Workshops for the Handicapped; An Annotated Bibliography - No. 6.

ERIC Educational Resources Information Center

Perkins, Dorothy C., Comp.; And Others

An annotated bibliography of workshops for the handicapped covers the literature on work programs for the period July, 1968 through June, 1969. One hundred and fifty four publications were reviewed; the number of articles on administration, management, and planning of facilities and programs has increased since the last edition. (Author/RJ)

Hand in Hand: Selected Reprints and Annotated Bibliography on Working with Students Who Are Deaf-Blind.

ERIC Educational Resources Information Center

Huebner, Kathleen Mary, Ed.; And Others

The items in this collection of reprints and an annotated bibliography were selected because of their value to classroom teachers working with deaf-blind students. Reprinted articles, originally published in various periodicals between 1978 and 1993, are grouped into five categories: (1) communication, (2) orientation and mobility, (3) functional…

Materials from the National Arts and the Handicapped Information Service: Annotated Bibliography. Second Draft.

ERIC Educational Resources Information Center

National Arts and the Handicapped Information Service, New York, NY.

This annotated bibliography describes media and materials on the subject of arts and handicapped persons, including books, recordings, films, and materials transcribed in braille and large print. Only materials produced since 1970 are listed; the many articles, magazines, and dissertations that were published in this period are not included.…

Endangered Species: An Educator's Handbook.

ERIC Educational Resources Information Center

Smith, Jean, M., Comp.

Presented are two articles, an annotated bibliography, and other information useful in teaching about endangered species, especially those found in Florida. The articles provide an ethical rationale, teaching suggestions, and a discussion of the value of wildlife. Descriptions of over 100 pertinent books, periodicals, movies, and filmstrips are in…

Aspects of U.S. Information Policy: An Annotated Bibliography of Federal Laws, Policies, Regulations, Congressional Hearings with Related Monographs, Serials and Studies from the Private Sector.

ERIC Educational Resources Information Center

National Commission on Libraries and Information Science, Washington, DC.

This annotated bibliography covers the period from 1974 to 1981, with primary emphasis on documents and publications produced between 1978 and 1981. The majority of the publications cited are U.S. government documents; however, the last section includes relevant monographs, journal articles, and conference papers that were selected by the National…

Record of Current Educational Publications. Bulletin, 1930, No. 15

ERIC Educational Resources Information Center

McCabe, Martha R., Comp.

1930-01-01

This bulletin provides an annotated, classified bibliography of books, articles from periodicals, reports, surveys, proceedings of associations, and investigations and research into present educational conditions for the period of January to March, 1930, inclusive. An index will be provided for the series of records of the year, to contain author…

Selected Bibliography and Abstracts of Educational Materials in Pakistan. Volume 14, No. 2, 1980. Period Covered April-June 1980.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated listing cites newspaper articles, government publications, journal articles, and monographs dealing with education in Pakistan. Items cited were published between April and June 1980. The listing is organized by subject area. Subjects include administration, organization, and financing of education; curriculum; development of…

Selected Bibliography and Abstracts of Educational Materials in Pakistan. Volume 14, Number 1, 1980. Period Covered January-March 1980.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated bibliography cites newspaper articles, government publications, and journal articles dealing with education in Pakistan. Items listed were published between January and March 1980. Topics covered include the following: educational administration, organization and financing; childhood education; curriculum; educational goals,…

Robot Dreams: Build Your Own R2D2.

ERIC Educational Resources Information Center

Hook, David

2002-01-01

This collection development article presents an annotated bibliography that includes materials on the rapidly changing field of robotics and how to build robots. Includes considering users' skill levels; basic electronics for beginners; combat robots; periodicals; and Web Sites. (LRW)

Bibliography on Physical Education, 1974.

ERIC Educational Resources Information Center

Buell, Charles

The revised 1974 bibliography on physical education contains an annotated listing of approximately 75 books, articles, periodicals, newsletters, films, slides, and videotapes for use in programing for visually impaired persons. Activities covered include adapted, corrective, and developmental physical education; swimming; athletics; dance; motor…

A Bibliography of Publications about the Educational Resources Information Center (Covering the Period 1985-1988).

ERIC Educational Resources Information Center

Brandhorst, Ted, Ed.

The result of a comprehensive search for writings about the Educational Resources Information Center (ERIC) published between 1985 and 1988, this annotated bibliography lists 107 documents and journal articles about ERIC that were entered in the ERIC database during that period. The 1964-1978 edition cited 269 items. The 1979-1984 edition cited…

Periodicals For Teaching Economics: A Dozen Ammunition Sources on Current Economic Affairs.

ERIC Educational Resources Information Center

Pisciotta, John

1984-01-01

Provides an annotated bibliography of 12 free publications which, taken together, provide a supply of readable articles for high school economics instruction. Among those listed are "The Background and Issue Bulletin,""Brookings Review,""Business Review," and "Coordinated Action." (JDH)

Consumer Education Bibliography.

ERIC Educational Resources Information Center

New York Public Library, NY.

This second edition, annotated bibliography contains over 4,000 books, pamphlets, periodical articles, audiovisual aids, and teacher materials relating to consumer interests and consumer education. The recent proliferation of materials has made it impossible to produce an exhaustive listing. The authors instead have attempted to provide an…

Cultural Awareness: A Resource Bibliography.

ERIC Educational Resources Information Center

Schmidt, Velma E.; McNeill, Earldene

This annotated bibliography cites books for children and resource materials such as books and articles, bibliographies, catalogs, and periodicals for adults which deal with various aspects of different cultures. Posters, pictures, records, films, filmstrips, slides, dolls, and museums which pertain to particular cultures are also listed. Separate…

A Resource on Behavioral Terminology: An Annotated Bibliography of "On Terms" Articles in "The Behavior Analyst"

ERIC Educational Resources Information Center

Carr, James E.; Briggs, Adam M.

2011-01-01

An annotated bibliography that summarizes the "On Terms" articles on behavior-analytic terminology from "The Behavior Analyst" is provided. Thirty-five articles published between 1979 and 2010 were identified, annotated, and classified using common behavior analysis course content frameworks. (Contains 1 table.)

Information Resources Management. A Bibliography with Indexes, 1984-1989. A Selection of Annotated References to Reports and Journal Articles Entered into the NASA Scientific and Technical Information System from 1984 through 1989.

ERIC Educational Resources Information Center

National Aeronautics and Space Administration, Washington, DC. Scientific and Technical Information Branch.

This information resources management (IRM) bibliography provides abstracts of reports and journal articles entered in the National Aeronautics and Space Administration (NASA) scientific and technical information system over a 6-year period. These abstracts are presented in 10 areas: (1) IRM activities and planning; (2) computers,…

An Annotated Bibliography of Verbal Behavior Articles Published outside of "The Analysis of Verbal Behavior: 2016"

ERIC Educational Resources Information Center

Lechago, Sarah A.; Jackson, Rachel E.; Oda, Fernanda S.

2017-01-01

An annotated bibliography is provided that summarizes journal articles on verbal behavior published outside of "The Analysis of Verbal Behavior" in 2016, the primary journal for scholarship in this area. Thirty-seven such articles were identified and annotated as a resource for practitioners, researchers, and educators.

An Annotated Bibliography of Verbal Behavior Articles Published outside of "The Analysis of Verbal Behavior": 2015

ERIC Educational Resources Information Center

Lechago, Sarah A.; Phillips, Lauren A.

2016-01-01

An annotated bibliography is provided that summarizes journal articles on verbal behavior published outside of "The Analysis of Verbal Behavior" in 2015, the primary journal for scholarship in this area. Thirty such articles were identified and annotated as a resource for practitioners, researchers, and educators.

Selected Bibliography and Abstracts of Educational Materials in Pakistan, Vol. 13, No. 3, 1979. Period Covered: July - September, 1979.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated bibliography contains 89 citations of journals, newspaper articles, textbooks, and government publications from Pakistan published between July and September 1979. Entries are arranged alphabetically by author in 21 categories--administration, adult education, agricultural education, curriculum, educational goals, educational…

Record of Current Educational Publications. Bulletin, 1929, No. 33

ERIC Educational Resources Information Center

Office of Education, United States Department of the Interior, 1929

1929-01-01

This bulletin provides an annotated, classified bibliography of books, articles from periodicals, reports, surveys, proceedings of associations, and investigations and research into present educational conditions received by the library of the Office of Education during the first six months of 1929, January to June, inclusive. An index will be…

The Design of English Elementary and Primary Schools. A Select Annotated Bibliography.

ERIC Educational Resources Information Center

McNicholas, John, Comp.

School building design in this publication is interpreted as meaning layout and arrangement of rooms rather than as architectural style. Citations are organized under (1) central authority publications, (2) local authority publications, (3) general works, (4) articles in periodicals, and (5) unpublished theses. (Author/MLF)

A Bibliography of Recreational Mathematics, Volume 3.

ERIC Educational Resources Information Center

Schaaf, William L.

This book is a partially annotated bibliography of books, articles and periodicals concerned with mathematical games, puzzles, tricks, amusements, and paradoxes. Because the literature in recreational mathematics has proliferated to amazing proportions since Volume 2 of this series (ED 040 874), Volume 3 is more than just an updating of the…

Science Policy Reviews, Volume 5 Number 4.

ERIC Educational Resources Information Center

Simons, Eugene M., Ed.

Presented in this final issue of a quarterly publication are reviews, highlights, and 391 annotated bibliographic references from current and international literature in the area of science and public policy. The literature reviewed includes books, reports, and periodical articles and focuses on matters of broad public policy. In addition to the…

Galileo's Discorsi as a Tool for the Analytical Art.

PubMed

Raphael, Renee Jennifer

2015-01-01

A heretofore overlooked response to Galileo's 1638 Discorsi is described by examining two extant copies of the text (one which has received little attention in the historiography, the other apparently unknown) which are heavily annotated. It is first demonstrated that these copies contain annotations made by Seth Ward and Sir Christopher Wren. This article then examines one feature of Ward's and Wren's responses to the Discorsi, namely their decision to re-write several of Galileo's geometrical demonstrations into the language of symbolic algebra. It is argued that this type of active reading of period mathematical texts may have been part of the regular scholarly and pedagogical practices of early modern British mathematicians like Ward and Wren. A set of Appendices contains a transcription and translation of the analytical solutions found in these annotated copies.

CF CIMIC Operations 1990-2010: An Annotated Bibliography

DTIC Science & Technology

2010-12-01

those who will be involved in negotiations during their deployments. Canada, Department of National Defence, “Operation Assistance: Lessons ...publications cover the period from 1990 to 2010. As a whole, the books, articles, monographs, and manuals listed below provide a partial history ...activités de la COCIM ainsi qu’une analyse de ses fonctions durant la période de l’après- guerre froide. Les articles choisis traitent de la planification

The Geology of Burma (Myanmar): An Annotated Bibliography of Burma’s Geology, Geography and Earth Science

DTIC Science & Technology

2008-09-01

about the region includes maps and links to related Web sites. Notes: Named Corp: Mekong River Commission. Genre/Form: Article/ Paper /Report. Map...unequalled in its coverage of international literature of the core scientific and technical periodicals. Papers are selected, read, and classified...includes refereed scientific papers ; trade journal and magazine articles, product reviews, directories and any other relevant material. GEOBASE has a

Concept annotation in the CRAFT corpus.

PubMed

Bada, Michael; Eckert, Miriam; Evans, Donald; Garcia, Kristin; Shipley, Krista; Sitnikov, Dmitry; Baumgartner, William A; Cohen, K Bretonnel; Verspoor, Karin; Blake, Judith A; Hunter, Lawrence E

2012-07-09

Manually annotated corpora are critical for the training and evaluation of automated methods to identify concepts in biomedical text. This paper presents the concept annotations of the Colorado Richly Annotated Full-Text (CRAFT) Corpus, a collection of 97 full-length, open-access biomedical journal articles that have been annotated both semantically and syntactically to serve as a research resource for the biomedical natural-language-processing (NLP) community. CRAFT identifies all mentions of nearly all concepts from nine prominent biomedical ontologies and terminologies: the Cell Type Ontology, the Chemical Entities of Biological Interest ontology, the NCBI Taxonomy, the Protein Ontology, the Sequence Ontology, the entries of the Entrez Gene database, and the three subontologies of the Gene Ontology. The first public release includes the annotations for 67 of the 97 articles, reserving two sets of 15 articles for future text-mining competitions (after which these too will be released). Concept annotations were created based on a single set of guidelines, which has enabled us to achieve consistently high interannotator agreement. As the initial 67-article release contains more than 560,000 tokens (and the full set more than 790,000 tokens), our corpus is among the largest gold-standard annotated biomedical corpora. Unlike most others, the journal articles that comprise the corpus are drawn from diverse biomedical disciplines and are marked up in their entirety. Additionally, with a concept-annotation count of nearly 100,000 in the 67-article subset (and more than 140,000 in the full collection), the scale of conceptual markup is also among the largest of comparable corpora. The concept annotations of the CRAFT Corpus have the potential to significantly advance biomedical text mining by providing a high-quality gold standard for NLP systems. The corpus, annotation guidelines, and other associated resources are freely available at http://bionlp-corpora.sourceforge.net/CRAFT/index.shtml.

Concept annotation in the CRAFT corpus

PubMed Central

2012-01-01

Background Manually annotated corpora are critical for the training and evaluation of automated methods to identify concepts in biomedical text. Results This paper presents the concept annotations of the Colorado Richly Annotated Full-Text (CRAFT) Corpus, a collection of 97 full-length, open-access biomedical journal articles that have been annotated both semantically and syntactically to serve as a research resource for the biomedical natural-language-processing (NLP) community. CRAFT identifies all mentions of nearly all concepts from nine prominent biomedical ontologies and terminologies: the Cell Type Ontology, the Chemical Entities of Biological Interest ontology, the NCBI Taxonomy, the Protein Ontology, the Sequence Ontology, the entries of the Entrez Gene database, and the three subontologies of the Gene Ontology. The first public release includes the annotations for 67 of the 97 articles, reserving two sets of 15 articles for future text-mining competitions (after which these too will be released). Concept annotations were created based on a single set of guidelines, which has enabled us to achieve consistently high interannotator agreement. Conclusions As the initial 67-article release contains more than 560,000 tokens (and the full set more than 790,000 tokens), our corpus is among the largest gold-standard annotated biomedical corpora. Unlike most others, the journal articles that comprise the corpus are drawn from diverse biomedical disciplines and are marked up in their entirety. Additionally, with a concept-annotation count of nearly 100,000 in the 67-article subset (and more than 140,000 in the full collection), the scale of conceptual markup is also among the largest of comparable corpora. The concept annotations of the CRAFT Corpus have the potential to significantly advance biomedical text mining by providing a high-quality gold standard for NLP systems. The corpus, annotation guidelines, and other associated resources are freely available at http://bionlp-corpora.sourceforge.net/CRAFT/index.shtml. PMID:22776079

Selected Bibliography and Abstracts of Educational Materials in Pakistan. Volume 14, No. 4, Period Covered October - December, 1980.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated listing cites newspaper articles, government publications, and monographs dealing with education in Pakistan. Items cited were published between October and December 1980. The listing is organized by subject area. Subjects include: administration, organization, and financing of education; adult education; agricultural education;…

Selected Bibliography and Abstracts of Educational Materials in Pakistan. Vol. 14, No. 3. Period Covered July-September, 1980.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated listing cites newspaper articles, government publications, and monographs dealing with education in Pakistan. Items cited were published between July and September 1980. The listing is organized by subject area. Subjects include: administration, organization, and finance of education; adult education; curriculum; development of…

Chicano! A Selected Bibliography of Materials by and About Mexico and Mexican Americans.

ERIC Educational Resources Information Center

Revelle, Keith

Designed for general use by persons interested in Mexican American problems and culture, this annotated bibliography containing approximately 80 entries presents selected materials dating between 1939 and 1968. Materials are grouped under 4 general headings: (1) books, (2) newspapers, (3) periodicals, and (4) articles, reports, and speeches. Book…

A Bibliography of Recreational Mathematics, Volume 1. Fourth Edition.

ERIC Educational Resources Information Center

Schaaf, William L.

This book is a partially annotated bibliography of books, articles, and periodicals concerned with mathematical games, puzzles, and amusements. It is a reprinting of Volume 1 of a three-volume series. This volume, originally published in 1955, treats problems and recreations which have been important in the history of mathematics as well as some…

Selected Bibliography of Educational Materials: Maghreb, Algeria, Libya, Morocco, Tunisia. Vol. 10, No. 3, 1976.

ERIC Educational Resources Information Center

Azzouz, Azzedine; And Others

The bibliography contains 94 English language annotations of newspaper articles and government publications about education in selected North African countries. Most of the entries were published during the period July-September 1976. Organized by country, the bibliography presents sources relating to educational philosophy and theory, teacher…

Animal Rights: Selected Resources and Suggestions for Further Study.

ERIC Educational Resources Information Center

Davidoff, Donald J.

1989-01-01

Presents an annotated list of selected resources intended to serve as a guide to the growing amount of material on animal rights. Suggestions to aid in additional research include subject headings used to find books, indexes used to locate periodical articles, sources for locating organizations, and a selected list of animal rights organizations.…

A Guide to Free and Inexpensive Consumer Education Resources.

ERIC Educational Resources Information Center

Vickers, Carole A.

This guide contains sources of free or inexpensive consumer-education materials for use in schools or for adults. Specific contents include an annotated bibliography of 149 lists of publications dealing with consumer education materials; 77 articles in periodicals published in the 1970s; 53 audiovisuals or multimedia kits; 145 books about consumer…

Selected Bibliography of Educational Materials: Maghreb, Algeria, Libya, Morocco, Tunisia. Vol. 10, No. 4, 1976.

ERIC Educational Resources Information Center

Azzouz, Azzedine; And Others

Ninety-one English language annotations are presented of newspaper articles and government publications about education in Algeria, Libya, Morocco, and Tunisia. Most of the entries were published during the period October-December 1976. Organized by country, the references cover topics of philosophy and theory of education, teacher training,…

Population Education and Socio-Economic Development. Selected Articles and Studies from Periodical Publications. Bibliographies on Population Education No. 2.

ERIC Educational Resources Information Center

United Nations Educational, Scientific, and Cultural Organization, Bangkok (Thailand). Regional Office for Education in Asia and Oceania.

The annotated bibliography lists 299 materials written in the 1970s about population education, with emphasis on the Asian region. Citations are included for journals, newsletters, and serials publications. The objective is to make available information on which curriculum developers, educators, and practising teachers may draw in developing…

Simulation/Games. A Selected Bibliography for the use of Educators/Administrators.

ERIC Educational Resources Information Center

Jensen, Ida-Marie

This partially annotated bibliography on simulation and gaming contains over 1,000 citations arranged alphabetically by author's last name. Types of sources included are books, periodical articles, dissertations, and material in the ERIC system. Dates of citations range from 1956-1971 with most in the mid to late 60's. Also included is a list of…

An Annotated Bibliography of Verbal Behavior Scholarship Published outside of "The Analysis of Verbal Behavior": 2014

ERIC Educational Resources Information Center

Carr, James E.; Nosik, Melissa R.; Lechago, Sarah A.; Phillips, Lauren

2015-01-01

This annotated bibliography summarizes journal articles on verbal behavior published outside of "The Analysis of Verbal Behavior," the primary journal for scholarship in this area. Seventeen such articles were published in 2014 and are annotated as a resource for practitioners, researchers, and educators.

Driven to Abstraction: Abstracts and Annotations as Stiles for the Boundaries of Composition Studies.

ERIC Educational Resources Information Center

Bolin, Bill

This paper describes one academic author's consternation when he came across an annotation of one of his scholarly articles from the "Journal of Basic Writing" in the ERIC database. The paper recounts that the author was disconcerted to find that the annotation was misleading, describing as his main point something that his article warns…

Behavioral Assessment Instruments, Techniques, and Procedures: Summary and Annotated Bibliography.

ERIC Educational Resources Information Center

Shorkey, Clayton T.; Williams, Harry

This annotated bibliography cites 223 articles related to behavioral assessment reported in 18 professional journals between January 1960 and Spring 1976. A summary and a reference grouping of the articles are included to allow for identification of articles related to (1) electromechanical devices used in identification, measurement, and storage…

Health Economics Research: An Annotated Bibliography.

ERIC Educational Resources Information Center

Dillard, Carole D.; And Others

This annotated bibliography lists books and journal articles published since 1976 which deal with health economics and which are based on health services research supported by the National Center for Health Services Research (NCHSR). Articles prepared by NCHSR staff are listed as intramural. All other articles cite the NCHSR grant or contract…

Articles Pertinent to the Campus Press: A Selected Annotated Bibliography

ERIC Educational Resources Information Center

Ardoin, Birthney

1974-01-01

Contains a selected annotated bibliography of 51 items covering articles published from January through August, 1974, organized under the following categories: advertising, broadcasting, media criticism, editorial policy, graphics, job opportunities, pedagogy, and photography. (RB)

TWO-PHASE (GAS-LIQUID) SYSTEM: HEAT TRANSFER AND HYDRAULICS. An Annotated Bibliography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kepple, R.R.; Tung, T.V.

1963-07-01

A bibliography of 2843 references in abstracted form is presented which covers the period l950 to 1962. The references are arranged under the following headings: books and review articles, boiling, bubble, condensation, evaporation, equations of state, interfacial characteristics, mass transfer across phase boundaries, measurement techniques, nuclear reactor heat removal, and twophase flow. An author index is included. (D.L.C.)

Global Climate Change. Selected Annotated Bibliography. Second Edition.

ERIC Educational Resources Information Center

Jones, Douglas E.

This annotated bibliography on global climate change contains 27 articles designed to expand the breadth and depth of information presented in the Global Change Information Packet. Most articles were chosen from journals likely to be available in most medium-sized public or college libraries. The articles cover a variety of topics related to…

Individual Difference Correlates of Second-Language Achievement: An Annotated Bibliography. Research Bulletin No. 667.

ERIC Educational Resources Information Center

Galbraith, Vicki; Gardner, R. C.

The bibliography contains 64 annotated references to journal articles and other sources of information about individual difference correlates of second language achievement. The journal articles appeared between 1984 and 1987. Where available, abstracts contained in the original articles are used; these are marked with asterisks. Entries are coded…

Articles Pertinent to the Campus Press: A Selected Annotated Bibliography

ERIC Educational Resources Information Center

Ardoin, Birthney; And Others

1977-01-01

Lists and annotates articles dealing with such topics as advertising, audience analysis, broadcasting, broadcast law, criticism and defense of media, editorial policy and methods, media policy and methods, journalism education, press law, and school publications. (GW)

Instructional Materials Centers; Annotated Bibliography.

ERIC Educational Resources Information Center

Poli, Rosario, Comp.

An annotated bibliography lists 74 articles and reports on instructional materials centers (IMC) which appeared from 1967-70. The articles deal with such topics as the purposes of an IMC, guidelines for setting up an IMC, and the relationship of an IMC to technology. Most articles deal with use of an IMC on an elementary or secondary level, but…

Discovering gene annotations in biomedical text databases

PubMed Central

Cakmak, Ali; Ozsoyoglu, Gultekin

2008-01-01

Background Genes and gene products are frequently annotated with Gene Ontology concepts based on the evidence provided in genomics articles. Manually locating and curating information about a genomic entity from the biomedical literature requires vast amounts of human effort. Hence, there is clearly a need forautomated computational tools to annotate the genes and gene products with Gene Ontology concepts by computationally capturing the related knowledge embedded in textual data. Results In this article, we present an automated genomic entity annotation system, GEANN, which extracts information about the characteristics of genes and gene products in article abstracts from PubMed, and translates the discoveredknowledge into Gene Ontology (GO) concepts, a widely-used standardized vocabulary of genomic traits. GEANN utilizes textual "extraction patterns", and a semantic matching framework to locate phrases matching to a pattern and produce Gene Ontology annotations for genes and gene products. In our experiments, GEANN has reached to the precision level of 78% at therecall level of 61%. On a select set of Gene Ontology concepts, GEANN either outperforms or is comparable to two other automated annotation studies. Use of WordNet for semantic pattern matching improves the precision and recall by 24% and 15%, respectively, and the improvement due to semantic pattern matching becomes more apparent as the Gene Ontology terms become more general. Conclusion GEANN is useful for two distinct purposes: (i) automating the annotation of genomic entities with Gene Ontology concepts, and (ii) providing existing annotations with additional "evidence articles" from the literature. The use of textual extraction patterns that are constructed based on the existing annotations achieve high precision. The semantic pattern matching framework provides a more flexible pattern matching scheme with respect to "exactmatching" with the advantage of locating approximate pattern occurrences with similar semantics. Relatively low recall performance of our pattern-based approach may be enhanced either by employing a probabilistic annotation framework based on the annotation neighbourhoods in textual data, or, alternatively, the statistical enrichment threshold may be adjusted to lower values for applications that put more value on achieving higher recall values. PMID:18325104

Discovering gene annotations in biomedical text databases.

PubMed

Cakmak, Ali; Ozsoyoglu, Gultekin

2008-03-06

Genes and gene products are frequently annotated with Gene Ontology concepts based on the evidence provided in genomics articles. Manually locating and curating information about a genomic entity from the biomedical literature requires vast amounts of human effort. Hence, there is clearly a need forautomated computational tools to annotate the genes and gene products with Gene Ontology concepts by computationally capturing the related knowledge embedded in textual data. In this article, we present an automated genomic entity annotation system, GEANN, which extracts information about the characteristics of genes and gene products in article abstracts from PubMed, and translates the discoveredknowledge into Gene Ontology (GO) concepts, a widely-used standardized vocabulary of genomic traits. GEANN utilizes textual "extraction patterns", and a semantic matching framework to locate phrases matching to a pattern and produce Gene Ontology annotations for genes and gene products. In our experiments, GEANN has reached to the precision level of 78% at therecall level of 61%. On a select set of Gene Ontology concepts, GEANN either outperforms or is comparable to two other automated annotation studies. Use of WordNet for semantic pattern matching improves the precision and recall by 24% and 15%, respectively, and the improvement due to semantic pattern matching becomes more apparent as the Gene Ontology terms become more general. GEANN is useful for two distinct purposes: (i) automating the annotation of genomic entities with Gene Ontology concepts, and (ii) providing existing annotations with additional "evidence articles" from the literature. The use of textual extraction patterns that are constructed based on the existing annotations achieve high precision. The semantic pattern matching framework provides a more flexible pattern matching scheme with respect to "exactmatching" with the advantage of locating approximate pattern occurrences with similar semantics. Relatively low recall performance of our pattern-based approach may be enhanced either by employing a probabilistic annotation framework based on the annotation neighbourhoods in textual data, or, alternatively, the statistical enrichment threshold may be adjusted to lower values for applications that put more value on achieving higher recall values.

Special Issue: Annotated Bibliography for Volumes XIX-XXXII.

ERIC Educational Resources Information Center

Pullin, Richard A.

1998-01-01

This annotated bibliography lists 310 articles from the "Journal of Cooperative Education" from Volumes XIX-XXXII, 1983-1997. Annotations are presented in the order they appear in the journal; author and subject indexes are provided. (JOW)

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography--October, November, December 1978.

ERIC Educational Resources Information Center

McKerns, Joseph P.; Delahaye, Alfred N.

1979-01-01

Lists and annotates more than 200 articles on mass communication, grouped according to topic. Topics include advertising, broadcasting, courts and law, education for journalism, international, management, public relations, and visual communications. (GT)

DeTEXT: A Database for Evaluating Text Extraction from Biomedical Literature Figures

PubMed Central

Yin, Xu-Cheng; Yang, Chun; Pei, Wei-Yi; Man, Haixia; Zhang, Jun; Learned-Miller, Erik; Yu, Hong

2015-01-01

Hundreds of millions of figures are available in biomedical literature, representing important biomedical experimental evidence. Since text is a rich source of information in figures, automatically extracting such text may assist in the task of mining figure information. A high-quality ground truth standard can greatly facilitate the development of an automated system. This article describes DeTEXT: A database for evaluating text extraction from biomedical literature figures. It is the first publicly available, human-annotated, high quality, and large-scale figure-text dataset with 288 full-text articles, 500 biomedical figures, and 9308 text regions. This article describes how figures were selected from open-access full-text biomedical articles and how annotation guidelines and annotation tools were developed. We also discuss the inter-annotator agreement and the reliability of the annotations. We summarize the statistics of the DeTEXT data and make available evaluation protocols for DeTEXT. Finally we lay out challenges we observed in the automated detection and recognition of figure text and discuss research directions in this area. DeTEXT is publicly available for downloading at http://prir.ustb.edu.cn/DeTEXT/. PMID:25951377

Systems Theory and Communication. Annotated Bibliography.

ERIC Educational Resources Information Center

Covington, William G., Jr.

This annotated bibliography presents annotations of 31 books and journal articles dealing with systems theory and its relation to organizational communication, marketing, information theory, and cybernetics. Materials were published between 1963 and 1992 and are listed alphabetically by author. (RS)

An Annotated Bibliography: Using Theories of Self-Regulation to Understand How Adults Learn in Various Contexts

ERIC Educational Resources Information Center

Artino, Anthony R., Jr.

2007-01-01

The present report presents an annotated bibliography of peer-reviewed articles that employed theories of self-regulation to understand how adults learn in various contexts. Seven scholarly articles, published between 2000 and 2006, were reviewed and summarized. Articles reviewed include (1) Self-regulation in a Web-based Course: A Case Study (J.…

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography--January, February, March 1979.

ERIC Educational Resources Information Center

McKerns, Joseph P.; Delahaye, Alfred N.

1979-01-01

Lists and annotates more than 200 articles on mass communication, grouped according to topic. Topics include advertising, broadcasting, courts and law, government and media, history and biography, international, management, public relations, and visual communication. (GT)

The use of surface geophysical techniques to detect fractures in bedrock; an annotated bibliography

USGS Publications Warehouse

Lewis, Mark R.; Haeni, F.P.

1987-01-01

This annotated bibliography compiles references about the theory and application of surface geophysical techniques to locate fractures or fracture zones within bedrock units. Forty-three publications are referenced, including journal articles, theses, conference proceedings, abstracts, translations, and reports prepared by private contractors and U.S. Government agencies. Thirty-one of the publications are annotated. The remainder are untranslated foreign language articles, which are listed only as bibliographic references. Most annotations summarize the location, geologic setting, surface geophysical technique used, and results of a study. A few highly relevant theoretical studies are annotated also. Publications that discuss only the use of borehole geophysical techniques to locate fractures are excluded from this bibliography. Also excluded are highly theoretical works that may have little or no known practical application.

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography--July, August, September 1979.

ERIC Educational Resources Information Center

Delahaye, Alfred N.; McKerns, Joseph P.

1979-01-01

Lists and annotates more than 200 articles on mass communication, grouped according to topic. Topics include advertising, broadcasting, courts and law, journalism education, history and biography, international, public relations, visual communication, and women and media. (GT)

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography--April, May, June 1979.

ERIC Educational Resources Information Center

McKerns, Joseph P.; Delahaye, Alfred N.

1979-01-01

Lists and annotates 200 articles on mass communication, grouped according to topic. Topics include advertising, audience and communicator analysis, broadcasting, courts and law, education for journalism, government and media, international, management, public relations, and visual communication. (GT)

A sentence sliding window approach to extract protein annotations from biomedical articles

PubMed Central

Krallinger, Martin; Padron, Maria; Valencia, Alfonso

2005-01-01

Background Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been developed during the past years. Nevertheless, there is still a great ned of comparative assessment of the performance of the proposed methods and the development of common evaluation criteria. This issue was addressed by the Critical Assessment of Text Mining Methods in Molecular Biology (BioCreative) contest. The aim of this contest was to assess the performance of text mining systems applied to biomedical texts including tools which recognize named entities such as genes and proteins, and tools which automatically extract protein annotations. Results The "sentence sliding window" approach proposed here was found to efficiently extract text fragments from full text articles containing annotations on proteins, providing the highest number of correctly predicted annotations. Moreover, the number of correct extractions of individual entities (i.e. proteins and GO terms) involved in the relationships used for the annotations was significantly higher than the correct extractions of the complete annotations (protein-function relations). Conclusion We explored the use of averaging sentence sliding windows for information extraction, especially in a context where conventional training data is unavailable. The combination of our approach with more refined statistical estimators and machine learning techniques might be a way to improve annotation extraction for future biomedical text mining applications. PMID:15960831

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography--October, November, December 1979.

ERIC Educational Resources Information Center

McKerns, Joseph P.; Delahaye, Alfred N.

1980-01-01

Lists and annotates more than 200 articles on mass communication, grouped according to topic. Topics include advertising, broadcasting, courts and law, criticism and defense of media, history and biography, international, public relations, visual communication, and women and media. (GT)

College and University Rankings: Part 2--An Annotated Bibliography of Analysis, Criticism, and Evaluation.

ERIC Educational Resources Information Center

Hattendorf, Lynn C.

1987-01-01

This annotated bibliography of recent articles and books on academic rankings updates an article in the Spring 1986 "RQ." Items are listed by subject and ranking in general; individual guides; subject areas including accounting, advertising, biogeography, business, communications, data communications, economics, music, publishing,…

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography

ERIC Educational Resources Information Center

McKerns, Joseph P.; Delahaye, Alfred N.

1978-01-01

Lists and annotates 212 journal articles on mass communication, grouped according to topic. Topics include audience and communicator analysis, broadcasting, communication theory, courts and law, criticism and defense of media, journalism education, government and media, history and biography, international topics, and public relations. (GW)

Annotated Bibliography of Research in the Teaching of English

ERIC Educational Resources Information Center

Beach, Richard; Bigelow, Martha; Dillon, Deborah; Dockter, Jessie; Galda, Lee; Helman, Lori; Kalnin, Julie; Ngo, Bic; O'Brien, David; Sato, Mistilina; Scharber, Cassandra; Jorgensen, Karen; Liang, Lauren; Braaksma, Martine; Janssen, Tanja

2008-01-01

This article presents an annotated bibliography of research in the teaching of English. This annotated bibliography addresses the following topics: (1) discourse/cultural analysis; (2) literacy; (3) literary response/literature/narrative; (4) professional development/teacher education; (5) reading; (6) second language literacy; (7)…

Orienteering: An Annotated Bibliography = Orientierungslauf: Eine kommentierte Bibliographie.

ERIC Educational Resources Information Center

Seiler, Roland, Ed.; Hartmann, Wolfgang, Ed.

1994-01-01

Annotated bibliography of 220 books, monographs, and journal articles on orienteering published 1984-94, from SPOLIT database of the Federal Institute of Sport Science (Cologne, Germany). Annotations in English or German. Ten sections including psychological, physiological, health, sociological, and environmental aspects; training and coaching;…

Broadcast Journalism for the Communication Educator.

ERIC Educational Resources Information Center

Bardgett, Ralph; And Others

This annotated bibliography presents annotations of 61 journal articles (published from 1982 to 1991) which deal with broadcast journalism for the communication educator. The annotations are divided into five main categories: (1) curricular concerns; (2) surveys of the professional environment; (3) professional ethics; (4) technology; and (5)…

Asbestos in Schools. EPA Bibliographic Series.

ERIC Educational Resources Information Center

Environmental Protection Agency, Washington, DC. Library Information Management and Services Div.

This bibliography was compiled as a response to the requests for information on asbestos in schools. The citations are organized by format and include: (1) Environmental Protection Agency (EPA) reports (annotated); (2) books; (3) articles, proceedings and other reports (annotated); and (4) federal regulations and statutes (annotated). The…

Academic Women and Employment Discrimination: A Critical Annotated Bibliography. Cornell Industrial and Labor Relations Bibliography Series Number 16.

ERIC Educational Resources Information Center

Farley, Jennie

This annotated bibliography includes 179 citations of journal articles, books, organizational and research reports, papers, conference proceedings, and newspaper articles on sex discrimination in higher education and efforts to eliminate discrimination. Most of the materials have been published after 1970. An introduction to the bibliography…

Acquisitions List No. 43.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The "Acquisitions List" of demographic books and articles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

Acquisitions List No. 42.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The "Acquisitions List" of demographic books and articles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

An Annotated Bibliography of Some Recent Articles That Correlate with the Sewall Early Education Developmental Program (SEED).

ERIC Educational Resources Information Center

Jackson, Janice; Flamboe, Thomas C.

The annotated bibliography contains approximately 110 references (1969-1976) of articles related to the Sewall Early Education Developmental Program. Entries are arranged alphabetically by author within the following seven topic areas: social emotional, gross motor, fine motor, adaptive reasoning, speech and language, feeding and dressing and…

An Annotated Bibliography: Budgeting in Higher Education.

ERIC Educational Resources Information Center

Emery, Rebecca A.

Though the original focus of this annotated bibliography was upon budgeting in the public community college, its scope was expanded to include articles on budgeting in four-year colleges and in some private two- and four-year institutions when the articles were relevant to community colleges. Due to the inter-relationship between budgeting and…

Articles on Mass Communication in U.S. and Foreign Journals: A Selected Annotated Bibliography--January, February, March 1980.

ERIC Educational Resources Information Center

McKerns, Joseph P.; Delahaye, Alfred N.

1980-01-01

Lists and annotates more than 250 articles on mass communication, grouped according to topic. Topics include advertising, audience and communicator analysis, broadcasting, community journalism, courts and law, criticism and defense of media, education for journalism, history and biography, international, management, public relations, visual…

BioCreative V CDR task corpus: a resource for chemical disease relation extraction.

PubMed

Li, Jiao; Sun, Yueping; Johnson, Robin J; Sciaky, Daniela; Wei, Chih-Hsuan; Leaman, Robert; Davis, Allan Peter; Mattingly, Carolyn J; Wiegers, Thomas C; Lu, Zhiyong

2016-01-01

Community-run, formal evaluations and manually annotated text corpora are critically important for advancing biomedical text-mining research. Recently in BioCreative V, a new challenge was organized for the tasks of disease named entity recognition (DNER) and chemical-induced disease (CID) relation extraction. Given the nature of both tasks, a test collection is required to contain both disease/chemical annotations and relation annotations in the same set of articles. Despite previous efforts in biomedical corpus construction, none was found to be sufficient for the task. Thus, we developed our own corpus called BC5CDR during the challenge by inviting a team of Medical Subject Headings (MeSH) indexers for disease/chemical entity annotation and Comparative Toxicogenomics Database (CTD) curators for CID relation annotation. To ensure high annotation quality and productivity, detailed annotation guidelines and automatic annotation tools were provided. The resulting BC5CDR corpus consists of 1500 PubMed articles with 4409 annotated chemicals, 5818 diseases and 3116 chemical-disease interactions. Each entity annotation includes both the mention text spans and normalized concept identifiers, using MeSH as the controlled vocabulary. To ensure accuracy, the entities were first captured independently by two annotators followed by a consensus annotation: The average inter-annotator agreement (IAA) scores were 87.49% and 96.05% for the disease and chemicals, respectively, in the test set according to the Jaccard similarity coefficient. Our corpus was successfully used for the BioCreative V challenge tasks and should serve as a valuable resource for the text-mining research community.Database URL: http://www.biocreative.org/tasks/biocreative-v/track-3-cdr/. Published by Oxford University Press 2016. This work is written by US Government employees and is in the public domain in the United States.

Acquisitions List Number 38, August-September 1971.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The "Acquisitions List" of demographic books and articles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

Acquisitions List No. 41, January 1972.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The Acquisitions List of demographic books and articles is issued every two months by the Katherine Dexter-McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

Acquisitions List No. 37, June-July 1971.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The Acquisitions List of demographic books and articles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

Acquisitions List No. 40, November-December 1971.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The Acquisitions List of demographic books and articles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

Acquisitions List No. 39, October 1971.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The Acquisitions List of demographic books and articles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the Library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

An Annotated Bibliography of Articles in the "Journal of Speech and Language Pathology-Applied Behavior Analysis"

ERIC Educational Resources Information Center

Esch, Barbara E.; Forbes, Heather J.

2017-01-01

The open-source "Journal of Speech and Language Pathology-Applied Behavior Analysis" ("JSLP-ABA") was published online from 2006 to 2010. We present an annotated bibliography of 80 articles published in the now-defunct journal with the aim of representing its scholarly content to readers of "The Analysis of Verbal…

Biases in the Experimental Annotations of Protein Function and Their Effect on Our Understanding of Protein Function Space

PubMed Central

Schnoes, Alexandra M.; Ream, David C.; Thorman, Alexander W.; Babbitt, Patricia C.; Friedberg, Iddo

2013-01-01

The ongoing functional annotation of proteins relies upon the work of curators to capture experimental findings from scientific literature and apply them to protein sequence and structure data. However, with the increasing use of high-throughput experimental assays, a small number of experimental studies dominate the functional protein annotations collected in databases. Here, we investigate just how prevalent is the “few articles - many proteins” phenomenon. We examine the experimentally validated annotation of proteins provided by several groups in the GO Consortium, and show that the distribution of proteins per published study is exponential, with 0.14% of articles providing the source of annotations for 25% of the proteins in the UniProt-GOA compilation. Since each of the dominant articles describes the use of an assay that can find only one function or a small group of functions, this leads to substantial biases in what we know about the function of many proteins. Mass-spectrometry, microscopy and RNAi experiments dominate high throughput experiments. Consequently, the functional information derived from these experiments is mostly of the subcellular location of proteins, and of the participation of proteins in embryonic developmental pathways. For some organisms, the information provided by different studies overlap by a large amount. We also show that the information provided by high throughput experiments is less specific than those provided by low throughput experiments. Given the experimental techniques available, certain biases in protein function annotation due to high-throughput experiments are unavoidable. Knowing that these biases exist and understanding their characteristics and extent is important for database curators, developers of function annotation programs, and anyone who uses protein function annotation data to plan experiments. PMID:23737737

Behavioral Contributions to Teaching of Psychology: An Annotated Bibliography

PubMed Central

Karsten, Amanda M; Carr, James E

2008-01-01

An annotated bibliography that summarizes behavioral contributions to the journal Teaching of Psychology from 1974 to 2006 is provided. A total of 116 articles of potential utility to college-level instructors of behavior analysis and related areas were identified, annotated, and organized into nine categories for ease of accessibility. PMID:22478500

Prepare-Participate-Connect: Active Learning with Video Annotation

ERIC Educational Resources Information Center

Colasante, Meg; Douglas, Kathy

2016-01-01

Annotation of video provides students with the opportunity to view and engage with audiovisual content in an interactive and participatory way rather than in passive-receptive mode. This article discusses research into the use of video annotation in four vocational programs at RMIT University in Melbourne, which allowed students to interact with…

The U.S. and Mexico, 1910-19, an Annotated Bibliography of Periodical Articles.

DTIC Science & Technology

1987-01-01

send troops to protect the border. The 1913 "plan de la Ciudadela" with Huerta and Felix Diaz was signed in h is of fice and planning f or Madero’s...Mexico would welcome the U.S. with open * arms. Wilson had a mediation Board composed of Argenitina, Brazil, and Chile arbitrate. Nk, >ImWlIe, lie...a , a ’.. , S.. . - -.. b ,. - ? .- ,, -. ’- ,, ., -. ,r . -., , -,o. p,! -n- -.3, de Bopp, Marianno 0. "ŕ Periodismo ALeriian en Mexico

Automatic recognition of conceptualization zones in scientific articles and two life science applications.

PubMed

Liakata, Maria; Saha, Shyamasree; Dobnik, Simon; Batchelor, Colin; Rebholz-Schuhmann, Dietrich

2012-04-01

Scholarly biomedical publications report on the findings of a research investigation. Scientists use a well-established discourse structure to relate their work to the state of the art, express their own motivation and hypotheses and report on their methods, results and conclusions. In previous work, we have proposed ways to explicitly annotate the structure of scientific investigations in scholarly publications. Here we present the means to facilitate automatic access to the scientific discourse of articles by automating the recognition of 11 categories at the sentence level, which we call Core Scientific Concepts (CoreSCs). These include: Hypothesis, Motivation, Goal, Object, Background, Method, Experiment, Model, Observation, Result and Conclusion. CoreSCs provide the structure and context to all statements and relations within an article and their automatic recognition can greatly facilitate biomedical information extraction by characterizing the different types of facts, hypotheses and evidence available in a scientific publication. We have trained and compared machine learning classifiers (support vector machines and conditional random fields) on a corpus of 265 full articles in biochemistry and chemistry to automatically recognize CoreSCs. We have evaluated our automatic classifications against a manually annotated gold standard, and have achieved promising accuracies with 'Experiment', 'Background' and 'Model' being the categories with the highest F1-scores (76%, 62% and 53%, respectively). We have analysed the task of CoreSC annotation both from a sentence classification as well as sequence labelling perspective and we present a detailed feature evaluation. The most discriminative features are local sentence features such as unigrams, bigrams and grammatical dependencies while features encoding the document structure, such as section headings, also play an important role for some of the categories. We discuss the usefulness of automatically generated CoreSCs in two biomedical applications as well as work in progress. A web-based tool for the automatic annotation of articles with CoreSCs and corresponding documentation is available online at http://www.sapientaproject.com/software http://www.sapientaproject.com also contains detailed information pertaining to CoreSC annotation and links to annotation guidelines as well as a corpus of manually annotated articles, which served as our training data. liakata@ebi.ac.uk Supplementary data are available at Bioinformatics online.

Social Psychology of Second Language Acquisition and Bilinguality: An Annotated Bibliography. Research Bulletin No. 340.

ERIC Educational Resources Information Center

Desrochers, Alain M.; And Others

This bibliography includes 333 annotated references and 178 references without annotations. The articles represent a wide variety of work, including theoretical papers, statements of opinions and policy (both political and pedagogical), and empirical studies. The central theme was organized into six topics, which were then used as major categories…

Forecasting Reading Anxiety for Promoting English-Language Reading Performance Based on Reading Annotation Behavior

ERIC Educational Resources Information Center

Chen, Chih-Ming; Wang, Jung-Ying; Chen, Yong-Ting; Wu, Jhih-Hao

2016-01-01

To reduce effectively the reading anxiety of learners while reading English articles, a C4.5 decision tree, a widely used data mining technique, was used to develop a personalized reading anxiety prediction model (PRAPM) based on individual learners' reading annotation behavior in a collaborative digital reading annotation system (CDRAS). In…

The Atomic Papers: A citizen's guide to selected books and articles on the bomb, the arms race, nuclear power, the peace movement, and related issues

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burns, G.

The Atomic Papers annotates over 800 books published since 1945 and approximately 300 periodical articles since 1980 on every facet of the nuclear dilemma: the development and effects of the bomb, the arms race, nuclear proliferation, and the peace movement. Work on both sides of the nuclear power controversy also receives substantial attention. All references are to English-language material, and nearly half are to work published since 1980. The concluding chapter, ''The Art of Fission,'' describes over one hundred novels and stories with nuclear themes published since 1945--and, in a few cases, before that date.

Annotated Bibliography of Children's Literature Resources on War, Terrorism, and Disaster since 1945: By Continents/Countries for Grades K-8

ERIC Educational Resources Information Center

Gangi, Jane M.

2009-01-01

This article presents an annotated bibliography of children's literature resources on war, terrorism, and disaster since 1945. This annotated bibliography focuses on grades K-8 from different continents/countries, including (1) Africa; (2) Asia; (3) The Caribbean; (4) Central and South America; (5) Europe; and (6) The Middle East.

Collaborative capacity, problem framing, and mutual trust in addressing the wildland fire social problem: An annotated reading list

Treesearch

Jeffrey J. Brooks; Alexander N. Bujak; Joseph G. Champ; Daniel R. Williams

2006-01-01

We reviewed, annotated, and organized recent social science research and developed a framework for addressing the wildland fire social problem. We annotated articles related to three topic areas or factors, which are critical for understanding collective action, particularly in the wildland-urban interface. These factors are collaborative capacity, problem framing, and...

Aviation medicine translations : annotated bibliography of recently translated material, VI.

DOT National Transportation Integrated Search

1971-01-01

An annotated bibliography of translations of foreign-language articles is presented. The 22 entries are concerned with studies in aviation medicine, vestibular function, body temperature, color vision, cholinesterase, nystagmus, alcohol, vestibulo-oc...

Aviation medicine translations : annotated bibliography of recently translated material, V .

DOT National Transportation Integrated Search

1968-04-01

An annotated bibliography of translations of foreign-language articles is presented. The 24 entries are concerned with studies in aviation medicine, vestibular function, hearing, intercontinental flight, visual illusions, aviation visual aids, body t...

Aircraft wake vortices : an annotated bibliography (1923-1990)

DOT National Transportation Integrated Search

1991-01-01

This annotated bibliography consists of abstracts of publications on aircraft wake : vortices. The material is arranged alphabetically by author(s) and then by month : and year of publication. Experimental and theoretical articles are included and : ...

An Annotated Bibliography of the Literature Dealing with Adolescent Suicide and What Educators Can Do To Help Reduce This Problem.

ERIC Educational Resources Information Center

Van Dyke, Catherine A.

The purpose of this study was to provide an overview of the complex and growing problem of adolescent suicide. The annotated bibliography consists of 7 articles on recent facts and data, 10 articles on causes determined by research, 11 items on indicators seen in adolescents, and 14 documents on how educators can help. A lack of secure social…

Aviation medicine translations : annotated bibliography of recently translated material, IV.

DOT National Transportation Integrated Search

1966-01-01

An annotated bibliography of translations of foreign-language articles is presented. The 25 listed entries are concerned with studies in aviation medicine, vertigo and nystagmus, physical science, hypoxia, vision, altitude, drugs, binaural hearing, t...

Aviation medicine translations : annotated bibliography of recently translated material, VII.

DOT National Transportation Integrated Search

1972-05-01

An annotated bibliography of translations of foreign-language articles is presented. The 25 listed entries are concerned with studies in aviation medicine, vertigo and nystagmus, physical science, hypoxia, vision, altitude, drugs, binaural hearing, t...

Publication Production: An Annotated Bibliography.

ERIC Educational Resources Information Center

Firman, Anthony H.

1994-01-01

Offers brief annotations of 52 articles and papers on document production (from the Society for Technical Communication's journal and proceedings) on 9 topics: information processing, document design, using color, typography, tables, illustrations, photography, printing and binding, and production management. (SR)

Bibliocable.

ERIC Educational Resources Information Center

Cable Television Information Center, Washington, DC.

This selective, annotated bibliography covers 67 items published on cable television from 1968 to 1972. The books, articles, and report literature included here deal with these topics: introduction, background, access, applications, economic aspects, franchising, regulation, and technology. Each annotation includes sources and ordering…

The BioC-BioGRID corpus: full text articles annotated for curation of protein–protein and genetic interactions

PubMed Central

Kim, Sun; Chatr-aryamontri, Andrew; Chang, Christie S.; Oughtred, Rose; Rust, Jennifer; Wilbur, W. John; Comeau, Donald C.; Dolinski, Kara; Tyers, Mike

2017-01-01

A great deal of information on the molecular genetics and biochemistry of model organisms has been reported in the scientific literature. However, this data is typically described in free text form and is not readily amenable to computational analyses. To this end, the BioGRID database systematically curates the biomedical literature for genetic and protein interaction data. This data is provided in a standardized computationally tractable format and includes structured annotation of experimental evidence. BioGRID curation necessarily involves substantial human effort by expert curators who must read each publication to extract the relevant information. Computational text-mining methods offer the potential to augment and accelerate manual curation. To facilitate the development of practical text-mining strategies, a new challenge was organized in BioCreative V for the BioC task, the collaborative Biocurator Assistant Task. This was a non-competitive, cooperative task in which the participants worked together to build BioC-compatible modules into an integrated pipeline to assist BioGRID curators. As an integral part of this task, a test collection of full text articles was developed that contained both biological entity annotations (gene/protein and organism/species) and molecular interaction annotations (protein–protein and genetic interactions (PPIs and GIs)). This collection, which we call the BioC-BioGRID corpus, was annotated by four BioGRID curators over three rounds of annotation and contains 120 full text articles curated in a dataset representing two major model organisms, namely budding yeast and human. The BioC-BioGRID corpus contains annotations for 6409 mentions of genes and their Entrez Gene IDs, 186 mentions of organism names and their NCBI Taxonomy IDs, 1867 mentions of PPIs and 701 annotations of PPI experimental evidence statements, 856 mentions of GIs and 399 annotations of GI evidence statements. The purpose, characteristics and possible future uses of the BioC-BioGRID corpus are detailed in this report. Database URL: http://bioc.sourceforge.net/BioC-BioGRID.html PMID:28077563

Aviation medicine translations : annotated bibliography of recently translated material, IX.

DOT National Transportation Integrated Search

1976-04-01

An annotated bibliography of translations of foreign-language articles is presented. The 20 listed entries are concerned with studies of cardiology; aviation vestibular testing and vestibular factors in accidents; use of bones of identification of re...

Aviation medicine translations : annotated bibliography of recently translated material, VIII.

DOT National Transportation Integrated Search

1973-12-01

An annotated bibliography of translations of foreign-language articles is presented. The 20 listed entries are concerned with studies of cardiology; aviation vestibular testing and vestibular factors in accidents; use of bones of identification of re...

Mental Health Manpower, Volume I: An Annotated Bibliography and Commentary, and Volume II: Recruitment, Training and Utilization - A Compilation of Articles, Surveys, and a Review of Applicable Literature.

ERIC Educational Resources Information Center

Klutch, Murray

The study was designed to provide a base for mental health manpower planning. The first and principal section of Volume I is an annotated bibliography of applicable articles and books. An index lists items included in the bibliography according to subject and profession. A discussion of two conceptual approaches to alleviating the manpower…

Deburring: an annotated bibliography. Volume VI

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gillespie, L.K.

1980-07-01

An annotated summary of 138 articles and publications on burrs, burr prevention and deburring is presented. Thirty-seven deburring processes are listed. Entries cited include English, Russian, French, Japanese, and German language articles. Entries are indexed by deburring processes, author, and language. Indexes also indicate which references discuss equipment and tooling, how to use a proces economics, burr properties, and how to design to minimize burr problems. Research studies are identified as are the materials deburred.

Deburring: an annotated bibliography. Volume V

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gillespie, L.K.

1978-01-01

An annotated summary of 204 articles and publications on burrs, burr prevention and deburring is presented. Thirty-seven deburring processes are listed. Entries cited include English, Russian, French, Japanese and German language articles. Entries are indexed by deburring processes, author, and language. Indexes also indicate which references discuss equipment and tooling, how to use a process, economics, burr properties, and how to design to minimize burr problems. Research studies are identified as are the materials deburred.

Annotated Bibliography of Recent Research Related to Academic Advising

ERIC Educational Resources Information Center

Mottarella, Karen, Comp.

2011-01-01

This article presents an annotated bibliography of recent research related to academic advising. It includes research papers that focus on advising and a special section of the "Journal of Career Development" that is devoted to multicultural graduate advising relationships.

Education--An Annotated Bibliography of Current Issues, July-September, 1989.

ERIC Educational Resources Information Center

Wardell, David

This annotated bibliography of newspaper and magazine articles on a wide variety of topics in education includes entries from the following publications: "Asahi Evening News,""Asian Wall Street Journal,""Daily Yomiuri,""International Herald Tribune,""Japan Times,""Mainichi Daily…

The gene normalization task in BioCreative III

PubMed Central

2011-01-01

Background We report the Gene Normalization (GN) challenge in BioCreative III where participating teams were asked to return a ranked list of identifiers of the genes detected in full-text articles. For training, 32 fully and 500 partially annotated articles were prepared. A total of 507 articles were selected as the test set. Due to the high annotation cost, it was not feasible to obtain gold-standard human annotations for all test articles. Instead, we developed an Expectation Maximization (EM) algorithm approach for choosing a small number of test articles for manual annotation that were most capable of differentiating team performance. Moreover, the same algorithm was subsequently used for inferring ground truth based solely on team submissions. We report team performance on both gold standard and inferred ground truth using a newly proposed metric called Threshold Average Precision (TAP-k). Results We received a total of 37 runs from 14 different teams for the task. When evaluated using the gold-standard annotations of the 50 articles, the highest TAP-k scores were 0.3297 (k=5), 0.3538 (k=10), and 0.3535 (k=20), respectively. Higher TAP-k scores of 0.4916 (k=5, 10, 20) were observed when evaluated using the inferred ground truth over the full test set. When combining team results using machine learning, the best composite system achieved TAP-k scores of 0.3707 (k=5), 0.4311 (k=10), and 0.4477 (k=20) on the gold standard, representing improvements of 12.4%, 21.8%, and 26.6% over the best team results, respectively. Conclusions By using full text and being species non-specific, the GN task in BioCreative III has moved closer to a real literature curation task than similar tasks in the past and presents additional challenges for the text mining community, as revealed in the overall team results. By evaluating teams using the gold standard, we show that the EM algorithm allows team submissions to be differentiated while keeping the manual annotation effort feasible. Using the inferred ground truth we show measures of comparative performance between teams. Finally, by comparing team rankings on gold standard vs. inferred ground truth, we further demonstrate that the inferred ground truth is as effective as the gold standard for detecting good team performance. PMID:22151901

The gene normalization task in BioCreative III.

PubMed

Lu, Zhiyong; Kao, Hung-Yu; Wei, Chih-Hsuan; Huang, Minlie; Liu, Jingchen; Kuo, Cheng-Ju; Hsu, Chun-Nan; Tsai, Richard Tzong-Han; Dai, Hong-Jie; Okazaki, Naoaki; Cho, Han-Cheol; Gerner, Martin; Solt, Illes; Agarwal, Shashank; Liu, Feifan; Vishnyakova, Dina; Ruch, Patrick; Romacker, Martin; Rinaldi, Fabio; Bhattacharya, Sanmitra; Srinivasan, Padmini; Liu, Hongfang; Torii, Manabu; Matos, Sergio; Campos, David; Verspoor, Karin; Livingston, Kevin M; Wilbur, W John

2011-10-03

We report the Gene Normalization (GN) challenge in BioCreative III where participating teams were asked to return a ranked list of identifiers of the genes detected in full-text articles. For training, 32 fully and 500 partially annotated articles were prepared. A total of 507 articles were selected as the test set. Due to the high annotation cost, it was not feasible to obtain gold-standard human annotations for all test articles. Instead, we developed an Expectation Maximization (EM) algorithm approach for choosing a small number of test articles for manual annotation that were most capable of differentiating team performance. Moreover, the same algorithm was subsequently used for inferring ground truth based solely on team submissions. We report team performance on both gold standard and inferred ground truth using a newly proposed metric called Threshold Average Precision (TAP-k). We received a total of 37 runs from 14 different teams for the task. When evaluated using the gold-standard annotations of the 50 articles, the highest TAP-k scores were 0.3297 (k=5), 0.3538 (k=10), and 0.3535 (k=20), respectively. Higher TAP-k scores of 0.4916 (k=5, 10, 20) were observed when evaluated using the inferred ground truth over the full test set. When combining team results using machine learning, the best composite system achieved TAP-k scores of 0.3707 (k=5), 0.4311 (k=10), and 0.4477 (k=20) on the gold standard, representing improvements of 12.4%, 21.8%, and 26.6% over the best team results, respectively. By using full text and being species non-specific, the GN task in BioCreative III has moved closer to a real literature curation task than similar tasks in the past and presents additional challenges for the text mining community, as revealed in the overall team results. By evaluating teams using the gold standard, we show that the EM algorithm allows team submissions to be differentiated while keeping the manual annotation effort feasible. Using the inferred ground truth we show measures of comparative performance between teams. Finally, by comparing team rankings on gold standard vs. inferred ground truth, we further demonstrate that the inferred ground truth is as effective as the gold standard for detecting good team performance.

Universities of the Caribbean Region--Struggles to Democratize. An Annotated Bibliography.

ERIC Educational Resources Information Center

Waggoner, Barbara Ashton; Waggoner, George R.

An annotated bibliography on universities in the Caribbean region for the period since World War II is presented. The focus is on access to universities. For book citations, each annotation contains the author's name, publication title, place of publication, publisher, date, and number of pages. Journal references consist of author, title of…

Surveys of Librarians' Benefits: An Annotated Bibliography.

ERIC Educational Resources Information Center

Jennerich, Elaine Zaremba; And Others

This annotated bibliography cites 39 titles of reports on academic, research, and public library conditions, which were compiled over a 2-year period by the LAMA/PAS Committee on Economic Status, Welfare and Fringe Benefits. Each annotated item was personally examined by a committee member; the six items in the addendum were not examined because…

Aviation medicine translations : annotated bibliography of recently translated material, X.

DOT National Transportation Integrated Search

1981-01-01

An annotated bibliography of translations of foreign-language articles is presented. Of the 86 listed entries, 53 are concerned with studies of shift work, and 10 are concerned with studies of alcohol. : The remaining entries can be subsumed under th...

Postsecondary Peer Cooperative Learning Programs: Annotated Bibliography 2016

ERIC Educational Resources Information Center

Arendale, David R., Comp.

2016-01-01

Purpose: This 2016 annotated bibliography reviews seven postsecondary peer cooperative learning programs that have been implemented nationally to increase student achievement. Methodology: An extensive literature search was conducted of published journal articles, newspaper accounts, book chapters, books, ERIC documents, thesis and dissertations,…

Postsecondary Peer Cooperative Learning Programs: Annotated Bibliography 2017

ERIC Educational Resources Information Center

Arendale, David R., Comp.

2017-01-01

This 2017 annotated bibliography reviews seven postsecondary peer cooperative learning programs that have been implemented nationally to increase student achievement. An extensive literature search was conducted of published journal articles, newspaper accounts, book chapters, books, ERIC documents, thesis and dissertations, online documents, and…

Suggested Books for Children: An Annotated Bibliography

ERIC Educational Resources Information Center

NHSA Dialog, 2008

2008-01-01

This article provides an annotated bibliography of various children's books. It includes listings of books that illustrate the dynamic relationships within the natural environment, economic context, racial and cultural identities, cross-group similarities and differences, gender, different abilities and stories of injustice and resistance.

The Special-Needs Reading List: An Annotated Guide to the Best Publications for Parents and Professionals.

ERIC Educational Resources Information Center

Sweeney, Wilma K.

This annotated resource guide lists books, periodicals, and organizations relevant to the needs of parents of children with disabilities. The books and periodicals were chosen as being up-to-date, accurate, written in parent-friendly language, written with a parent's information or support needs in mind, generally affordable, or considered a…

Peaceful Peoples: An Annotated Bibliography.

ERIC Educational Resources Information Center

Bonta, Bruce D.

This annotated bibliography includes 438 selected references to books, journal articles, essays within edited volumes, and dissertations that provide significant information about peaceful societies. Peaceful societies are groups that have developed harmonious social structures that allow them to get along with each other, and with outsiders,…

Appalachian Women. An Annotated Bibliography.

ERIC Educational Resources Information Center

Hamm, Mary Margo

This bibliography compiles annotations of 178 books, journal articles, ERIC documents, and dissertations on Appalachian women and their social, cultural, and economic environment. Entries were published 1966-93 and are listed in the following categories: (1) authors and literary criticism; (2) bibliographies and resource guides; (3) economics,…

Public Relations: Selected, Annotated Bibliography.

ERIC Educational Resources Information Center

Demo, Penny

Designed for students and practitioners of public relations (PR), this annotated bibliography focuses on recent journal articles and ERIC documents. The 34 citations include the following: (1) surveys of public relations professionals on career-related education; (2) literature reviews of research on measurement and evaluation of PR and…

Rural Development Literature 1976-1977: An Updated Annotated Bibliography.

ERIC Educational Resources Information Center

Buzzard, Shirley, Comp.

More than 100 books and articles on rural development published during 1976-77 are annotated in this selective bibliography. Concentrating on social science literature, the bibliography is interdisciplinary in nature, spanning agricultural economics, anthropology, community development, community health, and rural sociology. Types of works…

Annotated Bibliography on School Finance: Policy and Political Issues; Federal Government; State Issues; Non-Public Schools; Accountability.

ERIC Educational Resources Information Center

Gipson, Joella

Limited to periodical literature, this annotated bibliography on school finance contains 81 references grouped in 5 categories: (1) policy and politica issues, (2) federal government, (3) state issues, (4) aid to nonpublic schools, and (5) accountability. Following the bibliographic citations, annotations range from 4 to 15 lines and conclude by…

AnnotCompute: annotation-based exploration and meta-analysis of genomics experiments

PubMed Central

Zheng, Jie; Stoyanovich, Julia; Manduchi, Elisabetta; Liu, Junmin; Stoeckert, Christian J.

2011-01-01

The ever-increasing scale of biological data sets, particularly those arising in the context of high-throughput technologies, requires the development of rich data exploration tools. In this article, we present AnnotCompute, an information discovery platform for repositories of functional genomics experiments such as ArrayExpress. Our system leverages semantic annotations of functional genomics experiments with controlled vocabulary and ontology terms, such as those from the MGED Ontology, to compute conceptual dissimilarities between pairs of experiments. These dissimilarities are then used to support two types of exploratory analysis—clustering and query-by-example. We show that our proposed dissimilarity measures correspond to a user's intuition about conceptual dissimilarity, and can be used to support effective query-by-example. We also evaluate the quality of clustering based on these measures. While AnnotCompute can support a richer data exploration experience, its effectiveness is limited in some cases, due to the quality of available annotations. Nonetheless, tools such as AnnotCompute may provide an incentive for richer annotations of experiments. Code is available for download at http://www.cbil.upenn.edu/downloads/AnnotCompute. Database URL: http://www.cbil.upenn.edu/annotCompute/ PMID:22190598

An approach to describing and analysing bulk biological annotation quality: a case study using UniProtKB.

PubMed

Bell, Michael J; Gillespie, Colin S; Swan, Daniel; Lord, Phillip

2012-09-15

Annotations are a key feature of many biological databases, used to convey our knowledge of a sequence to the reader. Ideally, annotations are curated manually, however manual curation is costly, time consuming and requires expert knowledge and training. Given these issues and the exponential increase of data, many databases implement automated annotation pipelines in an attempt to avoid un-annotated entries. Both manual and automated annotations vary in quality between databases and annotators, making assessment of annotation reliability problematic for users. The community lacks a generic measure for determining annotation quality and correctness, which we look at addressing within this article. Specifically we investigate word reuse within bulk textual annotations and relate this to Zipf's Principle of Least Effort. We use the UniProt Knowledgebase (UniProtKB) as a case study to demonstrate this approach since it allows us to compare annotation change, both over time and between automated and manually curated annotations. By applying power-law distributions to word reuse in annotation, we show clear trends in UniProtKB over time, which are consistent with existing studies of quality on free text English. Further, we show a clear distinction between manual and automated analysis and investigate cohorts of protein records as they mature. These results suggest that this approach holds distinct promise as a mechanism for judging annotation quality. Source code is available at the authors website: http://homepages.cs.ncl.ac.uk/m.j.bell1/annotation. phillip.lord@newcastle.ac.uk.

Autism and Childhood Psychosis: Annotated Bibliography 1969-1974.

ERIC Educational Resources Information Center

Erskine, Richard G.; And Others

The annotated bibliography contains approximately 400 citations of articles (1969-1974) on autism and childhood psychosis. It is explained that material was drawn from medical, psychological, social service and educational sources. Entries are arranged in separate sections for autism and childhood psychosis and are presented alphabetically by…

A Selective, Annotated Bibliography for the Language Laboratory, 1959-1971.

ERIC Educational Resources Information Center

Keck, Mary Ellen B., Comp.; Smith, William Flint, Comp.

This annotated bibliography lists 163 selected books, articles, and research reports concerning the language laboratory published from 1959 to 1972. It is intended for foreign language teachers and administrators seeking information on the planning, administration, operation, and installation of mediated language instruction. The bibliography is…

Adolescent Fertility: Selected, Annotated Resources for the International Community.

ERIC Educational Resources Information Center

Ogden, Celia

This bibliography on adolescent fertility contains over 300 annotations of articles, audiovisual materials, books, charts, comic books, games, journals, papers, pamphlets, and packets. With a few exceptions entries were published from 1974 through 1978; they are categorized according to geographic section: World, Africa, Asia, Europe, Latin…

Persuasion: Attitude/Behavior Change. A Selected, Annotated Bibliography.

ERIC Educational Resources Information Center

Benoit, William L.

Designed for teachers, students and researchers of the psychological dimensions of attitude and behavior change, this annotated bibliography lists books, bibliographies and articles on the subject ranging from general introductions and surveys through specific research studies, and from theoretical position essays to literature reviews. The 42…

Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion.

PubMed

Agarwal, Shashank; Yu, Hong

2009-12-01

Biomedical texts can be typically represented by four rhetorical categories: Introduction, Methods, Results and Discussion (IMRAD). Classifying sentences into these categories can benefit many other text-mining tasks. Although many studies have applied different approaches for automatically classifying sentences in MEDLINE abstracts into the IMRAD categories, few have explored the classification of sentences that appear in full-text biomedical articles. We first evaluated whether sentences in full-text biomedical articles could be reliably annotated into the IMRAD format and then explored different approaches for automatically classifying these sentences into the IMRAD categories. Our results show an overall annotation agreement of 82.14% with a Kappa score of 0.756. The best classification system is a multinomial naïve Bayes classifier trained on manually annotated data that achieved 91.95% accuracy and an average F-score of 91.55%, which is significantly higher than baseline systems. A web version of this system is available online at-http://wood.ims.uwm.edu/full_text_classifier/.

In the pursuit of a semantic similarity metric based on UMLS annotations for articles in PubMed Central Open Access.

PubMed

Garcia Castro, Leyla Jael; Berlanga, Rafael; Garcia, Alexander

2015-10-01

Although full-text articles are provided by the publishers in electronic formats, it remains a challenge to find related work beyond the title and abstract context. Identifying related articles based on their abstract is indeed a good starting point; this process is straightforward and does not consume as many resources as full-text based similarity would require. However, further analyses may require in-depth understanding of the full content. Two articles with highly related abstracts can be substantially different regarding the full content. How similarity differs when considering title-and-abstract versus full-text and which semantic similarity metric provides better results when dealing with full-text articles are the main issues addressed in this manuscript. We have benchmarked three similarity metrics - BM25, PMRA, and Cosine, in order to determine which one performs best when using concept-based annotations on full-text documents. We also evaluated variations in similarity values based on title-and-abstract against those relying on full-text. Our test dataset comprises the Genomics track article collection from the 2005 Text Retrieval Conference. Initially, we used an entity recognition software to semantically annotate titles and abstracts as well as full-text with concepts defined in the Unified Medical Language System (UMLS®). For each article, we created a document profile, i.e., a set of identified concepts, term frequency, and inverse document frequency; we then applied various similarity metrics to those document profiles. We considered correlation, precision, recall, and F1 in order to determine which similarity metric performs best with concept-based annotations. For those full-text articles available in PubMed Central Open Access (PMC-OA), we also performed dispersion analyses in order to understand how similarity varies when considering full-text articles. We have found that the PubMed Related Articles similarity metric is the most suitable for full-text articles annotated with UMLS concepts. For similarity values above 0.8, all metrics exhibited an F1 around 0.2 and a recall around 0.1; BM25 showed the highest precision close to 1; in all cases the concept-based metrics performed better than the word-stem-based one. Our experiments show that similarity values vary when considering only title-and-abstract versus full-text similarity. Therefore, analyses based on full-text become useful when a given research requires going beyond title and abstract, particularly regarding connectivity across articles. Visualization available at ljgarcia.github.io/semsim.benchmark/, data available at http://dx.doi.org/10.5281/zenodo.13323. Copyright © 2015 Elsevier Inc. All rights reserved.

Population information resources.

PubMed

Pasquariella, S K

1984-12-01

This article describes print and computerized services that are dedicated to bibliographic coverage of 1 or more areas of population studies. Major printed bibliographic information resources for population material include: ADOPT, DOCPAL Resumenes sobre Poblacion en America Latina, PIDSA Abstracts, Population Index and Review of Population Reviews. ADOPT is an annotated computer-aided current-awareness bibliographic journal which has been published monthly since January 1975 by the Regional Population Information Center of the Economic and Social Commission for Asia and the Pacific (ESCAP). DOCPAL Resumenes is a computer-produced biannual collection of abstracts containing indexes and between 600 and 700 summaries of both published and unpublished population documents. PIDSA is intended to make available documentary information about population matters in sub-Saharan Africa. Population Index, 1 of the oldest and most definitive bibliographies in the demography field, is international in scope and is arranged as a classified and annotated bibliography of monographs, journal articles and 2ndary source material relevant to all aspects of demography. Review of Population Reviews, published 4 times a year, are annotated bibliographies containing summaries of articles that have been published in 83 periodicals in 37 countries. Cited articles are assigned subject-heading descriptors from the Population Multilingual Thesaurus. Major computerized information resources are: DOCPAL, DOCPOP, EBIS/POPFILE, MANPINS, POPLINE and POPULATION BIBLIOGRAPHY. DOCPAL was established to assist Latin Ameran countries in the collection, storage, processing and retrieval of population documents about Latin America. DOCPAL contains over 19,000 bibliographic citations. DOCPOP was established as the 1st Latin American national computerized population documentation system for Brazilian material. POPLINE is a computerized retrieval service cooperatively produced in the US which covers the worldwide literature on population and family planning. POPULATION BIBLIOGRAPHY consists of bibliographic records of the Carolina Population Center Library at the University of North Carolina. EBIS/PROFILE provides computerized literature search services using improved information processing techniques. The system enables interactive information retrieval using a combination of subject descriptors, free text, author names and words in other fields and can be utilized to generate various lists. MANPINS is a cooperative network of 28 population and other libraries in Peninsular Malaysia. Its data bank includes contributions from member libraries in the form of bibliographic information on monographs and journal articles.

Abstracting/Annotating. ERIC Processing Manual, Section VI.

ERIC Educational Resources Information Center

Brandhorst, Ted, Ed.

Rules and guidelines are provided for the preparation of abstracts and annotations for documents and journal articles entering the ERIC database. Various types of abstracts are defined, including the Informative, Indicative, and mixed Informative-Indicative. Advice is given on how to select the abstract type appropriate for the particular…

Intellectuals in China: Annotations.

ERIC Educational Resources Information Center

Parker, Franklin

This annotated bibliography of 72 books, journal articles, government reports, and newspaper feature stories focuses on the changing role of intellectuals in China, primarily since the 1949 Chinese Revolution. Particular attention is given to the Hundred Flowers Movement of 1957 and the Cultural Revolution. Most of the cited works are in English,…

Productivity: A Selected, Annotated Bibliography, 1976-78.

ERIC Educational Resources Information Center

Brand, Horst, Comp.; Belitsky, Harvey A., Comp.

This selective bibliography provides annotated references for 1,200 books and articles published between 1976 and 1978 which concern productivity--the relation between physical output and input. Publications deal with concepts and methods; measurement of levels and trends; the sources of productivity change (such as technology and research); the…

Environment and the Community: An Annotated Bibliography.

ERIC Educational Resources Information Center

Department of Housing and Urban Development, Washington, DC.

Three hundred and nine citations of books, reports, and articles dating from 1964 to 1971 are included in this annotated bibliography, intended as a selection tool for concerned citizens, architects, builders, and city planners emphasizing the environment of American cities and communities. It is topically arranged into sixteen broad sections with…

Annual Editions: Early Childhood Education 06/07

ERIC Educational Resources Information Center

Paciorek, Karen Menke, Ed.

2006-01-01

This 27th edition of "Annual Editions: Early Childhood Education" provides convenient, inexpensive access to current articles selected from the best of the public press. Organizational features include: an annotated listing of selected World Wide Web sites; an annotated table of contents; a topic guide; a general introduction; brief overviews for…

Selected Annotated Bibliography of Deaf-Blind Prevocational Training Literature.

ERIC Educational Resources Information Center

Stoddard, Denis W.; Glazer, Jamie

Presented is an annotated bibliography of 47 documents relating to prevocational training of deaf-blind children. Entries include books, journal articles, conference proceedings, and regional center reports and usually provide information on author, title, source, publication date, and a review (including a brief description of the type and…

Teaching Adult Vocational Education Learners. Annotated and Selected Bibliography. Final Report.

ERIC Educational Resources Information Center

Warner, Larry S.; Humburg, Renae

This selected annotated bibliography contains eighty-three entries (includes books, reports, guides, papers, and articles) relevant to teaching adult vocational education learners. The citations are organized alphabetically by author and each one includes some or all of the following: source, title, sponsoring agency, publisher, city, state, date,…

Academic Library Literature, 1981-1984: A Selective, Annotated Bibliography.

ERIC Educational Resources Information Center

Dolak, Frank J.

This annotated bibliography provides citations for selected English language journal articles and books that stress and address general, broad concerns of the academic library. Following citations of two bibliographies, the citations are presented in six general categories: (l) budgeting (12 titles); (2) decision making (9 titles); (3) directing…

Program Evaluation in the Arts. An Annotated Bibliography.

ERIC Educational Resources Information Center

Wildemuth, Barbara M., Comp.; Eichinger, Debra S., Comp.

This 56-item annotated bibliography gives teachers and administrators access to information on the evaluation of school fine arts programs. Based upon a computer search of the Educational Resources Information Center (ERIC) data base, it cites project reports, journal articles, and dissertations published from 1963 to 1976. Citations of elementary…

Supporting Student Differences in Listening Comprehension and Vocabulary Learning with Multimedia Annotations

ERIC Educational Resources Information Center

Jones, Linda C.

2009-01-01

This article describes how effectively multimedia learning environments can assist second language (L2) students of different spatial and verbal abilities with listening comprehension and vocabulary learning. In particular, it explores how written and pictorial annotations interacted with high/low spatial and verbal ability learners and thus…

Personal Assistance Services (PAS): Toward Universal Access to Support. Annotated Bibliography.

ERIC Educational Resources Information Center

Racino, Julie Ann

This annotated bibliography provides approximately 100 summaries and evaluations of documents, published from 1979 to 1995, on personal assistance services (PAS) for individuals with disabilities. Studies and articles were selected for inclusion based upon their capacity to inform the development of PAS models, including conceptual, policy, and…

Resources for Helping Young Children Deal with Death.

ERIC Educational Resources Information Center

Wass, Hannelore

This bibliography contains selected resources (1965-1983) to help parents and teachers assist young children with death-related concerns. Included are materials for adults: an annotated list of books on death (13 citations); a bibliography of articles about children and death from recent literature (50 citations); and an annotated list of…

Collection Evaluation Techniques: A Short, Selective, Practical, Current, Annotated Bibliography, 1990-1998. RUSA Occasional Papers Number 24.

ERIC Educational Resources Information Center

Strohl, Bonnie, Comp.

This bibliography contains annotations of 110 journal articles on topics related to library collection evaluation techniques, including academic library collections, access-vs-ownership, "Books for College Libraries," business collections, the OCLC/AMIGOS Collection Analysis CD, circulation data, citation-checking, collection bias,…

Greeks in Canada (an Annotated Bibliography).

ERIC Educational Resources Information Center

Bombas, Leonidas C.

This bibliography on Greeks in Canada includes annotated references to both published and (mostly) unpublished works. Among the 70 entries (arranged in alphabetical order by author) are articles, reports, papers, and theses that deal either exclusively with or include a separate section on Greeks in the various Canadian provinces. (GC)

Microcomputers and the Media Specialist: An Annotated Bibliography.

ERIC Educational Resources Information Center

Miller, Inabeth

An overview of the literature reflecting the rapid development of interest in microcomputer use in education since 1978 is followed by an annotated bibliography which lists books, articles, and ERIC documents in nine categories. The first section includes materials of general interest--historical background, guides to using computers in the…

Building Blocks. An Annotated Bibliography for Single Parent Programming.

ERIC Educational Resources Information Center

Wiley-Thomas, Cheryl, Comp.; Norden, Tamara, Ed.

This booklet lists 645 books, articles, curriculum materials, computer software, and videos that educational professionals can use to develop programs for single parents (especially teen parents). Many of the listings are annotated; all contain information on author, title, publisher name and city, and date of publication or production. The…

Nutrition and Mental Retardation. An Annotated Bibliography, 1964-1970.

ERIC Educational Resources Information Center

Springer, Ninfa Saturnino

This annotated bibliography is primarily organized for nutritionists. It presents selected articles published from 1964 to the present. All aspects of nutrition in mental retardation are covered excepting inborn errors of metabolism. Sections are included on: (1) nutrition, birthweight, and mental retardation; (2) nutrition, growth, and mental…

WORKSHOPS FOR THE HANDICAPPED, AN ANNOTATED BIBLIOGRAPHY--NO. 3.

ERIC Educational Resources Information Center

PERKINS, DOROTHY C.; AND OTHERS

THESE 126 ANNOTATIONS ARE THE THIRD VOLUME OF A CONTINUING SERIES OF BIBLIOGRAPHIES LISTING ARTICLES APPEARING IN JOURNALS AND CONFERENCE, RESEARCH, AND PROJECT REPORTS. LISTINGS INCLUDE TESTS, TEST RESULTS, STAFF TRAINING PROGRAMS, GUIDES FOR COUNSELORS AND TEACHERS, AND ARCHITECTURAL PLANNING, AND RELATE TO THE MENTALLY RETARDED, EMOTIONALLY…

Conflict Resolution and Peace Studies: An Annotated Bibliography. Ethnic Studies Bulletin, Number Nine.

ERIC Educational Resources Information Center

Connecticut Univ., Storrs. Thut (I.N.) World Education Center.

This annotated bibliography of resources dealing with conflict resolution and peace studies was compiled for the use of elementary, secondary, and college educators. The listing is alphabetical by author. Included are handbooks for teachers, course outlines, anthologies of journal articles, bibliographies of curriculum materials, background…

ezTag: tagging biomedical concepts via interactive learning.

PubMed

Kwon, Dongseop; Kim, Sun; Wei, Chih-Hsuan; Leaman, Robert; Lu, Zhiyong

2018-05-18

Recently, advanced text-mining techniques have been shown to speed up manual data curation by providing human annotators with automated pre-annotations generated by rules or machine learning models. Due to the limited training data available, however, current annotation systems primarily focus only on common concept types such as genes or diseases. To support annotating a wide variety of biological concepts with or without pre-existing training data, we developed ezTag, a web-based annotation tool that allows curators to perform annotation and provide training data with humans in the loop. ezTag supports both abstracts in PubMed and full-text articles in PubMed Central. It also provides lexicon-based concept tagging as well as the state-of-the-art pre-trained taggers such as TaggerOne, GNormPlus and tmVar. ezTag is freely available at http://eztag.bioqrator.org.

Aggregating and Predicting Sequence Labels from Crowd Annotations

PubMed Central

Nguyen, An T.; Wallace, Byron C.; Li, Junyi Jessy; Nenkova, Ani; Lease, Matthew

2017-01-01

Despite sequences being core to NLP, scant work has considered how to handle noisy sequence labels from multiple annotators for the same text. Given such annotations, we consider two complementary tasks: (1) aggregating sequential crowd labels to infer a best single set of consensus annotations; and (2) using crowd annotations as training data for a model that can predict sequences in unannotated text. For aggregation, we propose a novel Hidden Markov Model variant. To predict sequences in unannotated text, we propose a neural approach using Long Short Term Memory. We evaluate a suite of methods across two different applications and text genres: Named-Entity Recognition in news articles and Information Extraction from biomedical abstracts. Results show improvement over strong baselines. Our source code and data are available online1. PMID:29093611

Quasars and Active Galaxies: A Reading List.

ERIC Educational Resources Information Center

Fraknoi, Andrew

1988-01-01

Contains the annotated bibliographies of introductory books and sections of books, recent introductory articles, more advanced articles, and more advanced books dealing with quasars and active galaxies. (CW)

Aircraft Wake Vortices - An Annotated Bibliography (1923-1975)

DOT National Transportation Integrated Search

1976-01-01

An annotated bibliography is presented which consists of 570 abstracts of publications on aircraft wake vortices. The material is arranged alphabetically by year of publication and covers the time period through 1975. Experimental and theoretical art...

On the Benefits of Multimodal Annotations for Vocabulary Uptake from Reading

ERIC Educational Resources Information Center

Boers, Frank; Warren, Paul; Grimshaw, Gina; Siyanova-Chanturia, Anna

2017-01-01

Several research articles published in the realm of Computer Assisted Language Learning (CALL) have reported evidence of the benefits of multimodal annotations, i.e. the provision of pictorial as well as verbal clarifications, for vocabulary uptake from reading. Almost invariably, these publications account for the observed benefits with reference…

An Annotated Bibliography of Isotonic Weight-Training Methods.

ERIC Educational Resources Information Center

Wysong, John V.

This literature study was conducted to compare and evaluate various types and techniques of weight lifting so that a weight lifting program could be selected or devised for a secondary school. Annotations of 32 research reports, journal articles, and monographs on isotonic strength training are presented. The literature in the first part of the…

Questionnaires for research: an annotated bibliography on design, construction, and use.

Treesearch

Dale R. Potter; Kathryn M. Sharpe; John C. Hendee; Roger N. Clark

1972-01-01

Questionnaires as social science tools are used increasingly to study people aspects of outdoor recreation and other natural resource fields. An annotated bibliography including subjective evaluations of each article and a keyword list is presented for 193 references to aid researchers and managers in the design, construction, and use of mail questionnaires.

The Place of Grammar in the ESL/EFL Classroom: An Annotated Bibliography.

ERIC Educational Resources Information Center

Kotapish, Carl E.

This annotated bibliography includes citations of journal articles and book chapters that focus on current theories related to teaching grammar in English-as-a-Second-Language and English-as-a-Foreign-Language classrooms. Citations include: (1) "Field Independence-Dependence and the Teaching of Grammar" (R. G. Abraham); (2) "Making…

An Annotated Bibliography of the Gestalt Methods, Techniques, and Therapy

ERIC Educational Resources Information Center

Prewitt-Diaz, Joseph O.

The purpose of this annotated bibliography is to provide the reader with a guide to relevant research in the area of Gestalt therapy, techniques, and methods. The majority of the references are journal articles written within the last 5 years or documents easily obtained through interlibrary loans from local libraries. These references were…

Women, Islam, and Pakistan: A Selected Annotated Bibliography. Fulbright-Hays Summer Seminar Abroad Project.

ERIC Educational Resources Information Center

Phillips, Brenda

This bibliography features selected books, book chapters, research projects, and journal articles, published between 1953 and 1994, about the social, legal, economic, educational political, and professional position of Muslim Pakistani women. Sixteen of the references are annotated. An additional 41 bibliographic references to other materials, not…

Selected Bibliography of Educational Materials: Algeria, Libya, Morocco, Tunisia. Volume 8, Number 2, 1974.

ERIC Educational Resources Information Center

Azzouz, Azzedine; And Others

This bibliography contains 100 English-language annotations of newspaper articles and government publications from four North African nations. Most of the items were published in 1974. Annotations are categorized by topic: philosophy and theory of education, educational level, adult education, teacher training, teaching methods and aids, artistic…

Teaching Diversity and Aging through Active Learning Strategies: An Annotated Bibliography.

ERIC Educational Resources Information Center

Fried, Stephen B.; Mehrotra, Chandra M.

Covering 10 topical areas, this annotated bibliography offers a guide to journal articles, book chapters, monographs, and books useful for teaching diversity and aging through active learning. Active learning experiences may help expand students' awareness of elements of their own diversity, broaden their world view, and enhance their culturally…

Ethical Issues in Social Work. An Annotated Bibliography.

ERIC Educational Resources Information Center

Elliott, Martha W., Comp.

Designed as a practical aid to social work students and practitioners interested in approaching the ethical issues inherent in social work practice, this annotated bibliography lists over 500 books and articles, most of which were published between 1970 and 1983. The bibliography has two main parts, of which the first consists of selections from…

Multi-Cultural Education: Selected Bibliography (Annotated). Research Report, Vol. 10, No. 1.

ERIC Educational Resources Information Center

Louisiana State Univ., Baton Rouge. Bureau of Educational Materials and Research.

This annotated bibliography contains citations of reports, papers, and journal articles in the ERIC data bases and from other sources, on the subject of multicultural education. The references cite works of both theoretical and practical natures. Information on availability of the materials is included in the citation. (JD)

The Human Side of Knowledge Management: An Annotated Bibliography.

ERIC Educational Resources Information Center

Mayer, Pamela S.

This annotated bibliography lists books and articles that have direct application to managing the human side of knowledge acquisition, transfer, and application. What is meant by the human dimension of knowledge is how motivation and learning affect the acquisition and transfer of knowledge and how group dynamics mediate the role of knowledge in…

An Annotated Bibliography of Gay and Lesbian Communication Studies.

ERIC Educational Resources Information Center

Park, Jan Carl

1979-01-01

The 22 entries in this annotated bibliography represent articles that have lesbian women or gay men as subjects and that deal with a specific verbal or nonverbal communication factor. Topics covered in the entries include patterns of self-disclosure in homosexual and heterosexual college students, interpersonal conflict in homosexual relations,…

Hard-Core Unemployment: A Selected, Annotated Bibliography.

ERIC Educational Resources Information Center

Cameron, Colin, Comp.; Menon, Anila Bhatt, Comp.

This annotated bibliography contains references to various films, articles, and books on the subject of hard-core unemployment, and is divided into the following sections: (1) The Sociology of the Hard-Core Milieu, (2) Training Programs, (3) Business and the Hard-Core, (4) Citations of Miscellaneous References on Hard-Core Unemployment, (5)…

Annotated Bibliography on Minority Women in Athletics.

ERIC Educational Resources Information Center

Janis, Laura

The 21 papers and articles annotated for this bibliography are on the topics of: (1) participation of minority women in the Association of Intercollegiate Athletics for Women (AIAW) member institutions; (2) Title IX effects on intercollegiate athletics for minority women; (3) the first "Black Women in Sport Workshop"; (4) black women in sports at…

MONTE CARLO METHODS. A Bibliography covering the Period 1949 to June 1961

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kraft, R.; Wensrich, C.J.

1961-09-11

A partially annotated bibliography is presented containing 508 references to Monte Carlo methods, covering the period from 1947 to June 1961. The references are arranged alphabetically by author. The sources consulted include: Abstracts of Classified Reports; Applied Science and Technology Index; Armed Services Technical Information Agency; Bibliographic Index; Bibliographie der Fremsprachigen Zeitschrifften Literatur; Mathematical Reviews; Nuclear Science Abstracts; and Operations Research, an Annotated Bibliography. (T.F.H.)

Temporal Annotation in the Clinical Domain

PubMed Central

Styler, William F.; Bethard, Steven; Finan, Sean; Palmer, Martha; Pradhan, Sameer; de Groen, Piet C; Erickson, Brad; Miller, Timothy; Lin, Chen; Savova, Guergana; Pustejovsky, James

2014-01-01

This article discusses the requirements of a formal specification for the annotation of temporal information in clinical narratives. We discuss the implementation and extension of ISO-TimeML for annotating a corpus of clinical notes, known as the THYME corpus. To reflect the information task and the heavily inference-based reasoning demands in the domain, a new annotation guideline has been developed, “the THYME Guidelines to ISO-TimeML (THYME-TimeML)”. To clarify what relations merit annotation, we distinguish between linguistically-derived and inferentially-derived temporal orderings in the text. We also apply a top performing TempEval 2013 system against this new resource to measure the difficulty of adapting systems to the clinical domain. The corpus is available to the community and has been proposed for use in a SemEval 2015 task. PMID:29082229

Reliability and type of consumer health documents on the World Wide Web: an annotation study.

PubMed

Martin, Melanie J

2011-01-01

In this paper we present a detailed scheme for annotating medical web pages designed for health care consumers. The annotation is along two axes: first, by reliability (the extent to which the medical information on the page can be trusted), second, by the type of page (patient leaflet, commercial, link, medical article, testimonial, or support). We analyze inter-rater agreement among three judges for each axis. Inter-rater agreement was moderate (0.77 accuracy, 0.62 F-measure, 0.49 Kappa) on the page reliability axis and good (0.81 accuracy, 0.72 F-measure, 0.73 Kappa) along the page type axis. We have shown promising results in this study that appropriate classes of pages can be developed and used by human annotators to annotate web pages with reasonable to good agreement. No.

An annotated bibliography of selected books and articles on benchmarking

DOE Office of Scientific and Technical Information (OSTI.GOV)

Allan, F.C.

This bibliography contains 34 references concerning utilizing benchmarking in the management of businesses. Books and articles are both cited. Methods for gathering and utilizing information are emphasized. (GHH)

An annotated bibliography of selected books and articles on benchmarking

DOE Office of Scientific and Technical Information (OSTI.GOV)

Allan, F.C.

1992-01-01

This bibliography contains 34 references concerning utilizing benchmarking in the management of businesses. Books and articles are both cited. Methods for gathering and utilizing information are emphasized. (GHH)

An Annotated Bibliography of Education for Medical Librarianship, 1940-1968

PubMed Central

Shirley, Sherrilynne

1969-01-01

An attempt has been made in this bibliography to represent the various viewpoints concerning education for medical librarianship equally. The topics covered include: general background reading and readings for those interested in establishing courses in medical librarianship. The former includes annotations on the history and international aspects of the subject. The latter consists of annotations of articles on early courses and present courses in medical librarianship. A final area discussed is the Medical Library Association's Code for the Training and Certification of Medical Librarians. PMID:4898629

Acquisitions List No. 36, April-May 1971.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

The"Acquisitions List" of demographic books and aritcles is issued every two months by the Katharine Dexter McCormick Library. Divided into two parts, the first contains a list of books most recently acquired by the library, each one annotated and also marked with the Library call number. The second part consists of a list of annotated articles,…

Policies and Background Literature for Self-Education on Research Data Management: An Annotated Bibliography

ERIC Educational Resources Information Center

Goben, Abigail; Raszewski, Rebecca

2015-01-01

Librarians navigating research data management self-education have an increasing body of literature to choose from, which may become overwhelming. This annotated bibliography reviews: (1) U.S. federal policies; (2) articles; and (3) books to assist librarians who are self-educating on research data management or are seeking background reading…

Selected Bibliography of Educational Materials: Algeria, Libya, Morocco, Tunisia. Volume 6, Number 2, 1972.

ERIC Educational Resources Information Center

Azzouz, Azzedine; And Others

Annotations of articles, written in English, provide the content for an annotated bibliography of educational materials written in French useful to those with an interest in North Africa. Sections on Algeria, Libya, Morocco, and Tunisia cover topics such as the philosophy and theory of education, educational organization, adult education, teacher…

Annotated Bibliography, Part Two, Final Report for Phase I, Rural Shared Services.

ERIC Educational Resources Information Center

Northern Montana Coll., Havre.

Part Two of a four-part report, designed to identify, evaluate, and synthesize shared services research and development efforts conducted throughout the nation, presents an annotated bibliography of 32 books and 36 articles which describe various attempts to improve rural education. The 68 publications dating from 1958 to 1968 were selected by a…

Steps for Creating a Specialized Corpus and Developing an Annotated Frequency-Based Vocabulary List

ERIC Educational Resources Information Center

Toriida, Marie-Claude

2016-01-01

This article provides introductory, step-by-step explanations of how to make a specialized corpus and an annotated frequency-based vocabulary list. One of my objectives is to help teachers, instructors, program administrators, and graduate students with little experience in this field be able to do so using free resources. Instructions are first…

An Annotated Bibliography of the Literature Dealing with the Incorporation of Right Brain Learning into Left Brain Oriented Schools.

ERIC Educational Resources Information Center

Lewallen, Martha

Articles and documents concerning brain growth and hemispheric specialization, theories of cognitive style, educational implications of brain research, and right-brain learning activities are cited in this annotated bibliography. Citations are preceded by a glossary of terms and followed by a brief review of the assembled literature. Educational…

An Annotated Bibliography: A Review of the Literature on Computer Assisted Writing for the College Developmental Educator.

ERIC Educational Resources Information Center

Huard, Susan D.; Malinowski, Patricia A.

Intended for educators on the postsecondary level, this annotated bibliography lists ERIC documents and relevant articles concerning computer assisted instruction. Specifically, it contains citations on the following subjects: (1) the philosophy behind computer usage, (2) general information to help decide whether to use computers in a writing…

Chemical annotation of small and peptide-like molecules at the Protein Data Bank

PubMed Central

Young, Jasmine Y.; Feng, Zukang; Dimitropoulos, Dimitris; Sala, Raul; Westbrook, John; Zhuravleva, Marina; Shao, Chenghua; Quesada, Martha; Peisach, Ezra; Berman, Helen M.

2013-01-01

Over the past decade, the number of polymers and their complexes with small molecules in the Protein Data Bank archive (PDB) has continued to increase significantly. To support scientific advancements and ensure the best quality and completeness of the data files over the next 10 years and beyond, the Worldwide PDB partnership that manages the PDB archive is developing a new deposition and annotation system. This system focuses on efficient data capture across all supported experimental methods. The new deposition and annotation system is composed of four major modules that together support all of the processing requirements for a PDB entry. In this article, we describe one such module called the Chemical Component Annotation Tool. This tool uses information from both the Chemical Component Dictionary and Biologically Interesting molecule Reference Dictionary to aid in annotation. Benchmark studies have shown that the Chemical Component Annotation Tool provides significant improvements in processing efficiency and data quality. Database URL: http://wwpdb.org PMID:24291661

Chemical annotation of small and peptide-like molecules at the Protein Data Bank.

PubMed

Young, Jasmine Y; Feng, Zukang; Dimitropoulos, Dimitris; Sala, Raul; Westbrook, John; Zhuravleva, Marina; Shao, Chenghua; Quesada, Martha; Peisach, Ezra; Berman, Helen M

2013-01-01

Over the past decade, the number of polymers and their complexes with small molecules in the Protein Data Bank archive (PDB) has continued to increase significantly. To support scientific advancements and ensure the best quality and completeness of the data files over the next 10 years and beyond, the Worldwide PDB partnership that manages the PDB archive is developing a new deposition and annotation system. This system focuses on efficient data capture across all supported experimental methods. The new deposition and annotation system is composed of four major modules that together support all of the processing requirements for a PDB entry. In this article, we describe one such module called the Chemical Component Annotation Tool. This tool uses information from both the Chemical Component Dictionary and Biologically Interesting molecule Reference Dictionary to aid in annotation. Benchmark studies have shown that the Chemical Component Annotation Tool provides significant improvements in processing efficiency and data quality. Database URL: http://wwpdb.org.

Ghostwriting: An Annotated Bibliography.

ERIC Educational Resources Information Center

Simmons, Donald B.

Drawn from communication journals, historical and news magazines, business and industrial magazines, political science and world affairs journals, general interest periodicals, and literary and political review magazines, the approximately 90 entries in this annotated bibliography discuss ghostwriting as practiced through the ages and reveal the…

Visually impaired researchers get their hands on quantum chemistry: application to a computational study on the isomerization of a sterol.

PubMed

Lounnas, Valère; Wedler, Henry B; Newman, Timothy; Schaftenaar, Gijs; Harrison, Jason G; Nepomuceno, Gabriella; Pemberton, Ryan; Tantillo, Dean J; Vriend, Gert

2014-11-01

In molecular sciences, articles tend to revolve around 2D representations of 3D molecules, and sighted scientists often resort to 3D virtual reality software to study these molecules in detail. Blind and visually impaired (BVI) molecular scientists have access to a series of audio devices that can help them read the text in articles and work with computers. Reading articles published in this journal, though, is nearly impossible for them because they need to generate mental 3D images of molecules, but the article-reading software cannot do that for them. We have previously designed AsteriX, a web server that fully automatically decomposes articles, detects 2D plots of low molecular weight molecules, removes meta data and annotations from these plots, and converts them into 3D atomic coordinates. AsteriX-BVI goes one step further and converts the 3D representation into a 3D printable, haptic-enhanced format that includes Braille annotations. These Braille-annotated physical 3D models allow BVI scientists to generate a complete mental model of the molecule. AsteriX-BVI uses Molden to convert the meta data of quantum chemistry experiments into BVI friendly formats so that the entire line of scientific information that sighted people take for granted-from published articles, via printed results of computational chemistry experiments, to 3D models-is now available to BVI scientists too. The possibilities offered by AsteriX-BVI are illustrated by a project on the isomerization of a sterol, executed by the blind co-author of this article (HBW).

Visually impaired researchers get their hands on quantum chemistry: application to a computational study on the isomerization of a sterol

NASA Astrophysics Data System (ADS)

Lounnas, Valère; Wedler, Henry B.; Newman, Timothy; Schaftenaar, Gijs; Harrison, Jason G.; Nepomuceno, Gabriella; Pemberton, Ryan; Tantillo, Dean J.; Vriend, Gert

2014-11-01

In molecular sciences, articles tend to revolve around 2D representations of 3D molecules, and sighted scientists often resort to 3D virtual reality software to study these molecules in detail. Blind and visually impaired (BVI) molecular scientists have access to a series of audio devices that can help them read the text in articles and work with computers. Reading articles published in this journal, though, is nearly impossible for them because they need to generate mental 3D images of molecules, but the article-reading software cannot do that for them. We have previously designed AsteriX, a web server that fully automatically decomposes articles, detects 2D plots of low molecular weight molecules, removes meta data and annotations from these plots, and converts them into 3D atomic coordinates. AsteriX-BVI goes one step further and converts the 3D representation into a 3D printable, haptic-enhanced format that includes Braille annotations. These Braille-annotated physical 3D models allow BVI scientists to generate a complete mental model of the molecule. AsteriX-BVI uses Molden to convert the meta data of quantum chemistry experiments into BVI friendly formats so that the entire line of scientific information that sighted people take for granted—from published articles, via printed results of computational chemistry experiments, to 3D models—is now available to BVI scientists too. The possibilities offered by AsteriX-BVI are illustrated by a project on the isomerization of a sterol, executed by the blind co-author of this article (HBW).

Bovine Genome Database: supporting community annotation and analysis of the Bos taurus genome

PubMed Central

2010-01-01

Background A goal of the Bovine Genome Database (BGD; http://BovineGenome.org) has been to support the Bovine Genome Sequencing and Analysis Consortium (BGSAC) in the annotation and analysis of the bovine genome. We were faced with several challenges, including the need to maintain consistent quality despite diversity in annotation expertise in the research community, the need to maintain consistent data formats, and the need to minimize the potential duplication of annotation effort. With new sequencing technologies allowing many more eukaryotic genomes to be sequenced, the demand for collaborative annotation is likely to increase. Here we present our approach, challenges and solutions facilitating a large distributed annotation project. Results and Discussion BGD has provided annotation tools that supported 147 members of the BGSAC in contributing 3,871 gene models over a fifteen-week period, and these annotations have been integrated into the bovine Official Gene Set. Our approach has been to provide an annotation system, which includes a BLAST site, multiple genome browsers, an annotation portal, and the Apollo Annotation Editor configured to connect directly to our Chado database. In addition to implementing and integrating components of the annotation system, we have performed computational analyses to create gene evidence tracks and a consensus gene set, which can be viewed on individual gene pages at BGD. Conclusions We have provided annotation tools that alleviate challenges associated with distributed annotation. Our system provides a consistent set of data to all annotators and eliminates the need for annotators to format data. Involving the bovine research community in genome annotation has allowed us to leverage expertise in various areas of bovine biology to provide biological insight into the genome sequence. PMID:21092105

Evaluation of web-based annotation of ophthalmic images for multicentric clinical trials.

PubMed

Chalam, K V; Jain, P; Shah, V A; Shah, Gaurav Y

2006-06-01

An Internet browser-based annotation system can be used to identify and describe features in digitalized retinal images, in multicentric clinical trials, in real time. In this web-based annotation system, the user employs a mouse to draw and create annotations on a transparent layer, that encapsulates the observations and interpretations of a specific image. Multiple annotation layers may be overlaid on a single image. These layers may correspond to annotations by different users on the same image or annotations of a temporal sequence of images of a disease process, over a period of time. In addition, geometrical properties of annotated figures may be computed and measured. The annotations are stored in a central repository database on a server, which can be retrieved by multiple users in real time. This system facilitates objective evaluation of digital images and comparison of double-blind readings of digital photographs, with an identifiable audit trail. Annotation of ophthalmic images allowed clinically feasible and useful interpretation to track properties of an area of fundus pathology. This provided an objective method to monitor properties of pathologies over time, an essential component of multicentric clinical trials. The annotation system also allowed users to view stereoscopic images that are stereo pairs. This web-based annotation system is useful and valuable in monitoring patient care, in multicentric clinical trials, telemedicine, teaching and routine clinical settings.

Annotating a "Reader's Digest" Article--'The NEA: A Washington Lobby Run Rampant.'

ERIC Educational Resources Information Center

Methvin, Eugene H.; Herndon, Terry

1979-01-01

The copy of a "Reader's Digest" article critical of the political activities of the National Education Association (NEA) is run with marginal comments written by Terry Herndon, NEA executive director. (IRT)

Challenges for automatically extracting molecular interactions from full-text articles.

PubMed

McIntosh, Tara; Curran, James R

2009-09-24

The increasing availability of full-text biomedical articles will allow more biomedical knowledge to be extracted automatically with greater reliability. However, most Information Retrieval (IR) and Extraction (IE) tools currently process only abstracts. The lack of corpora has limited the development of tools that are capable of exploiting the knowledge in full-text articles. As a result, there has been little investigation into the advantages of full-text document structure, and the challenges developers will face in processing full-text articles. We manually annotated passages from full-text articles that describe interactions summarised in a Molecular Interaction Map (MIM). Our corpus tracks the process of identifying facts to form the MIM summaries and captures any factual dependencies that must be resolved to extract the fact completely. For example, a fact in the results section may require a synonym defined in the introduction. The passages are also annotated with negated and coreference expressions that must be resolved.We describe the guidelines for identifying relevant passages and possible dependencies. The corpus includes 2162 sentences from 78 full-text articles. Our corpus analysis demonstrates the necessity of full-text processing; identifies the article sections where interactions are most commonly stated; and quantifies the proportion of interaction statements requiring coherent dependencies. Further, it allows us to report on the relative importance of identifying synonyms and resolving negated expressions. We also experiment with an oracle sentence retrieval system using the corpus as a gold-standard evaluation set. We introduce the MIM corpus, a unique resource that maps interaction facts in a MIM to annotated passages within full-text articles. It is an invaluable case study providing guidance to developers of biomedical IR and IE systems, and can be used as a gold-standard evaluation set for full-text IR tasks.

Research on College Board Programs and Services: Annotated Bibliography 2013. Research in Review 2013-1

ERIC Educational Resources Information Center

Barry, Carol; Cooney, Siobhan; Laitusis, Vytas; Matos-Elefonte, Haifa; McKillip, Mary; Merriman, Jennifer; Niu, Sunny; Smith, Kara

2013-01-01

This annotated bibliography contains summaries of research studies examining a number of College Board assessments and programs. To be included in the bibliography, each study needed to meet a number of criteria. First, articles must have been published (as a College Board research report, in an external journal, or as an ETS research report).…

Annotated Bibliography of Research in the Teaching of English

ERIC Educational Resources Information Center

Beach, Richard; Brendler, Beth; Dillon, Deborah; Dockter, Jessie; Ernst, Stacy; Frederick, Amy; Galda, Lee; Helman, Lori; Kapoor, Richa; Ngo, Bic; O'Brien, David; Scharber, Cassie; Jorgensen, Karen; Liang, Lauren; Braaksma, Martine; Janssen, Tanja

2010-01-01

This article presents an annotated bibliography of "Research in the Teaching of English" (RTE). The 2010 version of the bibliography involves a major change--the bibliography is available solely as a downloadable pdf file at http://www.ncte.org/journals/rte/issues/v45-2. As the length of the bibliography has grown from 15 pages in 2003 to 88 pages…

An Annotated Bibliography of Current Literature on the Mentoring of Teachers: Collegial Mentoring Promotes Dual Professional Growth.

ERIC Educational Resources Information Center

Harper, Sheryll Lynch

This study reviews current research on teacher mentors. Mentoring is defined as teacher-to-teacher coaching or counseling. The annotated bibliography covers articles that deal with: (1) descriptions and definitions of mentors; (2) mentoring as a vehicle used in teacher induction programs; and (3) the value of mentoring as a staff development tool.…

Individualization and Modularization of Vocational Education Instructional Materials. An Annotated Bibliography of Publications and Projects. Bibliography Series No. 32.

ERIC Educational Resources Information Center

Magisos, Joel H., Comp.; Stakelon, Anne E., Comp.

This annotated bibliography is designed to assist applicants for research grants under part C (section 131a) of the amendments to the Vocational Education Act of 1963 by providing access to documents, journal articles, and current projects related to the individualization and modularization of vocational education instructional materials. The…

Research on College Board Programs and Services: Annotated Bibliography 2012. Research in Review 2012-2

ERIC Educational Resources Information Center

Barry, Carol; Bausmith, Jennifer; Cooney, Siobhan; Laitusis, Vytas; Matos-Elefonte, Haifa; McKillip, Mary; Niu, Sunny; Rawls, Anita

2012-01-01

This annotated bibliography contains summaries of research studies examining a number of College Board assessments and programs. To be included in the bibliography, each study needed to meet a number of criteria. First, articles must have been published (as a College Board research report, in an external journal, or as an ETS research report).…

Annotated Bibliography. Conference Materials: Strategy Conference on Education and the Economy (Washington, D.C., September 22-24, 1981).

ERIC Educational Resources Information Center

Center for Law and Education, Boston, MA.

The 22 items included in a packet distributed to participants at a 1981 conference on education and the economy are listed in this annotated bibliography, with sources for the items identified. The materials include articles, chapters from books, and monographs, as well as a resource guide and bibliography concerning rural economic and community…

Annotating image ROIs with text descriptions for multimodal biomedical document retrieval

NASA Astrophysics Data System (ADS)

You, Daekeun; Simpson, Matthew; Antani, Sameer; Demner-Fushman, Dina; Thoma, George R.

2013-01-01

Regions of interest (ROIs) that are pointed to by overlaid markers (arrows, asterisks, etc.) in biomedical images are expected to contain more important and relevant information than other regions for biomedical article indexing and retrieval. We have developed several algorithms that localize and extract the ROIs by recognizing markers on images. Cropped ROIs then need to be annotated with contents describing them best. In most cases accurate textual descriptions of the ROIs can be found from figure captions, and these need to be combined with image ROIs for annotation. The annotated ROIs can then be used to, for example, train classifiers that separate ROIs into known categories (medical concepts), or to build visual ontologies, for indexing and retrieval of biomedical articles. We propose an algorithm that pairs visual and textual ROIs that are extracted from images and figure captions, respectively. This algorithm based on dynamic time warping (DTW) clusters recognized pointers into groups, each of which contains pointers with identical visual properties (shape, size, color, etc.). Then a rule-based matching algorithm finds the best matching group for each textual ROI mention. Our method yields a precision and recall of 96% and 79%, respectively, when ground truth textual ROI data is used.

Legal Information Sources: An Annotated Bibliography.

ERIC Educational Resources Information Center

Conner, Ronald C.

This 25-page annotated bibliography describes the legal reference materials in the special collection of a medium-sized public library. Sources are listed in 12 categories: cases, dictionaries, directories, encyclopedias, forms, references for the lay person, general, indexes, laws and legislation, legal research aids, periodicals, and specialized…

NoGOA: predicting noisy GO annotations using evidences and sparse representation.

PubMed

Yu, Guoxian; Lu, Chang; Wang, Jun

2017-07-21

Gene Ontology (GO) is a community effort to represent functional features of gene products. GO annotations (GOA) provide functional associations between GO terms and gene products. Due to resources limitation, only a small portion of annotations are manually checked by curators, and the others are electronically inferred. Although quality control techniques have been applied to ensure the quality of annotations, the community consistently report that there are still considerable noisy (or incorrect) annotations. Given the wide application of annotations, however, how to identify noisy annotations is an important but yet seldom studied open problem. We introduce a novel approach called NoGOA to predict noisy annotations. NoGOA applies sparse representation on the gene-term association matrix to reduce the impact of noisy annotations, and takes advantage of sparse representation coefficients to measure the semantic similarity between genes. Secondly, it preliminarily predicts noisy annotations of a gene based on aggregated votes from semantic neighborhood genes of that gene. Next, NoGOA estimates the ratio of noisy annotations for each evidence code based on direct annotations in GOA files archived on different periods, and then weights entries of the association matrix via estimated ratios and propagates weights to ancestors of direct annotations using GO hierarchy. Finally, it integrates evidence-weighted association matrix and aggregated votes to predict noisy annotations. Experiments on archived GOA files of six model species (H. sapiens, A. thaliana, S. cerevisiae, G. gallus, B. Taurus and M. musculus) demonstrate that NoGOA achieves significantly better results than other related methods and removing noisy annotations improves the performance of gene function prediction. The comparative study justifies the effectiveness of integrating evidence codes with sparse representation for predicting noisy GO annotations. Codes and datasets are available at http://mlda.swu.edu.cn/codes.php?name=NoGOA .

Mendeley: Creating Communities of Scholarly Inquiry through Research Collaboration

ERIC Educational Resources Information Center

Zaugg, Holt; West, Richard E.; Tateishi, Isaku; Randall, Daniel L.

2010-01-01

Mendeley is a free, web-based tool for organizing research citations and annotating their accompanying PDF articles. Adapting Web 2.0 principles for academic scholarship, Mendeley integrates the management of the research articles with features for collaborating with researchers locally and worldwide. In this article the features of Mendeley are…

Recent International Documents and Journal Articles from the ERIC Database.

ERIC Educational Resources Information Center

International Journal of Early Years Education, 1998

1998-01-01

Annotates recent international documents and journal articles from the ERIC database. Document topics include racial equality, and balancing early childhood education and work. Journal article topics include foster care in Iraqi Kurdistan; child care in Sweden; teacher-child interaction in Australian centers; teacher education in Brazil, Iceland,…

Short-Term Memory; An Annotated Bibliography. Supplement 1.

ERIC Educational Resources Information Center

Fisher, Dennis F.

A compilation of 165 references dealing with short term memory, this bibliography supplements "Short-Term Memory: An Annotated Bibliography" (August 1968). The time period covered is predominantly June 1968 to June 1969. Such aspects and topics as psychometrics, motivation, human engineering, vision, auditory perception, verbal and nonverbal…

Research in child and adolescent psychiatry in India

PubMed Central

Shastri, Priyavadan Chandrakant; Shastri, Jay P.; Shastri, Dimple

2010-01-01

The primary source for this annotation on child and adolescent psychiatry is Indian Journal of Psychiatry. Articles covering various dimensions of child and adolescent mental health were searched from its electronic data base to discuss relevant articles. Literature was mainly in the form of original research articles, review articles, case reports, editorials, orations and presidential address. PMID:21836681

An annotated bibliography of completed and in-progress behavioral research for the Office of Buildings and Community Systems. [About 1000 items, usually with abstracts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weijo, R.O.; Roberson, B.F.; Eckert, R.

This report provides an annotated bibliography of completed and in-progress consumer decision research useful for technology transfer and commercialization planning by the US Department of Energy's (DOE) Office of Buildings and Community Systems (OBCS). This report attempts to integrate the consumer research studies conducted across several public and private organizations over the last four to five years. Some of the sources of studies included in this annotated bibliography are DOE National Laboratories, public and private utilities, trade associations, states, and nonprofit organizations. This study divides the articles identified in this annotated bibliography into sections that are consistent with or similarmore » to the system of organization used by OBCS.« less

Smoking: The Health Consequences of Tobacco Use. An Annotated Bibliography with Analytical Introduction. Science and Social Responsibility Series, No. 2.

ERIC Educational Resources Information Center

Schmitz, Cecilia M.; Gray, Richard A.

This volume contains an extensive introduction to the health consequences of tobacco use and extended annotations of the most important English-language monographs and articles to appear on the subject in the 1980s and 1990s arranged in classified order under select headings. The introductory analytical essay by Richard A. Gray covers: early and…

Video Annotation Software Application for Thorough Collaborative Assessment of and Feedback on Microteaching Lessons in Geography Education

ERIC Educational Resources Information Center

van der Westhuizen, Christo P.; Golightly, Aubrey

2015-01-01

This article discusses the process and findings of a study in which video annotation (VideoANT) and a learning management system (LMS) were implemented together in the microteaching lessons of fourth-year geography student teachers. The aim was to ensure adequate assessment of and feedback for each student, since these aspects are, in general, a…

Data mart construction based on semantic annotation of scientific articles: A case study for the prioritization of drug targets.

PubMed

Teixeira, Marlon Amaro Coelho; Belloze, Kele Teixeira; Cavalcanti, Maria Cláudia; Silva-Junior, Floriano P

2018-04-01

Semantic text annotation enables the association of semantic information (ontology concepts) to text expressions (terms), which are readable by software agents. In the scientific scenario, this is particularly useful because it reveals a lot of scientific discoveries that are hidden within academic articles. The Biomedical area has more than 300 ontologies, most of them composed of over 500 concepts. These ontologies can be used to annotate scientific papers and thus, facilitate data extraction. However, in the context of a scientific research, a simple keyword-based query using the interface of a digital scientific texts library can return more than a thousand hits. The analysis of such a large set of texts, annotated with such numerous and large ontologies, is not an easy task. Therefore, the main objective of this work is to provide a method that could facilitate this task. This work describes a method called Text and Ontology ETL (TOETL), to build an analytical view over such texts. First, a corpus of selected papers is semantically annotated using distinct ontologies. Then, the annotation data is extracted, organized and aggregated into the dimensional schema of a data mart. Besides the TOETL method, this work illustrates its application through the development of the TaP DM (Target Prioritization data mart). This data mart has focus on the research of gene essentiality, a key concept to be considered when searching for genes showing potential as anti-infective drug targets. This work reveals that the proposed approach is a relevant tool to support decision making in the prioritization of new drug targets, being more efficient than the keyword-based traditional tools. Copyright © 2018 Elsevier B.V. All rights reserved.

Selected Survey of Educational Law and Policy Literature.

ERIC Educational Resources Information Center

Piele, Philip K., Comp.

1983-01-01

Annotations from three issues of "Current Index to Journals in Education" were selected on the basis of anticipated reader interest. Articles dealing with elementary and secondary education organized by subjects are followed by articles dealing with postsecondary education. (MLF)

Active learning-based information structure analysis of full scientific articles and two applications for biomedical literature review.

PubMed

Guo, Yufan; Silins, Ilona; Stenius, Ulla; Korhonen, Anna

2013-06-01

Techniques that are capable of automatically analyzing the information structure of scientific articles could be highly useful for improving information access to biomedical literature. However, most existing approaches rely on supervised machine learning (ML) and substantial labeled data that are expensive to develop and apply to different sub-fields of biomedicine. Recent research shows that minimal supervision is sufficient for fairly accurate information structure analysis of biomedical abstracts. However, is it realistic for full articles given their high linguistic and informational complexity? We introduce and release a novel corpus of 50 biomedical articles annotated according to the Argumentative Zoning (AZ) scheme, and investigate active learning with one of the most widely used ML models-Support Vector Machines (SVM)-on this corpus. Additionally, we introduce two novel applications that use AZ to support real-life literature review in biomedicine via question answering and summarization. We show that active learning with SVM trained on 500 labeled sentences (6% of the corpus) performs surprisingly well with the accuracy of 82%, just 2% lower than fully supervised learning. In our question answering task, biomedical researchers find relevant information significantly faster from AZ-annotated than unannotated articles. In the summarization task, sentences extracted from particular zones are significantly more similar to gold standard summaries than those extracted from particular sections of full articles. These results demonstrate that active learning of full articles' information structure is indeed realistic and the accuracy is high enough to support real-life literature review in biomedicine. The annotated corpus, our AZ classifier and the two novel applications are available at http://www.cl.cam.ac.uk/yg244/12bioinfo.html

Reading Teachers and Their Students (ERIC/RCS).

ERIC Educational Resources Information Center

Sensenbaugh, Roger

1992-01-01

Presents annotations of nine articles from the ERIC database that discuss the pedagogical relationship between reading teachers and their students. Includes articles that deal with whole-language instruction, student motivation, instructional grouping, questioning techniques, and the characteristics of effective teachers. (PRA)

Carroll County Competency Based Teacher Certification Project. Librarian's Report.

ERIC Educational Resources Information Center

Coker, Homer; Coker, Joan G.

Reference materials, slides, cassettes, books, pamphlets, materials from other states, and articles used in the Carroll County, Georgia, Competency Based Teacher Certification Project, 1973-74, are listed. Brief annotations are included for both the reference materials and articles. (MJM)

Knowledge Representation and Management. From Ontology to Annotation. Findings from the Yearbook 2015 Section on Knowledge Representation and Management.

PubMed

Charlet, J; Darmoni, S J

2015-08-13

To summarize the best papers in the field of Knowledge Representation and Management (KRM). A comprehensive review of medical informatics literature was performed to select some of the most interesting papers of KRM published in 2014. Four articles were selected, two focused on annotation and information retrieval using an ontology. The two others focused mainly on ontologies, one dealing with the usage of a temporal ontology in order to analyze the content of narrative document, one describing a methodology for building multilingual ontologies. Semantic models began to show their efficiency, coupled with annotation tools.

Ontology modularization to improve semantic medical image annotation.

PubMed

Wennerberg, Pinar; Schulz, Klaus; Buitelaar, Paul

2011-02-01

Searching for medical images and patient reports is a significant challenge in a clinical setting. The contents of such documents are often not described in sufficient detail thus making it difficult to utilize the inherent wealth of information contained within them. Semantic image annotation addresses this problem by describing the contents of images and reports using medical ontologies. Medical images and patient reports are then linked to each other through common annotations. Subsequently, search algorithms can more effectively find related sets of documents on the basis of these semantic descriptions. A prerequisite to realizing such a semantic search engine is that the data contained within should have been previously annotated with concepts from medical ontologies. One major challenge in this regard is the size and complexity of medical ontologies as annotation sources. Manual annotation is particularly time consuming labor intensive in a clinical environment. In this article we propose an approach to reducing the size of clinical ontologies for more efficient manual image and text annotation. More precisely, our goal is to identify smaller fragments of a large anatomy ontology that are relevant for annotating medical images from patients suffering from lymphoma. Our work is in the area of ontology modularization, which is a recent and active field of research. We describe our approach, methods and data set in detail and we discuss our results. Copyright © 2010 Elsevier Inc. All rights reserved.

The Africa Collection: An Annotated Historical Resource Bibliography for the Student of Africa.

ERIC Educational Resources Information Center

Lynn, Karen

This annotated bibliographic collection of resources on Africa including non-fiction, fiction, texts, poetry, draft papers, addresses, periodicals, film, records, and travel agencies is designed to aid secondary students and their teachers interested in research on Africa. An instructional approach is taken, drawing upon examples to demonstrate…

Metadata and annotations for multi-scale electrophysiological data.

PubMed

Bower, Mark R; Stead, Matt; Brinkmann, Benjamin H; Dufendach, Kevin; Worrell, Gregory A

2009-01-01

The increasing use of high-frequency (kHz), long-duration (days) intracranial monitoring from multiple electrodes during pre-surgical evaluation for epilepsy produces large amounts of data that are challenging to store and maintain. Descriptive metadata and clinical annotations of these large data sets also pose challenges to simple, often manual, methods of data analysis. The problems of reliable communication of metadata and annotations between programs, the maintenance of the meanings within that information over long time periods, and the flexibility to re-sort data for analysis place differing demands on data structures and algorithms. Solutions to these individual problem domains (communication, storage and analysis) can be configured to provide easy translation and clarity across the domains. The Multi-scale Annotation Format (MAF) provides an integrated metadata and annotation environment that maximizes code reuse, minimizes error probability and encourages future changes by reducing the tendency to over-fit information technology solutions to current problems. An example of a graphical utility for generating and evaluating metadata and annotations for "big data" files is presented.

Green Zines: A List of Alternative Environmental Periodicals.

ERIC Educational Resources Information Center

Dodge, Christopher

1992-01-01

Presents an annotated list of 200 alternative environmental periodicals. The list's scope includes animal welfare, vegetarianism, sustainable agriculture, conservation, renewable energy, and antinuclear activism. (MDH)

Minority Access to Professional Education: A Selected Bibliography.

ERIC Educational Resources Information Center

New York State Education Dept., Albany. Office of Higher and Professional Education.

An annotated bibliography of more than 200 entries on minority access to professional education covers journal articles, professional association publications, institutional program and research reports, government documents, congressional hearings, conference proceedings, law review articles, and government agency reports. Citations, dated 1969…

Children and Advertising: A Bibliography.

ERIC Educational Resources Information Center

Council of Better Business Bureaus, Inc., New York, NY. Clearinghouse for Research on Children's Advertising.

More than 600 entries are contained in this annotated bibliography of materials concerning the effects of television advertising on children. Entries are alphabetized by author and are divided into the following categories: special interest articles; general interest articles; books and pamphlets; government publications; transcripts of oral…

Astronomical Resources: Supernovae.

ERIC Educational Resources Information Center

Fraknoi, Andrew

1987-01-01

Contains a partially annotated, nontechnical bibliography of recent materials about supernovae, including some about the discovery of a supernova in the Large Magellanic Cloud. Includes citations of general books and articles about supernovae, articles about Supernova 1987A, and a few science fiction stories using supernovae. (TW)

Information Literacy Assessment

ERIC Educational Resources Information Center

Warmkessel, Marjorie M.

2007-01-01

This article presents an annotated list of seven recent articles on the topic of information literacy assessment. They include: (1) "The Three Arenas of Information Literacy Assessment" (Bonnie Gratch Lindauer); (2) "Testing the Effectiveness of Interactive Multimedia for Library-User Education" (Karen Markey et al.); (3)…

Database citation in full text biomedical articles.

PubMed

Kafkas, Şenay; Kim, Jee-Hyub; McEntyre, Johanna R

2013-01-01

Molecular biology and literature databases represent essential infrastructure for life science research. Effective integration of these data resources requires that there are structured cross-references at the level of individual articles and biological records. Here, we describe the current patterns of how database entries are cited in research articles, based on analysis of the full text Open Access articles available from Europe PMC. Focusing on citation of entries in the European Nucleotide Archive (ENA), UniProt and Protein Data Bank, Europe (PDBe), we demonstrate that text mining doubles the number of structured annotations of database record citations supplied in journal articles by publishers. Many thousands of new literature-database relationships are found by text mining, since these relationships are also not present in the set of articles cited by database records. We recommend that structured annotation of database records in articles is extended to other databases, such as ArrayExpress and Pfam, entries from which are also cited widely in the literature. The very high precision and high-throughput of this text-mining pipeline makes this activity possible both accurately and at low cost, which will allow the development of new integrated data services.

Database Citation in Full Text Biomedical Articles

PubMed Central

Kafkas, Şenay; Kim, Jee-Hyub; McEntyre, Johanna R.

2013-01-01

Molecular biology and literature databases represent essential infrastructure for life science research. Effective integration of these data resources requires that there are structured cross-references at the level of individual articles and biological records. Here, we describe the current patterns of how database entries are cited in research articles, based on analysis of the full text Open Access articles available from Europe PMC. Focusing on citation of entries in the European Nucleotide Archive (ENA), UniProt and Protein Data Bank, Europe (PDBe), we demonstrate that text mining doubles the number of structured annotations of database record citations supplied in journal articles by publishers. Many thousands of new literature-database relationships are found by text mining, since these relationships are also not present in the set of articles cited by database records. We recommend that structured annotation of database records in articles is extended to other databases, such as ArrayExpress and Pfam, entries from which are also cited widely in the literature. The very high precision and high-throughput of this text-mining pipeline makes this activity possible both accurately and at low cost, which will allow the development of new integrated data services. PMID:23734176

Automated extraction of chemical structure information from digital raster images

PubMed Central

Park, Jungkap; Rosania, Gus R; Shedden, Kerby A; Nguyen, Mandee; Lyu, Naesung; Saitou, Kazuhiro

2009-01-01

Background To search for chemical structures in research articles, diagrams or text representing molecules need to be translated to a standard chemical file format compatible with cheminformatic search engines. Nevertheless, chemical information contained in research articles is often referenced as analog diagrams of chemical structures embedded in digital raster images. To automate analog-to-digital conversion of chemical structure diagrams in scientific research articles, several software systems have been developed. But their algorithmic performance and utility in cheminformatic research have not been investigated. Results This paper aims to provide critical reviews for these systems and also report our recent development of ChemReader – a fully automated tool for extracting chemical structure diagrams in research articles and converting them into standard, searchable chemical file formats. Basic algorithms for recognizing lines and letters representing bonds and atoms in chemical structure diagrams can be independently run in sequence from a graphical user interface-and the algorithm parameters can be readily changed-to facilitate additional development specifically tailored to a chemical database annotation scheme. Compared with existing software programs such as OSRA, Kekule, and CLiDE, our results indicate that ChemReader outperforms other software systems on several sets of sample images from diverse sources in terms of the rate of correct outputs and the accuracy on extracting molecular substructure patterns. Conclusion The availability of ChemReader as a cheminformatic tool for extracting chemical structure information from digital raster images allows research and development groups to enrich their chemical structure databases by annotating the entries with published research articles. Based on its stable performance and high accuracy, ChemReader may be sufficiently accurate for annotating the chemical database with links to scientific research articles. PMID:19196483

Elucidating high-dimensional cancer hallmark annotation via enriched ontology.

PubMed

Yan, Shankai; Wong, Ka-Chun

2017-09-01

Cancer hallmark annotation is a promising technique that could discover novel knowledge about cancer from the biomedical literature. The automated annotation of cancer hallmarks could reveal relevant cancer transformation processes in the literature or extract the articles that correspond to the cancer hallmark of interest. It acts as a complementary approach that can retrieve knowledge from massive text information, advancing numerous focused studies in cancer research. Nonetheless, the high-dimensional nature of cancer hallmark annotation imposes a unique challenge. To address the curse of dimensionality, we compared multiple cancer hallmark annotation methods on 1580 PubMed abstracts. Based on the insights, a novel approach, UDT-RF, which makes use of ontological features is proposed. It expands the feature space via the Medical Subject Headings (MeSH) ontology graph and utilizes novel feature selections for elucidating the high-dimensional cancer hallmark annotation space. To demonstrate its effectiveness, state-of-the-art methods are compared and evaluated by a multitude of performance metrics, revealing the full performance spectrum on the full set of cancer hallmarks. Several case studies are conducted, demonstrating how the proposed approach could reveal novel insights into cancers. https://github.com/cskyan/chmannot. Copyright © 2017 Elsevier Inc. All rights reserved.

MicroScope: a platform for microbial genome annotation and comparative genomics

PubMed Central

Vallenet, D.; Engelen, S.; Mornico, D.; Cruveiller, S.; Fleury, L.; Lajus, A.; Rouy, Z.; Roche, D.; Salvignol, G.; Scarpelli, C.; Médigue, C.

2009-01-01

The initial outcome of genome sequencing is the creation of long text strings written in a four letter alphabet. The role of in silico sequence analysis is to assist biologists in the act of associating biological knowledge with these sequences, allowing investigators to make inferences and predictions that can be tested experimentally. A wide variety of software is available to the scientific community, and can be used to identify genomic objects, before predicting their biological functions. However, only a limited number of biologically interesting features can be revealed from an isolated sequence. Comparative genomics tools, on the other hand, by bringing together the information contained in numerous genomes simultaneously, allow annotators to make inferences based on the idea that evolution and natural selection are central to the definition of all biological processes. We have developed the MicroScope platform in order to offer a web-based framework for the systematic and efficient revision of microbial genome annotation and comparative analysis (http://www.genoscope.cns.fr/agc/microscope). Starting with the description of the flow chart of the annotation processes implemented in the MicroScope pipeline, and the development of traditional and novel microbial annotation and comparative analysis tools, this article emphasizes the essential role of expert annotation as a complement of automatic annotation. Several examples illustrate the use of implemented tools for the review and curation of annotations of both new and publicly available microbial genomes within MicroScope’s rich integrated genome framework. The platform is used as a viewer in order to browse updated annotation information of available microbial genomes (more than 440 organisms to date), and in the context of new annotation projects (117 bacterial genomes). The human expertise gathered in the MicroScope database (about 280,000 independent annotations) contributes to improve the quality of microbial genome annotation, especially for genomes initially analyzed by automatic procedures alone. Database URLs: http://www.genoscope.cns.fr/agc/mage and http://www.genoscope.cns.fr/agc/microcyc PMID:20157493

MicroScope: a platform for microbial genome annotation and comparative genomics.

PubMed

Vallenet, D; Engelen, S; Mornico, D; Cruveiller, S; Fleury, L; Lajus, A; Rouy, Z; Roche, D; Salvignol, G; Scarpelli, C; Médigue, C

2009-01-01

The initial outcome of genome sequencing is the creation of long text strings written in a four letter alphabet. The role of in silico sequence analysis is to assist biologists in the act of associating biological knowledge with these sequences, allowing investigators to make inferences and predictions that can be tested experimentally. A wide variety of software is available to the scientific community, and can be used to identify genomic objects, before predicting their biological functions. However, only a limited number of biologically interesting features can be revealed from an isolated sequence. Comparative genomics tools, on the other hand, by bringing together the information contained in numerous genomes simultaneously, allow annotators to make inferences based on the idea that evolution and natural selection are central to the definition of all biological processes. We have developed the MicroScope platform in order to offer a web-based framework for the systematic and efficient revision of microbial genome annotation and comparative analysis (http://www.genoscope.cns.fr/agc/microscope). Starting with the description of the flow chart of the annotation processes implemented in the MicroScope pipeline, and the development of traditional and novel microbial annotation and comparative analysis tools, this article emphasizes the essential role of expert annotation as a complement of automatic annotation. Several examples illustrate the use of implemented tools for the review and curation of annotations of both new and publicly available microbial genomes within MicroScope's rich integrated genome framework. The platform is used as a viewer in order to browse updated annotation information of available microbial genomes (more than 440 organisms to date), and in the context of new annotation projects (117 bacterial genomes). The human expertise gathered in the MicroScope database (about 280,000 independent annotations) contributes to improve the quality of microbial genome annotation, especially for genomes initially analyzed by automatic procedures alone.Database URLs: http://www.genoscope.cns.fr/agc/mage and http://www.genoscope.cns.fr/agc/microcyc.

Annotated Bibliography: Afro-American, Hispano and Amerind; with Amerinc; with Audio-Visual Materials List.

ERIC Educational Resources Information Center

Haberbosch, John F.; And Others

Readings and audiovisual materials, selected especially for educators, related to the study of Afro-American, Hispano-American, and American Indian cultures are included in this 366-item annotated bibliography covering the period from 1861 to 1968. Historical, cultural, and biographical materials are included for each of the three cultures as well…

Mass Communication in Indonesia: An Annotated Bibliography. Asian Mass Communication Bibliography Series 10.

ERIC Educational Resources Information Center

Prakoso, Mastini Hardjo, Comp.

As the first attempt to provide a comprehensive list covering the multidisciplinary fields of mass communication in Asia, this bibliography was assembled over a two-year period by compilers in ten Asian countries and represents all of the academic areas relevant to communication. Accompanied by short descriptive annotations (except where the…

An Annotated Bibliography of Accelerated Learning

ERIC Educational Resources Information Center

Garcia, GNA

2007-01-01

A rich narrative-style bibliography of accelerated learning (reviewing six articles published between 1995-2003). Articles reviewed include: (1) Accelerative learning and the Emerging Science of Wholeness (D. D. Beale); (2) Effective Teaching in Accelerated Learning Programs (D. Boyd); (3) A Critical Theory Perspective on Accelerated Learning (S.…

An Annotated Bibliography of Concept Mapping

ERIC Educational Resources Information Center

Garcia, GNA

2008-01-01

A rich narrative-style bibliography of concept mapping (reviewing six articles published between 1992-2005). Articles reviewed include: (1) Cognitive mapping: A qualitative research method for social work (C. Bitoni); (2) Collaborative concept mapping: Provoking and supporting meaningful discourse (C. Boxtel, J. Linden, E. Roelofs, and G. Erkens);…

Special Education in High School Redesign

ERIC Educational Resources Information Center

National High School Center, 2011

2011-01-01

This annotated bibliography, co-authored by the National High School Center and the National Secondary Transition Technical Assistance Center, identifies articles that address high school redesign as it relates to students with disabilities and special education's role in such initiatives. The articles are organized around the National High School…

New directions in biomedical text annotation: definitions, guidelines and corpus construction

PubMed Central

Wilbur, W John; Rzhetsky, Andrey; Shatkay, Hagit

2006-01-01

Background While biomedical text mining is emerging as an important research area, practical results have proven difficult to achieve. We believe that an important first step towards more accurate text-mining lies in the ability to identify and characterize text that satisfies various types of information needs. We report here the results of our inquiry into properties of scientific text that have sufficient generality to transcend the confines of a narrow subject area, while supporting practical mining of text for factual information. Our ultimate goal is to annotate a significant corpus of biomedical text and train machine learning methods to automatically categorize such text along certain dimensions that we have defined. Results We have identified five qualitative dimensions that we believe characterize a broad range of scientific sentences, and are therefore useful for supporting a general approach to text-mining: focus, polarity, certainty, evidence, and directionality. We define these dimensions and describe the guidelines we have developed for annotating text with regard to them. To examine the effectiveness of the guidelines, twelve annotators independently annotated the same set of 101 sentences that were randomly selected from current biomedical periodicals. Analysis of these annotations shows 70–80% inter-annotator agreement, suggesting that our guidelines indeed present a well-defined, executable and reproducible task. Conclusion We present our guidelines defining a text annotation task, along with annotation results from multiple independently produced annotations, demonstrating the feasibility of the task. The annotation of a very large corpus of documents along these guidelines is currently ongoing. These annotations form the basis for the categorization of text along multiple dimensions, to support viable text mining for experimental results, methodology statements, and other forms of information. We are currently developing machine learning methods, to be trained and tested on the annotated corpus, that would allow for the automatic categorization of biomedical text along the general dimensions that we have presented. The guidelines in full detail, along with annotated examples, are publicly available. PMID:16867190

Annotated bibliography for the humpback chub (Gila cypha) with emphasis on the Grand Canyon population.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Goulet, C. T.; LaGory, K. E.; Environmental Science Division

2009-10-05

Glen Canyon Dam is a hydroelectric facility located on the Colorado River in Arizona that is operated by the U.S. Bureau of Reclamation (Reclamation) for multiple purposes including water storage, flood control, power generation, recreation, and enhancement of fish and wildlife. Glen Canyon Dam operations have been managed for the last several years to improve conditions for the humpback chub (Gila cypha) and other ecosystem components. An extensive amount of literature has been produced on the humpback chub. We developed this annotated bibliography to assist managers and researchers in the Grand Canyon as they perform assessments, refine management strategies, andmore » develop new studies to examine the factors affecting humpback chub. The U.S. Geological Survey recently created a multispecies bibliography (including references on the humpback chub) entitled Bibliography of Native Colorado River Big Fishes (available at www.fort.usgs.gov/Products/data/COFishBib). That bibliography, while quite extensive and broader in scope than ours, is not annotated, and, therefore, does not provide any of the information in the original literature. In developing this annotated bibliography, we have attempted to assemble abstracts from relevant published literature. We present here abstracts taken unmodified from individual reports and articles except where noted. The bibliography spans references from 1976 to 2009 and is organized in five broad topical areas, including: (1) biology, (2) ecology, (3) impacts of dam operations, (4) other impacts, and (5) conservation and management, and includes twenty subcategories. Within each subcategory, we present abstracts alphabetically by author and chronologically by year. We present relevant articles not specific to either the humpback chub or Glen Canyon Dam, but cited in other included reports, under the Supporting Articles subcategory. We provide all citations in alphabetical order in Section 7.« less

Systematic analysis of snake neurotoxins' functional classification using a data warehousing approach.

PubMed

Siew, Joyce Phui Yee; Khan, Asif M; Tan, Paul T J; Koh, Judice L Y; Seah, Seng Hong; Koo, Chuay Yeng; Chai, Siaw Ching; Armugam, Arunmozhiarasi; Brusic, Vladimir; Jeyaseelan, Kandiah

2004-12-12

Sequence annotations, functional and structural data on snake venom neurotoxins (svNTXs) are scattered across multiple databases and literature sources. Sequence annotations and structural data are available in the public molecular databases, while functional data are almost exclusively available in the published articles. There is a need for a specialized svNTXs database that contains NTX entries, which are organized, well annotated and classified in a systematic manner. We have systematically analyzed svNTXs and classified them using structure-function groups based on their structural, functional and phylogenetic properties. Using conserved motifs in each phylogenetic group, we built an intelligent module for the prediction of structural and functional properties of unknown NTXs. We also developed an annotation tool to aid the functional prediction of newly identified NTXs as an additional resource for the venom research community. We created a searchable online database of NTX proteins sequences (http://research.i2r.a-star.edu.sg/Templar/DB/snake_neurotoxin). This database can also be found under Swiss-Prot Toxin Annotation Project website (http://www.expasy.org/sprot/).

Virus-PLoc: a fusion classifier for predicting the subcellular localization of viral proteins within host and virus-infected cells.

PubMed

Shen, Hong-Bin; Chou, Kuo-Chen

2007-02-15

Viruses can reproduce their progenies only within a host cell, and their actions depend both on its destructive tendencies toward a specific host cell and on environmental conditions. Therefore, knowledge of the subcellular localization of viral proteins in a host cell or virus-infected cell is very useful for in-depth studying of their functions and mechanisms as well as designing antiviral drugs. An analysis on the Swiss-Prot database (version 50.0, released on May 30, 2006) indicates that only 23.5% of viral protein entries are annotated for their subcellular locations in this regard. As for the gene ontology database, the corresponding percentage is 23.8%. Such a gap calls for the development of high throughput tools for timely annotating the localization of viral proteins within host and virus-infected cells. In this article, a predictor called "Virus-PLoc" has been developed that is featured by fusing many basic classifiers with each engineered according to the K-nearest neighbor rule. The overall jackknife success rate obtained by Virus-PLoc in identifying the subcellular compartments of viral proteins was 80% for a benchmark dataset in which none of proteins has more than 25% sequence identity to any other in a same location site. Virus-PLoc will be freely available as a web-server at http://202.120.37.186/bioinf/virus for the public usage. Furthermore, Virus-PLoc has been used to provide large-scale predictions of all viral protein entries in Swiss-Prot database that do not have subcellular location annotations or are annotated as being uncertain. The results thus obtained have been deposited in a downloadable file prepared with Microsoft Excel and named "Tab_Virus-PLoc.xls." This file is available at the same website and will be updated twice a year to include the new entries of viral proteins and reflect the continuous development of Virus-PLoc. 2006 Wiley Periodicals, Inc.

Annotated bibliography of structural equation modelling: technical work.

PubMed

Austin, J T; Wolfle, L M

1991-05-01

Researchers must be familiar with a variety of source literature to facilitate the informed use of structural equation modelling. Knowledge can be acquired through the study of an expanding literature found in a diverse set of publishing forums. We propose that structural equation modelling publications can be roughly classified into two groups: (a) technical and (b) substantive applications. Technical materials focus on the procedures rather than substantive conclusions derived from applications. The focus of this article is the former category; included are foundational/major contributions, minor contributions, critical and evaluative reviews, integrations, simulations and computer applications, precursor and historical material, and pedagogical textbooks. After a brief introduction, we annotate 294 articles in the technical category dating back to Sewall Wright (1921).

SABER: The Searchable Annotated Bibliography of Education Research in Astronomy

NASA Astrophysics Data System (ADS)

Bruning, David H.; Bailey, J. M.; Brissenden, G.

2006-12-01

Starting a new research project in astronomy education is hard because the literature is scattered throughout many journals. Relevant astronomy education research may be in psychology journals, science education journals, physics education journals, or even in science journals themselves. Tracking the vast realm of literature is difficult, especially since libraries do not carry many of these journals and related abstracting services. SABER is an online resource (http://astronomy.uwp.edu/saber/) that was started in 2001 specifically to reduce this “scatter” by compiling into one place an annotated bibliography of relevant education research articles. The database now includes more than 150 articles specifically addressing astronomy education research. Visit SABER and see what it can do for you.

NeuroTransDB: highly curated and structured transcriptomic metadata for neurodegenerative diseases.

PubMed

Bagewadi, Shweta; Adhikari, Subash; Dhrangadhariya, Anjani; Irin, Afroza Khanam; Ebeling, Christian; Namasivayam, Aishwarya Alex; Page, Matthew; Hofmann-Apitius, Martin; Senger, Philipp

2015-01-01

Neurodegenerative diseases are chronic debilitating conditions, characterized by progressive loss of neurons that represent a significant health care burden as the global elderly population continues to grow. Over the past decade, high-throughput technologies such as the Affymetrix GeneChip microarrays have provided new perspectives into the pathomechanisms underlying neurodegeneration. Public transcriptomic data repositories, namely Gene Expression Omnibus and curated ArrayExpress, enable researchers to conduct integrative meta-analysis; increasing the power to detect differentially regulated genes in disease and explore patterns of gene dysregulation across biologically related studies. The reliability of retrospective, large-scale integrative analyses depends on an appropriate combination of related datasets, in turn requiring detailed meta-annotations capturing the experimental setup. In most cases, we observe huge variation in compliance to defined standards for submitted metadata in public databases. Much of the information to complete, or refine meta-annotations are distributed in the associated publications. For example, tissue preparation or comorbidity information is frequently described in an article's supplementary tables. Several value-added databases have employed additional manual efforts to overcome this limitation. However, none of these databases explicate annotations that distinguish human and animal models in neurodegeneration context. Therefore, adopting a more specific disease focus, in combination with dedicated disease ontologies, will better empower the selection of comparable studies with refined annotations to address the research question at hand. In this article, we describe the detailed development of NeuroTransDB, a manually curated database containing metadata annotations for neurodegenerative studies. The database contains more than 20 dimensions of metadata annotations within 31 mouse, 5 rat and 45 human studies, defined in collaboration with domain disease experts. We elucidate the step-by-step guidelines used to critically prioritize studies from public archives and their metadata curation and discuss the key challenges encountered. Curated metadata for Alzheimer's disease gene expression studies are available for download. Database URL: www.scai.fraunhofer.de/NeuroTransDB.html. © The Author(s) 2015. Published by Oxford University Press.

An Annotated Bibliography of Selected Projects, Theses, and Dissertations on the American Indian by Arizona State University Students from 1943-1974.

ERIC Educational Resources Information Center

Mech, Joyce, Comp.

Fifty-five published projects, theses, and dissertations dealing with the Native American and written by Arizona State University students are listed in this annotated bibliography. Arranged alphabetically according to authors and topics, the publications cover the period from 1943 to 1974. Topics include: (1) attitudes/achievement, (2)…

Articles on Mass Communication in U.S. and Foreign Journals.

ERIC Educational Resources Information Center

McKerns, Joseph P.; And Others, Eds.

1984-01-01

Annotates a number of journal articles dealing with a variety of subjects, including (1) advertising, (2) audience and communicatory analysis, (3) broadcasting, (4) communication theory, (5) courts and the law, (6) media criticism, (7) editorial policy and methods, (8) journalism education, (9) government and media, and (10) technology. (FL)

Ontology Enabled Annotation and Knowledge Management for Collaborative Learning in Virtual Learning Community

ERIC Educational Resources Information Center

Yang, Stephen J. H.; Chen, Irene Ya-Ling; Shao, Norman W. Y.

2004-01-01

The nature of collaborative learning involves intensive interactions among collaborators, such as articulating knowledge into written, verbal or symbolic forms, authoring articles or posting messages to this community's discussion forum, responding or adding comments to messages or articles posted by others, etc. Knowledge collaborators'…

Partnering with Families through Photo Collages

ERIC Educational Resources Information Center

Bacigalupa, Chiara

2016-01-01

This article describes the implementation and benefits of a photo-based family communication method called Daily Explorations. Daily Explorations are one- to two-page photo collages that are annotated with meaningful explanations of children's play and e-mailed to parents every day. The process, described in more detail in this article, is a…

Confluent/Humanistic/Affective Education: A Set of Bibliographies.

ERIC Educational Resources Information Center

Tolliver, J. Howard

Over 250 journal articles, ERIC documents, dissertations, and books dealing with confluent, humanistic, and affective education are listed in this annotated bibliography. Journal articles comprise those published since 1975. Other earlier works listed are considered of major importance in the field. The resources are listed under five categories:…

Selected Survey of Educational Law and Policy Literature.

ERIC Educational Resources Information Center

Piele, Philip K., Ed.

1983-01-01

Annotations from the April, May, and June 1983 issues of the "Current Index to Journals in Education" were selected on the basis of anticipated interest of readers of this journal. Articles dealing with elementary and secondary education are listed first, followed by articles dealing with postsecondary education. (MLF)

Resources for Underwater Robotics Education

ERIC Educational Resources Information Center

Wallace, Michael L.; Freitas, William M.

2016-01-01

4-H clubs can build and program underwater robots from raw materials. An annotated resource list for engaging youth in building underwater remotely operated vehicles (ROVs) is provided. This article is a companion piece to the Research in Brief article "Building Teen Futures with Underwater Robotics" in this issue of the "Journal of…

Parent Resources Inventory.

ERIC Educational Resources Information Center

Alberta Dept. of Education, Edmonton. Early Childhood Services.

This resource inventory is for the use of parent groups and others who are concerned with the provision of parent education and suppport services. There are two parts to the inventory. Section 1 contains the titles of articles and standard bibliographic information, as well as annotations of contents. Copies of the articles are available through…

Crowdtruth validation: a new paradigm for validating algorithms that rely on image correspondences.

PubMed

Maier-Hein, Lena; Kondermann, Daniel; Roß, Tobias; Mersmann, Sven; Heim, Eric; Bodenstedt, Sebastian; Kenngott, Hannes Götz; Sanchez, Alexandro; Wagner, Martin; Preukschas, Anas; Wekerle, Anna-Laura; Helfert, Stefanie; März, Keno; Mehrabi, Arianeb; Speidel, Stefanie; Stock, Christian

2015-08-01

Feature tracking and 3D surface reconstruction are key enabling techniques to computer-assisted minimally invasive surgery. One of the major bottlenecks related to training and validation of new algorithms is the lack of large amounts of annotated images that fully capture the wide range of anatomical/scene variance in clinical practice. To address this issue, we propose a novel approach to obtaining large numbers of high-quality reference image annotations at low cost in an extremely short period of time. The concept is based on outsourcing the correspondence search to a crowd of anonymous users from an online community (crowdsourcing) and comprises four stages: (1) feature detection, (2) correspondence search via crowdsourcing, (3) merging multiple annotations per feature by fitting Gaussian finite mixture models, (4) outlier removal using the result of the clustering as input for a second annotation task. On average, 10,000 annotations were obtained within 24 h at a cost of $100. The annotation of the crowd after clustering and before outlier removal was of expert quality with a median distance of about 1 pixel to a publically available reference annotation. The threshold for the outlier removal task directly determines the maximum annotation error, but also the number of points removed. Our concept is a novel and effective method for fast, low-cost and highly accurate correspondence generation that could be adapted to various other applications related to large-scale data annotation in medical image computing and computer-assisted interventions.

GFam: a platform for automatic annotation of gene families.

PubMed

Sasidharan, Rajkumar; Nepusz, Tamás; Swarbreck, David; Huala, Eva; Paccanaro, Alberto

2012-10-01

We have developed GFam, a platform for automatic annotation of gene/protein families. GFam provides a framework for genome initiatives and model organism resources to build domain-based families, derive meaningful functional labels and offers a seamless approach to propagate functional annotation across periodic genome updates. GFam is a hybrid approach that uses a greedy algorithm to chain component domains from InterPro annotation provided by its 12 member resources followed by a sequence-based connected component analysis of un-annotated sequence regions to derive consensus domain architecture for each sequence and subsequently generate families based on common architectures. Our integrated approach increases sequence coverage by 7.2 percentage points and residue coverage by 14.6 percentage points higher than the coverage relative to the best single-constituent database within InterPro for the proteome of Arabidopsis. The true power of GFam lies in maximizing annotation provided by the different InterPro data sources that offer resource-specific coverage for different regions of a sequence. GFam's capability to capture higher sequence and residue coverage can be useful for genome annotation, comparative genomics and functional studies. GFam is a general-purpose software and can be used for any collection of protein sequences. The software is open source and can be obtained from http://www.paccanarolab.org/software/gfam/.

Internet Connections.

ERIC Educational Resources Information Center

Lindroth, Linda K.

1996-01-01

Annotates 16 World Wide Web (WWW) sites dealing with math and science education matters covered in feature articles for this journal issue. Topics include math fairs, classroom restructuring, and hands-on science. (JW)

Definite Article Usage across Varieties of English

ERIC Educational Resources Information Center

Wahid, Ridwan

2013-01-01

This paper seeks to explore the extent of definite article usage variation in several varieties of English based on a classification of its usage types. An annotation scheme based on Hawkins and Prince was developed for this purpose. Using matching corpus data representing Inner Circle varieties and Outer Circle varieties, analysis was made on…

Focus on Firearms. Biblio Alert! New Resources for Preventing Injury and Violence.

ERIC Educational Resources Information Center

National Center for Education in Maternal and Child Health, Arlington, VA.

This annotated bibliography provides information on important resources on firearm injuries. It is divided into two sections: (1) New Resources, including journal articles (28 titles), reports and books (15 titles), other resources (13 titles), and popular press (3 titles); and (2) Classics, including journal articles (10 titles), reports and…

Quantum Computing: Selected Internet Resources for Librarians, Researchers, and the Casually Curious

ERIC Educational Resources Information Center

Cirasella, Jill

2009-01-01

This article presents an annotated selection of the most important and informative Internet resources for learning about quantum computing, finding quantum computing literature, and tracking quantum computing news. All of the quantum computing resources described in this article are freely available, English-language web sites that fall into one…

Rural Health Abstracts and Citations 1980-1987. Part II: Indian Health Care.

ERIC Educational Resources Information Center

North Dakota Univ., Grand Forks. Center for Rural Health.

Over 300 articles concerning rural health as it pertains to American Indians and Alaska Natives are cited in this bibliography. Most of the articles were published between 1980 and 1988. Abstracts are reprinted verbatim and the bibliography is organized into sections by subject matter. Within each section, annotated citations are listed…

Hemispheric Specialization and Learning Style Theory: Some Considerations for the Elementary Teacher.

ERIC Educational Resources Information Center

Johnson, Susan A.

A literature review was conducted to identify factors in recent brain research related to the needs of elementary school students and to provide a comprehensive list of strategies from which teachers may choose to improve the "brain compatibility" of their classrooms. Annotations of 65 articles are provided. Articles are arranged…

Computers in Composition: A Bibliography of Research and Practice.

ERIC Educational Resources Information Center

Lansing, Margaret L.

Designed to help classroom teachers discover how to use computers effectively in teaching writing, this annotated bibliography contains citations of articles that have appeared in education journals, books, and the ERIC system. Among the topics covered in the more than 50 articles cited are the following: (1) feedback programs for individualized…

JCE Resources for Chemistry and Art.

ERIC Educational Resources Information Center

Jacobsen, Erica K.

2001-01-01

Includes an annotated bibliography of articles featured in this journal on art, dyes, glass, pottery and ceramics, interdisciplinary courses in art and chemistry, light and color, metalwork, and music. (YDS)

A web-based video annotation system for crowdsourcing surveillance videos

NASA Astrophysics Data System (ADS)

Gadgil, Neeraj J.; Tahboub, Khalid; Kirsh, David; Delp, Edward J.

2014-03-01

Video surveillance systems are of a great value to prevent threats and identify/investigate criminal activities. Manual analysis of a huge amount of video data from several cameras over a long period of time often becomes impracticable. The use of automatic detection methods can be challenging when the video contains many objects with complex motion and occlusions. Crowdsourcing has been proposed as an effective method for utilizing human intelligence to perform several tasks. Our system provides a platform for the annotation of surveillance video in an organized and controlled way. One can monitor a surveillance system using a set of tools such as training modules, roles and labels, task management. This system can be used in a real-time streaming mode to detect any potential threats or as an investigative tool to analyze past events. Annotators can annotate video contents assigned to them for suspicious activity or criminal acts. First responders are then able to view the collective annotations and receive email alerts about a newly reported incident. They can also keep track of the annotators' training performance, manage their activities and reward their success. By providing this system, the process of video analysis is made more efficient.

Desiderata for ontologies to be used in semantic annotation of biomedical documents.

PubMed

Bada, Michael; Hunter, Lawrence

2011-02-01

A wealth of knowledge valuable to the translational research scientist is contained within the vast biomedical literature, but this knowledge is typically in the form of natural language. Sophisticated natural-language-processing systems are needed to translate text into unambiguous formal representations grounded in high-quality consensus ontologies, and these systems in turn rely on gold-standard corpora of annotated documents for training and testing. To this end, we are constructing the Colorado Richly Annotated Full-Text (CRAFT) Corpus, a collection of 97 full-text biomedical journal articles that are being manually annotated with the entire sets of terms from select vocabularies, predominantly from the Open Biomedical Ontologies (OBO) library. Our efforts in building this corpus has illuminated infelicities of these ontologies with respect to the semantic annotation of biomedical documents, and we propose desiderata whose implementation could substantially improve their utility in this task; these include the integration of overlapping terms across OBOs, the resolution of OBO-specific ambiguities, the integration of the BFO with the OBOs and the use of mid-level ontologies, the inclusion of noncanonical instances, and the expansion of relations and realizable entities. Copyright © 2010 Elsevier Inc. All rights reserved.

Automatic extraction of angiogenesis bioprocess from text

PubMed Central

Wang, Xinglong; McKendrick, Iain; Barrett, Ian; Dix, Ian; French, Tim; Tsujii, Jun'ichi; Ananiadou, Sophia

2011-01-01

Motivation: Understanding key biological processes (bioprocesses) and their relationships with constituent biological entities and pharmaceutical agents is crucial for drug design and discovery. One way to harvest such information is searching the literature. However, bioprocesses are difficult to capture because they may occur in text in a variety of textual expressions. Moreover, a bioprocess is often composed of a series of bioevents, where a bioevent denotes changes to one or a group of cells involved in the bioprocess. Such bioevents are often used to refer to bioprocesses in text, which current techniques, relying solely on specialized lexicons, struggle to find. Results: This article presents a range of methods for finding bioprocess terms and events. To facilitate the study, we built a gold standard corpus in which terms and events related to angiogenesis, a key biological process of the growth of new blood vessels, were annotated. Statistics of the annotated corpus revealed that over 36% of the text expressions that referred to angiogenesis appeared as events. The proposed methods respectively employed domain-specific vocabularies, a manually annotated corpus and unstructured domain-specific documents. Evaluation results showed that, while a supervised machine-learning model yielded the best precision, recall and F1 scores, the other methods achieved reasonable performance and less cost to develop. Availability: The angiogenesis vocabularies, gold standard corpus, annotation guidelines and software described in this article are available at http://text0.mib.man.ac.uk/~mbassxw2/angiogenesis/ Contact: xinglong.wang@gmail.com PMID:21821664

Economic Aspects of Agricultural Development in Africa. A Selective Annotated Reading List of Reports and Studies Concerning 40 African Countries During the Period 1960 - 1969.

ERIC Educational Resources Information Center

Neville-Rolfe, Edmund, Comp.

Some 1394 research studies from various African countries are annotated in this bibliography, which is divided into 37 country sections with a separate section (Africa General) for studies dealing with the continent as a whole, with geographical regions, or with groups of countries. The publications listed and summarized were published primarily…

SciLite: a platform for displaying text-mined annotations as a means to link research articles with biological data.

PubMed

Venkatesan, Aravind; Kim, Jee-Hyub; Talo, Francesco; Ide-Smith, Michele; Gobeill, Julien; Carter, Jacob; Batista-Navarro, Riza; Ananiadou, Sophia; Ruch, Patrick; McEntyre, Johanna

2016-01-01

The tremendous growth in biological data has resulted in an increase in the number of research papers being published. This presents a great challenge for scientists in searching and assimilating facts described in those papers. Particularly, biological databases depend on curators to add highly precise and useful information that are usually extracted by reading research articles. Therefore, there is an urgent need to find ways to improve linking literature to the underlying data, thereby minimising the effort in browsing content and identifying key biological concepts.   As part of the development of Europe PMC, we have developed a new platform, SciLite, which integrates text-mined annotations from different sources and overlays those outputs on research articles. The aim is to aid researchers and curators using Europe PMC in finding key concepts more easily and provide links to related resources or tools, bridging the gap between literature and biological data.

SciLite: a platform for displaying text-mined annotations as a means to link research articles with biological data

PubMed Central

Talo, Francesco; Ide-Smith, Michele; Gobeill, Julien; Carter, Jacob; Batista-Navarro, Riza; Ananiadou, Sophia; Ruch, Patrick; McEntyre, Johanna

2017-01-01

The tremendous growth in biological data has resulted in an increase in the number of research papers being published. This presents a great challenge for scientists in searching and assimilating facts described in those papers. Particularly, biological databases depend on curators to add highly precise and useful information that are usually extracted by reading research articles. Therefore, there is an urgent need to find ways to improve linking literature to the underlying data, thereby minimising the effort in browsing content and identifying key biological concepts.   As part of the development of Europe PMC, we have developed a new platform, SciLite, which integrates text-mined annotations from different sources and overlays those outputs on research articles. The aim is to aid researchers and curators using Europe PMC in finding key concepts more easily and provide links to related resources or tools, bridging the gap between literature and biological data. PMID:28948232

Triage by ranking to support the curation of protein interactions

PubMed Central

Pasche, Emilie; Gobeill, Julien; Rech de Laval, Valentine; Gleizes, Anne; Michel, Pierre-André; Bairoch, Amos

2017-01-01

Abstract Today, molecular biology databases are the cornerstone of knowledge sharing for life and health sciences. The curation and maintenance of these resources are labour intensive. Although text mining is gaining impetus among curators, its integration in curation workflow has not yet been widely adopted. The Swiss Institute of Bioinformatics Text Mining and CALIPHO groups joined forces to design a new curation support system named nextA5. In this report, we explore the integration of novel triage services to support the curation of two types of biological data: protein–protein interactions (PPIs) and post-translational modifications (PTMs). The recognition of PPIs and PTMs poses a special challenge, as it not only requires the identification of biological entities (proteins or residues), but also that of particular relationships (e.g. binding or position). These relationships cannot be described with onto-terminological descriptors such as the Gene Ontology for molecular functions, which makes the triage task more challenging. Prioritizing papers for these tasks thus requires the development of different approaches. In this report, we propose a new method to prioritize articles containing information specific to PPIs and PTMs. The new resources (RESTful APIs, semantically annotated MEDLINE library) enrich the neXtA5 platform. We tuned the article prioritization model on a set of 100 proteins previously annotated by the CALIPHO group. The effectiveness of the triage service was tested with a dataset of 200 annotated proteins. We defined two sets of descriptors to support automatic triage: the first set to enrich for papers with PPI data, and the second for PTMs. All occurrences of these descriptors were marked-up in MEDLINE and indexed, thus constituting a semantically annotated version of MEDLINE. These annotations were then used to estimate the relevance of a particular article with respect to the chosen annotation type. This relevance score was combined with a local vector-space search engine to generate a ranked list of PMIDs. We also evaluated a query refinement strategy, which adds specific keywords (such as ‘binds’ or ‘interacts’) to the original query. Compared to PubMed, the search effectiveness of the nextA5 triage service is improved by 190% for the prioritization of papers with PPIs information and by 260% for papers with PTMs information. Combining advanced retrieval and query refinement strategies with automatically enriched MEDLINE contents is effective to improve triage in complex curation tasks such as the curation of protein PPIs and PTMs. Database URL: http://candy.hesge.ch/nextA5 PMID:29220432

The UNO Aviation Monograph Series: Aviation Security: An Annotated Bibliography of Responses to the Gore Commission

NASA Technical Reports Server (NTRS)

Carrico, John S.; Schaaf, Michaela M.

1998-01-01

This monograph is a companion to UNOAI Monograph 96-2, "The Image of Airport Security: An Annotated Bibliography," compiled in June 1996. The White House Commission on Aviation Safety and Security, headed by Vice President Al Gore, was formed as a result of the TWA Flight 800 crash in August 1996. The Commission's final report included 31 recommendations addressed toward aviation security. The recommendations were cause for security issues to be revisited in the media and by the aviation industry. These developments necessitated the need for an updated bibliography to review the resulting literature. Many of the articles were written in response to the recommendations made by the Gore Commission. "Aviation Security: An Annotated Bibliography of Responses to the Gore Commission" is the result of this need.

Sonoran Pronghorn Literature: An Annotated Bibliography

USGS Publications Warehouse

Krausman, Paul R.; Morgart, John R.; Harris, Lisa K.; O'Brien, Chantal S.; Cain, James W.; Rosenstock, Steve S.

2005-01-01

EXECUTIVE SUMMARY The Sonoran pronghorn (Antilocapra americana sonoriensis) is 1 of 5 subspecies of pronghorn in North America. Sonoran pronghorn historically ranged from eastern California into southeastern Arizona and south to Sonora, Mexico. Sonoran pronghorn currently inhabit the Sonoran Desert in Southwestern Arizona and northern Sonora, Mexico. Unfortunately, their future in North America is uncertain. In the United States, as of December 2004, there were <51 freeranging individual Sonoran pronghorn. This subspecies has been listed as endangered by the United States Fish and Wildlife Service since 1967. Because of the rapid decline in population size, biologists and managers increased management efforts to reverse the downward spiral to extinction. To assist with enhanced management we have compiled an annotated bibliography of most of the works published on Sonoran pronghorn including peer-reviewed papers (n = 31, including submitted manuscripts), books (n = 26), theses and dissertations (n = 5), conferences, proceedings and symposiums (n = 31), reports (n = 84), abstracts (n = 14), popular articles (n = 41), and others (n = 4). These are the same categories under which we list annotations. Most of the articles involve A. a. sonoriensis. We present the scientific name of other pronghorn when clarification is needed.

A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools

PubMed Central

2012-01-01

Background We introduce the linguistic annotation of a corpus of 97 full-text biomedical publications, known as the Colorado Richly Annotated Full Text (CRAFT) corpus. We further assess the performance of existing tools for performing sentence splitting, tokenization, syntactic parsing, and named entity recognition on this corpus. Results Many biomedical natural language processing systems demonstrated large differences between their previously published results and their performance on the CRAFT corpus when tested with the publicly available models or rule sets. Trainable systems differed widely with respect to their ability to build high-performing models based on this data. Conclusions The finding that some systems were able to train high-performing models based on this corpus is additional evidence, beyond high inter-annotator agreement, that the quality of the CRAFT corpus is high. The overall poor performance of various systems indicates that considerable work needs to be done to enable natural language processing systems to work well when the input is full-text journal articles. The CRAFT corpus provides a valuable resource to the biomedical natural language processing community for evaluation and training of new models for biomedical full text publications. PMID:22901054

Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes.

PubMed

Oellrich, Anika; Collier, Nigel; Smedley, Damian; Groza, Tudor

2015-01-01

Electronic health records and scientific articles possess differing linguistic characteristics that may impact the performance of natural language processing tools developed for one or the other. In this paper, we investigate the performance of four extant concept recognition tools: the clinical Text Analysis and Knowledge Extraction System (cTAKES), the National Center for Biomedical Ontology (NCBO) Annotator, the Biomedical Concept Annotation System (BeCAS) and MetaMap. Each of the four concept recognition systems is applied to four different corpora: the i2b2 corpus of clinical documents, a PubMed corpus of Medline abstracts, a clinical trails corpus and the ShARe/CLEF corpus. In addition, we assess the individual system performances with respect to one gold standard annotation set, available for the ShARe/CLEF corpus. Furthermore, we built a silver standard annotation set from the individual systems' output and assess the quality as well as the contribution of individual systems to the quality of the silver standard. Our results demonstrate that mainly the NCBO annotator and cTAKES contribute to the silver standard corpora (F1-measures in the range of 21% to 74%) and their quality (best F1-measure of 33%), independent from the type of text investigated. While BeCAS and MetaMap can contribute to the precision of silver standard annotations (precision of up to 42%), the F1-measure drops when combined with NCBO Annotator and cTAKES due to a low recall. In conclusion, the performances of individual systems need to be improved independently from the text types, and the leveraging strategies to best take advantage of individual systems' annotations need to be revised. The textual content of the PubMed corpus, accession numbers for the clinical trials corpus, and assigned annotations of the four concept recognition systems as well as the generated silver standard annotation sets are available from http://purl.org/phenotype/resources. The textual content of the ShARe/CLEF (https://sites.google.com/site/shareclefehealth/data) and i2b2 (https://i2b2.org/NLP/DataSets/) corpora needs to be requested with the individual corpus providers.

Public Relations: A Comprehensive Bibliography; Articles and Books on Public Relations, Communication Theory, Public Opinion, and Propaganda, 1964-1972.

ERIC Educational Resources Information Center

Bishop, Robert L., Comp.

This bibliography lists and sometimes annotates approximately 4,000 books, articles, and speeches about or related to public relations. The book contains sections on such subjects as advertising, agriculture, automation, banking, books, business, chemical industry, computers, consumer and consumer relations, corporate image, ecology, education,…

A selected and annotated bibliography of pitch pine (Pinus ridiga Mill.)

Treesearch

Silas Little; Jack McCormick; John W. Andresen; John W. Andresen

1970-01-01

The authors have attempted to include in this bibliography all articles that contain significant original information about pitch pine or that are comprehensive reviews. Secondary sources, such as textbooks that briefly review the literature on specific subjects, are omitted. Articles on local floras are included only if they provide new, revised, or more detailed...

The New Environment-Heredity Controversy: A Selected Annotated Bibliography.

ERIC Educational Resources Information Center

Rosenfield, Geraldine; Yagerman, Howard

The thesis that intelligence is based on heredity was dramatically revived in 1969 by an article in the "Harvard Educational Review" by Arthur Jensen, a psychologist at the University of California at Berkeley. The article, which received wide attention, was sharply criticized by those who hold that it is environment rather than genes which puts…

Sailing: An Introduction to the Wonders of Sailing for Blind and Physically Handicapped Individuals.

ERIC Educational Resources Information Center

Cylke, Frank Kurt, Ed.

This annotated bilbiography of materials focuses on sailing. Two articles are presented in full. They are: "Sailing in Tall Ships" (Tony Elbourn) and "Sailing Blind" (Charles E. Leonard). Each article tells the true story of a blind person's experience with sailing. Material listings are presented for adults under the following…

Management of Disruptive and Off-Task Behaviors: Selected Resources. Bibliographies.

ERIC Educational Resources Information Center

Goss, Sandra Schweighart; Ingersoll, Gary M.

In this collection of annotated references on the subject of classroom management, preference was given to primary research studies or articles about such research, and, with the exception of a few fundamental articles, is limited to studies published in the last decade. Classroom management is defined as the maintenance of on-task behavior or the…

Resources on Law-Related Education: Documents and Journal Articles in ERIC. Yearbook No. 3.

ERIC Educational Resources Information Center

Healy, Langdon T., Ed.; Vontz, Thomas S., Ed.

This ERIC resource is a guide to the array of law-related education (LRE) resources available to teachers. The annotated bibliography offers resources for essential knowledge of the law, innovative teaching methods, and guides to national LRE programs. Included in this collection are abstracts of LRE documents and journal articles, arranged…

Annotated bibliography on artificial recharge of ground water, 1955-67

USGS Publications Warehouse

Signor, Donald C.; Growitz, Douglas J.; Kam, William

1970-01-01

Artificial ground-water recharge has become more important as water use by agriculture, industry, and municipalities increases. Water management agencies are increasingly interested in potential use of recharge for pollution abatement, waste-water disposal, and re-use and reclamation of locally available supplies. Research projects and theoretical analyses of operational recharge systems show increased scientific emphasis on the practice. Overall ground-water basin management systems generally now contain considerations of artificial recharge, whether by direct or indirect methods. Artificial ground-water recharge is a means of conserving surface runoff for future use in places where it would otherwise be lost, of protecting ground-water basins from salt-water encroachment along coastal areas, and of storing and distributing imported water. The biblio-graphy emphasizes technology; however, annotations of articles on waste-water reclamation, ground-water management and ground-water basin management are included. Subjects closely related to artificial recharge, including colloidal flow through porous media, field or laboratory instrumentation, and waste disposal by deep well injection are included where they specifically relate to potential recharge problems. Where almost the same material has been published in several journals, all references are included on the assumption that some publications may be more readily available to interested persons than others. Other publications, especially those of foreign literature, provided abstracts that were used freely as time limitations precluded obtaining and annotating all materials. Abstracts taken from published sources are noted. These are: "Abstracts of North American Geology," U.S. Department of the Interior, Geological Survey; "Abstracts of Recent Published Material on Foil and Water Conservation," ARS-41 series, Agricultural F.esearch Service, U.S. Department of Agriculture; "Water and1 Water Engineering," published by Fuel and Metallurgical Journals, Ltd., London, England; "Journal of Geophysical Research," American Geophysical Union, Washington, D.C.; "American Society of Civil Engineers Transactions," New York; "Selected Bibliography of Hydrology, United Kingdom, for the Years 1955-59," International Association of Scientific Hydrology; "Water Wells, an Annotated Bibliography," California University Water Resources Center Archives Report 13; "Re-use of Effluent in the Future With an Annotated Bibliography," by G. A. Whetstone, Texas Water Development Board Report 8, Austin, Tex.; "Journal of Water Pollution Control Federation," Washington, D.C.; and "A List of Selected Technical References on Artificial Recharge of Ground-Water Reservoirs," compiled by Roy W. Graves, Tulsa University, Information Services Department, Tulsa, Okla. Other notations are self-explanatory, and initials are those of the authors (DCS, DJG, WK). An unpublished compilation of recharge references by Arnon Arad sponsored by the United Nations Educational, Scientific, and Cultural Organization during a training period with the U.S. Geological Survey was also used. The bibliography is arranged alphabetically by author. Where an author has more than one publication, the arrangement is chronological; where an author has more than one publication in a given year, a, b, c, . . . are added. The indexing is by subject and geographic location. Each article was assigned the key words or phrases to best characterize its contents. Units of measure are as they were in the original article; abbreviations retained are generally those in common use such as mg/1 (milligrams per liter), ppm (parts per million), gpm (gallons per minute), km (kilometers), m (meters), cu m per hr (cubic meters p^r hour), cfs (cubic feet per second), me/1 (milliequivalents per liter), psi (pounds per square inch), BOD (biochemical oxygen demand), sq m (square meters), gpd (gallons per day), and mgd (million gallons per day). The bibliography was prepared because of the worldwide interest in the field of artificial recharge and the need for a single source of references to the literature published since 1954. The work is a sequel to the "Annotated Bibliography on Artificial Recharge of Ground Water Through 1954," by D. K. Todd, U.S. Geological Survey Water-Supply Paper 1477, published in 1959.

Backsights : an annotated bibliography.

DOT National Transportation Integrated Search

1986-01-01

With their "popular" orientation, the articles of the series entitled "Backsights" published in the VDH&T Bulletin since December 1972 probably constitute the best comprehensive survey of Virginian transportation history readily available to the publ...

Starting and Operating a Child Care Center. ERIC/EECE Report.

ERIC Educational Resources Information Center

Cesarone, Bernard

2001-01-01

Reviews ERIC documents and journal articles that discuss various issues related to starting, operating, and marketing a child care center. Annotations include center and family care operations. (Author/DLH)

Bio-ontologies: current trends and future directions

PubMed Central

Bodenreider, Olivier; Stevens, Robert

2006-01-01

In recent years, as a knowledge-based discipline, bioinformatics has been made more computationally amenable. After its beginnings as a technology advocated by computer scientists to overcome problems of heterogeneity, ontology has been taken up by biologists themselves as a means to consistently annotate features from genotype to phenotype. In medical informatics, artifacts called ontologies have been used for a longer period of time to produce controlled lexicons for coding schemes. In this article, we review the current position in ontologies and how they have become institutionalized within biomedicine. As the field has matured, the much older philosophical aspects of ontology have come into play. With this and the institutionalization of ontology has come greater formality. We review this trend and what benefits it might bring to ontologies and their use within biomedicine. PMID:16899495

SigReannot-mart: a query environment for expression microarray probe re-annotations.

PubMed

Moreews, François; Rauffet, Gaelle; Dehais, Patrice; Klopp, Christophe

2011-01-01

Expression microarrays are commonly used to study transcriptomes. Most of the arrays are now based on oligo-nucleotide probes. Probe design being a tedious task, it often takes place once at the beginning of the project. The oligo set is then used for several years. During this time period, the knowledge gathered by the community on the genome and the transcriptome increases and gets more precise. Therefore re-annotating the set is essential to supply the biologists with up-to-date annotations. SigReannot-mart is a query environment populated with regularly updated annotations for different oligo sets. It stores the results of the SigReannot pipeline that has mainly been used on farm and aquaculture species. It permits easy extraction in different formats using filters. It is used to compare probe sets on different criteria, to choose the set for a given experiment to mix probe sets in order to create a new one.

neXtA5: accelerating annotation of articles via automated approaches in neXtProt.

PubMed

Mottin, Luc; Gobeill, Julien; Pasche, Emilie; Michel, Pierre-André; Cusin, Isabelle; Gaudet, Pascale; Ruch, Patrick

2016-01-01

The rapid increase in the number of published articles poses a challenge for curated databases to remain up-to-date. To help the scientific community and database curators deal with this issue, we have developed an application, neXtA5, which prioritizes the literature for specific curation requirements. Our system, neXtA5, is a curation service composed of three main elements. The first component is a named-entity recognition module, which annotates MEDLINE over some predefined axes. This report focuses on three axes: Diseases, the Molecular Function and Biological Process sub-ontologies of the Gene Ontology (GO). The automatic annotations are then stored in a local database, BioMed, for each annotation axis. Additional entities such as species and chemical compounds are also identified. The second component is an existing search engine, which retrieves the most relevant MEDLINE records for any given query. The third component uses the content of BioMed to generate an axis-specific ranking, which takes into account the density of named-entities as stored in the Biomed database. The two ranked lists are ultimately merged using a linear combination, which has been specifically tuned to support the annotation of each axis. The fine-tuning of the coefficients is formally reported for each axis-driven search. Compared with PubMed, which is the system used by most curators, the improvement is the following: +231% for Diseases, +236% for Molecular Functions and +3153% for Biological Process when measuring the precision of the top-returned PMID (P0 or mean reciprocal rank). The current search methods significantly improve the search effectiveness of curators for three important curation axes. Further experiments are being performed to extend the curation types, in particular protein-protein interactions, which require specific relationship extraction capabilities. In parallel, user-friendly interfaces powered with a set of JSON web services are currently being implemented into the neXtProt annotation pipeline.Available on: http://babar.unige.ch:8082/neXtA5Database URL: http://babar.unige.ch:8082/neXtA5/fetcher.jsp. © The Author(s) 2016. Published by Oxford University Press.

neXtA5: accelerating annotation of articles via automated approaches in neXtProt

PubMed Central

Mottin, Luc; Gobeill, Julien; Pasche, Emilie; Michel, Pierre-André; Cusin, Isabelle; Gaudet, Pascale; Ruch, Patrick

2016-01-01

The rapid increase in the number of published articles poses a challenge for curated databases to remain up-to-date. To help the scientific community and database curators deal with this issue, we have developed an application, neXtA5, which prioritizes the literature for specific curation requirements. Our system, neXtA5, is a curation service composed of three main elements. The first component is a named-entity recognition module, which annotates MEDLINE over some predefined axes. This report focuses on three axes: Diseases, the Molecular Function and Biological Process sub-ontologies of the Gene Ontology (GO). The automatic annotations are then stored in a local database, BioMed, for each annotation axis. Additional entities such as species and chemical compounds are also identified. The second component is an existing search engine, which retrieves the most relevant MEDLINE records for any given query. The third component uses the content of BioMed to generate an axis-specific ranking, which takes into account the density of named-entities as stored in the Biomed database. The two ranked lists are ultimately merged using a linear combination, which has been specifically tuned to support the annotation of each axis. The fine-tuning of the coefficients is formally reported for each axis-driven search. Compared with PubMed, which is the system used by most curators, the improvement is the following: +231% for Diseases, +236% for Molecular Functions and +3153% for Biological Process when measuring the precision of the top-returned PMID (P0 or mean reciprocal rank). The current search methods significantly improve the search effectiveness of curators for three important curation axes. Further experiments are being performed to extend the curation types, in particular protein–protein interactions, which require specific relationship extraction capabilities. In parallel, user-friendly interfaces powered with a set of JSON web services are currently being implemented into the neXtProt annotation pipeline. Available on: http://babar.unige.ch:8082/neXtA5 Database URL: http://babar.unige.ch:8082/neXtA5/fetcher.jsp PMID:27374119

Transportation Noise Bibliography

DOT National Transportation Integrated Search

1975-07-01

This overview of the scope of current activity provides annotated bibliographic data relating to selections which range from short journal articles to longer research reports and conference proceedings. The items have been selected on the basis of to...

Sources and Information on Transfer Associate Degrees

ERIC Educational Resources Information Center

Ayon, Carlos

2012-01-01

This chapter provides an annotated bibliography of articles about the effects of transfer associate degrees and related statewide transfer and articulation policies. It also provides links to transfer degree legislation in several states.

Methods to Improve Sustainability of a Large Academic Biorepository

PubMed Central

Wiehagen, Luke T.; Schumacher, Philip E.; Dhir, Rajiv

2017-01-01

This article discusses the evolution of the University of Pittsburgh (UPitt) Health Sciences Tissue Bank (HSTB) operation and how it has successfully positioned itself, manages to sustain its value, and remains viable in today's research landscape. We describe the various components of our biobanking operation, which are valued by our researchers, thus leading to sustainability for our biorepository. Operating within the infrastructure of a large academic university, we have access to the most cutting-edge database resources for collecting, tracking, and annotating thousands of specimens. We are constantly improving upon our ability to provide real-time longitudinal follow-up data for our collections, thus providing researchers with valuable, highly annotated research specimens. We believe the combination of all that is described within this article helps to create a biobank that will remain sustainable well into the future. PMID:27860489

SABER: The Searchable Annotated Bibliography of Education Research in Astronomy

NASA Astrophysics Data System (ADS)

Bruning, David; Bailey, Janelle M.; Brissenden, Gina

Starting a new research project can be a challenge, but especially so in education research because the literature is scattered throughout many journals. Relevant astronomy education research may be in psychology journals, science education journals, physics education journals, or even in science journals. Tracking the vast realm of literature is difficult, especially because libraries frequently do not subscribe to many of the relevant journals and abstracting services. The Searchable Annotated Bibliography of Education Research (SABER) is an online resource that was started to service the needs of the astronomy education community, specifically to reduce this "scatter" by compiling an annotated bibliography of education research articles in one electronic location. Although SABER started in 2001, the database has a new URL—http://astronom- y.uwp.edu/saber/—and has recently undergone a major update.

An infrastructure for ontology-based information systems in biomedicine: RICORDO case study.

PubMed

Wimalaratne, Sarala M; Grenon, Pierre; Hoehndorf, Robert; Gkoutos, Georgios V; de Bono, Bernard

2012-02-01

The article presents an infrastructure for supporting the semantic interoperability of biomedical resources based on the management (storing and inference-based querying) of their ontology-based annotations. This infrastructure consists of: (i) a repository to store and query ontology-based annotations; (ii) a knowledge base server with an inference engine to support the storage of and reasoning over ontologies used in the annotation of resources; (iii) a set of applications and services allowing interaction with the integrated repository and knowledge base. The infrastructure is being prototyped and developed and evaluated by the RICORDO project in support of the knowledge management of biomedical resources, including physiology and pharmacology models and associated clinical data. The RICORDO toolkit and its source code are freely available from http://ricordo.eu/relevant-resources. sarala@ebi.ac.uk.

"Enemies of the People": Poetry and Politics in the Time of Stalin.

ERIC Educational Resources Information Center

Morse, David

2001-01-01

Discusses the role of writers in Russia during the period of Joseph Stalin to enlighten issues related to intellectual freedom. Includes an annotated bibliography on "Russian Literature of the Soviet Period," to help students learn more about Russia. (CMK)

Resource Materials for the Creative Curriculum (With Special Articles on Evaluating the Black & Hispanic Image in Children's Books).

ERIC Educational Resources Information Center

Frisby, Deborah

This annotated bibliography of early childhood curriculum materials is divided into two major sections. The first section reviews materials pertaining to house corner, blocks, table toys, art, clay and play dough, water and sand activities. Within these areas, entries are divided into three main lists: books, articles, and children's books. ERIC…

Horses: An Introduction to Horses: Racing, Ranching, and Riding for Blind and Physically Handicapped Individuals.

ERIC Educational Resources Information Center

Cylke, Frank Kurt, Ed.

This annotated bibliography of materials focuses on horses, racing, ranching, and riding. Two articles are presented in full. They are: "Diary of a Blind Horseman: Confidence Springs from a Horse Named Sun" (Richard Vice and Steve Stone) and "Young Rider: Her Horses Show the Way" (Helen Mason). Each article tells the true story…

Closely Reading Informational Texts in the Primary Grades

ERIC Educational Resources Information Center

Fisher, Douglas; Frey, Nancy

2014-01-01

In this article we discuss the differences between close reading in the primary grades and upper elementary grades. We focus on text selection, initial reading. repeated reading, annotation, text-based discussions, and responding to texts.

Mediagraphy: Print and Nonprint Resources.

ERIC Educational Resources Information Center

Educational Media and Technology Yearbook, 1999

1999-01-01

Provides annotated listings for current journals, books, ERIC documents, articles, and nonprint resources in the following categories: artificial intelligence/robotics/electronic performance support systems; computer-assisted instruction; distance education; educational research; educational technology; information science and technology;…

Scholarometer: a social framework for analyzing impact across disciplines.

PubMed

Kaur, Jasleen; Hoang, Diep Thi; Sun, Xiaoling; Possamai, Lino; Jafariasbagh, Mohsen; Patil, Snehal; Menczer, Filippo

2012-01-01

The use of quantitative metrics to gauge the impact of scholarly publications, authors, and disciplines is predicated on the availability of reliable usage and annotation data. Citation and download counts are widely available from digital libraries. However, current annotation systems rely on proprietary labels, refer to journals but not articles or authors, and are manually curated. To address these limitations, we propose a social framework based on crowdsourced annotations of scholars, designed to keep up with the rapidly evolving disciplinary and interdisciplinary landscape. We describe a system called Scholarometer, which provides a service to scholars by computing citation-based impact measures. This creates an incentive for users to provide disciplinary annotations of authors, which in turn can be used to compute disciplinary metrics. We first present the system architecture and several heuristics to deal with noisy bibliographic and annotation data. We report on data sharing and interactive visualization services enabled by Scholarometer. Usage statistics, illustrating the data collected and shared through the framework, suggest that the proposed crowdsourcing approach can be successful. Secondly, we illustrate how the disciplinary bibliometric indicators elicited by Scholarometer allow us to implement for the first time a universal impact measure proposed in the literature. Our evaluation suggests that this metric provides an effective means for comparing scholarly impact across disciplinary boundaries.

Unbiased Taxonomic Annotation of Metagenomic Samples

PubMed Central

Fosso, Bruno; Pesole, Graziano; Rosselló, Francesc

2018-01-01

Abstract The classification of reads from a metagenomic sample using a reference taxonomy is usually based on first mapping the reads to the reference sequences and then classifying each read at a node under the lowest common ancestor of the candidate sequences in the reference taxonomy with the least classification error. However, this taxonomic annotation can be biased by an imbalanced taxonomy and also by the presence of multiple nodes in the taxonomy with the least classification error for a given read. In this article, we show that the Rand index is a better indicator of classification error than the often used area under the receiver operating characteristic (ROC) curve and F-measure for both balanced and imbalanced reference taxonomies, and we also address the second source of bias by reducing the taxonomic annotation problem for a whole metagenomic sample to a set cover problem, for which a logarithmic approximation can be obtained in linear time and an exact solution can be obtained by integer linear programming. Experimental results with a proof-of-concept implementation of the set cover approach to taxonomic annotation in a next release of the TANGO software show that the set cover approach further reduces ambiguity in the taxonomic annotation obtained with TANGO without distorting the relative abundance profile of the metagenomic sample. PMID:29028181

[Prescription annotations in Welfare Pharmacy].

PubMed

Han, Yi

2018-03-01

Welfare Pharmacy contains medical formulas documented by the government and official prescriptions used by the official pharmacy in the pharmaceutical process. In the last years of Southern Song Dynasty, anonyms gave a lot of prescription annotations, made textual researches for the name, source, composition and origin of the prescriptions, and supplemented important historical data of medical cases and researched historical facts. The annotations of Welfare Pharmacy gathered the essence of medical theory, and can be used as precious materials to correctly understand the syndrome differentiation, compatibility regularity and clinical application of prescriptions. This article deeply investigated the style and form of the prescription annotations in Welfare Pharmacy, the name of prescriptions and the evolution of terminology, the major functions of the prescriptions, processing methods, instructions for taking medicine and taboos of prescriptions, the medical cases and clinical efficacy of prescriptions, the backgrounds, sources, composition and cultural meanings of prescriptions, proposed that the prescription annotations played an active role in the textual dissemination, patent medicine production and clinical diagnosis and treatment of Welfare Pharmacy. This not only helps understand the changes in the names and terms of traditional Chinese medicines in Welfare Pharmacy, but also provides the basis for understanding the knowledge sources, compatibility regularity, important drug innovations and clinical medications of prescriptions in Welfare Pharmacy. Copyright© by the Chinese Pharmaceutical Association.

Scholarometer: A Social Framework for Analyzing Impact across Disciplines

PubMed Central

Sun, Xiaoling; Possamai, Lino; JafariAsbagh, Mohsen; Patil, Snehal; Menczer, Filippo

2012-01-01

The use of quantitative metrics to gauge the impact of scholarly publications, authors, and disciplines is predicated on the availability of reliable usage and annotation data. Citation and download counts are widely available from digital libraries. However, current annotation systems rely on proprietary labels, refer to journals but not articles or authors, and are manually curated. To address these limitations, we propose a social framework based on crowdsourced annotations of scholars, designed to keep up with the rapidly evolving disciplinary and interdisciplinary landscape. We describe a system called Scholarometer, which provides a service to scholars by computing citation-based impact measures. This creates an incentive for users to provide disciplinary annotations of authors, which in turn can be used to compute disciplinary metrics. We first present the system architecture and several heuristics to deal with noisy bibliographic and annotation data. We report on data sharing and interactive visualization services enabled by Scholarometer. Usage statistics, illustrating the data collected and shared through the framework, suggest that the proposed crowdsourcing approach can be successful. Secondly, we illustrate how the disciplinary bibliometric indicators elicited by Scholarometer allow us to implement for the first time a universal impact measure proposed in the literature. Our evaluation suggests that this metric provides an effective means for comparing scholarly impact across disciplinary boundaries. PMID:22984414

Manual Gene Ontology annotation workflow at the Mouse Genome Informatics Database.

PubMed

Drabkin, Harold J; Blake, Judith A

2012-01-01

The Mouse Genome Database, the Gene Expression Database and the Mouse Tumor Biology database are integrated components of the Mouse Genome Informatics (MGI) resource (http://www.informatics.jax.org). The MGI system presents both a consensus view and an experimental view of the knowledge concerning the genetics and genomics of the laboratory mouse. From genotype to phenotype, this information resource integrates information about genes, sequences, maps, expression analyses, alleles, strains and mutant phenotypes. Comparative mammalian data are also presented particularly in regards to the use of the mouse as a model for the investigation of molecular and genetic components of human diseases. These data are collected from literature curation as well as downloads of large datasets (SwissProt, LocusLink, etc.). MGI is one of the founding members of the Gene Ontology (GO) and uses the GO for functional annotation of genes. Here, we discuss the workflow associated with manual GO annotation at MGI, from literature collection to display of the annotations. Peer-reviewed literature is collected mostly from a set of journals available electronically. Selected articles are entered into a master bibliography and indexed to one of eight areas of interest such as 'GO' or 'homology' or 'phenotype'. Each article is then either indexed to a gene already contained in the database or funneled through a separate nomenclature database to add genes. The master bibliography and associated indexing provide information for various curator-reports such as 'papers selected for GO that refer to genes with NO GO annotation'. Once indexed, curators who have expertise in appropriate disciplines enter pertinent information. MGI makes use of several controlled vocabularies that ensure uniform data encoding, enable robust analysis and support the construction of complex queries. These vocabularies range from pick-lists to structured vocabularies such as the GO. All data associations are supported with statements of evidence as well as access to source publications.

The annotation-enriched non-redundant patent sequence databases.

PubMed

Li, Weizhong; Kondratowicz, Bartosz; McWilliam, Hamish; Nauche, Stephane; Lopez, Rodrigo

2013-01-01

The EMBL-European Bioinformatics Institute (EMBL-EBI) offers public access to patent sequence data, providing a valuable service to the intellectual property and scientific communities. The non-redundant (NR) patent sequence databases comprise two-level nucleotide and protein sequence clusters (NRNL1, NRNL2, NRPL1 and NRPL2) based on sequence identity (level-1) and patent family (level-2). Annotation from the source entries in these databases is merged and enhanced with additional information from the patent literature and biological context. Corrections in patent publication numbers, kind-codes and patent equivalents significantly improve the data quality. Data are available through various user interfaces including web browser, downloads via FTP, SRS, Dbfetch and EBI-Search. Sequence similarity/homology searches against the databases are available using BLAST, FASTA and PSI-Search. In this article, we describe the data collection and annotation and also outline major changes and improvements introduced since 2009. Apart from data growth, these changes include additional annotation for singleton clusters, the identifier versioning for tracking entry change and the entry mappings between the two-level databases. Database URL: http://www.ebi.ac.uk/patentdata/nr/

The Annotation-enriched non-redundant patent sequence databases

PubMed Central

Li, Weizhong; Kondratowicz, Bartosz; McWilliam, Hamish; Nauche, Stephane; Lopez, Rodrigo

2013-01-01

The EMBL-European Bioinformatics Institute (EMBL-EBI) offers public access to patent sequence data, providing a valuable service to the intellectual property and scientific communities. The non-redundant (NR) patent sequence databases comprise two-level nucleotide and protein sequence clusters (NRNL1, NRNL2, NRPL1 and NRPL2) based on sequence identity (level-1) and patent family (level-2). Annotation from the source entries in these databases is merged and enhanced with additional information from the patent literature and biological context. Corrections in patent publication numbers, kind-codes and patent equivalents significantly improve the data quality. Data are available through various user interfaces including web browser, downloads via FTP, SRS, Dbfetch and EBI-Search. Sequence similarity/homology searches against the databases are available using BLAST, FASTA and PSI-Search. In this article, we describe the data collection and annotation and also outline major changes and improvements introduced since 2009. Apart from data growth, these changes include additional annotation for singleton clusters, the identifier versioning for tracking entry change and the entry mappings between the two-level databases. Database URL: http://www.ebi.ac.uk/patentdata/nr/ PMID:23396323

Perspectives and expectations of drivers : a literature and best practice scan

DOT National Transportation Integrated Search

2002-05-01

Investigators reviewed 160 published reports and interviewed numerous experts. This report includes an annotated bibliography of 84 research articles, an analysis of best practices and recommendations for next steps. The study recommends improvement ...

Natural Disasters and Man-Made Catastrophes

ERIC Educational Resources Information Center

Lonergan, David

2011-01-01

This article categorizes and discusses the kinds of cataclysmic events that threaten the human race and the natural world. A useful set of definitions is provided, and an annotated bibliography of a representative assortment of reference books and monographs.

A review of methodological factors in performance assessments of time-varying aircraft noise effects. [with annotated bibliography

NASA Technical Reports Server (NTRS)

Coates, G. D.; Alluisi, E. A.; Adkins, C. J., Jr.

1977-01-01

Literature on the effects of general noise on human performance is reviewed in an attempt to identify (1) those characteristics of noise that have been found to affect human performance; (2) those characteristics of performance most likely to be affected by the presence of noise, and (3) those characteristics of the performance situation typically associated with noise effects. Based on the characteristics identified, a theoretical framework is proposed that will permit predictions of possible effects of time-varying aircraft-type noise on complex human performance. An annotated bibliography of 50 articles is included.

Human disturbances of waterfowl: An annotated bibliography

USGS Publications Warehouse

Dahlgren, R.B.; Korschgen, C.E.

1992-01-01

The expansion of outdoor recreation greatly increased the interaction between the public, waterfowl, and waterfowl habitat. The effects of these interactions on waterfowl habitats are visible and obvious, whereas the effects of interactions that disrupt the normal behavior of waterfowl are subtle and often overlooked, but perhaps no less harmful than destruction of habitat. Resource managers and administrators require information on the types, magnitude, and effect of disturbances from human contact with wildlife. This bibliography contains annotations for 211 articles with information about effects of human disturbances on waterfowl. Indexes are provided by subject or key words, geographic locations, species of waterfowl, and authors.

Guide to Special Information in Scientific and Engineering Journals.

ERIC Educational Resources Information Center

Harris, Mary Elizabeth

This annotated bibliography lists 203 special features or special issues of science and technology periodicals with emphasis on compilations of information that appear in periodicals on a regular basis. Subjects covered in the guide include aeronautics, air-conditioning and refrigeration engineering, astronomy, automobiles, biology, botany,…

A selected, annotated list of materials that support the development of policies designed to reduce racial and ethnic health disparities

PubMed Central

Donatiello, Joann E.; Droese, Peter W.; Kim, Soo H.

2004-01-01

Research documents the existence of racial and ethnic health disparities. As a result, policy makers are seeking to address these disparities. This list is a starting point for building or updating a collection that supports this policy development process. It is written for health policy librarians and researchers and includes annotated recommendations for books, periodicals, government publications, and Websites. Entries for print publications are primarily from 1998 to 2003. PMID:15098056

Americans' attitudes toward wolves and wolf reintroduction: An annotated bibliography

USGS Publications Warehouse

Browne-Nunez, Christine; Taylor, Jonathan G.

2002-01-01

During the period 1974-2000, 50 reports were published in peer-reviewed journals and in theses and dissertations concerning public altitudes and preferences toward wolves and their reinstatement into previously occupied habitat in the continental U.S. This publication provides annotated synopses of these 50 reports, arranged chronologically, but also cross-referenced by authors and by geographic area. In general, Americans favor reinstatement of wolf populations except for those people who perceive them to be a direct threat to their livelihood.

A selected, annotated list of materials that support the development of policies designed to reduce racial and ethnic health disparities.

PubMed

Donatiello, Joann E; Droese, Peter W; Kim, Soo H

2004-04-01

Research documents the existence of racial and ethnic health disparities. As a result, policy makers are seeking to address these disparities. This list is a starting point for building or updating a collection that supports this policy development process. It is written for health policy librarians and researchers and includes annotated recommendations for books, periodicals, government publications, and Websites. Entries for print publications are primarily from 1998 to 2003.

Construction of an annotated corpus to support biomedical information extraction

PubMed Central

Thompson, Paul; Iqbal, Syed A; McNaught, John; Ananiadou, Sophia

2009-01-01

Background Information Extraction (IE) is a component of text mining that facilitates knowledge discovery by automatically locating instances of interesting biomedical events from huge document collections. As events are usually centred on verbs and nominalised verbs, understanding the syntactic and semantic behaviour of these words is highly important. Corpora annotated with information concerning this behaviour can constitute a valuable resource in the training of IE components and resources. Results We have defined a new scheme for annotating sentence-bound gene regulation events, centred on both verbs and nominalised verbs. For each event instance, all participants (arguments) in the same sentence are identified and assigned a semantic role from a rich set of 13 roles tailored to biomedical research articles, together with a biological concept type linked to the Gene Regulation Ontology. To our knowledge, our scheme is unique within the biomedical field in terms of the range of event arguments identified. Using the scheme, we have created the Gene Regulation Event Corpus (GREC), consisting of 240 MEDLINE abstracts, in which events relating to gene regulation and expression have been annotated by biologists. A novel method of evaluating various different facets of the annotation task showed that average inter-annotator agreement rates fall within the range of 66% - 90%. Conclusion The GREC is a unique resource within the biomedical field, in that it annotates not only core relationships between entities, but also a range of other important details about these relationships, e.g., location, temporal, manner and environmental conditions. As such, it is specifically designed to support bio-specific tool and resource development. It has already been used to acquire semantic frames for inclusion within the BioLexicon (a lexical, terminological resource to aid biomedical text mining). Initial experiments have also shown that the corpus may viably be used to train IE components, such as semantic role labellers. The corpus and annotation guidelines are freely available for academic purposes. PMID:19852798

A semi-supervised learning framework for biomedical event extraction based on hidden topics.

PubMed

Zhou, Deyu; Zhong, Dayou

2015-05-01

Scientists have devoted decades of efforts to understanding the interaction between proteins or RNA production. The information might empower the current knowledge on drug reactions or the development of certain diseases. Nevertheless, due to the lack of explicit structure, literature in life science, one of the most important sources of this information, prevents computer-based systems from accessing. Therefore, biomedical event extraction, automatically acquiring knowledge of molecular events in research articles, has attracted community-wide efforts recently. Most approaches are based on statistical models, requiring large-scale annotated corpora to precisely estimate models' parameters. However, it is usually difficult to obtain in practice. Therefore, employing un-annotated data based on semi-supervised learning for biomedical event extraction is a feasible solution and attracts more interests. In this paper, a semi-supervised learning framework based on hidden topics for biomedical event extraction is presented. In this framework, sentences in the un-annotated corpus are elaborately and automatically assigned with event annotations based on their distances to these sentences in the annotated corpus. More specifically, not only the structures of the sentences, but also the hidden topics embedded in the sentences are used for describing the distance. The sentences and newly assigned event annotations, together with the annotated corpus, are employed for training. Experiments were conducted on the multi-level event extraction corpus, a golden standard corpus. Experimental results show that more than 2.2% improvement on F-score on biomedical event extraction is achieved by the proposed framework when compared to the state-of-the-art approach. The results suggest that by incorporating un-annotated data, the proposed framework indeed improves the performance of the state-of-the-art event extraction system and the similarity between sentences might be precisely described by hidden topics and structures of the sentences. Copyright © 2015 Elsevier B.V. All rights reserved.

Learning Supervised Topic Models for Classification and Regression from Crowds.

PubMed

Rodrigues, Filipe; Lourenco, Mariana; Ribeiro, Bernardete; Pereira, Francisco C

2017-12-01

The growing need to analyze large collections of documents has led to great developments in topic modeling. Since documents are frequently associated with other related variables, such as labels or ratings, much interest has been placed on supervised topic models. However, the nature of most annotation tasks, prone to ambiguity and noise, often with high volumes of documents, deem learning under a single-annotator assumption unrealistic or unpractical for most real-world applications. In this article, we propose two supervised topic models, one for classification and another for regression problems, which account for the heterogeneity and biases among different annotators that are encountered in practice when learning from crowds. We develop an efficient stochastic variational inference algorithm that is able to scale to very large datasets, and we empirically demonstrate the advantages of the proposed model over state-of-the-art approaches.

In the Literature.

ERIC Educational Resources Information Center

Kilpatrick, Thomas L., Ed.

1998-01-01

Provides annotations of 29 journal articles and six book reviews on a variety of topics related to technology in libraries, including collection development, computer-assisted instruction, databases, distance education, ergonomics, hardware, information technology, interlibrary loan and document supply, Internet, online catalogs, preservation,…

Mediagraphy: Print and Nonprint Resources.

ERIC Educational Resources Information Center

Price, Brooke, Ed.

2001-01-01

Lists media-related journals, books, ERIC documents, journal articles, and nonprint resources published in 1999-2000. The annotated entries are classified under the following headings: artificial intelligence; computer assisted instruction; distance education; educational research; educational technology; information science and technology;…

Mediagraphy: Print and Nonprint Resources.

ERIC Educational Resources Information Center

Burdett, Anna E.

2003-01-01

Lists media-related journals, books, ERIC documents, journal articles, and nonprint resources published in 2001-2002. The annotated entries are classified under the following headings: artificial intelligence; computer assisted instruction; distance education; educational research; educational technology; information science and technology;…

Postsecondary Athletics and the Law: A Selected Bibliography.

ERIC Educational Resources Information Center

Edmonds, Edmund P.

1977-01-01

Categories of this annotated list are: General Materials, Books; General Materials, Articles; Organizations; Sex Discrimination and Title IX; The NCAA and the Regulation of Collegiate Sports; Broadcasting; Transnational Sports; Sports Violence; Sports, Law, and Medicine; and Miscellaneous. (AF)

Resource Letter L-1: Lasers.

ERIC Educational Resources Information Center

O'Shea, Donald C.; Peckham, Donald C.

1981-01-01

Following a brief introduction, an annotated listing of literature and teaching aids on lasers is presented. Categories include: Background Materials; Historical References; General References and Textbooks; Specialized References; Reviews; Articles; Films; Laser Courses; Equipment, Demonstrations, and Experiments; Laser Safety; and Lasers and…

A Selective Bibliography on School Materials: Selection and Censorship.

ERIC Educational Resources Information Center

Folke, Carolyn, Comp.

Prepared as a guide for Wisconsin school administrators selecting school instructional materials, this bibliography provides annotations of 57 useful readings on the selection and censorship of school materials. Journal articles, monographs, and ERIC documents are included. (RAA)

Subject/Author Index 1968-1992.

ERIC Educational Resources Information Center

Kupidura, Eva, Ed.; Kupidura, Peter, Ed.

1993-01-01

This 25-year index contains annotations of feature articles by subject and by author. Representative subjects include basic education, development education, empowerment, human rights, lifelong education, peace education, popular education, rural development, social/political action, technological advancement, and transformative research. Articles…

MicroScope-an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data.

PubMed

Médigue, Claudine; Calteau, Alexandra; Cruveiller, Stéphane; Gachet, Mathieu; Gautreau, Guillaume; Josso, Adrien; Lajus, Aurélie; Langlois, Jordan; Pereira, Hugo; Planel, Rémi; Roche, David; Rollin, Johan; Rouy, Zoe; Vallenet, David

2017-09-12

The overwhelming list of new bacterial genomes becoming available on a daily basis makes accurate genome annotation an essential step that ultimately determines the relevance of thousands of genomes stored in public databanks. The MicroScope platform (http://www.genoscope.cns.fr/agc/microscope) is an integrative resource that supports systematic and efficient revision of microbial genome annotation, data management and comparative analysis. Starting from the results of our syntactic, functional and relational annotation pipelines, MicroScope provides an integrated environment for the expert annotation and comparative analysis of prokaryotic genomes. It combines tools and graphical interfaces to analyze genomes and to perform the manual curation of gene function in a comparative genomics and metabolic context. In this article, we describe the free-of-charge MicroScope services for the annotation and analysis of microbial (meta)genomes, transcriptomic and re-sequencing data. Then, the functionalities of the platform are presented in a way providing practical guidance and help to the nonspecialists in bioinformatics. Newly integrated analysis tools (i.e. prediction of virulence and resistance genes in bacterial genomes) and original method recently developed (the pan-genome graph representation) are also described. Integrated environments such as MicroScope clearly contribute, through the user community, to help maintaining accurate resources. © The Author 2017. Published by Oxford University Press.

BreakingNews: Article Annotation by Image and Text Processing.

PubMed

Ramisa, Arnau; Yan, Fei; Moreno-Noguer, Francesc; Mikolajczyk, Krystian

2018-05-01

Building upon recent Deep Neural Network architectures, current approaches lying in the intersection of Computer Vision and Natural Language Processing have achieved unprecedented breakthroughs in tasks like automatic captioning or image retrieval. Most of these learning methods, though, rely on large training sets of images associated with human annotations that specifically describe the visual content. In this paper we propose to go a step further and explore the more complex cases where textual descriptions are loosely related to the images. We focus on the particular domain of news articles in which the textual content often expresses connotative and ambiguous relations that are only suggested but not directly inferred from images. We introduce an adaptive CNN architecture that shares most of the structure for multiple tasks including source detection, article illustration and geolocation of articles. Deep Canonical Correlation Analysis is deployed for article illustration, and a new loss function based on Great Circle Distance is proposed for geolocation. Furthermore, we present BreakingNews, a novel dataset with approximately 100K news articles including images, text and captions, and enriched with heterogeneous meta-data (such as GPS coordinates and user comments). We show this dataset to be appropriate to explore all aforementioned problems, for which we provide a baseline performance using various Deep Learning architectures, and different representations of the textual and visual features. We report very promising results and bring to light several limitations of current state-of-the-art in this kind of domain, which we hope will help spur progress in the field.

Personnel Administration in an Automated Environment.

ERIC Educational Resources Information Center

Leinbach, Philip E.; And Others

1990-01-01

Fourteen articles address issues related to library personnel administration in an automated environment, such as education for automation, salaries, impact of technology, expert systems, core competencies, administrative issues, technology services, job satisfaction, and performance appraisal. A selected annotated bibliography is included. (MES)

The Black Student In Higher Education: A Second Bibliography

ERIC Educational Resources Information Center

Hull, W. Frank, IV; Davies, Marshall W.

1973-01-01

The articles listed in this annotated bibliography are most helpful and revealing of the vast literature focusing on the black student in higher education published since mid-1970. As such, this bibliography updates an earlier one (Hull 1970). (Author)

Current Awareness in Health Education.

ERIC Educational Resources Information Center

Center for Disease Control (DHEW/PHS), Atlanta, GA.

Included in this annotated bibliography on health education are journal articles, monographs, and government reports. Topics covered are patient education, community health education, school health education, sex education, lifestyle, general health education, research and evaluation, smoking, self-care, and other miscellaneous areas. It contains…

Mentoring: A Representative Bibliography.

ERIC Educational Resources Information Center

Norton, Cheryl S.

This annotated bibliography provides a representative sample of the available literature on mentoring. It reviews both qualitative and quantitative research, and covers specific mentoring programs, program implementation, and testimonials to the benefits of mentoring. Materials covered include 40 journal articles, conference papers, books, and…

Student Activities in Secondary Schools: A Bibliography.

ERIC Educational Resources Information Center

Jackson, Michael R., Comp.; And Others

As an aid to school principals, student activities administrators, faculty members, student leaders, instructors at teacher education institutions, and researchers interested in extraclass activities, this annotated bibliography contains hundreds of articles, pamphlets, and books published on secondary students' extracurricular activities.…

Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles.

PubMed

Cohen, K Bretonnel; Lanfranchi, Arrick; Choi, Miji Joo-Young; Bada, Michael; Baumgartner, William A; Panteleyeva, Natalya; Verspoor, Karin; Palmer, Martha; Hunter, Lawrence E

2017-08-17

Coreference resolution is the task of finding strings in text that have the same referent as other strings. Failures of coreference resolution are a common cause of false negatives in information extraction from the scientific literature. In order to better understand the nature of the phenomenon of coreference in biomedical publications and to increase performance on the task, we annotated the Colorado Richly Annotated Full Text (CRAFT) corpus with coreference relations. The corpus was manually annotated with coreference relations, including identity and appositives for all coreferring base noun phrases. The OntoNotes annotation guidelines, with minor adaptations, were used. Interannotator agreement ranges from 0.480 (entity-based CEAF) to 0.858 (Class-B3), depending on the metric that is used to assess it. The resulting corpus adds nearly 30,000 annotations to the previous release of the CRAFT corpus. Differences from related projects include a much broader definition of markables, connection to extensive annotation of several domain-relevant semantic classes, and connection to complete syntactic annotation. Tool performance was benchmarked on the data. A publicly available out-of-the-box, general-domain coreference resolution system achieved an F-measure of 0.14 (B3), while a simple domain-adapted rule-based system achieved an F-measure of 0.42. An ensemble of the two reached F of 0.46. Following the IDENTITY chains in the data would add 106,263 additional named entities in the full 97-paper corpus, for an increase of 76% percent in the semantic classes of the eight ontologies that have been annotated in earlier versions of the CRAFT corpus. The project produced a large data set for further investigation of coreference and coreference resolution in the scientific literature. The work raised issues in the phenomenon of reference in this domain and genre, and the paper proposes that many mentions that would be considered generic in the general domain are not generic in the biomedical domain due to their referents to specific classes in domain-specific ontologies. The comparison of the performance of a publicly available and well-understood coreference resolution system with a domain-adapted system produced results that are consistent with the notion that the requirements for successful coreference resolution in this genre are quite different from those of the general domain, and also suggest that the baseline performance difference is quite large.

METSP: a maximum-entropy classifier based text mining tool for transporter-substrate identification with semistructured text.

PubMed

Zhao, Min; Chen, Yanming; Qu, Dacheng; Qu, Hong

2015-01-01

The substrates of a transporter are not only useful for inferring function of the transporter, but also important to discover compound-compound interaction and to reconstruct metabolic pathway. Though plenty of data has been accumulated with the developing of new technologies such as in vitro transporter assays, the search for substrates of transporters is far from complete. In this article, we introduce METSP, a maximum-entropy classifier devoted to retrieve transporter-substrate pairs (TSPs) from semistructured text. Based on the high quality annotation from UniProt, METSP achieves high precision and recall in cross-validation experiments. When METSP is applied to 182,829 human transporter annotation sentences in UniProt, it identifies 3942 sentences with transporter and compound information. Finally, 1547 confidential human TSPs are identified for further manual curation, among which 58.37% pairs with novel substrates not annotated in public transporter databases. METSP is the first efficient tool to extract TSPs from semistructured annotation text in UniProt. This tool can help to determine the precise substrates and drugs of transporters, thus facilitating drug-target prediction, metabolic network reconstruction, and literature classification.

Overview of the gene ontology task at BioCreative IV.

PubMed

Mao, Yuqing; Van Auken, Kimberly; Li, Donghui; Arighi, Cecilia N; McQuilton, Peter; Hayman, G Thomas; Tweedie, Susan; Schaeffer, Mary L; Laulederkind, Stanley J F; Wang, Shur-Jen; Gobeill, Julien; Ruch, Patrick; Luu, Anh Tuan; Kim, Jung-Jae; Chiang, Jung-Hsien; Chen, Yu-De; Yang, Chia-Jung; Liu, Hongfang; Zhu, Dongqing; Li, Yanpeng; Yu, Hong; Emadzadeh, Ehsan; Gonzalez, Graciela; Chen, Jian-Ming; Dai, Hong-Jie; Lu, Zhiyong

2014-01-01

Gene ontology (GO) annotation is a common task among model organism databases (MODs) for capturing gene function data from journal articles. It is a time-consuming and labor-intensive task, and is thus often considered as one of the bottlenecks in literature curation. There is a growing need for semiautomated or fully automated GO curation techniques that will help database curators to rapidly and accurately identify gene function information in full-length articles. Despite multiple attempts in the past, few studies have proven to be useful with regard to assisting real-world GO curation. The shortage of sentence-level training data and opportunities for interaction between text-mining developers and GO curators has limited the advances in algorithm development and corresponding use in practical circumstances. To this end, we organized a text-mining challenge task for literature-based GO annotation in BioCreative IV. More specifically, we developed two subtasks: (i) to automatically locate text passages that contain GO-relevant information (a text retrieval task) and (ii) to automatically identify relevant GO terms for the genes in a given article (a concept-recognition task). With the support from five MODs, we provided teams with >4000 unique text passages that served as the basis for each GO annotation in our task data. Such evidence text information has long been recognized as critical for text-mining algorithm development but was never made available because of the high cost of curation. In total, seven teams participated in the challenge task. From the team results, we conclude that the state of the art in automatically mining GO terms from literature has improved over the past decade while much progress is still needed for computer-assisted GO curation. Future work should focus on addressing remaining technical challenges for improved performance of automatic GO concept recognition and incorporating practical benefits of text-mining tools into real-world GO annotation. http://www.biocreative.org/tasks/biocreative-iv/track-4-GO/. Published by Oxford University Press 2014. This work is written by US Government employees and is in the public domain in the US.

[Mortality after the Second World War].

PubMed

Valkovics, E

1999-01-01

Mortality trends in Hungary since the Second World War are analyzed. Two periods are distinguished; the first, from 1946 to 1966, was a period of declining mortality and increasing life expectancy, and the second, from 1966 until the present, a period of rising mortality and declining life expectancy, particularly for males, coupled with relatively stable mortality levels for females. The author analyzes differences in causes of death by age in these two periods. (ANNOTATION)

THE BERBER LANGUAGES. A SELECTED BIBLIOGRAPHY.

ERIC Educational Resources Information Center

APPLEGATE, JOSEPH R.

ORGANIZED INTO TWO MAIN SECTIONS--BOOKS AND ARTICLES AND SERIAL PUBLICATIONS AND PUBLISHERS--THIS BIBLIOGRAPHY OF THE BERBER LANGUAGES REPRESENTS 758 ENTRIES, SOME OF WHICH ARE ANNOTATED. SUBDIVISIONS INCLUDE GENERAL LINGUISTICS, DIALECT GEOGRAPHY, PHONOLOGY, MORPHOLOGY, SYNTAX, LEXICON, TEXTS AND TRANSLATIONS, HISTORICAL AND COMPARATIVE STUDIES,…

Family Planning & Literacy.

ERIC Educational Resources Information Center

International Planned Parenthood Federation, London (England).

This publication is an International Planned Parenthood Federation (IPPF) annotated bibliography of books and articles concerned with family planning and literacy. The subject is divided into four major listings: (1) Literacy; (2) Education; (3) Literacy and Family Planning; and (4) Functional Literacy/Family Planning Projects and Programs.…

Communication and Culture in East Asia: A Bibliography.

ERIC Educational Resources Information Center

Dei, Sharon

This annotated bibliography lists books, articles, and other related sources dealing with the areas of Asian culture and communication. The 87 citations are organized under the following headings: (1) Asian Culture and Communication (in general); (2) China; (3) Japan; and (4) Korea. (HB)

Research and Publications in New York State History, 1980.

ERIC Educational Resources Information Center

Bliven, Briane C., Comp.

Books, monographs, and journal articles dealing with New York State history are listed and described. The briefly annotated bibliography is organized into alphabetically arranged, topical categories, including the following: Adirondacks; agriculture and farm life; American Revolution; archaeology; architecture and historic preservation; Black…

Annotation: Understanding the Development of Psychopathy

ERIC Educational Resources Information Center

Viding, Essi

2004-01-01

Background: Psychopaths are not only antisocial, but also have a callous and unemotional personality profile. This article selectively reviews evidence that psychopathic personality traits are an important factor in understanding and predicting the development of persistent antisocial conduct. Cognitive neuroscience research and more tentative…

A Rock Retrospective.

ERIC Educational Resources Information Center

O'Grady, Terence J.

1979-01-01

The author offers an analysis of musical techniques found in the major rock trends of the 1960s. An annotated list of selected readings and a subject-indexed list of selected recordings are appended. This article is part of a theme issue on popular music. (Editor/SJL)

Selected Bibliography of Educational Materials in Pakistan, Vol. 5 No. 2, 1971: Period Covered, April-June 1971.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated bibliography lists 111 entries of selected educational materials in Pakistan covering the period from April through June 1971. Thirty-two categories include: (1) administration, organization, and financing of education, (2) adult education, (3) agricultural education, (4) childhood education, (5) comparative education, (6)…

Selected Bibliography and Abstracts of Educational Materials in Pakistan, Vol. 9, No. 2, Period Covered April-June 1975.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated bibliography lists 101 entries of selected educational materials published in Pakistan during the period April through June 1975. Pakistani journals, newspapers, and government publications provide the source of the materials. They are organized into 28 categories: administration, organization, and financing of education; adult…

Selected Bibliography of Educational Materials in Pakistan, Vol. 5 No. 1, 1971: Period Covered, January-March 1971.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated bibliography lists 111 entries of selected educational materials in Pakistan covering the period from January through March 1971. Thirty-one categories include: (1) administration, organization, and financing of education, (2) childhood education, (3) comparative education, (4) curriculum, (5) development of education, (6)…

Selected Bibliography and Abstracts of Educational Materials in Pakistan, Volume 9, Number 4: Period Covered, October-December 1975.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

Contained in this annotated bibliography are 100 references to selected educational materials published in Pakistan during the period October through December, 1975. Pakistani journals, newspapers, and government publications provide the source of the materials. They are organized into 26 categories: administration, organization and financing of…

Selected Bibliography of Educational Materials in Pakistan, Vol. 9, No. 3, 1975, Period Covered July-September 1975.

ERIC Educational Resources Information Center

Saad, Geti, Ed.

This annotated bibliography lists 99 entries of selected educational materials published in Pakistan during the period July through September 1975. Most of the materials are taken from Pakistani journals, newspapers, and government publications. They are arranged alphabetically by author within 26 categories: administration, organization, and…

Selected Bibliography of Educational Materials in Pakistan, Vol. 5 No. 3, 1971: Period Covered, July-September 1971.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

This annotated bibliography lists 108 entries of selected educational materials in Pakistan covering the period from July through September 1971. Twnety-nine categories include: (1) administration, organization, and financing of education, (2) adult education, (3) childhood education, (4) comparative education, (5) curriculum, (6) development of…

Record of Current Educational Publications. Bulletin, 1929, No. 37

ERIC Educational Resources Information Center

Office of Education, United States Department of the Interior, 1930

1930-01-01

This document contains a classified and annotated list of current educational publications received by the library of the Office of Education for the period of July to September, 1929, inclusive. Books, pamphlets, and periodicals mentioned may ordinarily be obtained from their respective publishers either directly or through a dealer, or in the…

Selected Bibliography of Educational Materials in Pakistan, Vol. 10, No. 2, 1976, Period Covered April-June, 1976.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

One hundred citations of journals, newspapers, and government publications from Pakistan are included in this annotated bibliography. The selected educational materials were published during the period April through June, 1976. Entries are arranged alphabetically by author in 25 categories: administration, organization, and financing of education;…

Studying the potential impact of automated document classification on scheduling a systematic review update.

PubMed

Cohen, Aaron M; Ambert, Kyle; McDonagh, Marian

2012-04-19

Systematic Reviews (SRs) are an essential part of evidence-based medicine, providing support for clinical practice and policy on a wide range of medical topics. However, producing SRs is resource-intensive, and progress in the research they review leads to SRs becoming outdated, requiring updates. Although the question of how and when to update SRs has been studied, the best method for determining when to update is still unclear, necessitating further research. In this work we study the potential impact of a machine learning-based automated system for providing alerts when new publications become available within an SR topic. Some of these new publications are especially important, as they report findings that are more likely to initiate a review update. To this end, we have designed a classification algorithm to identify articles that are likely to be included in an SR update, along with an annotation scheme designed to identify the most important publications in a topic area. Using an SR database containing over 70,000 articles, we annotated articles from 9 topics that had received an update during the study period. The algorithm was then evaluated in terms of the overall correct and incorrect alert rate for publications meeting the topic inclusion criteria, as well as in terms of its ability to identify important, update-motivating publications in a topic area. Our initial approach, based on our previous work in topic-specific SR publication classification, identifies over 70% of the most important new publications, while maintaining a low overall alert rate. We performed an initial analysis of the opportunities and challenges in aiding the SR update planning process with an informatics-based machine learning approach. Alerts could be a useful tool in the planning, scheduling, and allocation of resources for SR updates, providing an improvement in timeliness and coverage for the large number of medical topics needing SRs. While the performance of this initial method is not perfect, it could be a useful supplement to current approaches to scheduling an SR update. Approaches specifically targeting the types of important publications identified by this work are likely to improve results.

Studying the potential impact of automated document classification on scheduling a systematic review update

PubMed Central

2012-01-01

Background Systematic Reviews (SRs) are an essential part of evidence-based medicine, providing support for clinical practice and policy on a wide range of medical topics. However, producing SRs is resource-intensive, and progress in the research they review leads to SRs becoming outdated, requiring updates. Although the question of how and when to update SRs has been studied, the best method for determining when to update is still unclear, necessitating further research. Methods In this work we study the potential impact of a machine learning-based automated system for providing alerts when new publications become available within an SR topic. Some of these new publications are especially important, as they report findings that are more likely to initiate a review update. To this end, we have designed a classification algorithm to identify articles that are likely to be included in an SR update, along with an annotation scheme designed to identify the most important publications in a topic area. Using an SR database containing over 70,000 articles, we annotated articles from 9 topics that had received an update during the study period. The algorithm was then evaluated in terms of the overall correct and incorrect alert rate for publications meeting the topic inclusion criteria, as well as in terms of its ability to identify important, update-motivating publications in a topic area. Results Our initial approach, based on our previous work in topic-specific SR publication classification, identifies over 70% of the most important new publications, while maintaining a low overall alert rate. Conclusions We performed an initial analysis of the opportunities and challenges in aiding the SR update planning process with an informatics-based machine learning approach. Alerts could be a useful tool in the planning, scheduling, and allocation of resources for SR updates, providing an improvement in timeliness and coverage for the large number of medical topics needing SRs. While the performance of this initial method is not perfect, it could be a useful supplement to current approaches to scheduling an SR update. Approaches specifically targeting the types of important publications identified by this work are likely to improve results. PMID:22515596

dictyBase 2015: Expanding data and annotations in a new software environment.

PubMed

Basu, Siddhartha; Fey, Petra; Jimenez-Morales, David; Dodson, Robert J; Chisholm, Rex L

2015-08-01

dictyBase is the model organism database for the social amoeba Dictyostelium discoideum and related species. The primary mission of dictyBase is to provide the biomedical research community with well-integrated high quality data, and tools that enable original research. Data presented at dictyBase is obtained from sequencing centers, groups performing high throughput experiments such as large-scale mutagenesis studies, and RNAseq data, as well as a growing number of manually added functional gene annotations from the published literature, including Gene Ontology, strain, and phenotype annotations. Through the Dicty Stock Center we provide the community with an impressive amount of annotated strains and plasmids. Recently, dictyBase accomplished a major overhaul to adapt an outdated infrastructure to the current technological advances, thus facilitating the implementation of innovative tools and comparative genomics. It also provides new strategies for high quality annotations that enable bench researchers to benefit from the rapidly increasing volume of available data. dictyBase is highly responsive to its users needs, building a successful relationship that capitalizes on the vast efforts of the Dictyostelium research community. dictyBase has become the trusted data resource for Dictyostelium investigators, other investigators or organizations seeking information about Dictyostelium, as well as educators who use this model system. © 2015 Wiley Periodicals, Inc.

On Crowd-verification of Biological Networks

PubMed Central

Ansari, Sam; Binder, Jean; Boue, Stephanie; Di Fabio, Anselmo; Hayes, William; Hoeng, Julia; Iskandar, Anita; Kleiman, Robin; Norel, Raquel; O’Neel, Bruce; Peitsch, Manuel C.; Poussin, Carine; Pratt, Dexter; Rhrissorrakrai, Kahn; Schlage, Walter K.; Stolovitzky, Gustavo; Talikka, Marja

2013-01-01

Biological networks with a structured syntax are a powerful way of representing biological information generated from high density data; however, they can become unwieldy to manage as their size and complexity increase. This article presents a crowd-verification approach for the visualization and expansion of biological networks. Web-based graphical interfaces allow visualization of causal and correlative biological relationships represented using Biological Expression Language (BEL). Crowdsourcing principles enable participants to communally annotate these relationships based on literature evidences. Gamification principles are incorporated to further engage domain experts throughout biology to gather robust peer-reviewed information from which relationships can be identified and verified. The resulting network models will represent the current status of biological knowledge within the defined boundaries, here processes related to human lung disease. These models are amenable to computational analysis. For some period following conclusion of the challenge, the published models will remain available for continuous use and expansion by the scientific community. PMID:24151423

A Review and Annotated Bibliography of the Literature Pertaining to Team and Small Group Performance (1989 to 1999)

DTIC Science & Technology

1999-12-01

good interventions. This literature could be helpful to those who are planning changes or interventions concerning a wide variety of team-related...factors. Examples of input variables that can potentially be influenced by changes or interventions include the organizational reward system...through local resources or inter -library loans, the number of articles we reviewed was 200. From those 200, we selected approximately 80 articles

Figure-associated text summarization and evaluation.

PubMed

Polepalli Ramesh, Balaji; Sethi, Ricky J; Yu, Hong

2015-01-01

Biomedical literature incorporates millions of figures, which are a rich and important knowledge resource for biomedical researchers. Scientists need access to the figures and the knowledge they represent in order to validate research findings and to generate new hypotheses. By themselves, these figures are nearly always incomprehensible to both humans and machines and their associated texts are therefore essential for full comprehension. The associated text of a figure, however, is scattered throughout its full-text article and contains redundant information content. In this paper, we report the continued development and evaluation of several figure summarization systems, the FigSum+ systems, that automatically identify associated texts, remove redundant information, and generate a text summary for every figure in an article. Using a set of 94 annotated figures selected from 19 different journals, we conducted an intrinsic evaluation of FigSum+. We evaluate the performance by precision, recall, F1, and ROUGE scores. The best FigSum+ system is based on an unsupervised method, achieving F1 score of 0.66 and ROUGE-1 score of 0.97. The annotated data is available at figshare.com (http://figshare.com/articles/Figure_Associated_Text_Summarization_and_Evaluation/858903).

Figure-Associated Text Summarization and Evaluation

PubMed Central

Polepalli Ramesh, Balaji; Sethi, Ricky J.; Yu, Hong

2015-01-01

Biomedical literature incorporates millions of figures, which are a rich and important knowledge resource for biomedical researchers. Scientists need access to the figures and the knowledge they represent in order to validate research findings and to generate new hypotheses. By themselves, these figures are nearly always incomprehensible to both humans and machines and their associated texts are therefore essential for full comprehension. The associated text of a figure, however, is scattered throughout its full-text article and contains redundant information content. In this paper, we report the continued development and evaluation of several figure summarization systems, the FigSum+ systems, that automatically identify associated texts, remove redundant information, and generate a text summary for every figure in an article. Using a set of 94 annotated figures selected from 19 different journals, we conducted an intrinsic evaluation of FigSum+. We evaluate the performance by precision, recall, F1, and ROUGE scores. The best FigSum+ system is based on an unsupervised method, achieving F1 score of 0.66 and ROUGE-1 score of 0.97. The annotated data is available at figshare.com (http://figshare.com/articles/Figure_Associated_Text_Summarization_and_Evaluation/858903). PMID:25643357

A review and evaluation of the Langley Research Center's Scientific and Technical Information Program. Results of phase 5. Design and evaluation of STI systems: A selected, annotated bibliography

NASA Technical Reports Server (NTRS)

Pinelli, T. E.; Hinnebusch, P. A.; Jaffe, J. M.

1981-01-01

A selected, annotated bibliography of literature citations related to the design and evaluation of STI systems is presented. The use of manual and machine-readable literature searches; the review of numerous books, periodicals reports, and papers; and the selection and annotation of literature citations were required. The bibliography was produced because the information was needed to develop the methodology for the review and evaluation project, and a survey of the literature did not reveal the existence of a single published source of information pertinent to the subject. Approximately 200 citations are classified in four subject areas. The areas include information - general; information systems - design and evaluation, including information products and services; information - use and need; and information - economics.

Jannovar: a java library for exome annotation.

PubMed

Jäger, Marten; Wang, Kai; Bauer, Sebastian; Smedley, Damian; Krawitz, Peter; Robinson, Peter N

2014-05-01

Transcript-based annotation and pedigree analysis are two basic steps in the computational analysis of whole-exome sequencing experiments in genetic diagnostics and disease-gene discovery projects. Here, we present Jannovar, a stand-alone Java application as well as a Java library designed to be used in larger software frameworks for exome and genome analysis. Jannovar uses an interval tree to identify all transcripts affected by a given variant, and provides Human Genome Variation Society-compliant annotations both for variants affecting coding sequences and splice junctions as well as untranslated regions and noncoding RNA transcripts. Jannovar can also perform family-based pedigree analysis with Variant Call Format (VCF) files with data from members of a family segregating a Mendelian disorder. Using a desktop computer, Jannovar requires a few seconds to annotate a typical VCF file with exome data. Jannovar is freely available under the BSD2 license. Source code as well as the Java application and library file can be downloaded from http://compbio.charite.de (with tutorial) and https://github.com/charite/jannovar. © 2014 WILEY PERIODICALS, INC.

Religion and Mental Health: A Bibliography.

ERIC Educational Resources Information Center

Summerlin, Florence A., Comp.

This annotated bibliography cites journal articles, reports, and books on religion and mental health published since 1970. The listing is intended to help psychologists, psychiatrists, clergymen, social workers, teachers, doctors and other professionals respond to requests for information and advice in areas spanning the common ground between…

Resource Materials on Scientific Integrity Issues.

ERIC Educational Resources Information Center

Macrina, Francis L., Ed.; Munro, Cindy L., Ed.

1993-01-01

The annotated bibliography contains 26 citations of books, monographs, and articles that may be useful to faculty and students in courses on scientific integrity. Topics addressed include ethical and legal considerations, fraud, technical writing and publication, intellectual property, notetaking, case study approach, conflict of interest, and…

Astronomical Resources: A Selected Halley's Comet Reading List.

ERIC Educational Resources Information Center

Fraknoi, Andrew

1985-01-01

Presents annotated lists of: (1) general introductory books about comets and Comet Halley; (2) books about comet history and lore; (3) introductory books for younger children; and (4) books for the serious amateur astronomer. A list of magazine and journal articles is included. (JN)

PHENYLKETONURIA, A COMPREHENSIVE BIBLIOGRAPHY, 1964.

ERIC Educational Resources Information Center

Children's Bureau (DHEW), Washington, DC.

INTENDED AS AN AID TO PROFESSIONAL AND TECHNICAL PERSONS INTERESTED IN PHENYLKETONURIA (PKU), THE BIBLIOGRAPHY LISTS AND ANNOTATES 817 ITEMS. CONTENT DIVISIONS ARE (1) GENERAL--MONOGRAPHS AND ARTICLES, (2) BIOCHEMISTRY--METABOLISM, EXPERIMENTS, TESTS, AND CASES IN WHICH THE EMPHASIS IS ON BIOCHEMISTRY, (3) GENETICS--GENE STUDIES, HEREDITARY…

SCHOOL BOARD BIBLIOGRAPHY.

ERIC Educational Resources Information Center

JAMES, H. THOMAS

A COMPREHENSIVE BIBLIOGRAPHY DESIGNED TO HIGHLIGHT MAJOR ISSUES AND ASSIST PROSPECTIVE RESEARCHERS IN THE FIELD OF SCHOOL BOARD RELATIONSHIPS CONSISTS OF ABSTRACTS OF SEVEN DISSERTATIONS FROM A SERIES OF CORRELATED STUDIES SPONSORED BY THE CARNEGIE FOUNDATION AND AN ANNOTATED BIBLIOGRAPHY OF 204 BOOKS, ARTICLES, CHAPTERS, REPORTS, AND THESES.…

Selected Bibliography of Egyptian Educational Materials, Vol. 1, No. 4, 1975.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

This annotated bibliography of Egyptian publications on education contains 108 entries. Publications include journal articles, books, and government documents. The following educational topics are covered: adult education, teaching Arabic language, art education, audiovisual aids, teaching civics, formation of committees, secondary school courses…

David Macaulay's Pyramid.

ERIC Educational Resources Information Center

Frew, Andrew W.

1997-01-01

Integrating literature and mathematics can be meaningful using David Macaulay's "Pyramid." This article provides an annotated bibliography of picture books, fiction, folk tales, nonfiction, videotapes, audio books, and CD-ROMs for grades 1-12 to support a unit on Egypt. Describes related math activities; and highlights a catalog of…

An Annotated Bibliography for Environmental Educators.

ERIC Educational Resources Information Center

Stitt, Thomas R.

This bibliography is organized according to occupations: biology and agriculture, business, marketing, management, health, industrial, and public service. In addition, entries are further classified as air, water, public water supply, land pollution, noise, atomic radiation, and general. Over 130 books, publications, and articles are cited, with…

Libraries and Literacy: Making It Work. An Annotated Bibliography

ERIC Educational Resources Information Center

Lamontagne, Manon

2007-01-01

This bibliography was compiled for The Centre for Literacy's 2007 Summer Institute--"Libraries and Literacy: Making It Work." The literature represented here includes research studies, descriptive articles, guides and manuals. Selections address the principles, "best practices" and assessment of library involvement in literacy…

PR Bibliography, 2001.

ERIC Educational Resources Information Center

Ramsey, Shirley, Ed.

2001-01-01

This annotated bibliography presents an overview of journal articles and books published in 2000 on public relations that can be helpful to teachers and students as well as to practitioners and managers. This bibliography is subdivided into 29 categories including campaigns; community relations; corporate image; education; employee relations;…

Copyright Resources for School Librarians

ERIC Educational Resources Information Center

Johnson, Yvonne M.; Johnson, Nicole M.

2016-01-01

This article provides a collection of annotated citations for online resources of interest to school librarians; the focus is on copyright law, related information, and guidelines. The citations are organized by themes based on common issues. Copyright protects originally created works, including movies, recorded music performances, novels,…

PR Bibliography, 2002.

ERIC Educational Resources Information Center

Ramsey, Shirley, Ed.

2002-01-01

This annotated bibliography presents an overview of journal articles and books published in 2001 on public relations that can be helpful to teachers and students as well as to practitioners and managers. This bibliography is subdivided into 40 categories including campaigns; consumer relations; community relations; corporate social responsibility;…

Colonial Spanish America, The Burbon Period

ERIC Educational Resources Information Center

Barbier, Jacques A.; Burkholder, Mark A.

1987-01-01

Provides an extensive annotated bibliography of materials on 18th century Latin America. The bibliography is divided into three sections: An introductory overview; selected topics such as The Enlightenment and women; and major regions. (AEM)

Selected Reference Books of 1999.

ERIC Educational Resources Information Center

McIlvaine, Eileen

2000-01-01

Presents annotated bibliographies of a selection of recent scholarly and general reference works under the subject headings of publishing, periodical indexes, philosophy and religion, literature, music, art, photography, social sciences, business, history, and new editions. (LRW)

Food-Custom and Nurture.

ERIC Educational Resources Information Center

Wilson, Christine S., Ed.; Renchler, Ron, Ed.

1979-01-01

Presents an updated, selective, annotated bibliography of publications, new periodicals, and scientific research reports in these subject categories: sociocultural factors (nutritional anthropology), environmental factors (biocultural anthropology), biologic factors (physical anthropology), psychologic aspects, food traditions, and implications.…

AN ANNOTATED BIBLIOGRAPHY OF CLIMATIC MAPS OF ANGOLA,

DTIC Science & Technology

Contents: Map of political divisions of Africa; Map of Angola; Sources with abstracts listed alphabetically by author; Alphabetical author index ; Subject heading index with period of record; Subject heading index with map scales.

Non-Coding RNA Analysis Using the Rfam Database.

PubMed

Kalvari, Ioanna; Nawrocki, Eric P; Argasinska, Joanna; Quinones-Olvera, Natalia; Finn, Robert D; Bateman, Alex; Petrov, Anton I

2018-06-01

Rfam is a database of non-coding RNA families in which each family is represented by a multiple sequence alignment, a consensus secondary structure, and a covariance model. Using a combination of manual and literature-based curation and a custom software pipeline, Rfam converts descriptions of RNA families found in the scientific literature into computational models that can be used to annotate RNAs belonging to those families in any DNA or RNA sequence. Valuable research outputs that are often locked up in figures and supplementary information files are encapsulated in Rfam entries and made accessible through the Rfam Web site. The data produced by Rfam have a broad application, from genome annotation to providing training sets for algorithm development. This article gives an overview of how to search and navigate the Rfam Web site, and how to annotate sequences with RNA families. The Rfam database is freely available at http://rfam.org. © 2018 by John Wiley & Sons, Inc. Copyright © 2018 John Wiley & Sons, Inc.

Selected Bibliography and Abstracts of Educational Materials in Pakistan. Volume 6, Number 1, 1972. Period Covered January-March 1972.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

The annotated bibliography lists 111 entries of selected educational materials from Pakistan covering the period from January through March 1972. Entries are listed alphabetically by author under the following thirty-one categories; 1) administrative, organization and financing of education; 2) agricultural education; 3) childhood education; 4)…

RESEARCH IN READING FOR THE MIDDLE GRADES. AN ANNOTATED BIBLIOGRAPHY.

ERIC Educational Resources Information Center

CUTTS, WARREN G.

THIS BULLETIN PRESENTS RESEARCH STUDIES IN READING ON THE UPPER ELEMENTARY GRADE LEVEL DURING THE PERIOD FROM 1955 THROUGH 1960. THIS COMPILATION WAS UNDERTAKEN BY THE OFFICE OF EDUCATION IN AN ATTEMPT TO BRING TOGETHER THE UNPUBLISHED AS WELL AS PUBLISHED STUDIES OF THAT 5-YEAR PERIOD. THE 238 STUDIES WHICH ARE OUTLINED, SUMMARIZED, AND ANNOTATED…

Guide to Special Information in Scientific and Engineering Journals.

ERIC Educational Resources Information Center

Harris, Mary Elizabeth

This update of a 1983 annotated bibliography lists 298 special features or special issues of science and technology periodicals with emphasis on compilations of information that appear in periodicals on a regular basis. In addition to the 203 entries listed in the original edition, 95 new entries are included. Subjects covered in the guide include…

Research in Rural Issues: An Annotated Bibliography.

ERIC Educational Resources Information Center

Jones, Warren, Ed.

To facilitate research on rural issues, a task force composed of prominent rural residents and experts from universities in Illinois prepared this bibliography. Several thousand books, research reports, commission papers, government reports, and journal articles--most published after 1980--are listed in this bibliography. While focused on…

The Energy Crisis -- Aids to Study.

ERIC Educational Resources Information Center

McDaniel, Margaret, Comp.

Over one-hundred citations, the majority of which are current works dating from the seventies, are provided in this annotated bibliography focusing on energy. Entries include books, pamphlets, reports, magazine articles, bibliographies, newsletters, and curriculum materials, such as audiovisual aids, guides and units, and simulations which will be…

Financial Support for Community Colleges: A Bibliographic Summary with Abstracts.

ERIC Educational Resources Information Center

Maricopa County Community Coll. District, Phoenix, AZ.

This annotated bibliography, arranged alphabetically by title, cites ERIC information analysis products; state annual fiscal reports, budget recommendations, and descriptive reports; articles; project reports; case studies; position papers; and monographs. Topics covered by these materials include: issues and trends in community college financing,…

Selected Bibliography of Egyptian Educational Materials, Vol. 1, No. 1, 1975.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

There are 101 selected entries in this annotated bibliography of Egyptian materials on education published in 1975. Materials include journal articles, books, and government documents. The bibliography covers the following topics: laws and legislation, meetings and symposia, primary schools, preparatory schools, secondary schools, experimental…

Teen Sexuality Today: Bibliography of Selected Resources.

ERIC Educational Resources Information Center

Planned Parenthood Federation of America, Inc., New York, NY.

This document presents a selected bibliography of recent books and journal articles relating to adolescent sexuality and reproductive health. The compilation of annotated references is divided into sections which focus on the issues of: (1) Sexuality Education; (2) Contraception; (3) Parenthood; (4) Communication with Parents; (5) Reproductive…

Personality Theory and Psychotherapy

ERIC Educational Resources Information Center

Fagan, Joen; And Others

1974-01-01

This group of articles discusses various aspects of Gestalt Therapy including its major contributions, role in psychotherapy, and contributions of Gestalt psychology in general. There is some discussion of the philosophical background of Gestalt therapy along with Gestalt theory of emotion. A case study and an annotated bibliography are included…

Selected Bibliography of Egyptian Educational Materials, Vol. 1, No. 2, 1975.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

There are 108 selected entries in this annotated bibliography of Egyptian materials on education published in 1975. Materials include journal articles, books, and government documents. The bibliography covers the following topics: adolescence, art education, child upbringing, comprehensive schools, curricula, educational change, educational aids,…

PR Bibliography, 1999.

ERIC Educational Resources Information Center

Ramsey, Shirley, Ed.

1999-01-01

This annotated bibliography presents an overview of journal articles and books on public relations that can be helpful to teachers and students as well as to practitioners and managers. New categories for this 1999 edition of the bibliography include Public Relations Theory, Feminist Issues in Public Relations, and Environmental Public Relations.…

Selected Bibliography of Egyptian Educational Materials, Vol. 1, No. 3, 1975.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

There are 101 selected entries in this annotated bibliography of Egyptian materials on education published in 1975. Materials include journal articles, books, and government documents. The bibliography covers the following topics: academic certificates and dissertations, art education, audiovisual aids, camps, civics curricula, conferences and…

Selected Bibliography of Egyptian Educational Materials, Vol. 2, No. 3, 1976.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

The selective annotated bibliography of Egyptian educational publications contains 109 entries on 42 topics. Included are journal articles, books, and government documents published during 1976. Content includes the following topics: adult education, art education, audiovisual aids, care for distinguished students, educational planning,…

Color Me a Writer: Teaching Students To Think Critically.

ERIC Educational Resources Information Center

Viau, Elizabeth Anne

1998-01-01

Teachers and students can use color to identify different types of writing. This article describes using color to highlight annotations, identity, topic sentences, thoughts and emotions, logical arguments, advertising and selling, showing and telling, and looking and seeing. Includes sample assignments for identifying emotional content, topic…

Film Study: A Resource Guide.

ERIC Educational Resources Information Center

Manchel, Frank

This resource guide describes six popular approaches to the study of the cinema and provides a practical analysis of selected books, materials, and information about motion picture rentals. Highlighting this extensive survey of film studies are the annotated, critical bibliographies and filmographies of significant books, articles and films by and…

Emergency Health Services Selected Bibliography.

ERIC Educational Resources Information Center

Health Services and Mental Health Administration (DHEW), Bethesda, MD.

This annotated bibliography contains books, journal articles, visual aids, and other documents pertaining to emergency health care, which are organized according to: (1) publications dealing with day-to-day health emergencies that occur at home, work, and play, (2) documents that will help communities prepare for emergencies, including natural…

Bibliocable. Revised Edition.

ERIC Educational Resources Information Center

Cable Television Information Center, Washington, DC.

This selective, annotated bibliography is a revision of the original published in 1972 (ED 071 402). Some 104 books, articles, and reports included here deal with access, applications, franchising, regulation, technology, and other aspects of cable television. The listings are of two types in each category. First are revisions of the original…

Exploring the Universe: An Introductory Bibliography in Astronomy.

ERIC Educational Resources Information Center

Fraknoi, Andrew

Arranged in five sections, this annotated bibliography cites over 40 introductory level resources on astronomy published between 1972 and 1981. A note on the availability of these resources precedes sections covering general introductory books, magazines featuring non-technical articles, general books for readers with slight background,…

Targeting malaria parasite proteins to the erythrocyte.

PubMed

Templeton, Thomas J; Deitsch, Kirk W

2005-09-01

The intraerythrocytic stages of the protozoan parasite Plasmodium falciparum reside within a parasitophorous vacuole (PV) and set up unique "extraparasite, intraerythrocyte" protein-trafficking pathways that target parasite-encoded proteins to the erythrocyte cytoplasm and cell surface. Two recent articles report the identification of trafficking motifs that regulate the transport of parasite-encoded proteins across the PV. These articles greatly aid the annotation of the parasite "secretome" catalog of proteins that are targeted to the erythrocyte cytoplasm or cell membrane.

The history of the CATH structural classification of protein domains.

PubMed

Sillitoe, Ian; Dawson, Natalie; Thornton, Janet; Orengo, Christine

2015-12-01

This article presents a historical review of the protein structure classification database CATH. Together with the SCOP database, CATH remains comprehensive and reasonably up-to-date with the now more than 100,000 protein structures in the PDB. We review the expansion of the CATH and SCOP resources to capture predicted domain structures in the genome sequence data and to provide information on the likely functions of proteins mediated by their constituent domains. The establishment of comprehensive function annotation resources has also meant that domain families can be functionally annotated allowing insights into functional divergence and evolution within protein families. Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

BioTextQuest: a web-based biomedical text mining suite for concept discovery.

PubMed

Papanikolaou, Nikolas; Pafilis, Evangelos; Nikolaou, Stavros; Ouzounis, Christos A; Iliopoulos, Ioannis; Promponas, Vasilis J

2011-12-01

BioTextQuest combines automated discovery of significant terms in article clusters with structured knowledge annotation, via Named Entity Recognition services, offering interactive user-friendly visualization. A tag-cloud-based illustration of terms labeling each document cluster are semantically annotated according to the biological entity, and a list of document titles enable users to simultaneously compare terms and documents of each cluster, facilitating concept association and hypothesis generation. BioTextQuest allows customization of analysis parameters, e.g. clustering/stemming algorithms, exclusion of documents/significant terms, to better match the biological question addressed. http://biotextquest.biol.ucy.ac.cy vprobon@ucy.ac.cy; iliopj@med.uoc.gr Supplementary data are available at Bioinformatics online.

Management of Dynamic Biomedical Terminologies: Current Status and Future Challenges

PubMed Central

Dos Reis, J. C.; Pruski, C.

2015-01-01

Summary Objectives Controlled terminologies and their dependent artefacts provide a consensual understanding of a domain while reducing ambiguities and enabling reasoning. However, the evolution of a domain’s knowledge directly impacts these terminologies and generates inconsistencies in the underlying biomedical information systems. In this article, we review existing work addressing the dynamic aspect of terminologies as well as their effects on mappings and semantic annotations. Methods We investigate approaches related to the identification, characterization and propagation of changes in terminologies, mappings and semantic annotations including techniques to update their content. Results and conclusion Based on the explored issues and existing methods, we outline open research challenges requiring investigation in the near future. PMID:26293859

A bootstrapping method for development of Treebank

NASA Astrophysics Data System (ADS)

Zarei, F.; Basirat, A.; Faili, H.; Mirain, M.

2017-01-01

Using statistical approaches beside the traditional methods of natural language processing could significantly improve both the quality and performance of several natural language processing (NLP) tasks. The effective usage of these approaches is subject to the availability of the informative, accurate and detailed corpora on which the learners are trained. This article introduces a bootstrapping method for developing annotated corpora based on a complex and rich linguistically motivated elementary structure called supertag. To this end, a hybrid method for supertagging is proposed that combines both of the generative and discriminative methods of supertagging. The method was applied on a subset of Wall Street Journal (WSJ) in order to annotate its sentences with a set of linguistically motivated elementary structures of the English XTAG grammar that is using a lexicalised tree-adjoining grammar formalism. The empirical results confirm that the bootstrapping method provides a satisfactory way for annotating the English sentences with the mentioned structures. The experiments show that the method could automatically annotate about 20% of WSJ with the accuracy of F-measure about 80% of which is particularly 12% higher than the F-measure of the XTAG Treebank automatically generated from the approach proposed by Basirat and Faili [(2013). Bridge the gap between statistical and hand-crafted grammars. Computer Speech and Language, 27, 1085-1104].

Construction of ontology augmented networks for protein complex prediction.

PubMed

Zhang, Yijia; Lin, Hongfei; Yang, Zhihao; Wang, Jian

2013-01-01

Protein complexes are of great importance in understanding the principles of cellular organization and function. The increase in available protein-protein interaction data, gene ontology and other resources make it possible to develop computational methods for protein complex prediction. Most existing methods focus mainly on the topological structure of protein-protein interaction networks, and largely ignore the gene ontology annotation information. In this article, we constructed ontology augmented networks with protein-protein interaction data and gene ontology, which effectively unified the topological structure of protein-protein interaction networks and the similarity of gene ontology annotations into unified distance measures. After constructing ontology augmented networks, a novel method (clustering based on ontology augmented networks) was proposed to predict protein complexes, which was capable of taking into account the topological structure of the protein-protein interaction network, as well as the similarity of gene ontology annotations. Our method was applied to two different yeast protein-protein interaction datasets and predicted many well-known complexes. The experimental results showed that (i) ontology augmented networks and the unified distance measure can effectively combine the structure closeness and gene ontology annotation similarity; (ii) our method is valuable in predicting protein complexes and has higher F1 and accuracy compared to other competing methods.

The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations.

PubMed

Cerqueira, Gustavo C; Arnaud, Martha B; Inglis, Diane O; Skrzypek, Marek S; Binkley, Gail; Simison, Matt; Miyasato, Stuart R; Binkley, Jonathan; Orvis, Joshua; Shah, Prachi; Wymore, Farrell; Sherlock, Gavin; Wortman, Jennifer R

2014-01-01

The Aspergillus Genome Database (AspGD; http://www.aspgd.org) is a freely available web-based resource that was designed for Aspergillus researchers and is also a valuable source of information for the entire fungal research community. In addition to being a repository and central point of access to genome, transcriptome and polymorphism data, AspGD hosts a comprehensive comparative genomics toolbox that facilitates the exploration of precomputed orthologs among the 20 currently available Aspergillus genomes. AspGD curators perform gene product annotation based on review of the literature for four key Aspergillus species: Aspergillus nidulans, Aspergillus oryzae, Aspergillus fumigatus and Aspergillus niger. We have iteratively improved the structural annotation of Aspergillus genomes through the analysis of publicly available transcription data, mostly expressed sequenced tags, as described in a previous NAR Database article (Arnaud et al. 2012). In this update, we report substantive structural annotation improvements for A. nidulans, A. oryzae and A. fumigatus genomes based on recently available RNA-Seq data. Over 26 000 loci were updated across these species; although those primarily comprise the addition and extension of untranslated regions (UTRs), the new analysis also enabled over 1000 modifications affecting the coding sequence of genes in each target genome.

MSeqDR mvTool: A mitochondrial DNA Web and API resource for comprehensive variant annotation, universal nomenclature collation, and reference genome conversion.

PubMed

Shen, Lishuang; Attimonelli, Marcella; Bai, Renkui; Lott, Marie T; Wallace, Douglas C; Falk, Marni J; Gai, Xiaowu

2018-06-01

Accurate mitochondrial DNA (mtDNA) variant annotation is essential for the clinical diagnosis of diverse human diseases. Substantial challenges to this process include the inconsistency in mtDNA nomenclatures, the existence of multiple reference genomes, and a lack of reference population frequency data. Clinicians need a simple bioinformatics tool that is user-friendly, and bioinformaticians need a powerful informatics resource for programmatic usage. Here, we report the development and functionality of the MSeqDR mtDNA Variant Tool set (mvTool), a one-stop mtDNA variant annotation and analysis Web service. mvTool is built upon the MSeqDR infrastructure (https://mseqdr.org), with contributions of expert curated data from MITOMAP (https://www.mitomap.org) and HmtDB (https://www.hmtdb.uniba.it/hmdb). mvTool supports all mtDNA nomenclatures, converts variants to standard rCRS- and HGVS-based nomenclatures, and annotates novel mtDNA variants. Besides generic annotations from dbNSFP and Variant Effect Predictor (VEP), mvTool provides allele frequencies in more than 47,000 germline mitogenomes, and disease and pathogenicity classifications from MSeqDR, Mitomap, HmtDB and ClinVar (Landrum et al., 2013). mvTools also provides mtDNA somatic variants annotations. "mvTool API" is implemented for programmatic access using inputs in VCF, HGVS, or classical mtDNA variant nomenclatures. The results are reported as hyperlinked html tables, JSON, Excel, and VCF formats. MSeqDR mvTool is freely accessible at https://mseqdr.org/mvtool.php. © 2018 Wiley Periodicals, Inc.

Heart sound segmentation of pediatric auscultations using wavelet analysis.

PubMed

Castro, Ana; Vinhoza, Tiago T V; Mattos, Sandra S; Coimbra, Miguel T

2013-01-01

Auscultation is widely applied in clinical activity, nonetheless sound interpretation is dependent on clinician training and experience. Heart sound features such as spatial loudness, relative amplitude, murmurs, and localization of each component may be indicative of pathology. In this study we propose a segmentation algorithm to extract heart sound components (S1 and S2) based on it's time and frequency characteristics. This algorithm takes advantage of the knowledge of the heart cycle times (systolic and diastolic periods) and of the spectral characteristics of each component, through wavelet analysis. Data collected in a clinical environment, and annotated by a clinician was used to assess algorithm's performance. Heart sound components were correctly identified in 99.5% of the annotated events. S1 and S2 detection rates were 90.9% and 93.3% respectively. The median difference between annotated and detected events was of 33.9 ms.

Seshat: A Web service for accurate annotation, validation, and analysis of TP53 variants generated by conventional and next-generation sequencing.

PubMed

Tikkanen, Tuomas; Leroy, Bernard; Fournier, Jean Louis; Risques, Rosa Ana; Malcikova, Jitka; Soussi, Thierry

2018-07-01

Accurate annotation of genomic variants in human diseases is essential to allow personalized medicine. Assessment of somatic and germline TP53 alterations has now reached the clinic and is required in several circumstances such as the identification of the most effective cancer therapy for patients with chronic lymphocytic leukemia (CLL). Here, we present Seshat, a Web service for annotating TP53 information derived from sequencing data. A flexible framework allows the use of standard file formats such as Mutation Annotation Format (MAF) or Variant Call Format (VCF), as well as common TXT files. Seshat performs accurate variant annotations using the Human Genome Variation Society (HGVS) nomenclature and the stable TP53 genomic reference provided by the Locus Reference Genomic (LRG). In addition, using the 2017 release of the UMD_TP53 database, Seshat provides multiple statistical information for each TP53 variant including database frequency, functional activity, or pathogenicity. The information is delivered in standardized output tables that minimize errors and facilitate comparison of mutational data across studies. Seshat is a beneficial tool to interpret the ever-growing TP53 sequencing data generated by multiple sequencing platforms and it is freely available via the TP53 Website, http://p53.fr or directly at http://vps338341.ovh.net/. © 2018 Wiley Periodicals, Inc.

Crowd-assisted polyp annotation of virtual colonoscopy videos

NASA Astrophysics Data System (ADS)

Park, Ji Hwan; Nadeem, Saad; Marino, Joseph; Baker, Kevin; Barish, Matthew; Kaufman, Arie

2018-03-01

Virtual colonoscopy (VC) allows a radiologist to navigate through a 3D colon model reconstructed from a computed tomography scan of the abdomen, looking for polyps, the precursors of colon cancer. Polyps are seen as protrusions on the colon wall and haustral folds, visible in the VC y-through videos. A complete review of the colon surface requires full navigation from the rectum to the cecum in antegrade and retrograde directions, which is a tedious task that takes an average of 30 minutes. Crowdsourcing is a technique for non-expert users to perform certain tasks, such as image or video annotation. In this work, we use crowdsourcing for the examination of complete VC y-through videos for polyp annotation by non-experts. The motivation for this is to potentially help the radiologist reach a diagnosis in a shorter period of time, and provide a stronger confirmation of the eventual diagnosis. The crowdsourcing interface includes an interactive tool for the crowd to annotate suspected polyps in the video with an enclosing box. Using our work flow, we achieve an overall polyps-per-patient sensitivity of 87.88% (95.65% for polyps >=5mm and 70% for polyps <5mm). We also demonstrate the efficacy and effectiveness of a non-expert user in detecting and annotating polyps and discuss their possibility in aiding radiologists in VC examinations.

Data Entry. ERIC Processing Manual, Section IX.

ERIC Educational Resources Information Center

Weller, Carolyn R., Ed.

Documents and journal articles acquired by the ERIC Clearinghouses are processed (cataloged, indexed, abstracted/annotated) for retrieval and use by the educational community. The bibliographic data resulting from this processing are provided by the ERIC Clearinghouses on a regular basis to the ERIC Processing and Reference Facility. The ERIC…

Consumer Health

ERIC Educational Resources Information Center

Bibel, Barbara

2010-01-01

This article presents an annotated bibliography of 19 titles that focus on cancer and health-care reform. These include: (1) Anderson, John W. "Stand by Her: A Breast Cancer Guide for Men." AMACOM: American Management Assn.; (2) Carstensen, Laura L. "A Long Bright Future: An Action Plan for a Lifetime of Happiness, Health, and Financial Security."…

Selected Bibliography of Arab Educational Materials, Vol. 1.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

One hundred fifty-four English language annotations of books, articles, and government publications about education in 11 Arab countries are contained in this bibliography. Drawing from materials published in 1976, the bibliography examines education for all age groups and ability levels in Egypt, Bahrain, Iraq, Jordan, Kuwait, Oman, Qatar, Saudi…

Bibliografia Especializada: Educacion Basica (Specialized Bibliography: Basic Education).

ERIC Educational Resources Information Center

Boletin del Centro Nacional de Documentacion e Informacion Educativa, 1971

1971-01-01

This specialized international bibliography on basic education lists almost 50 documents written between 1969 and 1971 in Spanish, French, and Italian on the topic of elementary education. Annotations are provided for nine of the articles. Specific topics range from elementary reading and math education to curriculum planning. (VM)

Selected Bibliography and Abstracts of Educational Materials in Pakistan, Vol. 15, No. 4, October-December, 1981.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

Over 85 government publications, newspaper articles, monographs, and syllabi published between October and December 1981 are cited in this annotated listing. Entries are listed alphabetically by author under the following topics: educational administration, organization, and finance; curriculum; educational planning; examinations; higher…

Selected Bibliography and Abstracts of Educational Materials in Pakistan, Vol. 15, No. 3, July-September, 1981.

ERIC Educational Resources Information Center

Saad, Geti, Comp.

Government publications, newspaper articles, monographs, and syllabi published between July and September 1981 and dealing with Pakistani education are cited in this annotated listing. Entries are organized by the following topics: educational administration, organization, and financing; curriculum; educational development; educational goals,…

Tests and Testing for Bilingual Children: A Bibliography of Literature.

ERIC Educational Resources Information Center

Kirsch, Judith, Comp.

This annotated listing cites tests, guides, dissertations, journal articles, research reports, reference materials, and conference papers and proceedings regarding tests and testing for bilingual children. Items cited were published between 1964-81. The listing is one of a series of bibliographies from a computerized database, Bilingual Education…

A Skeptic's Bookshelf: Scientific Responses to Pseudoscience. An Annotated Bibliography.

ERIC Educational Resources Information Center

Fraknoi, Andrew

1984-01-01

Lists nontechnical books and articles on the various claims of "paranormal" events. Includes general references and materials on: astrology; unidentified flying objects (UFO's); ancient astronauts; lunacy and the moon; Velikovsky and "Worlds in Collision"; the Bermuda triangle; Sirius B and the Dogon; the Tunguska event; creationism; and…

Parent Resources Inventory.

ERIC Educational Resources Information Center

Alberta Education Response Centre, Edmonton.

This resource guide provides an annotated bibliography of 101 articles and newsletters of interest to parents and teachers of children in preschool through grade 3. The bibliography contains the titles and short descriptions of materials, selected with the assistance of parents and teachers from across Alberta (Canada), on a wide range of topics…

Learning about the Soviets: Selected Teaching Resources.

ERIC Educational Resources Information Center

Educators for Social Responsibility, Cambridge, MA.

Over 120 resources for teaching secondary and postsecondary level students about the Soviet Union, most of which have been produced since 1980, are listed in this guide. A resource list focusing on "Ten Things Soviets Say You Should Read to Understand Them" precedes annotated citations of articles; books; curricula; organizations…

Japanese Culture in the United States of America; An Annotated Bibliography.

ERIC Educational Resources Information Center

Connor, John W., Comp.

This bibliography describes and briefly reviews, from an anthropological perspective, books and articles on the Japanese in the United States. Works cited include: (1) bibliographies; (2) general studies on Japanese Americans; (3) works dealing with the cultural heritage of the Japanese immigrant generation; (4) literature on the Japanese…

Marketing the Arts: A Selected and Annotated Bibliography.

ERIC Educational Resources Information Center

Nakamoto, Kent, Comp.; Levin, Kathi, Comp.

Compiled from the marketing, arts, and arts management literature, this selected list includes materials ranging from theoretical articles and reports of studies to practical guides for marketing techniques. It consists of three sections: Primary Sources, Secondary Sources, and Surveys. Of particular interest to the arts administrator, the first…

Learning Research and Development Center Publications List Update, 1995.

ERIC Educational Resources Information Center

Pittsburgh Univ., PA. Learning Research and Development Center.

This document presents an annotated listing of articles, conference papers, book chapters, papers, and books published in 1995 as a result of investigations carried on at the University of Pittsburgh's Learning Research and Development Center (LRDC). The publications are organized alphabetically by author and chronologically within each author's…

Legacy literature-a need for virtual libraries

USDA-ARS?s Scientific Manuscript database

After years of conducting, writing-up, and reviewing research, many entomologists have examined, organized, and annotated some as 2-3 gigabytes of pdfs and 4-5 file cabinets of hard-copy articles, in addition to thousands of spreadsheets, docs, jpgs, and wav files of data. This is a useful legacy th...

Communication Apprehension. Focused Access to Selected Topics (FAST) Bibliography No. 15.

ERIC Educational Resources Information Center

Shermis, Michael

This annotated bibliography contains 31 references of articles and papers in the ERIC database that deal with communication apprehension (CA). The first section provides strategies for instructors and students to alleviate communication apprehension, speech anxiety, stage fright, and other problems people have with public speaking. The second…

CONTRIBUTIONS OF 20TH CENTURY WOMEN TO PHYSICS

Science.gov Websites

Annotated Photo Gallery In Her Own Words Some Physics History 500+ Books and Articles Field Editors Physical Society, the University of California, UCLA Physics and Astronomy Department, the Laboratories of Astrophysics Burbidge, E. M. Burnell, Jocelyn Faber, Sandra Leavitt, Henrietta Payne-Gaposchkin,Cecilia Rubin

Selected Bibliography: Refugees and Refugee Migration.

ERIC Educational Resources Information Center

National Council of the Churches of Christ of the United States of America, New York, NY. Church World Service.

This is a partially annotated bibliography of books, journal articles, and other materials on refugees and refugee issues from an international perspective and from the perspective of several countries around the world. The materials cover a range of topics including general theories on refugees; the refugee experience before 1960 and the…

Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)

DOE PAGES

Huntemann, Marcel; Ivanova, Natalia N.; Mavromatis, Konstantinos; ...

2016-03-21

After publication of this study [1], we noticed that the Strain ID summary was not removed from the PDF due to a copyediting error. The original version of this article was corrected. The publisher apologizes for any inconvenience caused.

Selected Bibliography of Polish Educational Materials. Volume 11, Number 4, 1972.

ERIC Educational Resources Information Center

Wieczorek, Barbara, Ed.; Krajewska, Korolina, Ed.

The publication is an annotated bibliography of books, papers, and articles on Polish education which were published from September to November, 1972. Entries are arranged alphabetically by author under the following subjects: History of Education, Laws and Legislation, General Information on Education, Social and Educational Sciences, Teacher's…

Selected Bibliography on Associate Degree Programs in Nursing.

ERIC Educational Resources Information Center

National League for Nursing, New York, NY. Dept. of Associate Degree Programs.

This annotated bibliography consists of 99 entries, primarily journal articles, most of which were published after 1966. Organization is under the following headings: (1) Associate Degree Nursing (ADN) Programs--What They Are, (2) Planning for ADN Program, (3) Move to Educational Institutions, (4) Administration, (5) Faculty, (6) Teaching Methods,…

An Annotated Bibliography for the Development and Operation of Historic Sites.

ERIC Educational Resources Information Center

American Association of Museums, Washington, DC.

Over 340 books, articles, manuals, newsletters, and other publications concerning the development and operation of historic sites are listed. Most cited materials were published since 1972 and are arranged under four major categories: site development and planning, documentation and preservation of structures and objects, interpretation of…

A Resource Book for Building English Proficiency.

ERIC Educational Resources Information Center

Guillen, Leonor; And Others

This resource book is a collection of articles, annotated references, and resource lists to supplement the accompanying handbook and trainer's guide for educators planning or working with English language programs for limited English proficient (LEP) students. The first part presents resources of interest to administrators adapting programs for a…

Noise and Sound Control in Open Plan Schools.

ERIC Educational Resources Information Center

Schellenberg, Ben

This annotated bibliography includes summaries of 19 articles and reports dealing with noise control and acoustical design in school buildings. A brief introduction discusses the need for careful attention to acoustics in any school construction or remodeling project, with particular emphasis on the need for special acoustical measures in an open…

PR Bibliography, 2000.

ERIC Educational Resources Information Center

Hiebert, Ray E., Ed.

2000-01-01

This annotated bibliography presents an overview of journal articles and books on public relations that can be helpful to teachers and students as well as to practitioners and managers. Categories for this 2000 edition correspond to knowledge needed by public relations undergraduate majors, as determined in a study conducted by the 1999 Commission…

Resource Letter PD-1 on Particle Detectors

ERIC Educational Resources Information Center

Trower, W. Peter

1970-01-01

Intended to guide college physicists to literature on nuclear and sub-nuclear particle detectors. The paper contains a discussion of (1) interactions of particles with matter and (2) individual particle detectors, each section being followed by an annotated bibliography of selected reference materials. Rankings are given to the articles on the…

Selected Bibliography of Educational Materials: Maghreb, Algeria, Libya, Morocco, Tunisia. Vol. 10, No. 2, 1976.

ERIC Educational Resources Information Center

Azzouz, Azzedine, Comp.; And Others

The bibliography contains 92 English language annotations of newspaper articles and government publications about education in selected North African countries. All entries were published during 1976. Organized by country, the bibliography presents sources relating to educational philosophy and theory, educational administration, adult education,…

Selected Bibliography of Egyptian Educational Materials, Vol. 2, No. 1, 1976.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

This selective annotated bibliography of Egyptian publications on education contains 126 entries on 55 topics. Publications include journal articles, books, and government documents published during 1976 or late 1975. Among the 55 topics are the following: adult education, agricultural schools, art education, child upbringing, compulsory…

Recreation and scenic resources in Alaska: an annotated bibliography.

Treesearch

Robert M. Muth; Sally Anne Fitchet

1976-01-01

This bibliography provides descriptions of material published on recreation and scenic resources in Alaska. Included are publications on research and supporting material in the form of studies and reports, proposals, plans, historical and cultural references, bibliographic documents, and popular books and articles describing the resources of Alaska and issues relating...

Guide to Social Science Resources in Women's Studies.

ERIC Educational Resources Information Center

Oakes, Elizabeth H.; Sheldon, Kathleen E.

This annotated bibliography describes the contents and critically evaluates 654 social science books and collections of journal articles in women's studies. The objective is to assist in research and in the organization of undergraduate or graduate courses on women. The resources are presented in nine sections. Section I covers anthropology,…

Refugees and Homeless: Nomads of the World.

ERIC Educational Resources Information Center

Steiner, Stanley F.; Cobiskey, Lane

1998-01-01

The United States has the most homeless people of the industrialized nations, and children are the fastest growing segment of the homeless. This article discusses refugees and homeless persons and presents an annotated bibliography of picture books, fiction, and nonfiction for grades K-12. Suggests class activities in drama, language arts, and…

"The Advance Guard of a New Motion Picture Art": Experimental Cinema, 1930-1933.

ERIC Educational Resources Information Center

Brandon, Thomas

1978-01-01

Ninety-eight articles from the five issues of "Experimental Cinema" are annotated. The magazine appeared from 1930 to 1933 and is credited with stimulating the emergence of world cinema culture in the United States, while demonstrating perceptions of working class interests and even revolutionary projections. (JMF)

Selected Bibliography of Egyptian Educational Materials, Vol. 2, No. 2, 1976.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

One hundred fourteen entries on 58 topics are contained in the selective annotated bibliography of Egyptian publications on education. Included are journal articles, books, and government documents published during 1976. Content includes the following topics: adult education, Arabic language, audiovisual aids, child upbringing, civics, economics…

Selected Bibliography of Egyptian Educational Materials, Vol. 2, No. 4, 1976.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

One hundred seventy entries on 69 topics are contained in the selective annotated bibliography of Egyptian publications on education. Included are journal articles, books, and government documents published during 1976. Content includes the following topics: Arabic language, art education, civics, commercial schools, comparative education,…

Selected Bibliography of Egyptian Educational Materials. Vol. 5, No. 4, 1979.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

This annotated listing cites books, monographs, government publications, and journal articles dealing with education in Egypt. Items cited were published in 1979. The listing is organized by subject area. Subjects include adult education in mosques; anxiety among sportsmen; arabic languages; art education; Azhari institutes; basic education; child…

Selected Bibliography of Egyptian Educational Materials, Vol. 6, No. 1, 1980.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

This annotated listing cites books, monographs, government publications, and journal articles dealing with education in Egypt. Items cited were published in 1980. The listing is organized by subject areas. The subjects include adult education, agricultural education, art education, Azhari institutes, basic education, boyscouting, children's…

Buddhism: A Brief Guide to Reference Sources.

ERIC Educational Resources Information Center

Drost, Jerry

The annotated bibliography lists 48 articles, atlases, dictionaries, bibliographies, and general and subject indexes on Buddhism. The bibliography is intended to provide college students with an introduction to the more complex literature of Buddhism and to stimulate further research and study. Topics include the history of Buddhism; the practice…

Student Disciplinary Issues: A Legal Compendium. Second Edition

ERIC Educational Resources Information Center

Brown, Valerie L., Ed.

This compendium provides an overview of selected codes of student conduct, a selection of annotated legal decisions and important law review articles, and various National Association of College and University Attorney (NACUA) outlines on the issue of student discipline in both academic and nonacademic contexts. Part 1 lists nonacademic codes of…

An Annotated Bibliography of the Literature on Change.

ERIC Educational Resources Information Center

Maguire, Louis M.

This 493-item bibliography covers the gamut of change in society. Emphases are placed on the topics of educational change, innovation research, administrative change, organizational change, and social and political change. The document, divided into three parts, includes 176 books, 191 articles in books, and 126 papers and speeches. Also included…

Emerging Information Literacy and Research-Method Competencies in Urban Community College Psychology Students

ERIC Educational Resources Information Center

Wolfe, Kate S.

2015-01-01

This article details an assignment developed to teach students at urban community colleges information-literacy skills. This annotated bibliography assignment introduces students to library research skills, helps increase information literacy in beginning college students, and helps psychology students learn research methodology crucial in…

Mohandas K. Gandhi and His Experience of Nature.

ERIC Educational Resources Information Center

Power, Shahed

1991-01-01

This article traces the evolution of Gandhi's exemplary relationship with nature through vignettes from his long life. Annotated are the religious roots and the environmental origins of his philosophical development, his contact with vegetarians and theosophists, and his responses to a variety of issues raised by the cohabitation of humans with…

Architectural/Building Programming: An Annotated Bibliography.

ERIC Educational Resources Information Center

Turner, George E.

This 34-item bibliography brings together the random articles about programing, which have appeared in a variety of publications, to establish a resource for architectural students and practitioners who need a clearer understanding of the nature of architectural programing. The entries are divided into those that serve as an introduction to either…

The Minimalist Reading Model: Rethinking Reading Lists in Arts and Education Subjects

ERIC Educational Resources Information Center

Piscioneri, Matthew; Hlavac, Jim

2013-01-01

Despite reading being recognized as a core academic skill, surprisingly little research has been undertaken into university lecture reading requirements. This article reports on the trial and evaluation of a minimalist reading model developed for students in arts and education subjects. Comprising annotated extracts from full texts…

MachineProse: an Ontological Framework for Scientific Assertions

PubMed Central

Dinakarpandian, Deendayal; Lee, Yugyung; Vishwanath, Kartik; Lingambhotla, Rohini

2006-01-01

Objective: The idea of testing a hypothesis is central to the practice of biomedical research. However, the results of testing a hypothesis are published mainly in the form of prose articles. Encoding the results as scientific assertions that are both human and machine readable would greatly enhance the synergistic growth and dissemination of knowledge. Design: We have developed MachineProse (MP), an ontological framework for the concise specification of scientific assertions. MP is based on the idea of an assertion constituting a fundamental unit of knowledge. This is in contrast to current approaches that use discrete concept terms from domain ontologies for annotation and assertions are only inferred heuristically. Measurements: We use illustrative examples to highlight the advantages of MP over the use of the Medical Subject Headings (MeSH) system and keywords in indexing scientific articles. Results: We show how MP makes it possible to carry out semantic annotation of publications that is machine readable and allows for precise search capabilities. In addition, when used by itself, MP serves as a knowledge repository for emerging discoveries. A prototype for proof of concept has been developed that demonstrates the feasibility and novel benefits of MP. As part of the MP framework, we have created an ontology of relationship types with about 100 terms optimized for the representation of scientific assertions. Conclusion: MachineProse is a novel semantic framework that we believe may be used to summarize research findings, annotate biomedical publications, and support sophisticated searches. PMID:16357355

Development of Stitched, Braided and Woven Composite Structures in the ACT Program and at Langley Research Center

NASA Technical Reports Server (NTRS)

Dow, Marvin B.; Dexter, H. Benson

1997-01-01

Summary results are presented from the research conducted on woven, braided, knitted and stitched (textile) composites at the Langley Research Center and under the NASA Advanced Composites Technology (ACT) Program in the period from 1985 to 1997. The report also includes an annotated bibliography of 270 U.S. publications on textile composites (with their abstracts). Two major research areas are discussed: (1) the general research in textile composites performed throughout the period under the direction of the Langley Research Center and (2) the development of textile composite aircraft structures by industry under the NASA ACT Program. The annotated bibliography is organized in three subsections: (1) general textiles R&D under the auspices of Langley, (2) ACT Program development of textile structural components, and (3) textiles research by individuals and organizations not associated with the ACT Program. An author index is provided for the reports and documents.

Manual Gene Ontology annotation workflow at the Mouse Genome Informatics Database

PubMed Central

Drabkin, Harold J.; Blake, Judith A.

2012-01-01

The Mouse Genome Database, the Gene Expression Database and the Mouse Tumor Biology database are integrated components of the Mouse Genome Informatics (MGI) resource (http://www.informatics.jax.org). The MGI system presents both a consensus view and an experimental view of the knowledge concerning the genetics and genomics of the laboratory mouse. From genotype to phenotype, this information resource integrates information about genes, sequences, maps, expression analyses, alleles, strains and mutant phenotypes. Comparative mammalian data are also presented particularly in regards to the use of the mouse as a model for the investigation of molecular and genetic components of human diseases. These data are collected from literature curation as well as downloads of large datasets (SwissProt, LocusLink, etc.). MGI is one of the founding members of the Gene Ontology (GO) and uses the GO for functional annotation of genes. Here, we discuss the workflow associated with manual GO annotation at MGI, from literature collection to display of the annotations. Peer-reviewed literature is collected mostly from a set of journals available electronically. Selected articles are entered into a master bibliography and indexed to one of eight areas of interest such as ‘GO’ or ‘homology’ or ‘phenotype’. Each article is then either indexed to a gene already contained in the database or funneled through a separate nomenclature database to add genes. The master bibliography and associated indexing provide information for various curator-reports such as ‘papers selected for GO that refer to genes with NO GO annotation’. Once indexed, curators who have expertise in appropriate disciplines enter pertinent information. MGI makes use of several controlled vocabularies that ensure uniform data encoding, enable robust analysis and support the construction of complex queries. These vocabularies range from pick-lists to structured vocabularies such as the GO. All data associations are supported with statements of evidence as well as access to source publications. PMID:23110975

Resolving protein structure-function-binding site relationships from a binding site similarity network perspective.

PubMed

Mudgal, Richa; Srinivasan, Narayanaswamy; Chandra, Nagasuma

2017-07-01

Functional annotation is seldom straightforward with complexities arising due to functional divergence in protein families or functional convergence between non-homologous protein families, leading to mis-annotations. An enzyme may contain multiple domains and not all domains may be involved in a given function, adding to the complexity in function annotation. To address this, we use binding site information from bound cognate ligands and catalytic residues, since it can help in resolving fold-function relationships at a finer level and with higher confidence. A comprehensive database of 2,020 fold-function-binding site relationships has been systematically generated. A network-based approach is employed to capture the complexity in these relationships, from which different types of associations are deciphered, that identify versatile protein folds performing diverse functions, same function associated with multiple folds and one-to-one relationships. Binding site similarity networks integrated with fold, function, and ligand similarity information are generated to understand the depth of these relationships. Apart from the observed continuity in the functional site space, network properties of these revealed versatile families with topologically different or dissimilar binding sites and structural families that perform very similar functions. As a case study, subtle changes in the active site of a set of evolutionarily related superfamilies are studied using these networks. Tracing of such similarities in evolutionarily related proteins provide clues into the transition and evolution of protein functions. Insights from this study will be helpful in accurate and reliable functional annotations of uncharacterized proteins, poly-pharmacology, and designing enzymes with new functional capabilities. Proteins 2017; 85:1319-1335. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Money Matters!

ERIC Educational Resources Information Center

Byerly, Greg; Brodie, Carolyn S.

1998-01-01

Presents an annotated bibliography of Web sites, periodicals, and books dealing with money for teachers and students. Features learning about money, using money wisely, the Stock Market, collecting money, calculators, currency converters, shopping online, and shopping for free. Includes a simple budget-planning sheet. (PEN)

Climate Feedback: Bringing the Scientific Community to Provide Direct Feedback on the Credibility of Climate Media Coverage

NASA Astrophysics Data System (ADS)

Vincent, E. M.; Matlock, T.; Westerling, A. L.

2015-12-01

While most scientists recognize climate change as a major societal and environmental issue, social and political will to tackle the problem is still lacking. One of the biggest obstacles is inaccurate reporting or even outright misinformation in climate change coverage that result in the confusion of the general public on the issue.In today's era of instant access to information, what we read online usually falls outside our field of expertise and it is a real challenge to evaluate what is credible. The emerging technology of web annotation could be a game changer as it allows knowledgeable individuals to attach notes to any piece of text of a webpage and to share them with readers who will be able to see the annotations in-context -like comments on a pdf.Here we present the Climate Feedback initiative that is bringing together a community of climate scientists who collectively evaluate the scientific accuracy of influential climate change media coverage. Scientists annotate articles sentence by sentence and assess whether they are consistent with scientific knowledge allowing readers to see where and why the coverage is -or is not- based on science. Scientists also summarize the essence of their critical commentary in the form of a simple article-level overall credibility rating that quickly informs readers about the credibility of the entire piece.Web-annotation allows readers to 'hear' directly from the experts and to sense the consensus in a personal way as one can literaly see how many scientists agree with a given statement. It also allows a broad population of scientists to interact with the media, notably early career scientists.In this talk, we will present results on the impacts annotations have on readers -regarding their evaluation of the trustworthiness of the information they read- and on journalists -regarding their reception of scientists comments.Several dozen scientists have contributed to this effort to date and the system offers potential to scale up as it relies on a crowdsourced process where each scientist only makes small contributions that get aggregated together. The project aims to build a network of scientists with varied expertise and to organize their efforts at a global scale to efficiently peer-review major news coverage on climate.

Parametric inference for biological sequence analysis.

PubMed

Pachter, Lior; Sturmfels, Bernd

2004-11-16

One of the major successes in computational biology has been the unification, by using the graphical model formalism, of a multitude of algorithms for annotating and comparing biological sequences. Graphical models that have been applied to these problems include hidden Markov models for annotation, tree models for phylogenetics, and pair hidden Markov models for alignment. A single algorithm, the sum-product algorithm, solves many of the inference problems that are associated with different statistical models. This article introduces the polytope propagation algorithm for computing the Newton polytope of an observation from a graphical model. This algorithm is a geometric version of the sum-product algorithm and is used to analyze the parametric behavior of maximum a posteriori inference calculations for graphical models.

How to Succeed with Academically Underprepared Students: A Catalog of Successful Practices.

ERIC Educational Resources Information Center

Noel, Lee, Ed.; Levitz, Randi, Ed.

Program descriptions, articles, an annotated bibliography, and a survey report on programs and services for students who are underprepared for college work as freshmen are presented. The survey report considers program design and delivery strategies at about 300 colleges, and the program descriptions concern: advising, basic skills instruction and…

Teenage Television Viewing. Focused Access to Selected Topics (FAST) Bibliography No. 8.

ERIC Educational Resources Information Center

Shermis, Michael

Surveying the television habits of teenagers, this annotated bibliography contains 30 references of articles and papers in the ERIC database. The first section, "Impact on Health, Sexual Behavior, Use of Alcohol," addresses such issues as the relationship of viewing sexual content to sexual activity and sex role acquisition, and relationships…

Review of the Year's Publications for 2008: Social Justice Education

ERIC Educational Resources Information Center

Adams, Maurianne; Brigham, Elaine; Whitlock, Elaine R. Cook; Johnson, Julie

2009-01-01

This article offers an annotated bibliographical review of the preceding year's publications in the field of social justice education. In this Year in Review for 2008 (YIR '08), the authors present the work of two Social Justice Education doctoral students and the editors of "Equity & Excellence in Education (EEE)," who together have…

Current Literature in Family Planning, Number 54.

ERIC Educational Resources Information Center

Planned Parenthood--World Population, New York, NY. Katherine Dexter McCormick Library.

As a monthly classified review of literature, this annotated bibliography offers a selection of books and articles recently received by the Katharine Dexter McCormick Library relative to family planning in the United States. Divided into two parts, the first contains book reviews from a variety of sources. They cover the subjects fund raising,…

Training Materials for Animal Facility Personnel. January 1990-January 1995. Quick Bibliography Series.

ERIC Educational Resources Information Center

Kreger, Michael D.

This annotated bibliography contains 167 citations of training materials for animal facility personnel that were enbtered in the AGRICOLA database between January 1979 and February 1995. Citations of journal articles, books, and audiovisual materials are included. A wide variety of publication types are represented, including the following:…

Role of the Department Chairperson. The Best of ERIC on Educational Management, Number 92.

ERIC Educational Resources Information Center

ERIC Clearinghouse on Educational Management, Eugene, OR.

All the 11 publications in this annotated bibiliography explore the department head's dual role as teacher and instructional leader. Three articles characterize principals' role as managerial and recommend that primary instructional and curriculur responsibilities be delegated to department heads with clearly designated positions in the school's…

Managing the Academic Library Cataloging Department in Changing Times: A State of the Art Bibliography.

ERIC Educational Resources Information Center

Sibley, Brenda Parris

This paper presents an annotated bibliography of articles that provide information on managing the academic library cataloging department. Topics include: hiring tests for technical services support staff; changing roles for professional, paraprofessional staff and support staff; motivating and rewarding cataloging staff; a study of entry level…

Japanese aerospace science and technology 1992. A bibliography with indexes

NASA Technical Reports Server (NTRS)

1993-01-01

This report contains 4271 annotated references to reports and journal articles of Japaness intellectual origin entered into the NASA scientific and technical information system during 1992. Representative subject areas of interest include: adaptive control, antireflection coatings, fiber reinforced composites, gallium arsenide lasers, laser interferometry, reduced gravity (microgravity), and VHSIC (circuits).

Sex Differences and Brain Development: A Bibliography.

ERIC Educational Resources Information Center

Motomatsu, Nancy; Patterson, Bobbie

This bibliography cites references dealing with background material on the functions of the human brain and current research on sex differences in brain development. A list of 10 books published since 1974 is followed by a more extensive annotated bibliography of 29 articles, and a bibliography of 19 reports, complete with ERIC reference numbers…

Reports 6. The Yugoslav Serbo-Croatian-English Contrastive Project.

ERIC Educational Resources Information Center

Filipovic, Rudolf, Ed.

The first part of the sixth volume in this series consists of a 116-item annotated bibliography of American doctoral dissertations in contrastive linguistics. The second part consists of six articles dealing with various aspects of Serbo-Croatian-English contrastive analysis. They are: "A Contrastive Analysis Evaluation of Conversion in English…

Annotated Bibliography of Research in the Teaching of English

ERIC Educational Resources Information Center

Beach, Richard; Bigelow, Martha; Brendler, Beth; Dillon, Deborah; Frederick, Amy; Gabrielli, Michelle; Helman, Lori; Kapoor, Richa; Ngo, Bic; O'Brien, David; Rambow, Adam; Scharber, Cassie; Sethi, Jenna; Liang, Lauren; Braaksma, Martine; Janssen, Tanja

2011-01-01

"Research in the Teaching of English" (RTE) is the flagship research journal of the National Council of Teachers of English (NCTE) in the United States. It is a broad-based, multidisciplinary journal composed of original research articles and short scholarly essays on a wide range of topics significant to those concerned with the…

The New Religions: An Annotated Introductory Bibliography.

ERIC Educational Resources Information Center

Center for the Study of New Religious Movements, Berkeley, CA.

This bibliography is a collection of approximately 100 citations of articles, books, and edited volumes on various aspects of new religious teachings and religious cults. Most of the entries were published between 1970 and 1977, although a few date back to the mid 1960s. Entries are divided into three major sections. Section I, New Religious…

Library Services for Off-Campus and Distance Education. The Second Annotated Bibliography.

ERIC Educational Resources Information Center

Slade, Alexander L.; Kascus, Marie A.

This book provides a record of the literature on library issues pertaining to distance and open learning. It also covers library services for part-time students and remote access to electronic library resources. The bibliography contains references to 518 articles, papers, reports, book chapters, theses, and dissertations, most published after…

Your Children's Values. What Do Parents Need to Know?

ERIC Educational Resources Information Center

Our Children, 1996

1996-01-01

This article discusses the family as source of values, parents as role models, character education, and where to find help. A sidebar describes a leadership training program for students at West High School in Anchorage (Alaska) contributed by Joan Kuersten. An annotated list of resources with publication information and addresses of organizations…

Websites for Primary Sources and Civics Education

ERIC Educational Resources Information Center

Rulli, Daniel

2005-01-01

This article features a list of websites for primary sources and civics education. The World Wide Web has become an excellent source for facsimiles, images, and transcriptions of primary sources. As it would be impossible to provide a comprehensive list of all the sites, this annotated list highlights selective sites that provide access to…

An Annotated List of Disciplines and Sub-Disciplines in the Biological Sciences

ERIC Educational Resources Information Center

McDonald, Brandon

2008-01-01

Biology has become a large and diversified science. Current biological research areas transgress academic and professional boundaries to such a degree that the biological sciences could arguably be referred to as "all encompassing." In this article, the author describes how he compiled information on currently recognised disciplines and…

Promoting Decision-Making Skills by Youth with Disabilities: Health, Education, and Vocational Choices. 2nd Edition. CYDLINE Reviews.

ERIC Educational Resources Information Center

Minnesota Univ., Minneapolis. National Center for Youth with Disabilities.

This annotated bibliography offers background information and resource information on decision-making issues for young adults with chronic conditions. The bibliography includes books, journal articles, booklets, audiotapes, and videotapes. For each item listed in the bibliography, the following information is provided: author; title; source; and…

Job Sharing for Teachers. Bibliographies in Education. No. 79.

ERIC Educational Resources Information Center

Canadian Teachers' Federation, Ottawa (Ontario).

This annotated bibliography focusing on job sharing for teachers contains 37 book citations and 94 journal article citations. While the particular focus was on job sharing for teachers, general works which provide useful information on such arrangements have been included. A special effort was made to include all Canadian references related to job…

Public Relations Programs. The Best of ERIC, Number 36.

ERIC Educational Resources Information Center

ERIC Clearinghouse on Educational Management, Eugene, OR.

This bibliography contains annotations of 11 documents and journal articles covering various aspects of school public relations, including how to start a PR program, how to improve information dissemination and information gathering, the PR aspects of school violence, the role of the school business manager in PR, school publications, the PR…

Looking Up: Multimedia about Space and Flight.

ERIC Educational Resources Information Center

Walter, Virginia A.

1998-01-01

The best CD-ROMs for young people about space and flight exploit the promise of hypermedia to create informative simulations. This article provides an annotated bibliography of CD-ROMs on astronomy and flight for K-12 students; suggests book and Internet connections; and highlights poetry for astronomers, science fiction, a biography of Charles…

Scientists and Engineers in the Federal Government. Personnel Bibliography Series Number 30.

ERIC Educational Resources Information Center

Witham, Frank

Annotations and bibliographic information are provided for reports, journal articles and other documents referring to scientists and engineers received by the U. S. Civil Service Commission library between 1965 and 1969. The documents are classified and reported in the following sections: supply and demand for technical personnel; personnel…

Mad Tea Party Cyclic Partitions

ERIC Educational Resources Information Center

Bekes, Robert; Pedersen, Jean; Shao, Bin

2012-01-01

Martin Gardner's "The Annotated Alice," and Robin Wilson's "Lewis Carroll in Numberland" led the authors to put this article in a fantasy setting. Alice, the March Hare, the Hatter, and the Dormouse describe a straightforward, elementary algorithm for counting the number of ways to fit "n" identical objects into "k" cups arranged in a circle. The…

Science for Society: A Bibliography, Sixth Edition.

ERIC Educational Resources Information Center

Dasbach, Joseph M.

Presented is an annotated bibliography of selected books published from 1972-75 and articles appearing from July 1974 to July 1975 with topics focusing on the interrelationship of humankind, the environment, science, and technology. For students and teachers in the natural and social sciences at both secondary and college levels, the listings are…

Record of Current Educational Publications. Bulletin, 1921, No. 52

ERIC Educational Resources Information Center

Bureau of Education, Department of the Interior, 1922

1922-01-01

The titles included in this classified and annotated list are books and articles selected by the compilers from the current educational literature of the final months of 1921, subsequent to the preparation of Bulletin, 1921, no. 49. Monthly Record of Current Educational Publications, October, 1921. The publications are organized into the following…

Lexical Properties of Slovene Sign Language: A Corpus-Based Study

ERIC Educational Resources Information Center

Vintar, Špela

2015-01-01

Slovene Sign Language (SZJ) has as yet received little attention from linguists. This article presents some basic facts about SZJ, its history, current status, and a description of the Slovene Sign Language Corpus and Pilot Grammar (SIGNOR) project, which compiled and annotated a representative corpus of SZJ. Finally, selected quantitative data…

Just Do It: Resources for Interpretive Planning

ERIC Educational Resources Information Center

Koepler, Jes

2008-01-01

Now that you have finished reading this journal issue and understand what interpretive planning is and when to apply it, how can you get started and just "do" it? This article provides an annotated list of practical handbooks and internet resources that provide guidelines for museum practitioners to engage in interpretive planning at institutions…

Business Ethics. Focused Access to Selected Topics (FAST) Bibliography No. 17.

ERIC Educational Resources Information Center

Shermis, Michael

Addressing the needs of students who choose careers in business, this annotated bibliography contains 30 references of articles and papers in the ERIC database dealing with ethics in business. Sources cited in the first section, "Business Instruction," deal with teaching ethics in business communication, business literature, and other areas of the…

"Twelve Apostles" and a Few Heretics. Historical Paper 1

ERIC Educational Resources Information Center

Shera, Jesse H.

2015-01-01

There is much more to learn from reading the biographical and philosophical writings of leaders in higher education about what education for librarianship was and should be than from the literature of library education itself. This article contains an alphabetical list with annotations of 23 books on exploring the issues and problems of higher…

Selected Bibliography of Egyptian Educational Materials. Vol. 5, No. 2, 1979.

ERIC Educational Resources Information Center

Al-Ahram Center for Scientific Translations, Cairo (Egypt).

One hundred and forty two books, articles, and government publications dealing with education in Egypt are cited in this annotated bibliography. Items cited were published in 1979 and examine education for all age groups and ability levels. The material is presented under 84 headings including adult education, art education, children's books,…

Selected Bibliography of Educational Materials: Maghreb, Algeria, Libya, Morocco, Tunisia. Vol. 10, No. 1, 1976.

ERIC Educational Resources Information Center

Azzouz, Azzedine, Comp.; And Others

Ninety English-language annotations of newspaper articles and government publications about education in five north African countries are contained in this bibliography. Drawing from materials published during the early months of 1976, the bibliography examines all aspects of education in those countries. Organized by country, the bibliography…

Pairing Books for Learning: The Union of Informational and Fiction

ERIC Educational Resources Information Center

Baer, Allison L.

2012-01-01

This article aims to present an annotated bibliography of paired books--one fiction and one informational--about multiple topics in history and social studies that, when read together, can help support students' learning through experiencing the topic from multiple perspectives and voices. It begins with a brief rationale for pairing fiction and…

Management: A continuing literature survey with indexes, 1971

NASA Technical Reports Server (NTRS)

1972-01-01

An annotated bibliography of selected reports, journal articles, and other documents on the subject of management is presented. There are 450 references to documents which were originally announced in the 1971 issues of Scientific and Technical Aerospace Reports (STAR) or International Aerospace Abstracts (IAA). Subject, personal author, and corporate source indexes are included.

Global Journal of Computer Science and Technology. Volume 1.2

ERIC Educational Resources Information Center

Dixit, R. K.

2009-01-01

Articles in this issue of "Global Journal of Computer Science and Technology" include: (1) Input Data Processing Techniques in Intrusion Detection Systems--Short Review (Suhair H. Amer and John A. Hamilton, Jr.); (2) Semantic Annotation of Stock Photography for CBIR Using MPEG-7 standards (R. Balasubramani and V. Kannan); (3) An Experimental Study…

Student Absenteeism: Causes, Effects, and Possible Solutions.

ERIC Educational Resources Information Center

Mervilde, James

Student absenteeism is a major concern for elementary and secondary school educators. This paper annotates 59 articles and reports dealing with the causes of, effects of, and solutions to student absenteeism. A brief glossary first defines l4 terms used in the literature. The author then surveys l4 publications on the causes of absenteeism,…

Developing Social Skills: Issues for Adolescents with Chronic Illnesses and Disabilities. CYDLINE Reviews.

ERIC Educational Resources Information Center

Minnesota Univ., Minneapolis. National Center for Youth with Disabilities.

This collection of annotated bibliographies focuses on the social skills of adolescents, and is drawn from a national database of current programs and literature regarding adolescents with chronic illnesses and other disabilities. Bibliographic materials listed include documents and articles selected from the database of the National Center for…

Buying Your Next (or First) PC: What Matters Now?

ERIC Educational Resources Information Center

Crawford, Walt

1993-01-01

Discussion of factors to consider in purchasing a personal computer covers present and future needs, computing environments, memory, processing performance, disk size, and display quality. Issues such as bundled systems, where and when to purchase, and vendor support are addressed; and an annotated bibliography of 28 recent articles is included.…

Imaginary Play Companion: Annotated Abstract Bibliography. Project No. 93-12.

ERIC Educational Resources Information Center

Kalyan-Masih, Violet; Adams, Janis

This bibliography offers an historical perspective on imaginary play companions with 48 entries dating from 1891 to 1975. Entries, which include journal articles, monographs, and books, draw heavily from child development literature. A list of 10 titles from general literature related to the subject of imaginary companions is also included. The…

Computer-Based Education. The Best of ERIC, June 1976-August 1980.

ERIC Educational Resources Information Center

Hall, Keith A.

This bibliography contains annotations of reports, reviews, conference proceedings, other documents, and journal articles on computer based education (CBE), most of which were derived from a search of the Educational Resources Information Center (ERIC) system. Covering June 1976 through August 1980, this compilation serves as an update to two…