Newton, Robert J.; Mills, Benjamin J. W.; Wignall, Paul B.; Bottrell, Simon H.; Hall, Joanna L. O.; Francis, Jane E.; Alistair Crame, J.

2018-06-01

The Cretaceous-Paleogene (K-Pg) mass extinction event 66 million years ago led to large changes to the global carbon cycle, primarily via a decrease in primary or export productivity of the oceans. However, the effects of this event and longer-term environmental changes during the Late Cretaceous on the global sulfur cycle are not well understood. We report new carbonate associated sulfate (CAS) sulfur isotope data derived from marine macrofossil shell material from a highly expanded high latitude Maastrichtian to Danian (69-65.5 Ma) succession located on Seymour Island, Antarctica. These data represent the highest resolution seawater sulfate record ever generated for this time interval, and are broadly in agreement with previous low-resolution estimates for the latest Cretaceous and Paleocene. A vigorous assessment of CAS preservation using sulfate oxygen, carbonate carbon and oxygen isotopes and trace element data, suggests factors affecting preservation of primary seawater CAS isotopes in ancient biogenic samples are complex, and not necessarily linked to the preservation of original carbonate mineralogy or chemistry. Primary data indicate a generally stable sulfur cycle in the early-mid Maastrichtian (69 Ma), with some fluctuations that could be related to increased pyrite burial during the 'mid-Maastrichtian Event'. This is followed by an enigmatic +4‰ increase in δ34SCAS during the late Maastrichtian (68-66 Ma), culminating in a peak in values in the immediate aftermath of the K-Pg extinction which may be related to temporary development of oceanic anoxia in the aftermath of the Chicxulub bolide impact. There is no evidence of the direct influence of Deccan volcanism on the seawater sulfate isotopic record during the late Maastrichtian, nor of a direct influence by the Chicxulub impact itself. During the early Paleocene (magnetochron C29R) a prominent negative excursion in seawater δ34S of 3-4‰ suggests that a global decline in organic carbon burial related to collapse in export productivity, also impacted the sulfur cycle via a significant drop in pyrite burial. Box modelling suggests that to achieve an excursion of this magnitude, pyrite burial must be reduced by >15%, with a possible role for a short term increase in global weathering rates. Recovery of the sulfur cycle to pre-extinction values occurs at the same time (∼320 kyrs) as initial carbon cycle recovery globally. These recoveries are also contemporaneous with an initial increase in local alpha diversity of marine macrofossil faunas, suggesting biosphere-geosphere links during recovery from the mass extinction. Modelling further indicates that concentrations of sulfate in the oceans must have been 2 mM, lower than previous estimates for the Late Cretaceous and Paleocene and an order of magnitude lower than today.

Ancient Resistome.

PubMed

Olaitan, Abiola Olumuyiwa; Rolain, Jean-Marc

2016-08-01

Antibiotic resistance is an ancient biological mechanism in bacteria, although its proliferation in our contemporary world has been amplified through antimicrobial therapy. Recent studies conducted on ancient environmental and human samples have uncovered numerous antibiotic-resistant bacteria and resistance genes. The resistance genes that have been reported from the analysis of ancient bacterial DNA include genes coding for several classes of antibiotics, such as glycopeptides, β-lactams, tetracyclines, and macrolides. The investigation of the resistome of ancient bacteria is a recent and emerging field of research, and technological advancements such as next-generation sequencing will further contribute to its growth. It is hoped that the knowledge gained from this research will help us to better understand the evolution of antibiotic resistance genes and will also be used in drug design as a proactive measure against antibiotic resistance.

Endogenous change: on cooperation and water in ancient history

NASA Astrophysics Data System (ADS)

Pande, S.; Ertsen, M.

2013-04-01

We propose and test the theory of endogenous change based on historical reconstructions of two ancient civilizations, Indus and Hohokam, in two water scarce basins, the Indus basin in the Indian subcontinent and the Lower Colorado basin in Southwestern United States. The endogenous institutional change sees changes in institutions as a sequence of equilibria brought about by changes in "quasi-parameters" such as rainfall, population density, soil and land use induced water resource availability. In the historical reconstructions of ancient civilizations, institutions are proximated by the scale of cooperation be it in the form of the extent of trade, sophisticated irrigation network, a centrally planned state or a loosely held state with a common cultural identity. The "quasi-parameters" either change naturally or are changed by humans and the changes affect the stability of cooperative structures over time. However, human influenced changes in the quasi-parameters itself are conditioned on the scale of existing cooperative structures. We thus provide insights into the quantitative dimensions of water access by ancient populations and its co-evolution with the socioeconomic and sociopolitical organization of the human past. We however do not suggest that water manipulation was the single most significant factor in stimulating social development and complexity - clearly this has been shown as highly reductionist, even misleading. The paper cautiously contributes to proximate prediction of hydrological change by attempting to understand the complexity of coupled human-hydrological systems.

Ancient HTLV type 1 provirus DNA of Andean mummy.

PubMed

Sonoda, S; Li, H C; Cartier, L; Nunez, L; Tajima, K

2000-11-01

The worldwide geographic and ethnic clustering of patients with diseases related to human T cell lymphotropic virus type 1 (HTLV-1) may be explained by the natural history of HTLV-1 infection. The genetic characteristics of indigenous people in the Andes are similar to those of the Japanese, and HTLV-1 is generally detected in both groups. To clarify the common origin of HTLV-1 in Asia and the Andes, we analyzed HTLV-1 provirus DNA from Andean mummies about 1500 years old. Two of 104 mummy bone marrow specimens yielded a band of human beta-globin gene DNA 110 base pairs in length, and one of these two produced bands of HTLV-1-pX (open reading frame encoding p(40x), p(27x)) and HTLV-1-LTR (long terminal repeat) gene DNA 159 base pairs and 157 base pairs in length, respectively. The nucleotide sequences of ancient HTLV-1-pX and HTLV-1-LTR clones isolated from mummy bone marrow were similar to those in contemporary Andeans and Japanese, although there was microheterogeneity in the sequences of some mummy DNA clones. This result provides evidence that HTLV-1 was carried with ancient Mongoloids to the Andes before the Colonial era. Analysis of ancient HTLV-1 sequences could be a useful tool for studying the history of human retroviral infection as well as human prehistoric migration.

40 CFR 229.1 - Burial at sea.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Burial at sea. 229.1 Section 229.1... Burial at sea. (a) All persons subject to title I of the Act are hereby granted a general permit to... location for the purpose of burial at sea and to bury such remains at sea subject to the -following...

40 CFR 229.1 - Burial at sea.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 25 2011-07-01 2011-07-01 false Burial at sea. 229.1 Section 229.1... Burial at sea. (a) All persons subject to title I of the Act are hereby granted a general permit to... location for the purpose of burial at sea and to bury such remains at sea subject to the -following...

40 CFR 229.1 - Burial at sea.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 25 2014-07-01 2014-07-01 false Burial at sea. 229.1 Section 229.1... Burial at sea. (a) All persons subject to title I of the Act are hereby granted a general permit to... location for the purpose of burial at sea and to bury such remains at sea subject to the -following...

40 CFR 229.1 - Burial at sea.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 26 2013-07-01 2013-07-01 false Burial at sea. 229.1 Section 229.1... Burial at sea. (a) All persons subject to title I of the Act are hereby granted a general permit to... location for the purpose of burial at sea and to bury such remains at sea subject to the -following...

40 CFR 229.1 - Burial at sea.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 26 2012-07-01 2011-07-01 true Burial at sea. 229.1 Section 229.1... Burial at sea. (a) All persons subject to title I of the Act are hereby granted a general permit to... location for the purpose of burial at sea and to bury such remains at sea subject to the -following...

78 FR 76574 - Burial Benefits

Federal Register 2010, 2011, 2012, 2013, 2014

2013-12-18

...The Department of Veterans Affairs (VA) proposes to clarify, reorganize, and rewrite in plain language its regulations that govern entitlement to monetary burial benefits, which include burial allowances for service-connected and non-service-connected deaths, a plot or interment allowance, and reimbursement of transportation expenses. The amendments would also establish rules to support VA's automated payment of burial allowances to surviving spouses, conversion to flat-rate burial and plot or interment allowances that are equal to the maximum benefit authorized by law, and priority of payment to non- spouse survivors.

Cleanup Verification Package for the 118-F-1 Burial Ground

DOE Office of Scientific and Technical Information (OSTI.GOV)

E. J. Farris and H. M. Sulloway

2008-01-10

This cleanup verification package documents completion of remedial action for the 118-F-1 Burial Ground on the Hanford Site. This burial ground is a combination of two locations formerly called Minor Construction Burial Ground No. 2 and Solid Waste Burial Ground No. 2. This waste site received radioactive equipment and other miscellaneous waste from 105-F Reactor operations, including dummy elements and irradiated process tubing; gun barrel tips, steel sleeves, and metal chips removed from the reactor; filter boxes containing reactor graphite chips; and miscellaneous construction solid waste.

48 CFR 837.7003 - Funeral authorization.

Code of Federal Regulations, 2013 CFR

2013-10-01

... be of sufficient strength to support the weight of an adult human body. Cardboard or press paper or... provided. The services must consist of the following: (1) Preparation of the body, embalming. (2) Clothing...) accompanies the casket to the place of burial. (c) An additional allowance for transportation of the body to...

48 CFR 837.7003 - Funeral authorization.

Code of Federal Regulations, 2012 CFR

2012-10-01

... be of sufficient strength to support the weight of an adult human body. Cardboard or press paper or... provided. The services must consist of the following: (1) Preparation of the body, embalming. (2) Clothing...) accompanies the casket to the place of burial. (c) An additional allowance for transportation of the body to...

48 CFR 837.7003 - Funeral authorization.

Code of Federal Regulations, 2014 CFR

2014-10-01

... be of sufficient strength to support the weight of an adult human body. Cardboard or press paper or... provided. The services must consist of the following: (1) Preparation of the body, embalming. (2) Clothing...) accompanies the casket to the place of burial. (c) An additional allowance for transportation of the body to...

48 CFR 837.7003 - Funeral authorization.

Code of Federal Regulations, 2011 CFR

2011-10-01

... be of sufficient strength to support the weight of an adult human body. Cardboard or press paper or... provided. The services must consist of the following: (1) Preparation of the body, embalming. (2) Clothing...) accompanies the casket to the place of burial. (c) An additional allowance for transportation of the body to...

48 CFR 837.7003 - Funeral authorization.

Code of Federal Regulations, 2010 CFR

2010-10-01

... be of sufficient strength to support the weight of an adult human body. Cardboard or press paper or... provided. The services must consist of the following: (1) Preparation of the body, embalming. (2) Clothing...) accompanies the casket to the place of burial. (c) An additional allowance for transportation of the body to...

Seeking carotenoid pigments in amber-preserved fossil feathers.

PubMed

Thomas, Daniel B; Nascimbene, Paul C; Dove, Carla J; Grimaldi, David A; James, Helen F

2014-06-09

Plumage colours bestowed by carotenoid pigments can be important for visual communication and likely have a long evolutionary history within Aves. Discovering plumage carotenoids in fossil feathers could provide insight into the ecology of ancient birds and non-avian dinosaurs. With reference to a modern feather, we sought chemical evidence of carotenoids in six feathers preserved in amber (Miocene to mid-Cretaceous) and in a feather preserved as a compression fossil (Eocene). Evidence of melanin pigmentation and microstructure preservation was evaluated with scanning electron and light microscopies. We observed fine microstructural details including evidence for melanin pigmentation in the amber and compression fossils, but Raman spectral bands did not confirm the presence of carotenoids in them. Carotenoids may have been originally absent from these feathers or the pigments may have degraded during burial; the preservation of microstructure may suggest the former. Significantly, we show that carotenoid plumage pigments can be detected without sample destruction through an amber matrix using confocal Raman spectroscopy.

Earliest evidence for equid bit wear in the ancient Near East: The "ass" from Early Bronze Age Tell eṣ-Ṣâfi/Gath, Israel

PubMed Central

Shai, Itzhaq; Greenfield, Tina L.; Arnold, Elizabeth R.; Brown, Annie; Eliyahu, Adi; Maeir, Aren M.

2018-01-01

Analysis of a sacrificed and interred domestic donkey from an Early Bronze Age (EB) IIIB (c. 2800–2600 BCE) domestic residential neighborhood at Tell eṣ-Ṣâfi/Gath, Israel, indicate the presence of bit wear on the Lower Premolar 2 (LPM2). This is the earliest evidence for the use of a bit among early domestic equids, and in particular donkeys, in the Near East. The mesial enamel surfaces on both the right and left LPM2 of the particular donkey in question are slightly worn in a fashion that suggests that a dental bit (metal, bone, wood, etc.) was used to control the animal. Given the secure chronological context of the burial (beneath the floor of an EB IIIB house), it is suggested that this animal provides the earliest evidence for the use of a bit on an early domestic equid from the Near East. PMID:29768439

Earliest evidence for equid bit wear in the ancient Near East: The "ass" from Early Bronze Age Tell eṣ-Ṣâfi/Gath, Israel.

PubMed

Greenfield, Haskel J; Shai, Itzhaq; Greenfield, Tina L; Arnold, Elizabeth R; Brown, Annie; Eliyahu, Adi; Maeir, Aren M

2018-01-01

Analysis of a sacrificed and interred domestic donkey from an Early Bronze Age (EB) IIIB (c. 2800-2600 BCE) domestic residential neighborhood at Tell eṣ-Ṣâfi/Gath, Israel, indicate the presence of bit wear on the Lower Premolar 2 (LPM2). This is the earliest evidence for the use of a bit among early domestic equids, and in particular donkeys, in the Near East. The mesial enamel surfaces on both the right and left LPM2 of the particular donkey in question are slightly worn in a fashion that suggests that a dental bit (metal, bone, wood, etc.) was used to control the animal. Given the secure chronological context of the burial (beneath the floor of an EB IIIB house), it is suggested that this animal provides the earliest evidence for the use of a bit on an early domestic equid from the Near East.

Seeking carotenoid pigments in amber-preserved fossil feathers

NASA Astrophysics Data System (ADS)

Thomas, Daniel B.; Nascimbene, Paul C.; Dove, Carla J.; Grimaldi, David A.; James, Helen F.

2014-06-01

Plumage colours bestowed by carotenoid pigments can be important for visual communication and likely have a long evolutionary history within Aves. Discovering plumage carotenoids in fossil feathers could provide insight into the ecology of ancient birds and non-avian dinosaurs. With reference to a modern feather, we sought chemical evidence of carotenoids in six feathers preserved in amber (Miocene to mid-Cretaceous) and in a feather preserved as a compression fossil (Eocene). Evidence of melanin pigmentation and microstructure preservation was evaluated with scanning electron and light microscopies. We observed fine microstructural details including evidence for melanin pigmentation in the amber and compression fossils, but Raman spectral bands did not confirm the presence of carotenoids in them. Carotenoids may have been originally absent from these feathers or the pigments may have degraded during burial; the preservation of microstructure may suggest the former. Significantly, we show that carotenoid plumage pigments can be detected without sample destruction through an amber matrix using confocal Raman spectroscopy.

The deterioration of Circular Mausoleum, Roman Necropolis of Carmona, Spain.

PubMed

Cañaveras, Juan C; Fernandez-Cortes, Angel; Elez, Javier; Cuezva, Soledad; Jurado, Valme; Miller, Ana Zelia; Rogerio-Candelera, Miguel A; Benavente, David; Hernandez-Marine, Mariona; Saiz-Jimenez, Cesareo; Sanchez-Moral, Sergio

2015-06-15

The Circular Mausoleum tomb in the Roman Necropolis of Carmona was carved on a calcarenite sequence in an ancient quarry located in the town of Carmona, Southern Spain. This rock-cut tomb, representative of Roman burial practices, currently suffers from serious deterioration. A detailed survey over several years permitted the identification of the main tomb's pathologies and damaging processes, which include loss of material (scaling, flaking, granular disintegration), surface modifications (efflorescences, crusts and deposits) and extensive biological colonization. The results obtained in this study indicated that anthropogenic changes were largely responsible and enhanced the main alteration mechanisms observed in the Circular Mausoleum. Based on the deterioration diagnosis, effective corrective actions were proposed. This study shows that any conservative intervention in the interior of the tomb should be preceded by accurate in situ measurements and laboratory analyses to ascribe the source of the deterioration damages and thus designing effective treatments. Copyright © 2015 Elsevier B.V. All rights reserved.

Attenuation of Glass Dissolution in the Presence of Natural Additives

NASA Technical Reports Server (NTRS)

Sang, Jing C.; Barkatt, Aaron; OKeefe, John A.

1993-01-01

The study described here explored the dissolution kinetics of glasses in aqueous environments in systems which included a variety of natural crystalline solids in addition to the glass itself and the aqueous phase. The results demonstrated the possibility of a dramatic decrease in the rate of dissolution of silicate glass in the presence of certain varieties of olivine-based materials. This decrease in dissolution rate was shown to be due to the fact that these additives consist mostly of Mg-based material but also contain minor amounts of Al and Ca. The combined presence of Mg with these minor species affected the corrosion rate of the glass as a whole, including its most soluble components such as boron. The study has potentially important implications to the durability of glasses exposed to natural environments. The results may be relevant to the use of active backfill materials in burial sites for nuclear waste glasses as well as to better understanding of the environmental degradation of natural and ancient glasses.

Cranial measures and ancient DNA both show greater similarity of Neandertals to recent modern Eurasians than to recent modern sub-Saharan Africans.

PubMed

Relethford, John H; Smith, Fred H

2018-05-01

Ancient DNA analysis has shown that present-day humans of Eurasian ancestry are more similar to Neandertals than are present-day humans of sub-Saharan African ancestry, reflecting interbreeding after modern humans first left Africa. We use craniometric data to test the hypothesis that the crania of recent modern humans show the same pattern. We computed Mahalanobis squared distances between a published Neandertal centroid based on 37 craniometric traits and each of 2,413 recent modern humans from the Howells global data set (N = 373 sub-Saharan Africans, N = 2,040 individuals of Eurasian descent). The average distance to the Neandertal centroid is significantly lower for Eurasian crania than for sub-Saharan African crania as expected from the findings of ancient DNA (p < 0.001). This result holds when examining distances for separate geographic regions of humans of Eurasian descent (Europeans, Asians, Australasians, Native Americans, and Pacific Islanders). Most of these results are also seen when examining distances partitioning size and shape variation. Our results show that the genetic difference in Neandertal ancestry seen in the DNA of present-day sub-Saharan Africans and Eurasians is also found in patterns of recent modern human craniometric variation. © 2018 Wiley Periodicals, Inc.

Cannibalism versus funerary defleshing and disarticulation after a period of decay: comparisons of bone modifications from four prehistoric sites.

PubMed

Bello, Silvia M; Wallduck, Rosalind; Dimitrijević, Vesna; Živaljević, Ivana; Stringer, Chris B

2016-12-01

Humanly induced modifications on human and non-human bones from four archaeological sites of known funerary rituals (one interpreted as cannibalism and three interpreted as funerary defleshing and disarticulation after a period of decay) were analyzed to ascertain whether macromorphological and micromorphological characteristics of cut marks can be used to distinguish cannibalistic from secondary burial practices. Four collections were analyzed: the Magdalenian assemblage from Gough's Cave (UK) and the Mesolithic-Neolithic bone samples from Lepenski Vir, Padina and Vlasac (Serbia). A total of 647 cut marks (345 on human and 302 on non-human remains) were imaged and measured using an optical surface measurement system, the Alicona InfiniteFocus, housed at the Natural History Museum (London, UK). The frequency of cut marks at Gough's Cave exceeds 65%, while it is below 1% in the Serbian sites, and no human tooth marks and only one case of percussion damage have been observed on the three Serbian collections. The distribution of cut marks on human bones is comparable in the four assemblages. Cannibalized human remains, however, present a uniform cut mark distribution, which can be associated with disarticulation of persistent and labile articulations, and the scalping and filleting of muscles. For secondary burials where modification occurred after a period of decay, disarticulation marks are less common and the disarticulation of labile joints is rare. The micromorphometric analyses of cut marks on human and non-human remains suggest that cut marks produced when cleaning partially decayed bodies are significantly different from cut marks produced during butchery of fresh bodies. A distinction between cannibalism and secondary treatment of human bodies can be made based on frequency, distribution and micromorphometric characteristics of cut marks. © 2016 Wiley Periodicals, Inc.

Burials from Wadi Mudayfa'at and Wadi Abu Khasharif, Southern Jordan - Results of a Survey and Salvage Excavations

NASA Astrophysics Data System (ADS)

Salameen, Zeyad al; Falahat, Hani

This paper presents the preliminary results of a survey and excavation conducted in 2006 on small cemeteries at Wadi Mudayfa'at and Wadi Abu Khasharif, which are located c. 30 km southeast of the village of al-Hussayniah on the Desert Highway in southern Jordan. In total five graves were excavated. Preservation was excellent including human and other organic materials (hair, leather, textiles). Preliminary scientific dating points to the period between the second and fourth centuries AD. The research questions discussed are: - the date, the relationship between the cemeteries and surrounding sites, the significance of this area, the identity of the groups buried, the burial techniques and practices adopted and what influenced them and the funerary gifts included with the dead.

Morphological preservation of carbonaceous plant fossils in blueschist metamorphic rocks from New Zealand.

PubMed

Galvez, M E; Beyssac, O; Benzerara, K; Bernard, S; Menguy, N; Cox, S C; Martinez, I; Johnston, M R; Brown, G E

2012-03-01

Morphological and chemical evidence of ancient life is widespread in sedimentary rocks retrieved from shallow depths in the Earth's crust. Metamorphism is highly detrimental to the preservation of biological information in rocks, thus limiting the geological record in which traces of life might be found. Deformation and increasing pressure/temperature during deep burial may alter the morphology as well as the composition and structure of both the organic and mineral constituents of fossils. However, microspore fossils have been previously observed in intensely metamorphosed rocks. It has been suggested that their small size, and/or the nature of the polymer composing their wall, and/or the mineralogy of their surrounding matrix were key parameters explaining their exceptional preservation. Here, we describe the remarkable morphological preservation of plant macrofossils in blueschist metamorphic rocks from New Zealand containing lawsonite. Leaves and stems can be easily identified at the macroscale. At the microscale, polygonal structures with walls mineralized by micas within the leaf midribs and blades may derive from the original cellular ultrastructure or, alternatively, from the shrinkage during burial of the gelified remnants of the leaves in an abiotic process. Processes and important parameters involved in the remarkable preservation of these fossils during metamorphism are discussed. Despite the excellent morphological preservation, the initial biological polymers have been completely transformed to graphitic carbonaceous matter down to the nanometer scale. This occurrence demonstrates that plant macrofossils may experience major geodynamic processes such as metamorphism and exhumation involving deep changes and homogenization of their carbon chemistry and structure but still retain their morphology with remarkable integrity even if they are not shielded by any hard-mineralized concretion. © 2012 Blackwell Publishing Ltd.

The Northern Gulf of Mexico During OAE2 and the Relationship Between Water Depth and Black Shale Development

NASA Astrophysics Data System (ADS)

Lowery, Christopher M.; Cunningham, Robert; Barrie, Craig D.; Bralower, Timothy; Snedden, John W.

2017-12-01

Despite their name, Oceanic Anoxic Events (OAEs) are not periods of uniform anoxia and black shale deposition in ancient oceans. Shelf environments account for the majority of productivity and organic carbon burial in the modern ocean, and this was likely true in the Cretaceous as well. However, it is unlikely that the mechanisms for such an increase were uniform across all shelf environments. Some, like the northwest margin of Africa, were characterized by strong upwelling, but what might drive enhanced productivity on shelves not geographically suited for upwelling? To address this, we use micropaleontology, carbon isotopes, and sedimentology to present the first record of Oceanic Anoxic Event 2 (OAE2) from the northern Gulf of Mexico shelf. Here OAE2 occurred during the deposition of the well-oxygenated, inner neritic/lower estuarine Lower Tuscaloosa Sandstone. The overlying organic-rich oxygen-poor Marine Tuscaloosa Shale is entirely Turonian in age. We trace organic matter enrichment from the Spinks Core into the deepwater Gulf of Mexico, where wireline log calculations and public geochemical data indicate organic enrichment and anoxia throughout the Cenomanian-Turonian boundary interval. Redox change and organic matter preservation across the Gulf of Mexico shelf were driven by sea level rise prior to the early Turonian highstand, which caused the advection of nutrient-rich, oxygen-poor waters onto the shelf. This results in organic matter mass accumulation rates 1-2 orders of magnitude lower than upwelling sites like the NW African margin, but it likely occurred over a much larger geographic area, suggesting that sea level rise was an important component of the overall increase in carbon burial during OAE2.

Preservation of carbonate clumped isotopes in sedimentary paleoclimate archives

NASA Astrophysics Data System (ADS)

Henkes, G. A.; Passey, B. H.; Grossman, E. L.; Shenton, B.; Perez-Huerta, A.

2014-12-01

Carbonate clumped isotope thermometry is increasingly used to reconstruct paleotemperatures of ancient terrestrial environments. One promising application is elucidating paleoelevation from carbonate archives such as paleosols, lacustrine marls, and fossil freshwater shells. Unlike conventional stable isotope approaches (e.g., mineral δ18O or δD), clumped isotope thermometry is independent of the isotopic composition of the precipitating waters and can therefore be used to reconstruct elevation by both the temperature-altitude relationship and the rainfall δ18O-altitude relationship. However, interpretation of clumped isotope data is not without its own complications. Like conventional stable isotopes, clumped isotope paleotemperatures can be effectively reset to warmer values by dissolution/reprecipitation-type diagenesis during sedimentary burial. It is also known that carbonate clumped isotope bonds (i.e., 13C-18O) are susceptible to 'reordering' in the solid mineral lattice at warmer burial temperatures, with laboratory studies of natural carbonates indicating activation of this phenomenon at temperatures as low as 100 °C over geologic timescales. A challenge in applying carbonate clumped isotope thermometry to natural samples is now evaluating terrestrial archives with respect to both types of alteration: 'open-system' alteration and 'closed-system' bond reordering. In this talk we will review our experimental efforts to constrain the kinetics of clumped isotope reordering, with relevance to low-temperature carbonates like fossil shells and early diagenetic minerals, and present new laboratory data that further inform our theoretical framework for the mechanism(s) of 13C-18O bond reordering. Together with traditional analytical and petrographic screening for recrystallization, empirical and laboratory studies of carbonate clumped isotope reordering represent the next steps in evaluating isotopic records of paleoclimate, paleobiology, and paleoelevation that are emerging from clumped isotope analyses.

Reconstruction of secular variation in seawater sulfate concentrations

NASA Astrophysics Data System (ADS)

Algeo, T. J.; Luo, G. M.; Song, H. Y.; Lyons, T. W.; Canfield, D. E.

2015-04-01

Long-term secular variation in seawater sulfate concentrations ([SO42-]SW) is of interest owing to its relationship to the oxygenation history of Earth's surface environment. In this study, we develop two complementary approaches for quantification of sulfate concentrations in ancient seawater and test their application to late Neoproterozoic (635 Ma) to Recent marine units. The "rate method" is based on two measurable parameters of paleomarine systems: (1) the S-isotope fractionation associated with microbial sulfate reduction (MSR), as proxied by Δ34SCAS-PY, and (2) the maximum rate of change in seawater sulfate, as proxied by &partial; δ 34SCAS/∂ t(max). The "MSR-trend method" is based on the empirical relationship of Δ34SCAS-PY to aqueous sulfate concentrations in 81 modern depositional systems. For a given paleomarine system, the rate method yields an estimate of maximum possible [SO42-]SW (although results are dependent on assumptions regarding the pyrite burial flux, FPY), and the MSR-trend method yields an estimate of mean [SO42-]SW. An analysis of seawater sulfate concentrations since 635 Ma suggests that [SO42-]SW was low during the late Neoproterozoic (<5 mM), rose sharply across the Ediacaran-Cambrian boundary (~5-10 mM), and rose again during the Permian (~10-30 mM) to levels that have varied only slightly since 250 Ma. However, Phanerozoic seawater sulfate concentrations may have been drawn down to much lower levels (~1-4 mM) during short (<~2 Myr) intervals of the Cambrian, Early Triassic, Early Jurassic, and Cretaceous as a consequence of widespread ocean anoxia, intense MSR, and pyrite burial. The procedures developed in this study offer potential for future high-resolution quantitative analyses of paleo-seawater sulfate concentrations.

The nose between ethics and aesthetics: Sushruta's legacy.

PubMed

Sorta-Bilajac, Iva; Muzur, Amir

2007-11-01

The aim of this article is to determine the origin of interest in rhinoplasty in ancient India, as well as to discuss the ethical and aesthetic implications of the nose in human history. Literature review. Articles on history of medical ethics and rhinoplastic surgery were reviewed. Sushruta is considered "the father of plastic surgery," and ancient India a cradle of rhinoplastic method called "the Indian method." Origin of interest in and need for rhinoplasty is deeply rooted in ancient Indian society due to the practice of nose mutilations as a form of public punishment for immoral conduct. The nose, once symbol of morality expressed through physical integrity, today becomes an important factor of human beauty. Rhinoplastic surgery is, both then and now, deeply pervaded with both ethics and aesthetics.

The Oldest Case of Decapitation in the New World (Lapa do Santo, East-Central Brazil)

PubMed Central

Strauss, André; Oliveira, Rodrigo Elias; Bernardo, Danilo V.; Salazar-García, Domingo C.; Talamo, Sahra; Jaouen, Klervia; Hubbe, Mark; Black, Sue; Wilkinson, Caroline; Richards, Michael Phillip; Araujo, Astolfo G. M.; Kipnis, Renato; Neves, Walter Alves

2015-01-01

We present here evidence for an early Holocene case of decapitation in the New World (Burial 26), found in the rock shelter of Lapa do Santo in 2007. Lapa do Santo is an archaeological site located in the Lagoa Santa karst in east-central Brazil with evidence of human occupation dating as far back as 11.7–12.7 cal kyBP (95.4% interval). An ultra-filtered AMS age determination on a fragment of the sphenoid provided an age range of 9.1–9.4 cal kyBP (95.4% interval) for Burial 26. The interment was composed of an articulated cranium, mandible and first six cervical vertebrae. Cut marks with a v-shaped profile were observed in the mandible and sixth cervical vertebra. The right hand was amputated and laid over the left side of the face with distal phalanges pointing to the chin and the left hand was amputated and laid over the right side of the face with distal phalanges pointing to the forehead. Strontium analysis comparing Burial 26’s isotopic signature to other specimens from Lapa do Santo suggests this was a local member of the group. Therefore, we suggest a ritualized decapitation instead of trophy-taking, testifying for the sophistication of mortuary rituals among hunter-gatherers in the Americas during the early Archaic period. In the apparent absence of wealth goods or elaborated architecture, Lapa do Santo’s inhabitants seemed to use the human body to express their cosmological principles regarding death. PMID:26397983

Postmortem microbial communities in burial soil layers of skeletonized humans.

PubMed

Thomas, Torri B; Finley, Sheree J; Wilkinson, Jeremy E; Wescott, Daniel J; Gorski, Azriel; Javan, Gulnaz T

2017-07-01

Microorganisms are major ecological participants in the successional decomposition of vertebrates. The relative abundance, or the scarcity, of certain microbial taxa in gravesoil has the potential to determine the ecological status of skeletons. However, there are substantial knowledge gaps that warrant consideration in the context of the surrounding terrestrial ecosystem. In the current study, we hypothesized that i.) soil microbial diversity is disparate in the latter stage of decomposition (skeletonization) compared to the earlier stages (fresh, bloat, active and advanced decay), and ii.) the three layers of gravesoil (top, middle, and bottom) encompass similar microbial taxa and are analogous with control soil. To test these hypotheses, microbial communities in layers of burial soil of skeletonized bodies (treated) and from control soil, obtained from burial plots with no bodies (untreated), were compared using sequencing data of the 16S rRNA gene. The results demonstrated that Acidobacteria was confirmed as the most abundant microbial genus in all treated and untreated soil layers. Furthermore, Proteobacteria demonstrated a relatively low abundance in skeletonized gravesoil which is dissimilar from previous findings that assessed soil from earlier stages of human decomposition. Also, these results determined that soil microbial signatures were analogous in all three soil layers under the effects of similar abiotic and biotic factors, and they were similar to the communities in untreated soil. Therefore, the current study produced empirical data that give conclusive evidence of soil microbial successional changes, particularly for Proteobacteria, for potential use in forensic microbiology research. Copyright © 2017 Elsevier Ltd and Faculty of Forensic and Legal Medicine. All rights reserved.

Relatively well preserved DNA is present in the crystal aggregates of fossil bones

PubMed Central

Salamon, Michal; Tuross, Noreen; Arensburg, Baruch; Weiner, Steve

2005-01-01

DNA from fossil human bones could provide invaluable information about population migrations, genetic relations between different groups and the spread of diseases. The use of ancient DNA from bones to study the genetics of past populations is, however, very often compromised by the altered and degraded state of preservation of the extracted material. The universally observed postmortem degradation, together with the real possibility of contamination with modern human DNA, makes the acquisition of reliable data, from humans in particular, very difficult. We demonstrate that relatively well preserved DNA is occluded within clusters of intergrown bone crystals that are resistant to disaggregation by the strong oxidant NaOCl. We obtained reproducible authentic sequences from both modern and ancient animal bones, including humans, from DNA extracts of crystal aggregates. The treatment with NaOCl also minimizes the possibility of modern DNA contamination. We thus demonstrate the presence of a privileged niche within fossil bone, which contains DNA in a better state of preservation than the DNA present in the total bone. This counterintuitive approach to extracting relatively well preserved DNA from bones significantly improves the chances of obtaining authentic ancient DNA sequences, especially from human bones. PMID:16162675

Apotropaic Practices and the Undead: A Biogeochemical Assessment of Deviant Burials in Post-Medieval Poland

PubMed Central

Gregoricka, Lesley A.; Betsinger, Tracy K.; Scott, Amy B.; Polcyn, Marek

2014-01-01

Apotropaic observances-traditional practices intended to prevent evil-were not uncommon in post-medieval Poland, and included specific treatment of the dead for those considered at risk for becoming vampires. Excavations at the Drawsko 1 cemetery (17th–18th c. AD) have revealed multiple examples (n = 6) of such deviant burials amidst hundreds of normative interments. While historic records describe the many potential reasons why some were more susceptible to vampirism than others, no study has attempted to discern differences in social identity between individuals within standard and deviant burials using biogeochemical analyses of human skeletal remains. The hypothesis that the individuals selected for apotropaic burial rites were non-local immigrants whose geographic origins differed from the local community was tested using radiogenic strontium isotope ratios from archaeological dental enamel. 87Sr/86Sr ratios ( = 0.7112±0.0006, 1σ) from the permanent molars of 60 individuals reflect a predominantly local population, with all individuals interred as potential vampires exhibiting local strontium isotope ratios. These data indicate that those targeted for apotropaic practices were not migrants to the region, but instead, represented local individuals whose social identity or manner of death marked them with suspicion in some other way. Cholera epidemics that swept across much of Eastern Europe during the 17th century may provide one alternate explanation as to the reason behind these apotropaic mortuary customs, as the first person to die from an infectious disease outbreak was presumed more likely to return from the dead as a vampire. PMID:25427197

Apotropaic practices and the undead: a biogeochemical assessment of deviant burials in post-medieval poland.

PubMed

Gregoricka, Lesley A; Betsinger, Tracy K; Scott, Amy B; Polcyn, Marek

2014-01-01

Apotropaic observances-traditional practices intended to prevent evil-were not uncommon in post-medieval Poland, and included specific treatment of the dead for those considered at risk for becoming vampires. Excavations at the Drawsko 1 cemetery (17th-18th c. AD) have revealed multiple examples (n = 6) of such deviant burials amidst hundreds of normative interments. While historic records describe the many potential reasons why some were more susceptible to vampirism than others, no study has attempted to discern differences in social identity between individuals within standard and deviant burials using biogeochemical analyses of human skeletal remains. The hypothesis that the individuals selected for apotropaic burial rites were non-local immigrants whose geographic origins differed from the local community was tested using radiogenic strontium isotope ratios from archaeological dental enamel. 87Sr/86Sr ratios ( = 0.7112±0.0006, 1σ) from the permanent molars of 60 individuals reflect a predominantly local population, with all individuals interred as potential vampires exhibiting local strontium isotope ratios. These data indicate that those targeted for apotropaic practices were not migrants to the region, but instead, represented local individuals whose social identity or manner of death marked them with suspicion in some other way. Cholera epidemics that swept across much of Eastern Europe during the 17th century may provide one alternate explanation as to the reason behind these apotropaic mortuary customs, as the first person to die from an infectious disease outbreak was presumed more likely to return from the dead as a vampire.

Dating of Pliocene Colorado River sediments: implications for cosmogenic burial dating and the evolution of the lower Colorado River

USGS Publications Warehouse

Matmon, Ari; Stock, Greg M.; Granger, Darryl E.; Howard, Keith A.

2011-01-01

We applied cosmogenic 26Al/10Be burial dating to sedimentary deposits of the ancestral Colorado River. We compared cosmogenic burial ages of sediments to the age of an independently well-dated overlying basalt flow at one site, and also applied cosmogenic burial dating to sediments with less precise independent age constraints. All dated gravels yielded old ages that suggest several episodes of sediment burial over the past ∼5.3 m.y. Comparison of burial ages to the overlying 4.4 Ma basalt yielded good agreement and suggests that under the most favorable conditions, cosmogenic burial dating can extend back 4–5 m.y. In contrast, results from other sites with more broadly independent age constraints highlight the complexities inherent in burial dating; these complexities arise from unknown and complicated burial histories, insufficient shielding, postburial production of cosmogenic isotopes by muons, and unknown initial 26Al/10Be ratios. Nevertheless, and in spite of the large range of burial ages and large uncertainties, we identify samples that provide reasonable burial age constraints on the depositional history of sediment along the lower ancestral Colorado River. These samples suggest possible sediment deposition and burial at ca. 5.3, 4.7, and 3.6 Ma. Our calculated basinwide erosion rate for sediment transported by the modern Colorado River (∼187 mm k.y.−1) is higher than the modern erosion rates inferred from the historic sediment load (80–100 mm k.y.−1). In contrast, basinwide paleo-erosion rates calculated from Pliocene sediments are all under 40 mm k.y.−1 The comparatively lower denudation rates calculated for the Pliocene sediment samples are surprising given that the sampled time intervals include significant Pliocene aggradation and may include much incision of the Grand Canyon and its tributaries. This conflict may arise from extensive storage of sediment along the route of the Colorado River, slower paleobedrock erosion, or the inclusion of sediments that were derived preferentially from higher elevations in the watershed.

Dating of Pliocene Colorado River sediments: Implications for cosmogenic burial dating and the evolution of the lower Colorado River

USGS Publications Warehouse

Howard, Keith A.; Matmon, Ari; Stock, Greg M.; Granger, Darryl E.

2017-01-01

We applied cosmogenic 26Al/10Be burial dating to sedimentary deposits of the ancestral Colorado River. We compared cosmogenic burial ages of sediments to the age of an independently well-dated overlying basalt flow at one site, and also applied cosmogenic burial dating to sediments with less precise independent age constraints. All dated gravels yielded old ages that suggest several episodes of sediment burial over the past ∼5.3 m.y. Comparison of burial ages to the overlying 4.4 Ma basalt yielded good agreement and suggests that under the most favorable conditions, cosmogenic burial dating can extend back 4–5 m.y. In contrast, results from other sites with more broadly independent age constraints highlight the complexities inherent in burial dating; these complexities arise from unknown and complicated burial histories, insufficient shielding, postburial production of cosmogenic isotopes by muons, and unknown initial 26Al/10Be ratios. Nevertheless, and in spite of the large range of burial ages and large uncertainties, we identify samples that provide reasonable burial age constraints on the depositional history of sediment along the lower ancestral Colorado River. These samples suggest possible sediment deposition and burial at ca. 5.3, 4.7, and 3.6 Ma.Our calculated basinwide erosion rate for sediment transported by the modern Colorado River (∼187 mm k.y.−1) is higher than the modern erosion rates inferred from the historic sediment load (80–100 mm k.y.−1). In contrast, basinwide paleo-erosion rates calculated from Pliocene sediments are all under 40 mm k.y.−1 The comparatively lower denudation rates calculated for the Pliocene sediment samples are surprising given that the sampled time intervals include significant Pliocene aggradation and may include much incision of the Grand Canyon and its tributaries. This conflict may arise from extensive storage of sediment along the route of the Colorado River, slower paleobedrock erosion, or the inclusion of sediments that were derived preferentially from higher elevations in the watershed.

Burial history of Upper Cretaceous and Tertiary rocks interpreted from vitrinite reflectance, northern Green River basin, Wyoming

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dickinson, W.W.; Law, B.E.

1985-05-01

The burial history of Upper Cretaceous and Tertiary rocks in the northern Green River basin is difficult to reconstruct for three reasons: (1) most of these rocks do not crop out, (2) there are few stratigraphic markers in the subsurface, and (3) regional uplift beginning during the Pliocene caused erosion that removed most upper Tertiary rocks. To understand better the burial and thermal history of the basin, published vitrinite reflectance (R/sub o/) data from three wells were compared to TTI (time-temperature index) maturation units calculated from Lopatin reconstructions. For each well, burial reconstructions were made as follows. Maximum depth ofmore » burial was first estimated by stratigraphic and structural evidence and by extrapolation to a paleosurface intercept of R/sub o/ = 0.2%. This burial was completed by early Oligocene (35 Ma), after which there was no net deposition. The present geothermal gradient in each well as used because there is no geologic evidence for elevated paleotemperature gradients. Using these reconstructions, calculated TTI units agreed with measured R/sub o/ values when minor adjustments were made to the estimated burial depths. Reconstructed maximum burials were deeper than present by 2500-3000 ft (762-914 m) in the Pacific Creek area, by 4000-4500 ft (1219-1372 m) in the Pinedale area, and by 0-1000 ft (0-305 m) in the Merna area. However, at Pinedale geologic evidence can only account for about 3000 ft (914 m) of additional burial. This discrepancy is explained by isoreflectance lines, which parallel the Pinedale anticline and indicate that approximately 2000 ft (610 m) of structural relief occurred after maximum burial. In other parts of the basin, isoreflectance lines also reveal significant structural deformation after maximum burial during early Oligocene to early Pliocene time.« less

[Effects of sand burial on fluxes of greenhouse gases from the soil covered by biocrust in an arid desert region.

PubMed

Teng, Jia Ling; Jia, Rong Liang; Hu, Yi Gang; Xu, Bing Xin; Chen, Meng Chen; Zhao, Yun

2016-03-01

Based on the measurements of the fluxes of CO 2 , CH 4 and N 2 O from the soil covered by two types of biocrusts dominated separately by moss and algae-lichen, followed by 0 (control), 1 (shallow) and 10 (deep) mm depths of sand burial treatments, we studied the effects of sand burial on greenhouse gases fluxes and their relationships with soil temperature and moisture at Shapotou, southeastern edge of the Tengger Desert. The results showed that sand burial had significantly positive effects on CO 2 emission fluxes and CH 4 uptake fluxes of the soil covered by the two types of biocrusts, but imposed differential effects on N 2 O fluxes depending on the type of biocrust and the depth of burial. Deep burial (10 mm) dramatically increased the N 2 O uptake fluxes of the soil co-vered by the two types of biocrusts, while shallow burial (1 mm) decreased the N 2 O uptake flux of the soil co-vered by moss crust only and had no significant effects on N 2 O uptake flux of the soil covered by algae-lichen crust. In addition, CO 2 fluxes of the two biocrusts were closely related to the soil temperature and soil moisture, thereby increasing with the raised soil surface temperature and soil moisture caused by sand burial. However, the relationships of burial-induced changes of soil temperature and moisture with the changes in the other two greenhouse gases fluxes were not evident, indicating that the variations of soil temperature and moisture caused by sand burial were not the key factors affecting the fluxes of CH 4 and N 2 O of the soil covered by the two types of biocrusts.

Munitions and Explosives of Concern Survey Methodology and In-field Testing for Wind Energy Areas on the Atlantic Outer Continental Shelf

NASA Astrophysics Data System (ADS)

DuVal, C.; Carton, G.; Trembanis, A. C.; Edwards, M.; Miller, J. K.

2017-12-01

Munitions and explosives of concern (MEC) are present in U.S. waters as a result of past and ongoing live-fire testing and training, combat operations, and sea disposal. To identify MEC that may pose a risk to human safety during development of offshore wind facilities on the Atlantic Outer Continental Shelf (OCS), the Bureau of Ocean Energy Management (BOEM) is preparing to develop guidance on risk analysis and selection processes for methods and technologies to identify MEC in Wind Energy Areas (WEA). This study developed a process for selecting appropriate technologies and methodologies for MEC detection using a synthesis of historical research, physical site characterization, remote sensing technology review, and in-field trials. Personnel were tasked with seeding a portion of the Delaware WEA with munitions surrogates, while a second group of researchers not privy to the surrogate locations tested and optimized the selected methodology to find and identify the placed targets. This in-field trial, conducted in July 2016, emphasized the use of multiple sensors for MEC detection, and led to further guidance for future MEC detection efforts on the Atlantic OCS. An April 2017 follow on study determined the fate of the munitions surrogates after the Atlantic storm season had passed. Using regional hydrodynamic models and incorporating the recommendations from the 2016 field trial, the follow on study examined the fate of the MEC and compared the findings to existing research on munitions mobility, as well as models developed as part of the Office of Naval Research Mine-Burial Program. Focus was given to characterizing the influence of sediment type on surrogate munitions behavior and the influence of mophodynamics and object burial on MEC detection. Supporting Mine-Burial models, ripple bedforms were observed to impede surrogate scour and burial in coarse sediments, while surrogate burial was both predicted and observed in finer sediments. Further, incorporation of recommendations from the previous trial in the 2017 study led to fourfold improvement of MEC detection rates over the 2016 approach. The use of modeling to characterize local morphodynamics, MEC burial or mobility, and the impact of seasonal or episodic storm events are discussed in light of technology selection and timing for future MEC detection surveys.

[Are there imported components for channels and collaterals?].

PubMed

Zhu, Bing

2005-10-01

The medical papyri in ancient Egypt written before 1500 B. C, recorded the metu system which could not be explained by modern anatomic location and was difficultly expounded by biological functions. Most of diseases were treated by dredging the metu, regulating the metu, balancing the metu, removing noxious substances from the metu, restoring the normal functions of the metu. The ancient Egyptian held that the metu forms mutual connecting channel network to carry out flowing of energy and information, with the functions of linking up external and internal organs, which is similar to linking functions of meridians-zang- and fu- organs. In the works of Hippocrates, the father of ancient Greece medicine, 2nd century B. C, also described the linking channels "phleps" on human surface. And in other country with an ancient civilization, India, had a similar channel system. About 15th century B. C, Charaka Samitha of ancient India described human "nadis" channel system. The system carried "rasas" (life liquid) connected with the whole body from the navel. Therefore, it can be held that at the embryonic stage of medicine development, the linking tube similar to channel or vessel was described, but it is interested that met and Chinese "mai" (vessel) have similar pronunciation. And mai in China was created after met.

Ancient Egyptian mummy genomes suggest an increase of Sub-Saharan African ancestry in post-Roman periods.

PubMed

Schuenemann, Verena J; Peltzer, Alexander; Welte, Beatrix; van Pelt, W Paul; Molak, Martyna; Wang, Chuan-Chao; Furtwängler, Anja; Urban, Christian; Reiter, Ella; Nieselt, Kay; Teßmann, Barbara; Francken, Michael; Harvati, Katerina; Haak, Wolfgang; Schiffels, Stephan; Krause, Johannes

2017-05-30

Egypt, located on the isthmus of Africa, is an ideal region to study historical population dynamics due to its geographic location and documented interactions with ancient civilizations in Africa, Asia and Europe. Particularly, in the first millennium BCE Egypt endured foreign domination leading to growing numbers of foreigners living within its borders possibly contributing genetically to the local population. Here we present 90 mitochondrial genomes as well as genome-wide data sets from three individuals obtained from Egyptian mummies. The samples recovered from Middle Egypt span around 1,300 years of ancient Egyptian history from the New Kingdom to the Roman Period. Our analyses reveal that ancient Egyptians shared more ancestry with Near Easterners than present-day Egyptians, who received additional sub-Saharan admixture in more recent times. This analysis establishes ancient Egyptian mummies as a genetic source to study ancient human history and offers the perspective of deciphering Egypt's past at a genome-wide level.

Ancient Egyptian mummy genomes suggest an increase of Sub-Saharan African ancestry in post-Roman periods

PubMed Central

Schuenemann, Verena J.; Peltzer, Alexander; Welte, Beatrix; van Pelt, W. Paul; Molak, Martyna; Wang, Chuan-Chao; Furtwängler, Anja; Urban, Christian; Reiter, Ella; Nieselt, Kay; Teßmann, Barbara; Francken, Michael; Harvati, Katerina; Haak, Wolfgang; Schiffels, Stephan; Krause, Johannes

2017-01-01

Egypt, located on the isthmus of Africa, is an ideal region to study historical population dynamics due to its geographic location and documented interactions with ancient civilizations in Africa, Asia and Europe. Particularly, in the first millennium BCE Egypt endured foreign domination leading to growing numbers of foreigners living within its borders possibly contributing genetically to the local population. Here we present 90 mitochondrial genomes as well as genome-wide data sets from three individuals obtained from Egyptian mummies. The samples recovered from Middle Egypt span around 1,300 years of ancient Egyptian history from the New Kingdom to the Roman Period. Our analyses reveal that ancient Egyptians shared more ancestry with Near Easterners than present-day Egyptians, who received additional sub-Saharan admixture in more recent times. This analysis establishes ancient Egyptian mummies as a genetic source to study ancient human history and offers the perspective of deciphering Egypt's past at a genome-wide level. PMID:28556824

Insights from paleomicrobiology into the indigenous peoples of pre-colonial America - a review.

PubMed

Darling, Millie I; Donoghue, Helen D

2014-04-01

This review investigates ancient infectious diseases in the Americas dated to the pre-colonial period and considers what these findings can tell us about the history of the indigenous peoples of the Americas. It gives an overview, but focuses on four microbial pathogens from this period: Helicobacter pylori, Mycobacterium tuberculosis, Trypanosoma cruzi and Coccidioides immitis, which cause stomach ulceration and gastric cancer, tuberculosis, Chagas disease and valley fever, respectively. These pathogens were selected as H. pylori can give insight into ancient human migrations into the Americas, M. tuberculosis is associated with population density and urban development, T. cruzi can elucidate human living conditions and C. immitis can indicate agricultural development. A range of methods are used to diagnose infectious disease in ancient human remains, with DNA analysis by polymerase chain reaction one of the most reliable, provided strict precautions are taken against cross contamination. The review concludes with a brief summary of the changes that took place after European exploration and colonisation.

Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal

PubMed Central

Skoglund, Pontus; Northoff, Bernd H.; Shunkov, Michael V.; Derevianko, Anatoli P.; Pääbo, Svante; Krause, Johannes; Jakobsson, Mattias

2014-01-01

One of the main impediments for obtaining DNA sequences from ancient human skeletons is the presence of contaminating modern human DNA molecules in many fossil samples and laboratory reagents. However, DNA fragments isolated from ancient specimens show a characteristic DNA damage pattern caused by miscoding lesions that differs from present day DNA sequences. Here, we develop a framework for evaluating the likelihood of a sequence originating from a model with postmortem degradation—summarized in a postmortem degradation score—which allows the identification of DNA fragments that are unlikely to originate from present day sources. We apply this approach to a contaminated Neandertal specimen from Okladnikov Cave in Siberia to isolate its endogenous DNA from modern human contaminants and show that the reconstructed mitochondrial genome sequence is more closely related to the variation of Western Neandertals than what was discernible from previous analyses. Our method opens up the potential for genomic analysis of contaminated fossil material. PMID:24469802

Insights from paleomicrobiology into the indigenous peoples of pre-colonial America - A Review

PubMed Central

Darling, Millie I; Donoghue, Helen D

2014-01-01

This review investigates ancient infectious diseases in the Americas dated to the pre-colonial period and considers what these findings can tell us about the history of the indigenous peoples of the Americas. It gives an overview, but focuses on four microbial pathogens from this period: Helicobacter pylori, Mycobacterium tuberculosis, Trypanosoma cruzi and Coccidioides immitis, which cause stomach ulceration and gastric cancer, tuberculosis, Chagas disease and valley fever, respectively. These pathogens were selected as H. pylori can give insight into ancient human migrations into the Americas, M. tuberculosis is associated with population density and urban development, T. cruzi can elucidate human living conditions and C. immitis can indicate agricultural development. A range of methods are used to diagnose infectious disease in ancient human remains, with DNA analysis by polymerase chain reaction one of the most reliable, provided strict precautions are taken against cross contamination. The review concludes with a brief summary of the changes that took place after European exploration and colonisation. PMID:24714964

[When history meets molecular medicine: molecular history of human tuberculosis].

PubMed

Ottini, Laura; Falchetti, Mario

2010-01-01

Tuberculosis represents one of the humankind's most socially devastating diseases. Despite a long history of medical research and the development of effective therapies, this disease remains a global health danger even in the 21st century. Tuberculosis may cause death but infected people with effective immunity may remain healthy for years, suggesting long-term host-pathogen co-existence. Because of its antiquity, a supposed association with human settlements and the tendency to leave typical lesions on skeletal and mummified remains, tuberculosis has been the object of intensive multidisciplinary studies, including paleo-pathological research. During the past 10 years molecular paleo-pathology developed as a new scientific discipline allowing the study of ancient pathogens by direct detection of their DNA. In this work, we reviewed evidences for tuberculosis in ancient human remains, current methods for identifying ancient mycobacterial DNA and explored current theories of Mycobacterium tuberculosis evolution and their implications in the global development of tuberculosis looking into the past and present at the same time.

Genomic insights into the origin and diversification of late maritime hunter-gatherers from the Chilean Patagonia.

PubMed

de la Fuente, Constanza; Ávila-Arcos, María C; Galimany, Jacqueline; Carpenter, Meredith L; Homburger, Julian R; Blanco, Alejandro; Contreras, Paloma; Cruz Dávalos, Diana; Reyes, Omar; San Roman, Manuel; Moreno-Estrada, Andrés; Campos, Paula F; Eng, Celeste; Huntsman, Scott; Burchard, Esteban G; Malaspinas, Anna-Sapfo; Bustamante, Carlos D; Willerslev, Eske; Llop, Elena; Verdugo, Ricardo A; Moraga, Mauricio

2018-04-24

Patagonia was the last region of the Americas reached by humans who entered the continent from Siberia ∼15,000-20,000 y ago. Despite recent genomic approaches to reconstruct the continental evolutionary history, regional characterization of ancient and modern genomes remains understudied. Exploring the genomic diversity within Patagonia is not just a valuable strategy to gain a better understanding of the history and diversification of human populations in the southernmost tip of the Americas, but it would also improve the representation of Native American diversity in global databases of human variation. Here, we present genome data from four modern populations from Central Southern Chile and Patagonia ( n = 61) and four ancient maritime individuals from Patagonia (∼1,000 y old). Both the modern and ancient individuals studied in this work have a greater genetic affinity with other modern Native Americans than to any non-American population, showing within South America a clear structure between major geographical regions. Native Patagonian Kawéskar and Yámana showed the highest genetic affinity with the ancient individuals, indicating genetic continuity in the region during the past 1,000 y before present, together with an important agreement between the ethnic affiliation and historical distribution of both groups. Lastly, the ancient maritime individuals were genetically equidistant to a ∼200-y-old terrestrial hunter-gatherer from Tierra del Fuego, which supports a model with an initial separation of a common ancestral group to both maritime populations from a terrestrial population, with a later diversification of the maritime groups.

Geology and hydrology of radioactive solid-waste burial grounds at the Hanford Reservation, Washington

USGS Publications Warehouse

LaSala, Albert Mario; Doty, Gene C.

1976-01-01

The geology and hydrology of radioactive solid waste burial grounds at the Hanford Reservation were investigated, using existing data, by the U.S. Geological Survey as part of the waste management plan of the Richland Operations Office of the Energy Research and Development Administration. The purpose of the investigation was to assist the operations office in characterizing the burial sites as to present environmental safety and as to their suitability for long-term storage (several thousand to tens of thousands of years) of radioactive sol id wastes. The burial ground sites fall into two classifications: (1) those on the low stream terraces adjacent to the Columbia River, mainly in the 100 Areas and 300 Area, and (2) those lying on the high terraces south of Gable Mountain in the 200 Areas. Evaluation of the suitability of the burial grounds for long-term storage was made almost entirely on hydrologic, geologic, and topographic criteria. Of greatest concern was the possibility that radionuclides might be leached from the buried wastes by infiltrating water and carried downward to the water table. The climate is semi-arid and the average annual precipitation is 6.4 inches at the Hanford Meteorological Station. However, the precipitation is seasonally distributed with about 50 percent occurring during the months of November, December, January, and February when evapotranspiration is negligible and conditions for infiltration are most favorable. None of the burial grounds are instrumented with monitoring devices that could be used to determine if radionuclides derived from them are reaching the water table. Burial grounds on the low stream terraces are mainly underlain by permeable materials and the water table lies at relatively shallow depths. Radionuclides conceivably could be leached from these burial grounds by percolating soil water, and radionuclides might reach the Columbia River in a relatively short time. These sites could also be inundated by erosion during a catastrophic flood. For these reasons, they are judged to be unsuited for long-term storage. Local conditions at several of these burial grounds are particularly unfavorable from the standpoint of safety. Depressions and swales at some burial grounds, such as numbers 4 and 5 in the 300 Area in which runoff can collect, enhance the possibility of water infiltrating through the buried wastes and transporting radionuclides to the water table. Also, during a high stage of the Columbia River, the water table conceivably could rise into burial grounds l and 2 of the 100 F Area. Most of the burial grounds on the low terraces contain either (1) reactor components and related equipment bearing activation products, principally cobalt-60, or (2) less hazardous radioactive materials such as uranium. The inventory of activation products in these burial grounds will decay to a safe level in a relatively short period of time (about 100 years), according to estimates made by C. D. Corbit, Douglas United Nuclear, Inc., 1969. The inventory of radionuclides is not considered by the ERDA staff to be complete, however. At these burial grounds containing activation products or less hazardous materials, investigations should be made of the radioactivity in soil and ground water beneath selected representative sites to verify that radionuclides are not migrating from the burial grounds. If migration is detected, field investigations should be made to determine the source or sources of the radionuclides and the desirability of removing the source wastes. Other burial grounds on the low terraces contain plutonium and fission products, which require long-term storage. Both the 300 WYE and the 300 North burial grounds are reported to contain plutonium in large quantities. Burial ground no. l in the 300 Area reportedly also contains plutonium. The inventory records of any other burial grounds on the low terraces suspected of containing plutonium should be reviewed to determine if pl

Cleanup Verification Package for the 618-8 Burial Ground

DOE Office of Scientific and Technical Information (OSTI.GOV)

M. J. Appel

2006-08-10

This cleanup verification package documents completion of remedial action for the 618-8 Burial Ground, also referred to as the Solid Waste Burial Ground No. 8, 318-8, and the Early Solid Waste Burial Ground. During its period of operation, the 618-8 site is speculated to have been used to bury uranium-contaminated waste derived from fuel manufacturing, and construction debris from the remodeling of the 313 Building.

78 FR 45956 - Notice of Inventory Completion: Hamilton County Department of Parks and Recreation, Hamilton...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-30

... area. In some instances, bone samples were removed from the burials to undergo further archaeological investigation. The bone samples that were recovered are included in the human remains intended for repatriation... funerary objects are 4 lots of animal bone (burned and unburned); 1 animal incisor tool; 1 antler...

76 FR 36153 - Notice of Inventory Completion: U.S. Department of the Interior, Bureau of Reclamation, Pacific...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-21

.... Between 1950 and 1957, Roger Heglar, a University of Washington graduate student, analyzed the burials... Washington University, Ellensburg, WA. The human remains and associated funerary objects were removed from... objects. The National Park Service is not responsible for the determinations in this notice. Consultation...

Collective secondary cremation in a pit grave: a unique funerary context in Portuguese Chalcolithic burial practices.

PubMed

Silva, A M; Leandro, I; Pereira, D; Costa, C; Valera, A C

2015-02-01

Perdigões is a large site with a set of ditched enclosures located at Reguengos de Monsaraz, Alentejo, South Portugal. Recently at the central area of this site burnt human remains were found in a pit (#16). This structure had inside human remains, animal bones (namely pig, sheep or goat, cattle, dog, deer and rabbit), shards, ivory idols and arrowheads. All have been subjected to fire and later deposited in that pit, resulting in a secondary disposal of human bones. The recovered fragmented human bones (4845.18 g) correspond to a minimal number of 9 individuals: 6 adults and 3 sub-adults. The aim of this work is to document and interpret this funerary context based on the study of the recovered human remains. For that purpose, observations of all alterations due to fire, such as colour change and type of bone distortion, as well as anthropological data were collected. The data obtained suggest that these human remains were probably intentionally cremated, carefully collected and finally deposited in this pit. The cremation was conducted on probably complete corpses, some of them still fairly fresh and fleshed, as some bones presented thumbnail fractures. The collective cremation of the pit 16 represents an unprecedented funerary context for Portuguese, and Iberian Peninsula, Chalcolithic burial practices. Moreover, it is an example of the increasing diversity of mortuary practices of Chalcolithic human populations described in present Portuguese territory, as well as, in the Iberian Peninsula. Copyright © 2014 Elsevier GmbH. All rights reserved.

Resources for Popular Culture in Ancient, Medieval and Renaissance Humanities.

ERIC Educational Resources Information Center

Schroeder, Fred E. H.

1996-01-01

Notes that there are few readily accessible resources for teachers who wish to include popular culture in their ancient, medieval, or renaissance history lessons. Goes on to partially remedy this situation by providing a review of print sources of information on popular culture. Also mentions useful films and artifacts. (DSK)

Yersinia pestis Orientalis in Remains of Ancient Plague Patients

PubMed Central

Drancourt, Michel; Signoli, Michel; Dang, La Vu; Bizot, Bruno; Roux, Véronique; Tzortzis, Stéfan

2007-01-01

Yersinia pestis DNA was recently detected in human remains from 2 ancient plague pandemics in France and Germany. We have now sequenced Y. pestis glpD gene in such remains, showing a 93-bp deletion specific for biotype Orientalis. These data show that only Orientalis type caused the 3 plague pandemics. PMID:17479906

World History and Geography: Ancient Civilizations. Course Models for the History-Social Science Framework: Grade 6.

ERIC Educational Resources Information Center

Hanson, Ralph, Ed.; Brooks, Diane

This document outlines ancient civilization teaching models for California sixth graders. It is another response to teachers' requests for practical assistance in implementing the "History-Social Science Framework." Units include: (1) Early Humankind and the Development of Human Societies; (2) The Beginnings of Civilization in the Near…

Ancient mitochondrial lineages support the prehistoric maternal root of Basques in Northern Iberian Peninsula.

PubMed

Palencia-Madrid, Leire; Cardoso, Sergio; Keyser, Christine; López-Quintana, Juan Carlos; Guenaga-Lizasu, Amagoia; de Pancorbo, Marian M

2017-05-01

The Basque population inhabits the Franco-Cantabrian region in southwest Europe where Palaeolithic human groups took refuge during the Last Glacial Maximum. Basques have been an isolated population, largely considered as one of the most ancient European populations and it is possible that they maintained some pre-Neolithic genetic characteristics. This work shows the results of mitochondrial DNA analysis of seven ancient human remains from the Cave of Santimamiñe in the Basque Country dated from Mesolithic to the Late Roman period. In addition, we compared these data with those obtained from a modern sample of Basque population, 158 individuals that nowadays inhabits next to the cave. The results support the hypothesis that Iberians might have been less affected by the Neolithic mitochondrial lineages carried from the Near East than populations of Central Europe and revealed the unexpected presence of prehistoric maternal lineages such as U5a2a and U3a in the Basque region. Comparison between ancient and current population samples upholds the hypothesis of continuity of the maternal lineages in the area of the Franco-Cantabrian region.

Fourier transform Raman spectroscopy and archaeology: a preliminary study of human teeth

NASA Astrophysics Data System (ADS)

Edwards, Howell G.; Farwell, Dennis W.; Roberts, Charlotte A.; Williams, Adrian C.

1994-01-01

The FT-Raman spectra of human bones and teeth in archaeological specimens dating to the 4th and 10th centuries AD from Romano-British and Anglo-Saxon burial sites in the U.K. have been recorded successfully using microscopic and remote sensing techniques. The samples exhibit fluorescence ascribed to mineral absorption from the grave soils but, nevertheless, good quality spectra are obtained. The versatility of the technique for non destructive sampling is demonstrated.

Possible ancestral structure in human populations.

PubMed

Plagnol, Vincent; Wall, Jeffrey D

2006-07-01

Determining the evolutionary relationships between fossil hominid groups such as Neanderthals and modern humans has been a question of enduring interest in human evolutionary genetics. Here we present a new method for addressing whether archaic human groups contributed to the modern gene pool (called ancient admixture), using the patterns of variation in contemporary human populations. Our method improves on previous work by explicitly accounting for recent population history before performing the analyses. Using sequence data from the Environmental Genome Project, we find strong evidence for ancient admixture in both a European and a West African population (p approximately 10(-7)), with contributions to the modern gene pool of at least 5%. While Neanderthals form an obvious archaic source population candidate in Europe, there is not yet a clear source population candidate in West Africa.

Mine Burial Assessment State-of the Art in Prediction and Modeling Workshop and Initiation of Technical Program

DTIC Science & Technology

2000-09-30

Burial Assessment State-of-the Art Science , Technology, and Modeling. A Review of Coastal Research, Modeling, and Naval Operational Needs in Shallow Water...the ONR Mine Burial Prediction Program are summarized below. 1) Completed comprehensive technical reports: a. Mine Burial Assessment, State-of-the Art ... Science , Technology, and Modeling. A review of Coastal Research, Modeling, and Naval Operational Needs in Shallow Water Environments with

Molecular history of plague.

PubMed

Drancourt, M; Raoult, D

2016-11-01

Plague, a deadly zoonose caused by the bacterium Yersinia pestis, has been firmly documented in 39 historical burial sites in Eurasia that date from the Bronze Age to two historical pandemics spanning the 6th to 18th centuries. Palaeomicrobiologic data, including gene and spacer sequences, whole genome sequences and protein data, confirmed that two historical pandemics swept over Europe from probable Asian sources and possible two-way-ticket journeys back from Europe to Asia. These investigations made it possible to address questions regarding the potential sources and routes of transmission by completing the standard rodent and rodent-flea transmission scheme. This suggested that plague was transmissible by human ectoparasites such as lice, and that Y. pestis was able to persist for months in the soil, which is a source of reinfection for burrowing mammals. The analyses of seven complete genome sequences from the Bronze Age indicated that Y. pestis was probably not an ectoparasite-borne pathogen in these populations. Further analyses of 14 genomes indicated that the Justinian pandemic strains may have formed a clade distinct from the one responsible for the second pandemic, spanning in Y. pestis branch 1, which also comprises the third pandemic strains. Further palaeomicrobiologic studies must tightly connect with historical and anthropologic studies to resolve questions regarding the actual sources of plague in ancient populations, alternative routes of transmission and resistance traits. Answering these questions will broaden our understanding of plague epidemiology so we may better face the actuality of this deadly infection in countries where it remains epidemic. Copyright © 2016. Published by Elsevier Ltd.

Hyperostosis frontalis interna - a marker of social status? Evidence from the Bronze-Age "high society" of Qatna, Syria.

PubMed

Flohr, S; Witzel, C

2011-02-01

In 1719 Morgagni described a condition, today known as hyperostosis frontalis interna (HFI), as one sign within a triad consisting of HFI, virilism, and obesity. Today, HFI is predominantly found in older women. Although the etiology of HFI has not yet been determined precisely, the condition has been linked to metabolic disorders. HFI is reported to be rare in the archaeological record and the frequency of the condition is thought to have increased during the 19th and 20th centuries. We present preliminary results on the occurrence of HFI in the commingled human bone assemblage from "tomb VII" discovered underneath the Bronze Age royal palace of the ancient city of Qatna, Syria. A preliminary minimal number of individuals of 70 has been estimated for the as yet not fully analyzed skeletal remains. Skull fragments of nine individuals exhibit endocranial bone formations consistent with HFI. Rarity of stress indicators in the skeletons, the rich grave goods, and the burial place within the area of the Royal palace are suggestive of a high social status and an economically favorable situation of the buried individuals. Assuming that their life style included a high calorie diet in combination with little physical activity, acquired metabolic disorders may have been present in many individuals. The comparatively high number of individuals presenting HFI in the studied sample might therefore be viewed as being related to their high social status. Multiple occurrences of HFI in archaeological skeletal assemblages might serve as a proxy for social status. Copyright © 2010 Elsevier GmbH. All rights reserved.

Ancient human genomes suggest three ancestral populations for present-day Europeans

PubMed Central

Lazaridis, Iosif; Patterson, Nick; Mittnik, Alissa; Renaud, Gabriel; Mallick, Swapan; Kirsanow, Karola; Sudmant, Peter H.; Schraiber, Joshua G.; Castellano, Sergi; Lipson, Mark; Berger, Bonnie; Economou, Christos; Bollongino, Ruth; Fu, Qiaomei; Bos, Kirsten I.; Nordenfelt, Susanne; Li, Heng; de Filippo, Cesare; Prüfer, Kay; Sawyer, Susanna; Posth, Cosimo; Haak, Wolfgang; Hallgren, Fredrik; Fornander, Elin; Rohland, Nadin; Delsate, Dominique; Francken, Michael; Guinet, Jean-Michel; Wahl, Joachim; Ayodo, George; Babiker, Hamza A.; Bailliet, Graciela; Balanovska, Elena; Balanovsky, Oleg; Barrantes, Ramiro; Bedoya, Gabriel; Ben-Ami, Haim; Bene, Judit; Berrada, Fouad; Bravi, Claudio M.; Brisighelli, Francesca; Busby, George B. J.; Cali, Francesco; Churnosov, Mikhail; Cole, David E. C.; Corach, Daniel; Damba, Larissa; van Driem, George; Dryomov, Stanislav; Dugoujon, Jean-Michel; Fedorova, Sardana A.; Romero, Irene Gallego; Gubina, Marina; Hammer, Michael; Henn, Brenna M.; Hervig, Tor; Hodoglugil, Ugur; Jha, Aashish R.; Karachanak-Yankova, Sena; Khusainova, Rita; Khusnutdinova, Elza; Kittles, Rick; Kivisild, Toomas; Klitz, William; Kučinskas, Vaidutis; Kushniarevich, Alena; Laredj, Leila; Litvinov, Sergey; Loukidis, Theologos; Mahley, Robert W.; Melegh, Béla; Metspalu, Ene; Molina, Julio; Mountain, Joanna; Näkkäläjärvi, Klemetti; Nesheva, Desislava; Nyambo, Thomas; Osipova, Ludmila; Parik, Jüri; Platonov, Fedor; Posukh, Olga; Romano, Valentino; Rothhammer, Francisco; Rudan, Igor; Ruizbakiev, Ruslan; Sahakyan, Hovhannes; Sajantila, Antti; Salas, Antonio; Starikovskaya, Elena B.; Tarekegn, Ayele; Toncheva, Draga; Turdikulova, Shahlo; Uktveryte, Ingrida; Utevska, Olga; Vasquez, René; Villena, Mercedes; Voevoda, Mikhail; Winkler, Cheryl; Yepiskoposyan, Levon; Zalloua, Pierre; Zemunik, Tatijana; Cooper, Alan; Capelli, Cristian; Thomas, Mark G.; Ruiz-Linares, Andres; Tishkoff, Sarah A.; Singh, Lalji; Thangaraj, Kumarasamy; Villems, Richard; Comas, David; Sukernik, Rem; Metspalu, Mait; Meyer, Matthias; Eichler, Evan E.; Burger, Joachim; Slatkin, Montgomery; Pääbo, Svante; Kelso, Janet; Reich, David; Krause, Johannes

2014-01-01

We sequenced the genomes of a ~7,000 year old farmer from Germany and eight ~8,000 year old hunter-gatherers from Luxembourg and Sweden. We analyzed these and other ancient genomes1–4 with 2,345 contemporary humans to show that most present Europeans derive from at least three highly differentiated populations: West European Hunter-Gatherers (WHG), who contributed ancestry to all Europeans but not to Near Easterners; Ancient North Eurasians (ANE) related to Upper Paleolithic Siberians3, who contributed to both Europeans and Near Easterners; and Early European Farmers (EEF), who were mainly of Near Eastern origin but also harbored WHG-related ancestry. We model these populations’ deep relationships and show that EEF had ~44% ancestry from a “Basal Eurasian” population that split prior to the diversification of other non-African lineages. PMID:25230663

Archaeogenetics in evolutionary medicine.

PubMed

Bouwman, Abigail; Rühli, Frank

2016-09-01

Archaeogenetics is the study of exploration of ancient DNA (aDNA) of more than 70 years old. It is an important part of the wider studies of many different areas of our past, including animal, plant and pathogen evolution and domestication events. Hereby, we address specifically the impact of research in archaeogenetics in the broader field of evolutionary medicine. Studies on ancient hominid genomes help to understand even modern health patterns. Human genetic microevolution, e.g. related to abilities of post-weaning milk consumption, and specifically genetic adaptation in disease susceptibility, e.g. towards malaria and other infectious diseases, are of the upmost importance in contributions of archeogenetics on the evolutionary understanding of human health and disease. With the increase in both the understanding of modern medical genetics and the ability to deep sequence ancient genetic information, the field of archaeogenetic evolutionary medicine is blossoming.

Ancient human genomes suggest three ancestral populations for present-day Europeans.

PubMed

Lazaridis, Iosif; Patterson, Nick; Mittnik, Alissa; Renaud, Gabriel; Mallick, Swapan; Kirsanow, Karola; Sudmant, Peter H; Schraiber, Joshua G; Castellano, Sergi; Lipson, Mark; Berger, Bonnie; Economou, Christos; Bollongino, Ruth; Fu, Qiaomei; Bos, Kirsten I; Nordenfelt, Susanne; Li, Heng; de Filippo, Cesare; Prüfer, Kay; Sawyer, Susanna; Posth, Cosimo; Haak, Wolfgang; Hallgren, Fredrik; Fornander, Elin; Rohland, Nadin; Delsate, Dominique; Francken, Michael; Guinet, Jean-Michel; Wahl, Joachim; Ayodo, George; Babiker, Hamza A; Bailliet, Graciela; Balanovska, Elena; Balanovsky, Oleg; Barrantes, Ramiro; Bedoya, Gabriel; Ben-Ami, Haim; Bene, Judit; Berrada, Fouad; Bravi, Claudio M; Brisighelli, Francesca; Busby, George B J; Cali, Francesco; Churnosov, Mikhail; Cole, David E C; Corach, Daniel; Damba, Larissa; van Driem, George; Dryomov, Stanislav; Dugoujon, Jean-Michel; Fedorova, Sardana A; Gallego Romero, Irene; Gubina, Marina; Hammer, Michael; Henn, Brenna M; Hervig, Tor; Hodoglugil, Ugur; Jha, Aashish R; Karachanak-Yankova, Sena; Khusainova, Rita; Khusnutdinova, Elza; Kittles, Rick; Kivisild, Toomas; Klitz, William; Kučinskas, Vaidutis; Kushniarevich, Alena; Laredj, Leila; Litvinov, Sergey; Loukidis, Theologos; Mahley, Robert W; Melegh, Béla; Metspalu, Ene; Molina, Julio; Mountain, Joanna; Näkkäläjärvi, Klemetti; Nesheva, Desislava; Nyambo, Thomas; Osipova, Ludmila; Parik, Jüri; Platonov, Fedor; Posukh, Olga; Romano, Valentino; Rothhammer, Francisco; Rudan, Igor; Ruizbakiev, Ruslan; Sahakyan, Hovhannes; Sajantila, Antti; Salas, Antonio; Starikovskaya, Elena B; Tarekegn, Ayele; Toncheva, Draga; Turdikulova, Shahlo; Uktveryte, Ingrida; Utevska, Olga; Vasquez, René; Villena, Mercedes; Voevoda, Mikhail; Winkler, Cheryl A; Yepiskoposyan, Levon; Zalloua, Pierre; Zemunik, Tatijana; Cooper, Alan; Capelli, Cristian; Thomas, Mark G; Ruiz-Linares, Andres; Tishkoff, Sarah A; Singh, Lalji; Thangaraj, Kumarasamy; Villems, Richard; Comas, David; Sukernik, Rem; Metspalu, Mait; Meyer, Matthias; Eichler, Evan E; Burger, Joachim; Slatkin, Montgomery; Pääbo, Svante; Kelso, Janet; Reich, David; Krause, Johannes

2014-09-18

We sequenced the genomes of a ∼7,000-year-old farmer from Germany and eight ∼8,000-year-old hunter-gatherers from Luxembourg and Sweden. We analysed these and other ancient genomes with 2,345 contemporary humans to show that most present-day Europeans derive from at least three highly differentiated populations: west European hunter-gatherers, who contributed ancestry to all Europeans but not to Near Easterners; ancient north Eurasians related to Upper Palaeolithic Siberians, who contributed to both Europeans and Near Easterners; and early European farmers, who were mainly of Near Eastern origin but also harboured west European hunter-gatherer related ancestry. We model these populations' deep relationships and show that early European farmers had ∼44% ancestry from a 'basal Eurasian' population that split before the diversification of other non-African lineages.

Anticancer activity of botanical compounds in ancient fermented beverages (review).

PubMed

McGovern, P E; Christofidou-Solomidou, M; Wang, W; Dukes, F; Davidson, T; El-Deiry, W S

2010-07-01

Humans around the globe probably discovered natural remedies against disease and cancer by trial and error over the millennia. Biomolecular archaeological analyses of ancient organics, especially plants dissolved or decocted as fermented beverages, have begun to reveal the preliterate histories of traditional pharmacopeias, which often date back thousands of years earlier than ancient textual, ethnohistorical, and ethnological evidence. In this new approach to drug discovery, two case studies from ancient Egypt and China illustrate how ancient medicines can be reconstructed from chemical and archaeological data and their active compounds delimited for testing their anticancer and other medicinal effects. Specifically, isoscopoletin from Artemisia argyi, artemisinin from Artemisia annua, and the latter's more easily assimilated semi-synthetic derivative, artesunate, showed the greatest activity in vitro against lung and colon cancers. In vivo tests of these compounds previously unscreened against lung and pancreatic cancers are planned for the future.

snpAD: An ancient DNA genotype caller.

PubMed

Prüfer, Kay

2018-06-21

The study of ancient genomes can elucidate the evolutionary past. However, analyses are complicated by base-modifications in ancient DNA molecules that result in errors in DNA sequences. These errors are particularly common near the ends of sequences and pose a challenge for genotype calling. I describe an iterative method that estimates genotype frequencies and errors along sequences to allow for accurate genotype calling from ancient sequences. The implementation of this method, called snpAD, performs well on high-coverage ancient data, as shown by simulations and by subsampling the data of a high-coverage Neandertal genome. Although estimates for low-coverage genomes are less accurate, I am able to derive approximate estimates of heterozygosity from several low-coverage Neandertals. These estimates show that low heterozygosity, compared to modern humans, was common among Neandertals. The C ++ code of snpAD is freely available at http://bioinf.eva.mpg.de/snpAD/. Supplementary data are available at Bioinformatics online.

Ancient DNA from nomads in 2500-year-old archeological sites of Pengyang, China.

PubMed

Zhao, Yong-Bin; Li, Hong-Jie; Cai, Da-Wei; Li, Chun-Xiang; Zhang, Quan-Chao; Zhu, Hong; Zhou, Hui

2010-04-01

Six human remains (dating approximately 2500 years ago) were excavated from Pengyang, China, an area occupied by both ancient nomadic and farming people. The funerary objects found with these remains suggested they were nomads. To further confirm their ancestry, we analyzed both the maternal lineages and paternal lineages of the ancient DNA. From the mitochondrial DNA, six haplotypes were identified as three haplogroups: C, D4 and M10. The haplotype-sharing populations and phylogenetic analyses revealed that these individuals were closely associated with the ancient Xiongnu and modern northern Asians. Single-nucleotide polymorphism analysis of Y chromosomes from four male samples that were typed as haplogroup Q indicated that these people had originated in Siberia. These results show that these ancient people from Pengyang present a close genetic affinity to nomadic people, indicating that northern nomads had reached the Central Plain area of China nearly 2500 years ago.

Setting the stage - building and working in an ancient DNA laboratory.

PubMed

Knapp, Michael; Clarke, Andrew C; Horsburgh, K Ann; Matisoo-Smith, Elizabeth A

2012-01-20

With the introduction of next generation high throughput sequencing in 2005 and the resulting revolution in genetics, ancient DNA research has rapidly developed from an interesting but marginal field within evolutionary biology into one that can contribute significantly to our understanding of evolution in general and the development of our own species in particular. While the amount of sequence data available from ancient human, other animal and plant remains has increased dramatically over the past five years, some key limitations of ancient DNA research remain. Most notably, reduction of contamination and the authentication of results are of utmost importance. A number of studies have addressed different aspects of sampling, DNA extraction and DNA manipulation in order to establish protocols that most efficiently generate reproducible and authentic results. As increasing numbers of researchers from different backgrounds become interested in using ancient DNA technology to address key questions, the need for practical guidelines on how to construct and use an ancient DNA facility arises. The aim of this article is therefore to provide practical tips for building a state-of-the-art ancient DNA facility. It is intended to help researchers new to the field of ancient DNA research generally, and those considering the application of next generation sequencing, in their planning process. Copyright © 2011 Elsevier GmbH. All rights reserved.

Development of Chemical Indicators of Groundwater Contamination Near the Carcass Burial Site

NASA Astrophysics Data System (ADS)

Kim, H.; Choi, J.; Kim, M.; Choi, J.; Lee, M.; Lee, H.; Jeon, S.; Bang, S.; Noh, H.; Yoo, J.; Park, S.; Kim, H.; Kim, D.; Lee, Y.; Han, J.

2011-12-01

A serious outbreak of foot and mouth disease (FMD) and avian influenza (AI) led to the culling of millions of livestock in South Korea from late 2010 to earlier 2011. Because of the scale of FMD and AI epidemic in Korea and rapid spread of the diseases, mass burial for the disposal of carcass was conducted to halt the outbreak. The improper construction of the burial site or inappropriate management of the carcass burial facility can cause the contamination of groundwater mainly due to the discharges of leachate through the base of disposal pit. The leachate from carcass burial contains by products of carcass decay such as amino acids, nitrate, ammonia and chloride. The presence of these chemical components in groundwater can be used as indicators demonstrating contamination of groundwater with leachate from carcass. The major concern about using these chemical indicators is that other sources including manures, fertilizers and waste waters from human or animal activities already exist in farming area. However, we lack the understanding of how groundwater contamination due to mass burial of carcass can be differentiated from the contamination due to livestock manures which shows similar chemical characteristics. The chemical compositions of the leachate from carcass burial site and the wastewater from livestock manure treatment facilities were compared. The chemical compositions considered include total organic carbon (TOC), total nitrogen (TN), nitrate, organic nitrogen (Organic nitrogen =TN-Ammonium Nitrogen- Nitrate nitrogen), ammonia, chloride, sodium, potassium and amino acids (20 analytes). The ratios of concentrations of the chemical compositions as indicators of contamination were determined to distinguish the sources of contamination in groundwater. Indicators which showed a linear relationship between two factors and revealed a distinct difference between the carcass leachate and livestock manure were chosen. In addition, the background level of the indicators in groundwater which was presumed not to be contaminated with the leachate was also considered. The indicators selected from these step were TN/nitrate nitrogen, organic nitrogen/TN, organic nitrogen/Cl and organic nitrogen/Na. In a similar manner, concentrations and peak pattern of amino acids with LC-MSMS as indicators were also selected. One more step added to identify the source of a contaminant release was the consideration of the transport of 20 amino acids in the subsurface which could significantly change the peak pattern among different amino acids. Six group of amino acid as indicators were chosen and they were Isoleucine/Valine, Leucine/Tryptophane, Valine/Tryptophane, Lysine/Leucine, Lysine/Isoleucine and Methionine/Lysine. The use of chemical indicators was attempted in this study to distinguish the sources of contamination by considering both the concentration of contaminants and the unique patterns of contamination.

Evidence for prehistoric origins of Egyptian mummification in late Neolithic burials.

PubMed

Jones, Jana; Higham, Thomas F G; Oldfield, Ron; O'Connor, Terry P; Buckley, Stephen A

2014-01-01

Traditional theories on ancient Egyptian mummification postulate that in the prehistoric period (i.e. the Neolithic and Chalcolithic periods, 5th and 4th millennia B.C.) bodies were naturally desiccated through the action of the hot, dry desert sand. Although molding of the body with resin-impregnated linen is believed to be an early Pharaonic forerunner to more complex processes, scientific evidence for the early use of resins in artificial mummification has until now been limited to isolated occurrences during the late Old Kingdom (c. 2200 B.C.), their use becoming more apparent during the Middle Kingdom (c. 2000-1600 BC). We examined linen wrappings from bodies in securely provenanced tombs (pit graves) in the earliest recorded ancient Egyptian cemeteries at Mostagedda in the Badari region (Upper Egypt). Our investigations of these prehistoric funerary wrappings using a combination of gas chromatography-mass spectrometry (GC-MS) and thermal desorption/pyrolysis (TD/Py)-GC-MS have identified a pine resin, an aromatic plant extract, a plant gum/sugar, a natural petroleum source, and a plant oil/animal fat in directly AMS-dated funerary wrappings. Predating the earliest scientific evidence by more than a millennium, these embalming agents constitute complex, processed recipes of the same natural products, in similar proportions, as those utilized at the zenith of Pharaonic mummification some 3,000 years later. The antibacterial properties of some of these ingredients and the localized soft-tissue preservation that they would have afforded lead us to conclude that these represent the very beginnings of experimentation that would evolve into the famous mummification practice of the Pharaonic period.

Evidence for Prehistoric Origins of Egyptian Mummification in Late Neolithic Burials

PubMed Central

Jones, Jana; Higham, Thomas F. G.; Oldfield, Ron; O'Connor, Terry P.; Buckley, Stephen A.

2014-01-01

Traditional theories on ancient Egyptian mummification postulate that in the prehistoric period (i.e. the Neolithic and Chalcolithic periods, 5th and 4th millennia B.C.) bodies were naturally desiccated through the action of the hot, dry desert sand. Although molding of the body with resin-impregnated linen is believed to be an early Pharaonic forerunner to more complex processes, scientific evidence for the early use of resins in artificial mummification has until now been limited to isolated occurrences during the late Old Kingdom (c. 2200 B.C.), their use becoming more apparent during the Middle Kingdom (c. 2000-1600 BC). We examined linen wrappings from bodies in securely provenanced tombs (pit graves) in the earliest recorded ancient Egyptian cemeteries at Mostagedda in the Badari region (Upper Egypt). Our investigations of these prehistoric funerary wrappings using a combination of gas chromatography-mass spectrometry (GC-MS) and thermal desorption/pyrolysis (TD/Py)-GC-MS have identified a pine resin, an aromatic plant extract, a plant gum/sugar, a natural petroleum source, and a plant oil/animal fat in directly AMS-dated funerary wrappings. Predating the earliest scientific evidence by more than a millennium, these embalming agents constitute complex, processed recipes of the same natural products, in similar proportions, as those utilized at the zenith of Pharaonic mummification some 3,000 years later. The antibacterial properties of some of these ingredients and the localized soft-tissue preservation that they would have afforded lead us to conclude that these represent the very beginnings of experimentation that would evolve into the famous mummification practice of the Pharaonic period. PMID:25118605

[Historical and biological approaches to the study of Modern Age French plague mass burials].

PubMed

Bianuccii, Raffaella; Tzortzis, Stéfan; Fornaciari, Gino; Signoli, Michel

2010-01-01

The "Black Death" and subsequent epidemics from 1346 to the early 18th century spread from the Caspian Sea all over Europe six hundred years after the outbreak of the Justinian plague (541-767 AD). Plague has been one of the most devastating infectious diseases that affected the humankind and has caused approximately 200 million human deaths historically. Here we describe the different approaches adopted in the study of several French putative plague mass burials dating to the Modern Age (16th-18th centuries). Through complementation of historical, archaeological and paleobiological data, ample knowledge of both the causes that favoured the spread of the Medieval plague in cities, towns and small villages and of the modification of the customary funerary practices in urban and rural areas due to plague are gained.

32 CFR 553.17 - Persons ineligible for burial in an Army national cemetery.

Code of Federal Regulations, 2010 CFR

2010-07-01

... burial in an Army national cemetery. (a) A father, mother, brother, sister, and in-law is not eligible... for burial in Arlington National Cemetery unless the Service-connected family member has been or will...

Evolutionary anthropology and genes: investigating the genetics of human evolution from excavated skeletal remains.

PubMed

Anastasiou, Evilena; Mitchell, Piers D

2013-10-01

The development of molecular tools for the extraction, analysis and interpretation of DNA from the remains of ancient organisms (paleogenetics) has revolutionised a range of disciplines as diverse as the fields of human evolution, bioarchaeology, epidemiology, microbiology, taxonomy and population genetics. The paper draws attention to some of the challenges associated with the extraction and interpretation of ancient DNA from archaeological material, and then reviews the influence of paleogenetics on the field of human evolution. It discusses the main contributions of molecular studies to reconstructing the evolutionary and phylogenetic relationships between extinct hominins (human ancestors) and anatomically modern humans. It also explores the evidence for evolutionary changes in the genetic structure of anatomically modern humans in recent millennia. This breadth of research has led to discoveries that would never have been possible using traditional approaches to human evolution. Copyright © 2013 Elsevier B.V. All rights reserved.

Response of SCP-2L domain of human MFE-2 to ligand removal: binding site closure and burial of peroxisomal targeting signal.

PubMed

Lensink, M F; Haapalainen, A M; Hiltunen, J K; Glumoff, T; Juffer, A H

2002-10-11

In the study of the structure and function relationship of human MFE-2, we have investigated the dynamics of human MFE-2SCP-2L (hSCP-2L) and its response to ligand removal. A comparison was made with homologous rabbit SCP-2. Breathing and a closing motion are found, identifiable with an adjustment in size and a closing off of the binding pocket. Crucial residues for structural integrity have been identified. Particularly mobile areas of the protein are loop 1 that is connecting helices A and C in space, and helix D, next to the entrance of the pocket. In hSCP-2L, the binding pocket gets occupied by Phe93, which is making a tight hydrophobic contact with Trp36. In addition, it is found that the C-terminal peroxisomal targeting signal (PTS1) that is solvent exposed in the complexed structure becomes buried when no ligand is present. Moreover, an anti-correlation exists between burial of PTS1 and the size of the binding pocket. The results are in accordance with plant nsLTPs, where a similar accommodation of binding pocket size was found after ligand binding/removal. Furthermore, the calculations support the suggestion of a ligand-assisted targeting mechanism.

40,000-Year-Old Individual from Asia Provides Insight into Early Population Structure in Eurasia.

PubMed

Yang, Melinda A; Gao, Xing; Theunert, Christoph; Tong, Haowen; Aximu-Petri, Ayinuer; Nickel, Birgit; Slatkin, Montgomery; Meyer, Matthias; Pääbo, Svante; Kelso, Janet; Fu, Qiaomei

2017-10-23

By at least 45,000 years before present, anatomically modern humans had spread across Eurasia [1-3], but it is not well known how diverse these early populations were and whether they contributed substantially to later people or represent early modern human expansions into Eurasia that left no surviving descendants today. Analyses of genome-wide data from several ancient individuals from Western Eurasia and Siberia have shown that some of these individuals have relationships to present-day Europeans [4, 5] while others did not contribute to present-day Eurasian populations [3, 6]. As contributions from Upper Paleolithic populations in Eastern Eurasia to present-day humans and their relationship to other early Eurasians is not clear, we generated genome-wide data from a 40,000-year-old individual from Tianyuan Cave, China, [1, 7] to study his relationship to ancient and present-day humans. We find that he is more related to present-day and ancient Asians than he is to Europeans, but he shares more alleles with a 35,000-year-old European individual than he shares with other ancient Europeans, indicating that the separation between early Europeans and early Asians was not a single population split. We also find that the Tianyuan individual shares more alleles with some Native American groups in South America than with Native Americans elsewhere, providing further support for population substructure in Asia [8] and suggesting that this persisted from 40,000 years ago until the colonization of the Americas. Our study of the Tianyuan individual highlights the complex migration and subdivision of early human populations in Eurasia. Copyright © 2017 Elsevier Ltd. All rights reserved.

Legacy of human-induced C erosion and burial on soil-atmosphere C exchange.

PubMed

Van Oost, Kristof; Verstraeten, Gert; Doetterl, Sebastian; Notebaert, Bastiaan; Wiaux, François; Broothaerts, Nils; Six, Johan

2012-11-20

Carbon exchange associated with accelerated erosion following land cover change is an important component of the global C cycle. In current assessments, however, this component is not accounted for. Here, we integrate the effects of accelerated C erosion across point, hillslope, and catchment scale for the 780-km(2) Dijle River catchment over the period 4000 B.C. to A.D. 2000 to demonstrate that accelerated erosion results in a net C sink. We found this long-term C sink to be equivalent to 43% of the eroded C and to have offset 39% (17-66%) of the C emissions due to anthropogenic land cover change since the advent of agriculture. Nevertheless, the erosion-induced C sink strength is limited by a significant loss of buried C in terrestrial depositional stores, which lagged the burial. The time lag between burial and subsequent loss at this study site implies that the C buried in eroded terrestrial deposits during the agricultural expansion of the last 150 y cannot be assumed to be inert to further destabilization, and indeed might become a significant C source. Our analysis exemplifies that accounting for the non-steady-state C dynamics in geomorphic active systems is pertinent to understanding both past and future anthropogenic global change.

Legacy of human-induced C erosion and burial on soil–atmosphere C exchange

PubMed Central

Van Oost, Kristof; Verstraeten, Gert; Doetterl, Sebastian; Notebaert, Bastiaan; Wiaux, François; Broothaerts, Nils; Six, Johan

2012-01-01

Carbon exchange associated with accelerated erosion following land cover change is an important component of the global C cycle. In current assessments, however, this component is not accounted for. Here, we integrate the effects of accelerated C erosion across point, hillslope, and catchment scale for the 780-km2 Dijle River catchment over the period 4000 B.C. to A.D. 2000 to demonstrate that accelerated erosion results in a net C sink. We found this long-term C sink to be equivalent to 43% of the eroded C and to have offset 39% (17–66%) of the C emissions due to anthropogenic land cover change since the advent of agriculture. Nevertheless, the erosion-induced C sink strength is limited by a significant loss of buried C in terrestrial depositional stores, which lagged the burial. The time lag between burial and subsequent loss at this study site implies that the C buried in eroded terrestrial deposits during the agricultural expansion of the last 150 y cannot be assumed to be inert to further destabilization, and indeed might become a significant C source. Our analysis exemplifies that accounting for the non–steady-state C dynamics in geomorphic active systems is pertinent to understanding both past and future anthropogenic global change. PMID:23134723

Food and social complexity at Çayönü Tepesi, southeastern Anatolia: Stable isotope evidence of differentiation in diet according to burial practice and sex in the early Neolithic

PubMed Central

Pearson, Jessica; Grove, Matt; Özbek, Metin; Hongo, Hitomi

2013-01-01

The identification of early social complexity and differentiation in early village societies has been approached in the past most notably through the evaluation of rituals and architectural layouts. Such studies could be complemented by an approach that provides data about everyday behaviours of individuals. We took 540 human and animal bone samples for stable carbon and nitrogen isotope analysis from the Neolithic site of Çayönü Tepesi in southeastern Anatolia. The inhabitants at this site chose to bury their dead in two different ways at different times during its occupation: beneath the floors of their houses, but also inside a public mortuary building known as the Skull Building. This variation provides an opportunity using isotope methods to test whether there was evidence for structuring of daily activities (diet in this case) that might serve to reinforce this change in burial practice. We show that when the inhabitants of Çayönü Tepesi changed their architecture and operated different burial practices in conjunction, this coincided with other aspects of behaviour including socially-constituted food consumption practices, which served to reinforce social identities. PMID:24976671

Paleopathological interpretations of hypermobility syndrome in the art from ancient America.

PubMed

Checa, Angel

2012-10-01

Paleopathological representations of hypermobility syndrome were assumed in pre-Columbian artifacts from different ancient civilizations from America. Anthropomorphic sculptures from several museums and galleries visited on site or thru Internet show the human figure in contorted positions. These positions are only possible within well-trained individuals or persons with hyperextensibility of the joints.

75 FR 68377 - Notice of Inventory Completion: Anthropological Studies Center, Archaeological Collections...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-05

... basalt tool, 317 non-human bone fragments, 1 abalone shell fragment, 2 ash/soil samples, 1 groundstone, 1 quartz chunk, 3 abalone pendants and 4 olivella beads. One of the burials identified was associated with... groundstones, 2 steatite beads, 1 abalone pendant, 2 clamshell disk beads, 23 olivella beads and 2 steatite...

The mongoose, the pheasant, the pox, and the retrovirus.

PubMed

Etienne, Lucie; Emerman, Michael

2013-01-01

Paleovirology is the study of ancient viruses. The existence of a paleovirus can sometimes be detected by virtue of its accidental insertion into the germline of different animal species, which allows one to date when the virus actually existed. However, the ancient and the modern often connect, as modern viruses have unexpected origins that can be traced to ancient infections. The genomes of two species of mongooses and an egg-laying mammal called an echidna show that a virus currently present in poultry, the reticuloendotheliosis virus (REV), is actually of ancient exotic mammalian origin. REV apparently spread to poultry through a circuitous route involving the isolation of malaria parasites from a pheasant from Borneo housed at the Bronx Zoo that was contaminated with REV. Repeated passage of this virus in poultry adapted the virus to its new host. At some point, the virus got inserted into another virus, called fowlpox virus, which has spread back into the wild. Although REV may still exist somewhere in a mammalian host, its modern form links an 8 million-year-old infection of the ancestor of a mongoose to a virus that now is circulating in wild birds through malaria studies in the mid-20(th) century. These lessons of ancient and modern viruses have implications for modern human pandemics from viral reservoirs and for human interventions that may come with unintended consequences.

The discovery of the body: human dissection and its cultural contexts in ancient Greece.

PubMed Central

von Staden, H.

1992-01-01

In the first half of the third century B.C, two Greeks, Herophilus of Chalcedon and his younger contemporary Erasistratus of Ceos, became the first and last ancient scientists to perform systematic dissections of human cadavers. In all probability, they also conducted vivisections of condemned criminals. Their anatomical and physiological discoveries were extraordinary. The uniqueness of these events presents an intriguing historical puzzle. Animals had been dissected by Aristotle in the preceding century (and partly dissected by other Greeks in earlier centuries), and, later, Galen (second century A.D.) and others again systematically dissected numerous animals. But no ancient scientists ever seem to have resumed systematic human dissection. This paper explores, first, the cultural factors--including traditional Greek attitudes to the corpse and to the skin, also as manifested in Greek sacred laws--that may have prevented systematic human dissection during almost all of Greek antiquity, from the Pre-Socratic philosopher-scientists of the sixth and fifth centuries B.C. to distinguished Greek physicians of the later Roman Empire. Second, the exceptional constellation of cultural, political, and social circumstances in early Alexandria that might have emboldened Herophilus to overcome the pressures of cultural traditions and to initiate systematic human dissection, is analyzed. Finally, the paper explores possible reasons for the mysteriously abrupt disappearance of systematic human dissection from Greek science after the death of Erasistratus and Herophilus. PMID:1285450

Analysis of Drosophila TRPA1 reveals an ancient origin for human chemical nociception.

PubMed

Kang, Kyeongjin; Pulver, Stefan R; Panzano, Vincent C; Chang, Elaine C; Griffith, Leslie C; Theobald, Douglas L; Garrity, Paul A

2010-03-25

Chemical nociception, the detection of tissue-damaging chemicals, is important for animal survival and causes human pain and inflammation, but its evolutionary origins are largely unknown. Reactive electrophiles are a class of noxious compounds humans find pungent and irritating, such as allyl isothiocyanate (in wasabi) and acrolein (in cigarette smoke). Diverse animals, from insects to humans, find reactive electrophiles aversive, but whether this reflects conservation of an ancient sensory modality has been unclear. Here we identify the molecular basis of reactive electrophile detection in flies. We demonstrate that Drosophila TRPA1 (Transient receptor potential A1), the Drosophila melanogaster orthologue of the human irritant sensor, acts in gustatory chemosensors to inhibit reactive electrophile ingestion. We show that fly and mosquito TRPA1 orthologues are molecular sensors of electrophiles, using a mechanism conserved with vertebrate TRPA1s. Phylogenetic analyses indicate that invertebrate and vertebrate TRPA1s share a common ancestor that possessed critical characteristics required for electrophile detection. These findings support emergence of TRPA1-based electrophile detection in a common bilaterian ancestor, with widespread conservation throughout vertebrate and invertebrate evolution. Such conservation contrasts with the evolutionary divergence of canonical olfactory and gustatory receptors and may relate to electrophile toxicity. We propose that human pain perception relies on an ancient chemical sensor conserved across approximately 500 million years of animal evolution.

Biosecurity procedures for the environmental management of carcasses burial sites in Korea.

PubMed

Kim, Geon-Ha; Pramanik, Sudipta

2016-12-01

Avian influenza and foot-and-mouth disease are two main contagious pathogenic viral disease which are responsible for the massive burials of livestock in Korea since burial is the primary measure to control these outbreaks. Biosecurity is a set of preventive measures designed to prevent the risk of spreading of these infectious diseases. The main objective of this paper is to discuss about the requirements of biosecurity and develop protocol outlines for environmental management of burial sites in Korea. Current practice prescribes to minimize the potential for on-farm pollution and the spread of the infectious diseases. Specific biosecurity procedures such as proper assessment of leachate quality, safe handling and disposal of leachate, adequate leachate pollution monitoring, necessary seasonal management of burial site, and appropriate sterilization process must be carried out to prevent the indirect transmission of pathogens from the burial sites. Policy makers should acquire robust knowledge of biosecurity for establishing more effective future legislation for carcasses disposal in Korea.

Mobile elements reveal small population size in the ancient ancestors of Homo sapiens.

PubMed

Huff, Chad D; Xing, Jinchuan; Rogers, Alan R; Witherspoon, David; Jorde, Lynn B

2010-02-02

The genealogies of different genetic loci vary in depth. The deeper the genealogy, the greater the chance that it will include a rare event, such as the insertion of a mobile element. Therefore, the genealogy of a region that contains a mobile element is on average older than that of the rest of the genome. In a simple demographic model, the expected time to most recent common ancestor (TMRCA) is doubled if a rare insertion is present. We test this expectation by examining single nucleotide polymorphisms around polymorphic Alu insertions from two completely sequenced human genomes. The estimated TMRCA for regions containing a polymorphic insertion is two times larger than the genomic average (P < <10(-30)), as predicted. Because genealogies that contain polymorphic mobile elements are old, they are shaped largely by the forces of ancient population history and are insensitive to recent demographic events, such as bottlenecks and expansions. Remarkably, the information in just two human DNA sequences provides substantial information about ancient human population size. By comparing the likelihood of various demographic models, we estimate that the effective population size of human ancestors living before 1.2 million years ago was 18,500, and we can reject all models where the ancient effective population size was larger than 26,000. This result implies an unusually small population for a species spread across the entire Old World, particularly in light of the effective population sizes of chimpanzees (21,000) and gorillas (25,000), which each inhabit only one part of a single continent.

The Diversity of REcent and Ancient huMan (DREAM): A New Microarray for Genetic Anthropology and Genealogy, Forensics, and Personalized Medicine

PubMed Central

Yusuf, Leeban; Anderson, Ainan I J; Pirooznia, Mehdi; Arnellos, Dimitrios; Vilshansky, Gregory; Ercal, Gunes; Lu, Yontao; Webster, Teresa; Baird, Michael L; Esposito, Umberto

2017-01-01

Abstract The human population displays wide variety in demographic history, ancestry, content of DNA derived from hominins or ancient populations, adaptation, traits, copy number variation, drug response, and more. These polymorphisms are of broad interest to population geneticists, forensics investigators, and medical professionals. Historically, much of that knowledge was gained from population survey projects. Although many commercial arrays exist for genome-wide single-nucleotide polymorphism genotyping, their design specifications are limited and they do not allow a full exploration of biodiversity. We thereby aimed to design the Diversity of REcent and Ancient huMan (DREAM)—an all-inclusive microarray that would allow both identification of known associations and exploration of standing questions in genetic anthropology, forensics, and personalized medicine. DREAM includes probes to interrogate ancestry informative markers obtained from over 450 human populations, over 200 ancient genomes, and 10 archaic hominins. DREAM can identify 94% and 61% of all known Y and mitochondrial haplogroups, respectively, and was vetted to avoid interrogation of clinically relevant markers. To demonstrate its capabilities, we compared its FST distributions with those of the 1000 Genomes Project and commercial arrays. Although all arrays yielded similarly shaped (inverse J) FST distributions, DREAM’s autosomal and X-chromosomal distributions had the highest mean FST, attesting to its ability to discern subpopulations. DREAM performances are further illustrated in biogeographical, identical by descent, and copy number variation analyses. In summary, with approximately 800,000 markers spanning nearly 2,000 genes, DREAM is a useful tool for genetic anthropology, forensic, and personalized medicine studies. PMID:29165562

People of the ancient rainforest: late Pleistocene foragers at the Batadomba-lena rockshelter, Sri Lanka.

PubMed

Perera, Nimal; Kourampas, Nikos; Simpson, Ian A; Deraniyagala, Siran U; Bulbeck, David; Kamminga, Johan; Perera, Jude; Fuller, Dorian Q; Szabó, Katherine; Oliveira, Nuno V

2011-09-01

Batadomba-lena, a rockshelter in the rainforest of southwestern Sri Lanka, has yielded some of the earliest evidence of Homo sapiens in South Asia. H. sapiens foragers were present at Batadomba-lena from ca. 36,000 cal BP to the terminal Pleistocene and Holocene. Human occupation was sporadic before the global Last Glacial Maximum (LGM). Batadomba-lena's Late Pleistocene inhabitants foraged for a broad spectrum of plant and mainly arboreal animal resources (monkeys, squirrels and abundant rainforest snails), derived from a landscape that retained equatorial rainforest cover through periods of pronounced regional aridity during the LGM. Juxtaposed hearths, palaeofloors with habitation debris, postholes, excavated pits, and animal and plant remains, including abundant Canarium nutshells, reflect intensive habitation of the rockshelter in times of monsoon intensification and biome reorganisation after ca. 16,000 cal BP. This period corresponds with further broadening of the economic spectrum, evidenced though increased contribution of squirrels, freshwater snails and Canarium nuts in the diet of the rockshelter occupants. Microliths are more abundant and morphologically diverse in the earliest, pre-LGM layer and decline markedly during intensified rockshelter use on the wane of the LGM. We propose that changing toolkits and subsistence base reflect changing foraging practices, from shorter-lived visits of highly mobile foraging bands in the period before the LGM, to intensified use of Batadomba-lena and intense foraging for diverse resources around the site during and, especially, following the LGM. Traces of ochre, marine shell beads and other objects from an 80 km-distant shore, and, possibly burials reflect symbolic practices from the outset of human presence at the rockshelter. Evidence for differentiated use of space (individual hearths, possible habitation structures) is present in LGM and terminal Pleistocene layers. The record of Batadomba-lena demonstrates that Late Pleistocene pathways to (aspects of) behavioural 'modernity' (composite tools, practice of symbolism and ritual, broad spectrum economy) were diverse and ecologically contingent. Copyright © 2011 Elsevier Ltd. All rights reserved.

Pigment phenotype and biogeographical ancestry from ancient skeletal remains: inferences from multiplexed autosomal SNP analysis.

PubMed

Bouakaze, Caroline; Keyser, Christine; Crubézy, Eric; Montagnon, Daniel; Ludes, Bertrand

2009-07-01

In the present study, a multiplexed genotyping assay for ten single nucleotide polymorphisms (SNPs) located within six pigmentation candidate genes was developed on modern biological samples and applied to DNA retrieved from 25 archeological human remains from southern central Siberia dating from the Bronze and Iron Ages. SNP genotyping was successful for the majority of ancient samples and revealed that most probably had typical European pigment features, i.e., blue or green eye color, light hair color and skin type, and were likely of European individual ancestry. To our knowledge, this study reports for the first time the multiplexed typing of autosomal SNPs on aged and degraded DNA. By providing valuable information on pigment traits of an individual and allowing individual biogeographical ancestry estimation, autosomal SNP typing can improve ancient DNA studies and aid human identification in some forensic casework situations when used to complement conventional molecular markers.

Landscapes, depositional environments and human occupation at Middle Paleolithic open-air sites in the southern Levant, with new insights from Nesher Ramla, Israel

NASA Astrophysics Data System (ADS)

Zaidner, Yossi; Frumkin, Amos; Friesem, David; Tsatskin, Alexander; Shahack-Gross, Ruth

2016-04-01

Middle Paleolithic human occupation in the Levant (250-50 ka ago) has been recorded in roofed (cave and rockshelter) and open-air sites. Research at these different types of sites yielded different perspectives on the Middle Paleolithic human behavior and evolution. Until recently, open-air Middle Paleolithic sites in the Levant were found in three major sedimentary environments: fluvial, lake-margin and spring. Here we describe a unique depositional environment and formation processes at the recently discovered open-air site of Nesher Ramla (Israel) and discuss their contribution to understanding site formation processes in open-air sites in the Levant. The site is 8-m-thick Middle Paleolithic sequence (OSL dated to 170-80 ka) that is located in a karst sinkhole formed by gravitational deformation and sagging into underground voids. The sedimentary sequence was shaped by gravitational collapse, cyclic colluviation of soil and gravel into the depression, waterlogging, in situ pedogenesis and human occupation. Original bedding and combustion features are well-preserved in the Lower archaeological sequence, a rare occurrence in comparison to other open-air archaeological sites. This phenomenon coincides with episodes of fast sedimentation/burial, which also allowed better preservation of microscopic remains such as ash. The Upper archaeological sequence does not exhibit bedding or preservation of ash, despite presence of heat-affected lithic artifacts, which makes it similar to other open-air sites in the Levant. We suggest that rate of burial is the major factor that caused the difference between the Upper and Lower sequences. The differences in the burial rate may be connected to environmental and vegetation changes at the end of MIS 6. We also identified an interplay between sediment in-wash and density of human activity remains, i.e. during episodes of low natural sediment input the density of artifacts is higher relative to episodes with high rate of sediment in-wash. The detailed analysis of natural and anthropogenic processes at Nesher Ramla suggests a much wider spectrum of processes than previously reported for southern Levantine Paleolithic sites. Nesher Ramla shares certain depositional and post-depositional characteristics with both cave and open-air sites and provides a better insight into processes which control both types of sites.

Documenting the diet in ancient human populations through stable isotope analysis of hair.

PubMed

Macko, S A; Engel, M H; Andrusevich, V; Lubec, G; O'Connell, T C; Hedges, R E

1999-01-29

Fundamental to the understanding of human history is the ability to make interpretations based on artefacts and other remains which are used to gather information about an ancient population. Sequestered in the organic matrices of these remains can be information, for example, concerning incidence of disease, genetic defects and diet. Stable isotopic compositions, especially those made on isolates of collagen from bones, have been used to help suggest principal dietary components. A significant problem in the use of collagen is its long-term stability, and the possibility of isotopic alteration during early diagenesis, or through contaminating condensation reactions. In this study, we suggest that a commonly overlooked material, human hair, may represent an ideal material to be used in addressing human diets of ancient civilizations. Through the analysis of the amino-acid composition of modern hair, as well as samples that were subjected to radiation (thus simulating ageing of the hair) and hair from humans that is up to 5200 years old, we have observed little in the way of chemical change. The principal amino acids observed in all of these samples are essentially identical in relative abundances and content. Dominating the compositions are serine, glutamic acid, threonine, glycine and leucine, respectively accounting for approximately 15%, 17%, 10%, 8% and 8% of the total hydrolysable amino acids. Even minor components (for example, alanine, valine, isoleucine) show similar constancy between the samples of different ages. This constancy clearly indicates minimal alteration of the amino-acid composition of the hair. Further, it would indicate that hair is well preserved and is amenable to isotopic analysis as a tool for distinguishing sources of nutrition. Based on this observation, we have isotopically characterized modern individuals for whom the diet has been documented. Both stable nitrogen and carbon isotope compositions were assessed, and together provide an indication of trophic status, and principal type (C3 or C4) of vegetation consumed. True vegans have nitrogen isotope compositions of about 7/1000 whereas humans consuming larger amounts of meat, eggs, or milk are more enriched in the heavy nitrogen isotope. We have also analysed large cross-sections of modern humans from North America and Europe to provide an indication of the variability seen in a population (the supermarket diet). There is a wide diversity in both carbon and nitrogen isotope values based at least partially on the levels of seafood, corn-fed beef and grains in the diets. Following analysis of the ancient hair, we have observed similar trends in certain ancient populations. For example, the Coptics of Egypt (1000 BP) and Chinchorro of Chile (5000-800 BP) have diets of similar diversity to those observed in the modern group but were isotopically influenced by local nutritional sources. In other ancient hair (Egyptian Late Middle Kingdom mummies, ca. 4000 BP), we have observed a much more uniform isotopic signature, indicating a more constant diet. We have also recognized a primary vegetarian component in the diet of the Neolithic Ice Man of the Oetztaler Alps (5200 BP). In certain cases, it appears that sulphur isotopes may help to further constrain dietary interpretations, owing to the good preservation and sulphur content of hair. It appears that analysis of the often-overlooked hair in archaeological sites may represent a significant new approach for understanding ancient human communities.

Documenting the diet in ancient human populations through stable isotope analysis of hair.

PubMed Central

Macko, S A; Engel, M H; Andrusevich, V; Lubec, G; O'Connell, T C; Hedges, R E

1999-01-01

Fundamental to the understanding of human history is the ability to make interpretations based on artefacts and other remains which are used to gather information about an ancient population. Sequestered in the organic matrices of these remains can be information, for example, concerning incidence of disease, genetic defects and diet. Stable isotopic compositions, especially those made on isolates of collagen from bones, have been used to help suggest principal dietary components. A significant problem in the use of collagen is its long-term stability, and the possibility of isotopic alteration during early diagenesis, or through contaminating condensation reactions. In this study, we suggest that a commonly overlooked material, human hair, may represent an ideal material to be used in addressing human diets of ancient civilizations. Through the analysis of the amino-acid composition of modern hair, as well as samples that were subjected to radiation (thus simulating ageing of the hair) and hair from humans that is up to 5200 years old, we have observed little in the way of chemical change. The principal amino acids observed in all of these samples are essentially identical in relative abundances and content. Dominating the compositions are serine, glutamic acid, threonine, glycine and leucine, respectively accounting for approximately 15%, 17%, 10%, 8% and 8% of the total hydrolysable amino acids. Even minor components (for example, alanine, valine, isoleucine) show similar constancy between the samples of different ages. This constancy clearly indicates minimal alteration of the amino-acid composition of the hair. Further, it would indicate that hair is well preserved and is amenable to isotopic analysis as a tool for distinguishing sources of nutrition. Based on this observation, we have isotopically characterized modern individuals for whom the diet has been documented. Both stable nitrogen and carbon isotope compositions were assessed, and together provide an indication of trophic status, and principal type (C3 or C4) of vegetation consumed. True vegans have nitrogen isotope compositions of about 7/1000 whereas humans consuming larger amounts of meat, eggs, or milk are more enriched in the heavy nitrogen isotope. We have also analysed large cross-sections of modern humans from North America and Europe to provide an indication of the variability seen in a population (the supermarket diet). There is a wide diversity in both carbon and nitrogen isotope values based at least partially on the levels of seafood, corn-fed beef and grains in the diets. Following analysis of the ancient hair, we have observed similar trends in certain ancient populations. For example, the Coptics of Egypt (1000 BP) and Chinchorro of Chile (5000-800 BP) have diets of similar diversity to those observed in the modern group but were isotopically influenced by local nutritional sources. In other ancient hair (Egyptian Late Middle Kingdom mummies, ca. 4000 BP), we have observed a much more uniform isotopic signature, indicating a more constant diet. We have also recognized a primary vegetarian component in the diet of the Neolithic Ice Man of the Oetztaler Alps (5200 BP). In certain cases, it appears that sulphur isotopes may help to further constrain dietary interpretations, owing to the good preservation and sulphur content of hair. It appears that analysis of the often-overlooked hair in archaeological sites may represent a significant new approach for understanding ancient human communities. PMID:10091248

[Gout and its manifestations, description and treatment in ancient times].

PubMed

Alušík, Tomáš; Alušík, Štefan

2015-01-01

Gout is a very old disease, which exists for thousands of years. The first descriptions interpreted as the symptoms of gout can be found already in the Egyptian medical papyri dating to the 3rd mill. BC. In the Ancient world, many physicians dealt with the causes, diagnostics and the treatments of gout, such as Hippocrates of Cos, Diocles of Carystus or Claudios Galenos. A personified gout (as the goddess Podagra) is also to be found in the Ancient mythology and culture. Several human remnants of the people suffering from gout are preserved from the Antiquity as well.

URBAN STREAM BURIAL INCREASES WATERSHED-SCALE NITRATE EXPORT

EPA Science Inventory

Nitrogen (N) uptake in streams is an important ecosystem service that may be affected by the widespread burial of streams in stormwater pipes in urban watersheds. We predicted that stream burial reduces the capacity of streams to remove nitrate (NO3-) from the water column by in...

Combining cosmogenic radionuclides and amino acid racemization to date late Pliocene glacial deposits exposed on Baffin Island, Nunavut, Canada

NASA Astrophysics Data System (ADS)

Refsnider, K. A.; Miller, G. H.

2009-12-01

Sequences of glacial deposits spanning the Quaternary are valuable archives recording the effects of glaciation on landscapes through time, but determining the age of such deposits has long challenged geologists. The recent advances in cosmogenic radionuclide (CRN) measurement has made it possible to date some of these deposits, but dating buried glacial sediments in most settings remains problematic. Here we explore a new approach to date the oldest glacial deposits in the Plio-Pleistocene Clyde Foreland Formation of Baffin Island. This formation, approximately 40 m thick, includes interlayered shell-bearing marine, glaciomarine, and glacial sediments deposited along the northern margin of the Laurentide Ice Sheet and earlier continental ice sheets. Previous work on foraminifera assemblages suggests that the deposits span the last ≥2 Ma. By combining CRN measurements (10Be and 26Al) from the glacial units and measurements of the D-alloisoleucine:L-isoleucine ratios (A/I) in valves of the mollusk Hiatella arctica in the marine units overlying a particular glacial deposit, we can calculate the age of the glacial deposit. Because the post-burial temperature history for the mollusks preserved in the Clyde Foreland Formation is poorly constrained, A/I ratios alone cannot be used to determine absolute ages. Instead, we use A/I ratios to identify sediment packages of discrete ages and define a step-wise burial history function for glacial units. A/I ratios of all packages (<0.3 for the total hydrolysate fraction) fall within the A/I interval characterized by linear racemization kinetics, so the age of each package in the burial history function can simply be defined as a fractional age with respect to the total burial age for the glacial deposit of interest. The long duration of burial (26Al/10Be as low as 1.6±0.6 at 2σ) and low initial CRN inventories require that post-burial muogenic production is accounted for using the burial history function. We apply a numerical model to calculate the duration of burial from the measured CRN concentrations for a given inherited CRN inventory. But because this initial inventory is unknown, a single CRN sample/burial history combination will not provide a unique age solution. Instead, measurements from multiple localities where a particular glacial deposit has differing burial histories (i.e., the thickness of overlying units or ages of overlying units differ) are required to statistically determine the total burial age that most closely matches the observed CRN inventories and burial histories.

Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome.

PubMed

Pedersen, Jakob Skou; Valen, Eivind; Velazquez, Amhed M Vargas; Parker, Brian J; Rasmussen, Morten; Lindgreen, Stinus; Lilje, Berit; Tobin, Desmond J; Kelly, Theresa K; Vang, Søren; Andersson, Robin; Jones, Peter A; Hoover, Cindi A; Tikhonov, Alexei; Prokhortchouk, Egor; Rubin, Edward M; Sandelin, Albin; Gilbert, M Thomas P; Krogh, Anders; Willerslev, Eske; Orlando, Ludovic

2014-03-01

Epigenetic information is available from contemporary organisms, but is difficult to track back in evolutionary time. Here, we show that genome-wide epigenetic information can be gathered directly from next-generation sequence reads of DNA isolated from ancient remains. Using the genome sequence data generated from hair shafts of a 4000-yr-old Paleo-Eskimo belonging to the Saqqaq culture, we generate the first ancient nucleosome map coupled with a genome-wide survey of cytosine methylation levels. The validity of both nucleosome map and methylation levels were confirmed by the recovery of the expected signals at promoter regions, exon/intron boundaries, and CTCF sites. The top-scoring nucleosome calls revealed distinct DNA positioning biases, attesting to nucleotide-level accuracy. The ancient methylation levels exhibited high conservation over time, clustering closely with modern hair tissues. Using ancient methylation information, we estimated the age at death of the Saqqaq individual and illustrate how epigenetic information can be used to infer ancient gene expression. Similar epigenetic signatures were found in other fossil material, such as 110,000- to 130,000-yr-old bones, supporting the contention that ancient epigenomic information can be reconstructed from a deep past. Our findings lay the foundation for extracting epigenomic information from ancient samples, allowing shifts in epialleles to be tracked through evolutionary time, as well as providing an original window into modern epigenomics.

Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome

PubMed Central

Pedersen, Jakob Skou; Valen, Eivind; Velazquez, Amhed M. Vargas; Parker, Brian J.; Rasmussen, Morten; Lindgreen, Stinus; Lilje, Berit; Tobin, Desmond J.; Kelly, Theresa K.; Vang, Søren; Andersson, Robin; Jones, Peter A.; Hoover, Cindi A.; Tikhonov, Alexei; Prokhortchouk, Egor; Rubin, Edward M.; Sandelin, Albin; Gilbert, M. Thomas P.; Krogh, Anders; Willerslev, Eske; Orlando, Ludovic

2014-01-01

Epigenetic information is available from contemporary organisms, but is difficult to track back in evolutionary time. Here, we show that genome-wide epigenetic information can be gathered directly from next-generation sequence reads of DNA isolated from ancient remains. Using the genome sequence data generated from hair shafts of a 4000-yr-old Paleo-Eskimo belonging to the Saqqaq culture, we generate the first ancient nucleosome map coupled with a genome-wide survey of cytosine methylation levels. The validity of both nucleosome map and methylation levels were confirmed by the recovery of the expected signals at promoter regions, exon/intron boundaries, and CTCF sites. The top-scoring nucleosome calls revealed distinct DNA positioning biases, attesting to nucleotide-level accuracy. The ancient methylation levels exhibited high conservation over time, clustering closely with modern hair tissues. Using ancient methylation information, we estimated the age at death of the Saqqaq individual and illustrate how epigenetic information can be used to infer ancient gene expression. Similar epigenetic signatures were found in other fossil material, such as 110,000- to 130,000-yr-old bones, supporting the contention that ancient epigenomic information can be reconstructed from a deep past. Our findings lay the foundation for extracting epigenomic information from ancient samples, allowing shifts in epialleles to be tracked through evolutionary time, as well as providing an original window into modern epigenomics. PMID:24299735

Ancient Uses of Meteoritic Metals as Precedent for Modern In-Situ Asteroid Mining

NASA Astrophysics Data System (ADS)

Mardon, Austin A.; Fawcett, Brett; Krispin, Daniel

2016-05-01

Given the strain on earth's supply of metal and the meteoritic content of meteorites, a prudent course would be to pursue in-situ asteroid mining of meteors for metal. There is a precedent for this going back to ancient Egypt; humans have always used the meteoritic content of meteorites to fashion everything from weapons to cosmetics.

Burial affects the biogeochemistry of headwater streams in a midwestern US metropolitan area

EPA Science Inventory

Nitrogen (N) retention in stream networks is an important ecosystem service that may be affected by the widespread burial of headwater streams in urban basins. Urban stream burial has only recently been recognized by ecologists and little research has addressed the extent to whi...

Burial affects the biogeochemistry of headwater streams in a midwestern US metropolitan area - slides

EPA Science Inventory

Nitrogen (N) retention in stream networks is an important ecosystem service that may be affected by the widespread burial of headwater streams in urban basins. Urban stream burial has only recently been recognized by ecologists as a regional environmental impact and little resea...

Effects of urban stream burial on nitrogen uptake and ecosystem metabolism: implications for watershed nitrogen and carbon fluxes

EPA Science Inventory

Urbanization has resulted in extensive burial and channelization of headwater streams, yet little is known about impacts on stream ecosystem functions critical for reducing downstream nitrogen pollution. To characterize the biogeochemical impact of stream burial, we measured NO3...

38 CFR 3.1602 - Special conditions governing payments.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., funeral, plot, interment and transportation expenses, the burial and plot or interment allowance will be... transportation services or furnished the burial plot will have priority over claims of persons whose personal... burial allowance or plot or interment allowance will be made where it would escheat. [26 FR 1621, Feb. 24...

20 CFR 416.1231 - Burial spaces and certain funds set aside for burial expenses.

Code of Federal Regulations, 2010 CFR

2010-04-01

... children and step-children; an individual's brothers, sisters, parents, adoptive parents, and the spouses... are set aside for the burial arrangements of the eligible child's ineligible parent or parent's spouse... separation; i.e., a circumstance beyond an individual's control which makes conversion/separation impossible...

Effects of Urban Stream Burial on Organic Matter Dynamics and Reach Scale Nitrate Retention

EPA Science Inventory

Nitrogen (N) retention in streams is an important ecosystem service that may be affected by the widespread burial of streams in stormwater pipes in urban watersheds. We predicted that stream burial suppresses the capacity of streams to retain nitrate (NO3-) by eliminating primar...

Constraining Quaternary ice covers and erosion rates using cosmogenic 26Al/10Be nuclide concentrations

NASA Astrophysics Data System (ADS)

Knudsen, Mads Faurschou; Egholm, David Lundbek

2018-02-01

Paired cosmogenic nuclides are often used to constrain the exposure/burial history of landforms repeatedly covered by ice during the Quaternary, including tors, high-elevation surfaces, and steep alpine summits in the circum-Arctic regions. The approach generally exploits the different production rates and half-lives of 10Be and 26Al to infer past exposure/burial histories. However, the two-stage minimum-limiting exposure and burial model regularly used to interpret the nuclides ignores the effect of variable erosion rates, which potentially may bias the interpretation. In this study, we use a Monte Carlo model approach to investigate systematically how the exposure/burial and erosion history, including variable erosion and the timing of erosion events, influence concentrations of 10Be and 26Al. The results show that low 26Al/10Be ratios are not uniquely associated with prolonged burial under ice, but may as well reflect ice covers that were limited to the coldest part of the late Pleistocene combined with recent exhumation of the sample, e.g. due to glacial plucking during the last glacial period. As an example, we simulate published 26Al/10Be data from Svalbard and show that it is possible that the steep alpine summits experienced ice-free conditions during large parts of the late Pleistocene and varying amounts of glacial erosion. This scenario, which contrasts with the original interpretation of more-or-less continuous burial under non-erosive ice over the last ∼1 Myr, thus challenge the conventional interpretation of such data. On the other hand, high 26Al/10Be ratios do not necessarily reflect limited burial under ice, which is the common interpretation of high ratios. In fact, high 26Al/10Be ratios may also reflect extensive burial under ice, combined with a change from burial under erosive ice, which brought the sample close to the surface, to burial under non-erosive ice at some point during the mid-Pleistocene. Importantly, by allowing for variable erosion rates, the model results may reconcile spatially varying 26Al/10Be data from bedrock surfaces preserved over multiple glacial cycles, suggesting that samples from the same high-elevation surface or neighbouring alpine summits may have experienced similar long-term burial under ice, but varying amounts of glacial erosion.

Evidence of authentic DNA from Danish Viking Age skeletons untouched by humans for 1,000 years.

PubMed

Melchior, Linea; Kivisild, Toomas; Lynnerup, Niels; Dissing, Jørgen

2008-05-28

Given the relative abundance of modern human DNA and the inherent impossibility for incontestable proof of authenticity, results obtained on ancient human DNA have often been questioned. The widely accepted rules regarding ancient DNA work mainly affect laboratory procedures, however, pre-laboratory contamination occurring during excavation and archaeological-/anthropological handling of human remains as well as rapid degradation of authentic DNA after excavation are major obstacles. We avoided some of these obstacles by analyzing DNA from ten Viking Age subjects that at the time of sampling were untouched by humans for 1,000 years. We removed teeth from the subjects prior to handling by archaeologists and anthropologists using protective equipment. An additional tooth was removed after standard archaeological and anthropological handling. All pre-PCR work was carried out in a "clean- laboratory" dedicated solely to ancient DNA work. Mitochondrial DNA was extracted and overlapping fragments spanning the HVR-1 region as well as diagnostic sites in the coding region were PCR amplified, cloned and sequenced. Consistent results were obtained with the "unhandled" teeth and there was no indication of contamination, while the latter was the case with half of the "handled" teeth. The results allowed the unequivocal assignment of a specific haplotype to each of the subjects, all haplotypes being compatible in their character states with a phylogenetic tree drawn from present day European populations. Several of the haplotypes are either infrequent or have not been observed in modern Scandinavians. The observation of haplogroup I in the present study (<2% in modern Scandinavians) supports our previous findings of a pronounced frequency of this haplogroup in Viking and Iron Age Danes. The present work provides further evidence that retrieval of ancient human DNA is a possible task provided adequate precautions are taken and well-considered sampling is applied.

Evidence of Authentic DNA from Danish Viking Age Skeletons Untouched by Humans for 1,000 Years

PubMed Central

Melchior, Linea; Kivisild, Toomas; Lynnerup, Niels; Dissing, Jørgen

2008-01-01

Background Given the relative abundance of modern human DNA and the inherent impossibility for incontestable proof of authenticity, results obtained on ancient human DNA have often been questioned. The widely accepted rules regarding ancient DNA work mainly affect laboratory procedures, however, pre-laboratory contamination occurring during excavation and archaeological-/anthropological handling of human remains as well as rapid degradation of authentic DNA after excavation are major obstacles. Methodology/Principal Findings We avoided some of these obstacles by analyzing DNA from ten Viking Age subjects that at the time of sampling were untouched by humans for 1,000 years. We removed teeth from the subjects prior to handling by archaeologists and anthropologists using protective equipment. An additional tooth was removed after standard archaeological and anthropological handling. All pre-PCR work was carried out in a “clean- laboratory” dedicated solely to ancient DNA work. Mitochondrial DNA was extracted and overlapping fragments spanning the HVR-1 region as well as diagnostic sites in the coding region were PCR amplified, cloned and sequenced. Consistent results were obtained with the “unhandled” teeth and there was no indication of contamination, while the latter was the case with half of the “handled” teeth. The results allowed the unequivocal assignment of a specific haplotype to each of the subjects, all haplotypes being compatible in their character states with a phylogenetic tree drawn from present day European populations. Several of the haplotypes are either infrequent or have not been observed in modern Scandinavians. The observation of haplogroup I in the present study (<2% in modern Scandinavians) supports our previous findings of a pronounced frequency of this haplogroup in Viking and Iron Age Danes. Conclusion The present work provides further evidence that retrieval of ancient human DNA is a possible task provided adequate precautions are taken and well-considered sampling is applied. PMID:18509537

Astronomy of Nabta Playa

NASA Astrophysics Data System (ADS)

McK Mahille, J.; Schild, R.; Wendorf, F.; Brenmer, R.

2007-07-01

The repetitive orientation of megaliths, human burials, and cattle burials toward the northern regions of the sky reveals a very early symbolic connection to the heavens at Nabta Playa, Egypt. The groups of shaped stones facing north may have represented spirits of individuals who died on the trail or locally. A second piece of evidence for astronomy at Nabta Playa is the stone circle with its two sightlines toward the north and toward the rising sun at the June solstice. Finally, the five alignments of megaliths, which were oriented to bright stars in the fifth millennium, suggest an even more careful attention to the heavens. The "empty tombs" and deeply buried table rocks of the Complex Structures provide some of the greatest enigmas of Nabta Playa. The recurrent symbolism of the ceremonial centre involves issues that would have been of both practical and symbolic importance to the nomads: death, water, cattle, sun, and stars.

The influence of preburial insect access on the decomposition rate.

PubMed

Bachmann, Jutta; Simmons, Tal

2010-07-01

This study compared total body score (TBS) in buried remains (35 cm depth) with and without insect access prior to burial. Sixty rabbit carcasses were exhumed at 50 accumulated degree day (ADD) intervals. Weight loss, TBS, intra-abdominal decomposition, carcass/soil interface temperature, and below-carcass soil pH were recorded and analyzed. Results showed significant differences (p < 0.001) in decomposition rates between carcasses with and without insect access prior to burial. An approximately 30% enhanced decomposition rate with insects was observed. TBS was the most valid tool in postmortem interval (PMI) estimation. All other variables showed only weak relationships to decomposition stages, adding little value to PMI estimation. Although progress in estimating the PMI for surface remains has been made, no previous studies have accomplished this for buried remains. This study builds a framework to which further comparable studies can contribute, to produce predictive models for PMI estimation in buried human remains.

Nipah Virus Infection Outbreak with Nosocomial and Corpse-to-Human Transmission, Bangladesh

PubMed Central

Hossain, M. Jahangir; Gurley, Emily S.; Ameen, Kazi M.H.; Parveen, Shahana; Islam, M. Saiful; Faruque, Labib I.; Podder, Goutam; Banu, Sultana S.; Lo, Michael K.; Rollin, Pierre E.; Rota, Paul A.; Daszak, Peter; Rahman, Mahmudur; Luby, Stephen P.

2013-01-01

Active Nipah virus encephalitis surveillance identified an encephalitis cluster and sporadic cases in Faridpur, Bangladesh, in January 2010. We identified 16 case-patients; 14 of these patients died. For 1 case-patient, the only known exposure was hugging a deceased patient with a probable case, while another case-patient’s exposure involved preparing the same corpse for burial by removing oral secretions and anogenital excreta with a cloth and bare hands. Among 7 persons with confirmed sporadic cases, 6 died, including a physician who had physically examined encephalitis patients without gloves or a mask. Nipah virus–infected patients were more likely than community-based controls to report drinking raw date palm sap and to have had physical contact with an encephalitis patient (29% vs. 4%, matched odds ratio undefined). Efforts to prevent transmission should focus on reducing caregivers’ exposure to infected patients’ bodily secretions during care and traditional burial practices. PMID:23347678

Genome flux and stasis in a five millennium transect of European prehistory

PubMed Central

Gamba, Cristina; Jones, Eppie R.; Teasdale, Matthew D.; McLaughlin, Russell L.; Gonzalez-Fortes, Gloria; Mattiangeli, Valeria; Domboróczki, László; Kővári, Ivett; Pap, Ildikó; Anders, Alexandra; Whittle, Alasdair; Dani, János; Raczky, Pál; Higham, Thomas F. G.; Hofreiter, Michael; Bradley, Daniel G; Pinhasi, Ron

2014-01-01

The Great Hungarian Plain was a crossroads of cultural transformations that have shaped European prehistory. Here we analyse a 5,000-year transect of human genomes, sampled from petrous bones giving consistently excellent endogenous DNA yields, from 13 Hungarian Neolithic, Copper, Bronze and Iron Age burials including two to high (~22 × ) and seven to ~1 × coverage, to investigate the impact of these on Europe’s genetic landscape. These data suggest genomic shifts with the advent of the Neolithic, Bronze and Iron Ages, with interleaved periods of genome stability. The earliest Neolithic context genome shows a European hunter-gatherer genetic signature and a restricted ancestral population size, suggesting direct contact between cultures after the arrival of the first farmers into Europe. The latest, Iron Age, sample reveals an eastern genomic influence concordant with introduced Steppe burial rites. We observe transition towards lighter pigmentation and surprisingly, no Neolithic presence of lactase persistence. PMID:25334030

Genome flux and stasis in a five millennium transect of European prehistory.

PubMed

Gamba, Cristina; Jones, Eppie R; Teasdale, Matthew D; McLaughlin, Russell L; Gonzalez-Fortes, Gloria; Mattiangeli, Valeria; Domboróczki, László; Kővári, Ivett; Pap, Ildikó; Anders, Alexandra; Whittle, Alasdair; Dani, János; Raczky, Pál; Higham, Thomas F G; Hofreiter, Michael; Bradley, Daniel G; Pinhasi, Ron

2014-10-21

The Great Hungarian Plain was a crossroads of cultural transformations that have shaped European prehistory. Here we analyse a 5,000-year transect of human genomes, sampled from petrous bones giving consistently excellent endogenous DNA yields, from 13 Hungarian Neolithic, Copper, Bronze and Iron Age burials including two to high (~22 × ) and seven to ~1 × coverage, to investigate the impact of these on Europe's genetic landscape. These data suggest genomic shifts with the advent of the Neolithic, Bronze and Iron Ages, with interleaved periods of genome stability. The earliest Neolithic context genome shows a European hunter-gatherer genetic signature and a restricted ancestral population size, suggesting direct contact between cultures after the arrival of the first farmers into Europe. The latest, Iron Age, sample reveals an eastern genomic influence concordant with introduced Steppe burial rites. We observe transition towards lighter pigmentation and surprisingly, no Neolithic presence of lactase persistence.

The study of anatomy in England from 1700 to the early 20th century

PubMed Central

Mitchell, Piers D; Boston, Ceridwen; Chamberlain, Andrew T; Chaplin, Simon; Chauhan, Vin; Evans, Jonathan; Fowler, Louise; Powers, Natasha; Walker, Don; Webb, Helen; Witkin, Annsofie

2011-01-01

The study of anatomy in England during the 18th and 19th century has become infamous for bodysnatching from graveyards to provide a sufficient supply of cadavers. However, recent discoveries have improved our understanding of how and why anatomy was studied during the enlightenment, and allow us to see the context in which dissection of the human body took place. Excavations of infirmary burial grounds and medical school cemeteries, study of hospital archives, and analysis of the content of surviving anatomical collections in medical museums enables us to re-evaluate the field from a fresh perspective. The pathway from a death in poverty, sale of the corpse to body dealer, dissection by anatomist or medical student, and either the disposal and burial of the remains or preservation of teaching specimens that survive today in medical museums is a complex and fascinating one. PMID:21496014

Dispersal time for ancient human migrations: Americas and Europe colonization

NASA Astrophysics Data System (ADS)

Flores, J. C.

2007-07-01

I apply the recently proposed intermittence strategy to investigate the ancient human migrations in the world. That is, the Americas colonization (Bering-bridge and Pacific-coast theories) and Neanderthal replacement in Europe around 45000 years before the present. Using a mathematical equation related to diffusion and ballistic motion, I calculate the colonization time in all these cases in good agreement with archeological data (including Neolithic transition in Europe). Moreover, to support these calculations, I obtain analytically the effective speed of colonization in Europe veff=0.62 [km/yr] and related to the Aurignacian culture propagation.

The Evolution and Functional Impact of Human Deletion Variants Shared with Archaic Hominin Genomes

PubMed Central

Lin, Yen-Lung; Pavlidis, Pavlos; Karakoc, Emre; Ajay, Jerry; Gokcumen, Omer

2015-01-01

Allele sharing between modern and archaic hominin genomes has been variously interpreted to have originated from ancestral genetic structure or through non-African introgression from archaic hominins. However, evolution of polymorphic human deletions that are shared with archaic hominin genomes has yet to be studied. We identified 427 polymorphic human deletions that are shared with archaic hominin genomes, approximately 87% of which originated before the Human–Neandertal divergence (ancient) and only approximately 9% of which have been introgressed from Neandertals (introgressed). Recurrence, incomplete lineage sorting between human and chimp lineages, and hominid-specific insertions constitute the remaining approximately 4% of allele sharing between humans and archaic hominins. We observed that ancient deletions correspond to more than 13% of all common (>5% allele frequency) deletion variation among modern humans. Our analyses indicate that the genomic landscapes of both ancient and introgressed deletion variants were primarily shaped by purifying selection, eliminating large and exonic variants. We found 17 exonic deletions that are shared with archaic hominin genomes, including those leading to three fusion transcripts. The affected genes are involved in metabolism of external and internal compounds, growth and sperm formation, as well as susceptibility to psoriasis and Crohn’s disease. Our analyses suggest that these “exonic” deletion variants have evolved through different adaptive forces, including balancing and population-specific positive selection. Our findings reveal that genomic structural variants that are shared between humans and archaic hominin genomes are common among modern humans and can influence biomedically and evolutionarily important phenotypes. PMID:25556237

Continental margin sedimentation: From sediment transport to sequence stratigraphy

USGS Publications Warehouse

Nittrouer, Charles A.; Austin, James A.; Field, Michael E.; Kravitz, Joseph H.; Syvitski, James P. M.; Wiberg, Patricia L.

2007-01-01

This volume on continental margin sedimentation brings together an expert editorial and contributor team to create a state-of-the-art resource. Taking a global perspective, the book spans a range of timescales and content, ranging from how oceans transport particles, to how thick rock sequences are formed on continental margins.- Summarizes and integrates our understanding of sedimentary processes and strata associated with fluvial dispersal systems on continental shelves and slopes- Explores timescales ranging from particle transport at one extreme, to deep burial at the other- Insights are presented for margins in general, and with focus on a tectonically active margin (northern California) and a passive margin (New Jersey), enabling detailed examination of the intricate relationships between a wide suite of sedimentary processes and their preserved stratigraphy- Includes observational studies which document the processes and strata found on particular margins, in addition to numerical models and laboratory experimentation, which provide a quantitative basis for extrapolation in time and space of insights about continental-margin sedimentation- Provides a research resource for scientists studying modern and ancient margins, and an educational text for advanced students in sedimentology and stratigraphy

32 CFR 553.16 - Persons eligible for burial in Soldiers' Home National Cemetery.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 32 National Defense 3 2010-07-01 2010-07-01 true Persons eligible for burial in Soldiers' Home National Cemetery. 553.16 Section 553.16 National Defense Department of Defense (Continued) DEPARTMENT OF... eligible for burial in Soldiers' Home National Cemetery. The Board of Commissioners of the US Soldiers' and...

The burial of headwater streams in drainage pipes reduces in-stream nitrate retention: results from two US metropolitan areas

EPA Science Inventory

Urbanization causes stream degradation in various ways, but perhaps the most extreme example is the burial of streams in underground storm drains to facilitate above ground development or to promote the rapid conveyance of stormwater. Stream burial is extensive in urban basins (...

Underwater Munitions Expert System to Predict Mobility and Burial

DTIC Science & Technology

2017-11-14

exposure and aggregation for underwater munitions. 15. SUBJECT TERMS Underwater Munitions, Mobility, Burial, Application Programmer Interface...Munitions Expert System: Demonstration and Evaluation Report Acronyms API – Application Programmer Interface APL – Applied Physics...comparisons and traditional metrics such as the coefficient of correlation. The summary statistic for the comparisons of burial results

77 FR 64361 - Report on Waste Burial Charges: Changes in Decommissioning Waste Disposal Costs at Low-Level...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-19

... Decommissioning Waste Disposal Costs at Low-Level Waste Burial Facilities AGENCY: Nuclear Regulatory Commission... 15, ``Report on Waste Burial Charges: Changes in Decommissioning Waste Disposal Costs at Low-Level... for low-level waste. DATES: Submit comments by November 15, 2012. Comments received after this date...

Effects of urban stream burial on organic matter dynamics and reach scale nitrate retention - final

EPA Science Inventory

Nitrogen (N) retention in streams is an important ecosystem service that may be affected by the widespread burial of streams in stormwater pipes in urban watersheds. We predicted that stream burial suppresses the capacity of streams to retain nitrate (NO3 −) by eliminating primar...

77 FR 58591 - Report on Waste Burial Charges: Changes in Decommissioning Waste Disposal Costs at Low-Level...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-21

... NUCLEAR REGULATORY COMMISSION [NRC-2010-0362] Report on Waste Burial Charges: Changes in Decommissioning Waste Disposal Costs at Low-Level Waste Burial Facilities AGENCY: Nuclear Regulatory Commission... Commission) has issued for public comment a document entitled: NUREG-1307 Revision 15, ``Report on Waste...

The combined effects of sediment accretion (burial) and nutrient enrichment on the growth and propagation of Phalaris arundinacea

PubMed Central

Chen, Xinsheng; Liao, Yulin; Xie, Yonghong; Wu, Chao; Li, Feng; Deng, Zhengmiao; Li, Xu

2017-01-01

Sediment accretion (burial) and nutrient enrichment occur concurrently in lacustrine wetlands, but the role of these two aspects of sedimentation on macrophyte performance has rarely been examined. Here, we investigated the concurrent effects of sediment accretion and nutrient enrichment on the growth and propagation of Phalaris arundinacea L. using a factorial sediment burial by nutrient addition experimental design. Regardless of burial depth, nutrient addition increased biomass accumulation, shoot mass ratio, the number of rhizomes, and the length of ramets and rhizomes. While burial had little effect on plant growth and propagation, it had an interactive effect with nutrient addition on belowground growth and ramet production. These results indicate that P. arundinacea is tolerant to burial, which allows it to grow in habitats with high sedimentation rates. However, the enhanced growth and propagation of P. arundinacea following sedimentation were primarily related to nutrient enrichment. This suggests that nutrient enrichment of sediments, which occurs in many lacustrine wetlands, increases the risk of invasion by P. arundinacea. PMID:28054590

Ancient DNA Reveals Matrilineal Continuity in Present-Day Poland over the Last Two Millennia

PubMed Central

Juras, Anna; Dabert, Miroslawa; Kushniarevich, Alena; Malmström, Helena; Raghavan, Maanasa; Kosicki, Jakub Z.; Metspalu, Ene; Willerslev, Eske; Piontek, Janusz

2014-01-01

While numerous ancient human DNA datasets from across Europe have been published till date, modern-day Poland in particular, remains uninvestigated. Besides application in the reconstruction of continent-wide human history, data from this region would also contribute towards our understanding of the history of the Slavs, whose origin is hypothesized to be in East or Central Europe. Here, we present the first population-scale ancient human DNA study from the region of modern-day Poland by establishing mitochondrial DNA profiles for 23 samples dated to 200 BC – 500 AD (Roman Iron Age) and for 20 samples dated to 1000–1400 AD (Medieval Age). Our results show that mitochondrial DNA sequences from both periods belong to haplogroups that are characteristic of contemporary West Eurasia. Haplotype sharing analysis indicates that majority of the ancient haplotypes are widespread in some modern Europeans, including Poles. Notably, the Roman Iron Age samples share more rare haplotypes with Central and Northeast Europeans, whereas the Medieval Age samples share more rare haplotypes with East-Central and South-East Europeans, primarily Slavic populations. Our data demonstrates genetic continuity of certain matrilineages (H5a1 and N1a1a2) in the area of present-day Poland from at least the Roman Iron Age until present. As such, the maternal gene pool of present-day Poles, Czechs and Slovaks, categorized as Western Slavs, is likely to have descended from inhabitants of East-Central Europe during the Roman Iron Age. PMID:25337992

Why did ancient people have atherosclerosis?: from autopsies to computed tomography to potential causes.

PubMed

Thomas, Gregory S; Wann, L Samuel; Allam, Adel H; Thompson, Randall C; Michalik, David E; Sutherland, M Linda; Sutherland, James D; Lombardi, Guido P; Watson, Lucia; Cox, Samantha L; Valladolid, Clide M; Abd El-Maksoud, Gomaa; Al-Tohamy Soliman, Muhammad; Badr, Ibrahem; el-Halim Nur el-Din, Abd; Clarke, Emily M; Thomas, Ian G; Miyamoto, Michael I; Kaplan, Hillard S; Frohlich, Bruno; Narula, Jagat; Stewart, Alexandre F R; Zink, Albert; Finch, Caleb E

2014-06-01

Computed tomographic findings of atherosclerosis in the ancient cultures of Egypt, Peru, the American Southwest and the Aleutian Islands challenge our understanding of the fundamental causes of atherosclerosis. Could these findings be true? Is so, what traditional risk factors might be present in these cultures that could explain this apparent paradox? The recent computed tomographic findings are consistent with multiple autopsy studies dating as far back as 1852 that demonstrate calcific atherosclerosis in ancient Egyptians and Peruvians. A nontraditional cause of atherosclerosis that could explain this burden of atherosclerosis is the microbial and parasitic inflammatory burden likely to be present in ancient cultures inherently lacking modern hygiene and antimicrobials. Patients with chronic systemic inflammatory diseases of today, including systemic lupus erythematosus, rheumatoid arthritis, and human immunodeficiency virus infection, experience premature atherosclerosis and coronary events. Might the chronic inflammatory load of ancient times secondary to infection have resulted in atherosclerosis? Smoke inhalation from the use of open fires for daily cooking and illumination represents another potential cause. Undiscovered risk factors could also have been present, potential causes that technologically cannot currently be measured in our serum or other tissue. A synthesis of these findings suggests that a gene-environmental interplay is causal for atherosclerosis. That is, humans have an inherent genetic susceptibility to atherosclerosis, whereas the speed and severity of its development are secondary to known and potentially unknown environmental factors. Copyright © 2014 World Heart Federation (Geneva). Published by Elsevier B.V. All rights reserved.

Effects of sand burial on dew deposition on moss soil crust in a revegetated area of the Tennger Desert, Northern China

NASA Astrophysics Data System (ADS)

Jia, Rong-liang; Li, Xin-rong; Liu, Li-chao; Pan, Yan-xia; Gao, Yan-hong; Wei, Yong-ping

2014-11-01

Sand burial and dew deposition are two fundamental phenomena profoundly influencing biological soil crusts in desert areas. However, little information is available regarding the effects of sand burial on dew deposition on biological soil crusts in desert ecosystems. In this study, we evaluated the effects of sand burial at depths of 0 (control), 0.5, 1, 2 and 4 mm on dew formation and evaporation of three dominant moss crusts in a revegetated area of the Tengger Desert (Northern China) in 2010. The results revealed that sand burial significantly decreased the amount of dew deposited on the three moss crust types by acting as a semi-insulator retarding the dew formation and evaporation rates. The changes in surface temperature cannot fully explain the variations of the formation and evaporation rates of dew by moss crusts buried by sand. The extension of dew retention time was reflected by the higher dew ratios (the ratio of dew amount at a certain time to the maximum value in a daily course) in the daytime, and may to some extent have acted as compensatory mechanisms that diminished the negative effects of the reduction of dew amount induced by sand burial of moss crusts. The resistances to reduction of dewfall caused by sand burial among the three moss crusts were also compared and it was found that Bryum argenteum crust showed the highest tolerance, followed by crusts dominated by Didymodon vinealis and Syntrichia caninervis. This sequence corresponds well with the successional order of the three moss crusts in the revegetated area, thereby suggesting that resistance to reduction of dewfall may act as one mechanism by which sand burial drives the succession of moss crusts in desert ecosystems. This side effect of dew reduction induced by sand burial on biological soil crusts should be considered in future ecosystem construction and management of desert area.

Sediment accretion and organic carbon burial relative to sea-level rise and storm events in two mangrove forests in Everglades National Park

USGS Publications Warehouse

Smoak, Joseph M.; Breithaupt, Joshua L.; Smith, Thomas J.; Sanders, Christian J.

2013-01-01

The goal of this investigation was to examine how sediment accretion and organic carbon (OC) burial rates in mangrove forests respond to climate change. Specifically, will the accretion rates keep pace with sea-level rise, and what is the source and fate of OC in the system? Mass accumulation, accretion and OC burial rates were determined via 210Pb dating (i.e. 100 year time scale) on sediment cores collected from two mangrove forest sites within Everglades National Park, Florida (USA). Enhanced mass accumulation, accretion and OC burial rates were found in an upper layer that corresponded to a well-documented storm surge deposit. Accretion rates were 5.9 and 6.5 mm yr−1 within the storm deposit compared to overall rates of 2.5 and 3.6 mm yr−1. These rates were found to be matching or exceeding average sea-level rise reported for Key West, Florida. Organic carbon burial rates were 260 and 393 g m−2 yr−1 within the storm deposit compared to 151 and 168 g m−2 yr−1 overall burial rates. The overall rates are similar to global estimates for OC burial in marine wetlands. With tropical storms being a frequent occurrence in this region the resulting storm surge deposits are an important mechanism for maintaining both overall accretion and OC burial rates. Enhanced OC burial rates within the storm deposit could be due to an increase in productivity created from higher concentrations of phosphorus within storm-delivered sediments and/or from the deposition of allochthonous OC. Climate change-amplified storms and sea-level rise could damage mangrove forests, exposing previously buried OC to oxidation and contribute to increasing atmospheric CO2 concentrations. However, the processes described here provide a mechanism whereby oxidation of OC would be limited and the overall OC reservoir maintained within the mangrove forest sediments.

A New Interpretation of the Transport and Erection of Large Obelisks by Ancient Egyptian Engineers or Englebach Revisited.

ERIC Educational Resources Information Center

Spry, William J.

In the teaching of archaeology at the university level there is often conflict between the engineer and the humanist when looking at archaeological evidence. Nowhere is this more clear than in considering the very old puzzle of how ancient Egyptian engineers transported and erected huge stone obelisks using only human labor. The humanist, whose…

Neonatal medicine in ancient art.

PubMed

Yurdakök, Murat

2010-01-01

There are a limited number of artistic objects from ancient times with particular importance in neonatal medicine. The best examples are figurines from ancient Egypt of Isis nursing Horus, showing the importance of breastfeeding. The earliest images of the human fetus were made by the Olmecs in Mexico around 1200- 400 BCE. One of the earliest representations of congenital anomalies is a figurine of diencephalic twins thought to be the goddess of Anatolia, dated to around 6500 BCE. In addition to these figurines, three sets of twins in the ancient world have medical importance, and Renaissance artists often used them as a subject for their paintings: "direct suckling animals" (Romulus and Remus), "heteropaternal superfecundation" (mother: Leda, fathers: Zeus, the king of the Olympian gods, and Leda's husband, Tyndareus), and "twin-to-twin transfusion" in monozygotic twins (Jacob and Esau).

Sensitivity of climate and atmospheric CO2 to deep-ocean and shallow-ocean carbonate burial

NASA Technical Reports Server (NTRS)

Volk, Tyler

1989-01-01

A model of the carbonate-silicate geochemical cycle is presented that distinguishes carbonate masses produced by shallow-ocean and deep-ocean carbonate burial and shows that reasonable increases in deep-ocean burial could produce substantial warmings over a few hundred million years. The model includes exchanges between crust and mantle; transients from burial shifts are found to be sensitive to the fraction of nondegassed carbonates subducted into the mantle. Without the habitation of the open ocean by plankton such as foraminifera and coccolithophores, today's climate would be substantially colder.

The Amazing Labyrinth: An Ancient-Modern Humanities Unit

ERIC Educational Resources Information Center

Ladensack, Carl

1973-01-01

The image of the labyrinth from mythology can find modern day parallelisms in architecture, art, music, and literature--all of which contributes to a humanities unit combining the old with the new. (MM)

The Diversity of REcent and Ancient huMan (DREAM): A New Microarray for Genetic Anthropology and Genealogy, Forensics, and Personalized Medicine.

PubMed

Elhaik, Eran; Yusuf, Leeban; Anderson, Ainan I J; Pirooznia, Mehdi; Arnellos, Dimitrios; Vilshansky, Gregory; Ercal, Gunes; Lu, Yontao; Webster, Teresa; Baird, Michael L; Esposito, Umberto

2017-12-01

The human population displays wide variety in demographic history, ancestry, content of DNA derived from hominins or ancient populations, adaptation, traits, copy number variation, drug response, and more. These polymorphisms are of broad interest to population geneticists, forensics investigators, and medical professionals. Historically, much of that knowledge was gained from population survey projects. Although many commercial arrays exist for genome-wide single-nucleotide polymorphism genotyping, their design specifications are limited and they do not allow a full exploration of biodiversity. We thereby aimed to design the Diversity of REcent and Ancient huMan (DREAM)-an all-inclusive microarray that would allow both identification of known associations and exploration of standing questions in genetic anthropology, forensics, and personalized medicine. DREAM includes probes to interrogate ancestry informative markers obtained from over 450 human populations, over 200 ancient genomes, and 10 archaic hominins. DREAM can identify 94% and 61% of all known Y and mitochondrial haplogroups, respectively, and was vetted to avoid interrogation of clinically relevant markers. To demonstrate its capabilities, we compared its FST distributions with those of the 1000 Genomes Project and commercial arrays. Although all arrays yielded similarly shaped (inverse J) FST distributions, DREAM's autosomal and X-chromosomal distributions had the highest mean FST, attesting to its ability to discern subpopulations. DREAM performances are further illustrated in biogeographical, identical by descent, and copy number variation analyses. In summary, with approximately 800,000 markers spanning nearly 2,000 genes, DREAM is a useful tool for genetic anthropology, forensic, and personalized medicine studies. © The Author(s) 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

[The relations between music and medicine in history and present].

PubMed

Gasenzer, E R; Neugebauer, E A M

2011-12-01

Since the ancient world relations exist between music and medicine. In the prehistoric music, dance, rhythm and religious practice were important parts of shamanism and early medical procedures. Important philosophers of the classic period already began with the scientific research of musical and medical questions. During the middle age convents conserved ancient knowledge. They offered medical care and taught the ancient knowledge of medicine, arts and music. The Gregorian choral was created. Traditions of popular believe expressed the relations between music and medicine. The Renaissance became the great époque of art, music and science. Leonardo da Vinci and Andreas Vesalius presented a new style of artistic working and scientific knowledge. Also the basics of western music, like tonality was developed. With the separation of scientific subjects in natural sciences and humanities, the relationships between music and medicine fall into oblivion. During the classic and romantic era music and art were important parts of cultural live of the well educated society. With the development of neurology, psychiatry and psychoanalysis more physicians and scientists were interested in musical questions. Questions about the role of music in human behavior and the ancient method to use music in medical treatment became popular. In the early 20th century the music therapy was developed. Today the effects of music to the human brain are investigated with radionuclear methods. A lot of investigations showed the effect of music and music performance to humans. Music plays an important part in psychotherapy, therapeutic pedagogy and medical care, the importance of music and music therapy increases. In the 80ies of the 20th century the performing arts medicine was developed, which asks for the medical problems of performing musicians. © Georg Thieme Verlag KG Stuttgart · New York.

The clumped isotope geothermometer in soil and paleosol carbonate

NASA Astrophysics Data System (ADS)

Quade, J.; Eiler, J.; Daëron, M.; Achyuthan, H.

2013-03-01

We studied both modern soils and buried paleosols in order to understand the relationship of temperature (T°C(47)) estimated from clumped isotope compositions (Δ47) of soil carbonates to actual surface and burial temperatures. Carbonates from modern soils with differing rainfall seasonality were sampled from Arizona, Nevada, Tibet, Pakistan, and India. T°C(47) obtained from these soils shows that soil carbonate forms in the warmest months of the year, in the late morning to afternoon, and probably in response to intense soil dewatering. T°C(47) obtained from modern soil carbonate ranges from 10.8 to 39.5 °C. On average, T°C(47) exceeds mean annual temperature by 10-15 °C due to summertime bias in soil carbonate formation, and to summertime ground heating by incident solar radiation. Secondary controls on T°C(47) are soil depth and shading. Site mean annual air temperature (MAAT) across a broad range (0-30 °C) of site temperatures is highly correlated with T°C(47) from soils, following the equation: MAAT(°C)=1.20(T°C(47)0)-21.72(r2=0.92) where T°C(47)0 is the effective air temperature at the site estimated from T°C(47). The effective air temperature represents the air temperature required to account for the T°C(47) at each site, after consideration of variations in T°C(47) with soil depth and ground heating. The highly correlated relationship in this equation should now permit mean annual temperature in the past to be reconstructed from T°C(47) in paleosol carbonate, assuming one is studying paleosols that formed in environments generally similar in seasonality and ground cover to our calibration sites. T°C(47)0 decreases systematically with elevation gain in the Himalaya, following the equation: elevation(m)=-229(T°C(47)0)+9300(r2=0.95) Assuming that temperature varied similarly with elevation in the past, this equation can be used to reconstruct paleoelevation from clumped isotope analysis of ancient soil carbonates. We also measured T°C(47) from long sequences of deeply buried (⩽5 km) paleosol carbonate in the Himalayan foreland in order to evaluate potential diagenetic resetting of clumped isotope composition. We found that paleosol carbonate faithfully records plausible soil T°C(47) down to 2.5-4 km burial depth, or ˜90-125 °C. Deeper than this and above this temperature, T°C(47) in paleosol carbonate is reset to temperatures >40 °C. We observe ˜40 °C as the upper limit for T°C(47) in modern soils from soil depths >25 cm, and therefore that T°C(47) >40 °C obtained from ancient soil carbonate indicates substantially warmer climate regimes compared to the present, or non-primary temperatures produced by resetting during diagenesis. If representative, this limits the use of T°C(47) to reconstruct ancient surface temperature to modestly buried (<3-4 km) paleosol carbonates. Despite diagenetic resetting of Δ47 values, δ18O and δ13C values of the same deeply buried paleosol carbonate appear unaltered. We conclude that solid-state reordering or recrystallization of clumping of carbon and oxygen isotopes can occur in the absence of open-system exchange of paleosol carbonate with significant quantities of water or other phases.

Conservation archaeogenomics: ancient DNA and biodiversity in the Anthropocene.

PubMed

Hofman, Courtney A; Rick, Torben C; Fleischer, Robert C; Maldonado, Jesús E

2015-09-01

There is growing consensus that we have entered the Anthropocene, a geologic epoch characterized by human domination of the ecosystems of the Earth. With the future uncertain, we are faced with understanding how global biodiversity will respond to anthropogenic perturbations. The archaeological record provides perspective on human-environment relations through time and across space. Ancient DNA (aDNA) analyses of plant and animal remains from archaeological sites are particularly useful for understanding past human-environment interactions, which can help guide conservation decisions during the environmental changes of the Anthropocene. Here, we define the emerging field of conservation archaeogenomics, which integrates archaeological and genomic data to generate baselines or benchmarks for scientists, managers, and policy-makers by evaluating climatic and human impacts on past, present, and future biodiversity. Copyright © 2015 Elsevier Ltd. All rights reserved.

Unique parasite aDNA in moa coprolites from New Zealand suggests mass parasite extinctions followed human-induced megafauna extinctions

USGS Publications Warehouse

Lafferty, Kevin D.; Hopkins, Skylar R.

2018-01-01

Having split early from Gondwana, Zealandia (now modern New Zealand) escaped discovery until the late 13th century, and therefore remains an important glimpse into a human-free world. Without humans or other land mammals, diverse and peculiar birds evolved in isolation, including several flightless moa species, the giant pouakai eagle (Harpagornis moorei), the kiwi (Apteryx mantelli), and the kakapo parrot (Strigops habroptila). This unique community has fascinated paleoecologists, who have spent almost two centuries devising new ways to glean information from ancient bird remains. In PNAS, Boast et al. (1) apply one recent technological advance, ancient DNA (aDNA) metabarcoding, to confirm previous discoveries and report new details about moa and kakapo diets, parasites, and niches. Their efforts confirm Zealandia was a lot different before humans arrived.

Low oxygen and argon in the Neoproterozoic atmosphere at 815 Ma

NASA Astrophysics Data System (ADS)

Yeung, Laurence Y.

2017-12-01

The evolution of Earth's atmosphere on >106-yr timescales is tied to that of the deep Earth. Volcanic degassing, weathering, and burial of volatile elements regulates their abundance at the surface, setting a boundary condition for the biogeochemical cycles that modulate Earth's atmosphere and climate. The atmosphere expresses this interaction through its composition; however, direct measurements of the ancient atmosphere's composition more than a million years ago are notoriously difficult to obtain. Gases trapped in ancient minerals represent a potential archive of the ancient atmosphere, but their fidelity has not been thoroughly evaluated. Both trapping and preservation artifacts may be relevant. Here, I use a multi-element approach to reanalyze recently collected fluid-inclusion data from halites purportedly containing snapshots of the ancient atmosphere as old as 815 Ma. I argue that those samples were affected by the concomitant trapping of air dissolved in brines and contaminations associated with modern air. These artifacts lead to an apparent excess in O2 and Ar. The samples may also contain signals of mass-dependent fractionation and biogeochemical cycling within the fluid inclusions. After consideration of these artifacts, this new analysis suggests that the Tonian atmosphere was likely low in O2, containing ≤10% present atmospheric levels (PAL), not ∼50% PAL as the data would suggest at face value. Low concentrations of O2 are consistent with other geochemical constraints for this time period and further imply that the majority of Neoproterozoic atmospheric oxygenation occurred after 815 Ma. In addition, the analysis reveals a surprisingly low Tonian Ar inventory-≤60% PAL-which, if accurate, challenges our understanding of the solid Earth's degassing history. When placed in context with other empirical estimates of paleo-atmospheric Ar, the data imply a period of relatively slow atmospheric Ar accumulation in the Paleo- and Meso-Proterozoic, followed by extensive degassing in the late Neoproterozoic or early Cambrian, before returning to a relatively quiescent state by the Devonian. This two-step structure resembles that for the evolution of atmospheric O2, hinting at a common driving force from the deep Earth. Some caution is warranted, however, because still more enigmatic contaminations than the ones presented here may be relevant. Gases trapped in minerals may offer important constraints on the evolution of Earth's surface, climate, and atmosphere, but potential contaminations and other confounding factors need to be considered carefully before these records can be considered quantitative.

A brief journey into medical care and disease in ancient Egypt.

PubMed Central

Sullivan, R

1995-01-01

Ancient Egypt was one of the greatest civilizations to have arisen, becoming the cradle of scientific enquiry and social development over 3 millennia; undoubtedly its knowledge of medicine has been vastly underestimated. Few artefacts survive which describe the medical organization, but from the extent of the diseases afflicting that ancient populus there would have been much to study. Evidence from papyri, tomb bas reliefs and the writings of historians of antiquity tell of an intense interest in the sciences, humanities and medicine born of an educated society which had overcome the superstitions of its nomadic ancestors. Images Figure 1 Figure 2 Figure 3 PMID:7752157

V-shaped Pits in Regions of Ancient Baekje Kingdom Paleoparasitologically Confirmed as Likely Human-Waste Reservoirs

PubMed Central

Shin, Dong Hoon; Shim, Sang-Yuck; Kim, Myeung Ju; Oh, Chang Seok; Lee, Mi-Hyun; Jung, Suk Bae; Lee, Geon Il; Chai, Jong-Yil

2014-01-01

In a paleo-parasitological analysis of soil samples obtained from V-shaped pits dating to the ancient Baekje period in Korean history, we discovered Ascaris lumbricoides, Trichuris trichiura, and Clonorchis sinensis eggs. In light of the samples' seriously contaminated state, the V-shaped pits might have served as toilets, cesspits, or dung heaps. For a long period of time, researchers scouring archaeological sites in Korea have had difficulties locating such structures. In this context then, the present report is unique because similar kind of the ancient ruins must become an ideal resource for successful sampling in our forthcoming paleoparasitological studies. PMID:25352710

Hydrology of the Melton Valley radioactive-waste burial grounds at Oak Ridge National Laboratory, Tennessee

USGS Publications Warehouse

Webster, D.A.; Bradley, Michael W.

1988-01-01

Burial grounds 4, 5, and 6 of the Melton Valley Radioactive-waste Burial Grounds, Oak Ridge, TN, were used sequentially from 1951 to the present for the disposal of solid, low level radioactive waste by burial in shallow trenches and auger holes. Abundant rainfall, a generally thin unsaturated zone, geologic media of inherently low permeability, and the operational practices employed have contributed to partial saturation of the buried waste, leaching of radionuclides, and transport of dissolved matter from the burial areas. Two primary methods of movement of wastes from these sites are transport in groundwater, and the overflow of fluid in trenches and subsequent flow across land surface. Whiteoak Creek and its tributaries receive all overland flow from trench spillage, surface runoff from each site, and discharge of groundwater from the regolith of each site. Potentiometric data, locally, indicate that this drainage system also receives groundwater discharges from the bedrock of burial ground 5. By projection of the bedrock flow patterns characteristic of this site to other areas of Melton Valley, it is inferred that discharges from the bedrock underlying burial grounds 4 and 6 also is to the Whiteoak Creek drainage system. The differences in potentiometric heads and a comparatively thin saturated zone in bedrock do not favor the development of deep flow through bedrock from one river system to another. (USGS)

Burial and thermal history of the central Appalachian basin, based on three 2-D models of Ohio, Pennsylvania, and West Virginia

USGS Publications Warehouse

Rowan, Elisabeth L.

2006-01-01

Introduction: Three regional-scale, cross sectional (2-D) burial and thermal history models are presented for the central Appalachian basin based on the detailed geologic cross sections of Ryder and others (2004), Crangle and others (2005), and Ryder, R.T., written communication. The models integrate the available thermal and geologic information to constrain the burial, uplift, and erosion history of the region. The models are restricted to the relatively undeformed part of the basin and extend from the Rome trough in West Virginia and Pennsylvania northwestward to the Findlay arch in Ohio. This study expands the scope of previous work by Rowan and others (2004) which presented a preliminary burial/thermal history model for a cross section (E-E') through West Virginia and Ohio. In the current study, the burial/thermal history model for E-E' is revised, and integrated with results of two additional cross sectional models (D-D' and C-C'). The burial/thermal history models provide calculated thermal maturity (Ro%) values for the entire stratigraphic sequence, including hydrocarbon source rocks, along each of the three cross sections. In contrast, the Ro and conodont CAI data available in the literature are sparse and limited to specific stratigraphic intervals. The burial/thermal history models also provide the regional temperature and pressure framework that is needed to model hydrocarbon migration.

GPR survey, as one of the best geophysical methods for social and industrial needs

NASA Astrophysics Data System (ADS)

Chernov, Anatolii

2016-04-01

This paper is about ways and methods of applying non-invasive geophysical method - Ground penetrating radar (GPR) survey in different spheres of science, industry, social life and culture. Author would like to show that geological methods could be widely used for solving great variety of industrial, human safety and other problems. In that article, we take GPR survey as an example of such useful geophysical methods. It is a fact that investigation of near surface underground medium is important process, which influence on development of different spheres of science and social life: investigation of near surface geology (layering, spreading of rock types, identification of voids, etc.), hydrogeology (depth to water horizons, their thickness), preparation step for construction of roads and buildings (civil geology, engineering geology), investigation of cultural heritage (burial places, building remains,...), ecological investigations (land slides, variation in underground water level, etc.), glaciology. These tasks can be solved by geological methods, but as usual, geophysical survey takes a lot of time and energy (especially electric current and resistivity methods, seismic survey). Author claims that GPR survey can be performed faster than other geophysical surveys and results of GPR survey are informative enough to make proper conclusions. Some problems even cannot be solved without GPR. For example, identification of burial place (one of author's research objects): results of magnetic and electric resistivity tomography survey do not contain enough information to identify burial place, but according to anomalies on GPR survey radarograms, presence of burial place can be proven. Identification of voids and non-magnetic objects also hardly can be done by another non-invasive geophysics surveys and GPR is applicable for that purpose. GPR can be applied for monitoring of dangerous processes in geological medium under roads, buildings, parks and other places of human activity. Monitoring of such hazards as landslides, underground erosion, variation in ground water level can help prevent dangerous processes with destructive consequences, which can result in peoples' injuries and even death. Moreover, GPR can be used in other spheres of life, where investigation of hidden (under or behind conductive for electromagnetic wave material) objects is needed: rescue operations (finding of people after natural and human-made disasters under snow, under debris of building material); military purpose (security systems, identification of people presence through walls, doors, ground etc.). Author work on algorithms (first of all for VIY GPRs (http://viy.ua/)), which will help more precisely find objects of interest on radarograms and even solve inverse problem of geophysics. According to information in that article, geophysical methods can be widely used to solve great variety of tasks and help to investigate humans' past (researches of cultural heritage) and provide information to create safe and comfortable future (preventing of natural hazards and better planning of construction).

75 FR 67454 - Allowance for Private Purchase of an Outer Burial Receptacle in Lieu of a Government-Furnished...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-02

... DEPARTMENT OF VETERANS AFFAIRS Allowance for Private Purchase of an Outer Burial Receptacle in... Department of Veterans Affairs (VA) to provide a monetary allowance towards the private purchase of an outer..., Section 213, VA may provide a monetary allowance for the private purchase of an outer burial receptacle...

75 FR 1454 - Allowance for Private Purchase of an Outer Burial Receptacle in Lieu of a Government-Furnished...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-11

... DEPARTMENT OF VETERANS AFFAIRS Allowance for Private Purchase of an Outer Burial Receptacle in... Department of Veterans Affairs (VA) to provide a monetary allowance towards the private purchase of an outer..., Section 213, VA may provide a monetary allowance for the private purchase of an outer burial receptacle...

78 FR 76712 - Allowance for Private Purchase of an Outer Burial Receptacle in Lieu of a Government-Furnished...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-12-18

... DEPARTMENT OF VETERANS AFFAIRS Allowance for Private Purchase of an Outer Burial Receptacle in... Department of Veterans Affairs (VA) to provide a monetary allowance towards the private purchase of an outer..., Section 213, VA may provide a monetary allowance for the private purchase of an outer burial receptacle...

The burial of headwater streams in drainage pipes reduces in-stream nitrate retention: results from two US metropolitan areas

EPA Science Inventory

Nitrogen (N) retention in stream networks is an important ecosystem service that may be affected by the widespread burial of headwater streams in urban watersheds. Stream burial occurs when segments of a channel are encased in drainage pipe and buried beneath the land surface to...

Modeling dynamic accumulation of gas hydrates in Shenhu area, northern South China Sea

NASA Astrophysics Data System (ADS)

Su, Z.; Cao, Y.; Wu, N.

2013-12-01

The accumulation of the hydrates in Shenhu area on northern continental slope of the South China Sea (SCS) could not be well quantified by the numerical models. The formation mechanism of the hydrate deposits remains an open question. Here, a conceptual model was applied for illustrating the formation pattern of hydrate accumulation in Shenhu area based on the studies of sedimentary and tectonic geologies. Our results indicated that the present hydrate deposits were a development of 'ancient hydrates' in the faulted sediment. The dynamic accumulation of the hydrates was further quantified by using a numerical model with two controlling parameters of seafloor sedimentation rate and water flow rate. The model results were testified with the hydrate saturations derived from the chloride abnormalities at site SH2 in Shenhu area. It suggested that the hydrate accumulation in Shenhu area had experienced two typical stages. In the first stage, the gas hydrates grew in the fractured sediment ~1.5 Ma. High permeability of the fractured sediment permitted rapid water flow that carrying methane gas toward the seafloor. Massive gas transformed to gas hydrate in the gas hydrate stability zone (GHSZ) at water flow rate of 50m/kyr within 40kyrs. The 'ancient hydrate' filled 20% volume of the sediment pores in the stage. The second stage was initiated after ending of the last faulting activity. The water flow rate dropped to 0.7m/kyr due to quick burial of fine-grained sediments. Inadequate gas supply could merely sustain hydrate growth slowly at the base of GHSZ, and ultimately yielded the current hydrate deposits in Shenhu area after a subsequent evolution of 1.5 Myrs.

Between a rock and a soft place: Using optical ages to date ancient clam gardens on the Pacific Northwest

PubMed Central

Neudorf, Christina M.; Smith, Nicole; Lepofsky, Dana; Toniello, Ginevra; Lian, Olav B.

2017-01-01

Rock-walled archaeological features are notoriously hard to date, largely because of the absence of suitable organic material for radiocarbon dating. This study demonstrates the efficacy of dating clam garden wall construction using optical dating, and uses optical ages to determine how sedimentation rates in the intertidal zone are affected by clam garden construction. Clam gardens are rock-walled, intertidal terraces that were constructed and maintained by coastal First Nation peoples to increase bivalve habitat and productivity. These features are evidence of ancient shellfish mariculture on the Pacific Northwest and, based on radiocarbon dating, date to at least the late Holocene. Optical dating exploits the luminescence signals of quartz or feldspar minerals to determine the last time the minerals were exposed to sunlight (i.e., their burial age), and thus does not require the presence of organic material. Optical ages were obtained from three clam garden sites on northern Quadra Island, British Columbia, and their reliability was assessed by comparing them to radiocarbon ages derived from shells underneath the clam garden walls, as well as below the terrace sediments. Our optical and radiocarbon ages suggest that construction of these clam garden walls commenced between ~1000 and ~1700 years ago, and our optical ages suggest that construction of the walls was likely incremental and increased sedimentation rates in the intertidal zone by up to fourfold. Results of this study show that when site characteristics are not amenable to radiocarbon dating, optical dating may be the only viable geochronometer. Furthermore, dating rock-walled marine management features and their geomorphic impact can lead to significant advances in our understanding of the intimate relationships that Indigenous peoples worldwide developed with their seascapes. PMID:28182645

Exploring Biological and Geological Age-related Changes through Variations in Intra- and Intertooth Proteomes of Ancient Dentine.

PubMed

Procopio, Noemi; Chamberlain, Andrew T; Buckley, Michael

2018-03-02

Proteomic analyses are becoming more widely used in archeology not only due to the greater preservation of proteins in ancient specimens than DNA but also because they can offer different information, particularly relating to compositional preservation and potentially a means to estimate biological and geological age. However, it remains unclear to what extent different burial environments impact these aspects of proteome decay. Teeth have to date been much less studied than bone but are ideal to explore how proteins decay with time due to the negligible turnover that occurs in dentine relative to bone. We investigated the proteome variability and deamidation levels of different sections of molar teeth from archeological bovine mandibles as well as their mandibular bone. We obtained a greater yield of proteins from the crown of the teeth but did not find differences between the different molars analyzed within each mandible. We also obtained the best variety of protein from a well-preserved mandible that was not the youngest one in terms of chronological age, showing the influence of the preservation conditions on the final proteomic outcome. Intriguingly, we also noticed an increase in abundance levels of fetuin-A in biologically younger mandibles as reported previously, but the opposite trend in tooth dentine. Interestingly, we observed higher glutamine deamidation levels in teeth from the geologically oldest mandible despite it being the biologically youngest specimen, showing that the archeological age strongly impacts on the level of deamidations observed, much more so than biological aging. This indicates that the glutamine deamidation ratio of selected peptides may act as a good predictor of the relative geochronological age of archeological specimens.

Using Google Earth To Interpret The Southern Taiwan Hsiaolin Village Catastrophe

NASA Astrophysics Data System (ADS)

Lin, Y. H.; Huang, C. M.; Keck, J.; Wei, L. W.; Pan, K. L.

2012-04-01

The August, 2009 Typhoon Morakot resulted in accumulated rainfalls exceeding 2000 mm and the triggering of a massive debris flow that buried Hsiaolin village. Hundreds of people were killed and both domestic and international natural disaster prevention agencies took note of this large scale disaster that was not prevented. Interpretation of Google Earth satellite images reveals that the Hsiaolin debris flow originated in a single location and then split into two parts. The northern debris flow, the smaller of the two parts, flowed within a ravine. The southern part of the debris flow, much larger than the northern part, was responsible for the burial of Hsiaolin village. The movement of the debris flow can be divided into three processes. First a slope failure and subsequent debris flow occurred within a curved ravine. Second, the debris flow eroded the bank of the ravine laterally, causing translational failure of the ravine walls. A massive debris flow, made up of a combination of materials from both the original debris flow and the ravine walls, jammed within the ravine. Finally, as a result of the jam, the debris flow was redirected towards Hsiaolin village. Overlaying locations of the post-Hsiaolin debris flow landforms on top of pre-failure satellite images reveals that characteristics of the post failure landforms match perfectly with characteristics observed in the pre-failure satellite images. This finding supports the thought that large scale geologic disasters are reoccurring. This finding also suggests that areas near villages can use simple satellite image analysis to rapidly identify ancient landslides and that such information may help early evacuation planning. With such planning, property and life losses due to natural disasters can be reduced. Key word: Hsiaolin Village, Debris Flow, Remote Sensing, Image Interpretation, Cause of Disaster, Disaster Recovery, Deep-Seated Landslide, Ancient Debris Flow

Effects of sand burial and wind disturbances on moss soil crusts in a revegetated area of the Tennger Desert, Northern China

NASA Astrophysics Data System (ADS)

Jia, R. L.; Li, X. R.; Liu, L. C.; Gao, Y. H.

2012-04-01

Sand burial and wind are two predominant natural disturbances in the desert ecosystems worldwide. However, the effects of sand burial and wind disturbances on moss soil crusts are still largely unexplored. In this study, two sets of experiments were conducted separately to evaluated the effects of sand burial (sand depth of 0, 1, 2, 3 and 4 mm) and wind blowing (wind speed of 0.2, 3, 6 and 9ms-1) on ecophysiological variables of two moss soil crusts collected from a revegetated area of the Tengger Desert, Northern China. Firstly, the results from the sand burial experiment revealed that respiration rate was significantly decreased and that moss shoot elongation was significantly increased after burial. In addition, Bryum argenteum crust showed the fastest speed of emergence and highest tolerance index, followed by Didymodon vinealis crust. This sequence was consistent with the successional order of the two moss crusts that happened in our study area, indicating that differential sand burial tolerance explains their succession sequence. Secondly, the results from the wind experiment showed that CO2 exchange, PSII photochemical efficiency, photosynthetic pigments, shoot upgrowth, productivity and regeneration potential of the two moss soil crust mentioned above were all substantially depressed. Furthermore, D. vinealis crust exhibited stronger wind resistance than B. argenteum crust from all aspects mentioned above. And this is comparison was identical with their contrasting microhabitats with B. argenteum crust being excluded from higher wind speed microsites in the windward slopes, suggesting that the differential wind resistance of moss soil crusts explains their microdistribution pattern. In conclusion, the ecogeomorphological processes of moss soil crusts in desert ecosystems can be largely determined by natural disturbances caused by sand burial and wind blowing in desert ecosystems.

Information and redundancy in the burial folding code of globular proteins within a wide range of shapes and sizes.

PubMed

Ferreira, Diogo C; van der Linden, Marx G; de Oliveira, Leandro C; Onuchic, José N; de Araújo, Antônio F Pereira

2016-04-01

Recent ab initio folding simulations for a limited number of small proteins have corroborated a previous suggestion that atomic burial information obtainable from sequence could be sufficient for tertiary structure determination when combined to sequence-independent geometrical constraints. Here, we use simulations parameterized by native burials to investigate the required amount of information in a diverse set of globular proteins comprising different structural classes and a wide size range. Burial information is provided by a potential term pushing each atom towards one among a small number L of equiprobable concentric layers. An upper bound for the required information is provided by the minimal number of layers L(min) still compatible with correct folding behavior. We obtain L(min) between 3 and 5 for seven small to medium proteins with 50 ≤ Nr ≤ 110 residues while for a larger protein with Nr = 141 we find that L ≥ 6 is required to maintain native stability. We additionally estimate the usable redundancy for a given L ≥ L(min) from the burial entropy associated to the largest folding-compatible fraction of "superfluous" atoms, for which the burial term can be turned off or target layers can be chosen randomly. The estimated redundancy for small proteins with L = 4 is close to 0.8. Our results are consistent with the above-average quality of burial predictions used in previous simulations and indicate that the fraction of approachable proteins could increase significantly with even a mild, plausible, improvement on sequence-dependent burial prediction or on sequence-independent constraints that augment the detectable redundancy during simulations. © 2016 Wiley Periodicals, Inc.

UAV-imaging to model growth response of marram grass to sand burial: Implications for coastal dune development

NASA Astrophysics Data System (ADS)

Nolet, Corjan; van Puijenbroek, Marinka; Suomalainen, Juha; Limpens, Juul; Riksen, Michel

2018-04-01

Vegetated coastal dunes have the capacity to keep up with sea-level rise by accumulating and stabilizing wind-blown sand. In Europe, this is attributed to marram grass (Ammophila arenaria), a coastal grass species that combines two unique advantages for dune-building: (1) a very high tolerance to burial by wind-blown sand, and (2) more vigorous growth due to positive feedback to sand burial. However, while these vegetation characteristics have been demonstrated, observational data has not been used to model a function to describe the growth response of Ammophila to sand burial. Studies that model coastal dune development by incorporating positive feedback, as a result, may be hampered by growth functions that are unvalidated against field data. Therefore, this study aims to parameterize an empirical relationship to model the growth response of Ammophila to burial by wind-blown sand. A coastal foredune along a nourished beach in the Netherlands was monitored from April 2015 to April 2016. High-resolution geospatial data was acquired using an Unmanned Aerial Vehicle (UAV). Growth response of Ammophila, expressed by changes in Normalized Difference Vegetation Index (Δ NDVI) and vegetation cover (Δ Cover), is related to a sand burial gradient by fitting a Gaussian function using nonlinear quantile regression. The regression curves indicate an optimal burial rate for Ammophila of 0.31 m of sand per growing season, and suggest (by extrapolation of the data) a maximum burial tolerance for Ammophila between 0.78 (for Δ Cover) and 0.96 m (for Δ NDVI) of sand per growing season. These findings are advantageous to coastal management: maximizing the potential of Ammophila to develop dunes maximizes the potential of coastal dunes to provide coastal safety.

McDonaldization, Islamic teachings, and funerary practices in Kuwait.

PubMed

Iqbal, Zafar

2011-01-01

Drawing on George Ritzer's sociological concept of McDonaldization, this article explores the transformation of burial practices in Kuwait. It is argued that traditional, religious, and private ways of dealing with death have been modernized using the fast-food model of McDonald's. This article examines Islamic teachings on burial and how that model has been applied to the traditional Muslim funerary services, including cemetery management, grave excavation, funeral prayers, burial, and condolences, to make them more efficient vis-a-vis more profitable. Based on personal observations and random interviews, the study finds that the state bureaucracy in Kuwait has made burial rituals more efficient, standardized, calculable, and controlled. Furthermore, several associated irrationalities are also considered. Findings suggest that some individuals may not be happy with these changes but there is no popular resistance to McDonaldization of the burial practices, probably due to the authoritarian and welfare nature of the State of Kuwait.

No place, new places: death and its rituals in urban Asia.

PubMed

Kong, Lily

2012-01-01

In many land-scarce Asian cities, planning agencies have sought to reduce space for the dead to release land for the living, encouraging conversion from burial to cremation over several decades. This has caused secular principles privileging efficient land use to conflict with symbolic values invested in burial spaces. Over time, not only has cremation become more accepted, even columbaria have become overcrowded, and new forms of burials (sea and woodland burials) have emerged. As burial methods change, so too do commemorative rituals, including new on-line and mobile phone rituals. This paper traces the ways in which physical spaces for the dead in several east Asian cities have diminished and changed over time, the growth of virtual space for them, the accompanying discourses that influence these dynamics and the new rituals that emerge concomitantly with the contraction of land space.

Modified human crania from Göbekli Tepe provide evidence for a new form of Neolithic skull cult

PubMed Central

Gresky, Julia; Haelm, Juliane; Clare, Lee

2017-01-01

Archaeological excavations at Göbekli Tepe, a transitional Neolithic site in southeast Turkey, have revealed the earliest megalithic ritual architecture with characteristic T-shaped pillars. Although human burials are still absent from the site, a number of fragmented human bones have been recovered from fill deposits of buildings and from adjacent areas. We focus on three partially preserved human skulls, all of which carry artificial modifications of a type so far unknown from contemporaneous sites and the ethnographic record. As such, modified skull fragments from Göbekli Tepe could indicate a new, previously undocumented variation of skull cult in the Early Neolithic of Anatolia and the Levant. PMID:28782013

Child and Ancient Man: How to Define Their Commonalities and Differences.

PubMed

Oesterdiekhoff, Georg W

2016-09-01

Developmental psychology is not only a psychology of development from childhood to old age but a psychology of human development in world history. Eighty years of cross-cultural empirical research findings indicate that the adolescent stage of formal operations evolved late in history and is not a universal development of adult humans across cultures and history. Correspondingly, preoperational or concrete operational stages describe adult psychological stages in past or premodern cultures, as Jean Piaget and some of his followers have mentioned. Developmental psychology is likewise a historical or anthropological psychology capable of describing humans in premodern cultures. The article develops a general anthropological or psychological theory answering the many questions that arise from the correspondences between (modern) children and ancient adults. On this psychological basis, the new structural genetic theory program is capable of explaining, better than previous approaches, the history of humankind from prehistory through ancient to modern societies, the history of economy, society, culture, religion, philosophy, sciences, morals, and everyday life. The accomplishment of this task was once demanded of some classical founders of psychology, sociology, history, and ethnology but was largely avoided by the postwar generations of authors for political and ideological reasons.

Ethnochemistry and Ethnomedicine of Ancient Papua New Guineans and Their Use in Motivating Students in Secondary Schools and Universities in PNG

ERIC Educational Resources Information Center

Marasinghe, Basil

2016-01-01

For more than 50,000 years of Papua New Guinea's human history, Papua New Guineans have been making significant contributions to Science, particularly in the fields of Chemistry and Medicine. However, because of the absence of any written language for over 800 dialects, the information has not been recorded and the contributions of ancient Papua…

Indien Personhood III: Water Burial

ERIC Educational Resources Information Center

Miller, Jay

2005-01-01

Water burial is a way to return a body to its key primal element. It revives and transforms both the soul and the person. Sometimes water burial leads to a new life floating in a womb. Sometimes it disperses to provide a moist and nutrient-rich medium for a vast variety of other lives, making a contribution to the much larger whole. In this…

Cleanup Verification Package for the 118-C-1, 105-C Solid Waste Burial Ground

DOE Office of Scientific and Technical Information (OSTI.GOV)

M. J. Appel and J. M. Capron

2007-07-25

This cleanup verification package documents completion of remedial action for the 118-C-1, 105-C Solid Waste Burial Ground. This waste site was the primary burial ground for general wastes from the operation of the 105-C Reactor and received process tubes, aluminum fuel spacers, control rods, reactor hardware, spent nuclear fuel and soft wastes.

Hydrology of the solid waste burial ground as related to potential migration of radionuclides, Idaho National Engineering Laboratory

USGS Publications Warehouse

Barraclough, Jack T.; Robertson, J.B.; Janzer, V.J.; Saindon, L.G.

1976-01-01

A study was made (1970-1974) to evaluate the geohydrologic and geochemical controls on subsurface migration of radionuclides from pits and trenches in the Idaho National Engineering Laboratory (INEL) solid waste burial ground and to determine the existence and extent of radionuclide migration from the burial ground. A total of about 1,700 sediment, rock, and water samples were collected from 10 observation wells drilled in and near the burial ground of Idaho National Engineering Laboratory, formerly the National Reactor Testing Station (NRTS). Within the burial ground area, the subsurface rocks are composed principally of basalt. Wind- and water-deposited sediments occur at the surface and in beds between the thicker basalt zones. Two principal sediment beds occur at about 110 feet and 240 feet below the land surface. The average thickness of the surficial sedimentary layer is about 15 feet while that of the two principal subsurface layers is 13 and 14 feet, respectively. The water table in the aquifer beneath the burial ground is at a depth of about 580 feet. Fission, activation, and transuranic elements were detected in some of the samples from the 110- and 240-foot sedimentary layers. (Woodard-USGS)

Munition Burial by Local Scour and Sandwaves: large-scale laboratory experiments

NASA Astrophysics Data System (ADS)

Garcia, M. H.

2017-12-01

Our effort has been the direct observation and monitoring of the burial process of munitions induced by the combined action of waves, currents and pure oscillatory flows. The experimental conditions have made it possible to observe the burial process due to both local scour around model munitions as well as the passage of sandwaves. One experimental facility is the Large Oscillating Water Sediment Tunnel (LOWST) constructed with DURIP support. LOWST can reproduce field-like conditions near the sea bed. The second facility is a multipurpose wave-current flume which is 4 feet (1.20 m) deep, 6 feet (1.8 m) wide, and 161 feet (49.2 m) long. More than two hundred experiments were carried out in the wave-current flume. The main task completed within this effort has been the characterization of the burial process induced by local scour as well in the presence of dynamic sandwaves with superimposed ripples. It is found that the burial of a finite-length model munition (cylinder) is determined by local scour around the cylinder and by a more global process associated with the formation and evolution of sandwaves having superimposed ripples on them. Depending on the ratio of the amplitude of these features and the body's diameter (D), a model munition can progressively get partially or totally buried as such bedforms migrate. Analysis of the experimental data indicates that existing semi-empirical formulae for prediction of equilibrium-burial-depth, geometry of the scour hole around a cylinder, and time-scales developed for pipelines are not suitable for the case of a cylinder of finite length. Relative burial depth (Bd / D) is found to be mainly a function of two parameters. One is the Keulegan-Carpenter number, KC, and the Shields parameter, θ. Munition burial under either waves or combined flow, is influenced by two different processes. One is related to the local scour around the object, which takes place within the first few hundred minutes of flow action (i.e. short time scale). 2nd process is related to the development of sandwaves which in turn may partially or totally cover a given mine as they migrate (i.e. long time scales), leading to global burial. A third process occurring at a much shorter time scale is related to fluidization. Existing formulations for munition burial do not account for long sandwaves as well as bed fluidization.

Inferences of Recent and Ancient Human Population History Using Genetic and Non-Genetic Data

ERIC Educational Resources Information Center

Kitchen, Andrew

2008-01-01

I have adopted complementary approaches to inferring human demographic history utilizing human and non-human genetic data as well as cultural data. These complementary approaches form an interdisciplinary perspective that allows one to make inferences of human history at varying timescales, from the events that occurred tens of thousands of years…

Ancient, Renaissance, and Modern: The Human in the Humanities.

ERIC Educational Resources Information Center

Kallendorf, Craig

1987-01-01

Highlights major points concerning the scope and purpose of the humanities from five educational treatises from the Italian Renaissance. Compares them with Allan Bloom's and E. D. Hirsch, Jr.'s, ideas and revisionist approaches to literature studies. Concludes that the right and left perceive the humanities as a means to political power. (DMM)

Dog Breed Differences in Visual Communication with Humans.

PubMed

Konno, Akitsugu; Romero, Teresa; Inoue-Murayama, Miho; Saito, Atsuko; Hasegawa, Toshikazu

2016-01-01

Domestic dogs (Canis familiaris) have developed a close relationship with humans through the process of domestication. In human-dog interactions, eye contact is a key element of relationship initiation and maintenance. Previous studies have suggested that canine ability to produce human-directed communicative signals is influenced by domestication history, from wolves to dogs, as well as by recent breed selection for particular working purposes. To test the genetic basis for such abilities in purebred dogs, we examined gazing behavior towards humans using two types of behavioral experiments: the 'visual contact task' and the 'unsolvable task'. A total of 125 dogs participated in the study. Based on the genetic relatedness among breeds subjects were classified into five breed groups: Ancient, Herding, Hunting, Retriever-Mastiff and Working). We found that it took longer time for Ancient breeds to make an eye-contact with humans, and that they gazed at humans for shorter periods of time than any other breed group in the unsolvable situation. Our findings suggest that spontaneous gaze behavior towards humans is associated with genetic similarity to wolves rather than with recent selective pressure to create particular working breeds.

Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX.

PubMed

Hanghøj, Kristian; Seguin-Orlando, Andaine; Schubert, Mikkel; Madsen, Tobias; Pedersen, Jakob Skou; Willerslev, Eske; Orlando, Ludovic

2016-12-01

The first epigenomes from archaic hominins (AH) and ancient anatomically modern humans (AMH) have recently been characterized, based, however, on a limited number of samples. The extent to which ancient genome-wide epigenetic landscapes can be reconstructed thus remains contentious. Here, we present epiPALEOMIX, an open-source and user-friendly pipeline that exploits post-mortem DNA degradation patterns to reconstruct ancient methylomes and nucleosome maps from shotgun and/or capture-enrichment data. Applying epiPALEOMIX to the sequence data underlying 35 ancient genomes including AMH, AH, equids and aurochs, we investigate the temporal, geographical and preservation range of ancient epigenetic signatures. We first assess the quality of inferred ancient epigenetic signatures within well-characterized genomic regions. We find that tissue-specific methylation signatures can be obtained across a wider range of DNA preparation types than previously thought, including when no particular experimental procedures have been used to remove deaminated cytosines prior to sequencing. We identify a large subset of samples for which DNA associated with nucleosomes is protected from post-mortem degradation, and nucleosome positioning patterns can be reconstructed. Finally, we describe parameters and conditions such as DNA damage levels and sequencing depth that limit the preservation of epigenetic signatures in ancient samples. When such conditions are met, we propose that epigenetic profiles of CTCF binding regions can be used to help data authentication. Our work, including epiPALEOMIX, opens for further investigations of ancient epigenomes through time especially aimed at tracking possible epigenetic changes during major evolutionary, environmental, socioeconomic, and cultural shifts. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

The value of trophic interactions for ecosystem function: dung beetle communities influence seed burial and seedling recruitment in tropical forests

PubMed Central

Bardgett, Richard D.; Louzada, Julio; Barlow, Jos

2016-01-01

Anthropogenic activities are causing species extinctions, raising concerns about the consequences of changing biological communities for ecosystem functioning. To address this, we investigated how dung beetle communities influence seed burial and seedling recruitment in the Brazilian Amazon. First, we conducted a burial and retrieval experiment using seed mimics. We found that dung beetle biomass had a stronger positive effect on the burial of large than small beads, suggesting that anthropogenic reductions in large-bodied beetles will have the greatest effect on the secondary dispersal of large-seeded plant species. Second, we established mesocosm experiments in which dung beetle communities buried Myrciaria dubia seeds to examine plant emergence and survival. Contrary to expectations, we found that beetle diversity and biomass negatively influenced seedling emergence, but positively affected the survival of seedlings that emerged. Finally, we conducted germination trials to establish the optimum burial depth of experimental seeds, revealing a negative relationship between burial depth and seedling emergence success. Our results provide novel evidence that seed burial by dung beetles may be detrimental for the emergence of some seed species. However, we also detected positive impacts of beetle activity on seedling recruitment, which are probably because of their influence on soil properties. Overall, this study provides new evidence that anthropogenic impacts on dung beetle communities could influence the structure of tropical forests; in particular, their capacity to regenerate and continue to provide valuable functions and services. PMID:27928036

The value of trophic interactions for ecosystem function: dung beetle communities influence seed burial and seedling recruitment in tropical forests.

PubMed

Griffiths, Hannah M; Bardgett, Richard D; Louzada, Julio; Barlow, Jos

2016-12-14

Anthropogenic activities are causing species extinctions, raising concerns about the consequences of changing biological communities for ecosystem functioning. To address this, we investigated how dung beetle communities influence seed burial and seedling recruitment in the Brazilian Amazon. First, we conducted a burial and retrieval experiment using seed mimics. We found that dung beetle biomass had a stronger positive effect on the burial of large than small beads, suggesting that anthropogenic reductions in large-bodied beetles will have the greatest effect on the secondary dispersal of large-seeded plant species. Second, we established mesocosm experiments in which dung beetle communities buried Myrciaria dubia seeds to examine plant emergence and survival. Contrary to expectations, we found that beetle diversity and biomass negatively influenced seedling emergence, but positively affected the survival of seedlings that emerged. Finally, we conducted germination trials to establish the optimum burial depth of experimental seeds, revealing a negative relationship between burial depth and seedling emergence success. Our results provide novel evidence that seed burial by dung beetles may be detrimental for the emergence of some seed species. However, we also detected positive impacts of beetle activity on seedling recruitment, which are probably because of their influence on soil properties. Overall, this study provides new evidence that anthropogenic impacts on dung beetle communities could influence the structure of tropical forests; in particular, their capacity to regenerate and continue to provide valuable functions and services. © 2016 The Author(s).

[The history of medicine in the ancient time].

PubMed

Tesarová, Drahomíra

2012-01-01

This article deals with the history of medicine in the ancient Greece; from the cult of the God Asklepios, to the founder of the scientific rational medicine, Hippokrates. The humoral theory of Hippokrates is explained (the human body consists from four liquids) and his ideal of a physician's approach to a patient is emphasized. In the Hellenistic period the medical development continued in the Alexandria Medical School (Herofilos and Erasistratos). At first, not much attention was given to medicine and scientific health prevention in ancient Rome. Only 293 AD have physicians from Greece first been invited to Rome--e.g. Asklepiades. During the reign of C. lulius Caesar, foreigners, who engaged in medical practice, were granted Roman citizenship and thanks to a number of benefits the medical condition in Roman Empire blossomed. Medical clinics (iatreia), infirmaries (valetudinaria) and, under the influence of Christianity, hospitals were established. In the 2nd century AD ancient medicine reached its climax with physician Galenos, who created the entire system of medical science and became the most significant, but also last medical figure of ancient Rome.

Classification and Recognition of Tomb Information in Hyperspectral Image

NASA Astrophysics Data System (ADS)

Gu, M.; Lyu, S.; Hou, M.; Ma, S.; Gao, Z.; Bai, S.; Zhou, P.

2018-04-01

There are a large number of materials with important historical information in ancient tombs. However, in many cases, these substances could become obscure and indistinguishable by human naked eye or true colour camera. In order to classify and identify materials in ancient tomb effectively, this paper applied hyperspectral imaging technology to archaeological research of ancient tomb in Shanxi province. Firstly, the feature bands including the main information at the bottom of the ancient tomb are selected by the Principal Component Analysis (PCA) transformation to realize the data dimension. Then, the image classification was performed using Support Vector Machine (SVM) based on feature bands. Finally, the material at the bottom of ancient tomb is identified by spectral analysis and spectral matching. The results show that SVM based on feature bands can not only ensure the classification accuracy, but also shorten the data processing time and improve the classification efficiency. In the material identification, it is found that the same matter identified in the visible light is actually two different substances. This research result provides a new reference and research idea for archaeological work.

Extended Survival of Several Microorganisms and Relevant Amino Acid Biomarkers under Simulated Martian Surface Conditions as a Function of Burial Depth

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Adam; Pratt, L.M.; Vishnivetskaya, Tatiana A

2011-01-01

Recent orbital and landed missions have provided substantial evidence for ancient liquid water on the martian surface as well as evidence of more recent sedimentary deposits formed by water and/or ice. These observations raise serious questions regarding an independent origin and evolution of life on Mars. Future missions seek to identify signs of extinct martian biota in the form of biomarkers or morphological characteristics, but the inherent danger of spacecraft-borne terrestrial life makes the possibility of forward contamination a serious threat not only to the life detection experiments, but also to any extant martian ecosystem. A variety of cold andmore » desiccation-tolerant organisms were exposed to 40 days of simulated martian surface conditions while embedded within several centimeters of regolith simulant in order to ascertain the plausibility of such organisms survival as a function of environmental parameters and burial depth. Relevant amino acid biomarkers associated with terrestrial life were also analyzed in order to understand the feasibility of detecting chemical evidence for previous biological activity. Results indicate that stresses due to desiccation and oxidation were the primary deterrent to organism survival, and that the effects of UV-associated damage, diurnal temperature variations, and reactive atmospheric species were minimal. Organisms with resistance to desiccation and radiation environments showed increased levels of survival after the experiment compared to organisms characterized as psychrotolerant. Amino acid analysis indicated the presence of an oxidation mechanism that migrated downward through the samples during the course of the experiment and likely represents the formation of various oxidizing species at mineral surfaces as water vapor diffused through the regolith. Current sterilization protocols may specifically select for organisms best adapted to survival at the martian surface, namely species that show tolerance to radical-induced oxidative damage and low water activity environments. Additionally, any hypothetical martian ecosystems may have evolved similar physiological traits that allow sporadic metabolism during periods of increased water activity.« less

The Development of Molybdenum Speciation as a Paleoredox Tool

NASA Astrophysics Data System (ADS)

Rodley, J.; Peacock, C.; Mosselmans, J. F. W.; Poulton, S.

2017-12-01

The redox state of the oceans has changed throughout geological time and an understanding of these changes is essential to elucidate links between ocean chemistry, climate and life. Due to its abundance in seawater and redox-sensitive nature, molybdenum has enormous potential as a paleoredox proxy. Although a significant amount of research has been done on molybdenum in ancient and modern sediments in terms of its concentrations and isotopic ratios there remains a limited understanding of the drawdown mechanisms of molybdenum under different redox conditions restricting its use in identifying a range of redox states. In order to address these uncertainties, we have developed a novel sequential extraction technique to examine molybdenum concentrations in six sediment fractions from modern samples that represent oxic, nitrogenous, ferruginous and euxinic environments. In addition we use µ-XRF and µ-XANES synchrotron spectroscopy to examine the molybdenum speciation within these fractions and environments. To interpret our µ-XANES data we have developed an extensive library of molybdenum XANES standards that represent molybdenum sequestration by the sediment fractions identified from the sequential extraction. To further verify our synchrotron results we developed a series of µ-XANES micro-column experiments to examine preferential uptake pathways of molybdenum to different sediment phases under a euxinic water column. The initial data from both the sequential extraction and µ-XANES methods indicate that molybdenum is not limited to a single burial pathway in any of the redox environments. We find that each of the redox environments can be characterised by a limited set of molybdenum phase associations, with molybdenum adsorption to pyrite likely the dominant burial pathway. These findings agree with existing research for molybdenum speciation in euxinic environments suggesting that both pyrite and sulphidised organic matter act as important molybdenum sinks. Our new research shows that pyrite is also an important sink for molybdenum in other redox environments.

133. ARAII SL1 burial ground. Shows gravel path from ARAII ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

133. ARA-II SL-1 burial ground. Shows gravel path from ARA-II compound to the burial ground, detail of security fence and entry gate, and sign "Danger radiation hazard." F. C. Torkelson Company 842-area-101-1. Date: October 1961. Ineel index code no. 059-0101-00-851-150723. - Idaho National Engineering Laboratory, Army Reactors Experimental Area, Scoville, Butte County, ID

Using ancient DNA to study the origins and dispersal of ancestral Polynesian chickens across the Pacific

PubMed Central

Thomson, Vicki A.; Lebrasseur, Ophélie; Austin, Jeremy J.; Hunt, Terry L.; Burney, David A.; Denham, Tim; Rawlence, Nicolas J.; Wood, Jamie R.; Gongora, Jaime; Girdland Flink, Linus; Linderholm, Anna; Dobney, Keith; Larson, Greger; Cooper, Alan

2014-01-01

The human colonization of Remote Oceania remains one of the great feats of exploration in history, proceeding east from Asia across the vast expanse of the Pacific Ocean. Human commensal and domesticated species were widely transported as part of this diaspora, possibly as far as South America. We sequenced mitochondrial control region DNA from 122 modern and 22 ancient chicken specimens from Polynesia and Island Southeast Asia and used these together with Bayesian modeling methods to examine the human dispersal of chickens across this area. We show that specific techniques are essential to remove contaminating modern DNA from experiments, which appear to have impacted previous studies of Pacific chickens. In contrast to previous reports, we find that all ancient specimens and a high proportion of the modern chickens possess a group of unique, closely related haplotypes found only in the Pacific. This group of haplotypes appears to represent the authentic founding mitochondrial DNA chicken lineages transported across the Pacific, and allows the early dispersal of chickens across Micronesia and Polynesia to be modeled. Importantly, chickens carrying this genetic signature persist on several Pacific islands at high frequencies, suggesting that the original Polynesian chicken lineages may still survive. No early South American chicken samples have been detected with the diagnostic Polynesian mtDNA haplotypes, arguing against reports that chickens provide evidence of Polynesian contact with pre-European South America. Two modern specimens from the Philippines carry haplotypes similar to the ancient Pacific samples, providing clues about a potential homeland for the Polynesian chicken. PMID:24639505

Colonization of the Scottish islands via long-distance Neolithic transport of red deer (Cervus elaphus).

PubMed

Stanton, David W G; Mulville, Jacqueline A; Bruford, Michael W

2016-04-13

Red deer (Cervus elaphus) have played a key role in human societies throughout history, with important cultural significance and as a source of food and materials. This relationship can be traced back to the earliest human cultures and continues to the present day. Humans are thought to be responsible for the movement of a considerable number of deer throughout history, although the majority of these movements are poorly described or understood. Studying such translocations allows us to better understand ancient human-wildlife interactions, and in the case of island colonizations, informs us about ancient human maritime practices. This study uses DNA sequences to characterise red deer genetic diversity across the Scottish islands (Inner and Outer Hebrides and Orkney) and mainland using ancient deer samples, and attempts to infer historical colonization events. We show that deer from the Outer Hebrides and Orkney are unlikely to have originated from mainland Scotland, implying that humans introduced red deer from a greater distance. Our results are also inconsistent with an origin from Ireland or Norway, suggesting long-distance maritime travel by Neolithic people to the outer Scottish Isles from an unknown source. Common haplotypes and low genetic differentiation between the Outer Hebrides and Orkney imply common ancestry and/or gene flow across these islands. Close genetic proximity between the Inner Hebrides and Ireland, however, corroborates previous studies identifying mainland Britain as a source for red deer introductions into Ireland. This study provides important information on the processes that led to the current distribution of the largest surviving indigenous land mammal in the British Isles. © 2016 The Authors.

The Mobile Element Locator Tool (MELT): population-scale mobile element discovery and biology

PubMed Central

Gardner, Eugene J.; Lam, Vincent K.; Harris, Daniel N.; Chuang, Nelson T.; Scott, Emma C.; Pittard, W. Stephen; Mills, Ryan E.; Devine, Scott E.

2017-01-01

Mobile element insertions (MEIs) represent ∼25% of all structural variants in human genomes. Moreover, when they disrupt genes, MEIs can influence human traits and diseases. Therefore, MEIs should be fully discovered along with other forms of genetic variation in whole genome sequencing (WGS) projects involving population genetics, human diseases, and clinical genomics. Here, we describe the Mobile Element Locator Tool (MELT), which was developed as part of the 1000 Genomes Project to perform MEI discovery on a population scale. Using both Illumina WGS data and simulations, we demonstrate that MELT outperforms existing MEI discovery tools in terms of speed, scalability, specificity, and sensitivity, while also detecting a broader spectrum of MEI-associated features. Several run modes were developed to perform MEI discovery on local and cloud systems. In addition to using MELT to discover MEIs in modern humans as part of the 1000 Genomes Project, we also used it to discover MEIs in chimpanzees and ancient (Neanderthal and Denisovan) hominids. We detected diverse patterns of MEI stratification across these populations that likely were caused by (1) diverse rates of MEI production from source elements, (2) diverse patterns of MEI inheritance, and (3) the introgression of ancient MEIs into modern human genomes. Overall, our study provides the most comprehensive map of MEIs to date spanning chimpanzees, ancient hominids, and modern humans and reveals new aspects of MEI biology in these lineages. We also demonstrate that MELT is a robust platform for MEI discovery and analysis in a variety of experimental settings. PMID:28855259

Complexities of nitrogen isotope biogeochemistry in plant-soil systems: implications for the study of ancient agricultural and animal management practices

PubMed Central

Szpak, Paul

2014-01-01

Nitrogen isotopic studies have the potential to shed light on the structure of ancient ecosystems, agropastoral regimes, and human-environment interactions. Until relatively recently, however, little attention was paid to the complexities of nitrogen transformations in ancient plant-soil systems and their potential impact on plant and animal tissue nitrogen isotopic compositions. This paper discusses the importance of understanding nitrogen dynamics in ancient contexts, and highlights several key areas of archaeology where a more detailed understanding of these processes may enable us to answer some fundamental questions. This paper explores two larger themes that are prominent in archaeological studies using stable nitrogen isotope analysis: (1) agricultural practices (use of animal fertilizers, burning of vegetation or shifting cultivation, and tillage) and (2) animal domestication and husbandry (grazing intensity/stocking rate and the foddering of domestic animals with cultigens). The paucity of plant material in ancient deposits necessitates that these issues are addressed primarily through the isotopic analysis of skeletal material rather than the plants themselves, but the interpretation of these data hinges on a thorough understanding of the underlying biogeochemical processes in plant-soil systems. Building on studies conducted in modern ecosystems and under controlled conditions, these processes are reviewed, and their relevance discussed for ancient contexts. PMID:25002865

Modern tree species composition reflects ancient Maya "forest gardens" in northwest Belize.

PubMed

Ross, Nanci J

2011-01-01

Ecology and ethnobotany were integrated to assess the impact of ancient Maya tree-dominated home gardens (i.e., "forest gardens"), which contained a diversity of tree species used for daily household needs, on the modern tree species composition of a Mesoamerican forest. Researchers have argued that the ubiquity of these ancient gardens throughout Mesoamerica led to the dominance of species useful to Maya in the contemporary forest, but this pattern may be localized depending on ancient land use. The tested hypothesis was that species composition would be significantly different between areas of dense ancient residential structures (high density) and areas of little or no ancient settlement (low density). Sixty-three 400-m2 plots (31 high density and 32 low density) were censused around the El Pilar Archaeological Reserve in northwestern Belize. Species composition was significantly different, with higher abundances of commonly utilized "forest garden" species still persisting in high-density forest areas despite centuries of abandonment. Subsequent edaphic analyses only explained 5% of the species composition differences. This research provides data on the long-term impacts of Maya forests gardens for use in development of future conservation models. For Mesoamerican conservation programs to work, we must understand the complex ecological and social interactions within an ecosystem that developed in intimate association with humans.

Health benefits of ancient grains. Comparison among bread made with ancient, heritage and modern grain flours in human cultured cells.

PubMed

Valli, Veronica; Taccari, Annalisa; Di Nunzio, Mattia; Danesi, Francesca; Bordoni, Alessandra

2018-05-01

Nowadays the higher nutritional value of whole grains compared to refined grains is recognized. In the last decade, there has been a renewed interest in the ancient wheat varieties for producing high-value food products with enhanced health benefits. This study compared two ancient grains, two heritage grains, and four modern grains grown in the same agronomic conditions considering not only their chemical characteristics, but also their biological effects. Whole grain flours were obtained and used to make bread. Bread was in vitro digested, the digesta were supplemented to HepG2 cells, and the biological effects of supplementation were evaluated. In addition, cells previously supplemented with the different digested bread types were then exposed to inflammatory agents to evidence possible protective effects of the pre-treatments. Despite the impossibility to discriminate bread made with different grains based on their chemical composition, results herein reported evidence that their supplementation to cultured cells exerts different effects, confirming the potential health benefits of ancient grains. This research represents an advancement for the evaluation of the apparent positive effects of ancient grains and the formulation of cereal-based products with added nutritional value. Copyright © 2018 Elsevier Ltd. All rights reserved.

Sulfate burial constraints on the Phanerozoic sulfur cycle.

PubMed

Halevy, Itay; Peters, Shanan E; Fischer, Woodward W

2012-07-20

The sulfur cycle influences the respiration of sedimentary organic matter, the oxidation state of the atmosphere and oceans, and the composition of seawater. However, the factors governing the major sulfur fluxes between seawater and sedimentary reservoirs remain incompletely understood. Using macrostratigraphic data, we quantified sulfate evaporite burial fluxes through Phanerozoic time. Approximately half of the modern riverine sulfate flux comes from weathering of recently deposited evaporites. Rates of sulfate burial are unsteady and linked to changes in the area of marine environments suitable for evaporite formation and preservation. By contrast, rates of pyrite burial and weathering are higher, less variable, and largely balanced, highlighting a greater role of the sulfur cycle in regulating atmospheric oxygen.

Portraits of Human Greatness.

ERIC Educational Resources Information Center

Saint Anselm's Coll., Manchester, NH.

Examined is the Humanities Program at St. Anselm College, a two-year program of readings and lectures ordered chronologically from ancient to contemporary times--from the age of Classical Greek thought and the Old Testament to the twentieth century. The first year of the Humanities Program is organized in eight units on general modes of…

Discovering Hidden Analogies in an Online Humanities Database.

ERIC Educational Resources Information Center

Cory, Kenneth A.

1999-01-01

Drawing upon an efficacious method for discovering previously unknown causes of medical syndromes and searching in the Humanities Index, an illuminating new humanities analogy between the epistemological ideas of Robert Frost and the ancient Greek philosopher Carneades was found by constructing a search statement in which proper names were coupled…

Animal Management at the Ancient Metropolis of Teotihuacan, Mexico: Stable Isotope Analysis of Leporid (Cottontail and Jackrabbit) Bone Mineral.

PubMed

Somerville, Andrew D; Sugiyama, Nawa; Manzanilla, Linda R; Schoeninger, Margaret J

2016-01-01

Human-animal interactions have played crucial roles in the development of complex societies across the globe. This study examines the human-leporid (cottontail and jackrabbit) relationship at the pre-Hispanic (AD 1-550) city of Teotihuacan in the Basin of Mexico and tests the hypothesis that leporids were managed or bred for food and secondary products within the urban core. We use stable isotope analysis (δ13Capatite and δ18Oapatite) of 134 leporid specimens from five archaeological contexts within the city and 13 modern specimens from across central Mexico to quantify aspects of leporid diet and ecology. The results demonstrate that leporids from Oztoyahualco, a residential complex associated with a unique rabbit sculpture and archaeological traces of animal butchering, exhibit the highest δ13Capatite values of the sample. These results imply greater consumption of human-cultivated foods, such as maize (Zea mays), by cottontails and jackrabbits at this complex and suggest practices of human provisioning. A lack of significant differences in δ18Oapatite values between ancient and modern leporids and between Oztoyahualco and other locations within Teotihuacan indicates generally similar relative humidity from sampled contexts. Results of this study support the notion that residents provisioned, managed, or bred leporids during the height of the city, and provide new evidence for mammalian animal husbandry in the ancient New World.

Animal Management at the Ancient Metropolis of Teotihuacan, Mexico: Stable Isotope Analysis of Leporid (Cottontail and Jackrabbit) Bone Mineral

PubMed Central

Somerville, Andrew D.; Sugiyama, Nawa; Manzanilla, Linda R.; Schoeninger, Margaret J.

2016-01-01

Human-animal interactions have played crucial roles in the development of complex societies across the globe. This study examines the human-leporid (cottontail and jackrabbit) relationship at the pre-Hispanic (AD 1–550) city of Teotihuacan in the Basin of Mexico and tests the hypothesis that leporids were managed or bred for food and secondary products within the urban core. We use stable isotope analysis (δ13Capatite and δ18Oapatite) of 134 leporid specimens from five archaeological contexts within the city and 13 modern specimens from across central Mexico to quantify aspects of leporid diet and ecology. The results demonstrate that leporids from Oztoyahualco, a residential complex associated with a unique rabbit sculpture and archaeological traces of animal butchering, exhibit the highest δ13Capatite values of the sample. These results imply greater consumption of human-cultivated foods, such as maize (Zea mays), by cottontails and jackrabbits at this complex and suggest practices of human provisioning. A lack of significant differences in δ18Oapatite values between ancient and modern leporids and between Oztoyahualco and other locations within Teotihuacan indicates generally similar relative humidity from sampled contexts. Results of this study support the notion that residents provisioned, managed, or bred leporids during the height of the city, and provide new evidence for mammalian animal husbandry in the ancient New World. PMID:27532515

Planet Earth, Humans, Gravity and Their Connection to Natural Medicine-Essence from a 5000 Yrs Old Ancient Pedagogy

NASA Astrophysics Data System (ADS)

Lakshmanan, S.; Monsanto, C.; Radjendirane, B.

2015-12-01

According to the Ancient Indian Science, the fundamental constituents of planet earth are the five elements (Solid, Liquid, Heat, Air and Akash (subtlest energy field)). The same five elements constitute the human body. The Chinese and many other native traditions have used their deep understanding of these elements to live in balance with the planet. David Suzuki has elaborated on this key issue in his classic book, The Legacy: "Today we are in a state of crisis, and we must join together to respond to that crisis. If we do so, Suzuki envisions a future in which we understand that we are the Earth and live accordingly. All it takes is imagination and a determination to live within our, and the planet's, means". Gravity, the common force that connects both the body and earth plays a major role in the metabolism as well as the autonomous function of different organs in the body. Gravity has a direct influence on the fruits and vegetables that are grown on the planet as well. As a result, there is a direct relationship among gravity, food and human health. My talk will cover the missing link between the Earth's Gravity and the human health. A new set of ancient axioms will be used to address this and many other issues that are remain as "major unsolved problems" linking modern Geophysical and Health sciences.

Investigating population continuity with ancient DNA under a spatially explicit simulation framework.

PubMed

Silva, Nuno Miguel; Rio, Jeremy; Currat, Mathias

2017-12-15

Recent advances in sequencing technologies have allowed for the retrieval of ancient DNA data (aDNA) from skeletal remains, providing direct genetic snapshots from diverse periods of human prehistory. Comparing samples taken in the same region but at different times, hereafter called "serial samples", may indicate whether there is continuity in the peopling history of that area or whether an immigration of a genetically different population has occurred between the two sampling times. However, the exploration of genetic relationships between serial samples generally ignores their geographical locations and the spatiotemporal dynamics of populations. Here, we present a new coalescent-based, spatially explicit modelling approach to investigate population continuity using aDNA, which includes two fundamental elements neglected in previous methods: population structure and migration. The approach also considers the extensive temporal and geographical variance that is commonly found in aDNA population samples. We first showed that our spatially explicit approach is more conservative than the previous (panmictic) approach and should be preferred to test for population continuity, especially when small and isolated populations are considered. We then applied our method to two mitochondrial datasets from Germany and France, both including modern and ancient lineages dating from the early Neolithic. The results clearly reject population continuity for the maternal line over the last 7500 years for the German dataset but not for the French dataset, suggesting regional heterogeneity in post-Neolithic migratory processes. Here, we demonstrate the benefits of using a spatially explicit method when investigating population continuity with aDNA. It constitutes an improvement over panmictic methods by considering the spatiotemporal dynamics of genetic lineages and the precise location of ancient samples. The method can be used to investigate population continuity between any pair of serial samples (ancient-ancient or ancient-modern) and to investigate more complex evolutionary scenarios. Although we based our study on mitochondrial DNA sequences, diploid molecular markers of different types (DNA, SNP, STR) can also be simulated with our approach. It thus constitutes a promising tool for the analysis of the numerous aDNA datasets being produced, including genome wide data, in humans but also in many other species.

Near surface geophysics: application of FD-EMI sounding to the study of historical resources

NASA Astrophysics Data System (ADS)

Manstein, Yu. A.; Manstein, A. K.; Scozzari, A.

2009-04-01

Sounding with alternating electromagnetic fields has gained a growing attention and a broad usage during the last three decades, including Frequency Domain Electromagnetic Induction (FD-EMI) sounding methods. A portable electromagnetic sensor (EMS-NEMFIS), developed at IPGG (Siberian Branch of the Russian Academy of Sciences), which is based on such principle, is described in this work. Among the various application areas of such an instrument, focus in this work is given to the near-surface investigation of historical resources. The description of the device goes through the following steps: - Architecture of the instrument - Signal extraction principle - Tests and characterization Then, experiences made by using frequency-domain EMI soundings for geophysical applications in archaeology are presented, in order to assess the capability of the approach in such operative framework. In particular, case studies from the South Altay mountains and from Siberia have been selected to be shown in this context. The burial mounds of Pazyryk culture, dated 2500-3000 B.C., can be found over the wide area of South Altay mountains in Russia, Mongolia and China. This nomadic civilization belongs to the group of Mediterranean cultures. These people stayed in the Altay mountains for quite a short time - just a couple of centuries. Maybe they escaped from Europe due to Alexander Makedonsky wars or to some other unknown reason, and then went back to Europe. They burial mounds were kept safe because the wooden funeral cameras were buried into permafrost. However, recently, due to global warming, some of those cameras were melt, leading to a decay process. The information about presence of the ice lens inside of the mound is vital for decision to excavate the mound or not. Dozens of such a mounds were explored using NEMFIS during the years 2005 - 2007. Estimation of presence of the ice in some of them helped to find few good conserved burial cameras and safe a lot of resources for archaeologists. Site # 15 of Cicah settlement is located in the Novosibirsk area. Cicah settlement is the large monument of Skyth culture. The general magnetic map of the settlement was made by Dr. Fassbinder and Dr. Becker. Then, many interesting spots were studied by NEMFIS to get more detailed information. Site # 15 was explored prior to excavation. The good correlation between NEMFIS signal distribution and the site inner structure can be seen. The area of Vengerovo town, located about 400 km West of Novosibirsk, was populated by various nomadic civilizations in the period between 3000-1000 B.C. The remains of such a nomadic life can be found all over the western Siberia as mounds, buried settlements, burial and ceremonial objects etc. Almost all of them were robbed in medieval ages and especially in XVIII century by expeditions launched by Peter the Great, Russian Emperor, to enrich his collection of ancient gold. As an example, Pogorelka is one of the typical mound presented at the area. Investigation of selected places in such areas is also discussed in this work.

Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis

PubMed Central

Bos, Kirsten I.; Harkins, Kelly M.; Herbig, Alexander; Coscolla, Mireia; Weber, Nico; Comas, Iñaki; Forrest, Stephen A.; Bryant, Josephine M.; Harris, Simon R.; Schuenemann, Verena J.; Campbell, Tessa J.; Majander, Kerrtu; Wilbur, Alicia K.; Guichon, Ricardo A.; Wolfe Steadman, Dawnie L.; Cook, Della Collins; Niemann, Stefan; Behr, Marcel A.; Zumarraga, Martin; Bastida, Ricardo; Huson, Daniel; Nieselt, Kay; Young, Douglas; Parkhill, Julian; Buikstra, Jane E.; Gagneux, Sebastien; Stone, Anne C.; Krause, Johannes

2015-01-01

Modern strains of Mycobacterium tuberculosis from the Americas are closely related to those from Europe, supporting the assumption that human tuberculosis was introduced post-contact1. This notion, however, is incompatible with archaeological evidence of pre-contact tuberculosis in the New World2. Comparative genomics of modern isolates suggests that M. tuberculosis attained its worldwide distribution following human dispersals out of Africa during the Pleistocene epoch3, although this has yet to be confirmed with ancient calibration points. Here we present three 1,000-year-old mycobacterial genomes from Peruvian human skeletons, revealing that a member of the M. tuberculosis complex caused human disease before contact. The ancient strains are distinct from known human-adapted forms and are most closely related to those adapted to seals and sea lions. Two independent dating approaches suggest a most recent common ancestor for the M. tuberculosis complex less than 6,000 years ago, which supports a Holocene dispersal of the disease. Our results implicate sea mammals as having played a role in transmitting the disease to humans across the ocean. PMID:25141181

Climate change decouples oceanic primary and export productivity and organic carbon burial

PubMed Central

Lopes, Cristina; Kucera, Michal; Mix, Alan C.

2015-01-01

Understanding responses of oceanic primary productivity, carbon export, and burial to climate change is essential for model-based projection of biological feedbacks in a high-CO2 world. Here we compare estimates of productivity based on the composition of fossil diatom floras with organic carbon burial off Oregon in the Northeast Pacific across a large climatic transition at the last glacial termination. Although estimated primary productivity was highest during the Last Glacial Maximum, carbon burial was lowest, reflecting reduced preservation linked to low sedimentation rates. A diatom size index further points to a glacial decrease (and deglacial increase) in the fraction of fixed carbon that was exported, inferred to reflect expansion, and contraction, of subpolar ecosystems that today favor smaller plankton. Thus, in contrast to models that link remineralization of carbon to temperature, in the Northeast Pacific, we find dominant ecosystem and sea floor control such that intervals of warming climate had more efficient carbon export and higher carbon burial despite falling primary productivity. PMID:25453073

Characterization of Bacterial Community Dynamics during the Decomposition of Pig Carcasses in Simulated Soil Burial and Composting Systems.

PubMed

Ki, Bo-Min; Kim, Yu Mi; Jeon, Jun Min; Ryu, Hee Wook; Cho, Kyung-Suk

2017-12-28

Soil burial is the most widely used disposal method for infected pig carcasses, but composting has gained attention as an alternative disposal method because pig carcasses can be decomposed rapidly and safely by composting. To understand the pig carcass decomposition process in soil burial and by composting, pilot-scale test systems that simulated soil burial and composting were designed and constructed in the field. The envelope material samples were collected using special sampling devices without disturbance, and bacterial community dynamics were analyzed by high-throughput pyrosequencing for 340 days. Based on the odor gas intensity profiles, it was estimated that the active and advanced decay stages were reached earlier by composting than by soil burial. The dominant bacterial communities in the soil were aerobic and/or facultatively anaerobic gram-negative bacteria such as Pseudomonas, Gelidibacter, Mucilaginibacter , and Brevundimonas . However, the dominant bacteria in the composting system were anaerobic, thermophilic, endospore-forming, and/or halophilic gram-positive bacteria such as Pelotomaculum, Lentibacillus, Clostridium , and Caldicoprobacter . Different dominant bacteria played important roles in the decomposition of pig carcasses in the soil and compost. This study provides useful comparative date for the degradation of pig carcasses in the soil burial and composting systems.

The characterization and risk assessment of the `Red Forest` radioactive waste burial site at Chernobyl Nuclear Power Plant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bungai, D.A.; Skalskij, A.S.; Dzhepo, S.P.

The `Red Forest` radioactive waste burials created during emergency clean-up activities at Chernobyl Nuclear Power Plant represent a serious source of radioactive contamination of the local ground water system with 9OSr concentration in ground water exceeding the drinking water standard by 3-4 orders of magnitude. In this paper we present results of our hydrogeological and radiological `Red Forest` site characterization studies, which allow us to estimate 9OSr subsurface migration parameters. We use then these parameters to assess long terrain radionuclide transport to groundwater and surface water, and to analyze associated health risks. Our analyses indicate that 9OSr transport via groundmore » water pathway from `Red Forest` burials to the adjacent Pripyat River is relatively insignificant due to slow release of 9OSr from the waste burials (less than 1% of inventory per year) and due to long enough ground water residence time in the subsurface, which allows substantial decay of the radioactive contaminant. Tins result and our previous analyses indicate, that though conditions of radioactive waste storage in burials do not satisfy Ukrainian regulation on radiation protection, health risks caused by radionuclide migration to ground water from `Red Forest` burials do not justify application of expensive countermeasures.« less

Tracking the origins and diet of an endemic island canid (Urocyon littoralis) across 7300 years of human cultural and environmental change

NASA Astrophysics Data System (ADS)

Hofman, Courtney A.; Rick, Torben C.; Maldonado, Jesús E.; Collins, Paul W.; Erlandson, Jon M.; Fleischer, Robert C.; Smith, Chelsea; Sillett, T. Scott; Ralls, Katherine; Teeter, Wendy; Vellanoweth, René L.; Newsome, Seth D.

2016-08-01

Understanding how human activities have influenced the foraging ecology of wildlife is important as our planet faces ongoing and impending habitat and climatic change. We review the canine surrogacy approach (CSA)-a tool for comparing human, dog, and other canid diets in the past-and apply CSA to investigate possible ancient human resource provisioning in an endangered canid, the California Channel Islands fox (Urocyon littoralis). We conducted stable isotope analysis of bone collagen samples from ancient and modern island foxes (n = 214) and mainland gray foxes (Urocyon cinereoargenteus, n = 24). We compare these data to isotope values of ancient humans and dogs, and synthesize 29 Accelerator Mass Spectrometry (AMS) radiocarbon dates that fine-tune the chronology of island foxes. AMS dates confirm that island foxes likely arrived during the early Holocene (>7300 cal BP) on the northern islands in the archipelago and during the middle Holocene (>5500 cal BP) on the southern islands. We found no evidence that island foxes were consistently using anthropogenic resources (e.g., food obtained by scavenging around human habitation sites or direct provisioning by Native Americans), except for a few individuals on San Nicolas Island and possibly on San Clemente and Santa Rosa islands. Decreases in U. littoralis carbon and nitrogen isotope values between prehistoric times and the 19th century on San Nicolas Island suggest that changes in human land use from Native American hunter-gatherer occupations to historical ranching had a strong influence on fox diet. Island foxes exhibit considerable dietary variation through time and between islands and have adapted to a wide variety of climatic and cultural changes over the last 7300 years. This generalist foraging strategy suggests that endemic island foxes may be resilient to future changes in resource availability.

Engineering assessment of low-level liquid waste disposal caisson locations at the 618-11 Burial Grounds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Phillips, S.J.; Fischer, D.D.; Crawford, R.C.

1982-06-01

Rockwell Hanford Operations is currently involved in an extensive effort to perform interim ground surface stabilization activities at retired low-level waste burial grounds located at the Hanford Site, Richland, Washington. The principal objective of these activities is to promote increased occupational and radiological safety at burial grounds. Interim stabilization activities include: (1) load testing (traversing burial ground surfaces with heavy equipment to promote incipient collapse of void spaces within the disposal structure and overburden), (2) barrier placement (placement of a {ge} 0.6 m soil barrier over existing overburden), and (3) revegetation (establishment of shallow rooted vegetation on the barrier tomore » mitigate deep rooted plant growth and to reduce erosion). Low-level waste disposal caissons were used in 300 Area Burial Grounds as internment structures for containerized liquid wastes. These caissons, by virtue of their contents, design and methods of closure, require long-term performance evaluation. As an initial activity to evaluate long-term performance, the accurate location of these structures is required. This topical report summarizes engineering activities used to locate caissons in the subsurface environment at the Burial Ground. Activities were conducted to locate caissons during surface stabilization activities. The surface locations were marked, photographed, and recorded on an as built engineering drawing. The recorded location of these caissons will augment long-term observations of confinement structure and engineered surface barrier performance. In addition, accurate caisson location will minimize occupational risk during monitoring and observation activities periodically conducted at the burial ground.« less

Molecular Exploration of the First-Century Tomb of the Shroud in Akeldama, Jerusalem

PubMed Central

Matheson, Carney D.; Vernon, Kim K.; Lahti, Arlene; Fratpietro, Renee; Spigelman, Mark; Gibson, Shimon; Greenblatt, Charles L.; Donoghue, Helen D.

2009-01-01

The Tomb of the Shroud is a first-century C.E. tomb discovered in Akeldama, Jerusalem, Israel that had been illegally entered and looted. The investigation of this tomb by an interdisciplinary team of researchers began in 2000. More than twenty stone ossuaries for collecting human bones were found, along with textiles from a burial shroud, hair and skeletal remains. The research presented here focuses on genetic analysis of the bioarchaeological remains from the tomb using mitochondrial DNA to examine familial relationships of the individuals within the tomb and molecular screening for the presence of disease. There are three mitochondrial haplotypes shared between a number of the remains analyzed suggesting a possible family tomb. There were two pathogens genetically detected within the collection of osteological samples, these were Mycobacterium tuberculosis and Mycobacterium leprae. The Tomb of the Shroud is one of very few examples of a preserved shrouded human burial and the only example of a plaster sealed loculus with remains genetically confirmed to have belonged to a shrouded male individual that suffered from tuberculosis and leprosy dating to the first-century C.E. This is the earliest case of leprosy with a confirmed date in which M. leprae DNA was detected. PMID:20016819

Stability and instability on Maya Lowlands tropical hillslope soils

NASA Astrophysics Data System (ADS)

Beach, Timothy; Luzzadder-Beach, Sheryl; Cook, Duncan; Krause, Samantha; Doyle, Colin; Eshleman, Sara; Wells, Greta; Dunning, Nicholas; Brennan, Michael L.; Brokaw, Nicholas; Cortes-Rincon, Marisol; Hammond, Gail; Terry, Richard; Trein, Debora; Ward, Sheila

2018-03-01

Substantial lake core and other evidence shows accelerated soil erosion occurred in the Maya Lowlands of Central America over ancient Maya history from 3000 to 1000 years ago. But we have little evidence of the wider network of the sources and sinks of that eroded sediment cascade. This study begins to solve the mystery of missing soil with new research and a synthesis of existing studies of tropical forest soils along slopes in NW Belize. The research aim is to understand soil formation, long-term human impacts on slopes, and slope stability over time, and explore ecological implications. We studied soils on seven slopes in tropical forest areas that have experienced intensive ancient human impacts and those with little ancient impacts. All of our soil catenas, except for one deforested from old growth two years before, contain evidence for about 1000 years of stable, tropical forest cover since Maya abandonment. We characterized the physical, chemical, and taxonomic characteristics of soils at crest-shoulder, backslopes, footslopes, and depression locations, analyzing typical soil parameters, chemical elements, and carbon isotopes (δ13C) in dated and undated sequences. Four footslopes or depressions in areas of high ancient occupation preserved evidence of buried, clay-textured soils covered by coarser sediment dating from the Maya Classic period. Three footslopes from areas with scant evidence of ancient occupation had little discernable deposition. These findings add to a growing corpus of soil toposequences with similar facies changes in footslopes and depressions that date to the Maya period. Using major elemental concentrations across a range of catenas, we derived a measure (Ca + Mg) / (Al + Fe + Mn) of the relative contributions of autochthonous and allochthonous materials and the relative age of soil catenas. We found very low ratios in clearly older, buried soils in footslopes and depressions and on slopes that had not undergone ancient Maya erosion. We found high (Ca + Mg) / (Al + Fe + Mn) values on slopes with several lines of evidence that suggest relative youth, soils possibly formed since Maya abandonment. Carbon isotopes (δ13C) also provide some evidence of past vegetation change on slopes. We found strong evidence for maize or other alien C4 species in an ancient terrace soil and additional evidence in buried footslopes but only evidence for C3 species (like tropical trees) on the backslopes and other crest-shoulders. The fact that steep slopes preserved no evidence of C4 species inputs may mean that the ancient Maya maintained forests here. Alternatively, ancient Maya land uses eroded slopes, with the δ13C signatures detected today being the result of more recent soil development under forest over the last millennium. Additional evidence that these soils are recent in age includes elevated (Ca + Mg) / (Al + Fe + Mn) values, skeletal soil profiles, and low soil magnetic susceptibility. Besides the evidence for truncating backslopes and aggrading footslopes, the ancient Maya built agricultural terraces that accumulated soils and altered drainage. All these ancient Maya slope alterations would have influenced modern tree distributions, because many tree species in the modern forest show strong preferences for different soil types and topographic situations that the ancient Maya changed.

Stabilization of kerogen thermal maturation: Evidence from geothermometry and burial history reconstruction, Niobrara Limestone, Berthoud oil field, western Denver Basin, Colorado

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barker, C.E.; Crysdale, B.L.

1990-05-01

The burial history of this fractured Niobrara Limestone reservoir and source rock offers a setting for studying the stabilization of thermal maturity because soon after peak temperature of approximately 100{degree}C was reached, exhumation lowered temperature to about 60-70{degree}C. Vitrinite reflectance (Rm = 0.6-0.7%) and published clay mineralogy data from the Niobrara Limestone indicate that peak paleotemperature was approximately 100{degree}C. Fluid inclusion data also indicate oil migration occurred at 100{degree}C. Burial history reconstruction indicates 100{degree}C was reached in the Niobrara Limestone only during minimum burial, which occurred at 70 Ma and 8000 ft depth. However, erosion beginning at 70 Ma andmore » continuing until 50 Ma removed over 3,000 ft of rock. This depth of erosion agrees with an Rm of 0.4% measured in surface samples of the Pierre Shale. The exhumation of the reservoir decreased temperature by about 30{degree}C to near the corrected bottom-hole temperature of 50-70{degree}C. Lopatin time-temperature index (TTI) analysis suggests the Niobrara Limestone as a source rock matured to the oil generation stage (TTI = 10) about 25 Ma, significantly later than maximum burial, and after exhumation caused cooling. The Lopatin TTI method in this case seems to overestimate the influence of heating time. If time is an important factor, thermal maturity should continue to increase after peak burial and temperature so that vitrinite reflectance will not be comparable to peak paleotemperatures estimated from geothermometers set at near-peak temperature and those estimated from burial history reconstruction. The agreement between geothermometry and the burial history reconstruction in Berthoud State 4 suggests that the influence of heating time must be small. The elapsed time available at near peak temperatures was sufficient to allow stabilization of thermal maturation in this case.« less

Reduction of Bacterial Pathogenic Risk during Ex-situ Stabilization of Previously Buried Foot-and-Mouth Disease Carcasses in a Pilot-scale Bio-augmented Aerobic Composting

NASA Astrophysics Data System (ADS)

Kim, S.; Park, J.; Park, J. K.; Park, S.; Jeon, H.; Kwon, H.

2017-12-01

Foot and mouth disease outbreaks globally occur. Although livestock suspected to be infected or actually infected by animal infectious diseases is typically treated with various methods including burial, burning, incineration, rendering, and composting, burial into soil is currently the major treatment method in Korea. However, buried carcasses are often found to remain undecomposed or incompletely decomposed even after the legal burial period (3 years). To reuse the land used for the burial purposes, Korea government is considering a novel approach to conduct in-situ burial treatment and then to move remaining carcasses from the burial sites to other sites designated for further ex-situ stabilization treatment (burial-composting sequential treatment). In this work, the feasibility of the novel approach was evaluated at a pilot scale facility. For the ex-situ stabilization, we tested the validity of use of a bio-augmented aerobic composting with carcass-degrading microorganisms, with emphasis on examining if the novel aerobic composting has reducing effects on potential pathogenic bacteria. As results, the decreased chemical oxygen demand (COD, 160,000 mg/kg to 40,000 mg/kg) and inorganic nitrogen species (total nitrogen, 5,000 mg/kg to 2,000 mg/kg) indicated effective bio-stabilization of carcasses. During the stabilization, bacterial community structure and dynamics determined by bacterial 16S rRNA sequencing were significantly changed. The prediction of potential pathogenic bacteria showed that bacterial pathogenic risk was significantly reduced up to a normal soil level during the ex-situ stabilization. The conclusion was confirmed by the following functional analysis of dominant bacteria using PICRUST. The findings support the microbiological safety of the ex-site use of the novel burial-composting sequential treatment. Acknowledgement : This study is supported by Korea Ministry of Environmental as "The GAIA Project"

The Impact of Physical Disturbance and Increased Sand Burial on Clonal Growth and Spatial Colonization of Sporobolus virginicus in a Coastal Dune System

PubMed Central

Balestri, Elena; Lardicci, Claudio

2013-01-01

Dune plants are subjected to disturbance and environmental stresses, but little is known about the possible combined effects of such factors on growth and spatial colonization. We investigated how clones of Sporobolus virginicus , a widespread dune species, responded to the independent and interactive effects of breakage of rhizomes, breakage position and burial regime. Horizontal rhizomes were severed at three different internode positions relative to the apex to span the range of damage by disturbance naturally observed or left intact, and apical portions exposed to two burial scenarios (ambient vs. increased frequency) for three months in the field. The performance of both parts of severed rhizomes, the apical portion and the remaining basal portion connected to clone containing four consecutive ramets, was compared with that of equivalent parts in intact rhizomes. Apical portions severed proximal to the third internode did not survive and their removal did not enhance branching on their respective basal portions. Severing the sixth or twelfth internode did not affect survival and rhizome extension of apical portions, but suppressed ramet production and reduced total biomass and specific shoot length. Their removal enhanced branching and ramet production on basal portions and changed the original rhizome growth trajectory. However, the gain in number of ramets in basal portions never compensated for the reduction in ramet number in apical portions. Recurrent burial increased biomass allocation to root tissues. Burial also stimulated rhizome extension only in intact rhizomes, indicating that disturbance interacts with, and counteracts, the positive burial effect. These results suggest that disturbance and recurrent burial in combination reduces the regeneration success and spread capacity of S . virginucus . Since global change leads to increasingly severe or frequent storms, the impact of disturbance and burial on clones could be greater in future and possibly prevent colonization of mobile dunes by the species. PMID:23977326

Lake eutrophication and its implications for organic carbon sequestration in Europe.

PubMed

Anderson, N J; Bennion, H; Lotter, A F

2014-09-01

The eutrophication of lowland lakes in Europe by excess nitrogen (N) and phosphorus (P) is severe because of the long history of land-cover change and agricultural intensification. The ecological and socio-economic effects of eutrophication are well understood but its effect on organic carbon (OC) sequestration by lakes and its change overtime has not been determined. Here, we compile data from ~90 culturally impacted European lakes [~60% are eutrophic, Total P (TP) >30 μg P l(-1) ] and determine the extent to which OC burial rates have increased over the past 100-150 years. The average focussing corrected, OC accumulation rate (C ARFC ) for the period 1950-1990 was ~60 g C m(-2) yr(-1) , and for lakes with >100 μg TP l(-1) the average was ~100 g C m(-2) yr(-1) . The ratio of post-1950 to 1900-1950 C AR is low (~1.5) indicating that C accumulation rates have been high throughout the 20th century. Compared to background estimates of OC burial (~5-10 g C m(-2) yr(-1) ), contemporary rates have increased by at least four to fivefold. The statistical relationship between C ARFC and TP derived from this study (r(2) = 0.5) can be used to estimate OC burial at sites lacking estimates of sediment C-burial. The implications of eutrophication, diagenesis, lake morphometry and sediment focussing as controls of OC burial rates are considered. A conservative interpretation of the results of the this study suggests that lowland European meso- to eutrophic lakes with >30 μg TP l(-1) had OC burial rates in excess of 50 g C m(-2) yr(-1) over the past century, indicating that previous estimates of regional lake OC burial have seriously underestimated their contribution to European carbon sequestration. Enhanced OC burial by lakes is one positive side-effect of the otherwise negative impact of the anthropogenic disruption of nutrient cycles. © 2014 John Wiley & Sons Ltd.

Moses presages Kubler-Ross: five stages in accepting death, as seen in the midrash.

PubMed

Berkowitz, M C; Knight, L

2001-11-01

This paper elucidates and explains an ancient midrash (rabbinic interpretation of a biblical text) through the lens of modern psychological theory. The midrash describes Moses' reactions to his approaching death. The paper points out that these reactions anticipate the five classic stages, described by Elizabeth Kubler-Ross, of coming to accept terminal illness: denial, anger, bargaining, depression and acceptance. The article shows the ancient rabbis' sensitivity to human feeling and the universal nature of human reaction through the dialogue and reactions they attribute to Moses. Finally, it shows how using this midrash offers a constructive model for approaching death, for Jewish and non-Jewish patients alike, as well as their caregivers.

Spatial and temporal patterns of stream burial and its effect on habitat connectivity across headwater stream communities of the Potomac River Basin, USA

NASA Astrophysics Data System (ADS)

Weitzell, R.; Guinn, S. M.; Elmore, A. J.

2012-12-01

The process of directing streams into culverts, pipes, or concrete-lined ditches during urbanization, known as stream burial, alters the primary physical, chemical, and biological processes of streams. Knowledge of the cumulative impacts of reduced structure and ecological function within buried stream networks is crucial for informing management of stream ecosystems, in light of continued growth in urban areas, and the uncertain response of freshwater ecosystems to the stresses of global climate change. To address this need, we utilized recently improved stream maps for the Potomac River Basin (PRB) to describe the extent and severity of stream burial across the basin. Observations of stream burial made from high resolution aerial photographs (>1% of total basin area) and a decision tree using spatial statistics from impervious cover data were used to predict stream burial at 4 time-steps (1975, 1990, 2001, 2006). Of the roughly 95,500 kilometers (km) of stream in the PRB, approximately 4551 km (4.76%) were buried by urban development as of 2001. Analysis of county-level burial trends shows differential patterns in the timing and rates of headwater stream burial, which may be due to local development policies, topographical constraints, and/or time since development. Consistently higher rates of stream burial were observed for small streams, decreasing with stream order. Headwater streams (1st-2nd order) are disproportionately affected, with burial rates continuing to increase over time in relation to larger stream orders. Beyond simple habitat loss, headwater burial decreases connectivity among headwater populations and habitats, with potential to affect a wide range of important ecological processes. To quantify changes to regional headwater connectivity we applied a connectivity model based on electrical circuit theory. Circuit-theoretical models function by treating the landscape as a resistance surface, representing hypothesized relationships between landscape features and their differential "resistance" to movement by organisms. A landscape resistance layer was developed and fine-tuned in terms of the habitat use/needs of aquatic invertebrates with terrestrial adult stages, organisms of critical importance to riparian and aquatic ecosystem health. Initial results show significant increases in landscape resistance (isolation) among headwater systems, and corresponding decreases in current flow (movement of organisms) across the increasingly urbanized PRB landscape. Of particular interest, the circuit model highlighted the importance of stream confluences and zero-order (non-channel) headwater areas for movement of organisms between headwater systems that are otherwise highly disconnected, and for which the latter currently receives no legal protection from development.

Characterization of 618-11 solid waste burial ground, disposed waste, and description of the waste generating facilities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hladek, K.L.

1997-10-07

The 618-11 (Wye or 318-11) burial ground received transuranic (TRTJ) and mixed fission solid waste from March 9, 1962, through October 2, 1962. It was then closed for 11 months so additional burial facilities could be added. The burial ground was reopened on September 16, 1963, and continued operating until it was closed permanently on December 31, 1967. The burial ground received wastes from all of the 300 Area radioactive material handling facilities. The purpose of this document is to characterize the 618-11 solid waste burial ground by describing the site, burial practices, the disposed wastes, and the waste generatingmore » facilities. This document provides information showing that kilogram quantities of plutonium were disposed to the drum storage units and caissons, making them transuranic (TRU). Also, kilogram quantities of plutonium and other TRU wastes were disposed to the three trenches, which were previously thought to contain non-TRU wastes. The site burial facilities (trenches, caissons, and drum storage units) should be classified as TRU and the site plutonium inventory maintained at five kilograms. Other fissile wastes were also disposed to the site. Additionally, thousands of curies of mixed fission products were also disposed to the trenches, caissons, and drum storage units. Most of the fission products have decayed over several half-lives, and are at more tolerable levels. Of greater concern, because of their release potential, are TRU radionuclides, Pu-238, Pu-240, and Np-237. TRU radionuclides also included slightly enriched 0.95 and 1.25% U-231 from N-Reactor fuel, which add to the fissile content. The 618-11 burial ground is located approximately 100 meters due west of Washington Nuclear Plant No. 2. The burial ground consists of three trenches, approximately 900 feet long, 25 feet deep, and 50 feet wide, running east-west. The trenches constitute 75% of the site area. There are 50 drum storage units (five 55-gallon steel drums welded together) buried in three rows in the northeast comer. In addition, five eight-foot diameter caissons are located at the west end of the center row of the drum storage units. Initially, wastes disposed to the caissons and drum storage units were from the 325 and 327 building hot cells. Later, a small amount of remote-handled (RH) waste from the 309 building Plutonium Recycle Test Reactor (PRTR) cells, and the newly built 324 building hot cells, was disposed at the site.« less

Elucidation of cross-species proteomic effects in human and hominin bone proteome identification through a bioinformatics experiment.

PubMed

Welker, F

2018-02-20

The study of ancient protein sequences is increasingly focused on the analysis of older samples, including those of ancient hominins. The analysis of such ancient proteomes thereby potentially suffers from "cross-species proteomic effects": the loss of peptide and protein identifications at increased evolutionary distances due to a larger number of protein sequence differences between the database sequence and the analyzed organism. Error-tolerant proteomic search algorithms should theoretically overcome this problem at both the peptide and protein level; however, this has not been demonstrated. If error-tolerant searches do not overcome the cross-species proteomic issue then there might be inherent biases in the identified proteomes. Here, a bioinformatics experiment is performed to test this using a set of modern human bone proteomes and three independent searches against sequence databases at increasing evolutionary distances: the human (0 Ma), chimpanzee (6-8 Ma) and orangutan (16-17 Ma) reference proteomes, respectively. Incorrectly suggested amino acid substitutions are absent when employing adequate filtering criteria for mutable Peptide Spectrum Matches (PSMs), but roughly half of the mutable PSMs were not recovered. As a result, peptide and protein identification rates are higher in error-tolerant mode compared to non-error-tolerant searches but did not recover protein identifications completely. Data indicates that peptide length and the number of mutations between the target and database sequences are the main factors influencing mutable PSM identification. The error-tolerant results suggest that the cross-species proteomics problem is not overcome at increasing evolutionary distances, even at the protein level. Peptide and protein loss has the potential to significantly impact divergence dating and proteome comparisons when using ancient samples as there is a bias towards the identification of conserved sequences and proteins. Effects are minimized between moderately divergent proteomes, as indicated by almost complete recovery of informative positions in the search against the chimpanzee proteome (≈90%, 6-8 Ma). This provides a bioinformatic background to future phylogenetic and proteomic analysis of ancient hominin proteomes, including the future description of novel hominin amino acid sequences, but also has negative implications for the study of fast-evolving proteins in hominins, non-hominin animals, and ancient bacterial proteins in evolutionary contexts.

[PALEOPATHOLOGY OF HUMAN REMAINS].

PubMed

Minozzi, Simona; Fornaciari, Gino

2015-01-01

Many diseases induce alterations in the human skeleton, leaving traces of their presence in ancient remains. Paleopathological examination of human remains not only allows the study of the history and evolution of the disease, but also the reconstruction of health conditions in the past populations. This paper describes the most interesting diseases observed in skeletal samples from the Roman Imperial Age necropoles found in urban and suburban areas of Rome during archaeological excavations in the last decades. The diseases observed were grouped into the following categories: articular diseases, traumas, infections, metabolic or nutritional diseases, congenital diseases and tumours, and some examples are reported for each group. Although extensive epidemiological investigation in ancient skeletal records is impossible, the palaeopathological study allowed to highlight the spread of numerous illnesses, many of which can be related to the life and health conditions of the Roman population.

Time since death and decomposition of the human body: variables and observations in case and experimental field studies.

PubMed

Mann, R W; Bass, W M; Meadows, L

1990-01-01

Much of the difficulty in determining the time since death stems from the lack of systematic observation and research on the decomposition rate of the human body. Continuing studies conducted at the University of Tennessee, Knoxville, provide useful information on the impact of carrion insect activity, ambient temperature, rainfall, clothing, burial and depth, carnivores, bodily trauma, body weight, and the surface with which the body is in contact. This paper reports findings and observations accumulated during eight years of research and case studies that may clarify some of the questions concerning bodily decay.

Sacred space and the healing journey.

PubMed

Alt, Paul L

2017-07-01

Sacred space and spirituality have long been used to heal the mind, body, and spirit. This article illuminates the origins of sacred space and its role as a healing environment from the first human construct, the burial mound, to the 5th Century BCE Greek healing city of Epidaurus. It then examines the role of spirituality as one of the necessary human institutions for a healthy society, according to the Italian philosopher Giambattista Vico. The conclusion then surveys three contemporary healing environments' architecture, the Department of Veteran Affairs Healing Environment Design Guideline (VAHEDG), and how these sacred spaces mend individual and community ailments.

The Landmark Space Age Thucydides: Human Spaceflight in the State Grand Strategic Quest to Address Fears, Advance Interests, and Garner Honor

DTIC Science & Technology

2011-06-01

135. The Space Age Thucydides Model In his seminal work on the Peloponnesian Wars, Thucydides, an ancient Greek general and historian...loss of existing power, interest seeks to aggrandize more power then what currently exists. 11 David Kagan, The Peloponnesian War (New York, NY... ancient civilizations partly because of its advanced road-building acumen.13 Technologically superior sea-faring nations, such as Great Britain

Molecular study on human tuberculosis in three geographically distinct and time delineated populations from ancient Egypt.

PubMed Central

Zink, A. R.; Grabner, W.; Reischl, U.; Wolf, H.; Nerlich, A. G.

2003-01-01

We describe the molecular identification of human tuberculosis (TB) from vertebral bone tissue samples from three different populations of ancient Egypt. The specimens were obtained from the predynastic to early dynastic necropolis of Abydos (7 individuals, c. 3500-2650 B.C.), from a Middle Kingdom to Second Intermediate Period tomb of the necropolis of Thebes-West (37. c. 2100-1550 B.C.) and from five further Theban tombs used in the New Kingdom and the Late Period (39, c. 1450-500 B.C.). A total of 18 cases tested positive for the presence of ancient DNA (aDNA) of the M. tuberculosis complex. Out of the 9 cases with typical macromorphological signs of tuberculous spondylitis, 6 were positive for mycobacterial aDNA (66.7%). Of 24 cases with non-specific pathological alterations, 5 provided a positive result (20.8%). In 50 cases of normally appearing vertebral bones 7 tested positive (14.0%). There were only minor differences in the frequencies between the three populations. These data strongly support the notion that tuberculosis was present and prevalent in ancient Egypt since very early periods of this civilization. The unexpectedly high rate of mycobacterial aDNA in normal bone samples is presumably due to a pre- to perimortal systemic spread of the bacteria and indicates a generalized infection by M. tuberculosis. PMID:12729192

Diversity and evolution of the primate skin microbiome

PubMed Central

Council, Sarah E.; Savage, Amy M.; Urban, Julie M.; Ehlers, Megan E.; Skene, J. H. Pate; Platt, Michael L.; Dunn, Robert R.; Horvath, Julie E.

2016-01-01

Skin microbes play a role in human body odour, health and disease. Compared with gut microbes, we know little about the changes in the composition of skin microbes in response to evolutionary changes in hosts, or more recent behavioural and cultural changes in humans. No studies have used sequence-based approaches to consider the skin microbe communities of gorillas and chimpanzees, for example. Comparison of the microbial associates of non-human primates with those of humans offers unique insights into both the ancient and modern features of our skin-associated microbes. Here we describe the microbes found on the skin of humans, chimpanzees, gorillas, rhesus macaques and baboons. We focus on the bacterial and archaeal residents in the axilla using high-throughput sequencing of the 16S rRNA gene. We find that human skin microbial communities are unique relative to those of other primates, in terms of both their diversity and their composition. These differences appear to reflect both ancient shifts during millions of years of primate evolution and more recent changes due to modern hygiene. PMID:26763711

Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes

PubMed Central

Doerr, Daniel; Chauve, Cedric

2017-01-01

Yersinia pestis is the causative agent of the bubonic plague, a disease responsible for several dramatic historical pandemics. Progress in ancient DNA (aDNA) sequencing rendered possible the sequencing of whole genomes of important human pathogens, including the ancient Y. pestis strains responsible for outbreaks of the bubonic plague in London in the 14th century and in Marseille in the 18th century, among others. However, aDNA sequencing data are still characterized by short reads and non-uniform coverage, so assembling ancient pathogen genomes remains challenging and often prevents a detailed study of genome rearrangements. It has recently been shown that comparative scaffolding approaches can improve the assembly of ancient Y. pestis genomes at a chromosome level. In the present work, we address the last step of genome assembly, the gap-filling stage. We describe an optimization-based method AGapEs (ancestral gap estimation) to fill in inter-contig gaps using a combination of a template obtained from related extant genomes and aDNA reads. We show how this approach can be used to refine comparative scaffolding by selecting contig adjacencies supported by a mix of unassembled aDNA reads and comparative signal. We applied our method to two Y. pestis data sets from the London and Marseilles outbreaks, for which we obtained highly improved genome assemblies for both genomes, comprised of, respectively, five and six scaffolds with 95 % of the assemblies supported by ancient reads. We analysed the genome evolution between both ancient genomes in terms of genome rearrangements, and observed a high level of synteny conservation between these strains. PMID:29114402

Antagonistic effects of drought and sand burial enable the survival of the biocrust moss Bryum argenteum in an arid sandy desert

NASA Astrophysics Data System (ADS)

Jia, Rongliang; Zhao, Yun; Gao, Yanhong; Hui, Rong; Yang, Haotian; Wang, Zenru; Li, Yixuan

2018-02-01

Biocrust moss is an essential soil surface bio-cover. It can represent the latest succession stage among the diverse range of surface-dwelling cryptogams (e.g., cyanobacteria, green algae, and lichen, which are also referred to as biocrusts), and it can make a major contribution to soil stability and fertility in many arid sandy desert ecosystems. The soil surface represents a very large ecological niche that is poikilohydric in nature. Biocrust moss is therefore highly susceptible to drought and sand burial, which are two ubiquitous stressors in arid sandy deserts. However, little information is available regarding the mechanism by which biocrust moss can survive and flourish in these habitats when stressed simultaneously by the two stressors. The combined effects of drought and sand burial were evaluated in a field experiment using the predominant biocrust moss, Bryum argenteum Hedw., in the Tengger Desert, China. Drought was simulated by applying distilled water in three artificial rainfall regimes at 8-day intervals in spring and autumn: 4 and 6 mm (average rainfall, control), 2 and 3 mm (double drought), and 1 and 1.5 mm (4-fold drought), respectively. The effect of sand burial was determined by applying six treatments, i.e., sand depths of 0 (control), 0.5, 1, 2, 4, and 10 mm. The four parameters of chlorophyll a content, PSII photochemical efficiency, regeneration potential, and shoot upgrowth were evaluated in the moss. It was found that the combined effects of drought and sand burial did not exacerbate the single negative effects of the four parameters tested. Drought significantly ameliorated the negative effects of deep-sand burial on the retention of chlorophyll a content, PSII photochemical efficiency, and the regeneration potential of B. argenteum. Sand burial diminished and even reversed the negative effects of drought on the maintenance of chlorophyll a content, PSII photochemical efficiency, and regeneration potential. Although drought and sand burial imposed an additive negative effect on shoot upgrowth, which suggested a trade-off between growth ability and stress tolerance, their mutually antagonistic effect on the physiological vigor of B. argenteum provided an opportunity for the biocrust moss to overcome the two co-occurring stressors. In addition to providing a strong stress tolerance, drought and sand burial may provide an important mechanism for the biodiversity maintenance of biocrust mosses in arid sandy ecosystems.