Effects of groundwater levels and headwater wetlands on streamflow in the Charlie Creek basin, Peace River watershed, west-central Florida

USGS Publications Warehouse

Lee, T.M.; Sacks, L.A.; Hughes, J.D.

2010-01-01

The Charlie Creek basin was studied from April 2004 to December 2005 to better understand how groundwater levels in the underlying aquifers and storage and overflow of water from headwater wetlands preserve the streamflows exiting this least-developed tributary basin of the Peace River watershed. The hydrogeologic framework, physical characteristics, and streamflow were described and quantified for five subbasins of the 330-square mile Charlie Creek basin, allowing the contribution of its headwaters area and tributary subbasins to be separately quantified. A MIKE SHE model simulation of the integrated surface-water and groundwater flow processes in the basin was used to simulate daily streamflow observed over 21 months in 2004 and 2005 at five streamflow stations, and to quantify the monthly and annual water budgets for the five subbasins including the changing amount of water stored in wetlands. Groundwater heads were mapped in Zone 2 of the intermediate aquifer system and in the Upper Floridan aquifer, and were used to interpret the location of artesian head conditions in the Charlie Creek basin and its relation to streamflow. Artesian conditions in the intermediate aquifer system induce upward groundwater flow into the surficial aquifer and help sustain base flow which supplies about two-thirds of the streamflow from the Charlie Creek basin. Seepage measurements confirmed seepage inflow to Charlie Creek during the study period. The upper half of the basin, comprised largely of the Upper Charlie Creek subbasin, has lower runoff potential than the lower basin, more storage of runoff in wetlands, and periodically generates no streamflow. Artesian head conditions in the intermediate aquifer system were widespread in the upper half of the Charlie Creek basin, preventing downward leakage from expansive areas of wetlands and enabling them to act as headwaters to Charlie Creek once their storage requirements were met. Currently, the dynamic balance between wetland storage, rainfall-runoff processes, and groundwater-level differences in the upper basin allow it to generate approximately half of the streamflow from the Charlie Creek basin. Therefore, future development in the upper basin that would alter the hydraulic connectivity of wetlands during high flow conditions or expand recharging groundwater conditions could substantially affect streamflow in Charlie Creek. LIDAR (Light detection and ranging) based topographic maps and integrated modeling results were used to quantify the water stored in wetlands and other topographic depressions, and to describe the network of shallow stream channels connecting wetlands to Charlie Creek and its tributaries over distances of several thousand feet. Peak flows at all but one streamflow station were underpredicted in MIKE SHE simulations, possibly because the hydraulics of surface channels connecting wetlands to stream channels were not explicitly simulated in the model. Explicitly simulating the smaller channels connecting wetlands and stream channels should improve the ability of future watershed models to simulate peak flows in streams with headwater wetlands. The runoff potential was greater in the lower half of the Charlie Creek basin than in the upper half, and the streambed of Charlie Creek had greater potential to both directly gain streamflow from groundwater and lose streamflow to groundwater. Charlie Creek is more incised into the surficial aquifer in the lower basin than in the upper basin, and the streambed intersects the top of the intermediate aquifer system at two known locations. Groundwater levels in the intermediate aquifer system varied widely in the lower half of the basin from artesian conditions inducing upward flow toward the surficial aquifer and streams, to recharging conditions allowing downward flow and stream leakage. Recharge areas were greatest in May 2004 when rainfall was at a seasonal low and irrigation pumping was at a seasonal high. Recharge conditions

Geohydrologic framework of the Roswell ground-water basin, Chaves and Eddy Counties, New Mexico

USGS Publications Warehouse

Welder, G.E.

1983-01-01

This report describes the geohydrology of the Roswell ground-water basin and shows the long-term hydrostatic-head changes in the aquifers. The Roswell ground-water basin consists of a carbonate artesian aquifer overlain by a leaky confining bed, which, in turn is overlain by an alluvial water-table aquifer. The water-table aquifer is hydraulically connected to the Pecos River. Ground-water pumpage from about 1,500 wells in the basin was about 378,000 acre-feet in 1978. Irrigation use on about 122,000 acres accounted for 95 percent of that pumpage.

Detecting subtle hydrochemical anomalies with multivariate statistics: an example from homogeneous groundwaters in the Great Artesian Basin, Australia

NASA Astrophysics Data System (ADS)

O'Shea, Bethany; Jankowski, Jerzy

2006-12-01

The major ion composition of Great Artesian Basin groundwater in the lower Namoi River valley is relatively homogeneous in chemical composition. Traditional graphical techniques have been combined with multivariate statistical methods to determine whether subtle differences in the chemical composition of these waters can be delineated. Hierarchical cluster analysis and principal components analysis were successful in delineating minor variations within the groundwaters of the study area that were not visually identified in the graphical techniques applied. Hydrochemical interpretation allowed geochemical processes to be identified in each statistically defined water type and illustrated how these groundwaters differ from one another. Three main geochemical processes were identified in the groundwaters: ion exchange, precipitation, and mixing between waters from different sources. Both statistical methods delineated an anomalous sample suspected of being influenced by magmatic CO2 input. The use of statistical methods to complement traditional graphical techniques for waters appearing homogeneous is emphasized for all investigations of this type. Copyright

Multi-tracer investigation of groundwater residence time in a karstic aquifer: Bitter Lakes National Wildlife Refuge, New Mexico, USA

NASA Astrophysics Data System (ADS)

Land, Lewis; Huff, G. F.

2010-03-01

Several natural and anthropogenic tracers have been used to evaluate groundwater residence time within a karstic limestone aquifer in southeastern New Mexico, USA. Natural groundwater discharge occurs in the lower Pecos Valley from a region of karst springs, wetlands and sinkhole lakes at Bitter Lakes National Wildlife Refuge, on the northeast margin of the Roswell Artesian Basin. The springs and sinkholes are formed in gypsum bedrock that serves as a leaky confining unit for an artesian aquifer in the underlying San Andres limestone. Because wetlands on the Refuge provide habitat for threatened and endangered species, there is concern about the potential for contamination by anthropogenic activity in the aquifer recharge area. Estimates of the time required for groundwater to travel through the artesian aquifer vary widely because of uncertainties regarding karst conduit flow. A better understanding of groundwater residence time is required to make informed decisions about management of water resources and wildlife habitat at Bitter Lakes. Results indicate that the artesian aquifer contains a significant component of water recharged within the last 10-50 years, combined with pre-modern groundwater originating from deeper underlying aquifers, some of which may be indirectly sourced from the high Sacramento Mountains to the west.

Multi-Tracer Investigation of Groundwater Residence Time in a Karstic Aquifer: Bitter Lakes National Wildlife Refuge, New Mexico, USA

NASA Astrophysics Data System (ADS)

Land, L. A.; Huff, R.

2009-12-01

Several natural and anthropogenic tracers are used to evaluate groundwater residence time within the karstic limestone aquifer of the Roswell Artesian Basin, southeastern New Mexico, USA. Natural groundwater discharge occurs in the lower Pecos Valley from a region of karst springs, wetlands and sinkhole lakes at Bitter Lakes National Wildlife Refuge. The springs and sinkholes are formed in gypsum bedrock that serves as a leaky confining unit for an artesian aquifer in the underlying San Andres limestone. Because wetlands on the Refuge provide habitat for a number of threatened and endangered species, Refuge managers have expressed concern about the potential for contamination by anthropogenic activity in the aquifer recharge area. Estimates of the time required for groundwater to travel through the artesian aquifer vary widely because of uncertainties regarding the role of karst conduit flow. A better understanding of groundwater residence time is thus required to make informed decisions about management of water resources and wildlife habitat at Bitter Lakes. Results of tracer investigations indicate that the artesian aquifer contains a significant component of water recharged within the last 10 to 50 years, combined with pre-modern groundwater originating from deeper underlying aquifers, some of which may be indirectly sourced from the high Sacramento Mountains to the west.

Distinct Recruitment and Function of Gab1 and Gab2 in Met Receptor-mediated Epithelial Morphogenesis

PubMed Central

Lock, Lisa S.; Maroun, Christiane R.; Naujokas, Monica A.; Park, Morag

2002-01-01

The Gab family of docking proteins (Gab1 and Gab2) are phosphorylated in response to various cytokines and growth factors. Gab1 acts to diversify the signal downstream from the Met receptor tyrosine kinase through the recruitment of multiple signaling proteins, and is essential for epithelial morphogenesis. To determine whether Gab1 and Gab2 are functionally redundant, we have examined the role of Gab2 in epithelial cells. Both Gab1 and Gab2 are expressed in epithelial cells and localize to cell-cell junctions. However, whereas overexpression of Gab1 promotes a morphogenic response, the overexpression of Gab2 fails to induce this response. We show that Gab2 recruitment to the Met receptor is dependent on the Grb2 adapter protein. In contrast, Gab1 recruitment to Met is both Grb2 dependent and Grb2 independent. The latter requires a novel amino acid sequence present in the Met-binding domain of Gab1 but not Gab2. Mutation of these residues in Gab1 impairs both association with the Met receptor and the ability of Gab1 to promote a morphogenic response, whereas their insertion into Gab2 increases Gab2 association with Met, but does not confer on Gab2 the ability to promote epithelial morphogenesis. We propose that the Grb2-independent recruitment of Gab proteins to Met is necessary but not sufficient to promote epithelial morphogenesis. PMID:12058075

Aquifers in the Sokoto basin, northwestern Nigeria, with a description of the general hydrogeology of the region

USGS Publications Warehouse

Anderson, H.R.; Ogilbee, William

1973-01-01

The Sokoto Basin of northwestern Nigeria lies in the sub-Saharan Sudan belt of west Africa in a zone of savannah-type vegetation. Rainfall, averaging about 30 inches annually in much of the basin, occurs chiefly in a wet season which lasts from May to October. A prolonged dry season extending from October to April is dominated by dusty harmattan winds from the northeast. April and May are the hottest months, when temperatures occasionally reach 105?F. Flow in streams of the Sokoto Basin is mostly overland runoff. Only in a few reaches, fed by ground-water discharge from the sedimentary rocks, are streams perennial. In the River Zamfara basin, ground-water discharge contributes almost 1 inch of the average 3.33 inches of total annual runoff. In the vicinity of Sokoto, the River Rima flows throughout the year sustained by spring discharge from perched ground water in limestone of the Kalambaina Formation. On the crystalline terrane where most of the streams rise, total annual runoff may exceed 5 inches, very little of which is ground-water discharge. The sedimentary rocks of the basin range in age from Cretaceous to Tertiary and are composed mostly of interbedded sand, clay, and some limestone; the beds dip gently toward the northwest. Alluvium of Quaternary age underlies the lowlands of the River Sokoto (now Sokoto) and its principal tributaries. These rocks contain three important artesian aquifers, in addition to regional unconfined ground-water bodies in all the principal outcron areas, and a perched water body in the outcrop of the Kalambaina Formation. Artesian aquifers occur at depth in the Gundumi Formation, the Rima Group, and the Gwandu Formation and are separated from one another by clay beds in the lower part of the Rima Group and the Dange Formation. In outcrop, clay in the Dange Formation also supports the perched water of the Kalambaina Formation. The Gundumi Formation, resting on the basement complex, is composed of varicolored clay, sand, and gravel and attains a thickness of 800 to 1,000 feet in its downdip extensions. Most of the formation is thin bedded and clayey and therefore does not yield large quantities of water to boreholes; the average yield is 2,700 gph (gallons per hour). (All gallons are imperial gallons.) Nevertheless, the upper part of the formation is sandy and more permeable and forms a regional artesian aquifer from which yields of as much as 6,600 gph are obtained from single boreholes. Clay in the lower part of the Rima Group confines the Gundumi aquifer downdip, so that at Rabah and Sokoto, for example, in the River Sokoto fadama (valley floor), artesian flow is found in boreholes screened in the Gundumi. Aquifer tests indicate low transmissivities, ranging from 300 to 5,000 gpd per ft (gallons per day per foot) in the lower part of the Gundumi Formation; but in the upper sandy zone the transmissivities are much higher, reaching 66,000 gpd per ft. In the western part of the Sokoto Basin, more productive aquifers with higher heads usually lie above the Gundumi aquifer so that it is not attractive for development, except in the River Sokoto fadama where artesian flow is possible. The Illo Group, which is in part contemporaneous with the Gundumi Formation, includes interbedded varicolored clay and grit in the southern part of the Sokoto Basin. The upper part of the Illo is known to be water-bearing; however, except for the test borehole at Mungadi, little is known of its subsurface extent and water-yielding potential. Overlying the Gundumi Formation in the central and northern part of the Sokoto Basin are interbedded fine gray sand and dark gray clay of the Wurno and Taloka Formations, separated in the extreme north by clay shale of the Dukamaje Formation. Collectively known as the Rima Group, these sediments attain a thickness of more than 1,000 feet near the Niger border. At depth and downdip the clayey beds practically disappear; the sandy beds become thicker and coar

Carbonate aquifer of the Central Roswell Basin: recharge estimation by numerical modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rehfeldt, K.R.; Gross, G.W.

The flow of ground water in the Roswell, New Mexico, Artesian Basin, has been studied since the early 1900s and varied ideas have been proposed to explain different aspects of the ground water flow system. The purpose of the present study was to delineate the spatial distribution and source, or sources, of recharge to the carbonate aquifer of the central Roswell Basin. A computer model was used to simulate ground water flow in the carbonate aquifer, beneath and west of Roswell and in the Glorieta Sandstone and Yeso Formation west of the carbonate aquifer.

A geochemical and hydrological investigation of groundwater recharge in the Roswell basin of New Mexico: summary of results and updated listing of tritium determinations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gross, G.W.; Hoy, R.N.

Different approaches were used to study recharge and flow patterns in the Roswell, New Mexico, artesian basin. Isotope determination for tritium, deuterium, and oxygen-18 were made as a function of time and space. Observation well levels, springflow, and precipitation were analyzed by stochastic/numerical approaches. Also, a hydrogeologic survey was made of representative springs in the recharge zone on the basin western flank. An updated listing of tritium activity in precipitation, springs, surface runoff, and subsurface water from over 120 sampling sites in the basin covers 117 pages of the report. Substantial deep leakage contributions from the basin western flank mustmore » be included to account for the basin groundwater budget.« less

Gab3-deficient mice exhibit normal development and hematopoiesis and are immunocompetent.

PubMed

Seiffert, Martina; Custodio, Joseph M; Wolf, Ingrid; Harkey, Michael; Liu, Yan; Blattman, Joseph N; Greenberg, Philip D; Rohrschneider, Larry R

2003-04-01

Gab proteins are intracellular scaffolding and docking molecules involved in signaling pathways mediated by various growth factor, cytokine, or antigen receptors. Gab3 has been shown to act downstream of the macrophage colony-stimulating factor receptor, c-Fms, and to be important for macrophage differentiation. To analyze the physiological role of Gab3, we used homologous recombination to generate mice deficient in Gab3. Gab3(-/-) mice develop normally, are visually indistinguishable from their wild-type littermates, and are healthy and fertile. To obtain a detailed expression pattern of Gab3, we generated Gab3-specific monoclonal antibodies. Immunoblotting revealed a predominant expression of Gab3 in lymphocytes and bone marrow-derived macrophages. However, detailed analysis demonstrated that hematopoiesis in mice lacking Gab3 is not impaired and that macrophages develop in normal numbers and exhibit normal function. The lack of Gab3 expression during macrophage differentiation is not compensated for by increased levels of Gab1 or Gab2 mRNA. Furthermore, Gab3-deficient mice have no major immune deficiency in T- and B-lymphocyte responses to protein antigens or during viral infection. In addition, allergic responses in Gab3-deficient mice appeared to be normal. Together, these data demonstrate that loss of Gab3 does not result in detectable defects in normal mouse development, hematopoiesis, or immune system function.

Ground water in Tooele Valley, Tooele County, Utah

USGS Publications Warehouse

Thomas, H.E.

1946-01-01

Tooele Valley is a typical basin of the Basin and Range Province located about 30 miles southwest of Salt Lake City. It is roughly 15 miles long and 10 miles wide and has a population of about 7,000. Bordered on the west by the Stansbury Range, on the east by the Oquirrh Range, and on the south by South Mountain, it opens northward to Great Salt Lake. The bordering mountain ranges are formed by Paleozoic rocks ranging in age from Lower Cambrian to Pennsylvanian but with the Ordovician and Silurian periods unrepresented. There is no sedimentary record of the interval between Pennsylvanian and Tertiary times, and the Tertiary, Quaternary, and Recent sediments are of continental origin. These continental deposits play the dominant role in the ground-water hydrology of the basin, and were mapped and studied in detail. Pleistocene sediments are of major importance because they form the surface rock over most of the area, and give rise to conditions which yield water by artesian flow in the lower part of the valley.The development of the present land forms in this area began with the folding of Paleozoic and probably Mesozoic sediments during the Laramide revolution. The cycle of highland erosion and lowland deposition thus initiated has continued through recurrent uplift along Basin-Range faults to the present day. The principal physiographic subdivisions of the valley were developed as a result of the Basin-Range faulting, which began early in the Tertiary and has continued to Recent times.There are about 1,100 wells in Tooele Valley, about 90 per cent of which yield or have yielded water by artesian flow. Most of them are located in the lower part of the valley below an altitude of 4,400 feet. These wells and many of the springs derive their water from the unconsolidated Quaternary sediments, which include discontinuous, lenticular and commonly elongated bodies of sand, clay, gravel, and boulders of alluvial origin alternating and inter-fingered with lacustrine beds of the same materials which are more regularly stratified and better assorted. The larger springs are intimately related to the bedding planes and faults in the bedrock and alluvial formations. The well assorted sands and gravels deposited along the shore lines of Lake Bonneville are important as recharge areas for the artesian reservoir.

Gab1 Is Modulated by Chronic Hypoxia in Children with Cyanotic Congenital Heart Defect and Its Overexpression Reduces Apoptosis in Rat Neonatal Cardiomyocytes

PubMed Central

Cherif, Myriam; Nakaoka, Yoshikazu; Angelini, Gianni D.; Ghorbel, Mohamed T.

2015-01-01

Gab1 (Grb2 associated binding protein 1) is a member of the scaffolding/docking proteins (Gab1, Gab2, and Gab3). It is required for fibroblast cell survival and maintaining cardiac function. Very little is known about human Gab1 expression in response to chronic hypoxia. The present study examined the hypothesis that hypoxia regulates Gab1 expression in human paediatric myocardium and cultured rat cardiomyocytes. Here we showed that Gab1 is expressed in myocardial tissue in acyanotic and cyanotic children with congenital heart defects. Gab1 protein was upregulated in cyanotic compared to acyanotic hearts suggesting that Gab1 upregulation is a component of the survival program initiated by hypoxia in cyanotic children. The expression of other Gab1 interacting partners was not affected by hypoxia and Gab1 regulation. Additionally, using an in vitro model, we demonstrated that overexpressing Gab1 in neonatal cardiomyocytes, under hypoxic condition, resulted in the reduction of apoptosis suggesting a role for this protein in cardiomyocyte survival. Altogether, our data provide strong evidence that Gab1 is important for heart cell survival following hypoxic stress. PMID:26090437

Ground-water hydrology of the Chad Basin in Bornu and Dikwa Emirates, northeastern Nigeria, with special emphasis on the flow life of the artesian system

USGS Publications Warehouse

Miller, Raymond E.; Johnston, R.H.; Olowu, J.A.I.; Uzoma, J.U.

1968-01-01

Bornu and Dikwa Emirates lie in the Nigerian sector of the Chad Basin, a vast region of interior drainage encompassing about 600,000 square miles of north-central Africa. The report area includes about 25,000 square miles of the basin that lie in Nigeria. Most of the area is a featureless plain that slopes gently northeast and east from the uplands of central Nigeria towards Lake Chad. On its eastern side the lake has one surface outlet which overflows only during exceptionally high stages of the lake. This outlet spills into the channel of Bahr al Ghazal, which in turn drains into the Bod616 depression. Because the lake is shallow, the shoreline fluctuates markedly with high and low stages corresponding to the wet and dry seasons. The semiarid climate of Bornu and Dikwa Emirates is characterized by a long dry season and a short wet season that correspond to seasonal winds. Annual rainfall ranges from 15 inches in the northern part of the area to 32 inches in the southern. The Chad Basin in Dikwa and Bornu Emirates is underlain by interbedded sand and clay, collectively termed the Chad Formation. These alluvial and lactustrine sediments were deposited in or near Lake Chad whet it occupied a much greater area during Pliocene and Pleistocene time. The Chad Formation has a very slight primary dip in the direction of Lake Chad and conforms to the gentle slope of land surface. The known thickness of the formation ranges from a few feet where it overlies bedrock on the periphery of the basin to at least 1,800 feet at Maiduguri; however, its total thickness probably exceeds 2,000 feet in the central part of the basin. Three water-bearing units termed upper, middle, and lower zones occur within the Chad Formation. The upper zone yields water to numerous dug wells throughout the rural areas and also is .the major source of the Maiduguri municipal water .supply. The middle zone yields water from flowing artesian boreholes that have heads ranging from a few feet to 70 feet above land surface throughout a 13,000 square-mile area of the basin in Nigeria. The lower zone also yields water from flowing boreholes ; however, its areal extent has not been proved beyond the environs of Maiduguri. The present investigation is concerned primarily with the middle zone, which is the source of water for some 190 flowing boreholes used as little-watering points in the Nigerian sector of the Chad Basin. The thickness of loads of waterbearing sand in the middle zone ranges from less than 1 foot to 200 feet, and the artesian head ranges from land surface at Maiduguri to 70 feet above land surface at Lake Chad. The depth to the top of the middle zone in the area of flowing boreholes ranges from 500 to 1,250 feet below land surface. The waterbearing properties of the middle zone differ greatly from place to place. Also, the yields of individual flowing boreholes generally range from 50 to 20,000 imperial gallons per hour (gph). On the basis of water availability, the middle zone can be divided as follows : Areas of high-, moderate-, and low-yield artesian aquifer ; areas of low- and moderate-yield subartesian aquifer ; and an area where the yields from boreholes are insignificant or the aquifer is missing. Recommended maximum rates of long-term withdrawal from individual boreholes for the three artesian areas range from 100 to 5,000 gph with boreholes spaced 5 to 10 miles apart. By limiting flows to the recommended maximum rates, the boreholes should continue to flow for at least 30 years. The present average use per borehole (265 gph in 1965) is considerably less than the recommended maximum rates. Recharge to the upper zone occurs in significant but as yet unmeasured quantities, mostly in the vicinity of the major streams. Apparently, however, no significant amount of recharge reaches the middle zone from the Upper zone. Although the middle zone is, in effect, being 'mined' by existing flowing wells, the present (1965) rate of withdrawal i

Gab3 is required for human colorectal cancer cell proliferation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xiang, Shihao; Wang, Na; Hui, Pingping

Here, we focused on the potential function of Gab3, an uncommon Gab family protein, in human colorectal cancer (CRC) cells. We found that Gab3 was only expressed in human colon cancer tissues as well as in established (HCT-116 and HT-29 lines) and primary human CRC cells. It was however absent in normal human colon cancer tissues and in FHC colon epithelial cells. Knockdown of Gab3 by targeted-shRNAs inhibited proliferation of the CRC cells. Reversely, exogenous over-expression of Gab3 promoted CRC cell proliferation. At the signaling level, Gab3 co-precipitated with p85 and SHP2 in CRC cells, which was required for subsequentmore » Akt and Erk activation. Gab3 shRNA knockdown inhibited Akt and Erk activation, yet Gab3 over-expression augmented it. In vivo, HCT-116 xenograft tumor growth in severe combined immune deficient (SCID) mice was suppressed following expressing Gab3 shRNAs. Meanwhile, Akt and Erk activation in Gab3 shRNA-expressing tumors was also largely inhibited. Together, our results suggest that Gab3 expression in CRC cells is important for Akt-Erk activation and cell proliferation. - Highlights: • Gab3 is only expressed in colorectal cancer (CRC) cells, but not in colon epithelial cells. • Gab3 shRNA knockdown inhibits CRC cell proliferation. • Exogenous over-expression of Gab3 promotes HCT-116 cell proliferation. • Gab3 co-precipitates with p85 and SHP2 to mediate Akt and Erk activation in CRC cells. • HCT-116 tumor growth in SCID mice is suppressed with expression of Gab3 shRNAs.« less

Molecular Characterization of Striated Muscle-Specific Gab1 Isoform as a Critical Signal Transducer for Neuregulin-1/ErbB Signaling in Cardiomyocytes

PubMed Central

Yasui, Taku; Masaki, Takeshi; Arita, Yoh; Ishibashi, Tomohiko; Inagaki, Tadakatsu; Okazawa, Makoto; Oka, Toru; Shioyama, Wataru; Yamauchi-Takihara, Keiko; Komuro, Issei; Sakata, Yasushi; Nakaoka, Yoshikazu

2016-01-01

Grb2-associated binder (Gab) docking proteins regulate signals downstream of a variety of growth factors and receptor tyrosine kinases. Neuregulin-1 (NRG-1), a member of epidermal growth factor family, plays a critical role for cardiomyocyte proliferation and prevention of heart failure via ErbB receptors. We previously reported that Gab1 and Gab2 in the myocardium are essential for maintenance of myocardial function in the postnatal heart via transmission of NRG-1/ErbB-signaling through analysis of Gab1/Gab2 cardiomyocyte-specific double knockout mice. In that study, we also found that there is an unknown high-molecular weight (high-MW) Gab1 isoform (120 kDa) expressed exclusively in the heart, in addition to the ubiquitously expressed low-MW (100 kDa) Gab1. However, the high-MW Gab1 has been molecularly ill-defined to date. Here, we identified the high-MW Gab1 as a striated muscle-specific isoform. The high-MW Gab1 has an extra exon encoding 27 amino acid residues between the already-known 3rd and 4th exons of the ubiquitously expressed low-MW Gab1. Expression analysis by RT-PCR and immunostaining with the antibody specific for the high-MW Gab1 demonstrate that the high-MW Gab1 isoform is exclusively expressed in striated muscle including heart and skeletal muscle. The ratio of high-MW Gab1/ total Gab1 mRNAs increased along with heart development. The high-MW Gab1 isoform in heart underwent tyrosine-phosphorylation exclusively after intravenous administration of NRG-1, among several growth factors. Adenovirus-mediated overexpression of the high-MW Gab1 induces more sustained activation of AKT after stimulation with NRG-1 in cardiomyocytes compared with that of β-galactosidase. On the contrary, siRNA-mediated knockdown of the high-MW Gab1 significantly attenuated AKT activation after stimulation with NRG-1 in cardiomyocytes. Taken together, these findings suggest that the striated muscle-specific high-MW isoform of Gab1 has a crucial role for NRG-1/ErbB signaling in cardiomyocytes. PMID:27861634

Molecular Characterization of Striated Muscle-Specific Gab1 Isoform as a Critical Signal Transducer for Neuregulin-1/ErbB Signaling in Cardiomyocytes.

PubMed

Yasui, Taku; Masaki, Takeshi; Arita, Yoh; Ishibashi, Tomohiko; Inagaki, Tadakatsu; Okazawa, Makoto; Oka, Toru; Shioyama, Wataru; Yamauchi-Takihara, Keiko; Komuro, Issei; Sakata, Yasushi; Nakaoka, Yoshikazu

2016-01-01

Grb2-associated binder (Gab) docking proteins regulate signals downstream of a variety of growth factors and receptor tyrosine kinases. Neuregulin-1 (NRG-1), a member of epidermal growth factor family, plays a critical role for cardiomyocyte proliferation and prevention of heart failure via ErbB receptors. We previously reported that Gab1 and Gab2 in the myocardium are essential for maintenance of myocardial function in the postnatal heart via transmission of NRG-1/ErbB-signaling through analysis of Gab1/Gab2 cardiomyocyte-specific double knockout mice. In that study, we also found that there is an unknown high-molecular weight (high-MW) Gab1 isoform (120 kDa) expressed exclusively in the heart, in addition to the ubiquitously expressed low-MW (100 kDa) Gab1. However, the high-MW Gab1 has been molecularly ill-defined to date. Here, we identified the high-MW Gab1 as a striated muscle-specific isoform. The high-MW Gab1 has an extra exon encoding 27 amino acid residues between the already-known 3rd and 4th exons of the ubiquitously expressed low-MW Gab1. Expression analysis by RT-PCR and immunostaining with the antibody specific for the high-MW Gab1 demonstrate that the high-MW Gab1 isoform is exclusively expressed in striated muscle including heart and skeletal muscle. The ratio of high-MW Gab1/ total Gab1 mRNAs increased along with heart development. The high-MW Gab1 isoform in heart underwent tyrosine-phosphorylation exclusively after intravenous administration of NRG-1, among several growth factors. Adenovirus-mediated overexpression of the high-MW Gab1 induces more sustained activation of AKT after stimulation with NRG-1 in cardiomyocytes compared with that of β-galactosidase. On the contrary, siRNA-mediated knockdown of the high-MW Gab1 significantly attenuated AKT activation after stimulation with NRG-1 in cardiomyocytes. Taken together, these findings suggest that the striated muscle-specific high-MW isoform of Gab1 has a crucial role for NRG-1/ErbB signaling in cardiomyocytes.

Water resources of Manatee County, Florida. Water-resources investigations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, D.P.

1983-03-01

Rapid development of Manatee County in southwest Florida is creating water-resource problems. The report presents an evaluation of the water resources and potential effects of water-resource developments. Most streams in the county have small drainage basins and low yields. The principal aquifers are the surficial, minor artesian, and the Floridan. The Floridan aquifer is the major source of irrigation water in the county. The minor artesian aquifer is a highly developed source of water for small rural supplies. Withdrawals of 20 to 50 million gallons per day from the Floridan aquifer since the 1950's have caused declines in the potentiometricmore » surface of about 20 to 50 feet. The quality of ground water is good except in the coastal and southern parts of the county.« less

Gab-family adapter molecules in signal transduction of cytokine and growth factor receptors, and T and B cell antigen receptors.

PubMed

Hibi, M; Hirano, T

2000-04-01

Gab1 and Gab2 (Grb2 associated binder 1 and 2) are scaffolding adapter molecules that display sequence similarity with Drosophila DOS (daughter of sevenless), which is a potential substrate for the protein tyrosine phosphatase, Corkscrew, Both Gab1 and Gab2, like DOS, have a pleckstrin homology domain and potential binding sites for SH2 and SH3 domains. Gab1 and Gab2 are phosphorylated on tyrosine upon the stimulation of various cytokines, growth factors, and antigen receptors, and interact with signaling molecules, such as Grb2, SHP-2, and PI-3 kinase. Overexpression of Gab1 or Gab2 mimics or enhances growth factor or cytokine-mediated biological processes and activates ERK MAP kinase. These data imply that Gab1 and Gab2 act downstream of a broad range of cytokine and growth factor receptors, as well as T and B antigen receptors, and link these receptors to ERK MAP kinase and biological actions.

The role of organic cation transporter 2 inhibitor cimetidine, experimental diabetes mellitus and metformin on gabapentin pharmacokinetics in rats.

PubMed

Benzi, Jhohann Richard de Lima; Yamamoto, Priscila Akemi; Stevens, Jessica Hanna; Baviera, Amanda Martins; de Moraes, Natália Valadares

2018-05-01

We investigated the influence of diabetes mellitus (DM), glycemic control with insulin, cimetidine (Oct2 inhibitor) and metformin (Oct2 substrate) on the kinetic disposition of GAB in rats. Male Wistar rats were divided in five groups and all animals received an oral dose of 50 mg/kg GAB: (vehicle + GAB), cimetidine + GAB (single dose of cimetidine [100 mg/kg] intraperitoneally 1 h before GAB), metformin + GAB (single dose of metformin 100 mg/kg by gavage concomitantly with GAB), DM + GAB (single dose of 40 mg/kg streptozotocin (STZ) intravenously) and DM + GAB + insulin (single dose 40 mg/kg STZ intravenously and 2 IU insulin twice daily for 15 days). Pharmacokinetic analysis was based on plasma and urine data concentrations. No differences in pharmacokinetic parameters were observed between vehicle + GAB × cimetidine + GAB and vehicle + GAB × metformin + GAB groups. Diabetes increased the fraction of GAB excreted unchanged in urine (vehicle + GAB: 0.48 [0.38-0.58]; DM + GAB: 0.83 [0.62-1.04]; DM + GAB + insulin: 0.88 [0.77-0.93]) (mean [95% confidence interval]) without any changes in GAB exposure. Insulin treated diabetic animals showed higher renal clearance compared to control (vehicle + GAB: 0.25 [0.18-0.30] L/h·kg; DM + GAB + insulin: 0.55 [0.45-1.43] L/h·kg), which was attributed to the diabetes-induced glomerular hyperfiltration. Glomerular filtration is the main mechanism of renal excretion of GAB without significant contribution of Oct2 active transport. Copyright © 2018 Elsevier Inc. All rights reserved.

The Gab1 docking protein links the b cell antigen receptor to the phosphatidylinositol 3-kinase/Akt signaling pathway and to the SHP2 tyrosine phosphatase.

PubMed

Ingham, R J; Santos, L; Dang-Lawson, M; Holgado-Madruga, M; Dudek, P; Maroun, C R; Wong, A J; Matsuuchi, L; Gold, M R

2001-04-13

B cell antigen receptor (BCR) signaling causes tyrosine phosphorylation of the Gab1 docking protein. This allows phosphatidylinositol 3-kinase (PI3K) and the SHP2 tyrosine phosphatase to bind to Gab1. In this report, we tested the hypothesis that Gab1 acts as an amplifier of PI3K- and SHP2-dependent signaling in B lymphocytes. By overexpressing Gab1 in the WEHI-231 B cell line, we found that Gab1 can potentiate BCR-induced phosphorylation of Akt, a PI3K-dependent response. Gab1 expression also increased BCR-induced tyrosine phosphorylation of SHP2 as well as the binding of Grb2 to SHP2. We show that the pleckstrin homology (PH) domain of Gab1 is required for BCR-induced phosphorylation of Gab1 and for Gab1 participation in BCR signaling. Moreover, using confocal microscopy, we show that BCR ligation can induce the translocation of Gab1 from the cytosol to the plasma membrane and that this requires the Gab1 PH domain as well as PI3K activity. These findings are consistent with a model in which the binding of the Gab1 PH domain to PI3K-derived lipids brings Gab1 to the plasma membrane, where it can be tyrosine-phosphorylated and then act as an amplifier of BCR signaling.

A Novel Positive Feedback Loop Mediated by the Docking Protein Gab1 and Phosphatidylinositol 3-Kinase in Epidermal Growth Factor Receptor Signaling

PubMed Central

Rodrigues, Gerard A.; Falasca, Marco; Zhang, Zhongtao; Ong, Siew Hwa; Schlessinger, Joseph

2000-01-01

The Gab1 protein is tyrosine phosphorylated in response to various growth factors and serves as a docking protein that recruits a number of downstream signaling proteins, including phosphatidylinositol 3-kinase (PI-3 kinase). To determine the role of Gab1 in signaling via the epidermal growth factor (EGF) receptor (EGFR) we tested the ability of Gab1 to associate with and modulate signaling by this receptor. We show that Gab1 associates with the EGFR in vivo and in vitro via pTyr sites 1068 and 1086 in the carboxy-terminal tail of the receptor and that overexpression of Gab1 potentiates EGF-induced activation of the mitogen-activated protein kinase and Jun kinase signaling pathways. A mutant of Gab1 unable to bind the p85 subunit of PI-3 kinase is defective in potentiating EGFR signaling, confirming a role for PI-3 kinase as a downstream effector of Gab1. Inhibition of PI-3 kinase by a dominant-interfering mutant of p85 or by Wortmannin treatment similarly impairs Gab1-induced enhancement of signaling via the EGFR. The PH domain of Gab1 was shown to bind specifically to phosphatidylinositol 3,4,5-triphosphate [PtdIns(3,4,5)P3], a product of PI-3 kinase, and is required for activation of Gab1-mediated enhancement of EGFR signaling. Moreover, the PH domain mediates Gab1 translocation to the plasma membrane in response to EGF and is required for efficient tyrosine phosphorylation of Gab1 upon EGF stimulation. In addition, overexpression of Gab1 PH domain blocks Gab1 potentiation of EGFR signaling. Finally, expression of the gene for the lipid phosphatase PTEN, which dephosphorylates PtdIns(3,4,5)P3, inhibits EGF signaling and translocation of Gab1 to the plasma membrane. These results reveal a novel positive feedback loop, modulated by PTEN, in which PI-3 kinase functions as both an upstream regulator and a downstream effector of Gab1 in signaling via the EGFR. PMID:10648629

Computational Model of Gab1/2-Dependent VEGFR2 Pathway to Akt Activation

PubMed Central

Tan, Wan Hua; Popel, Aleksander S.; Mac Gabhann, Feilim

2013-01-01

Vascular endothelial growth factor (VEGF) signal transduction is central to angiogenesis in development and in pathological conditions such as cancer, retinopathy and ischemic diseases. However, no detailed mass-action models of VEGF receptor signaling have been developed. We constructed and validated the first computational model of VEGFR2 trafficking and signaling, to study the opposing roles of Gab1 and Gab2 in regulation of Akt phosphorylation in VEGF-stimulated endothelial cells. Trafficking parameters were optimized against 5 previously published in vitro experiments, and the model was validated against six independent published datasets. The model showed agreement at several key nodes, involving scaffolding proteins Gab1, Gab2 and their complexes with Shp2. VEGFR2 recruitment of Gab1 is greater in magnitude, slower, and more sustained than that of Gab2. As Gab2 binds VEGFR2 complexes more transiently than Gab1, VEGFR2 complexes can recycle and continue to participate in other signaling pathways. Correspondingly, the simulation results show a log-linear relationship between a decrease in Akt phosphorylation and Gab1 knockdown while a linear relationship was observed between an increase in Akt phosphorylation and Gab2 knockdown. Global sensitivity analysis demonstrated the importance of initial-concentration ratios of antagonistic molecular species (Gab1/Gab2 and PI3K/Shp2) in determining Akt phosphorylation profiles. It also showed that kinetic parameters responsible for transient Gab2 binding affect the system at specific nodes. This model can be expanded to study multiple signaling contexts and receptor crosstalk and can form a basis for investigation of therapeutic approaches, such as tyrosine kinase inhibitors (TKIs), overexpression of key signaling proteins or knockdown experiments. PMID:23805312

Adapter molecule Grb2-associated binder 1 is specifically expressed in marginal zone B cells and negatively regulates thymus-independent antigen-2 responses.

PubMed

Itoh, Shousaku; Itoh, Motoyuki; Nishida, Keigo; Yamasaki, Satoru; Yoshida, Yuichi; Narimatsu, Masahiro; Park, Sung Joo; Hibi, Masahiko; Ishihara, Katsuhiko; Hirano, Toshio

2002-05-15

Grb2-associated binder 1 (Gab1) is a member of the Gab/daughter of sevenless family of adapter molecules involved in the signal transduction pathways of a variety of growth factors, cytokines, and Ag receptors. To know the role for Gab1 in hematopoiesis and immune responses in vivo, we analyzed radiation chimeras reconstituted with fetal liver (FL) cells of Gab1(-/-) mice, because Gab1(-/-) mice are lethal to embryos. Transfer of Gab1(-/-) FL cells of 14.5 days post-coitum rescued lethally irradiated mice, indicating that Gab1 is not essential for hematopoiesis. Although mature T and B cell subsets developed normally in the peripheral lymphoid organs, reduction of pre-B cells and increase of myeloid cells in the Gab1(-/-) FL chimeras suggested the regulatory roles for Gab1 in hematopoiesis. The chimera showed augmented IgM and IgG1 production to thymus-independent (TI)-2 Ag, although they showed normal responses for thymus-dependent and TI-1 Ags, indicating its negative role specific to TI-2 response. Gab1(-/-) splenic B cells stimulated with anti-delta-dextran plus IL-4 plus IL-5 showed augmented IgM and IgG1 production in vitro that was corrected by the retrovirus-mediated transfection of the wild-type Gab1 gene, clearly demonstrating the cell-autonomous, negative role of Gab1. Furthermore, we showed that the negative role of Gab1 required its Src homology 2-containing tyrosine phosphatase-2 binding sites. Cell fractionation analysis revealed that nonfollicular B cells were responsible for the augmented Ab production in vitro. Consistent with these results, the Gab1 gene was expressed in marginal zone B cells but not follicular B cells. These results indicated that Gab1 is a unique negative regulator specific for TI-2 responses.

Protein tyrosine phosphatase-1B regulates the tyrosine phosphorylation of the adapter Grb2-associated binder 1 (Gab1) in the retina

PubMed Central

2013-01-01

Background Gab1 (Grb2-associated binder 1) is a key coordinator that belongs to the insulin receptor substrate-1 like family of adaptor molecules and is tyrosine phosphorylated in response to various growth factors, cytokines, and numerous other molecules. Tyrosine phosphorylated Gab1 is able to recruit a number of signaling effectors including PI3K, SHP2 and PLC-γ. In this study, we characterized the localization and regulation of tyrosine phosphorylation of Gab1 in the retina. Results Our immuno localization studies suggest that Gab1 is expressed in rod photoreceptor inner segments. We found that hydrogen peroxide activates the tyrosine phosphorylation of Gab1 ex vivo and hydrogen peroxide has been shown to inhibit the protein tyrosine phosphatase PTP1B activity. We found a stable association between the D181A substrate trap mutant of PTP1B and Gab1. Our studies suggest that PTP1B interacts with Gab1 through Tyrosine 83 and this residue may be the major PTP1B target residue on Gab1. We also found that Gab1 undergoes a light-dependent tyrosine phosphorylation and PTP1B regulates the phosphorylation state of Gab1. Consistent with these observations, we found an enhanced Gab1 tyrosine phosphorylation in PTP1B deficient mice and also in retinas treated ex vivo with a PTP1B specific allosteric inhibitor. Conclusions Our laboratory has previously reported that retinas deficient of PTP1B are resistant to light damage compared to wild type mice. Since Gab1 is negatively regulated by PTP1B, a part of the retinal neuroprotective effect we have observed previously in PTP1B deficient mice could be contributed by Gab1 as well. In summary, our data suggest that PTP1B regulates the phosphorylation state of retinal Gab1 in vivo. PMID:23521888

Cardiac Gab1 deletion leads to dilated cardiomyopathy associated with mitochondrial damage and cardiomyocyte apoptosis

PubMed Central

Zhao, J; Yin, M; Deng, H; Jin, F Q; Xu, S; Lu, Y; Mastrangelo, M A; Luo, H; Jin, Z G

2016-01-01

A vital step in the development of heart failure is the transition from compensatory cardiac hypertrophy to decompensated dilated cardiomyopathy (DCM) during cardiac remodeling under mechanical or pathological stress. However, the molecular mechanisms underlying the development of DCM and heart failure remain incompletely understood. In the present study, we investigate whether Gab1, a scaffolding adaptor protein, protects against hemodynamic stress-induced DCM and heat failure. We first observed that the protein levels of Gab1 were markedly reduced in hearts from human patients with DCM and from mice with experimental viral myocarditis in which DCM developed. Next, we generated cardiac-specific Gab1 knockout mice (Gab1-cKO) and found that Gab-cKO mice developed DCM in hemodynamic stress-dependent and age-dependent manners. Under transverse aorta constriction (TAC), Gab1-cKO mice rapidly developed decompensated DCM and heart failure, whereas Gab1 wild-type littermates exhibited adaptive left ventricular hypertrophy without changes in cardiac function. Mechanistically, we showed that Gab1-cKO mouse hearts displayed severe mitochondrial damages and increased cardiomyocyte apoptosis. Loss of cardiac Gab1 in mice impaired Gab1 downstream MAPK signaling pathways in the heart under TAC. Gene profiles further revealed that ablation of Gab1 in heart disrupts the balance of anti- and pro-apoptotic genes in cardiomyocytes. These results demonstrate that cardiomyocyte Gab1 is a critical regulator of the compensatory cardiac response to aging and hemodynamic stress. These findings may provide new mechanistic insights and potential therapeutic target for DCM and heart failure. PMID:26517531

Membrane Targeting of Grb2-associated Binder-1 (Gab1) Scaffolding Protein through Src Myristoylation Sequence Substitutes for Gab1 Pleckstrin Homology Domain and Switches an Epidermal Growth Factor Response to an Invasive Morphogenic Program

PubMed Central

Maroun, Christiane R.; Naujokas, Monica A.; Park, Morag

2003-01-01

The hepatocyte growth factor receptor tyrosine kinase Met promotes cell dissociation and the inherent morphogenic program of epithelial cells. In a search for substrates downstream from Met, we have previously identified the Grb2-associated binder-1 (Gab1) as critical for the morphogenic program. Gab1 is a scaffold protein that acts to diversify the signal downstream from the Met receptor through its ability to couple with multiple signal transduction pathways. Gab1 contains a pleckstrin homology (PH) domain with specificity for phosphatidylinositol 3,4,5-trisphosphate. The phospholipid binding capacity of the Gab1 PH domain is required for the localization of Gab1 at sites of cell-cell contact in colonies of epithelial cells and for epithelial morphogenesis, suggesting that PH domain-dependent subcellular localization of Gab1 is a prerequisite for function. We have investigated the requirement for membrane localization of Gab1 for biological activity. We show that substitution of the Gab1 PH domain with the myristoylation signal from the c-Src protein is sufficient to replace the Gab1 PH domain for epithelial morphogenesis. The membrane targeting of Gab1 enhances Rac activity in the absence of stimulation and switches a nonmorphogenic noninvasive response to epidermal growth factor to a morphogenic invasive program. These results suggest that the subcellular localization of Gab1 is a critical determinant for epithelial morphogenesis and invasiveness. PMID:12686619

Gab-family adapter proteins act downstream of cytokine and growth factor receptors and T- and B-cell antigen receptors.

PubMed

Nishida, K; Yoshida, Y; Itoh, M; Fukada, T; Ohtani, T; Shirogane, T; Atsumi, T; Takahashi-Tezuka, M; Ishihara, K; Hibi, M; Hirano, T

1999-03-15

We previously found that the adapter protein Gab1 (110 kD) is tyrosine-phosphorylated and forms a complex with SHP-2 and PI-3 kinase upon stimulation through either the interleukin-3 receptor (IL-3R) or gp130, the common receptor subunit of IL-6-family cytokines. In this report, we identified another adapter molecule (100 kD) interacting with SHP-2 and PI-3 kinase in response to various stimuli. The molecule displays striking homology to Gab1 at the amino acid level; thus, we named it Gab2. It contains a PH domain, proline-rich sequences, and tyrosine residues that bind to SH2 domains when they are phosphorylated. Gab1 is phosphorylated on tyrosine upon stimulation through the thrombopoietin receptor (TPOR), stem cell factor receptor (SCFR), and T-cell and B-cell antigen receptors (TCR and BCR, respectively), in addition to IL-3R and gp130. Tyrosine phosphorylation of Gab2 was induced by stimulation through gp130, IL-2R, IL-3R, TPOR, SCFR, and TCR. Gab1 and Gab2 were shown to be substrates for SHP-2 in vitro. Overexpression of Gab2 enhanced the gp130 or Src-related kinases-mediated ERK2 activation as that of Gab1 did. These data indicate that Gab-family molecules act as adapters for transmitting various signals.

The absence of Grb2-associated binder 2 (Gab2) does not disrupt NK cell development and functions.

PubMed

Zompi, Simona; Gu, Hahiua; Colucci, Francesco

2004-10-01

Scaffolding molecules bind simultaneously and link together various components of signal-transduction pathways. Grb2-associated binder 2 (Gab2) is a scaffolding protein required for FcgammaR-initiated allergic responses in mast cells and FcgammaR-mediated phagocytosis in macrophages, where it links IgE and IgG receptors to the phosphatidylinositol-3 kinase (PI-3K) pathway. The FcgammaR expressed by natural killer (NK) cells triggers antibody-dependent cellular cytotoxicity (ADCC). We show here that mouse NK cells express Gab2 and that although PI-3K was required for ADCC, this FcgammaR-mediated function was normal in Gab2-/- NK cells. Moreover, NK cell development, spontaneous cytotoxicity, and responses to and production of cytokines were not perturbed in Gab2-/- mice. Considering the striking differences between the signaling requirements of FcgammaR in macrophages and NK cells, our findings suggest that the organization of signal transduction downstream of the same FcR can be cell type-specific. Conversely, Gab family members Gab1, Gab2, and Gab3 may play specific roles in different leukocytes. As pharmacological targeting of Gab2 in mast cells is a potential strategy to treat allergy, our results suggest prudence, as NK cells may participate in IgE-mediated anaphylaxis in a Gab2-independent manner.

Gab2 Phosphorylation by RSK Inhibits Shp2 Recruitment and Cell Motility

PubMed Central

Zhang, Xiaocui; Lavoie, Genevieve; Fort, Loic; Huttlin, Edward L.; Tcherkezian, Joseph; Galan, Jacob A.; Gu, Haihua; Gygi, Steven P.; Carreno, Sebastien

2013-01-01

The scaffolding adapter protein Gab2 (Grb2-associated binder) participates in the signaling response evoked by various growth factors and cytokines. Gab2 is overexpressed in several human malignancies, including breast cancer, and was shown to promote mammary epithelial cell migration. The role of Gab2 in the activation of different signaling pathways is well documented, but less is known regarding the feedback mechanisms responsible for its inactivation. We now demonstrate that activation of the Ras/mitogen-activated protein kinase (MAPK) pathway promotes Gab2 phosphorylation on basic consensus motifs. More specifically, we show that RSK (p90 ribosomal S6 kinase) phosphorylates Gab2 on three conserved residues, both in vivo and in vitro. Mutation of these phosphorylation sites does not alter Gab2 binding to Grb2, but instead, we show that Gab2 phosphorylation inhibits the recruitment of the tyrosine phosphatase Shp2 in response to growth factors. Expression of an unphosphorylatable Gab2 mutant in mammary epithelial cells promotes an invasion-like phenotype and increases cell motility. Taken together, these results suggest that RSK is part of a negative-feedback loop that restricts Gab2-dependent epithelial cell motility. On the basis of the widespread role of Gab2 in receptor signaling, these findings also suggest that RSK plays a regulatory function in diverse receptor systems. PMID:23401857

Osteoblastic molecular scaffold Gab1 is required for maintaining bone homeostasis.

PubMed

Weng, Tujun; Mao, Fengfeng; Wang, Youliang; Sun, Qiang; Li, Ruixin; Yang, Guan; Zhang, Xizheng; Luo, Jincai; Feng, Gen-Sheng; Yang, Xiao

2010-03-01

The Grb2-associated binder 1 (Gab1), which serves as a scaffolding adaptor protein, plays a crucial role in transmitting key signals that control cell growth, differentiation and function from multiple receptors. However, its biological role in osteoblast activity and postnatal bone metabolism remains unclear. To elucidate the in vivo function of Gab1 in postnatal bone remodeling, we generated osteoblast-specific Gab1 knockout mice. Disruption of Gab1 expression in osteoblasts led to decreased trabecular bone mass with a reduced bone formation rate and a decreased bone resorption. Bones from Gab1 mutants also exhibited inferior mechanical properties. Moreover, primary osteoblasts from Gab1 mutant mice demonstrated markedly suppressed osteoblast mineralization, increased susceptibility to apoptosis and decreased expression of receptor activator of NF-kappaB ligand (RANKL). Activation of serine-threonine Akt kinase and extracellular signal-regulated kinase in response to insulin and insulin-like growth factor 1 was attenuated in Gab1 mutant osteoblasts. Our results show that Gab1-mediated signals in osteoblasts are crucial for normal postnatal bone homeostasis.

Recharge in semiarid mountain environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gross, G.W.

A systematic investigation of tritium activity in precipitation, surface water, springs, and ground water of the Roswell artesian basin in New Mexico, has been supplemented by hydrogeologic reconnaissance of spring systems; by various statistical correlations and spectral analysis of stream flow and water level records of observation wells; by spring discharge measurements; by stable isotope determinations (oxygen 18 and deuterium); and by numerical modeling of part of the basin. Two recharge contributions to the Principal or Carbonate Aquifer have been distinguished principally on the basis of their tritium label and aquifer response characteristics. Almost all basin waters (including deep groundmore » water) fall close to the meteoric line of hydrogen/oxygen isotope composition, and this rules out a juvenile origin or appreciable bedrock interaction.« less

Anti-apoptotic Role of Caspase-cleaved GAB1 Adaptor Protein in Hepatocyte Growth Factor/Scatter Factor-MET Receptor Protein Signaling*

PubMed Central

Le Goff, Arnaud; Ji, Zongling; Leclercq, Bérénice; Bourette, Roland P.; Mougel, Alexandra; Guerardel, Cateline; de Launoit, Yvan; Vicogne, Jérôme; Goormachtigh, Gautier; Fafeur, Véronique

2012-01-01

The GRB2-associated binder 1 (GAB1) docking/scaffold protein is a key mediator of the MET-tyrosine kinase receptor activated by hepatocyte growth factor/scatter factor (HGF/SF). Activated MET promotes recruitment and tyrosine phosphorylation of GAB1, which in turn recruits multiple proteins and mediates MET signaling leading to cell survival, motility, and morphogenesis. We previously reported that, without its ligand, MET is a functional caspase target during apoptosis, allowing the generation of a p40-MET fragment that amplifies apoptosis. In this study we established that GAB1 is also a functional caspase target by evidencing a caspase-cleaved p35-GAB1 fragment that contains the MET binding domain. GAB1 is cleaved by caspases before MET, and the resulting p35-GAB1 fragment is phosphorylated by MET upon HGF/SF binding and can interact with a subset of GAB1 partners, PI3K, and GRB2 but not with SHP2. This p35-GAB1 fragment favors cell survival by maintaining HGF/SF-induced MET activation of AKT and by hindering p40-MET pro-apoptotic function. These data demonstrate an anti-apoptotic role of caspase-cleaved GAB1 in HGF/SF-MET signaling. PMID:22915589

Geology and ground-water resources of the Douglas basin, Arizona, with a section on chemical quality of the ground water

USGS Publications Warehouse

Coates, Donald Robert; Cushman, R.L.; Hatchett, James Lawrence

1955-01-01

year period 1947-51, inclusive. Most irrigation wells in the Douglas basin are less than 200 feet in depth and usually produce less than 400 gpm (gallons per minute). The average specific capacity of the wells is about 12 gpm per foot of drawdown. Although water in some parts of the basin is artesian, all irrigation wells must be pumped. Ground water in the basin is generally of excellent to good quality for irrigation use, In small areas along the southern part of Whitewater Draw and east of Douglas the ground water is high in dissolved-solids content. Although most of the water is hard, it is generally satisfactory for domestic use. In many areas the fluoride content is more than 1.5 ppm (parts per million).

The osmotic shock-induced glucose transport pathway in 3T3-L1 adipocytes is mediated by gab-1 and requires Gab-1-associated phosphatidylinositol 3-kinase activity for full activation.

PubMed

Janez, A; Worrall, D S; Imamura, T; Sharma, P M; Olefsky, J M

2000-09-01

Osmotic shock treatment of 3T3-L1 adipocytes causes an increase in glucose transport activity and translocation of GLUT4 protein similar to that elicited by insulin treatment. Insulin stimulation of GLUT4 translocation and glucose transport activity was completely inhibited by wortmannin, however, activation by osmotic shock was only partially blocked. Additionally, we have found that the newly identified insulin receptor substrate Gab-1 (Grb2-associated binder-1) is tyrosine-phosphorylated following sorbitol stimulation. Treatment of cells with the tyrosine kinase inhibitor genistein inhibited osmotic shock-stimulated Gab-1 phosphorylation as well as shock-induced glucose transport. Furthermore, pretreatment with the selective Src family kinase inhibitor PP2 completely inhibited the ability of sorbitol treatment to cause tyrosine phosphorylation of Gab-1. We have also shown that microinjection of anti-Gab-1 antibody inhibits osmotic shock-induced GLUT4 translocation. Furthermore, phosphorylated Gab-1 binds and activates phosphatidylinositol 3-kinase (PI3K) in response to osmotic shock. The PI3K activity associated with Gab-1 was 82% of that associated with anti-phosphotyrosine antibodies, indicating that Gab-1 is the major site for PI3K recruitment following osmotic shock stimulation. Although wortmannin only causes a partial block of osmotic shock-stimulated glucose uptake, wortmannin completely abolishes Gab-1 associated PI3K activity. This suggests that other tyrosine kinase-dependent pathways, in addition to the Gab-1-PI3K pathway, contribute to osmotic shock-mediated glucose transport. To date, Gab-1 is the first protein identified as a member of the osmotic shock signal transduction pathway.

Scaffolding protein Gab1 regulates myeloid dendritic cell migration in allergic asthma

PubMed Central

Zhang, Yun; Xu, Yun; Liu, Shuwan; Guo, Xiaohong; Cen, Dong; Xu, Jiaqi; Li, Heyuan; Li, Kaijun; Zeng, Chunlai; Lu, Linrong; Zhou, Yiting; Shen, Huahao; Cheng, Hongqiang; Zhang, Xue; Ke, Yuehai

2016-01-01

Asthma is a common allergic disorder involving a complex interplay among multiple genetic and environmental factors. Recent studies identified genetic variants of human GAB1 as a novel asthma susceptibility factor. However, the functions of Gab1 in lung remain largely unexplored. In this study, we first observed an elevation of Gab1 level in peripheral blood mononuclear cells from asthmatic patients during acute exacerbation compared with convalescence. Mice with a selectively disrupted Gab1 in myeloid dendritic cells (mDCs) considerably attenuated allergic inflammation in experimental models of asthma. Further investigations revealed a prominent reduction in CCL19-mediated migration of Gab1-deficient mDCs to draining lymph nodes and subsequent impairment of Th2-driven adaptive activation. Mechanistically, Gab1 is an essential component of the CCL19/CCR7 chemokine axis that regulates mDC migration during asthmatic responses. Together, these findings provide the first evidence for the roles of Gab1 in lung, giving us deeper understanding of asthmatic pathogenesis. PMID:27811945

Expression of Gab1 lacking the pleckstrin homology domain is associated with neoplastic progression.

PubMed

Kameda, H; Risinger, J I; Han, B B; Baek, S J; Barrett, J C; Abe, T; Takeuchi, T; Glasgow, W C; Eling, T E

2001-10-01

An in vitro transformation system of carcinogen-treated Syrian hamster embryo (SHE) cell cultures represents multistep genetic and nongenetic changes that develop during the neoplastic progression of normal cells to tumor cells in vivo. During this neoplastic progression, SHE cells demonstrate an altered response to epidermal growth factor (EGF). In the present report, we examined the role of the adapter protein Gab1 (Grb2-associated binder-1) in the neoplastic progression of SHE cells. We used two asbestos-transformed SHE cell clones in different neoplastic stages: a 10W+8 clone, which is immortal and retains the ability to suppress the tumorigenicity of tumor cells in cell-cell hybrid experiments, and a 10W-1 clone, which has lost this tumor suppressor ability. 10W+8 cells expressed full-length 100-kDa Gab1 and associated 5.2-kb mRNA. Upon repeated cell passaging, 10W-1 cells showed increasing expression of a novel 87-kDa form of Gab1 as well as 4.6-kb mRNA with diminishing expression of the original 100-kDa Gab1. cDNA encoding the 87-kDa Gab1 predicts a form of Gab1 lacking the amino-terminal 103 amino acids (Gab1(Delta1-103)), which corresponds to loss of most of the pleckstrin homology (PH) domain. Gab1(Delta1-103) retains the ability to be phosphorylated in an EGF-dependent manner and to associate with the EGF receptor and SHP-2 upon EGF stimulation. The endogenous expression of Gab1(Delta1-103) in 10W-1 cells appeared closely related to EGF-dependent colony formation in soft agar. Moreover, transfection and expression of Gab1(Delta1-103), but not Gab1, in 10W+8 cells enhanced their EGF-dependent colony formation in soft agar. These results demonstrate that Gab1 is a target of carcinogen-induced transformation of SHE cells and that the expression of a Gab1 variant lacking most of the PH domain plays a specific role in the neoplastic progression of SHE cells.

Characterization of GAB1 Expression Over the Menstrual Cycle in Women With and Without Polycystic Ovarian Syndrome Provides a New Insight Into Its Pathophysiology

PubMed Central

Roemer, K. L.; Young, S. L.

2014-01-01

Context: In a previous microarray analysis, GRB2-associated binding protein 1 (GAB1), a docking protein closely related to the insulin receptor substrate, was down-regulated in endometrium of women with polycystic ovary syndrome (PCOS). Objective: The objective of the study was to characterize the cyclic expression of endometrial GAB1 in vivo in normal women and those with PCOS as well as investigate the possible mechanisms of endometrial regulation of GAB1 expression and action in vitro. Design: This was an experimental and case-control study. Setting: The study was conducted at a tertiary university hospital. Patients: Normal proven fertile women (controls; n = 31) and women with PCOS (cases; n = 26) participated in the study. Interventions: Interventions included timed endometrial biopsies at different phases of the menstrual cycle. Ishikawa cells were cultured with β-estradiol (E2), medroxyprogesterone acetate, and E2 + medroxyprogesterone acetate. Transfection of small interfering RNA for GAB1 in Ishikawa cells incubated with or without insulin. Main Outcome Measures: GAB1 mRNA expression in Ishikawa cells and in endometrium of cases and controls was measured. Protein expression of phosphorylated MAPK by Western blot was also measured. Immunohistochemical localization and expression of phosphorylated GAB1 in endometrium was also measured, using a digital histological score. Results: In endometrial tissue, GAB1 mRNA was reduced in the proliferative phase of PCOS women, compared with controls (P = .003; ANOVA). When all the phases of the menstrual cycle were grouped, GAB1 protein expression was reduced in endometrium of PCOS women (P < .0001; Student t test). E2 increases GAB1 mRNA expression in Ishikawa cells (P = .001; ANOVA). Phosphorylated MAPK is reduced in cells transfected with small interfering RNA for GAB1 (P = .008; ANOVA) and incubated with insulin. Conclusions: GAB1 mRNA expression is positively modulated by E2. Endometrial GAB1 protein and mRNA expression are reduced in women with PCOS, suggesting that the endometrium of PCOS women have a defect in insulin signaling due to GAB1 down-regulation. PMID:25144631

PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation

DOE PAGES

Wu, Rui; Sanishvili, Ruslan; Belitsky, Boris R.; ...

2017-03-27

Here, the Bacillus subtilis protein regulator of the gabTD operon and its own gene (GabR) is a transcriptional activator that regulates transcription of gamma-aminobutyric acid aminotransferase (GABA-AT; GabT) upon interactions with pyridoxal-5'-phosphate (PLP) and GABA, and thereby promotes the biosynthesis of glutamate from GABA. We show here that the external aldimine formed between PLP and GABA is apparently responsible for triggering the GabR-mediated transcription activation. Details of the "active site" in the structure of the GabR effector-binding/oligomerization (Eb/O) domain suggest that binding a monocarboxylic.-amino acid such as GABA should be preferred over dicarboxylic acid ligands. A reactive GABA analog, (S)-4-amino-5-fluoropentanoicmore » acid (AFPA), was used as a molecular probe to examine the reactivity of PLP in both GabR and a homologous aspartate aminotransferase (Asp-AT) from Escherichia coli as a control. A comparison between the structures of the Eb/O-PLP-AFPA complex and Asp-AT-PLP-AFPA complex revealed that GabR is incapable of facilitating further steps of the transamination reaction after the formation of the external aldimine. Results of in vitro and in vivo assays using full-length GabR support the conclusion that AFPA is an agonistic ligand capable of triggering GabR-mediated transcription activation via formation of an external aldimine with PLP.« less

PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu, Rui; Sanishvili, Ruslan; Belitsky, Boris R.

Here, the Bacillus subtilis protein regulator of the gabTD operon and its own gene (GabR) is a transcriptional activator that regulates transcription of gamma-aminobutyric acid aminotransferase (GABA-AT; GabT) upon interactions with pyridoxal-5'-phosphate (PLP) and GABA, and thereby promotes the biosynthesis of glutamate from GABA. We show here that the external aldimine formed between PLP and GABA is apparently responsible for triggering the GabR-mediated transcription activation. Details of the "active site" in the structure of the GabR effector-binding/oligomerization (Eb/O) domain suggest that binding a monocarboxylic.-amino acid such as GABA should be preferred over dicarboxylic acid ligands. A reactive GABA analog, (S)-4-amino-5-fluoropentanoicmore » acid (AFPA), was used as a molecular probe to examine the reactivity of PLP in both GabR and a homologous aspartate aminotransferase (Asp-AT) from Escherichia coli as a control. A comparison between the structures of the Eb/O-PLP-AFPA complex and Asp-AT-PLP-AFPA complex revealed that GabR is incapable of facilitating further steps of the transamination reaction after the formation of the external aldimine. Results of in vitro and in vivo assays using full-length GabR support the conclusion that AFPA is an agonistic ligand capable of triggering GabR-mediated transcription activation via formation of an external aldimine with PLP.« less

The docking protein Gab1 is the primary mediator of EGF-stimulated activation of the PI-3K/Akt cell survival pathway

PubMed Central

Mattoon, Dawn R; Lamothe, Betty; Lax, Irit; Schlessinger, Joseph

2004-01-01

Background Gab1 is a docking protein that recruits phosphatidylinositol-3 kinase (PI-3 kinase) and other effector proteins in response to the activation of many receptor tyrosine kinases (RTKs). As the autophosphorylation sites on EGF-receptor (EGFR) do not include canonical PI-3 kinase binding sites, it is thought that EGF stimulation of PI-3 kinase and its downstream effector Akt is mediated by an indirect mechanism. Results We used fibroblasts isolated from Gab1-/- mouse embryos to explore the mechanism of EGF stimulation of the PI-3 kinase/Akt anti-apoptotic cell signaling pathway. We demonstrate that Gab1 is essential for EGF stimulation of PI-3 kinase and Akt in these cells and that these responses are mediated by complex formation between p85, the regulatory subunit of PI-3 kinase, and three canonical tyrosine phosphorylation sites on Gab1. Furthermore, complex formation between Gab1 and the protein tyrosine phosphatase Shp2 negatively regulates Gab1 mediated PI-3 kinase and Akt activation following EGF-receptor stimulation. We also demonstrate that tyrosine phosphorylation of ErbB3 may lead to recruitment and activation of PI-3 kinase and Akt in Gab1-/- MEFs. Conclusions The primary mechanism of EGF-induced stimulation of the PI-3 kinase/Akt anti-apoptotic pathway occurs via the docking protein Gab1. However, in cells expressing ErbB3, EGF and neuroregulin can stimulate PI-3 kinase and Akt activation in a Gab1-dependent or Gab1-independent manner. PMID:15550174

The Gab1 protein is a docking site for multiple proteins involved in signaling by the B cell antigen receptor.

PubMed

Ingham, R J; Holgado-Madruga, M; Siu, C; Wong, A J; Gold, M R

1998-11-13

Gab1 is a member of the docking/scaffolding protein family which includes IRS-1, IRS-2, c-Cbl, p130(cas), and p62(dok). These proteins contain a variety of protein-protein interaction motifs including multiple tyrosine residues that when phosphorylated can act as binding sites for Src homology 2 (SH2) domain-containing signaling proteins. We show in the RAMOS human B cell line that Gab1 is tyrosine-phosphorylated in response to B cell antigen receptor (BCR) engagement. Moreover, tyrosine phosphorylation of Gab1 correlated with the binding of several SH2-containing signaling proteins to Gab1 including Shc, Grb2, phosphatidylinositol 3-kinase, and the SHP-2 tyrosine phosphatase. Far Western analysis showed that the SH2 domains of Shc, SHP-2, and the p85 subunit of phosphatidylinositol 3-kinase could bind directly to tyrosine-phosphorylated Gab1 isolated from activated RAMOS cells. In contrast, the Grb2 SH2 domain did not bind directly to Gab1 but instead to the Shc and SHP-2 associated with Gab1. We also show that Gab1 is present in the membrane-enriched particulate fraction of RAMOS cells and that Gab1/signaling protein complexes are found in this fraction after BCR engagement. Thus, tyrosine-phosphorylated Gab1 may recruit cytosolic signaling proteins to cellular membranes where they can act on membrane-bound targets. This may be a critical step in the activation of multiple BCR signaling pathways.

Roles of cell-cell adhesion-dependent tyrosine phosphorylation of Gab-1.

PubMed

Shinohara, M; Kodama, A; Matozaki, T; Fukuhara, A; Tachibana, K; Nakanishi, H; Takai, Y

2001-06-01

Gab-1 is a multiple docking protein that is tyrosine phosphorylated by receptor tyrosine kinases such as c-Met, hepatocyte growth factor/scatter factor receptor, and epidermal growth factor receptor. We have now demonstrated that cell-cell adhesion also induces marked tyrosine phosphorylation of Gab-1 and that disruption of cell-cell adhesion results in its dephosphorylation. An anti-E-cadherin antibody decreased cell-cell adhesion-dependent tyrosine phosphorylation of Gab-1, whereas the expression of E-cadherin specifically induced tyrosine phosphorylation of Gab-1. A relatively selective inhibitor of Src family kinases reduced cell-cell adhesion-dependent tyrosine phosphorylation of Gab-1, whereas expression of a dominant-negative mutant of Csk increased it. Disruption of cell-cell adhesion, which reduced tyrosine phosphorylation of Gab-1, also reduced the activation of mitogen-activated protein kinase and Akt in response to cell-cell adhesion. These results indicate that E-cadherin-mediated cell-cell adhesion induces tyrosine phosphorylation by a Src family kinase of Gab-1, thereby regulating the activation of Ras/MAP kinase and phosphatidylinositol 3-kinase/Akt cascades.

Role of Gab1 in Heart, Placenta, and Skin Development and Growth Factor- and Cytokine-Induced Extracellular Signal-Regulated Kinase Mitogen-Activated Protein Kinase Activation

PubMed Central

Itoh, Motoyuki; Yoshida, Yuichi; Nishida, Keigo; Narimatsu, Masahiro; Hibi, Masahiko; Hirano, Toshio

2000-01-01

Gab1 is a member of the Gab/DOS (Daughter of Sevenless) family of adapter molecules, which contain a pleckstrin homology (PH) domain and potential binding sites for SH2 and SH3 domains. Gab1 is tyrosine phosphorylated upon stimulation of various cytokines, growth factors, and antigen receptors in cell lines and interacts with signaling molecules, such as SHP-2 and phosphatidylinositol 3-kinase, although its biological roles have not yet been established. To reveal the functions of Gab1 in vivo, we generated mice lacking Gab1 by gene targeting. Gab1-deficient embryos died in utero and displayed developmental defects in the heart, placenta, and skin, which were similar to phenotypes observed in mice lacking signals of the hepatocyte growth factor/scatter factor, platelet-derived growth factor, and epidermal growth factor pathways. Consistent with these observations, extracellular signal-regulated kinase mitogen-activated protein (ERK MAP) kinases were activated at much lower levels in cells from Gab1-deficient embryos in response to these growth factors or to stimulation of the cytokine receptor gp130. These results indicate that Gab1 is a common player in a broad range of growth factor and cytokine signaling pathways linking ERK MAP kinase activation. PMID:10779359

Met receptor tyrosine kinase signals through a cortactin–Gab1 scaffold complex, to mediate invadopodia

PubMed Central

Rajadurai, Charles V.; Havrylov, Serhiy; Zaoui, Kossay; Vaillancourt, Richard; Stuible, Matthew; Naujokas, Monica; Zuo, Dongmei; Tremblay, Michel L.; Park, Morag

2012-01-01

Summary Invasive carcinoma cells form actin-rich matrix-degrading protrusions called invadopodia. These structures resemble podosomes produced by some normal cells and play a crucial role in extracellular matrix remodeling. In cancer, formation of invadopodia is strongly associated with invasive potential. Although deregulated signals from the receptor tyrosine kinase Met (also known as hepatocyte growth factor are linked to cancer metastasis and poor prognosis, its role in invadopodia formation is not known. Here we show that stimulation of breast cancer cells with the ligand for Met, hepatocyte growth factor, promotes invadopodia formation, and in aggressive gastric tumor cells where Met is amplified, invadopodia formation is dependent on Met activity. Using both GRB2-associated-binding protein 1 (Gab1)-null fibroblasts and specific knockdown of Gab1 in tumor cells we show that Met-mediated invadopodia formation and cell invasion requires the scaffold protein Gab1. By a structure–function approach, we demonstrate that two proline-rich motifs (P4/5) within Gab1 are essential for invadopodia formation. We identify the actin regulatory protein, cortactin, as a direct interaction partner for Gab1 and show that a Gab1–cortactin interaction is dependent on the SH3 domain of cortactin and the integrity of the P4/5 region of Gab1. Both cortactin and Gab1 localize to invadopodia rosettes in Met-transformed cells and the specific uncoupling of cortactin from Gab1 abrogates invadopodia biogenesis and cell invasion downstream from the Met receptor tyrosine kinase. Met localizes to invadopodia along with cortactin and promotes phosphorylation of cortactin. These findings provide insights into the molecular mechanisms of invadopodia formation and identify Gab1 as a scaffold protein involved in this process. PMID:22366451

ROLE OF GRB2-ASSOCIATED BINDER 1 (GAB1) IN EPIDERMAL GROWTH FACTOR RECEPTOR (EGFR)-INDUCED SIGNALING IN HEAD AND NECK SQUAMOUS CELL CARCINOMA

PubMed Central

Hoeben, A.; Martin, D.; Clement, P. M.; Cools, J.; Gutkind, J. S.

2012-01-01

The Epidermal Growth Factor Receptor (EGFR) plays an important role in the pathogenesis of head and neck squamous cell carcinoma (HNSCC). Despite the high expression of EGFR in HNSCC, EGFR inhibitors have only limited success as monotherapy. The Grb2-associated binder (GAB) family of adaptor proteins acts as docking/scaffolding molecules downstream of tyrosine kinase receptors. We hypothesized that GAB1 may amplify EGFR-induced signaling in HNSCCs and therefore could play a role in the reduced sensitivity of HNSCC to EGFR inhibitors. We used representative human HNSCC cell lines overexpressing wild type EGFR, and expressing GAB1 but not GAB2. We demonstrated that baseline Akt and MAPK signaling were reduced in HNSCC cells in which GAB1 expression was reduced. Furthermore, the maximal EGF-induced activation of the Akt and MAPK pathway was reduced and delayed, and the duration of the EGF-induced activation of these pathways was reduced in cells with GAB1 knock-down. In agreement with this, HNSCC cells in which GAB1 levels were reduced showed an increased sensitivity to the EGFR inhibitor gefitinib. Our work demonstrates that GAB1 plays an important role as part of the mechanism of by which EGFR induces induced activation of the MAPK and AKT pathway. Our results identify GAB1 as an amplifier of the EGFR-initiated signaling, which may also interfere with EGFR degradation. These findings support the emerging notion that reducing GAB1 function may sensitize HNSCC to EGFR inhibitors, hence representing a new therapeutic target HNSCC treatment in combination with EGFR targeting agents. PMID:22865653

PECAM1 regulates flow-mediated Gab1 tyrosine phosphorylation and signaling

PubMed Central

Xu, Suowen; Ha, Chang Hoon; Wang, Weiye; Xu, Xiangbin; Yin, Meimei; Jin, Felix Q.; Mastrangelo, Michael; Koroleva, Marina; Fujiwara, Keigi; Jin, Zheng Gen

2016-01-01

Endothelial dysfunction, characterized by impaired activation of endothelial nitric oxide (NO) synthase (eNOS) and ensued decrease of NO production, is a common mechanism of various cardiovascular pathologies, including hypertension and atherosclerosis. Laminar blood flow-mediated specific signaling cascades modulate vascular endothelial cells (ECs) structure and functions. We have previously shown that flow-stimulated Gab1 (Grb2-associated binder-1) tyrosine phosphorylation mediates eNOS activation in ECs, which in part confers laminar flow atheroprotective action. However, the molecular mechanisms whereby flow regulates Gab1 tyrosine phosphorylation and its downstream signaling events remain unclear. Here we show that platelet endothelial cell adhesion molecule-1 (PECAM1), a key molecule in an endothelial mechanosensing complex, specifically mediates Gab1 tyrosine phosphorylation and its downstream Akt and eNOS activation in ECs upon flow rather than hepatocyte growth factor (HGF) stimulation. Small interfering RNA (siRNA) targeting PECAM1 abolished flow- but not HGF-induced Gab1 tyrosine phosphorylation and Akt, eNOS activation as well as Gab1 membrane translocation. Protein-tyrosine phosphatase SHP2, which has been shown to interact with Gab1, was involved in flow signaling and HGF signaling, as SHP2 siRNA diminished the flow- and HGF-induced Gab1 tyrosine phosphorylation, membrane localization and downstream signaling. Pharmacological inhibition of PI3K decreased flow-, but not HGF-mediated Gab1 phosphorylation and membrane localization as well as eNOS activation. Finally, we observed that flow-mediated Gab1 and eNOS phosphorylation in vivo induced by voluntary wheel running was reduced in PECAM1 knockout mice. These results demonstrate a specific role of PECAM1 in flow-mediated Gab1 tyrosine phosphorylation and eNOS signaling in ECs. PMID:26706435

Extracellular plant DNA in Geneva groundwater and traditional artesian drinking water fountains.

PubMed

Poté, John; Mavingui, Patrick; Navarro, Elisabeth; Rosselli, Walter; Wildi, Walter; Simonet, Pascal; Vogel, Timothy M

2009-04-01

DNA, as the signature of life, has been extensively studied in a wide range of environments. While DNA analysis has become central to work on natural gene exchange, forensic analyses, soil bioremediation, genetically modified organisms, exobiology, and palaeontology, fundamental questions about DNA resistance to degradation remain. This paper investigated on the presence of plant DNA in groundwater and artesian fountain (groundwater-fed) samples, which relates to the movement and persistence of DNA in the environment. The study was performed in the groundwater and in the fountains, which are considered as a traditional artesian drinking water in Geneva Champagne Basin. DNA from water samples was extracted, analysed and quantified. Plant gene sequences were detected using PCR amplification based on 18S rRNA gene primers specific for eukaryotes. Physicochemical parameters of water samples including temperature, pH, conductivity, organic matter, dissolved organic carbon (DOC) and total organic carbon (TOC) were measured throughout the study. The results revealed that important quantities of plant DNA can be found in the groundwater. PCR amplification based on 18S rDNA, cloning, RFLP analysis and sequencing demonstrated the presence of plant DNA including Vitis rupestris, Vitis berlandieri, Polygonum sp. Soltis, Boopis graminea, and Sinapis alba in the water samples. Our observations support the notion of plant DNA release, long-term persistence and movement in the unsaturated medium as well as in groundwater aquifers.

Gab1 Acts as an Adapter Molecule Linking the Cytokine Receptor gp130 to ERK Mitogen-Activated Protein Kinase

PubMed Central

Takahashi-Tezuka, Mariko; Yoshida, Yuichi; Fukada, Toshiyuki; Ohtani, Takuya; Yamanaka, Yojiro; Nishida, Keigo; Nakajima, Koichi; Hibi, Masahiko; Hirano, Toshio

1998-01-01

Gab1 has structural similarities with Drosophila DOS (daughter of sevenless), which is a substrate of the protein tyrosine phosphatase Corkscrew. Both Gab1 and DOS have a pleckstrin homology domain and tyrosine residues, potential binding sites for various SH2 domain-containing adapter molecules when they are phosphorylated. We found that Gab1 was tyrosine phosphorylated in response to various cytokines, such as interleukin-6 (IL-6), IL-3, alpha interferon (IFN-α), and IFN-γ. Upon the stimulation of IL-6 or IL-3, Gab1 was found to form a complex with phosphatidylinositol (PI)-3 kinase and SHP-2, a homolog of Corkscrew. Mutational analysis of gp130, the common subunit of IL-6 family cytokine receptors, revealed that neither tyrosine residues of gp130 nor its carboxy terminus was required for tyrosine phosphorylation of Gab1. Expression of Gab1 enhanced gp130-dependent mitogen-activated protein (MAP) kinase ERK2 activation. A mutation of tyrosine 759, the SHP-2 binding site of gp130, abrogated the interactions of Gab1 with SHP-2 and PI-3 kinase as well as ERK2 activation. Furthermore, ERK2 activation was inhibited by a dominant negative p85 PI-3 kinase, wortmannin, or a dominant negative Ras. These observations suggest that Gab1 acts as an adapter molecule in transmitting signals to ERK MAP kinase for the cytokine receptor gp130 and that SHP-2, PI-3 kinase, and Ras are involved in Gab1-mediated ERK activation. PMID:9632795

The Scaffolding Protein, Grb2-associated Binder-1, in Skeletal Muscles and Terminal Schwann Cells Regulates Postnatal Neuromuscular Synapse Maturation

PubMed Central

Park, So Young; Jang, So Young; Shin, Yoon Kyoung; Jung, Dong Keun; Yoon, Byeol A; Kim, Jong Kook; Jo, Young Rae; Lee, Hye Jeong

2017-01-01

The vertebrate neuromuscular junction (NMJ) is considered as a “tripartite synapse” consisting of a motor axon terminal, a muscle endplate, and terminal Schwann cells that envelope the motor axon terminal. The neuregulin 1 (NRG1)-ErbB2 signaling pathway plays an important role in the development of the NMJ. We previously showed that Grb2-associated binder 1 (Gab1), a scaffolding mediator of receptor tyrosine kinase signaling, is required for NRG1-induced peripheral nerve myelination. Here, we determined the role of Gab1 in the development of the NMJ using muscle-specific conditional Gab1 knockout mice. The mutant mice showed delayed postnatal maturation of the NMJ. Furthermore, the selective loss of the gab1 gene in terminal Schwann cells produced delayed synaptic elimination with abnormal morphology of the motor endplate, suggesting that Gab1 in both muscles and terminal Schwann cells is required for proper NMJ development. Gab1 in terminal Schwann cells appeared to regulate the number and process elongation of terminal Schwann cells during synaptic elimination. However, Gab2 knockout mice did not show any defects in the development of the NMJ. Considering the role of Gab1 in postnatal peripheral nerve myelination, our findings suggest that Gab1 is a pleiotropic and important component of NRG1 signals during postnatal development of the peripheral neuromuscular system. PMID:28680299

The Scaffolding Protein, Grb2-associated Binder-1, in Skeletal Muscles and Terminal Schwann Cells Regulates Postnatal Neuromuscular Synapse Maturation.

PubMed

Park, So Young; Jang, So Young; Shin, Yoon Kyoung; Jung, Dong Keun; Yoon, Byeol A; Kim, Jong Kook; Jo, Young Rae; Lee, Hye Jeong; Park, Hwan Tae

2017-06-01

The vertebrate neuromuscular junction (NMJ) is considered as a "tripartite synapse" consisting of a motor axon terminal, a muscle endplate, and terminal Schwann cells that envelope the motor axon terminal. The neuregulin 1 (NRG1)-ErbB2 signaling pathway plays an important role in the development of the NMJ. We previously showed that Grb2-associated binder 1 (Gab1), a scaffolding mediator of receptor tyrosine kinase signaling, is required for NRG1-induced peripheral nerve myelination. Here, we determined the role of Gab1 in the development of the NMJ using muscle-specific conditional Gab1 knockout mice. The mutant mice showed delayed postnatal maturation of the NMJ. Furthermore, the selective loss of the gab1 gene in terminal Schwann cells produced delayed synaptic elimination with abnormal morphology of the motor endplate, suggesting that Gab1 in both muscles and terminal Schwann cells is required for proper NMJ development. Gab1 in terminal Schwann cells appeared to regulate the number and process elongation of terminal Schwann cells during synaptic elimination. However, Gab2 knockout mice did not show any defects in the development of the NMJ. Considering the role of Gab1 in postnatal peripheral nerve myelination, our findings suggest that Gab1 is a pleiotropic and important component of NRG1 signals during postnatal development of the peripheral neuromuscular system.

Gab1 Mediates Hepatocyte Growth Factor-Stimulated Mitogenicity and Morphogenesis in Multipotent Myeloid Cells

PubMed Central

Felici, Angelina; Giubellino, Alessio; Bottaro, Donald P.

2012-01-01

Hepatocyte growth factor (HGF)-stimulated mitogenesis, motogenesis and morphogenesis in various cell types begins with activation of the Met receptor tyrosine kinase and the recruitment of intracellular adaptors and kinase substrates. The adapter protein Gab1 is a critical effector and substrate of activated Met, mediating morphogenesis, among other activities, in epithelial cells. To define its role downstream of Met in hematopoietic cells, Gab1 was expressed in the HGF-responsive, Gab1-negative murine myeloid cell line 32D. Interestingly, the adhesion and motility of Gab1-expressing cells were significantly greater than parental cells, independent of growth factor treatment. Downstream of activated Met, Gab1 expression was specifically associated with rapid Shp-2 recruitment and activation, increased mitogenic potency, suppression of GATA-1 expression and concomitant upregulation of GATA-2 transcription. In addition to enhanced proliferation, continuous culture of Gab1-expressing 32D cells in HGF resulted in cell attachment, filopodia extension and phenotypic changes suggestive of monocytic differentiation. Our results suggest that in myeloid cells, Gab1 is likely to enhance HGF mitogenicity by coupling Met to Shp-2 and GATA-2 expression, thereby potentially contributing to normal myeloid differentiation as well as oncogenic transformation. PMID:20506405

The signaling adapter Gab1 regulates cell polarity by acting as a PAR protein scaffold

PubMed Central

Yang, Ziqiang; Xue, Bin; Umitsu, Masataka; Ikura, Mitsuhiko; Muthuswamy, Senthil K.; Neel, Benjamin G.

2012-01-01

Summary Cell polarity plays a key role in development and is disrupted in tumors, yet the molecules and mechanisms that regulate polarity remain poorly defined. We found that the scaffolding adaptor GAB1 interacts with two polarity proteins, PAR1 and PAR3. GAB1 binds PAR1 and enhances its kinase activity. GAB1 brings PAR1 and PAR3 into a transient complex, stimulating PAR3 phosphorylation by PAR1. GAB1 and PAR6 bind the PAR3 PDZ1 domain and thereby compete for PAR3 binding. Consequently, GAB1 depletion causes PAR3 hypo-phosphorylation and increases PAR3/PAR6 complex formation, resulting in accelerated and enhanced tight junction formation, increased trans-epithelial resistance and lateral domain shortening. Conversely, GAB1 over-expression, in a PAR1/PAR3-dependent manner, disrupts epithelial apical-basal polarity, promotes multi-lumen cyst formation, and enhances growth factor-induced epithelial cell scattering. Our results identify GAB1 as a novel negative regulator of epithelial cell polarity that functions as a scaffold for modulating PAR protein complexes on the lateral membrane. PMID:22883624

Gender atypical behavior in Chinese school-aged children: its prevalence and relation to sex, age, and only child status.

PubMed

Yu, Lu; Winter, Sam

2011-07-01

This study had three purposes: (a) to compare the prevalence of boys' and girls' gender-atypical behaviors (GABs) in a sample of Chinese school-aged children, (b) to examine the developmental pattern of GABs in Chinese boys and girls over the age range in question (6-12 years), and (c) to test the effects of being an only child on children's GAB expression. Parents of 486 boys and 417 girls completed a Child Play Behavior and Activity Questionnaire (CPBAQ) in regard to their own children, and a demographic information sheet. The frequency distribution for each gender-related behavior was calculated. The associations between sex, age, and only-child status, and CPBAQ scale scores were examined. Although most GABs (by their very nature) were exhibited infrequently in Chinese children, it was found that girls displayed GABs more frequently than boys did. The prevalence of GABs rose for girls as they grew older, but fell slightly for boys. The expressions of GABs in only children did not differ from that in children with siblings. Possible effects of Chinese culture (including the current only-child policy) on children's GABs are discussed.

Essential roles of Gab1 tyrosine phosphorylation in growth factor-mediated signaling and angiogenesis.

PubMed

Wang, Weiye; Xu, Suowen; Yin, Meimei; Jin, Zheng Gen

2015-02-15

Growth factors and their downstream receptor tyrosine kinases (RTKs) mediate a number of biological processes controlling cell function. Adaptor (docking) proteins, which consist exclusively of domains and motifs that mediate molecular interactions, link receptor activation to downstream effectors. Recent studies have revealed that Grb2-associated-binders (Gab) family members (including Gab1, Gab2, and Gab3), when phosphorylated on tyrosine residues, provide binding sites for multiple effector proteins, such as Src homology-2 (SH2)-containing protein tyrosine phosphatase 2 (SHP2) and phosphatidylinositol 3-kinase (PI3K) regulatory subunit p85, thereby playing important roles in transducing RTKs-mediated signals into pathways with diversified biological functions. Here, we provide an up-to-date overview on the domain structure and biological functions of Gab1, the most intensively studied Gab family protein, in growth factor signaling and biological functions, with a special focus on angiogenesis. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Identification of phototransformation products of the antiepileptic drug gabapentin: Biodegradability and initial assessment of toxicity.

PubMed

Herrmann, Manuel; Menz, Jakob; Olsson, Oliver; Kümmerer, Klaus

2015-11-15

The anticonvulsant drug Gabapentin (GAB) is used for the treatment of various diseases (e.g. epilepsy, bipolar disorder, neuropathic pain) and is being consumed in high amounts. As GAB is not metabolized and shows a weak elimination in sewage treatment plants (STPs), it has been detected in surface water and even in raw potable water. Moreover, the confirmed teratogenic effects of GAB indicate the need for further investigations regarding options for the elimination of GAB in the water cycle. Little is known about the behavior of GAB during treatment with UV light, which is normally used for the disinfection of potable water and discussed for advanced wastewater treatment. In this study, GAB was exposed to polychromatic UV irradiation at different initial concentrations in aqueous solution. Afterwards the structures of the resulting phototransformation products (PTPs) were identified and elucidated by means of high-resolution mass spectrometry. GAB and photolytic mixtures were submitted to the Closed Bottle Test (CBT; OECD 301 D) to assess biodegradability. Furthermore, the toxicity of GAB and its photolytic mixtures was initially addressed on screening level using a modified luminescent bacteria test (LBT) and the umu-test (ISO/FDIS 13829). Environmentally realistic concentrations of GAB were disclosed by predicting STP influent concentrations (24.3 and 23.2 μg L(-1)). GAB with initial concentration of 100 mg L(-1) was eliminated by 80% after 128 min of direct UV irradiation, but just 9% of non-purgeable organic carbon (NPOC) was removed indicating the formation of dead-end transformation products (TPs). Structures of different PTPs were elucidated and several identical PTPs could also be identified at lower initial treatment concentrations (20 mg L(-1), 5 mg L(-1), 1 mg L(-1) and 0.1 mg L(-1)). GAB was classified as not readily biodegradable. Moreover, photo treatment did not result in better biodegradable PTPs. With increasing UV treatment duration, photolytic mixtures of GAB showed an increased inhibition of both, the bacterial luminescence emission as well as the growth in the modified LBT. In the umu-test no significant induction of the umuC gene as an indicator of genotoxicity was observed. Our results show that UV irradiation of GAB containing water would lead to the formation of recalcitrant PTPs. Considering that GAB was found in raw drinking water, the formation of toxic PTPs during drinking water treatment with UV light might be possible. Therefore, further studies should be conducted regarding the fate and effects on human health and the environment of GAB and the PTPs identified within this study. Copyright © 2015 Elsevier Ltd. All rights reserved.

Identification of tyrosine phosphorylation sites in human Gab-1 protein by EGF receptor kinase in vitro.

PubMed

Lehr, S; Kotzka, J; Herkner, A; Klein, E; Siethoff, C; Knebel, B; Noelle, V; Brüning, J C; Klein, H W; Meyer, H E; Krone, W; Müller-Wieland, D

1999-01-05

Grb2-associated binder-1 (Gab-1) has been identified recently in a cDNA library of glioblastoma tumors and appears to play a central role in cellular growth response, transformation, and apoptosis. Structural and functional features indicate that Gab-1 is a multisubstrate docking protein downstream in the signaling pathways of different receptor tyrosine kinases, including the epidermal growth factor receptor (EGFR). Therefore, the aim of the study was to characterize the phosphorylation of recombinant human Gab-1 (hGab-1) protein by EGFR in vitro. Using the pGEX system to express the entire protein and different domains of hGab-1 as glutathione S-transferase proteins, kinetic data for phosphorylation of these proteins by wheat germ agglutinine-purified EGFR and the recombinant EGFR (rEGFR) receptor kinase domain were determined. Our data revealed similar affinities of hGab-1-C for both receptor preparations (KM = 2.7 microM for rEGFR vs 3.2 microM for WGA EGFR) as well as for the different recombinant hGab-1 domains. To identify the specific EGFR phosphorylation sites, hGab-1-C was sequenced by Edman degradation and mass spectrometry. The entire protein was phosphorylated by rEGFR at eight tyrosine residues (Y285, Y373, Y406, Y447, Y472, Y619, Y657, and Y689). Fifty percent of the identified radioactivity was incorporated in tyrosine Y657 as the predominant peak in HPLC analysis, a site exhibiting features of a potential Syp (PTP1D) binding site. Accordingly, GST-pull down assays with A431 and HepG2 cell lysates showed that phosphorylated intact hGab-1 was able to bind Syp. This binding appears to be specific, because it was abolished by changing the Y657 of hGab-1 to F657. These results demonstrate that hGab-1 is a high-affinity substrate for the EGFR and the major tyrosine phosphorylation site Y657 in the C terminus is a specific binding site for the tyrosine phosphatase Syp.

Using excess 4He to quantify variability in aquitard leakage

NASA Astrophysics Data System (ADS)

Gardner, W. Payton; Harrington, Glenn A.; Smerdon, Brian D.

2012-10-01

SummaryFluid flux through aquitards controls the rate of recharge, discharge, cross-formational fluid flow and contaminant transport in subsurface systems. In this paper, concentrations of 4He are used to investigate the spatial distribution of vertical fluid flux through the regionally extensive Great Artesian Basin aquitard system in northern South Australia. Two vertical profiles of 4He concentration in aquitard pore water, augmented with regional sampling of aquifers above and below the aquitard were used to estimate fluid flux at multiple locations over a large spatial area. 4He concentrations in the shallow aquifer above the Great Artesian Basin range from atmospheric equilibrium to 1000 times enriched over atmosphere. Fluid flux through the aquitard was estimated by fitting observed helium concentrations at each sampling site with a 1-D model of helium transport through the aquitard. Estimated fluid fluxes through the aquitard vary over three orders of magnitude across the study area. In areas of competent aquitard, fluid fluxes are less than 0.003 mm/yr, and mass transport of helium is dominated by molecular diffusion. Preferential discharge zones are clearly identifiable with fluid fluxes up to 3 mm/yr. Our results show that fluid flux through a regionally extensive aquitard can be highly variable at large spatial scales, and that 4He concentrations in aquifers bounding the aquitard system provide a convenient and sensitive method for investigating aquitard flux at the regional scale.

Gab1 regulates proliferation and migration through the PI3K/Akt signaling pathway in intrahepatic cholangiocarcinoma.

PubMed

Sang, Haiquan; Li, Tingting; Li, Hangyu; Liu, Jingang

2015-11-01

Intrahepatic cholangiocarcinoma is the second most common primary malignant tumor of the liver, and it originates from the intrahepatic biliary duct epithelium. Prognosis is poor due to lack of effective comprehensive treatments. In this study, we assessed the expression of Gab1, VEGFR-2, and MMP-9 in intrahepatic cholangiocarcinoma solid tumors by immunohistochemistry and determined whether their expression was associated with clinical and pathological features. We found that expression of Gab1, VEGFR-2, and MMP-9 was highly and positively correlated with each other and with lymph node metastasis and TNM stage in intrahepatic cholangiocarcinoma tissues. Interference of Gab1 and VEGFR-2 expression via siRNA in the intrahepatic cholangiocarcinoma cell line RBE resulted in decreased PI3K/Akt pathway activity. Inhibition of Gab1 and VEGFR-2 expression also caused decreased cell proliferation, cell cycle arrested in G1 phase, increased apoptosis, and decreased invasion in RBE cells. These results suggest that Gab1, VEGFR-2, and MMP-9 contribute significantly to the highly malignant behavior of intrahepatic cholangiocarcinoma. The regulation of growth, apoptosis, and invasion by Gab1 through the VEGFR-2/Gab1/PI3K/Akt signaling pathway may represent potential targets for improving the treatment of intrahepatic cholangiocarcinoma.

GAB2 Alleles Modify Alzheimer’s Risk in APOE ε4 Carriers

PubMed Central

Reiman, Eric M.; Webster, Jennifer A.; Myers, Amanda J.; Hardy, John; Dunckley, Travis; Zismann, Victoria L.; Joshipura, Keta D.; Pearson, John V.; Hu-Lince, Diane; Huentelman, Matthew J.; Craig, David W.; Coon, Keith D.; Liang, Winnie S.; Herbert, RiLee H.; Beach, Thomas; Rohrer, Kristen C.; Zhao, Alice S.; Leung, Doris; Bryden, Leslie; Marlowe, Lauren; Kaleem, Mona; Mastroeni, Diego; Grover, Andrew; Heward, Christopher B.; Ravid, Rivka; Rogers, Joseph; Hutton, Michael L.; Melquist, Stacey; Petersen, Ron C.; Alexander, Gene E.; Caselli, Richard J.; Kukull, Walter; Papassotiropoulos, Andreas; Stephan, Dietrich A.

2008-01-01

SUMMARY The apolipoprotein E (APOE) ε4 allele is the best established genetic risk factor for late-onset Alzheimer’s disease (LOAD). We conducted genome-wide surveys of 502,627 single-nucleotide polymorphisms (SNPs) to characterize and confirm other LOAD susceptibility genes. In ε4 carriers from neuropathologically verified discovery, neuropathologically verified replication, and clinically characterized replication cohorts of 1411 cases and controls, LOAD was associated with six SNPs from the GRB-associated binding protein 2 (GAB2) gene and a common haplotype encompassing the entire GAB2 gene. SNP rs2373115 (p = 9 × 10−11) was associated with an odds ratio of 4.06 (confidence interval 2.81–14.69), which interacts with APOE ε4 to further modify risk. GAB2 was overexpressed in pathologically vulnerable neurons; the Gab2 protein was detected in neurons, tangle-bearing neurons, and dystrophic neuritis; and interference with GAB2 gene expression increased tau phosphorylation. Our findings suggest that GAB2 modifies LOAD risk in APOE ε4 carriers and influences Alzheimer’s neuropathology. PMID:17553421

Evidences of "Lago-Mare" episode around the Messinian-Pliocene boundary in eastern Tunisia (central Mediterranean)

NASA Astrophysics Data System (ADS)

Frigui, Mouna; Ben Youssef, Mohamed; Ouaja, Mohamed

2016-11-01

Eight stratigraphic sections, located in northeastern part of the Sahel area of Tunisia recorded evidences of "Lago-Mare" episode and events related to the Messinian-Late Pliocene interval. A comparison with previous studies carried on sections from neighboring areas and boreholes data drilled within the Gulf of Hammamet and the Gulf of Gabès, is conducted and gives useful information to characterize the Late Messinian to Late Pliocene events. The most notable feature distinguished in the studied area consists on the lack of gypsum, commonly recorded in relation with the crucial event of the Messinian Salinity Crisis. However, only lagoonal deposits, bearing messinian brackish fauna, are encountered. These sediments are usually attributed to the "Segui" formation or the so called "Mio-Pliocene continental". Thin sections samples and field observations have recognized sands, marls, clays, lacustrine limestone, some gypsum lenses, mud-cracks, lignite and Messinian brackish fauna. Similar deposits were previously described in the Kechabta basin from the Northern Tunisia and in some wells from the Gulf of Gabès and the Gulf of Hammamet. We suggest that all these facies belong to the coeval of the "Lago-Mare" facies within Eastern and Western Mediterranean basins (e.g. Sicily, Mallorca, Libya and Cyprus). Finally, four major erosional surfaces have been recorded within the Late Messinian-Late Pliocene deposits, aged post-Tortonian, intra-Messinian, Late Messinian and intra-Pliocene times. They seem to be the result of local tectonic uplifts and eustatic fluctuations.

Acquired Substrate Preference for GAB1 Protein Bestows Transforming Activity to ERBB2 Kinase Lung Cancer Mutants

PubMed Central

Fan, Ying-Xin; Wong, Lily; Marino, Michael P.; Ou, Wu; Shen, Yi; Wu, Wen Jin; Wong, Kwok-Kin; Reiser, Jakob; Johnson, Gibbes R.

2013-01-01

Activating mutations in the αC-β4 loop of the ERBB2 kinase domain, such as ERBB2YVMA and ERBB2G776VC, have been identified in human lung cancers and found to drive tumor formation. Here we observe that the docking protein GAB1 is hyper-phosphorylated in carcinomas from transgenic mice and in cell lines expressing these ERBB2 cancer mutants. Using dominant negative GAB1 mutants lacking canonical tyrosine residues for SHP2 and PI3K interactions or lentiviral shRNA that targets GAB1, we demonstrate that GAB1 phosphorylation is required for ERBB2 mutant-induced cell signaling, cell transformation, and tumorigenesis. An enzyme kinetic analysis comparing ERBB2YVMA to wild type using physiologically relevant peptide substrates reveals that ERBB2YVMA kinase adopts a striking preference for GAB1 phosphorylation sites as evidenced by ∼150-fold increases in the specificity constants (kcat/Km) for several GAB1 peptides, and this change in substrate selectivity was predominantly attributed to the peptide binding affinities as reflected by the apparent Km values. Furthermore, we demonstrate that ERBB2YVMA phosphorylates GAB1 protein ∼70-fold faster than wild type ERBB2 in vitro. Notably, the mutation does not significantly alter the Km for ATP or sensitivity to lapatinib, suggesting that, unlike EGFR lung cancer mutants, the ATP binding cleft of the kinase is not significantly changed. Taken together, our results indicate that the acquired substrate preference for GAB1 is critical for the ERBB2 mutant-induced oncogenesis. PMID:23612964

Nitrate Sources, Supply, and Phytoplankton Growth in the Great Australian Bight: An Eulerian-Lagrangian Modeling Approach

NASA Astrophysics Data System (ADS)

Cetina-Heredia, Paulina; van Sebille, Erik; Matear, Richard J.; Roughan, Moninya

2018-02-01

The Great Australian Bight (GAB), a coastal sea bordered by the Pacific, Southern, and Indian Oceans, sustains one of the largest fisheries in Australia but the geographical origin of nutrients that maintain its productivity is not fully known. We use 12 years of modeled data from a coupled hydrodynamic and biogeochemical model and an Eulerian-Lagrangian approach to quantify nitrate supply to the GAB and the region between the GAB and the Subantarctic Australian Front (GAB-SAFn), identify phytoplankton growth within the GAB, and ascertain the source of nitrate that fuels it. We find that nitrate concentrations have a decorrelation timescale of ˜60 days; since most of the water from surrounding oceans takes longer than 60 days to reach the GAB, 23% and 75% of nitrate used by phytoplankton to grow are sourced within the GAB and from the GAB-SAFn, respectively. Thus, most of the nitrate is recycled locally. Although nitrate concentrations and fluxes into the GAB are greater below 100 m than above, 79% of the nitrate fueling phytoplankton growth is sourced from above 100 m. Our findings suggest that topographical uplift and stratification erosion are key mechanisms delivering nutrients from below the nutricline into the euphotic zone and triggering large phytoplankton growth. We find annual and semiannual periodicities in phytoplankton growth, peaking in the austral spring and autumn when the mixed layer deepens leading to a subsurface maximum of phytoplankton growth. This study highlights the importance of examining phytoplankton growth at depth and the utility of Lagrangian approaches.

GABA (γ-Aminobutyric Acid) Uptake Via the GABA Permease GabP Represses Virulence Gene Expression in Pseudomonas syringae pv. tomato DC3000.

PubMed

McCraw, S L; Park, D H; Jones, R; Bentley, M A; Rico, A; Ratcliffe, R G; Kruger, N J; Collmer, A; Preston, G M

2016-12-01

The nonprotein amino acid γ-aminobutyric acid (GABA) is the most abundant amino acid in the tomato (Solanum lycopersicum) leaf apoplast and is synthesized by Arabidopsis thaliana in response to infection by the bacterial pathogen Pseudomonas syringae pv. tomato DC3000 (hereafter called DC3000). High levels of exogenous GABA have previously been shown to repress the expression of the type III secretion system (T3SS) in DC3000, resulting in reduced elicitation of the hypersensitive response (HR) in the nonhost plant tobacco (Nicotiana tabacum). This study demonstrates that the GABA permease GabP provides the primary mechanism for GABA uptake by DC3000 and that the gabP deletion mutant ΔgabP is insensitive to GABA-mediated repression of T3SS expression. ΔgabP displayed an enhanced ability to elicit the HR in young tobacco leaves and in tobacco plants engineered to produce increased levels of GABA, which supports the hypothesis that GABA uptake via GabP acts to regulate T3SS expression in planta. The observation that P. syringae can be rendered insensitive to GABA through loss of gabP but that gabP is retained by this bacterium suggests that GabP is important for DC3000 in a natural setting, either for nutrition or as a mechanism for regulating gene expression. [Formula: see text] Copyright © 2016 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

MicroRNA-150 suppresses cell proliferation and metastasis in hepatocellular carcinoma by inhibiting the GAB1-ERK axis

PubMed Central

Shang, Runze; Zhou, Liang; Wang, Xing; Duan, Juanli; Ruan, Bai; Gao, Yuan; Dai, Bin; Qu, Shibin; Liu, Wei; Ding, Rui; Wang, Lin; Wang, Desheng; Dou, Kefeng

2016-01-01

MicroRNA-150 (miR-150) is frequently dysregulated in cancer and is involved in carcinogenesis and cancer progression. In this study, we found that miR-150 was significantly downregulated in hepatocellular carcinoma (HCC) tissues compared to adjacent noncancerous tissues. Low levels of miR-150 were significantly associated with worse clinicopathological characteristics and a poor prognosis for patients with HCC. miR-150 overexpression inhibited cell proliferation, migration and invasion in vitro and tumor growth and metastasis in vivo. Further experiments indicated that Grb2-associated binding protein 1 (GAB1) was a direct target of miR-150 in HCC cells. In addition, GAB1 expression was increased in HCC tissues and inversely correlated with miR-150 levels. Knockdown of GAB1 mimicked the tumor-suppressive effects of miR-150 overexpression on HCC cells, whereas restoration of GAB1 expression partially abolished the inhibitory effects. Moreover, miR-150 overexpression decreased GAB1 expression, subsequently downregulated phospho-ERK1/2 and suppressed epithelial-mesenchymal-transition (EMT). These effects caused by miR-150 overexpression were alleviated by exogenous GAB1 expression. Taken together, this study demonstrates that miR-150 may be useful as a prognostic marker and that the identified miR-150-GAB1-ERK axis is a potential therapeutic target for HCC. PMID:26871477

Artesian Well Abandonment at Launch Complex 39A

NASA Technical Reports Server (NTRS)

Morgan, Lindsay; Johansen, Deda

2015-01-01

The artesian well tasked for abandonment was located on the LOX side (northwest area) of the launch complex. The exact date of well installation is unknown. The well was no longer in use at the time of the abandonment request, but was previously utilized under St. Johns River Water Management District (SJRWMD) consumptive use permit (No. 50054) for the Floridian Aquifer. The exact construction details of the LOX artesian well were also unknown; however, a similar-type artesian well was previously located on the LH2 side of the site, which was abandoned in 2012. Based on discussions with the NASA RPM and review of the LH2 artesian well abandonment completion report, the LH2 artesian well was reported to be an 8-inch diameter, 330-foot deep well. The NASA RPM communicated that the LOX artesian well was likely to be an 8-inch diameter, 380-foot deep well. This information was used for scoping, and was subsequently confirmed to be substantially accurate. No additional information could be found for the LOX artesian well using the NASA Remediation Information System (RIS).

Hydrogeologic framework and groundwater conditions of the Ararat Basin in Armenia

USGS Publications Warehouse

Valder, Joshua F.; Carter, Janet M.; Medler, Colton J.; Thompson, Ryan F.; Anderson, Mark T.

2018-01-17

Armenia is a landlocked country located in the mountainous Caucasus region between Asia and Europe. It shares borders with the countries of Georgia on the north, Azerbaijan on the east, Iran on the south, and Turkey and Azerbaijan on the west. The Ararat Basin is a transboundary basin in Armenia and Turkey. The Ararat Basin (or Ararat Valley) is an intermountain depression that contains the Aras River and its tributaries, which also form the border between Armenia and Turkey and divide the basin into northern and southern regions. The Ararat Basin also contains Armenia’s largest agricultural and fish farming zone that is supplied by high-quality water from wells completed in the artesian aquifers that underlie the basin. Groundwater constitutes about 40 percent of all water use, and groundwater provides 96 percent of the water used for drinking purposes in Armenia. Since 2000, groundwater withdrawals and consumption in the Ararat Basin of Armenia have increased because of the growth of aquaculture and other uses. Increased groundwater withdrawals caused decreased springflow, reduced well discharges, falling water levels, and a reduction of the number of flowing artesian wells in the southern part of Ararat Basin in Armenia.In 2016, the U.S. Geological Survey and the U.S. Agency for International Development (USAID) began a cooperative study in Armenia to share science and field techniques to increase the country’s capabilities for groundwater study and modeling. The purpose of this report is to describe the hydrogeologic framework and groundwater conditions of the Ararat Basin in Armenia based on data collected in 2016 and previous hydrogeologic studies. The study area includes the Ararat Basin in Armenia. This report was completed through a partnership with USAID/Armenia in the implementation of its Science, Technology, Innovation, and Partnerships effort through the Advanced Science and Partnerships for Integrated Resource Development program and associated partners, including the Government of Armenia, Armenia’s Hydrogeological Monitoring Center, and the USAID Global Development Lab and its GeoCenter.The hydrogeologic framework of the Ararat Basin includes several basin-fill stratigraphic units consisting of interbedded dense clays, gravels, sands, volcanic basalts, and andesite deposits. Previously published cross sections and well lithologic logs were used to map nine general hydrogeologic units. Hydrogeologic units were mapped based on lithology and water-bearing potential. Water-level data measured in the water-bearing hydrogeologic units 2, 4, 6, and 8 in 2016 were used to create potentiometric surface maps. In hydrogeologic unit 2, the estimated direction of groundwater flow is from the west to north in the western part of the basin (away from the Aras River) and from north to south (toward the Aras River) in the eastern part of the basin. In hydrogeologic unit 4, the direction of groundwater flow is generally from west to east and north to south (toward the Aras River) except in the western part of the basin where groundwater flow is toward the north or northwest. Hydrogeologic unit 6 has the same general pattern of groundwater flow as unit 4. Hydrogeologic unit 8 is the deepest of the water-bearing units and is confined in the basin. Groundwater flow generally is from the south to north (away from the Aras River) in the western part of the basin and from west to east and north to south (toward the Aras River) elsewhere in the basin.In addition to water levels, personnel from Armenia’s Hydrogeological Monitoring Center also measured specific conductance at 540 wells and temperature at 2,470 wells in the Ararat Basin using U.S. Geological Survey protocols in 2016. The minimum specific conductance was 377 microsiemens per centimeter (μS/cm), the maximum value was 4,000 μS/cm, and the mean was 998 μS/cm. The maximum water temperature was 24.2 degrees Celsius. An analysis between water temperature and well depth indicated no relation; however, spatially, most wells with cooler water temperatures were within the 2016 pressure boundary or in the western part of the basin. Wells with generally warmer water temperatures were in the eastern part of the basin.Samples were collected from four groundwater sites and one surface-water site by the U.S. Geological Survey in 2016. The stable-isotope values were similar for all five sites, indicating similar recharge sources for the sampled wells. The Hrazdan River sample was consistent with the groundwater samples, indicating the river could serve as a source of recharge to the Ararat artesian aquifer.

Engineering of Specific Tissue Inhibitors to Block ADAM Type Metalloprotease-Mediated Mammary Neoplasia

DTIC Science & Technology

2001-07-01

stimulated by KUZ, but not KAMP. SHC or Gabi in COS7 cells was immunoprecipitated with the polyclonal 8 antibody to SHC or Gab1 . Activation of SHC or Gab1 ...was detected in immunoblots as phosphorylation of SHC or Gab1 with anti-phosphotyrosine antibody 4G10. (C) KUZ elevates GPCR-induced Ras activation...decreased the bombesin-dependent phosphorylation of all three isoforms of the adapter protein SHC (Fig. 2 A) and another adapter Gab1 (Fig. 2 B). KUZ

The Multisubstrate Adapter Gab1 Regulates Hepatocyte Growth Factor (Scatter Factor)–c-Met Signaling for Cell Survival and DNA Repair

PubMed Central

Fan, Saijun; Ma, Yong Xian; Gao, Min; Yuan, Ren-Qi; Meng, Qinghui; Goldberg, Itzhak D.; Rosen, Eliot M.

2001-01-01

Hepatocyte growth factor (scatter factor) (HGF/SF) is a pleiotrophic mediator of epithelial cell motility, morphogenesis, angiogenesis, and tumorigenesis. HGF/SF protects cells against DNA damage by a pathway from its receptor c-Met to phosphatidylinositol 3-kinase (PI3K) to c-Akt, resulting in enhanced DNA repair and decreased apoptosis. We now show that protection against the DNA-damaging agent adriamycin (ADR; topoisomerase IIα inhibitor) requires the Grb2-binding site of c-Met, and overexpression of the Grb2-associated binder Gab1 (a multisubstrate adapter required for epithelial morphogenesis) inhibits the ability of HGF/SF to protect MDCK epithelial cells against ADR. In contrast to Gab1 and its homolog Gab2, overexpression of c-Cb1, another multisubstrate adapter that associates with c-Met, did not affect protection. Gab1 blocked the ability of HGF/SF to cause the sustained activation of c-Akt and c-Akt signaling (FKHR phosphorylation). The Gab1 inhibition of sustained c-Akt activation and of cell protection did not require the Gab1 pleckstrin homology or SHP2 phosphatase-binding domain but did require the PI3K-binding domain. HGF/SF protection of parental MDCK cells was blocked by wortmannin, expression of PTEN, and dominant negative mutants of p85 (regulatory subunit of PI3K), Akt, and Pak1; the protection of cells overexpressing Gab1 was restored by wild-type or activated mutants of p85, Akt, and Pak1. These findings suggest that the adapter Gab1 may redirect c-Met signaling through PI3K away from a c-Akt/Pak1 cell survival pathway. PMID:11438654

GAB2 amplifications refine molecular classification of melanoma.

PubMed

Chernoff, Karen A; Bordone, Lindsey; Horst, Basil; Simon, Katherine; Twadell, William; Lee, Keagan; Cohen, Jason A; Wang, Shuang; Silvers, David N; Brunner, Georg; Celebi, Julide Tok

2009-07-01

Gain-of-function mutations in BRAF, NRAS, or KIT are associated with distinct melanoma subtypes with KIT mutations and/or copy number changes frequently observed among melanomas arising from sun-protected sites, such as acral skin (palms, soles, and nail bed) and mucous membranes. GAB2 has recently been implicated in melanoma pathogenesis, and increased copy numbers are found in a subset of melanomas. We sought to determine the association of increased copy numbers of GAB2 among melanoma subtypes in the context of genetic alterations in BRAF, NRAS, and KIT. A total of 85 melanomas arising from sun-protected (n = 23) and sun-exposed sites (n = 62) were analyzed for copy number changes using array-based comparative genomic hybridization and for gain-of-function mutations in BRAF, NRAS, and KIT. GAB2 amplifications were found in 9% of the cases and were associated with melanomas arising from acral and mucosal sites (P = 0.005). Increased copy numbers of the KIT locus were observed in 6% of the cases. The overall mutation frequencies for BRAF and NRAS were 43.5% and 14%, respectively, and were mutually exclusive. Among the acral and mucosal melanomas studied, the genetic alteration frequency was 26% for GAB2, 13% for KIT, 30% for BRAF, and 4% for NRAS. Importantly, the majority of GAB2 amplifications occurred independent from genetic events in BRAF, NRAS, and KIT. GAB2 amplification is critical for melanomas arising from sun-protected sites. Genetic alterations in GAB2 will help refine the molecular classification of melanomas.

Down-regulation of Gab1 inhibits cell proliferation and migration in hilar cholangiocarcinoma.

PubMed

Sang, Haiquan; Li, Tingting; Li, Hangyu; Liu, Jingang

2013-01-01

Hilar cholangiocarcinoma is a highly aggressive malignancy originating from the hilar biliary duct epithelium. Due to few effective comprehensive treatments, the prognosis of hilar cholangiocarcinoma is poor. In this study, immunohistochemistry was first used to detect and analyze the expression of Gab1, VEGFR-2, and MMP-9 in hilar cholangiocarcinoma solid tumors and the relationships to the clinical pathological features. Furthermore, Gab1 and VEGFR-2 siRNA were used to interfere the hilar cholangiocarcinoma cell line ICBD-1 and then detect the PI3K/Akt signaling pathway, MMP-9 levels and malignant biological behaviors of tumor cells. The data showed that 1. Gab1, VEGFR-2, and MMP-9 were highly expressed and positively correlated with each other in hilar cholangiocarcinoma tissues, which were related to lymph node metastasis and differentiation. 2. After Gab1 or VEGFR-2 siRNA interference, PI3K/Akt pathway activity and MMP-9 levels were decreased in ICBD-1 cells. At the same time, cell proliferation decreased, cell cycle arrested in G1 phase, apoptosis increased and invasion decreased. These results suggest that the expression of Gab1, VEGFR-2, and MMP-9 are significantly related to the malignant biological behavior of hilar cholangiocarcinoma. Gab1 regulates growth, apoptosis and invasion through the VEGFR-2/Gab1/PI3K/Akt signaling pathway in hilar cholangiocarcinoma cells and influences the invasion of tumor cells via MMP-9.

Down-Regulation of Gab1 Inhibits Cell Proliferation and Migration in Hilar Cholangiocarcinoma

PubMed Central

Sang, Haiquan; Li, Tingting; Li, Hangyu; Liu, Jingang

2013-01-01

Hilar cholangiocarcinoma is a highly aggressive malignancy originating from the hilar biliary duct epithelium. Due to few effective comprehensive treatments, the prognosis of hilar cholangiocarcinoma is poor. In this study, immunohistochemistry was first used to detect and analyze the expression of Gab1, VEGFR-2, and MMP-9 in hilar cholangiocarcinoma solid tumors and the relationships to the clinical pathological features. Furthermore, Gab1 and VEGFR-2 siRNA were used to interfere the hilar cholangiocarcinoma cell line ICBD-1 and then detect the PI3K/Akt signaling pathway, MMP-9 levels and malignant biological behaviors of tumor cells. The data showed that 1. Gab1, VEGFR-2, and MMP-9 were highly expressed and positively correlated with each other in hilar cholangiocarcinoma tissues, which were related to lymph node metastasis and differentiation. 2. After Gab1 or VEGFR-2 siRNA interference, PI3K/Akt pathway activity and MMP-9 levels were decreased in ICBD-1 cells. At the same time, cell proliferation decreased, cell cycle arrested in G1 phase, apoptosis increased and invasion decreased. These results suggest that the expression of Gab1, VEGFR-2, and MMP-9 are significantly related to the malignant biological behavior of hilar cholangiocarcinoma. Gab1 regulates growth, apoptosis and invasion through the VEGFR-2/Gab1/PI3K/Akt signaling pathway in hilar cholangiocarcinoma cells and influences the invasion of tumor cells via MMP-9. PMID:24312291

Gabaculine does not inhibit cytokinin-stimulated biosynthesis of chlorophyll in Pinus nigra seedlings in the dark.

PubMed

Drazic; Bogdanovic

2000-05-15

Chlorophyll (Chl) accumulation was monitored during black pine (Pinus nigra L.) seed germination for 14 days in the light and in the dark in the presence of gabaculine (GAB) and cytokinin in order to elucidate the regulation of gymnosperm seedling greening in the dark, primarily at the level of aminolevulinic acid formation. In the light, GAB inhibited chlorophyll accumulation in a manner dependent on concentration and developmental stage, and in the dark it showed no effect. Cytokinin, 10(-5) M benzyl adenine (BA) partly overcame GAB-induced inhibition in the light, mainly during earlier developmental stages. In the seedlings grown in the dark, an equal quantity of Chl accumulated in the presence of cytokinin with and without GAB and it was approximately 20-40% higher than in the control seedlings or in the seedlings grown only in the presence of GAB. 5-Amino-levulinic acid (ALA) synthesis was equal in the light and in the dark in seedlings of the same age and seedlings treated with GAB grown in the dark. In the light, GAB inhibited ALA synthetic activity. The results indicate that ALA synthesis is not a rate-limiting step within Chl biosynthesis in pine seedlings grown in the dark.

Enhanced enteroviral infectivity via viral protease-mediated cleavage of Grb2-associated binder 1

PubMed Central

Deng, Haoyu; Fung, Gabriel; Shi, Junyan; Xu, Suowen; Wang, Chen; Yin, Meimei; Hou, Jun; Zhang, Jingchun; Jin, Zheng-Gen; Luo, Honglin

2015-01-01

Coxsackievirus B3 (CVB3), an important human causative pathogen for viral myocarditis, pancreatitis, and meningitis, has evolved different strategies to manipulate the host signaling machinery to ensure successful viral infection. We previously revealed a crucial role for the ERK1/2 signaling pathway in regulating viral infectivity. However, the detail mechanism remains largely unknown. Grb2-associated binder 1 (GAB1) is an important docking protein responsible for intracellular signaling assembly and transduction. In this study, we demonstrated that GAB1 was proteolytically cleaved after CVB3 infection at G175 and G436 by virus-encoded protease 2Apro, independent of caspase activation. Knockdown of GAB1 resulted in a significant reduction of viral protein expression and virus titers. Moreover, we showed that virus-induced cleavage of GAB1 is beneficial to viral growth as the N-terminal proteolytic product of GAB1 (GAB1-N1–174) further enhances ERK1/2 activation and promotes viral replication. Our results collectively suggest that CVB3 targets host GAB1 to generate a GAB1-N1–174 fragment that enhances viral infectivity, at least in part, via activation of the ERK pathway. The findings in this study suggest a novel mechanism that CVB3 employs to subvert the host signaling and facilitate consequent viral replication.—Deng, H., Fung, G., Shi, J., Xu, S., Wang, C., Yin, M., Hou, J., Zhang, J., Jin, Z.-G., Luo, H. Enhanced enteroviral infectivity via viral protease-mediated cleavage of Grb2-associated binder 1. PMID:26183772

Grb-2–associated binder 1 (Gab1) regulates postnatal ischemic and VEGF-induced angiogenesis through the protein kinase A–endothelial NOS pathway

PubMed Central

Xiong, Yan; Huo, Yingqing; Han, Jingyan; Yang, Xiao; Zhang, Rongli; Zhu, De-Sheng; Klein-Heßling, Stefan; Zhang, Xiaoyu; Han, Xiaofan; Li, Yanli; Shen, Bin; He, Yulong; Shibuya, Masabumi; Feng, Gen-Sheng; Luo, Jincai

2011-01-01

The intracellular signaling mechanisms underlying postnatal angiogenesis are incompletely understood. Herein we show that Grb-2–associated binder 1 (Gab1) plays a critical role in ischemic and VEGF-induced angiogenesis. Endothelium-specific Gab1 KO (EGKO) mice displayed impaired angiogenesis in the ischemic hindlimb despite normal induction of VEGF expression. Matrigel plugs with VEGF implanted in EGKO mice induced fewer capillaries than those in control mice. The vessels and endothelial cells (ECs) derived from EGKO mice were defective in vascular sprouting and tube formation induced by VEGF. Biochemical analyses revealed a substantial reduction of endothelial NOS (eNOS) activation in Gab1-deficient vessels and ECs following VEGF stimulation. Interestingly, the phosphorylation of Akt, an enzyme known to promote VEGF-induced eNOS activation, was increased in Gab1-deficient vessels and ECs whereas protein kinase A (PKA) activity was significantly decreased. Introduction of an active form of PKA rescued VEGF-induced eNOS activation and tube formation in EGKO ECs. Reexpression of WT or mutant Gab1 molecules in EGKO ECs revealed requirement of Gab1/Shp2 association for the activation of PKA and eNOS. Taken together, these results identify Gab1 as a critical upstream signaling component in VEGF-induced eNOS activation and tube formation, which is dependent on PKA. Of note, this pathway is conserved in primary human ECs for VEGF-induced eNOS activation and tube formation, suggesting considerable potential in treatment of human ischemic diseases. PMID:21282639

GC-GAP, a Rho family GTPase-activating protein that interacts with signaling adapters Gab1 and Gab2.

PubMed

Zhao, Chunmei; Ma, Hong; Bossy-Wetzel, Ella; Lipton, Stuart A; Zhang, Zhuohua; Feng, Gen-Sheng

2003-09-05

Gab1 and Gab2 are scaffolding proteins acting downstream of cell surface receptors and interact with a variety of cytoplasmic signaling proteins such as Grb2, Shp-2, phosphatidylinositol 3-kinase, Shc, and Crk. To identify new binding partners for GAB proteins and better understand their functions, we performed a yeast two-hybrid screening with hGab2-(120-587) as bait. This work led to identification of a novel GTPase-activating protein (GAP) for Rho family GTPases. The GAP domain shows high similarity to the recently cloned CdGAP and displays activity toward RhoA, Rac1, and Cdc42 in vitro. The protein was named GC-GAP for its ability to interact with GAB proteins and its activity toward Rac and Cdc42. GC-GAP is predominantly expressed in the brain with low levels detected in other tissues. Antibodies directed against GC-GAP recognized a protein of approximately 200 kDa. Expression of GC-GAP in 293T cells led to a reduction in active Rac1 and Cdc42 levels but not RhoA. Suppression of GC-GAP expression by siRNA inhibited proliferation of C6 astroglioma cells. In addition, GC-GAP contains several classic proline-rich motifs, and it interacts with the first SH3 domain of Crk and full-length Nck in vitro. We propose that Gab1 and Gab2 in cooperation with other adapter molecules might regulate the cellular localization of GC-GAP under specific stimuli, acting to regulate precisely Rac and Cdc42 activities. Given that GC-GAP is specifically expressed in the nervous system and that it is localized to the dendritic processes of cultured neurons, GC-GAP may play a role in dendritic morphogenesis and also possibly in neural/glial cell proliferation.

GAB2 as an Alzheimer disease susceptibility gene: follow-up of genomewide association results.

PubMed

Schjeide, Brit-Maren M; Hooli, Basavaraj; Parkinson, Michele; Hogan, Meghan F; DiVito, Jason; Mullin, Kristina; Blacker, Deborah; Tanzi, Rudolph E; Bertram, Lars

2009-02-01

Genomewide association (GWA) studies have recently implicated 4 novel Alzheimer disease (AD) susceptibility loci (GAB2, GOLM1, and 2 uncharacterized loci to date on chromosomes 9p and 15q). To our knowledge, these findings have not been independently replicated. To assess these GWA findings in 4 large data sets of families affected by AD. Follow-up of genetic association findings in previous studies. Academic research. More than 4000 DNA samples from almost 1300 families affected with AD. Genetic association analysis testing of 4 GWA signals (rs7101429 [GAB2], rs7019241 [GOLM1], rs10519262 [chromosome 15q], and rs9886784 [chromosome 9p]) using family-based methods. In the combined analyses, only rs7101429 in GAB2 yielded significant evidence of association with the same allele as in the original GWA study (P =.002). The results are in agreement with recent meta-analyses of this and other GAB2 polymorphisms suggesting approximately a 30% decrease in risk for AD among carriers of the minor alleles. None of the other 3 tested loci showed consistent evidence for association with AD across the investigated data sets. GAB2 contains genetic variants that may lead to a modest change in the risk for AD. Despite these promising results, more data from independent samples are needed to better evaluate the potential contribution of GAB2 to AD risk in the general population.

Geological report on water conditions at Platt National Park, Oklahoma

USGS Publications Warehouse

Gould, Charles Newton; Schoff, Stuart Leeson

1939-01-01

Platt National Park, located in southern Oklahoma, containing 842 acres, was established by Acts of Congress in 1902, 1904, and 1906. The reason for the setting aside of this area was the presence in the area of some 30 'mineral' springs, the water from which contains sulphur, bromide, salt, and other minerals, which are believed to possess medicinal qualities. For many generations the sulphur springs of the Chickasaw Nation had been known for their reputed healing qualities. It had long been the custom for families to come from considerable distances on horseback and in wagons and camp near the springs, in order to drink the water. In course of time a primitive town, known as Sulphur Springs, grew up near a group of springs known since as Pavilion Springs at the mouth of Sulphur Creek, now known as Travertine Creek. This town was still in existence at the time of my first visit to the locality in July, 1901. At this time, in company with Joseph A. Taff, of the United States Geological Survey, I spent a week riding over the country making a preliminary survey looking toward the setting aside of the area for a National Park. After the establishment of the National Park, the old town of Sulphur Springs was abandoned, and when the present boundaries of the park had been established the present town of Sulphur, now county seat of Murray County, grew up. In July 1906, on request of Superintendent Joseph F. Swords, I visited the park and made an examination of the various springs and submitted a report, dated August 15, 1906, to Secretary of the Interior E.A. Hitchcock. Copies of this report are on file in the Regional Office and at Platt National Park. In this report I set forth the approximate amount of flow of the various springs, the character of the water in each, and the conditions of the springs as of that date. I also made certain recommendations regarding proposed improvements of each spring. In this report I say: 'In the town of Sulphur, four wells have been drilled to a depth of between 450 and 500 feet in which artesian water has been secured. These wells are said to flow 200,000 gallons each per day.' I also say: 'From a study of the log of one of these wells, it appears that the artesian water is derived from the upper part of the Simpson sandstone. It is very probable that the water of the springs is derived from the same source.' This early was recognized the relation between the water from the mineral springs and that from the artesian wells. As the years have passed, other wells have been drilled in the town of Sulphur, chiefly to supply water for mineral baths and for swimming pools, so that to date more than 30 wells have been drilled. The exact number is not known. The custom has usually been to turn the wells loose and permit them to flow at full capacity, although some of the wells have been 'valved in' and the flow reduced. An estimate furnished me by the Secretary of the Chamber of Commerce in 1937, referred to later in this report, indicated that at that time 16 wells were flowing approximately 28,800,000 gallons of water per day, practically all of which ran to waste. For many years geologists in Oklahoma and elsewhere have watched this unrestricted waste of water from the artesian wells at Sulphur with growing concern. Remembering the history of other artesian basins throughout the world, these geologists believed that in all probability it was only a question of time until the water in the Sulphur artesian basin would begin to fail. On two different occasions the State Geologist of Oklahoma, bearing these conditions in mind, has prepared and had introduced into the State Legislature a bill which, if enacted into law, would have regulated the flow of water in artesian wells throughout the State. Both bills died in committee. Partly on account of the drought of the past three years, the matter has been brought to a head. In September 1938, Buffalo and Antelope Springs at the hea

Baseline study of Oxygen 18 and deuterium in the Roswell, New Mexico, groundwater basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hoy, R.N.; Gross, G.W.

The isotopic ratios of deuterium and oxygen 18 were measured in precipitation, surface, and ground water samples from the Roswell Artesian ground water basin in south-central New Mexico. The narrow range of D and 180 indicates mixing effects which are ascribed to one or more of the following factors: long ground water flow paths; large temperature fluctuations affecting which overwhelm the influence of elevation on precipitation; two sources of atmospheric moisture; interaquifer leakage; and recharge from intermittent streams with the flow-length expanding and contracting over large distances. It is concluded that a more precise definition of circulation patterns on themore » basis of stable isotope differences will require a much greater sampling frequency in both space and time.« less

Allostery Mediates Ligand Binding to Grb2 Adaptor in a Mutually Exclusive Manner

PubMed Central

McDonald, Caleb B.; El Hokayem, Jimmy; Zafar, Nawal; Balke, Jordan E.; Bhat, Vikas; Mikles, David C.; Deegan, Brian J.; Seldeen, Kenneth L.; Farooq, Amjad

2012-01-01

Allostery plays a key role in dictating the stoichiometry and thermodynamics of multi-protein complexes driving a plethora of cellular processes central to health and disease. Herein, using various biophysical tools, we demonstrate that although Sos1 nucleotide exchange factor and Gab1 docking protein recognize two non-overlapping sites within the Grb2 adaptor, allostery promotes the formation of two distinct pools of Grb2-Sos1 and Grb2-Gab1 binary signaling complexes in concert in lieu of a composite Sos1-Grb2-Gab1 ternary complex. Of particular interest is the observation that the binding of Sos1 to the nSH3 domain within Grb2 sterically blocks the binding of Gab1 to the cSH3 domain and vice versa in a mutually exclusive manner. Importantly, the formation of both the Grb2-Sos1 and Grb2-Gab1 binary complexes is governed by a stoichiometry of 2:1, whereby the respective SH3 domains within Grb2 homodimer bind to Sos1 and Gab1 via multivalent interactions. Collectively, our study sheds new light on the role of allostery in mediating cellular signaling machinery. PMID:23334917

La prospection geothermique de surface au Maroc: hydrodynamisme, anomalies thermiques et indices de surfaceGeothermal prospecting in Morocco: hydrodynamics, thermal anomalies and surface indices

NASA Astrophysics Data System (ADS)

Zarhloule, Y.; Lahrache, A.; Ben Abidate, L.; Khattach, D.; Bouri, S.; Boukdir, A.; Ben Dhia, H.

2001-05-01

Shallow geothermal prospecting ( < 700 m) has been performed in four zones in Morocco for which few deep data are available: northwestern basin, northeastern basin, Tadla Basin and Agadir Basin. These areas are different geologically and hydrogeologically. The temperature data from 250 wells at depths between 15 and 500 m have been analysed in order to estimate the natural geothermal gradient in these areas, to determine the principal thermal anomalies, to identify the main thermal indices and to characterise the recharge, discharge and potential mixing limits of the aquifers. The hydrostratigraphical study of each basin revealed several potential reservoir layers in which the Turonian carbonate aquifer (Tadal and Agadir Basins) and Liassic acquifer (Moroccan northwestern and northeastern basins) are the most important hot water reservoirs in Morocco. The recharge zones of each aquifer are characterised by high topography, high water potential, shallow cold water, low geothermal gradient and negative anomalies. The discharge zones are characterized by low topography, low piezometric level, high geothermal gradient, high temperature with hot springs and positive anomalies. The main thermal indices and the principal thermal anomalies that coincide with the artesian zones of the Turonian and Liassic aquifers have been identified.

GAB2 as an Alzheimer Disease Susceptibility Gene

PubMed Central

Schjeide, Brit-Maren M.; Hooli, Basavaraj; Parkinson, Michele; Hogan, Meghan F.; DiVito, Jason; Mullin, Kristina; Blacker, Deborah; Tanzi, Rudolph E.; Bertram, Lars

2009-01-01

Background Genomewide association (GWA) studies have recently implicated 4 novel Alzheimer disease (AD) susceptibility loci (GAB2, GOLM1, and 2 uncharacterized loci to date on chromosomes 9p and 15q). To our knowledge, these findings have not been independently replicated. Objective To assess these GWA findings in 4 large data sets of families affected by AD. Design Follow-up of genetic association findings in previous studies. Setting Academic research. Participants More than 4000 DNA samples from almost 1300 families affected with AD. Main Outcome Measures Genetic association analysis testing of 4 GWA signals (rs7101429 [GAB2], rs7019241 [GOLM1], rs10519262 [chromosome 15q], and rs9886784 [chromosome 9p]) using family-based methods. Results In the combined analyses, only rs7101429 in GAB2 yielded significant evidence of association with the same allele as in the original GWA study (P = .002). The results are in agreement with recent meta-analyses of this and other GAB2 polymorphisms suggesting approximately a 30% decrease in risk for AD among carriers of the minor alleles. None of the other 3 tested loci showed consistent evidence for association with AD across the investigated data sets. Conclusions GAB2 contains genetic variants that may lead to a modest change in the risk for AD. Despite these promising results, more data from independent samples are needed to better evaluate the potential contribution of GAB2 to AD risk in the general population. PMID:19204163

Gab1 Is Required for Cell Cycle Transition, Cell Proliferation, and Transformation Induced by an Oncogenic Met Receptor

PubMed Central

Mood, Kathleen; Saucier, Caroline; Bong, Yong-Sik; Lee, Hyun-Shik; Park, Morag

2006-01-01

We have shown previously that either Grb2- or Shc-mediated signaling from the oncogenic Met receptor Tpr-Met is sufficient to trigger cell cycle progression in Xenopus oocytes. However, direct binding of these adaptors to Tpr-Met is dispensable, implying that another Met binding partner mediates these responses. In this study, we show that overexpression of Grb2-associated binder 1 (Gab1) promotes cell cycle progression when Tpr-Met is expressed at suboptimal levels. This response requires that Gab1 possess an intact Met-binding motif, the pleckstrin homology domain, and the binding sites for phosphatidylinositol 3-kinase and tyrosine phosphatase SHP-2, but not the Grb2 and CrkII/phospholipase Cγ binding sites. Importantly, we establish that Gab1-mediated signals are critical for cell cycle transition promoted by the oncogenic Met and fibroblast growth factor receptors, but not by progesterone, the natural inducer of cell cycle transition in Xenopus oocytes. Moreover, Gab1 is essential for Tpr-Met–mediated morphological transformation and proliferation of fibroblasts. This study provides the first evidence that Gab1 is a key binding partner of the Met receptor for induction of cell cycle progression, proliferation, and oncogenic morphological transformation. This study identifies Gab1 and its associated signaling partners as potential therapeutic targets to impair proliferation or transformation of cancer cells in human malignancies harboring a deregulated Met receptor. PMID:16775003

Quantification of the Dedolomitization Rate for Correction of Groundwater 14C Ages in Aquifers of the Sacramento Mountains, New Mexico

NASA Astrophysics Data System (ADS)

Morse, J. T.; Phillips, F. M.; Land, L. A.

2009-12-01

Ion chemistry of groundwater from the western part of the Roswell Basin, New Mexico, are consistent with groundwater quality evolution driven by dedolomitization. Measured, uncorrected, 14C values in groundwater yield an apparent residence time of 4700 years for the western part of the Roswell Basin. We have employed a simple model incorporating the changes in bicarbonate, magnesium and 14C along the flow-path to quantify the in-situ rate of dedolomitization and thereby to correct the 14C values for inorganic carbon dilution. The model yielded a corrected residence time of 1300 years at the distal end of the flowpath and a regional hydraulic conductivity of 5×10-4cm/s. Prior studies have inferred that underflow from the Sacramento Mountains constitutes an important component of recharge to the Artesian Aquifer of the Roswell Basin but it has not been possible to quantify this contribution. The information from the corrected 14C dating will allow an improved assessment of the groundwater resources available in this overstressed basin.

Treatment with insulin uncovers the motogenic capacity of nitric oxide in aortic smooth muscle cells: dependence on Gab1 and Gab1-SHP2 association.

PubMed

Dixit, Madhulika; Zhuang, Daming; Ceacareanu, Bogdan; Hassid, Aviv

2003-11-14

Contrary to the antimotogenic effect of NO in dedifferentiated vascular smooth muscle cells (VSMCs), we have reported that NO stimulates the motility of differentiated cultured VSMC isolated from adult rats. This process involves upregulation of protein tyrosine phosphatase SHP2, followed by downregulation of RhoA activity. In the present study, we tested the hypothesis that insulin alters the motogenic phenotype of cultured rat aortic smooth muscle cells exposed to NO from inhibition to stimulation of cell motility. We demonstrate for the first time that NO stimulates the motility of VSMCs cultured for several days in the presence but not the absence of insulin. Moreover, we show that NO blocks PDGF-induced cell motility in insulin-naive but not in insulin-treated cells. We also demonstrate that the scaffold adapter protein Gab1, considered a physiological activator of protein tyrosine phosphatase SHP2, increases cell motility in the presence but not the absence of insulin. In cells cultured in the presence of insulin, overexpression of Gab1 mimics, whereas a dominant-negative allele of Gab1 (Gab1YF) blocks, the motility-stimulatory effect of NO. Cotransfection experiments with dominant-negative Gab1 and wild-type SHP2 or wild-type Gab1 and dominant-negative SHP2 indicate that the two proteins work together as a functional unit to induce motility. Because chronic insulin can increase the levels of phosphatidylinositol 3 (PI3) kinase in several models of hyperinsulinemia, we also tested the potential involvement of this enzyme in mechanisms leading to increased cell motility. We found that the motogenic effect of NO, Gab1, and SHP2 was blocked by the selective PI3 kinase inhibitor LY294002, suggesting a requirement of PI3 kinase in mediating motogenesis. These observations may be relevant to molecular mechanisms related to the pathogenesis of vascular disease in hyperinsulinemic diabetes. The full text of this article is available online at http://www.circresaha.org.

Artesian pressures and water quality in Paleozoic aquifers in the Ten Sleep area of the Bighorn Basin, north-central Wyoming

USGS Publications Warehouse

Cooley, M.E.

1985-01-01

Major Paleozoic artesian aquifers in the southeastern Bighorn Basin of Wyoming area, in descending order, the Tensleep Sandstone; the Madison Limestone and Bighorn Dolomite, which together form the Madison-Bighorn aquifer; and the Flathead Sandstone. Operating yields commonly are more than 1,000 gallons per minute from flowing wells completed in the Madison-Bighorn aquifer. The initial test of one well indicated a flow of 14,000 gallons per minute. Wellhead pressures range from less than 50 to more than 400 pounds per square inch. Transmissivities are 500-1,900 feet squared per day for the Madison-Bighorn aquifer and 90-325 feet squared per day for the Tensleep and Flathead Sandstones. Despite extensive development for irrigation there have been few decreases in pressure. Some decreases in pressure have occurred in wells completed in the Flathead Sandstone. Fractures along linear structural features result in significant secondary permeability and allow upward interformational movement of water that affects the altitude of the potentiometric surfaces in the Tensleep Sandstone and Madison-Bighorn aquifer. Upward-moving water from the Tensleep and other formations discharges at the land surface as springs along or near these lineations. Water from the aquifers generally contains minimal concentrations of dissolved solids and individual constituents but has excessive hardness. The water is satisfactory for irrigation and other purposes when hardness is not a detrimental factor. Wellhead temperatures range from 11 degrees to 27.5 degrees C, giving a geothermal gradient of about 0.44 degrees C per 100 feet. (USGS)

Spatial and temporal variability of water salinity in an ephemeral, arid-zone river, central Australia

NASA Astrophysics Data System (ADS)

Costelloe, Justin F.; Grayson, Rodger B.; McMahon, Thomas A.; Argent, Robert M.

2005-10-01

This study describes the spatial and temporal variability of water salinity of the Neales-Peake, an ephemeral river system in the arid Lake Eyre basin of central Australia. Saline to hypersaline waterholes occur in the lower reaches of the Neales-Peake catchment and lie downstream of subcatchments containing artesian mound springs. Flood pulses are fresh in the upper reaches of the rivers (<200 mg l-1). In the salt-affected reaches, flood pulses become increasingly saline during their recession. It is hypothesized that leakage from the Great Artesian Basin deposits salt at the surface. This salt is then transported by infrequent runoff events into the main river system over long periods of time. The bank/floodplain store downstream of salt-affected catchments contains high salt concentrations, and this salt is mobilized during the flow recession when bank/floodplain storage discharges into the channel. The salinity of the recession increases as the percentage of flow derived from this storage increases. A simple conceptual model was developed for investigating the salt movement processes during flow events. The model structure for transport of water and salt in the Neales-Peake catchment generated similar spatial and temporal patterns of salt distribution in the floodplain/bank storage and water flow as observed during flow events in 2000-02. However, more field-data collection and modelling are required for improved calibration and description of salt transport and storage processes, particularly with regard to the number of stores required to represent the salt distribution in the upper zone of the soil profile.

Regeneration of a confined aquifer after redevelopment and decommission of artesian wells, example from Grafendorf aquifer (Styria, Austria)

NASA Astrophysics Data System (ADS)

Mehmedovski, Nudzejma; Winkler, Gerfried

2016-04-01

Water is essential for life and it is therefore necessary to protect drinking water sustainably. Compared to shallow groundwater, deeper groundwater is especially important due to its characteristic tendency to remain extensively unaffected by environmental impacts. Thus, the uncontrolled waste of this valuable resource has to be avoided. A lot of artesian wells have been established in Grafendorf bei Hartberg (Styria, Austria). Almost all wells were not state-of-the art. As a result the different aquifer horizons began to intermix. Additionally some of the artesian wells had a permanent free overflow and the water was not even used. Consequently, since 1950, where the mean discharge of 37 wells was 0,334 l/s per well, the discharge has decreased to 0,090 l/s until 2013, which means a decline of about 75 %. As a reaction to these declines a decommissioning campaign was conducted where 69 artesian wells have been closed by injecting a cement-bentonite suspension (ratio 3:1). The Grafendorf aquifer is situated in the Styrian Basin and consists of 5 separated artesian horizons in Neogene sediments. These artesian horizons range from 42 m (1st horizon) to 176 m (5th horizon) and mostly consist of sand, partly of fine/medium/coarse gravel and partially with minor clay content. In order to analyse the reaction of the Grafendorf aquifer to these redevelopments, 5 monitoring wells could be used for the analysis. Some monitoring wells include different aquifer horizons and hydraulically short cut them. Thus, in this work the analysis focus on the general trend of the whole aquifer system neglecting the individual interactions between the different aquifers. In a first investigation step the hydraulic properties of the aquifer system has been determined using pumping tests which were analysed with different analytical solutions with the software AQTESOLV. Overall the pumping test solutions hardly differ in the transmissivity and hydraulic conductivity. On the contrary the results for the storativity and specific storativity differ highly which was used to determine the proper analytic solution. The average transmissivity is about 9 x 10-4 m2/s and the hydraulic conductivity is about 1,5 x 10-4 m/s. The watertable trends of the 5 observed wells were analysed. The preliminary results show an increase of the watertable between 0,10 m to 0,40 m in 3 wells and even 0,1 bar (1 m) in one well. In one well a decline of 3 m can be observed since the wells have been decommissioned. However the regeneration of the aquifer has been mostly positive so far, nevertheless more studies have to be done in future to prove a long-term behaviour of the aquifer and in particular to investigate the reaction of the individual horizons and the interaction between them.

Axial charges of octet and decuplet baryons in a perturbative chiral quark model

NASA Astrophysics Data System (ADS)

Liu, X. Y.; Samart, D.; Khosonthongkee, K.; Limphirat, A.; Xu, K.; Yan, Y.

2018-05-01

Using the perturbative chiral quark model (PCQM), we investigate and predict in this work axial charges gAB of octet and decuplet N , Σ , Ξ , Δ , Σ*, and Ξ* baryons, considering both the ground and excited states in the quark propagator. The PCQM predictions are in good agreement with the experimental data, lattice-QCD values, and other approaches. In addition, the study reveals that the meson cloud is influential in the PCQM, contributing around 30% to the total values of gAB, and the meson cloud contribution to gAB stems mainly from the diagrams with the ground-state quark propagator while the excited intermediate quark states reduce gAB by 10-20%.

Groundwater residence time and paleohydrology in the Baltic Artesian basin:isotope geochemical data

NASA Astrophysics Data System (ADS)

Vaikmae, R.; Gerber, C.; Purtschert, R.; Aeschbach, W.; Raidla, V., Sr.; Lu, Z. T.; Zappala, J. C.; Mueller, P.; Mokrik, R., Sr.; Jiang, W.

2016-12-01

In this study of the Cambrian aquifer system(CAS) in the Baltic Artesian Basin(BAS) (, chemistry, stable isotopes, noble gas measurements, and dating tracers were combined for study the flow and recharge dynamics of the system over the last million years We find that the variability in chemical composition, stable isotopes and noble gas content in the basin is predominately controlled by mixing of three distinct water masses: Holocene and Pleistocene interglacial water, glacial meltwater, and brine. 81Kr is a nearly ideal dating tracer for such old systems. The radiogenic 4He and 40Ar provide additional information, but are more difficult to interpret in terms of groundwater age. In this study, we did not consider diffusive loss of 81Kr to stagnant water, which might result in an overestimation of groundwater ages ). However, the relatively high porosity and large thickness of the CAS, together with the presumed high salinity and low Kr content of the stagnant water all diminish the effect of diffusive 81Kr loss on age estimates. Our results confirm that under normal conditions, underground production of 81Kr is not affecting the dating results. 81Kr, 4He, and 40Ar all indicate a residence time of the brine of more than 1-3 Ma. Some uncertainty about the brine formation process remains, but the combination of chemical and stable isotope composition of the brine, noble gas concentrations and dating results favors evaporative enrichment of seawater. Tracer ages of interglacial water and glacial meltwater are on the order of several hundred thousand years, which means that several reversals of the flow direction in the CAS as a result of the paleoclimatology of the area have to be taken into account. Under such conditions, small vertical leakage, through fracture zones for example, might considerably impact the net flow pattern. Due to the cyclic flow direction reversals, the aquifer was probably in a transient state over most of the last 1 Ma period.

Negative Suppressors of Oncogenic Activation of the Met Receptor Tyrosine Kinase

DTIC Science & Technology

2008-09-01

However, using anti-ubiquitin antibodies , we observe no increase in Met ubiquitination in Gab1 over-expressing cells when compared to vector controls...highlights an unsuspected role for Gab1 in RTK homeostasis. 11 Materials and Methods Reagents, Antibodies , Cell culture and Transfections A...its oncogenic activation through deregulate endocytosis. My recent work has uncovered a novel role for the Gab1 scaffold in regulating Met signaling

Psychiatric symptoms and same-sex sexual attraction and behavior in light of childhood gender atypical behavior and parental relationships.

PubMed

Alanko, Katarina; Santtila, Pekka; Witting, Katarina; Varjonen, Markus; Jern, Patrik; Johansson, Ada; von der Pahlen, Bettina; Kenneth Sandnabba, N

2009-01-01

This study explores the relation between the level of current symptoms of depression and anxiety and recalled childhood gender atypical behavior (GAB), and quality of relationships with parents among men and women who reported same-sex sexual attraction or engaged in same-sex sexual behavior and men and women who did not. Matched pairs, 79 men (n = 158) and 148 women (n = 296), with equal levels of GAB were created of Finnish participants with either same-sex sexual attraction or behavior and participants without. The measures used were retrospective questionnaires. Ratings of maternal and paternal over-control and coldness differed as a function of same-sex sexual attraction or behavior. Childhood GAB was correlated with negative ratings of parental relationships. Both same-sex sexual attraction or behavior and a history of childhood GAB affected the reported levels of current depression and anxiety. Only gender typical participants with no same-sex sexual attraction or behavior reported significantly lower levels of symptoms. The findings suggest that childhood GAB is related to later distress both among hetero- and homosexual individuals. The elevated level of psychological distress among homosexual individuals, reported in several studies, might--to some extent--be caused by their generally higher levels of childhood GAB as opposed to a homosexual orientation per se.

Deletion of Gab2 in mice protects against hepatic steatosis and steatohepatitis: a novel therapeutic target for fatty liver disease.

PubMed

Chen, Shuai; Kang, Yujia; Sun, Yan; Zhong, Yanhong; Li, Yanli; Deng, Lijuan; Tao, Jin; Li, Yang; Tian, Yingpu; Zhao, Yinan; Cheng, Jianghong; Liu, Wenjie; Feng, Gen-Sheng; Lu, Zhongxian

2016-12-01

Fatty liver disease is a serious health problem worldwide and is the most common cause for chronic liver disease and metabolic disorders. The major challenge in the prevention and intervention of this disease is the incomplete understanding of the underlying mechanism and thus lack of potent therapeutic targets due to multifaceted and interdependent disease factors. In this study, we investigated the role of a signaling adaptor protein, GRB2-associated-binding protein 2 (Gab2), in fatty liver using an animal disease model. Gab2 expression in hepatocytes responded to various disease factor stimulations, and Gab2 knockout mice exhibited resistance to fat-induced obesity, fat- or alcohol-stimulated hepatic steatosis, as well as methionine and choline deficiency-induced steatohepatitis. Concordantly, the forced expression or knockdown of Gab2 enhanced or diminished oleic acid (OA)- or ethanol-induced lipid production in hepatocytes in vitro, respectively. During lipid accumulation in hepatocytes, both fat and alcohol induced the recruitment of PI3K or Socs3 by Gab2 and the activation of their downstream signaling proteins AKT, ERK, and Stat3. Therefore, Gab2 may be a disease-associated protein that is induced by pathogenic factors to amplify and coordinate multifactor-induced signals to govern disease development in the liver. Our research provides a novel potential target for the prevention and intervention of fatty liver disease. © The Author (2016). Published by Oxford University Press on behalf of Journal of Molecular Cell Biology, IBCB, SIBS, CAS.

Epidermal growth factor-induced phosphatidylinositol 3-kinase activation and DNA synthesis. Identification of Grb2-associated binder 2 as the major mediator in rat hepatocytes.

PubMed

Kong, M; Mounier, C; Wu, J; Posner, B I

2000-11-17

In previous work we showed that the phosphatidylinositol 3-kinase (PI3-kinase), not the mitogen-activated protein kinase, pathway is necessary and sufficient to account for insulin- and epidermal growth factor (EGF)-induced DNA synthesis in rat hepatocytes. Here, using a dominant-negative p85, we confirmed the key role of EGF-induced PI3-kinase activation and sought to identify the mechanism by which this is effected. Our results show that EGF activates PI3-kinase with a time course similar to that of the association of p85 with three principal phosphotyrosine proteins (i. e. PY180, PY105, and PY52). We demonstrated that each formed a distinct p85-associated complex. PY180 and PY52 each constituted about 10% of EGF-activated PI3-kinase, whereas PY105 was responsible for 80%. PY105 associated with Grb2 and SHP-2, and although it behaved like Gab1, none of the latter was detected in rat liver. We therefore cloned a cDNA from rat liver, which was found to be 95% homologous to the mouse Grb2-associated binder 2 (Gab2) cDNA sequence. Using a specific Gab2 antibody, we demonstrated its expression in and association with p85, SHP-2, and Grb2 upon EGF treatment of rat hepatocytes. Gab2 accounted for most if not all of the PY105 species, since immunoprecipitation of Gab2 with specific antibodies demonstrated parallel immunodepletion of Gab2 and PY105 from the residual supernatants. We also found that the PI3-kinase activity associated with Gab2 was totally abolished by dominant negative p85. Thus, Gab2 appears to be the principal EGF-induced PY protein recruiting and activating PI3-kinase and mitogenesis.

Negative Suppressors of Oncogenic Activation of the Met Receptor Tyrosine Kinase

DTIC Science & Technology

2007-03-01

transfected with HA Gab1 , cells were stimulated, fixed with 3% PFA and stained with antibodies against HA (green) and endogenous Met (red). White...oncogenic activation through deregulate endocytosis. My recent work has uncovered a novel role for the Gab1 scaffold in regulating Met internalization and...I show that Gab1 localizes to CDRs and recruits the Met receptor to this plasma membrane compartment where receptors are then internalized into the

Ground water in the Pullman area, Whitman County, Washington

USGS Publications Warehouse

Foxworthy, B.L.; Washburn, R.L.

1963-01-01

This report presents the results of an investigation of the ground-water resources of the Pullman area, Whitman County, Wash. The investigation war made in cooperation with the State of Washington, Department of Conservation, Division of Water Resources, to determine whether the 1959 rate of ground-water withdrawal exceeded the perennial yield of the developed aquifers, and if so, (1) whether additional aquifers could be developed in the area, and (2) whether the yield of the developed aquifers could be increased by artificial recharge. The Pullman area includes the agricultural district surrounding the city of Pullman, in southeastern Whitman County, and the western two-thirds of the Moscow-Pullman basin, which extends into Latah County, Idaho. The mapped area comprises shout 250 square miles. The area is in a region of smooth rolling hills formed by erosion of thick deposits of loess, which cover a dissected lava plain. The loess (Palouse formation of Pleistocene age) ranges in thickness from less than 1 foot to more than 150 feet. The underlying lava flows, part of the Columbia River basalt of Tertiary age, are nearly horizontal and form bluffs and low cliffs along the major streams. The total thickness of the basalt sequence in the area is not known, but it may be considerably greater than 1,000 feet beneath the city of Pullman. The basalt sequence is underlain by a basement mass of granite, granite gneiss, and quartzite, of pre-Tertiary age. The most productive aquifers in the area are in the Columbia River basalt. They consist of the permeable zones, commonly occurring at the tops of individual lava flows, which may contain ground water under either artesian or water-table conditions. Two such permeable zones have produced more than 95 percent of the ground water used in the Pullman area, or as much as 870 million gallons per year (1957). These two zones are hydraulically connected and lie at depths ranging from about 50 to 170 feet below the land surface at Pullman. The area receives about 21 inches of precipitation annually, about two-thirds of it from October through March. 0nly a fraction of the precipitation reaches the aquifers; the remainder is returned to the atmosphere by evapotranspiration or leaves the area as surface runoff. The basalt is recharged mainly by infiltration from streams and downward percolation from the overlying loess. The ground water moves generally westward. However, most water in the artesian aquifers tapped by wells in the vicinity of Pullman may move toward the city of Pullman, which is the center of major pumping. The rate of movement ranges from extremely slow in the loess and the massive basalt to very rapid in the permeable zones of basalt. The principal modes of discharge from the artesian aquifers are seepage to streams and pumpage from wells. The amount of natural discharge is unknown, but the pumpage ranged from about 340 to 870 million gallons per year, and during 1949-59 it averaged about 800 million gallons (2,500 ac-ft) per year. For about the last 25 years at least, the piezometric surface of the artesian zones has declined each year, indicating that the annual ground-water discharge from the artesian aquifers (including pumpage and natural discharge) has exceeded the recharge in the Pullman area. An analysis of the relation of pumpage to the decline in artesian level indicates that during 1952-59 an average of about 65 million gallons per year was removed from storage. Although the decline in artesian pressures has resulted in an increase in the recharge to the aquifers, the present rate of pumping may be equal to or even exceed the perennial yield of the artesian aquifer in the report area under natural conditions. Geologic and hydrologic conditions seem favorable for the existence of potentially good aquifers below those which are now extensively developed. The deep aquifers seem to have only a slight hydraulic connection with the overlying artesian basalt

Breaking wind to survive: fishes that breathe air with their gut.

PubMed

Nelson, J A

2014-03-01

Several taxonomically disparate groups of fishes have evolved the ability to extract oxygen from the air with elements of their gut. Despite perceived difficulties with balancing digestive and respiratory function, gut air breathing (GAB) has evolved multiple times in fishes and several GAB families are among the most successful fish families in terms of species numbers. When gut segments evolve into an air-breathing organ (ABO), there is generally a specialized region for exchange of gases where the gut wall has diminished, vascularization has increased, capillaries have penetrated into the luminal epithelium and surfactant is produced. This specialized region is generally separated from digestive portions of the gut by sphincters. GAB fishes tend to be facultative air breathers that use air breathing to supplement aquatic respiration in hypoxic waters. Some hindgut breathers may be continuous, but not obligate air breathers (obligate air breathers drown if denied access to air). Gut ABOs are generally used only for oxygen uptake; CO₂ elimination seems to occur via the gills and skin in all GAB fishes studied. Aerial ventilation in GAB fishes is driven primarily by oxygen partial pressure of the water (PO₂) and possibly also by metabolic demand. The effect of aerial ventilation on branchial ventilation and the cardiovascular system is complex and generalizations across taxa or ABO type are not currently possible. Blood from GAB fishes generally has a low blood oxygen partial pressure that half saturates haemoglobin (p50) with a very low erythrocytic nucleoside triphosphate concentration [NTP]. GAB behaviour in nature depends on the social and ecological context of the animal as well as on physiological factors. © 2014 The Fisheries Society of the British Isles.

Gab1 is essential for membrane translocation, activity and integrity of mTORCs after EGF stimulation in urothelial cell carcinoma

PubMed Central

Chang, Chi-Hao; Chan, Po-Chao; Li, Jian-Ri; Chen, Chun-Jung; Shieh, Jeng-Jer; Fu, Yun-Ching; Chen, Hong-Chen; Wu, Ming-Ju

2015-01-01

Urothelial carcinoma is the most common type of malignancy in long-term dialysis patients and kidney transplant recipients in Taiwan. mTORCs (mammalian target of rapamycin complexes) and EGF are important in urothelial carcinoma. To identify the regulation of mTORCs upon EGF stimulation is necessary. mTOR integrates signals from growth factors via mTOR Complex 1 (mTORC1) and mTOR Complex 2 (mTORC2). The mechanism of mTORC1 action has been widely studied; however, the regulation of mTORC2 has not been well studied. Here, we demonstrate that Gab1 is an important upstream regulator in EGF-mediated activation of mTORCs. In our study, we confirm that mTORCs translocate from the cytoplasm to the plasma membrane via the PH domain of Gab1 upon EGF stimulation. Moreover, Gab1 associates with mTORCs. This association stabilizes the integrity of mTORCs and induces mTORC activity. Compared to normal bladder tissue, the expression of Gab1 and activity of mTORCs are elevated in urothelial carcinoma. Collectively, our results suggest that Gab1 is an essential regulator of the EGF-mediated mTORC pathways and may potentially be used as a biomarker for urothelial carcinoma to predict diagnosis and drug response. PMID:25596749

Targeted nanoconjugate co-delivering siRNA and tyrosine kinase inhibitor to KRAS mutant NSCLC dissociates GAB1-SHP2 post oncogene knockdown.

PubMed

Srikar, R; Suresh, Dhananjay; Zambre, Ajit; Taylor, Kristen; Chapman, Sarah; Leevy, Matthew; Upendran, Anandhi; Kannan, Raghuraman

2016-08-17

A tri-block nanoparticle (TBN) comprising of an enzymatically cleavable porous gelatin nanocore encapsulated with gefitinib (tyrosine kinase inhibitor (TKI)) and surface functionalized with cetuximab-siRNA conjugate has been synthesized. Targeted delivery of siRNA to undruggable KRAS mutated non-small cell lung cancer cells would sensitize the cells to TKI drugs and offers an efficient therapy for treating cancer; however, efficient delivery of siRNA and releasing it in cytoplasm remains a major challenge. We have shown TBN can efficiently deliver siRNA to cytoplasm of KRAS mutant H23 Non-Small Cell Lung Cancer (NSCLC) cells for oncogene knockdown; subsequently, sensitizing it to TKI. In the absence of TKI, the nanoparticle showed minimal toxicity suggesting that the cells adapt a parallel GAB1 mediated survival pathway. In H23 cells, activated ERK results in phosphorylation of GAB1 on serine and threonine residues to form GAB1-p85 PI3K complex. In the absence of TKI, knocking down the oncogene dephosphorylated ERK, and negated the complex formation. This event led to tyrosine phosphorylation at Tyr627 domain of GAB1 that regulated EGFR signaling by recruiting SHP2. In the presence of TKI, GAB1-SHP2 dissociation occurs, leading to cell death. The outcome of this study provides a promising platform for treating NSCLC patients harboring KRAS mutation.

Targeted nanoconjugate co-delivering siRNA and tyrosine kinase inhibitor to KRAS mutant NSCLC dissociates GAB1-SHP2 post oncogene knockdown

NASA Astrophysics Data System (ADS)

Srikar, R.; Suresh, Dhananjay; Zambre, Ajit; Taylor, Kristen; Chapman, Sarah; Leevy, Matthew; Upendran, Anandhi; Kannan, Raghuraman

2016-08-01

A tri-block nanoparticle (TBN) comprising of an enzymatically cleavable porous gelatin nanocore encapsulated with gefitinib (tyrosine kinase inhibitor (TKI)) and surface functionalized with cetuximab-siRNA conjugate has been synthesized. Targeted delivery of siRNA to undruggable KRAS mutated non-small cell lung cancer cells would sensitize the cells to TKI drugs and offers an efficient therapy for treating cancer; however, efficient delivery of siRNA and releasing it in cytoplasm remains a major challenge. We have shown TBN can efficiently deliver siRNA to cytoplasm of KRAS mutant H23 Non-Small Cell Lung Cancer (NSCLC) cells for oncogene knockdown; subsequently, sensitizing it to TKI. In the absence of TKI, the nanoparticle showed minimal toxicity suggesting that the cells adapt a parallel GAB1 mediated survival pathway. In H23 cells, activated ERK results in phosphorylation of GAB1 on serine and threonine residues to form GAB1-p85 PI3K complex. In the absence of TKI, knocking down the oncogene dephosphorylated ERK, and negated the complex formation. This event led to tyrosine phosphorylation at Tyr627 domain of GAB1 that regulated EGFR signaling by recruiting SHP2. In the presence of TKI, GAB1-SHP2 dissociation occurs, leading to cell death. The outcome of this study provides a promising platform for treating NSCLC patients harboring KRAS mutation.

Distinct Involvement of the Gab1 and Grb2 Adaptor Proteins in Signal Transduction by the Related Receptor Tyrosine Kinases RON and MET

PubMed Central

Chaudhuri, Amitabha; Xie, Ming-Hong; Yang, Becky; Mahapatra, Kaushiki; Liu, Jinfeng; Marsters, Scot; Bodepudi, Sweta; Ashkenazi, Avi

2011-01-01

Although the signal transduction mechanisms of the receptor tyrosine kinase MET are well defined, less is known about its close relative RON. MET initiates intracellular signaling by autophosphorylation on specific cytoplasmic tyrosines that form docking sites for the adaptor proteins Grb2 and Gab1. Grb2 binds directly and is essential for all of the biological activities of MET. Gab1 docks either directly or indirectly via Grb2 and controls only a subset of MET functions. Because MET and RON possess similar adaptor binding sites, it was anticipated that their adaptor interactions would be conserved. Here we show that in contrast to MET, RON relies primarily on Gab1 for signal transmission. Surprisingly, disruption of the Grb2 docking site of RON or Grb2 depletion augments activity, whereas enhancement of Grb2 binding attenuates Gab1 recruitment and signaling. Hence, RON and MET differ in their adaptor interactions; furthermore, Grb2 performs a novel antagonistic role in the context of RON signaling. PMID:21784853

Mapping the Critical Gestational Age at Birth that Alters Brain Development in Preterm-born Infants using Multi-Modal MRI

PubMed Central

Wu, Dan; Chang, Linda; Akazawa, Kentaro; Oishi, Kumiko; Skranes, Jon; Ernst, Thomas; Oishi, Kenichi

2017-01-01

Preterm birth adversely affects postnatal brain development. In order to investigate the critical gestational age at birth (GAB) that alters the developmental trajectory of gray and white matter structures in the brain, we investigated diffusion tensor and quantitative T2 mapping data in 43 term-born and 43 preterm-born infants. A novel multivariate linear model—the change point model, was applied to detect change points in fractional anisotropy, mean diffusivity, and T2 relaxation time. Change points captured the “critical” GAB value associated with a change in the linear relation between GAB and MRI measures. The analysis was performed in 126 regions across the whole brain using an atlas-based image quantification approach to investigate the spatial pattern of the critical GAB. Our results demonstrate that the critical GABs are region- and modality-specific, generally following a central-to-peripheral and bottom-to-top order of structural development. This study may offer unique insights into the postnatal neurological development associated with differential degrees of preterm birth. PMID:28111189

Mapping the critical gestational age at birth that alters brain development in preterm-born infants using multi-modal MRI.

PubMed

Wu, Dan; Chang, Linda; Akazawa, Kentaro; Oishi, Kumiko; Skranes, Jon; Ernst, Thomas; Oishi, Kenichi

2017-04-01

Preterm birth adversely affects postnatal brain development. In order to investigate the critical gestational age at birth (GAB) that alters the developmental trajectory of gray and white matter structures in the brain, we investigated diffusion tensor and quantitative T2 mapping data in 43 term-born and 43 preterm-born infants. A novel multivariate linear model-the change point model, was applied to detect change points in fractional anisotropy, mean diffusivity, and T2 relaxation time. Change points captured the "critical" GAB value associated with a change in the linear relation between GAB and MRI measures. The analysis was performed in 126 regions across the whole brain using an atlas-based image quantification approach to investigate the spatial pattern of the critical GAB. Our results demonstrate that the critical GABs are region- and modality-specific, generally following a central-to-peripheral and bottom-to-top order of structural development. This study may offer unique insights into the postnatal neurological development associated with differential degrees of preterm birth. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

A multi-tracer study in the Hutton Sandstone aquifer, Australia: How "wrong ages" give us deeper insights into aquifer structure and effective deep recharge to a double porosity system

NASA Astrophysics Data System (ADS)

Suckow, Axel; Taylor, Andrew; Davies, Phil; Leaney, Fred

2017-04-01

Depressurisation of coal seams in the Walloon Coal Measures in Queensland, Australia, may influence aquifers both over- and underlying the formation. The Gubberamunda Sandstone aquifer, which overlies the Walloon Coal Measures, is the starting point of the Great Artesian Basin (GAB) flow system and has been the focus of numerous recharge studies. In comparison, the Hutton Sandstone aquifer, which underlies the Walloon Coal Measures, has received much less attention. This aquifer however, is the main supply of stock water for the beef industry in the area. A multi-environmental tracer study of the Hutton Sandstone aquifer was undertaken at the Mimosa Syncline and was complemented by a few samples taken from the underlying Precipice Sandstone aquifer. This multi-tracer study (comprising 18O, 2H, 3H, CFCs, SF6, 14C, 36Cl, and 4He) demonstrated that the Hutton Sandstone aquifer behaves as a double porosity system. At the regional scale, the system features a relatively small fraction of conductive rock within a fairly large fraction of low permeability rock. Tracer migration therefore occurs mainly by advection in the conductive fraction and mainly by diffusion in the low-permeability fraction of the aquifer. Groundwater flow velocities, derived from exponential decrease of 14C and 36Cl concentrations with distance, differ by a factor of ten and therefore do not indicate the real groundwater flow velocity. However, accounting for a double porosity interpretation of the tracer data leads to a single groundwater flow velocity that is consistent with all observed data. Advective velocity in this double porosity model differs from face value flow velocities derived from 14C and 36Cl by a factor of 4 and 40 respectively. As a consequence of this interpretation, the deeper groundwater flow system of the Hutton Sandstone aquifer is estimated to receive only 3% of the recharge previously estimated using the Chloride Mass Balance approach at the intake beds. The other 97% is assumed to be rejected recharge which discharges through spring complexes in the Surat Basin and contributes to base flow of the Dawson River. This interpretation also suggests: 1) that the Hutton Sandstone aquifer is potentially more vulnerable to impacts from groundwater abstraction, including from stock and domestic water supply and coal seam gas production, than previously anticipated; 2) that other "groundwater age records" around the world likely observe similar double porosity effects and their apparent ages may be similarly distorted; and 3) that the multi-tracer approach used here is a suitable method for identifying other previously unknown double porosity aquifer systems and can potentially quantify deep effective recharge where important water resources are subject of economic development.

Identification of GRB2 and GAB1 Coexpression as an Unfavorable Prognostic Factor for Hepatocellular Carcinoma by a Combination of Expression Profile and Network Analysis

PubMed Central

Yang, Mei; Wang, Danhua; Yu, Lingxiang; Guo, Chaonan; Guo, Xiaodong; Lin, Na

2013-01-01

Aim To screen novel markers for hepatocellular carcinoma (HCC) by a combination of expression profile, interaction network analysis and clinical validation. Methods HCC significant molecules which are differentially expressed or had genetic variations in HCC tissues were obtained from five existing HCC related databases (OncoDB.HCC, HCC.net, dbHCCvar, EHCO and Liverome). Then, the protein-protein interaction (PPI) network of these molecules was constructed. Three topological features of the network ('Degree', 'Betweenness', and 'Closeness') and the k-core algorithm were used to screen candidate HCC markers which play crucial roles in tumorigenesis of HCC. Furthermore, the clinical significance of two candidate HCC markers growth factor receptor-bound 2 (GRB2) and GRB2-associated-binding protein 1 (GAB1) was validated. Results In total, 6179 HCC significant genes and 977 HCC significant proteins were collected from existing HCC related databases. After network analysis, 331 candidate HCC markers were identified. Especially, GAB1 has the highest k-coreness suggesting its central localization in HCC related network, and the interaction between GRB2 and GAB1 has the largest edge-betweenness implying it may be biologically important to the function of HCC related network. As the results of clinical validation, the expression levels of both GRB2 and GAB1 proteins were significantly higher in HCC tissues than those in their adjacent nonneoplastic tissues. More importantly, the combined GRB2 and GAB1 protein expression was significantly associated with aggressive tumor progression and poor prognosis in patients with HCC. Conclusion This study provided an integrative analysis by combining expression profile and interaction network analysis to identify a list of biologically significant HCC related markers and pathways. Further experimental validation indicated that the aberrant expression of GRB2 and GAB1 proteins may be strongly related to tumor progression and prognosis in patients with HCC. The overexpression of GRB2 in combination with upregulation of GAB1 may be an unfavorable prognostic factor for HCC. PMID:24391994

Using 81Kr and noble gases to characterize and date groundwater and brines in the Baltic Artesian Basin on the one-million-year timescale

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gerber, Christoph; Vaikmae, Rein; Aeschbach, Werner

Analyses for 81Kr and noble gases on groundwater from the deepest aquifer system of the Baltic Artesian Basin (BAB) were performed to determine groundwater ages and uncover the flow dynamics of the system on a timescale of several hundred thousand years. We find that the system is controlled by mixing of three distinct water masses: Interglacial or recent meteoric water (δ 18O ≈ –10.4‰) with a poorly evolved chemical and noble gas signature, glacial meltwater (δ 18O ≤ –18‰) with elevated noble gas concentrations, and an old, high-salinity brine component (δ 18O ≥ –4.5‰, ≥ 90 g Cl –/L) withmore » strongly depleted atmospheric noble gas concentrations. The 81Kr measurements are interpreted within this mixing framework to estimate the age of the end-members. Deconvoluted 81Kr ages range from 300 ka to 1.3 Ma for interglacial or recent meteoric water and glacial meltwater. For the brine component, ages exceed the dating range of the ATTA-3 instrument of 1.3 Ma. The radiogenic noble gas components 4He* and 40Ar* are less conclusive but also support an age of > 1 Ma for the brine. Based on the chemical and noble gas concentrations and the dating results, we conclude that the brine originates from evaporated seawater that has been modified by later water–rock interaction. Furthermore, as the obtained tracer ages cover several glacial cycles, we discuss the impact of the glacial cycles on flow patterns in the studied aquifer system.« less

Using 81Kr and noble gases to characterize and date groundwater and brines in the Baltic Artesian Basin on the one-million-year timescale

DOE PAGES

Gerber, Christoph; Vaikmae, Rein; Aeschbach, Werner; ...

2017-01-31

Analyses for 81Kr and noble gases on groundwater from the deepest aquifer system of the Baltic Artesian Basin (BAB) were performed to determine groundwater ages and uncover the flow dynamics of the system on a timescale of several hundred thousand years. We find that the system is controlled by mixing of three distinct water masses: Interglacial or recent meteoric water (δ 18O ≈ –10.4‰) with a poorly evolved chemical and noble gas signature, glacial meltwater (δ 18O ≤ –18‰) with elevated noble gas concentrations, and an old, high-salinity brine component (δ 18O ≥ –4.5‰, ≥ 90 g Cl –/L) withmore » strongly depleted atmospheric noble gas concentrations. The 81Kr measurements are interpreted within this mixing framework to estimate the age of the end-members. Deconvoluted 81Kr ages range from 300 ka to 1.3 Ma for interglacial or recent meteoric water and glacial meltwater. For the brine component, ages exceed the dating range of the ATTA-3 instrument of 1.3 Ma. The radiogenic noble gas components 4He* and 40Ar* are less conclusive but also support an age of > 1 Ma for the brine. Based on the chemical and noble gas concentrations and the dating results, we conclude that the brine originates from evaporated seawater that has been modified by later water–rock interaction. Furthermore, as the obtained tracer ages cover several glacial cycles, we discuss the impact of the glacial cycles on flow patterns in the studied aquifer system.« less

Targeted nanoconjugate co-delivering siRNA and tyrosine kinase inhibitor to KRAS mutant NSCLC dissociates GAB1-SHP2 post oncogene knockdown

PubMed Central

Srikar, R.; Suresh, Dhananjay; Zambre, Ajit; Taylor, Kristen; Chapman, Sarah; Leevy, Matthew; Upendran, Anandhi; Kannan, Raghuraman

2016-01-01

A tri-block nanoparticle (TBN) comprising of an enzymatically cleavable porous gelatin nanocore encapsulated with gefitinib (tyrosine kinase inhibitor (TKI)) and surface functionalized with cetuximab-siRNA conjugate has been synthesized. Targeted delivery of siRNA to undruggable KRAS mutated non-small cell lung cancer cells would sensitize the cells to TKI drugs and offers an efficient therapy for treating cancer; however, efficient delivery of siRNA and releasing it in cytoplasm remains a major challenge. We have shown TBN can efficiently deliver siRNA to cytoplasm of KRAS mutant H23 Non-Small Cell Lung Cancer (NSCLC) cells for oncogene knockdown; subsequently, sensitizing it to TKI. In the absence of TKI, the nanoparticle showed minimal toxicity suggesting that the cells adapt a parallel GAB1 mediated survival pathway. In H23 cells, activated ERK results in phosphorylation of GAB1 on serine and threonine residues to form GAB1-p85 PI3K complex. In the absence of TKI, knocking down the oncogene dephosphorylated ERK, and negated the complex formation. This event led to tyrosine phosphorylation at Tyr627 domain of GAB1 that regulated EGFR signaling by recruiting SHP2. In the presence of TKI, GAB1-SHP2 dissociation occurs, leading to cell death. The outcome of this study provides a promising platform for treating NSCLC patients harboring KRAS mutation. PMID:27530552

Novel Role for p21-activated Kinase 2 in Thrombin-induced Monocyte Migration*

PubMed Central

Gadepalli, Ravisekhar; Kotla, Sivareddy; Heckle, Mark R.; Verma, Shailendra K.; Singh, Nikhlesh K.; Rao, Gadiparthi N.

2013-01-01

To understand the role of thrombin in inflammation, we tested its effects on migration of THP-1 cells, a human monocytic cell line. Thrombin induced THP-1 cell migration in a dose-dependent manner. Thrombin induced tyrosine phosphorylation of Pyk2, Gab1, and p115 RhoGEF, leading to Rac1- and RhoA-dependent Pak2 activation. Downstream to Pyk2, Gab1 formed a complex with p115 RhoGEF involving their pleckstrin homology domains. Furthermore, inhibition or depletion of Pyk2, Gab1, p115 RhoGEF, Rac1, RhoA, or Pak2 levels substantially attenuated thrombin-induced THP-1 cell F-actin cytoskeletal remodeling and migration. Inhibition or depletion of PAR1 also blocked thrombin-induced activation of Pyk2, Gab1, p115 RhoGEF, Rac1, RhoA, and Pak2, resulting in diminished THP-1 cell F-actin cytoskeletal remodeling and migration. Similarly, depletion of Gα12 negated thrombin-induced Pyk2, Gab1, p115 RhoGEF, Rac1, RhoA, and Pak2 activation, leading to attenuation of THP-1 cell F-actin cytoskeletal remodeling and migration. These novel observations reveal that thrombin induces monocyte/macrophage migration via PAR1-Gα12-dependent Pyk2-mediated Gab1 and p115 RhoGEF interactions, leading to Rac1- and RhoA-targeted Pak2 activation. Thus, these findings provide mechanistic evidence for the role of thrombin and its receptor PAR1 in inflammation. PMID:24025335

ASSOCIATION BETWEEN GAB2 HAPLOTYPE AND HIGHER GLUCOSE METABOLISM IN ALZHEIMER'S DISEASE-AFFECTED BRAIN REGIONS IN COGNITIVELY NORMAL APOEε4 CARRIERS

PubMed Central

Liang, Winnie S.; Chen, Kewei; Lee, Wendy; Sidhar, Kunal; Corneveaux, Jason J.; Allen, April N.; Myers, Amanda; Villa, Stephen; Meechoovet, Bessie; Pruzin, Jeremy; Bandy, Daniel; Fleisher, Adam S.; Langbaum, Jessica B.S.; Huentelman, Matthew J.; Jensen, Kendall; Dunckley, Travis; Caselli, Richard J.; Kaib, Susan; Reiman, Eric M.

2010-01-01

In a genome-wide association study (GWAS) of late-onset Alzheimer's disease (AD), we found an association between common haplotypes of the GAB2 gene and AD risk in carriers of the apolipoprotein E (APOE) ε4 allele, the major late-onset AD susceptibility gene. We previously proposed the use of fluorodeoxyglucose positron emission tomography (FDG-PET) measurements as a quantitative presymptomatic endophenotype, more closely related to disease risk than the clinical syndrome itself, to help evaluate putative genetic and non-genetic modifiers of AD risk. In this study, we examined the relationship between the presence or absence of the relatively protective GAB2 haplotype and PET measurements of regional-to-whole brain FDG uptake in several AD-affected brain regions in 158 cognitively normal late-middle-aged APOEε4 homozygotes, heterozygotes, and non-carriers. GAB2 haplotypes were characterized using Affymetrix Genome-Wide Human SNP 6.0 Array data from each of these subjects. As predicted, the possibly protective GAB2 haplotype was associated with higher regional-to-whole brain FDG uptake in AD-affected brain regions in APOEε4 carriers. While additional studies are needed, this study supports the association between the possibly protective GAB2 haplotype and the risk of late-onset AD in APOEε4 carriers. It also supports the use of brain-imaging endophenotypes to help assess possible modifiers of AD risk. PMID:20888920

Building science-based groundwater tools and capacity in Armenia for the Ararat Basin

USGS Publications Warehouse

Carter, Janet M.; Valder, Joshua F.; Anderson, Mark T.; Meyer, Patrick; Eimers, Jo L.

2016-05-18

The U.S. Geological Survey (USGS) and U.S. Agency for International Development (USAID) began a study in 2016 to help build science-based groundwater tools and capacity for the Ararat Basin in Armenia. The growth of aquaculture and other uses in the Ararat Basin has been accompanied by increased withdrawals of groundwater, which has resulted in a reduction of artesian conditions (decreased springflow, well discharges, and water levels) including loss of flowing wells in many places (Armenia Branch of Mendez England and Associates, 2014; Yu and others, 2015). This study is in partnership with USAID/Armenia in the implementation of its Science, Technology, Innovation, and Partnerships (STIP) effort through the Advanced Science and Partnerships for Integrated Resource Development (ASPIRED) program and associated partners, including the Government of Armenia, Armenia’s Hydrogeological Monitoring Center, and the USAID Global Development Lab and its GeoCenter. Scientific tools will be developed through this study that groundwater-resource managers, such as those in the Ministry of Nature Protection, in Armenia can use to understand and predict the consequences of their resource management decisions.

Activated STAT5 proteins induce activation of the PI 3-kinase/Akt and Ras/MAPK pathways via the Gab2 scaffolding adapter.

PubMed

Nyga, Rémy; Pecquet, Christian; Harir, Noria; Gu, Haihua; Dhennin-Duthille, Isabelle; Régnier, Aline; Gouilleux-Gruart, Valérie; Lassoued, Kaïss; Gouilleux, Fabrice

2005-08-15

The active forms of STAT5A (signal transducer and activator of transcription 5A) and STAT5B are able to relieve the cytokine dependence of haematopoietic cells and to induce leukaemia in mice. We have demonstrated previously that activation of the PI3K (phosphoinositide 3-kinase) signalling cascade plays a major role in cell growth and survival induced by these proteins. Interaction between STAT5 and p85, the regulatory subunit of the PI3K, has been suggested to be required for this activation. We show in the present study that the scaffolding protein Gab2 [Grb2 (growth-factor-receptor-bound protein 2)-associated binder-2] is an essential component of this interaction. Gab2 is persistently tyrosine-phosphorylated in Ba/F3 cells expressing caSTAT5 (constitutively activated STAT5), independent of JAK2 (Janus kinase 2) activation where it interacts with STAT5, p85 and Grb2, but not with Shp2 [SH2 (Src homology 2)-domain-containing tyrosine phosphatase] proteins. Interaction of STAT5 with Gab2 was also observed in Ba/F3 cells stimulated with interleukin-3 or expressing the oncogenic fusion protein Tel-JAK2. The MAPKs (mitogen-activated protein kinases) ERK1 (extracellular-signal-regulated kinase 1) and ERK2 were constitutively activated in the caSTAT5-expressing cells and were found to be required for caSTAT5-induced cell proliferation. Overexpression of Gab2-3YF, a mutant of Gab2 incapable of binding PI3K, inhibited the proliferation and survival of caSTAT5-expressing cells as well as ERK1/2 and Akt/protein kinase B phosphorylation. Taken together, our results indicate that Gab2 is required for caSTAT5-induced cell proliferation by regulating both the PI3K/Akt and the Ras/MAPK pathways.

Activated STAT5 proteins induce activation of the PI 3-kinase/Akt and Ras/MAPK pathways via the Gab2 scaffolding adapter

PubMed Central

2005-01-01

The active forms of STAT5A (signal transducer and activator of transcription 5A) and STAT5B are able to relieve the cytokine dependence of haematopoietic cells and to induce leukaemia in mice. We have demonstrated previously that activation of the PI3K (phosphoinositide 3-kinase) signalling cascade plays a major role in cell growth and survival induced by these proteins. Interaction between STAT5 and p85, the regulatory subunit of the PI3K, has been suggested to be required for this activation. We show in the present study that the scaffolding protein Gab2 [Grb2 (growth-factor-receptor-bound protein 2)-associated binder-2] is an essential component of this interaction. Gab2 is persistently tyrosine-phosphorylated in Ba/F3 cells expressing caSTAT5 (constitutively activated STAT5), independent of JAK2 (Janus kinase 2) activation where it interacts with STAT5, p85 and Grb2, but not with Shp2 [SH2 (Src homology 2)-domain-containing tyrosine phosphatase] proteins. Interaction of STAT5 with Gab2 was also observed in Ba/F3 cells stimulated with interleukin-3 or expressing the oncogenic fusion protein Tel–JAK2. The MAPKs (mitogen-activated protein kinases) ERK1 (extracellular-signal-regulated kinase 1) and ERK2 were constitutively activated in the caSTAT5-expressing cells and were found to be required for caSTAT5-induced cell proliferation. Overexpression of Gab2-3YF, a mutant of Gab2 incapable of binding PI3K, inhibited the proliferation and survival of caSTAT5-expressing cells as well as ERK1/2 and Akt/protein kinase B phosphorylation. Taken together, our results indicate that Gab2 is required for caSTAT5-induced cell proliferation by regulating both the PI3K/Akt and the Ras/MAPK pathways. PMID:15833084

Evidence for autophagic gridlock in aging and neurodegeneration.

PubMed

Bakhoum, Mathieu F; Bakhoum, Christine Y; Ding, Zhixia; Carlton, Susan M; Campbell, Gerald A; Jackson, George R

2014-07-01

Autophagy is essential to neuronal homeostasis, and its impairment is implicated in the development of neurodegenerative pathology. However, the underlying mechanisms and consequences of this phenomenon remain a matter of conjecture. We show that misexpression of human tau in Drosophila induces accumulation of autophagic intermediates with a preponderance of large vacuoles, which we term giant autophagic bodies (GABs), which are reminiscent of dysfunctional autophagic entities. Lowering basal autophagy reduces GABs, whereas increasing autophagy decreases mature autolysosomes. Induction of autophagy is also associated with rescue of the tauopathy phenotype, suggesting that formation of GABs may be a compensatory mechanism rather than a trigger of neurodegeneration. Last, we show that the peculiar Biondi bodies observed in the choroid epithelium of both elderly and Alzheimer's disease human brains express immunoreactive markers similar to those of GABs. Collectively, these data indicate that autophagic gridlock contributes to the development of pathology in aging and neurodegeneration. Published by Mosby, Inc.

The γ-Aminobutyrate Permease GabP Serves as the Third Proline Transporter of Bacillus subtilis

PubMed Central

Zaprasis, Adrienne; Hoffmann, Tamara; Stannek, Lorena; Gunka, Katrin; Commichau, Fabian M.

2014-01-01

PutP and OpuE serve as proline transporters when this imino acid is used by Bacillus subtilis as a nutrient or as an osmostress protectant, respectively. The simultaneous inactivation of the PutP and OpuE systems still allows the utilization of proline as a nutrient. This growth phenotype pointed to the presence of a third proline transport system in B. subtilis. We took advantage of the sensitivity of a putP opuE double mutant to the toxic proline analog 3,4-dehydro-dl-proline (DHP) to identify this additional proline uptake system. DHP-resistant mutants were selected and found to be defective in the use of proline as a nutrient. Whole-genome resequencing of one of these strains provided the lead that the inactivation of the γ-aminobutyrate (GABA) transporter GabP was responsible for these phenotypes. DNA sequencing of the gabP gene in 14 additionally analyzed DHP-resistant strains confirmed this finding. Consistently, each of the DHP-resistant mutants was defective not only in the use of proline as a nutrient but also in the use of GABA as a nitrogen source. The same phenotype resulted from the targeted deletion of the gabP gene in a putP opuE mutant strain. Hence, the GabP carrier not only serves as an uptake system for GABA but also functions as the third proline transporter of B. subtilis. Uptake studies with radiolabeled GABA and proline confirmed this conclusion and provided information on the kinetic parameters of the GabP carrier for both of these substrates. PMID:24142252

Atmospheric bulk deposition of dissolved nitrogen, phosphorus and silicate in the Gulf of Gabès (South Ionian Basin); implications for marine heterotrophic prokaryotes and ultraphytoplankton

NASA Astrophysics Data System (ADS)

Khammeri, Yosra; Hamza, Ismail Sabeur; Zouari, Amel Bellaaj; Hamza, Asma; Sahli, Emna; Akrout, Fourat; Ben Kacem, Mohamed Yassine; Messaoudi, Sabri; Hassen, Malika Bel

2018-05-01

Monthly variability of atmospheric deposition of dissolved nitrogen, phosphorus and silicate was assessed during the year period from June 2014 to May 2015 in the Gulf of Gabès, situated near the most active source of dust. Nutrient concentrations, ultraphytoplankton <10 μm and heterotrophic prokaryotes abundances were simultaneously investigated in the surface coastal water near the sampling site. Results showed that most of the bulk nutrient deposition (more than 66%) occurred during wet season, from October to February, characterized by air masses originating from the Tunisian desert. Dissolved Inorganic Nitrogen (DIN) deposition was very low, whereas Dissolved Inorganic Phosphorus (DIP) bulk deposition was within the range of that observed in the Eastern Mediterranean. High organic nitrogen (30.47%) and phosphorus (83,5%) content contributed to the bulk nitrogen and phosphorus deposition respectively. Months marked by high deposition were accompanied by an increase of carbon biomass from picophytoplankton, Synecococcus and heterotrophic prokaryotes while nanophytoplankton biomass decreased from 62.38% to 43.39% towards the wet season. During the wet season, heterotrophic prokaryotes become the first contributors to the carbon biomass in the surface water. This suggests a possible contribution of bacteria to the organic nutrient pool driven by atmospheric deposition or/and a reinforcement of the heterotrophic character of the system due to the organic content mineralization processes.

The diagnostic plot analysis of artesian aquifers with case studies in Table Mountain Group of South Africa

NASA Astrophysics Data System (ADS)

Sun, Xiaobin; Xu, Yongxin; Lin, Lixiang

2015-05-01

Parameter estimates of artesian aquifers where piezometric head is above ground level are largely made through free-flowing and recovery tests. The straight-line method proposed by Jacob-Lohman is often used for interpretation of flow rate measured at flowing artesian boreholes. However, the approach fails to interpret the free-flowing test data from two artesian boreholes in the fractured-rock aquifer in Table Mountain Group (TMG) of South Africa. The diagnostic plot method using the reciprocal rate derivative is adapted to evaluate the artesian aquifer properties. The variation of the derivative helps not only identify flow regimes and discern the boundary conditions, but also facilitates conceptualization of the aquifer system and selection of an appropriate model for data interpretation later on. Test data from two free-flowing tests conducted in different sites in TMG are analysed using the diagnostic plot method. Based on the results, conceptual models and appropriate approaches are developed to evaluate the aquifer properties. The advantages and limitations of using the diagnostic plot method on free-flowing test data are discussed.

Construction and calibration of a groundwater-flow model to assess groundwater availability in the uppermost principal aquifer systems of the Williston Basin, United States and Canada

USGS Publications Warehouse

Davis, Kyle W.; Long, Andrew J.

2018-05-31

The U.S. Geological Survey developed a groundwater-flow model for the uppermost principal aquifer systems in the Williston Basin in parts of Montana, North Dakota, and South Dakota in the United States and parts of Manitoba and Saskatchewan in Canada as part of a detailed assessment of the groundwater availability in the area. The assessment was done because of the potential for increased demands and stresses on groundwater associated with large-scale energy development in the area. As part of this assessment, a three-dimensional groundwater-flow model was developed as a tool that can be used to simulate how the groundwater-flow system responds to changes in hydrologic stresses at a regional scale.The three-dimensional groundwater-flow model was developed using the U.S. Geological Survey’s numerical finite-difference groundwater model with the Newton-Rhapson solver, MODFLOW–NWT, to represent the glacial, lower Tertiary, and Upper Cretaceous aquifer systems for steady-state (mean) hydrological conditions for 1981‒2005 and for transient (temporally varying) conditions using a combination of a steady-state period for pre-1960 and transient periods for 1961‒2005. The numerical model framework was constructed based on existing and interpreted hydrogeologic and geospatial data and consisted of eight layers. Two layers were used to represent the glacial aquifer system in the model; layer 1 represented the upper one-half and layer 2 represented the lower one-half of the glacial aquifer system. Three layers were used to represent the lower Tertiary aquifer system in the model; layer 3 represented the upper Fort Union aquifer, layer 4 represented the middle Fort Union hydrogeologic unit, and layer 5 represented the lower Fort Union aquifer. Three layers were used to represent the Upper Cretaceous aquifer system in the model; layer 6 represented the upper Hell Creek hydrogeologic unit, layer 7 represented the lower Hell Creek aquifer, and layer 8 represented the Fox Hills aquifer. The numerical model was constructed using a uniform grid with square cells that are about 1 mile (1,600 meters) on each side with a total of about 657,000 active cells.Model calibration was completed by linking Parameter ESTimation (PEST) software with MODFLOW–NWT. The PEST software uses statistical parameter estimation techniques to identify an optimum set of input parameters by adjusting individual model input parameters and assessing the differences, or residuals, between observed (measured or estimated) data and simulated values. Steady-state model calibration consisted of attempting to match mean simulated values to measured or estimated values of (1) hydraulic head, (2) hydraulic head differences between model layers, (3) stream infiltration, and (4) discharge to streams. Calibration of the transient model consisted of attempting to match simulated and measured temporally distributed values of hydraulic head changes, stream base flow, and groundwater discharge to artesian flowing wells. Hydraulic properties estimated through model calibration included hydraulic conductivity, vertical hydraulic conductivity, aquifer storage, and riverbed hydraulic conductivity in addition to groundwater recharge and well skin.The ability of the numerical model to accurately simulate groundwater flow in the Williston Basin was assessed primarily by its ability to match calibration targets for hydraulic head, stream base flow, and flowing well discharge. The steady-state model also was used to assess the simulated potentiometric surfaces in the upper Fort Union aquifer, the lower Fort Union aquifer, and the Fox Hills aquifer. Additionally, a previously estimated regional groundwater-flow budget was compared with the simulated steady-state groundwater-flow budget for the Williston Basin. The simulated potentiometric surfaces typically compared well with the estimated potentiometric surfaces based on measured hydraulic head data and indicated localized groundwater-flow gradients that were topographically controlled in outcrop areas and more generalized regional gradients where the aquifers were confined. The differences between the measured and simulated (residuals) hydraulic head values for 11,109 wells were assessed, which indicated that the steady-state model generally underestimated hydraulic head in the model area. This underestimation is indicated by a positive mean residual of 11.2 feet for all model layers. Layer 7, which represents the lower Hell Creek aquifer, is the only layer for which the steady-state model overestimated hydraulic head. Simulated groundwater-level changes for the transient model matched within plus or minus 2.5 feet of the measured values for more than 60 percent of all measurements and to within plus or minus 17.5 feet for 95 percent of all measurements; however, the transient model underestimated groundwater-level changes for all model layers. A comparison between simulated and estimated base flows for the steady-state and transient models indicated that both models overestimated base flow in streams and underestimated annual fluctuations in base flow.The estimated and simulated groundwater budgets indicate the model area received a substantial amount of recharge from precipitation and stream infiltration. The steady-state model indicated that reservoir seepage was a larger component of recharge in the Williston Basin than was previously estimated. Irrigation recharge and groundwater inflow from outside the Williston Basin accounted for a relatively small part of total groundwater recharge when compared with recharge from precipitation, stream infiltration, and reservoir seepage. Most of the estimated and simulated groundwater discharge in the Williston Basin was to streams and reservoirs. Simulated groundwater withdrawal, discharge to reservoirs, and groundwater outflow in the Williston Basin accounted for a smaller part of total groundwater discharge.The transient model was used to simulate discharge to 571 flowing artesian wells within the model area. Of the 571 established flowing artesian wells simulated by the model, 271 wells did not flow at any time during the simulation because hydraulic head was always below the land-surface altitude. As hydraulic head declined throughout the simulation, 68 of these wells responded by ceasing to flow by the end of 2005. Total mean simulated discharge for the 571 flowing artesian wells was 55.1 cubic feet per second (ft3/s), and the mean simulated flowing well discharge for individual wells was 0.118 ft3/s. Simulated discharge to individual flowing artesian wells increased from 0.039 to 0.177 ft3/s between 1961 and 1975 and decreased to 0.102 ft3/s by 2005. The mean residual for 34 flowing wells with measured discharge was 0.014 ft3/s, which indicates the transient model overestimated discharge to flowing artesian wells in the model area.Model limitations arise from aspects of the conceptual model and from simplifications inherent in the construction and calibration of a regional-scale numerical groundwater-flow model. Simplifying assumptions in defining hydraulic parameters in space and hydrologic stresses and time-varying observational data in time can limit the capabilities of this tool to simulate how the groundwater-flow system responds to changes in hydrologic stresses, particularly at the local scale; nevertheless, the steady-state model adequately simulated flow in the uppermost principal aquifer systems in the Williston Basin based on the comparison between the simulated and estimated groundwater-flow budget, the comparison between simulated and estimated potentiometric surfaces, and the results of the calibration process.

Stable-isotope geochemistry of groundwaters in the Delaware Basin of southeastern New Mexico

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lambert, S.J.; Harvey, D.M.

/sup 18/O//sup 16/O and D/H ratio measurements have been made on groundwaters sampled from the Rustler Formation (Ochoan, Permian) and related rocks in the northern Delaware Basin of southeastern New Mexico. Most confined Rustler waters at the Waste Isolation Pilot Plant (WIPP) site and to the west in Nash Draw and confined waters from the Capitan limestone constitute one population in deltaD/delta/sup 18/O space, while unconfined groundwaters inferred to originate as modern surface recharge to alluvium, sandstones in the Ogallala Formation, the near-surface Rustler in southwestern Nash Draw, and the Capitan vadose zone in the Guadalupe Mountains (Carlsbad Caverns) constitutemore » a distinctly different population; the two do not overlap. A likely explanation for this distinction is that meteoric recharge to most of the Rustler and Capitan took place in the geologic past under climatic conditions significantly different from the present. Available tritium and radiocarbon data are consistent with this hypothesis, and the apparent age of confined groundwaters is in excess of 12,000 radiocarbon years, suggesting that recharge took place under wetter conditions in the late Pleistocene. Processes governing recharge in the Delaware Basin are significantly different from those in the nearby Roswell Artesian Basin, but may be similar to those previously described for the Albuquerque (New Mexico) and Murray (South Australia) Basins. 133 refs.« less

Elemental Characteristics of Australian Sedimentary Opals and their Implications for Opal Formation and Gemstone Fingerprinting

NASA Astrophysics Data System (ADS)

Dutkiewicz, A.; Landgrebe, T. C.; Rey, P. F.

2011-12-01

Opal consists of amorphous SiO2.nH2O comprising a network of silica spheres, which in precious opal are of similar size and form an ordered network allowing light to diffract into an array of colors. Common opal, which is often associated with precious opal, lacks this play of color as it is composed of silica spheres of variable sizes. Australia supplies over 95% of the world's precious opal. The opal is almost exclusively located within Cretaceous sedimentary rocks of the Great Artesian Basin, which experienced a major phase of uplift in the Late Cretaceous with subsequent erosion removing a package of sedimentary rock up to 3 km in thickness. Intense weathering resulted in extensive silicification at relatively shallow levels within the Tertiary regolith. However, despite a billion dollar industry and a well-constrained geological history of the basin, the formation of sedimentary opal and its uniqueness to the Australian continent are still very poorly understood. In this study we have used laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) on precious and common opal from key opal mining areas in order to constrain the possible sources of silica fluids involved in opal genesis and to assess whether any major or trace elements could be used to determine the provenance of opal with respect to a particular mining area. A total of 123 spots, each comprising 59 elements, including rare earth elements were analyzed. Globally, volcanic and sedimentary opals can be distinguished on the basis of Ba and Ca concentrations. Although the opals from the Great Artesian Basin are all sedimentary, some show Ba concentrations consistent with volcanic opals suggesting that silica fluids from which they formed were derived from a volcanic province. The most likely source is the Cretaceous volcanic-plutonic province of central Queensland, which supplied vast amounts of volcanogenic material into the Great Artesian Basin. The weathering of feldspars from the volcaniclastic rocks would have provided ample silica-rich fluids for the formation of opal as well as kaolinite, which is abundant within the opal host rocks. Multivariate feature-selection analysis (using a signal-to-noise criterion) of elemental concentrations in opal bands from different locations indicates that the mining region from which the opals originate can best be discriminated using a combination of K, Se and Hf. The best independent provenance discriminators are K, Rb, Ba, Cs and Hf. Precious and common opal can be discriminated using a combination of Th, Hf and Cs with the best independent discriminators being Th, Bi and La. Overall, Th is the best element by which to discriminate between precious and common opals as these are characterized by relatively low and relatively high concentrations of Th, respectively. In general, major and trace element concentrations are significantly higher in common opals than in precious ones. Precious opal color is very difficult to discriminate based on elemental concentrations as it depends on the size and ordering of spheres. However, brown common opal can be distinguished from grey common opal based on concentrations of Pb, Ba and Fe. Opal fingerprinting is therefore possible using just a small number of elements.

Molecular dynamics simulation unveils the conformational flexibility of the interdomain linker in the bacterial transcriptional regulator GabR from Bacillus subtilis bound to pyridoxal 5’-phosphate

PubMed Central

Narzi, Daniele; Guidoni, Leonardo

2017-01-01

GabR from Bacillus subtilis is a transcriptional regulator belonging to the MocR subfamily of the GntR regulators. The structure of the MocR regulators is characterized by the presence of two domains: i) a N-terminal domain, about 60 residue long, possessing the winged-Helix-Turn-Helix (wHTH) architecture with DNA recognition and binding capability; ii) a C-terminal domain (about 350 residue) folded as the pyridoxal 5’-phosphate (PLP) dependent aspartate aminotransferase (AAT) with dimerization and effector binding functions. The two domains are linked to each other by a peptide bridge. Although structural and functional characterization of MocRs is proceeding at a fast pace, virtually nothing is know about the molecular changes induced by the effector binding and on how these modifications influence the properties of the regulator. An extensive molecular dynamics simulation on the crystallographic structure of the homodimeric B. subtilis GabR has been undertaken with the aim to envisage the role and the importance of conformational flexibility in the action of GabR. Molecular dynamics has been calculated for the apo (without PLP) and holo (with PLP bound) forms of the GabR. A comparison between the molecular dynamics trajectories calculated for the two GabR forms suggested that one of the wHTH domain detaches from the AAT-like domain in the GabR PLP-bound form. The most evident conformational change in the holo PLP-bound form is represented by the rotation and the subsequent detachment from the subunit surface of one of the wHTH domains. The movement is mediated by a rearrangement of the linker connecting the AAT domain possibly triggered by the presence of the negative charge of the PLP cofactor. This is the second most significant conformational modification. The C-terminal section of the linker docks into the “active site” pocket and establish stabilizing contacts consisting of hydrogen-bonds, salt-bridges and hydrophobic interactions. PMID:29253008

Guided Autobiography's Developmental Exchange: What's in It for Me?

ERIC Educational Resources Information Center

Thornton, James E.; Collins, John B.; Birren, James E.; Svensson, Cheryl

2011-01-01

The developmental exchange is a central feature of social development, interpersonal dynamics, situated learning, and personal transformation. It is the enabling process in Guided Autobiography (GAB) settings that promotes the achievement of personal goals and group accomplishments. Nevertheless, these exchanges are embedded in the GAB structures…

Development of design guidelines for proper selection of graded aggregate base in Maryland state highways : [research summary].

DOT National Transportation Integrated Search

2015-01-01

Millions of tons of graded aggregate base (GAB) materials are used in construction of : highway base layers in Maryland due to their satisfactory mechanical properties. The : fines content of a GAB material is highly variable and is often related to ...

Ground-water hydrology of the Hollister and San Juan Valleys, San Benito County, California, 1913-68

USGS Publications Warehouse

Kilburn, Chabot

1973-01-01

The Hollister and San Juan Valleys are within the Gilroy-Hollister ground-water basin. That part of the ground-water basin underlying the valleys consists of three subbasins each of which contains two or more ground-water subunits. The subbasin and subunit boundaries are formed by known or postulated faults, folded sedimentary rocks, and igneous rocks. The principal water-bearing units are lenticular beds of sand and gavel interbedded with clay, silt, sand, and gravel, or their locally consolidated equivalents, which range from Pliocene to Holocene, in age. Ground water occurs mainly under artesian or semiartesian conditions but also under unconfined (water-table) conditions in areas adjacent to most surface streams and, locally, under perched or semiperched conditions. In 1968 the depth to water in wells ranged from approximately 20 feet above land surface to more than 200 feet below land surface. Water-level differences in wells across the boundaries of adjacent subunits ranged from about 1 to more than 100 feet.

Water resources and data-network assessment of the Manasota Basin, Manatee and Sarasota Counties, Florida

USGS Publications Warehouse

Brown, David P.

1982-01-01

The average annual rainfall in the Manasota Basin is 53.7 inches , and annual evapotranspiration is about 39 inches. Annual runoff from gaged parts of the Basin ranges from about 13 to 17 inches per year. Streamflow in the upland areas diminishes rapidly following the end of the rainy season and approaches zero during extended dry periods. Generally, surface water is of good quality except in tidally affected, coastal areas. Its quality varies seasonally, generally becoming more mineralized during the dry season. The principal hydrogeologic units are the surficial aquifer, the upper confining beds and minor artesian aquifers, the Floridan acquifer, and the lower confining bed. The quality of ground water is generally good except in the western and southern parts where saltwater intrusion or incomplete flushing of residual seawater has occurred. Land-use changes and stream impoundments and diversions require reassessment of the type and use of data collected by the surface-water network. Such changes may require modification of existing sites and establishment of new ones. Development and completion of the monitoring plan could provide most of the data necessary to define the groundwater system. (USGS)

The Ogden Valley artesian reservoir

USGS Publications Warehouse

Thomas, H.E.

1945-01-01

Ogden Valley, in Weber County, Utah, contains an artesian reservoir from which the city of Ogden obtains all except a small part of its municipal water supply. A detailed investigation of the ground-water resources of Ogden Valley, and particularly of this artesian reservoir, was made by the Geological Survey, United States Department of the Interior, in cooperation with the city of Ogden between 1932 and 1934, and the results of this investigation have been reported by Leggette and Taylor.1 The present paper, which might be termed a sequel to that report, is based on data collected during those years, augmented by records that have been obtained (1935-1940) by the Geological Survey as part of a State-wide project in cooperation with the Utah State Engineer. The conclusions drawn from the study of these records and presented in detail in the following pages are as follows: (1) The artesian reservoir is filled to capacity nearly every year during the spring run-off from melting snow; (2) after the annual freshet, the recharge to the reservoir is insufficient to balance the discharge from artesian wells, which ordinarily is at a maximum during the summer; the reservoir is depleted and is not filled again until the following spring; (3) during the periods when the artesian reservoir is not full the rate of recharge is more or less proportional to the inflow to the valley by streams, except that rain on the recharge area may be of sufficient intensity to contribute some water by infiltration and deep penetration; and (4) the artesian reservoir thus serves to store water that would otherwise be lost to Great Salt Lake in the excess spring overflow, and available records indicate that water used by increased draft from wells would be replenished in normal years by increased recharge during the spring freshet.

Strontium isotope quantification of siderite, brine and acid mine drainage contributions to abandoned gas well discharges in the Appalachian Plateau

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chapman, Elizabeth C.; Capo, Rosemary C.; Stewart, Brian W.

2013-04-01

Unplugged abandoned oil and gas wells in the Appalachian region can serve as conduits for the movement of waters impacted by fossil fuel extraction. Strontium isotope and geochemical analysis indicate that artesian discharges of water with high total dissolved solids (TDS) from a series of gas wells in western Pennsylvania result from the infiltration of acidic, low Fe (Fe < 10 mg/L) coal mine drainage (AMD) into shallow, siderite (iron carbonate)-cemented sandstone aquifers. The acidity from the AMD promotes dissolution of the carbonate, and metal- and sulfate-contaminated waters rise to the surface through compromised abandoned gas well casings. Strontium isotopemore » mixing models suggest that neither upward migration of oil and gas brines from Devonian reservoirs associated with the wells nor dissolution of abundant nodular siderite present in the mine spoil through which recharge water percolates contribute significantly to the artesian gas well discharges. Natural Sr isotope composition can be a sensitive tool in the characterization of complex groundwater interactions and can be used to distinguish between inputs from deep and shallow contamination sources, as well as between groundwater and mineralogically similar but stratigraphically distinct rock units. This is of particular relevance to regions such as the Appalachian Basin, where a legacy of coal, oil and gas exploration is coupled with ongoing and future natural gas drilling into deep reservoirs.« less

Robust, non-invasive methods for metering groundwater well extraction in remote environments

NASA Astrophysics Data System (ADS)

Bulovic, Nevenka; Keir, Greg; McIntyre, Neil

2017-04-01

Quantifying the rate of extraction from groundwater wells can be essential for regional scale groundwater management and impact assessment. This is especially the case in regions heavily dependent on groundwater such as the semi-arid Surat and Bowen Basins in Queensland, Australia. Of the 30 000+ groundwater wells in this area, the majority of which are used for stock watering and domestic purposes, almost none have flow metering devices installed. As part of a research project to estimate regional groundwater extraction, we have undertaken a small scale flow metering program on a selected set of wells. Conventional in-line flow meters were unsuitable for our project, as both non-invasiveness and adaptability / suitability to a variety of discharge pipe characteristics was critical. We describe the use of two metering technologies not widely used in groundwater applications, non-invasive, clamp-on ultrasonic transit time flow meters and tipping bucket flow meters, as semi-permanent installations on discharge pipes of various artesian and sub-artesian groundwater wells. We present examples of detailed extraction rate time-series, which are of particular value in developing predictive models of water well extraction in data limited areas where water use dynamics and drivers are poorly understood. We conclude by discussing future project trajectories, which include expansion of the monitoring network through development of novel metering techniques and telemetry across large areas of poor connectivity.

Geohydrologic summary of the Pearl River basin, Mississippi and Louisiana

USGS Publications Warehouse

Lang, Joseph W.

1972-01-01

Fresh water in abundance is contained in large artesian reservoirs in sand and gravel deposits of Tertiary and Quaternary ages in the Pearl River basin, a watershed of 8,760 square miles. Shallow, water-table reservoirs occur in Quarternary deposits (Pleistocene and Holocene) that blanket most of the uplands in .the southern half of the basin and that are present in smaller upland areas and along streams elsewhere. The shallow reservoirs contribute substantially to dry-weather flow of the Strong River and Bogue Chitto and of Holiday, Lower Little, Silver, and Whitesand Creeks, among others. About 3 billion acre-feet of ground water is in storage in the fresh-water section, which extends from the surface to depths ranging from about sea level in the extreme northern part of the basin to more than 3,000 feet below sea level in the southern part of the basin. Variations in low flow for different parts of the river basin are closely related to geologic terrane and occurrence of ground water. The upland terrace belt that crosses the south-central part of the basin is underlain by permeable sand and gravel deposits and yields more than 0.20 cubic feet per second per square mile of drainage area to streamflow, whereas the northern part of the basin, underlain by clay, marl, and fine to medium sand, yields less than 0.05 cubic feet per second per square mile of drainage area (based on 7-day Q2 minimum flow computed from records). Overall, the potential surface-water supplies are large. Because water is available at shallow depths, most of the deeper aquifers have not been developed anywhere in the basin. At many places in the south, seven or more aquifers could be developed either by tapping one sand in each well or by screening two or more sands in a single well. Well fields each capable, of producing several million gallons of water a day are feasible nearly anywhere in the Pearl River basin. Water in nearly all the aquifers is of good to excellent quality and requires little or no treatment for most uses. The water is a soft, sodium bicarbonate type and therefore has a low to moderate dissolved-solids content. Mineral content increases generally downdip in an aquifer. Excessive iron, common in shallow aquifers, is objectionable for some water uses. Water from the streams, except in salty tidal reaches, is less mineralized than ground water; in 10 sites the median dissolved-solids content in streamflow was 50 milligrams per liter or less. Moderately intensive ground-water development has been made in the Bogalusa area, Louisiana; at the Mississippi Test Facility, Hancock County, Miss. ; and in the Jackson area, Mississippi. Wells with pumping rates of 500 to 1,000 gallons per minute each are common throughout the Pearl River basin, and some deep wells flow more than 3,000 gallons per minute in the coastal lowland areas. Probably 20 million gallons per day of artesian water flows uncontrolled from wells in the southern part of the basin. Ground-water levels, except in the higher altitudes, are within 60 feet of the surface, and flowing wells are common in the valleys and in the coastal Pine Meadows. Decline of water level is a problem in only a few small areas. Saline water as a resource is available for development from aquifers and streams near the coast and from aquifers at considerable depth in most of the Pearl River basin. Pollution is a problem in oil fields and in reaches of some streams below sewage and other waste-disposal points. The basin estuary contains water of variable quality but has potential for certain water-use developments that will require special planning and management.

Development of guidelines for proper selection of finer graded aggregate base for Georgia pavements - phase I.

DOT National Transportation Integrated Search

2014-09-01

In this study, the effects of No. 810 screening contents in GAB on pavement performance and GAB strength were investigated. One : Group I (013C) source and three Group II sources (028C, 048C, and 158C) were selected and specimens were prepared for Pr...

Sorption Isotherm Modelling Of Fermented Cassava Flour by Red Yeast Rice

NASA Astrophysics Data System (ADS)

Cahyanti, M. N.; Alfiah, M. N.; Hartini, S.

2018-04-01

The objective of the study is to determine the characteristic of moisture sorption isotherm from fermented cassava flour by red yeast rice using various modeling. This research used seven salt solutions and storage temperature of 298K, 303K, and 308K. The models used were Brunauer-Emmet-Teller (BET), Guggenheim-Anderson-de Boer (GAB) and Caurie model. The monolayer moisture content was around 4.51 – 5.99% db. Constant related to absorption heat in the multilayer area of [GAB model was around 0.86-0,91. Constant related to absorption heat in the monolayer area of GAB model was around 4.67-5.97. Constant related to absorption heat in the monolayer area of BET model was around 4.83-7.04. Caurie constant was around 1.25-1.59. The equilibrium and monolayer moisture content on fermented cassava flour by red yeast rice was decreasing as increasing temperature. GAB constant value indicated that the process of moisture absorption on the fermented cassava flour by red yeast rice categorized in type II.

Thermotalea metallivorans gen. nov., sp. nov., a thermophilic, anaerobic bacterium from the Great Artesian Basin of Australia aquifer.

PubMed

Ogg, Christopher D; Patel, Bharat K C

2009-05-01

A strictly anaerobic, thermophilic bacterium, designated strain B2-1(T), was isolated from microbial mats colonizing a runoff channel formed by free-flowing thermal water from a Great Artesian Basin, Australia, bore well (registered number 17263). The cells of strain B2-1(T) were slightly curved rods (3.0-3.5 x 0.6-0.7 microm) which stained Gram-negative. The strain grew optimally in tryptone-yeast extract-glucose medium at 50 degrees C (temperature growth range 30-55 degrees C) and a pH of 8 (pH growth range 6.5-9). Strain B2-1(T) grew poorly on yeast extract (0.2 %) and/or tryptone (0.2 %), which were obligately required for growth on other energy sources, including a range of other carbohydrates and organic acids, but not amino acids. The end-products of glucose fermentation were ethanol and acetate. In the presence of 0.2 % yeast extract, iron(III), manganese(IV) and elemental sulfur were reduced but sulfate, thiosulfate, sulfite, nitrate and nitrite were not reduced. Growth was inhibited by chloramphenicol, streptomycin, tetracycline, penicillin, ampicillin, sodium azide and by NaCl concentrations greater than 4 % (w/v). The DNA G+C content was 48+/-1 mol% as determined by the thermal denaturation method. 16S rRNA gene sequence analysis indicated that strain B2-1(T) was a member of the family Clostridiaceae, class Clostridia, phylum Firmicutes and was most closely related to Geosporobacter subterraneus DSM 17957(T) (89.9 % similarity). On the basis of 16S rRNA gene sequence comparisons and physiological characteristics, strain B2-1(T) is considered to represent a novel species of a new genus, for which the name Thermotalea metallivorans gen. nov., sp. nov. is proposed. The type strain is B2-1(T) (=KCTC 5625(T)=JCM 15105(T)=DSM 21119(T)).

Modeling the probability distribution of peak discharge for infiltrating hillslopes

NASA Astrophysics Data System (ADS)

Baiamonte, Giorgio; Singh, Vijay P.

2017-07-01

Hillslope response plays a fundamental role in the prediction of peak discharge at the basin outlet. The peak discharge for the critical duration of rainfall and its probability distribution are needed for designing urban infrastructure facilities. This study derives the probability distribution, denoted as GABS model, by coupling three models: (1) the Green-Ampt model for computing infiltration, (2) the kinematic wave model for computing discharge hydrograph from the hillslope, and (3) the intensity-duration-frequency (IDF) model for computing design rainfall intensity. The Hortonian mechanism for runoff generation is employed for computing the surface runoff hydrograph. Since the antecedent soil moisture condition (ASMC) significantly affects the rate of infiltration, its effect on the probability distribution of peak discharge is investigated. Application to a watershed in Sicily, Italy, shows that with the increase of probability, the expected effect of ASMC to increase the maximum discharge diminishes. Only for low values of probability, the critical duration of rainfall is influenced by ASMC, whereas its effect on the peak discharge seems to be less for any probability. For a set of parameters, the derived probability distribution of peak discharge seems to be fitted by the gamma distribution well. Finally, an application to a small watershed, with the aim to test the possibility to arrange in advance the rational runoff coefficient tables to be used for the rational method, and a comparison between peak discharges obtained by the GABS model with those measured in an experimental flume for a loamy-sand soil were carried out.

A disease module in the interactome explains disease heterogeneity, drug response and captures novel pathways and genes in asthma

PubMed Central

Sharma, Amitabh; Menche, Jörg; Huang, C. Chris; Ort, Tatiana; Zhou, Xiaobo; Kitsak, Maksim; Sahni, Nidhi; Thibault, Derek; Voung, Linh; Guo, Feng; Ghiassian, Susan Dina; Gulbahce, Natali; Baribaud, Frédéric; Tocker, Joel; Dobrin, Radu; Barnathan, Elliot; Liu, Hao; Panettieri, Reynold A.; Tantisira, Kelan G.; Qiu, Weiliang; Raby, Benjamin A.; Silverman, Edwin K.; Vidal, Marc; Weiss, Scott T.; Barabási, Albert-László

2015-01-01

Recent advances in genetics have spurred rapid progress towards the systematic identification of genes involved in complex diseases. Still, the detailed understanding of the molecular and physiological mechanisms through which these genes affect disease phenotypes remains a major challenge. Here, we identify the asthma disease module, i.e. the local neighborhood of the interactome whose perturbation is associated with asthma, and validate it for functional and pathophysiological relevance, using both computational and experimental approaches. We find that the asthma disease module is enriched with modest GWAS P-values against the background of random variation, and with differentially expressed genes from normal and asthmatic fibroblast cells treated with an asthma-specific drug. The asthma module also contains immune response mechanisms that are shared with other immune-related disease modules. Further, using diverse omics (genomics, gene-expression, drug response) data, we identify the GAB1 signaling pathway as an important novel modulator in asthma. The wiring diagram of the uncovered asthma module suggests a relatively close link between GAB1 and glucocorticoids (GCs), which we experimentally validate, observing an increase in the level of GAB1 after GC treatment in BEAS-2B bronchial epithelial cells. The siRNA knockdown of GAB1 in the BEAS-2B cell line resulted in a decrease in the NFkB level, suggesting a novel regulatory path of the pro-inflammatory factor NFkB by GAB1 in asthma. PMID:25586491

Dielectric Studies on Binary Mixtures of Diethyl Ether (DEE) in Polar Solvents

NASA Astrophysics Data System (ADS)

Pradhan, S. K.; Dash, S. K.; Swain, M. D.; Swain, B. B.

2011-11-01

Dielectric constant (ɛ) of diethylether (DEE) in binary mixtures with four polar solvents such as n-butanl, i-butanol, t-butanol and tolune has been measured at 455 kHz and at a temperature 303.15 K. The refractive indices were measured at a regulated temperature by Pulfrich refractometer at sodium D-line. The data is used to evaluate mutual correlation factor gab, excess molar polarization and excess free energy of mixing ΔGab by using Winkelmann-Quitzsch equation for binary mixtures to asses the suitability of the polar solvents as modifiers. The trend of variation for these parameters exhibit marked dependence on the nature of alcohols. Diethylether is one of the solvent extractant used for the extraction and separation of zirconium and hafnium in reactor technology. The extractant is blended with appropriate polar modifiers for greater dispersal and more rapid phase disengagement. This facilitates in the elimination of the third organo-aqueous phase containing some of the metal ions. As such the study of molecular interaction among the component molecules has been undertaken in these binary mixtures using the dielectric route. The interaction parameters such as mutual correlation factor gab is found to be less than one in all alcohols, while it is negative in toluene upto 0.7 DEE molefraction and thereafter becoming positive. The nature of variation of the excess miolar polarization ΔP and excess free energy of mixing Gab tends to support the assessment of gab to choose a suitable polar modifier.

Co-clustering of Fcgamma and B cell receptors induces dephosphorylation of the Grb2-associated binder 1 docking protein.

PubMed

Koncz, G; Tóth, G K; Bökönyi, G; Kéri, G; Pecht, I; Medgyesi, D; Gergely, J; Sármay, G

2001-07-01

The immunoreceptor tyrosine-based inhibitory motif (ITIM) of human type IIb Fcgamma receptor (FcgammaRIIb) is phosphorylated on its tyrosine upon co-clustering with the B cell receptor (BCR). The phosphorylated ITIM (p-ITIM) binds to the SH2 domains of polyphosphoinositol 5-phosphatase (SHIP) and the tyrosine phosphatase, SHP-2. We investigated the involvement of the molecular complex composed of the phosphorylated SHIP and FcgammaRIIb in the activation of SHP-2. As a model compound, we synthesized a bisphosphopeptide, combining the sequences of p-ITIM and the N-terminal tyrosine phosphorylated motif of SHIP with a flexible spacer. This compound bound to the recombinant SH2 domains of SHP-2 with high affinity and activated the phosphatase in an in vitro assay. These data suggest that the phosphorylated FcgammaRII-SHIP complexes formed in the intact cells may also activate SHP-2. Grb2-associated binder 1 (Gab1) is a multisite docking protein, which becomes tyrosine-phosphorylated in response to various types of signaling, including BCR. In turn it binds to the SH2 domains of SHP-2, SHIP and the p85 subunit of phosphatidyl inositol 3-kinase (PtdIns3-K) and may regulate their activity. Gab1 is a potential substrate of SHP-2, thus its binding to FcgammaRIIb may modify the Gab1-bound signaling complex. We show here that Gab1 is part of the multiprotein complex assembled by FcgammaRIIb upon its co-clustering with BCR. Gab1 may recruit SH2 domain-containing molecules to the phosphorylated FcgammaRIIb. SHP-2, activated upon the binding to FcgammaRIIb-SHIP complex, partially dephosphorylates Gab1, resulting in the release of PtdIns3-K and ultimately in the inhibition of downstream activation pathways in BCR/FcgammaRIIb co-aggregated cells.

BCR mediated signal transduction in immature and mature B cells.

PubMed

Koncz, Gábor; Bodor, Csaba; Kövesdi, Dorottya; Gáti, Róbert; Sármay, Gabriella

2002-06-03

Ligation of B cell receptors (BCR) on immature B cells may induce apoptosis, while in mature B cells it stimulates cell activation and growth. The signaling pathway regulating the differential functional response, death or survival of the B cell is not fully characterized. We have tested the intracellular signaling requirement of these processes using B cells isolated from the spleen of irradiated auto-reconstituted (transitional immature B cells) and untreated mice (mature B cells), respectively. We compared the BCR induced intracellular [Ca2+] transient, protein tyrosine phosphorylation and ERK phosphorylation, furthermore, the activation of Elk-1 and CREB transcription factors. The BCR induced rise of intracellular [Ca2+] did not significantly differ in the two populations, only a slight difference in the late phase of the response was observed. Immature B cells responded with a maximum tyrosine phosphorylation to a five times lower dose of anti-IgM compared to the mature population. Most importantly, we have found a significant difference in the tyrosine phosphorylation of the Gab family adaptor proteins, Gab1/2. In contrast to mature B cells, crosslinking of BCR on immature B cells did not induce tyrosine phosphorylation of Gab2, thus the Gab2-organized signal amplification complex could not be produced. Furthermore, we detected a significant difference in the kinetics of BCR induced ERK, Elk-1 and CREB phosphorylation. In immature B cells, ERK was transiently phosphorylated, ceasing after 120 min, while in mature cells, ERK phosphorylation was sustained. Elk-1 and CREB activation was also transient in immature B cells, followed the kinetics of ERK phosphorylation. The lack of sustained Erk1/2 activation suppresses the transcription factors necessary for the proliferation signal. Since ERK is regulated by the phosphorylated Gab1/2, these data demonstrate that BCR triggered phosphorylation and signal amplification of Gab1/2 is a critical step in a life or death decision of B cells.

Artesian water in Somervell County, Texas

USGS Publications Warehouse

Fiedler, Albert George

1934-01-01

Somervell County is part of the Grand Prairie region of north-central Texas. An excellent supply of artesian water is available from the Trinity reservoir at no great depth. The first flowing well in Somervell County was drilled in 1880, and the first flowing well in Glen Rose, the county seat, was drilled in 1881. Since 1880 more than 500 wells have been constructed, probably more than half of them prior to 1900. Many of these early wells have been abandoned, either because the well hole caved in as a result of the absence or deterioration of casing or because the wells ceased to yield water by natural flow. The artesian water has always been used chiefly for domestic supply and for watering stock. Only a comparatively small area of farm land is now irrigated. The quantity used to supply the needs of tourist camps and outdoor swimming pools forms a relatively large percentage of the total amount withdrawn from the artesian reservoir in Somervell County. The artesian water is contained chiefly in the permeable sandstone beds--the basal sands for the Trinity group. Some shallow wells of small capacity are supplied by water in the crevices and solution channels in limestone that apparently is near the base of the Glen Rose formation and probably derives its water by leakage from the underlying Trinity reservoir. The wells encounter from one to three aquifers, the number depending upon their depth and location. At and around Glen Rose, the area in which most of the flowing wells are concentrated, the first aquifer is the creviced portion of the limestone, which is encountered at about 50 feet but does not everywhere yield water. The second and third aquifers, both of which are part of the 'basal sands' of the Trinity group, are much more uniform and persistent; the second is encountered at Glen Rose at depths of 100 to 135 feet, and the third at depths of about 275 to 330 feet. The artesian reservoir is supplied by water that falls as rain or snow upon the outcrop of the 'basal sands' on the higher lands west and north of Somervell County. These permeable beds dip eastward and southeastward beneath the county and are covered by the less permeable beds of the overlying Glen Rose formation. As the water that reaches the zone of saturation percolates down the dip of the beds it is confined under artesian pressure, and wells that penetrate these beds at lower altitudes yield water by natural flow. Originally the artesian pressure was sufficient to raise the water in tightly cased wells in the northwestern part of Somervell County to a maximum altitude of about 750 feet above sea level, but at Glen Rose the original artesian head was probably not more than 710 feet. From the information avail- able it would appear that the original head of the water in the upper aquifers was not nearly as great as that of the lower aquifer. The head has declined generally throughout the county. At Glen Rose in June 1930 the artesian head of the water from the deepest aquifer of the Trinity reservoir was about 639 feet above sea level, and the head of the water from the upper aquifers was about 15 feet less. The decline in head still continues, but at a very much slower rate than formerly. With the decline in head the size of the area of artesian flow has decreased, though in recent years the shrinkage has been comparatively little. The draft from the artesian reservoir in Somervell County during the summer is estimated at about 1,000,000 gallons a day, distributed as follows: Domestic use, 150,000 gallons; stock use, 60,000 gallons; recreation pools, 250,000 gallons; irrigation, 180,000 gallons; and waste, not including underground leakage, 360,000 gallons. In winter the daily draft is probably about 370,000 gallons less than in summer. The 360,000 gallons a day permitted to flow from wells without being used for any beneficial purposes is an unnecessary drain upon the artesian reservoir. The head of many of the flowing wells in Glen R

Mapping the hydraulic connection between a coalbed and adjacent aquifer: example of the coal-seam gas resource area, north Galilee Basin, Australia

NASA Astrophysics Data System (ADS)

Jiang, Zhenjiao; Mariethoz, Gregoire; Schrank, Christoph; Cox, Malcolm; Timms, Wendy

2016-12-01

Coal-seam gas production requires groundwater extraction from coal-bearing formations to reduce the hydraulic pressure and improve gas recovery. In layered sedimentary basins, the coalbeds are often separated from freshwater aquifers by low-permeability aquitards. However, hydraulic connection between the coalbed and aquifers is possible due to the heterogeneity in the aquitard such as the existence of conductive faults or sandy channel deposits. For coal-seam gas extraction operations, it is desirable to identify areas in a basin where the probability of hydraulic connection between the coalbed and aquifers is low in order to avoid unnecessary loss of groundwater from aquifers and gas production problems. A connection indicator, the groundwater age indictor (GAI), is proposed, to quantify the degree of hydraulic connection. The spatial distribution of GAI can indicate the optimum positions for gas/water extraction in the coalbed. Depressurizing the coalbed at locations with a low GAI would result in little or no interaction with the aquifer when compared to the other positions. The concept of GAI is validated on synthetic cases and is then applied to the north Galilee Basin, Australia, to assess the degree of hydraulic connection between the Aramac Coal Measure and the water-bearing formations in the Great Artesian Basin, which are separated by an aquitard, the Betts Creek Beds. It is found that the GAI is higher in the western part of the basin, indicating a higher risk to depressurization of the coalbed in this region due to the strong hydraulic connection between the coalbed and the overlying aquifer.

Endocrine disruptors in water filters used in the Rio dos Sinos Basin region, Southern Brazil.

PubMed

Furtado, C M; von Mühlen, C

2015-05-01

The activated carbon filter is used in residences as another step in the treatment of drinking water, based on a physical-chemical process to absorb pollutants that are not removed in conventional treatment. Endocrine disruptors (EDCs) are exogenous substances or mixtures of substances that acts on the endocrine system similarly to the endogenously produced hormones, triggering malfunctions and harmful changes to human and animal health. The objective of the present work was to study EDCs through semi-quantitative analysis of residential water filters collected in the region of Rio dos Sinos basin, focusing on two specific classes: hormones and phenols. The solid phase extraction principle was used for the extraction of compounds and gas chromatography coupled with mass spectrometry for the separation and characterization of EDCs. Four samples of residential filters collected from public water distribution and artesian wells, from the cities of Novo Hamburgo and São Leopoldo were analysed. Using the developed methodology, it was possible to detect and comparatively quantify selected EDCs in all studied samples, which indicates the presence of these contaminants in drinking water from different sources.

Role of artesian groundwater in forming Martian permafrost features

NASA Technical Reports Server (NTRS)

Howard, Alan D.

1991-01-01

Various landforms possibly related to formation (growth), movement, or decay of ground ice have been identified on Mars, including fretted terrain (ft) and associated lobate debris aprons (lda), the chaotic terrain, concentric crater fills (ccf), polygonal ground, softened terrain, small domes that are possibly pingos, and curvilinear (fingerprint) features (cuf). Glaciers may also have been present. Some of these may involve ice derived from artesian groundwater. Topical areas of discussion are: Mars groundwater and the location of permafrost features; the ft, lda, ccf, and cuf; role of artesian groundwater in formation of fretted terrain, lobate debris blankets, and concentric crater fills; sources of glacial ice; and pingos and other pseudovolcanic structures.

Blockade of epidermal growth factor- or heregulin-dependent ErbB2 activation with the anti-ErbB2 monoclonal antibody 2C4 has divergent downstream signaling and growth effects.

PubMed

Jackson, James G; St Clair, Patricia; Sliwkowski, Mark X; Brattain, Michael G

2004-04-01

Due to heterodimerization and a variety of stimulating ligands, the ErbB receptor system is both diverse and flexible, which proves particularly advantageous to the aberrant signaling of cancer cells. However, specific mechanisms of how a particular receptor contributes to generating the flexibility that leads to aberrant growth regulation have not been well described. We compared the utilization of ErbB2 in response to epidermal growth factor (EGF) and heregulin stimulation in colon carcinoma cells. Anti-ErbB2 monoclonal antibody 2C4 blocked heregulin-stimulated phosphorylation of ErbB2 and ErbB3; activation of mitogen-activated protein kinase (MAPK), phosphatidylinositol 3'-kinase (PI3K), and Akt; proliferation; and anchorage-independent growth. 2C4 blocked EGF-mediated phosphorylation of ErbB2 and inhibited PI3K/Akt and anchorage-independent growth but did not affect ErbB1 or MAPK. Immunoprecipitations showed that ErbB3 and Grb2-associated binder (Gab) 1 were phosphorylated and associated with PI3K activity after heregulin treatment and that Gab1 and Gab2, but not ErbB3, were phosphorylated and associated with PI3K activity after EGF treatment. These data show that monoclonal antibody 2C4 inhibited all aspects of heregulin signaling as well as anchorage-independent and monolayer growth. Furthermore, we identify ErbB2 as a critical component of EGF signaling to the Gab1/Gab2-PI3K-Akt pathway and anchorage-independent growth, but EGF stimulation of MAPK and monolayer growth can occur efficiently without the contribution of ErbB2.

GAB2 Amplification in Squamous Cell Lung Cancer of Non-Smokers

PubMed Central

2017-01-01

Lung squamous cell cancer (SCC) is typically found in smokers and has a very low incidence in non-smokers, indicating differences in the tumor biology of lung SCC in smokers and non-smokers. However, the specific mutations that drive tumor growth in non-smokers have not been identified. To identify mutations in lung SCC of non-smokers, we performed a genetic analysis using arrays comparative genomic hybridization (ArrayCGH). We analyzed 19 patients with lung SCC who underwent surgical treatment between April 2005 and April 2015. Clinical characteristics were reviewed, and DNA was extracted from fresh frozen lung cancer specimens. All of copy number alterations from ArrayCGH were validated using The Cancer Genome Atlas (TCGA) copy number variation (CNV) data of lung SCC. We examined the frequency of copy number changes according to the smoking status (non-smoker [n = 8] or smoker [n = 11]). We identified 16 significantly altered regions from ArrayCGH data, three gain and four loss regions overlapped with the TCGA lung squamous cell carcinoma (LUSC) patients. Within these overlapped significant regions, we detected 15 genes that have been reported in the Cancer Gene census. We also found that the proto-oncogene GAB2 (11q14.1) was significantly amplified in non-smokers patients and vice versa in both ArrayCGH and TCGA data. Immunohistochemical analyses showed that GAB2 protein was relatively upregulated in non-smoker than smoker tissues (37.5% vs. 9.0%, P = 0.007). GAB2 amplification may have an important role in the development of lung SCC in non-smokers. GAB2 may represent a potential biomarker for lung SCC in non-smokers. PMID:28960030

GAB2 Amplification in Squamous Cell Lung Cancer of Non-Smokers.

PubMed

Park, Yu Rang; Bae, Soo Hyeon; Ji, Wonjun; Seo, Eul Ju; Lee, Jae Cheol; Kim, Hyeong Ryul; Jang, Se Jin; Choi, Chang Min

2017-11-01

Lung squamous cell cancer (SCC) is typically found in smokers and has a very low incidence in non-smokers, indicating differences in the tumor biology of lung SCC in smokers and non-smokers. However, the specific mutations that drive tumor growth in non-smokers have not been identified. To identify mutations in lung SCC of non-smokers, we performed a genetic analysis using arrays comparative genomic hybridization (ArrayCGH). We analyzed 19 patients with lung SCC who underwent surgical treatment between April 2005 and April 2015. Clinical characteristics were reviewed, and DNA was extracted from fresh frozen lung cancer specimens. All of copy number alterations from ArrayCGH were validated using The Cancer Genome Atlas (TCGA) copy number variation (CNV) data of lung SCC. We examined the frequency of copy number changes according to the smoking status (non-smoker [n = 8] or smoker [n = 11]). We identified 16 significantly altered regions from ArrayCGH data, three gain and four loss regions overlapped with the TCGA lung squamous cell carcinoma (LUSC) patients. Within these overlapped significant regions, we detected 15 genes that have been reported in the Cancer Gene census. We also found that the proto-oncogene GAB2 (11q14.1) was significantly amplified in non-smokers patients and vice versa in both ArrayCGH and TCGA data. Immunohistochemical analyses showed that GAB2 protein was relatively upregulated in non-smoker than smoker tissues (37.5% vs. 9.0%, P = 0.007). GAB2 amplification may have an important role in the development of lung SCC in non-smokers. GAB2 may represent a potential biomarker for lung SCC in non-smokers. © 2017 The Korean Academy of Medical Sciences.

MicroRNA-409-3p suppresses colorectal cancer invasion and metastasis partly by targeting GAB1 expression.

PubMed

Bai, Rongpan; Weng, Chunhua; Dong, Haojie; Li, Siqi; Chen, Guangdi; Xu, Zhengping

2015-11-15

Colorectal cancer (CRC) is one of the most common cancers worldwide and its metastasis accounts for the majority of deaths. However, the molecular mechanisms underlying CRC progression are not well characterized. In this study, we identified miR-409-3p as a tumor suppressor of CRC. MiR-409-3p expression was significantly downregulated in CRC tissue compared to adjacent non-tumor tissue, and reduced miR-409-3p expression was correlated with CRC metastasis. In vitro and in vivo studies revealed that miR-409-3p negatively regulated CRC metastatic capacities, including suppressing cancer cell migration, invasion and metastasis. To explore the mechanism of action of miR-409-3p, we adopted a pathway and pathophysiological event-based target screening and validation approach, and found nine known metastasis-related genes as potential targets. The 3'-UTR binding assays between the candidates and miR-409-3p suggested that only GAB1, NR4A2 and LMO4 were directly regulated by the miRNA. However, endogenous expression analysis revealed that only GAB1 was modulated by miR-409-3p in CRC cells at both the mRNA and protein levels. Furthermore, we provided evidence to conclude that GAB1 was partially responsible for miR-409-3p-mediated metastasis. Taken together, our data demonstrate that miR-409-3p is a metastatic suppressor, and post-transcriptional inhibition of the oncoprotein GAB1 is one of the mechanisms of action of this miRNA. Our finding suggests miR-409-3p might be a novel target for CRC metastasis treatment. © 2015 UICC.

A Transgenic Drosophila Model Demonstrates That the Helicobacter pylori CagA Protein Functions as a Eukaryotic Gab Adaptor

PubMed Central

Botham, Crystal M.; Wandler, Anica M.; Guillemin, Karen

2008-01-01

Infection with the human gastric pathogen Helicobacter pylori is associated with a spectrum of diseases including gastritis, peptic ulcers, gastric adenocarcinoma, and gastric mucosa–associated lymphoid tissue lymphoma. The cytotoxin-associated gene A (CagA) protein of H. pylori, which is translocated into host cells via a type IV secretion system, is a major risk factor for disease development. Experiments in gastric tissue culture cells have shown that once translocated, CagA activates the phosphatase SHP-2, which is a component of receptor tyrosine kinase (RTK) pathways whose over-activation is associated with cancer formation. Based on CagA's ability to activate SHP-2, it has been proposed that CagA functions as a prokaryotic mimic of the eukaryotic Grb2-associated binder (Gab) adaptor protein, which normally activates SHP-2. We have developed a transgenic Drosophila model to test this hypothesis by investigating whether CagA can function in a well-characterized Gab-dependent process: the specification of photoreceptors cells in the Drosophila eye. We demonstrate that CagA expression is sufficient to rescue photoreceptor development in the absence of the Drosophila Gab homologue, Daughter of Sevenless (DOS). Furthermore, CagA's ability to promote photoreceptor development requires the SHP-2 phosphatase Corkscrew (CSW). These results provide the first demonstration that CagA functions as a Gab protein within the tissue of an organism and provide insight into CagA's oncogenic potential. Since many translocated bacterial proteins target highly conserved eukaryotic cellular processes, such as the RTK signaling pathway, the transgenic Drosophila model should be of general use for testing the in vivo function of bacterial effector proteins and for identifying the host genes through which they function. PMID:18483552

Using Moeller PLC in automation of an artesian fountains

NASA Astrophysics Data System (ADS)

Barz, C.; Latinovic, T.; Deaconu, S.; Preradović, D.; Pop, P. P.; Pop-Vadean, A.

2017-01-01

The paper presents the use of a Moeller PLC in the automation of an artesian fountains from Baia Mare. The application is developed in Ladder Diagram and contains two modes of operation. The first mode is the Automatic Mode in which are defines certain operating times of the artesian fountains pumps. These set times make recurrence of the operation. The second mode is the Manual Mode in which each pump is operated independently. Manual mode is only active for service personal, according to the user accounts and authorization rights of its. All orders are made with a touch screen Weintek in menus that are created for application. Using the Service Menu can visualize defects occurred during the regime of operation, which is recorded.

Study of the Met Tyrosine Kinase in the Pathogenesis of Breast Cancer.

DTIC Science & Technology

1998-10-01

cDNA clones appeared to encode for open reading frames, however, and neither clone showed any homology to the protein Gab1 , which is a signal...domain, and tissue characterization using specific antibodies , will hopefully determine whether these clones represent important c-met targets. In...Behrens J, Birchmeier W. Interaction between Gab1 and the c-met receptor tyrosine kinase is responsible for epithelial morphogenesis. Nature 1996;384:173

Exposure of resident sparrows to West Nile virus evidenced in South Tunisia.

PubMed

Hammouda, A; Lecollinet, S; Hamza, F; Nasri, I; Neb, A; Selmi, S

2015-12-01

During the last few years, several cases of West Nile virus (WNV) infection in humans have been reported in Tunisia. However, detailed information on WNV infection in wild birds, the primary amplifying host of WNV, are lacking. In this work, we investigated the exposure of wild sparrows (hybrid Passer domesticus × hispaniolensis) living in two oases in southern Tunisia (Gabès and Kébili oases) to WNV, through the detection of WNV-specific antibodies by using ELISA and microneutralization tests. In total, 208 birds were sampled (54 from Kébili, 154 from Gabès). Anti-WNV antibodies were detected in two birds, corresponding to an overall seroprevalence of 1%. There was no significant difference between the two sampled populations [1·85% (1/54) in Kébili, 0·65% (1/154) in Gabès]. These data provide indirect evidence of the exposure of resident sparrows in southern Tunisia to WNV.

Deep artesian aquifers of Sanibel and Captiva Islands, Lee County, Florida

USGS Publications Warehouse

Boggess, D.H.; O'Donnell, T. H.

1982-01-01

The principal sources of water on Sanibel and Captiva Islands, Lee County, Florida, are two deep artesian aquifers within the upper and lower parts of the Hawthorn Formation. Both aquifers are under artesian pressure and wells flow at the land surface. Water from the upper aquifer is of better quality than that from the lower aquifer and can be used in some areas without desalination. Dissolved solids concentrations in the upper aquifer average 1,540 milligrams per liter. Water levels in wells in the upper aquifer range from 8 to 15 feet above sea level; most wells flow as much as 15 gallons per minute at land surface. The lower aquifer is the source of the public supply for the islands. Dissolved solids concentrations in the lower aquifer range from 1,700 to 4,130 milligrams per liter and average 2,571 milligrams per liter. From July to November 1977, water levels in the aquifer ranged from 7 to 32 feet above sea level throughout Sanibel-Captiva Islands. In 1977 the average pumpage from public supply wells was 1.4 million gallons per day. Pumpage from the artesian aquifers during 1977 was about 690 million gallons. The water is desalinated before distribution. (USGS)

Salt-water encroachment, geology, and ground-water resources of Savannah area, Georgia and South Carolina

USGS Publications Warehouse

Counts, H.B.; Donsky, Ellis

1964-01-01

The Savannah area consists of about 2,300 square miles of the Coastal Plain along the coast of eastern Georgia and southeastern South Carolina. Savannah is near the center of the area. Most of the large ground-water developments are in or near Savannah. About 98 percent of the approximately 60 mgd of ground water used is pumped from the principal artesian aquifer, which is composed of about 600 feet of limestone of middle Eocene, Oligocene, and early Miocene ages. Industrial and other wells of large diameter yield as much as 4,200 gpm from the principal artesian aquifer. Pumping tests and flow-net analyses show that the coefficient of transmissibility averages about 200,000 gpd per ft in the immediate Savannah area. The specific capacity of wells in the principal artesian aquifer generally is about 50 gpm per ft of drawdown. The coefficient of storage of the principal artesian aquifer is about 0.0003 in the Savannah area. Underlying the Savannah area are a series of unconsolidated and semiconsolidated sediments ranging in age from Late Cretaceous to Recent. The Upper Cretaceous, Paleocene, and lower Eocene sediments supply readily available and usable water in other parts of the Coastal Plain, but although the character and physical properties of these formations are similar in the Savannah area to the same properties in other areas, the hydraulic and structural conditions appear to be different. Deep test wells are needed to evaluate the ground-water potential of these rocks. The lower part of the sediments of middle Eocene age acts as a confining layer to the vertical movement of water into or out of the principal artesian aquifer. Depending on the location and depth, the principal artesian aquifer consists of from one to five geologic units. The lower boundary of the aquifer is determined by a reduction in permeability and an increase in salt-water content. Although the entire limestone section is considered water bearing, most of the ground water used in the area comes from the upper part of the Ocala limestone of late Eocene age and the limestones of Oligocene age. The greatest volume of water comes from the upper part of the Ocala limestone, but the greatest number of wells are supplied from the rocks of Oligocene age. The Tampa limestone and Hawthorn formation of early Miocene age are generally water bearing; the amount and quality of the water depends on the location. The water from some wells in the Tampa and most of the water from the Hawthorn is high in hydrogen sulfide. In the northeastern part of the area the principal artesian aquifer is close to the land surface. Here the confining layer is thin and in some of the estauaries it may be completely cut through by the scouring action of the streams during tidal fluctuations. In this part of the area artesian groundwater at one time discharged from the aquifer as submarine springs. Now a reverse effect may be occurring; ocean and river water may be entering the aquifer. The silts, clays, and very fine sands of the upper Miocene and Pliocene ( ?) series generally have low permeabilities and form the upper confining layer for the principal artesian aquifer. Although all the sediments overlying the principal artesian aquifer are considered to be part of the confining layer, locally some of the upper units are water bearing. The uppermost geologic units in the Savannah area are sediments of Pliocene ( ?) to Recent age and consist of sands, silts, and clays with shell and gravel beds which are a source of water for shallow wells. The first large ground-water supply from the principal artesian aquifer was developed in 1886 by the city of Savannah. Additional municipal and industrial supplies have been developed since that time. Pumpage progressively increased to a peak of 62 mgd in 1957. Outside of the city and industrial area the 1957 pumpage was about 9 mgd. In 1958 the total pumpage in the Savannah area was about 68 mgd or about 3 mgd less th

Role of Crk Adaptor Proteins in Cellular Migration and Invasion in Human Breast Cancer

DTIC Science & Technology

2007-03-01

nucleus. To confirm the staining is indeed specific, another antibody specific for CrkII is being tested. Furthermore, cytoplasmic and nuclear...the endogenous CrkL binding partner, Gab1 , which is enhanced upon HGF stimulation (Appendix 16). One final experiment, showing that the CrkLV5 tag...receptor tyrosine kinases, and a docking protein Gab1 , involved in epithelial dispersal and morphogenesis (5, 11, 12). The NH2-terminal SH3 domain of

Moisture sorption isotherms and thermodynamic properties of mexican mennonite-style cheese.

PubMed

Martinez-Monteagudo, Sergio I; Salais-Fierro, Fabiola

2014-10-01

Moisture adsorption isotherms of fresh and ripened Mexican Mennonite-style cheese were investigated using the static gravimetric method at 4, 8, and 12 °C in a water activity range (aw) of 0.08-0.96. These isotherms were modeled using GAB, BET, Oswin and Halsey equations through weighed non-linear regression. All isotherms were sigmoid in shape, showing a type II BET isotherm, and the data were best described by GAB model. GAB model coefficients revealed that water adsorption by cheese matrix is a multilayer process characterized by molecules that are strongly bound in the monolayer and molecules that are slightly structured in a multilayer. Using the GAB model, it was possible to estimate thermodynamic functions (net isosteric heat, differential entropy, integral enthalpy and entropy, and enthalpy-entropy compensation) as function of moisture content. For both samples, the isosteric heat and differential entropy decreased with moisture content in exponential fashion. The integral enthalpy gradually decreased with increasing moisture content after reached a maximum value, while the integral entropy decreased with increasing moisture content after reached a minimum value. A linear compensation was found between integral enthalpy and entropy suggesting enthalpy controlled adsorption. Determination of moisture content and aw relationship yields to important information of controlling the ripening, drying and storage operations as well as understanding of the water state within a cheese matrix.

Evidence of separate subgroups of juvenile southern bluefin tuna.

PubMed

Chambers, Mark S; Sidhu, Leesa A; O'Neill, Ben; Sibanda, Nokuthaba

2017-11-01

Archival tagging studies of southern bluefin tuna (SBT , Thunnus maccoyii ) have revealed that juveniles residing in the Great Australian Bight (GAB) over the austral summer undertake seasonal cyclic migrations to the southeast Indian Ocean and the Tasman Sea during winter. However, there remains disagreement about the extent of mixing between juvenile SBT regularly caught by longline fleets south of Africa and those observed in the GAB. Some researchers have argued that archival tag recoveries indicate most juveniles reside in the GAB over the austral summer. Others have suggested that recoveries of conventional and archival tags are better explained by a juvenile population consisting of separate groups on the eastern and western sides of the Indian Ocean with limited intermixing. We present analyses of catch and tag recovery data and re-examine archival tagging studies. The evidence provided strongly favors the hypothesis of separate juvenile subgroups, or contingents, with limited intermixing. We draw some tentative conclusions about the nature of the putative contingents and discuss some implications of these findings for the interpretation of existing datasets and future research priorities. We also provide the first evidence that the migration choices of juveniles that summer in the GAB are influenced by fidelity to winter feeding grounds and suggest this helps explain the collapse of the surface fishery off New South Wales in the 1980s.

Epidermal growth factor–stimulated Akt phosphorylation requires clathrin or ErbB2 but not receptor endocytosis

PubMed Central

Garay, Camilo; Judge, Gurjeet; Lucarelli, Stefanie; Bautista, Stephen; Pandey, Rohan; Singh, Tanveer; Antonescu, Costin N.

2015-01-01

Epidermal growth factor (EGF) binding to its receptor (EGFR) activates several signaling intermediates, including Akt, leading to control of cell survival and metabolism. Concomitantly, ligand-bound EGFR is incorporated into clathrin-coated pits—membrane structures containing clathrin and other proteins—eventually leading to receptor internalization. Whether clathrin might regulate EGFR signaling at the plasma membrane before vesicle scission is poorly understood. We compared the effect of clathrin perturbation (preventing formation of, or receptor recruitment to, clathrin structures) to that of dynamin2 (allowing formation of clathrin structures but preventing EGFR internalization) under conditions in which EGFR endocytosis is clathrin dependent. Clathrin perturbation by siRNA gene silencing, with the clathrin inhibitor pitstop2, or knocksideways silencing inhibited EGF-simulated Gab1 and Akt phosphorylation in ARPE-19 cells. In contrast, perturbation of dynamin2 with inhibitors or by siRNA gene silencing did not affect EGF-stimulated Gab1 or Akt phosphorylation. EGF stimulation enriched Gab1 and phospho-Gab1 within clathrin structures. ARPE-19 cells have low ErbB2 expression, and overexpression and knockdown experiments revealed that robust ErbB2 expression bypassed the requirement for clathrin for EGF-stimulated Akt phosphorylation. Thus clathrin scaffolds may represent unique plasma membrane signaling microdomains required for signaling by certain receptors, a function that can be separated from vesicle formation. PMID:26246598

Hydrologic properties and ground-water flow systems of the Paleozoic rocks in the upper Colorado River basin in Arizona, Colorado, New Mexico, Utah, and Wyoming, excluding the San Juan Basin

USGS Publications Warehouse

Geldon, Arthur L.

2003-01-01

The hydrologic properties and ground-water flow systems of Paleozoic sedimentary rocks in the Upper Colorado River Basin were investigated under the Regional Aquifer-System Analysis (RASA) program of the U.S. Geological Survey in anticipation of the development of water supplies from bedrock aquifers to fulfill the region's growing water demands. The study area, in parts of Arizona, Colorado, New Mexico, Utah, and Wyoming, covers about 100,000 square miles. It includes parts of four physiographic provinces--the Middle Rocky Mountains, Wyoming Basin, Southern Rocky Mountains, and Colorado Plateaus. A variety of landforms, including mountains, plateaus, mesas, cuestas, plains, badlands, and canyons, are present. Altitudes range from 3,100 to 14,500 feet. Precipitation is distributed orographically and ranges from less than 6 inches per year at lower altitudes to more than 60 inches per year in some mountainous areas. Most of the infrequent precipitation at altitudes of less than 6,000 feet is consumed by evapotranspiration. The Colorado and Green Rivers are the principal streams: the 1964-82 average discharge of the Colorado River where it leaves the Upper Colorado River Basin is 12,170 cubic feet per second (a decrease of 5,680 cubic feet per second since construction of Glen Canyon Dam in 1963). On the basis of their predominant lithologic and hydrologic properties, the Paleozoic rocks are classified into four aquifers and three confining units. The Flathead aquifer, Gros Ventre confining unit, Bighorn aquifer, Elbert-Parting confining unit, and Madison aquifer (Redwall-Leadville and Darwin-Humbug zones) make up the Four Corners aquifer system. A thick sequence, composed mostly of Mississippian and Pennsylvanian shale, anhydrite, halite, and carbonate rocks--the Four Corners confining unit (Belden-Molas and Paradox-Eagle Valley subunits)--overlies the Four Corners aquifer system in most areas and inhibits vertical ground-water flow between the Four Corners aquifer system and the overlying Canyonlands aquifer. Composed of the uppermost Paleozoic rocks, the Canyonlands aquifer consists, in ascending order, of the Cutler-Maroon, Weber-De Chelly, and Park City-State Bridge zones. The Paleozoic rocks are underlain by a basal confining unit consisting of Precambrian sedimentary, igneous, and metamorphic rocks and overlain throughout most of the Upper Colorado River Basin by the Chinle-Moenkopi confining unit, which consists of Triassic formations composed mostly of shale. The largest values of porosity, permeability, hydraulic conductivity, transmissivity, and artesian yield are exhibited by the Redwall-Leadville zone of the Madison aquifer and the Weber-De Chelly zone of the Canyonlands aquifer. The former consists almost entirely of Devonian and Mississippian carbonate rocks: the latter consists mostly of Pennsylvanian and Permian quartz sandstone. Unit-averaged porosity in hydrogeologic units composed of Paleozoic rocks ranges from less than 1 to 28 percent. Permeability ranges from less than 0.0001 to 3,460 millidarcies. Unit-averaged hydraulic conductivity ranges from 0.000005 to 200 feet per day. The composite transmissivity of Paleozoic rocks ranges from 0.0005 to 47,000 feet squared per day. Artesian yields to wells and springs (excluding atypical springflows) from these hydrogeologic units range from less than 1 to 10,000 gallons per minute. The permeability and watersupply capabilities of all hydrogeologic units progressively decrease from uplifted areas to structural basins. Recharge to the Paleozoic rocks is provided by direct infiltration of precipitation, leakage from streams, and ground-water inflows from structurally continuous areas west and north of the Upper Colorado River Basin. The total recharge available flom ground-water systems in the basin from direct precipitation and stream leakage is estimated to be 6,600,000 acre-feet per year. However, little of this recharge directly enters the Paleozoic rocks

Ground-water conditions and geologic reconnaissance of the Upper Sevier River basin, Utah

USGS Publications Warehouse

Carpenter, Carl H.; Robinson, Gerald B.; Bjorklund, Louis Jay

1967-01-01

The upper Sevier River basin is in south-central Utah and includes an area of about 2,400 .square miles of high plateaus and valleys. It comprises the entire Sevier River drainage basin above Kingston, including the East Fork Sevier River and its tributaries. The basin was investigated to determine general ground-water conditions, the interrelation of ground water and surface water, the effects of increasing the pumping of ground water, and the amount of ground water in storage.The basin includes four main valleys - Panguitch Valley, Circle Valley, East Fork Valley, and Grass Valley - which are drained by the Sevier River, the East Fork Sevier River, and Otter Creek. The plateaus surrounding the valleys consist of sedimentary and igneous rocks that range in age from Triassic to Quaternary. The valley fill, which is predominantly alluvial gravel, sand, silt, and clay, has a maximum thickness of more than 800 feet.The four main valleys constitute separate ground-water basins. East Fork Valley basin is divided into Emery Valley, Johns Valley, and Antimony subbasins, and Grass Valley basin is divided into Koosharem and Angle subbasins. Ground water occurs under both artesian and water-table conditions in all the basins and subbasins except Johns Valley, Emery Valley, and Angle subbasins, where water is only under water-table conditions. The water is under artesian pressure in beds of gravel and sand confined by overlying beds of silt and clay in the downstream parts of Panguitch Valley basin, Circle Valley basin, and Antimony subbasin, and in most of Koosharem subbasin. Along the sides and upstream ends of these basins, water is usually under water-table conditions.About 1 million acre-feet of ground water that is readily available to wells is stored in the gravel and sand of the upper 200 feet of saturated valley fill. About 570,000 acre-feet is stored in Panguitch Valley basin, about 210,000 in Circle Valley basin, about 6,000 in Emery Valley subbasin, about 90,000 in Johns Valley subbasin, about 36,000 in Antimony subbasin, about 90,000 in Koosharem subbasin, and about 60,000 in Angle subbasin. Additional water, although it is not readily available to wells, is stored in beds of silt and clay. Some ground water also is available in the bedrock underlying and surrounding the basins, although the bedrock formations generally are poor aquifers.The principal source of recharge to the valley fill in the upper Sevier River basin is infiltration from streams, canals, and irrigated fields. Some ground water also miles into the valley till from the bedrock surrounding the basins.The basin contains about 300 wells, most of which are less than 4 inches in diameter, are less than 250 feet deep, and are used for domestic purposes and stock watering. More than half the wells are flowing wells in Koosharem subbasin.Approximately 82,000 acre-feet of ground water was discharged in 1962 from the valley till. Springs discharged about 33,000 acre-feet, wells about 3,000, and drains about 3,000; and evapotranspiration from phreatophyte areas about 43,000 acre-feet. Springs in bedrock discharged an additional 75,000 acre-feet. Most of the water discharged by springs, wells, and drains was used for irrigation.The ground water in the basin generally is of good chemical quality. The water is excellent for irrigation and stock but is not as desirable for most domestic and industrial uses because of its hardness. The dissolved-solids content of the ground water generally increases slightly from the upstream end of the individual ground-water basins to. the downstream end owing mostly to repeated use of the water for irrigation. Surface water and ground water in the upper Sevier River basin are inter- connected, and the base flows of streams are affected by changes in ground- water levels. Increased pumping of ground water would result in (1) an increase in the recharge to the aquifers from surface-water sources or (2) a decrease in the discharge from streams, springs, flowing wells, and areas of phreatophytes or (3) a combination of these.About 43,000 acre-feet of ground water is now discharged annually by evapotranspiration from phreatophyte areas, and perhaps one-third of this loss, or about 14,000 acre-feet, could be salvaged by eliminating wet areas and phreatophytes. The areas where water could be salvaged are at the downstream ends of Panguitch Valley basin, Circle Valley basin, and Antimony subbasin. Most of the 14,000 acre-feet 'of water could be pumped from large-diameter wells or developed by properly designed drains without greatly affecting stream- flow and with only moderate effect on 'spring discharge. If the wells were properly located, the pumping would lower water levels and dry up wet areas where phreatophytes grow. Conjunctive use of ground water and surface water would facilitate the more efficient use of all water resources in the basin

On Anholonomic Deformation, Geometry, and Differentiation

DTIC Science & Technology

2013-02-01

αβχ are not necessarily Levi - Civita connection coefficients). The vector cross product × obeys, for two vectors V and W and two covectors α and β , V...three-dimensional space. 2.2.5. Euclidean space. Let GAB(X ) = GA · GB be the metric tensor of the space. The Levi - Civita connection coefficients of GAB...curvature tensor of the Levi - Civita connection vanishes identically: G R A BCD = 2 ( ∂[B G A C]D + G A[B|E|G EC]D ) = 0. (43) In n

Role of Crk Adaptor Proteins in Cellular Migration and Invasion in Human Breast Cancer

DTIC Science & Technology

2008-03-01

interact with the endogenous CrkL binding partner, Gab1 , which is enhanced upon HGF stimulation. The over- expression of CrkL and Gab1 leads to Rac...transgenic line in both virgin and lactating mice (Figure 1C). Moreover, although the antibody recognizes endogenous protein, it is clearly evident that...found equal levels in both the nucleus and cytoplasm using two different antibodies targeting CrkI/II or specifically CrkII (7). Furthermore, we have

WATER FROM DIFFERENT SOURCES USED FOR THE IRRIGATION OF VEGETABLES TO BE MARKETED: RESEARCH ON Cryptosporidium spp., Giardia spp., AND COLIFORMS IN PARANA, BRAZIL.

PubMed

Tiyo, Rogerio; de Souza, Carla Zangari; Nishi, Letícia; Brustolin, Camila Fernanda; Ratti, Bianca Altrão; Falavigna Guilherme, Ana Lucia

2015-01-01

The aim of this work was to compare, from a parasitological ( Cryptosporidium spp. and Giardia duodenalis), bacteriological (total and thermotolerants coliforms) and physicochemical perspective, water sources used for drinking and irrigation of vegetables intended to be sold for human consumption. From January 2010 to May 2011, samples of different water sources from vegetable producing properties were collected; 100 liters for parasitological analysis, 200 mL for bacteriological analysis, and five liters for physicochemical analysis. Water samples were filtered under vacuum with a kit containing a cellulose acetate membrane filter, 1.2 µm (Millipore(r), Barueri, SP, Brazil). The material retained on the membrane was mechanically extracted and analyzed by direct immunofluorescence (Merifluor(r)kit). From 20 rural properties investigated, 10 had artesian wells (40 samples), 10 had common wells (40 samples), and one had a mine (four samples), the latter contaminated by Cryptosporidium spp. In samples from artesian wells, 90 to 130 meters depth, 42.5% were positive for total coliforms and 5.0% were identified to have abnormal coloration. From the samples of common wells, 14 to 37 meters depth, 87.5% were contaminated with total coliforms, 82.5% were positive for thermotolerant coliforms, and 12.5% had color abnormalities. We did not detect the presence of Giardia spp. or Cryptosporidium spp. in artesian and common wells. The use of artesian or common wells is an important step in the control of the spreading of zoonoses, particularly Cryptosporidium spp. and Giardia spp., as well as artesian wells for coliform control in local production of vegetables to be marketed.

WATER FROM DIFFERENT SOURCES USED FOR THE IRRIGATION OF VEGETABLES TO BE MARKETED: RESEARCH ON Cryptosporidium spp., Giardia spp., AND COLIFORMS IN PARANA, BRAZIL

PubMed Central

TIYO, Rogerio; de SOUZA, Carla Zangari; NISHI, Letícia; BRUSTOLIN, Camila Fernanda; RATTI, Bianca Altrão; FALAVIGNA GUILHERME, Ana Lucia

2015-01-01

SUMMARY The aim of this work was to compare, from a parasitological ( Cryptosporidiumspp. and Giardia duodenalis), bacteriological (total and thermotolerants coliforms) and physicochemical perspective, water sources used for drinking and irrigation of vegetables intended to be sold for human consumption. From January 2010 to May 2011, samples of different water sources from vegetable producing properties were collected; 100 liters for parasitological analysis, 200 mL for bacteriological analysis, and five liters for physicochemical analysis. Water samples were filtered under vacuum with a kit containing a cellulose acetate membrane filter, 1.2 µm (Millipore(r), Barueri, SP, Brazil). The material retained on the membrane was mechanically extracted and analyzed by direct immunofluorescence (Merifluor(r)kit). From 20 rural properties investigated, 10 had artesian wells (40 samples), 10 had common wells (40 samples), and one had a mine (four samples), the latter contaminated by Cryptosporidiumspp. In samples from artesian wells, 90 to 130 meters depth, 42.5% were positive for total coliforms and 5.0% were identified to have abnormal coloration. From the samples of common wells, 14 to 37 meters depth, 87.5% were contaminated with total coliforms, 82.5% were positive for thermotolerant coliforms, and 12.5% had color abnormalities. We did not detect the presence of Giardiaspp. or Cryptosporidiumspp. in artesian and common wells. The use of artesian or common wells is an important step in the control of the spreading of zoonoses, particularly Cryptosporidiumspp. and Giardiaspp., as well as artesian wells for coliform control in local production of vegetables to be marketed. PMID:26422158

Deep reaching fluid flow in the North East German Basin: origin and processes of groundwater salinisation

NASA Astrophysics Data System (ADS)

Tesmer, M.; Möller, P.; Wieland, S.; Jahnke, C.; Voigt, H.; Pekdeger, A.

2007-11-01

Major element chemistry, rare-earth element distribution, and H and O isotopes are conjointly used to study the sources of salinisation and interaquifer flow of saline groundwater in the North East German Basin. Chemical analyses from hydrocarbon exploration campaigns showed evidence of the existence of two different groups of brines: halite and halite Ca-Cl brines. Residual brines and leachates are identified by Br-/Cl- ratios. Most of the brines are dissolution brines of Permian evaporites. New analyses show that the pattern of rare-earth elements and yttrium (REY) are closely linked to H and O isotope distribution. Thermal brines from deep wells and artesian wells indicate isotopically evaporated brines, which chemically interacted with their aquifer environment. Isotopes and rare-earth element patterns prove that cross flow exists, especially in the post-Rupelian aquifer. However, even at depths exceeding 2,000 m, interaquifer flow takes place. The rare-earth element pattern and H and O isotopes identify locally ascending brines. A large-scale lateral groundwater flow has to be assumed because all pre-Rupelian aquifer systems to a depth of at least 500 m are isotopically characterised by Recent or Pleistocene recharge conditions.

Desorption isotherms and isosteric heat of desorption of previously frozen raw pork meat.

PubMed

Clemente, G; Bon, J; Benedito, J; Mulet, A

2009-08-01

Some meat products involve drying previously frozen pork meat, which makes the knowledge of sorption characteristics very important for the design and management of meat dehydration processes. The sorption isotherms of raw pork meat from the Biceps femoris and Semimembranosus muscles were determined at four temperatures: 25, 30, 35 and 40°C. The experimental results were modelled using the GAB (Guggenheim, Anderson and De Boer) model. The effect of temperature was also taken into account to model the experimental sorption isotherms using four models (GAB, Oswin, Halsey and Henderson). The best results were provided by the GAB model. From the experimental sorption isotherms the isosteric heats of sorption were determined. For a moisture content higher than 0.15kgwater/kgdm, the isosteric heat of meat was similar to the latent heat of vaporization for pure water. For a lower moisture content, an increase in the isosteric heat was observed when the moisture content decreased.

Inhibition of Shp2 suppresses mutant EGFR-induced lung tumors in transgenic mouse model of lung adenocarcinoma

PubMed Central

Schneeberger, Valentina E.; Ren, Yuan; Luetteke, Noreen; Huang, Qingling; Chen, Liwei; Lawrence, Harshani R.; Lawrence, Nicholas J.; Haura, Eric B.; Koomen, John M.; Coppola, Domenico; Wu, Jie

2015-01-01

Epidermal growth factor receptor (EGFR) mutants drive lung tumorigenesis and are targeted for therapy. However, resistance to EGFR inhibitors has been observed, in which the mutant EGFR remains active. Thus, it is important to uncover mediators of EGFR mutant-driven lung tumors to develop new treatment strategies. The protein tyrosine phosphatase (PTP) Shp2 mediates EGF signaling. Nevertheless, it is unclear if Shp2 is activated by oncogenic EGFR mutants in lung carcinoma or if inhibiting the Shp2 PTP activity can suppress EGFR mutant-induced lung adenocarcinoma. Here, we generated transgenic mice containing a doxycycline (Dox)-inducible PTP-defective Shp2 mutant (tetO-Shp2CSDA). Using the rat Clara cell secretory protein (CCSP)-rtTA-directed transgene expression in the type II lung pneumocytes of transgenic mice, we found that the Gab1-Shp2 pathway was activated by EGFRL858R in the lungs of transgenic mice. Consistently, the Gab1-Shp2 pathway was activated in human lung adenocarcinoma cells containing mutant EGFR. Importantly, Shp2CSDA inhibited EGFRL858R-induced lung adenocarcinoma in transgenic animals. Analysis of lung tissues showed that Shp2CSDA suppressed Gab1 tyrosine phosphorylation and Gab1-Shp2 association, suggesting that Shp2 modulates a positive feedback loop to regulate its own activity. These results show that inhibition of the Shp2 PTP activity impairs mutant EGFR signaling and suppresses EGFRL858R-driven lung adenocarcinoma. PMID:25730908

Integrated geodetic monitoring of subsidence due to groundwater abstraction in the Perth Basin, Western Australia

NASA Astrophysics Data System (ADS)

Parker, A. L.; Filmer, M. S.; Featherstone, W. E.; Pigois, J. P.; Lyon, T.

2016-12-01

Small-magnitude subsidence due to groundwater abstraction was first observed in Perth, Western Australia, in the 2000s. Ongoing monitoring of ground deformation is required to avoid infrastructure damage, increased risk of seawater inundation and compromised integrity of geodetic benchmarks (e.g. tide-gauges). Subsidence measurements will also be used to provide constraints on aquifer storage properties, which is of significance to groundwater-resource management and proposed managed aquifer recharge. To these ends, a geodetic monitoring system in the Perth Basin has been established incorporating repeat levelling, continuous GPS and >20 years of InSAR data, including four years of TerraSAR-X (2012 to 2016), plus the first Sentinel-1A interferograms over Western Australia. The magnitude of subsidence ( 2-5 mm/yr) is at the limit detectable with InSAR, but through integration with high-precision repeat levelling, groundwater level records and geological information, we are able to constrain and interpret the spatial and temporal characteristics of the deformation field. InSAR datasets reveal a narrow subsiding coastal strip proximal to abstraction bores that came online since the early 2000s. Subsidence is also identified at the eastern margin of the Perth Basin, where seasonal variations of 10 mm measured with repeat-levelling are attributed to expansion and contraction of shallow clays. Elsewhere in the basin, high-resolution time-series from TerraSAR-X record non-linear, often seasonal vertical land motion, which correlates with changes in water levels at artesian monitoring bores. SAR coverage of the Perth Basin is ongoing and is now complemented by corner reflectors co-located with continuous GPS to tie measurements to a consistent reference frame. The ongoing collection of these and other geodetic data ensures that we are well placed to measure and monitor vertical land motion across the Perth Basin, including any effects of proposed managed aquifer recharge.

Temperature inverted haloclines provide winter warm-water refugia for manatees in southwest Florida

USGS Publications Warehouse

Stith, Bradley M.; Reid, James P.; Langtimm, Catherine A.; Swain, Eric D.; Doyle, Terry J.; Slone, Daniel H.; Decker, Jeremy D.; Soderqvist, Lars E.

2010-01-01

Florida manatees (Trichechus manatus latirostris) overwintering in the Ten Thousand Islands and western Everglades have no access to power plants or major artesian springs that provide warm-water refugia in other parts of Florida. Instead, hundreds of manatees aggregate at artificial canals, basins, and natural deep water sites that act as passive thermal refugia (PTR). Monitoring at two canal sites revealed temperature inverted haloclines, which provided warm salty bottom layers that generally remained above temperatures considered adverse for manatees. At the largest PTR, the warmer bottom layer disappeared unless significant salt stratification was maintained by upstream freshwater inflow over a persistent tidal wedge. A detailed three-dimensional hydrology model showed that salinity stratification inhibited vertical convection induced by atmospheric cooling. Management or creation of temperature inverted haloclines may be a feasible and desirable option for resource managers to provide passive thermal refugia for manatees and other temperature sensitive aquatic species.

Wavelet analysis of lunar semidiurnal tidal influence on selected inland rivers across the globe.

PubMed

Briciu, Andrei-Emil

2014-02-26

The lunar semidiurnal influence is already known for tidal rivers. The moon also influences inland rivers at a monthly scale through precipitation. We show that, for some non-tidal rivers, with special geological conditions, the lunar semidiurnal tidal oscillation can be detected. The moon has semidiurnal tidal influence on groundwater, which will then export it to streamflow. Long time series with high frequency measurements were analysed by using standard wavelet analysis techniques. The lunar semidiurnal signal explains the daily double-peaked river level evolution of inland gauges. It is stronger where springs with high discharge occur, especially in the area of Edwards-Trinity and Great Artesian Basin aquifers and in areas with dolomite/limestone strata. The average maximum semidiurnal peaks range between 0.002 and 0.1 m. This secondary effect of the earth tides has important implications in predicting high resolution hydrographs, in the water cycle of wetlands and in water management.

miR-150 influences B-cell receptor signaling in chronic lymphocytic leukemia by regulating expression of GAB1 and FOXP1

PubMed Central

Mraz, Marek; Chen, Liguang; Rassenti, Laura Z.; Ghia, Emanuela M.; Li, Hongying; Jepsen, Kristen; Smith, Erin N.; Messer, Karen; Frazer, Kelly A.; Kipps, Thomas J.

2014-01-01

We examined the microRNAs (miRNAs) expressed in chronic lymphocytic leukemia (CLL) and identified miR-150 as the most abundant, but with leukemia cell expression levels that varied among patients. CLL cells that expressed ζ-chain–associated protein of 70 kDa (ZAP-70) or that used unmutated immunoglobulin heavy chain variable (IGHV) genes, each had a median expression level of miR-150 that was significantly lower than that of ZAP-70–negative CLL cells or those that used mutated IGHV genes. In samples stratified for expression of miR-150, CLL cells with low-level miR-150 expressed relatively higher levels of forkhead box P1 (FOXP1) and GRB2-associated binding protein 1 (GAB1), genes with 3′ untranslated regions having evolutionary-conserved binding sites for miR-150. High-level expression of miR-150 could repress expression of these genes, which encode proteins that enhance B-cell receptor signaling, a putative CLL-growth/survival signal. Also, high-level expression of miR-150 was a significant independent predictor of longer treatment-free survival or overall survival, whereas an inverse association was observed for high-level expression of GAB1 or FOXP1 for overall survival. This study demonstrates that expression of miR-150 can influence the relative expression of GAB1 and FOXP1 and the signaling potential of the B-cell receptor, thereby possibly accounting for the noted association of expression of miR-150 and disease outcome. PMID:24787006

miR-150 influences B-cell receptor signaling in chronic lymphocytic leukemia by regulating expression of GAB1 and FOXP1.

PubMed

Mraz, Marek; Chen, Liguang; Rassenti, Laura Z; Ghia, Emanuela M; Li, Hongying; Jepsen, Kristen; Smith, Erin N; Messer, Karen; Frazer, Kelly A; Kipps, Thomas J

2014-07-03

We examined the microRNAs (miRNAs) expressed in chronic lymphocytic leukemia (CLL) and identified miR-150 as the most abundant, but with leukemia cell expression levels that varied among patients. CLL cells that expressed ζ-chain-associated protein of 70 kDa (ZAP-70) or that used unmutated immunoglobulin heavy chain variable (IGHV) genes, each had a median expression level of miR-150 that was significantly lower than that of ZAP-70-negative CLL cells or those that used mutated IGHV genes. In samples stratified for expression of miR-150, CLL cells with low-level miR-150 expressed relatively higher levels of forkhead box P1 (FOXP1) and GRB2-associated binding protein 1 (GAB1), genes with 3' untranslated regions having evolutionary-conserved binding sites for miR-150. High-level expression of miR-150 could repress expression of these genes, which encode proteins that enhance B-cell receptor signaling, a putative CLL-growth/survival signal. Also, high-level expression of miR-150 was a significant independent predictor of longer treatment-free survival or overall survival, whereas an inverse association was observed for high-level expression of GAB1 or FOXP1 for overall survival. This study demonstrates that expression of miR-150 can influence the relative expression of GAB1 and FOXP1 and the signaling potential of the B-cell receptor, thereby possibly accounting for the noted association of expression of miR-150 and disease outcome. © 2014 by The American Society of Hematology.

Effective targeting of STAT5-mediated survival in myeloproliferative neoplasms using ABT-737 combined with rapamycin

PubMed Central

Li, Geqiang; Miskimen, Kristy L.; Wang, Zhengqi; Xie, Xiu Yan; Tse, William; Gouilleux, Fabrice; Moriggl, Richard; Bunting, Kevin D.

2010-01-01

Signal transducer and activator of transcription-5 (STAT5) is a critical transcription factor for normal hematopoiesis and its sustained activation is associated with hematologic malignancy. A persistently active mutant of STAT5 (STAT5aS711F) associates with Grb2 associated binding protein 2 (Gab2) in myeloid leukemias and promotes growth in vitro through AKT activation. Here we have retrovirally transduced wild-type or Gab2−/− mouse bone marrow cells expressing STAT5aS711F and transplanted into irradiated recipient mice to test an in vivo myeloproliferative disease (MPD) model. To target Gab2-independent AKT/mTOR activation, wild-type mice were treated separately with rapamycin. In either case, mice lacking Gab2 or treated with rapamycin displayed attenuated myeloid hyperplasia and modestly improved survival, but the effects were not cytotoxic and were reversible. To improve upon this approach, in vitro targeting of STAT5-mediated AKT/mTOR using rapamycin was combined with inhibition of the STAT5 direct target genes bcl-2 and bcl-XL using ABT-737. Striking synergy with both drugs was observed in mouse BaF3 cells expressing STAT5aS711F, TEL-JAK2, or BCR-ABL and in the relatively single agent-resistant human BCR-ABL positive K562 cell line. Therefore, targeting distinct STAT5 mediated survival signals, e.g. bcl-2/bcl-XL and AKT/mTOR may be an effective therapeutic approach for human myeloproliferative neoplasms. PMID:20535152

Surface-structured bacterial cellulose with guided assembly-based biolithography (GAB).

PubMed

Bottan, Simone; Robotti, Francesco; Jayathissa, Prageeth; Hegglin, Alicia; Bahamonde, Nicolas; Heredia-Guerrero, José A; Bayer, Ilker S; Scarpellini, Alice; Merker, Hannes; Lindenblatt, Nicole; Poulikakos, Dimos; Ferrari, Aldo

2015-01-27

A powerful replica molding methodology to transfer on-demand functional topographies to the surface of bacterial cellulose nanofiber textures is presented. With this method, termed guided assembly-based biolithography (GAB), a surface-structured polydimethylsiloxane (PDMS) mold is introduced at the gas-liquid interface of an Acetobacter xylinum culture. Upon bacterial fermentation, the generated bacterial cellulose nanofibers are assembled in a three-dimensional network reproducing the geometric shape imposed by the mold. Additionally, GAB yields directional alignment of individual nanofibers and memory of the transferred geometrical features upon dehydration and rehydration of the substrates. Scanning electron and atomic force microscopy are used to establish the good fidelity of this facile and affordable method. Interaction of surface-structured bacterial cellulose substrates with human fibroblasts and keratinocytes illustrates the efficient control of cellular activities which are fundamental in skin wound healing and tissue regeneration. The deployment of surface-structured bacterial cellulose substrates in model animals as skin wound dressing or body implant further proves the high durability and low inflammatory response to the material over a period of 21 days, demonstrating beneficial effects of surface structure on skin regeneration.

Eu2+-doped Ba2GaB4O9Cl blue-emitting phosphor with high color purity for near-UV-pumped white light-emitting diodes

NASA Astrophysics Data System (ADS)

Gao, Zhiwen; Deng, Huajuan; Xue, Na; Jeong, Jung Hyun; Yu, Ruijin

2018-01-01

Eu2+-doped borate fluoride Ba2GaB4O9Cl was synthesized by the conventional high-temperature solid-state reaction. The crystal structure and luminescence properties of the phosphors, as well as their thermal luminescence quenching capabilities and CIE chromaticity coordinates were systematically investigated. Under the excitation at 340 nm, the phosphor exhibited an asymmetric broad-band blue emission with a peak at 445 nm, which is ascribed to the 4f-5d transition of Eu2+. It was further proved that energy transfer among the nearest neighbor ions is the major mechanism for concentration quenching of Eu2+ in Ba2-xGaB4O9Cl:xEu2+ phosphors. The luminescence quenching temperature is 432 K. The CIE color coordinates are very close to those of BaMgAl10O17:Eu2+ (BAM). All the properties indicated that the blue-emitting Ba2GaB4O9Cl:Eu2+ phosphor has potential application in white LEDs.

Quality properties and adsorption behavior of freeze-dried beef meat from the Biceps femoris and Semimembranosus muscles.

PubMed

Aykın, Elif; Erbaş, Mustafa

2016-11-01

The aim of this research was to determine the quality properties and adsorption behavior of freeze-dried beef meat from the Biceps femoris and Semimembranosus muscles. Most quality properties of both muscles were similar apart from total fat content. Freeze-dried meat pieces were kept in ten different equilibrium levels of relative humidity (2.0-97.3%) at 5, 15, 25 and 30°C. The experimental data were evaluated using BET (Brunauer-Emmett-Teller) and GAB (Guggenheim, Anderson and deBoer) models. The equilibrium moisture contents of freeze-dried Biceps femoris were lower than those of Semimembranosus at all water activities and temperature. The constants m0 and C of BET and GAB equations were determined to be between 6.27 and 8.07g/100g dry matter and 9.32-13.73, respectively. Constant k was about 0.90 at all temperatures, and the GAB equation exhibited a better fit to the experimental data of both muscles as a result of all %E values being approximately equal to 10%. Copyright © 2016 Elsevier Ltd. All rights reserved.

Digital model analysis of the principal artesian aquifer, Savannah, Georgia area

USGS Publications Warehouse

Counts, H.B.; Krause, R.E.

1977-01-01

A digital model of the principal artesian aquifer has been developed for the Savannah, Georgia, area. The model simulates the response of the aquifer system to various hydrologic stresses. Model results of the water levels and water-level changes are shown on maps. Computations may be extended in time, indicating changes in pumpage were applied to the system and probable results calculated. Drawdown or water-level differences were computed, showing comparisons of different water management alternatives. (Woodard-USGS)

Water-resources appraisal of the Wet Mountain Valley, in parts of Custer and Fremont counties, Colorado

USGS Publications Warehouse

Londquist, C.J.; Livingston, R.K.

1978-01-01

The Wet Mountain Valley is an intermontane trough filled to a depth of at least 6,700 feet with unconsolidated deposits. Ground water occurs under both artesian and water-table conditions within the basin-fill aquifer and ground-water moverment is toward Grape and Texas Creeks. The depth to the water table is less than 10 feet in an area of about 40 square miles along the central part of the valley and is less than 100 feet in most of the remainder of the valley. Ground water stored in the upper 200 feet of saturated basin-fill sediments is estimated to total 1.5 million acre-feet. Yields greater than 50 gallons per minute generally can be expected from wells in the central part of the basin-fill aquifer, and yields less than 50 gallons per minute are generally reported from wells around the edge of the basin-fill aquifer. Yields of wells in the mountainous areas are generally less than 20 gallons per minute. Most streamflow occurs as a result of snowmelt runoff during June and July. The long-term annual runoff at seven stations ranges from an estimated 0.02 cubic foot per second per square mile to an estimated 1.17 cubic feet per second per square mile, generaly increasing with station altitude. Generalized annyal water budgets for two areas in the Wet Mountain Valley indicate that surface-water outflow is only 7 to 11 percent of the total water supply from precipitation and other sources. The remaining water is lost to the atmosphere by evapotranspiration. The quality of both the surface and ground water is generally within the recommended limits for drinking water set by the U.S. Public Health Service. (Woodard-USGS)

Water resources of the Myakka River basin area, southwest Florida

USGS Publications Warehouse

Joyner, Boyd F.; Sutcliffe, Horace

1976-01-01

Ground water in the Myakka River basin area of southwest Floria is obtained from a water-table aquifer and from five zones in an artesian aquifer. Wells in the water-table aquifer yield generally less than 50 gpm and dissolved solids concentration is less than 500 mg/liter except in coastal areas and the peninsula southwest of the Myakka River estuary. Wells in the Venice area that tap zone 1 usually yield less than 30 gmp. The quality of water is good except in the peninsula area. Zone 2 is the most highly developed aquifer in the heavily populated coastal areas. Wells yield as much as 200 gpm. In most areas, water is of acceptable quality. Wells that tap zone 3 yield as much as 500 gmp. Fluoride concentration ranges from 1 to 3.5 mg/liter. Zone 4 yields as much as 1,500 gpm to large diameter wells. Except in the extreme northeastern part of the area water from zone 4 usually contains high concentrations of fluoride and sulfate. Zone 5 is the most productive aquifer in the area, but dissolved solids concentrations usually are too high for public supply except in the extreme northeast. Surface water derived from natural drainage is of good quality except for occasional high color in summer. Most of the streams in the Myakka River basin area have small drainage basins, are of short channel length, and do not yield high volumes of flow. During the dry season, streamflow is maintained by groundwater discharge, and, as a result, chloride, sulfate, and dissolved solids concentrations and the hardness of the water are above drinking water standards for some streams. (Woodard-USGS)

Investigating the Mechanism of Mena(INV)-Driven Metastasis

DTIC Science & Technology

2013-12-01

GAB1 ,  ZO2,  BCAR1,  EGFR,  TYK2,  INPPL,   GRLF1,  Pragmin,  GSK3,  ARHGAP12,  EphA2...endosomes   ITSN2,   Gab1 ,  EGFR,  SHC1,  Ship2,  NWASP,  MAPK1,  MAPK3   Interaction  with  Mena   INPPL,  EGFR   Table 1: A...addition, the effect of FN on MenaINV-expressing cells was blocked by an antibody specifically blocking active α5 (P1D6) but not by cilengitide, a

Reliable groundwater levels: failures and lessons learned from modeling and monitoring studies

NASA Astrophysics Data System (ADS)

Van Lanen, Henny A. J.

2017-04-01

Adequate management of groundwater resources requires an a priori assessment of impacts of intended groundwater abstractions. Usually, groundwater flow modeling is used to simulate the influence of the planned abstraction on groundwater levels. Model performance is tested by using observed groundwater levels. Where a multi-aquifer system occurs, groundwater levels in the different aquifers have to be monitored through observation wells with filters at different depths, i.e. above the impermeable clay layer (phreatic water level) and beneath (artesian aquifer level). A reliable artesian level can only be measured if the space between the outer wall of the borehole (vertical narrow shaft) and the observation well is refilled with impermeable material at the correct depth (post-drilling phase) to prevent a vertical hydraulic connection between the artesian and phreatic aquifer. We were involved in improper refilling, which led to impossibility to monitor reliable artesian aquifer levels. At the location of the artesian observation well, a freely overflowing spring was seen, which implied water leakage from the artesian aquifer affected the artesian groundwater level. Careful checking of the monitoring sites in a study area is a prerequisite to use observations for model performance assessment. After model testing the groundwater model is forced with proposed groundwater abstractions (sites, extraction rates). The abstracted groundwater volume is compensated by a reduction of groundwater flow to the drainage network and the model simulates associated groundwater tables. The drawdown of groundwater level is calculated by comparing the simulated groundwater level with and without groundwater abstraction. In lowland areas, such as vast areas of the Netherlands, the groundwater model has to consider a variable drainage network, which means that small streams only carry water during the wet winter season, and run dry during the summer. The main streams drain groundwater throughout the whole year. We simulated groundwater levels with a steady-state groundwater flow model with and without groundwater abstraction for the wet and dry season, i.e. considering a high (all streams included) and low drainage density (only major streams), respectively. Groundwater drawdown maps for the wet and dry season were compiled. Stakeholders (farmers, ecologists) were very concerned about the large drawdowns. After a while and discussions with the Water Supply Company and stakeholders, we realised that we had calculated unrealistic large drawdowns of the phreatic groundwater level for the dry season. We learnt that by applying a steady-state model we did not take into account the large volume of groundwater, which is released from the groundwater storage. The transient groundwater model that we developed then, showed that the volume of groundwater released from the storage per unit of time is significant and that the drawdown of the phreatic groundwater level by the end of the dry period is substantially smaller than the one simulated by the steady-state model. The results of the transient groundwater flow model agreed rather well with the pumping test that lasted the whole dry season.

Is the simian virus SV40 associated with idiopathic focal segmental glomerulosclerosis in humans?

PubMed

Galdenzi, Gabriella; Lupo, Antonio; Anglani, Franca; Perini, Marino; Galeazzi, Luciano; Giunta, Sergio; Marcantoni, Carmelita; Del Prete, Dorella; Graziotto, Romina; D'angelo, Angela; Maschio, Giuseppe; Gambaro, Giovanni

2003-01-01

Glomerulosclerosis was reported in mice transgenic for the simian polyomavirus SV40 early region that contains the transforming sequences encoding the SV40 large T-antigen (TAG). This was discovered when an SV40 epidemic occurred following the use of contaminated polio vaccines during 1955-1963, and led to investigations that showed an association between SV40 infection and tumors in humans. We investigated the possible association of SV40 infection and idiopathic focal segmental glomerulosclerosis (FSGS). The study was performed in 17 Bouin-fixed, paraffin-embedded renal biopsies from FSGS patients and 10 matched biopsies from patients with IgA glomerulonephritis; all patients had undergone polio vaccination in the early 1960s. Extracted DNA was polymerase chain reaction (PCR) amplified using SV.for3/SV.rev primers and GabE1/GabE2 primers; both sets of primers map in the region of SV40 TAG sequences, and amplify a fragment of respectively 105-bp and 135-bp. The biopsies considered were those in which the DNA was sufficiently intact to allow amplification of a fragment of 102-bp of the ApoE gene. Three FSGS and none of the IgA biopsies were positive for the SV.for3/SV.rev fragment. Conversely, amplification with GabE1/GabE2 primers did not lead to any specific product in either the IgA or FSGS biopsies. Restriction fragment length polymorphism and sequencing analyses revealed that the positive results obtained with the SV.for3/SV.rev primers were due to amplicons generated by multiple dimerization of forward and reverse primers. With the limited number of patients investigated, this study excludes the hypothesis that SV40 is associated with idiopathic FSGS.

Hydrogeochemistry and stable isotopes of ground and surface waters from two adjacent closed basins, Atacama Desert, northern Chile

USGS Publications Warehouse

Alpers, Charles N.; Whittemore, Donald O.

1990-01-01

The geochemistry and stable isotopes of groundwaters, surface waters, and precipitation indicate different sources of some dissolved constituents, but a common source of recharge and other constituents in two adjacent closed basins in the Atacama Desert region of northern Chile (24??15???-24??45???S). Waters from artesian wells, trenches, and ephemeral streams in the Punta Negra Basin are characterized by concentrations of Na>Ca>Mg and Cl ???SO4, with TDS Mg ??? Ca and SO4 > Cl, with TDS also Mg ??? Ca and SO4 > Cl, but with TDS up to 40 g/l. The deep mine waters have pH between 3.2 and 3.9, and are high in dissolved CO2 (??13 C = -4.8%PDB), indicating probable interaction with oxidizing sulfides. The deep mine waters have ??18O values of ???-1.8%.compared with values < -3.5??? for other Hamburgo Basin waters; thus the mine waters may represent a mixture of meteoric waters with deeper "metamorphic" waters, which had interacted with rocks and exchanged oxygen isotopes at elevated temperatures. Alternatively, the deep mine waters may represent fossil meteoric waters which evolved isotopically along an evaporative trend starting from values quite depleted in ??18O and ??Dd relative to either precipitation or shallow groundwaters. High I/Br ratios in the Hamburgo Basin waters and La Escondida mine waters are consistent with regionally high I in surficial deposits in the Atacama Desert region and may represent dissolution of a wind-blown evaporite component. Rain and snow collected during June 1984, indicate systematic ??18O and ??D fractionation with increasing elevation between 3150 and 4180 m a.s.l. (-0.21??.??18O and -1.7??.??D per 100 m). Excluding the deep mine waters from La Escondida, the waters from the Hamburgo and Punta Negra Basins have similar ??D and ??18O values and together show a distinct evaporative trend (??D = 5.0 ??18O - 20.2). Snowmelt from the central Andes Cordillera to the east is the most likely source of recharge to both basins. Some of the waters in the Hamburgo Basin may have been recharged during late Pleistocene, when the climate was wetter and a lake filled the intervening Punta Negra Basin, as suggested by recent archaeological and geomorphological studies. ?? 1990.

Occurrence and distribution of color and hydrogen sulfide in water of the principal artesian aquifers in the Valdosta area, Georgia

USGS Publications Warehouse

Krause, Richard E.

1976-01-01

Hydrogen sulfide and color occur in objectionable amounts in ground water from the principal artesian aquifer in the Valdosta , Ga., area. Generally, water from wells south of Valdosta is high in hydrogen sulfide; water from wells north of the city is high in color. Water with high sulfate is likely to be a problem in wells deeper than about 540 ft. Heavy pumpage concentrated in a small area may cause high-sulfate water to migrate vertically upward into shallower wells. (Woodard-USGS)

Sorption isotherm characteristics of aonla flakes.

PubMed

Alam, Md Shafiq; Singh, Amarjit

2011-06-01

The equilibrium moisture content was determined for un-osmosed and osmosed (salt osmosed and sugar osmosed) aonla flakes using the static method at temperatures of 25, 40,50, 60 and 70 °C over a range of relative humidities from 20 to 90%. The sorption capacity of aonla decreased with an increase in temperature at constant water activity. The sorption isotherms exhibited hysteresis, in which the equilibrium moisture content was higher at a particular equilibrium relative humidity for desorption curve than for adsorption. The hysteresis effect was more pertinent for un-osmosed and salt osmosed samples in comparison to sugar osmosed samples. Five models namely the modified Chung Pfost, modified Halsey, modified Henderson, modified Exponential and Guggenheim-Anderson-de Boer (GAB) were evaluated to determine the best fit for the experimental data. For both adsorption and desorption process of aonla fruit, the equilibrium moisture content of un-osmosed and osmosed aonla samples can be predicted well by GAB model as well as modified Exponential model. Moreover, the modified Exponential model was found to be the best for describing the sorption behaviour of un-osmosed and salt osmosed samples while, GAB model for sugar osmosed aonla samples.

Binding of the cSH3 Domain of Grb2 Adaptor to Two Distinct RXXK Motifs within Gab1 Docker Employs Differential Mechanisms

PubMed Central

McDonald, Caleb B.; Seldeen, Kenneth L.; Deegan, Brian J.; Bhat, Vikas; Farooq, Amjad

2010-01-01

A ubiquitous component of cellular signaling machinery, Gab1 docker plays a pivotal role in routing extracellular information in the form of growth factors and cytokines to downstream targets such as transcription factors within the nucleus. Here, using isothermal titration calorimetry (ITC) in combination with macromolecular modeling (MM), we show that although Gab1 contains four distinct RXXK motifs, designated G1, G2, G3 and G4, only G1 and G2 motifs bind to the cSH3 domain of Grb2 adaptor and do so with distinct mechanisms. Thus, while the G1 motif strictly requires the PPRPPKP consensus sequence for high-affinity binding to the cSH3 domain, the G2 motif displays preference for the PXVXRXLKPXR consensus. Such sequential differences in the binding of G1 and G2 motifs arise from their ability to adopt distinct polyproline type II (PPII)- and 310-helical conformations upon binding to the cSH3 domain, respectively. Collectively, our study provides detailed biophysical insights into a key protein-protein interaction involved in a diverse array of signaling cascades central to health and disease. PMID:21472810

Using Sentinel-2A multispectral imagery to explore for deep groundwater resources in the Ceres-Tankwa Karoo, Western Cape, South Africa: Significance for the 'water-energy(-food) nexus' in an arid region

NASA Astrophysics Data System (ADS)

Hartnady, Chris; Wise, Edward; Hartnady, Michael; Olianti, Camille; Hay, E. Rowena

2017-04-01

The Ceres-Tankwa region is an arid region in the south-western part of the main Karoo Basin, underlain by folded and faulted strata of the Cape and lower Karoo Supergroups in the syntaxis zone between the Western and Southern branches of the Cape Fold Belt. Explored for oil in the mid-1960s, with the drilling of the >3000 m deep KL1/65 borehole, the area recently attracted attention as a potential shale-gas prospect with the drilling in 2015 of the 671 m-deep KZF-1 research borehole on the farm Zandfontein (de Kock et al, 2016). KZF-1 encountered no positive indication of methane gas in the carbonaceous shale target but intersected a strong flow of deep groundwater from fractures in the basal Dwyka tillite. The accidental discovery of deep artesian groundwater, probably originating from the underlying Cape Supergroup aquifers and of significantly better quality than the shallow aquifer utilised by local farmers, has important implications for future development here. Using 13-channel multispectral data from the European Space Agency satellite Sentinel-2A, a false-colour composite image, centred about the KZF-1 location, was assembled by combination of selected spectral band-ratios. Stratigraphic layering and associated folding within the hitherto undivided, pelitic Tierberg Formation (Ecca Group), is revealed in striking new detail, together with narrow lines of stratal offset corresponding to previously unmapped faults. KZF-1 is evidently sited within an anomalous NE/SW-striking belt, unlike the general NNW/SSE strike of Cape-Karoo sequence strata in the north-western part of the image. Associated with a notable strike change of a lower Tierberg marker unit, subparallel to and aligned with a similar trend in the Swartruggens mountain foothills to the SW, a deep-seated, controlling, NE/SW-striking fault structure may continue downwards from the lower Karoo units into the underlying Cape strata, providing hydraulic connection. With the looming threat of global warming and increasing water scarcity in semi-arid regions, deep artesian groundwater systems provide a long-term solution to future demands for water, food and power. In contrast to shale-gas development, which competes for the scarce water resource and poses a substantial pollution threat, an alternative, synergistic and conjunctive development of solar energy, specifically Concentrating Solar Power plants facilitated by the deep artesian groundwater resource, is envisaged for the Ceres-Tankwa and other parts of the Southern Karoo, in a proposed "Sores-Kamma (Sun-Water) Initiative". In this effort, Sentinel-2A-based lithological mapping is integrated with a new digital elevation model, providing geomorphometry and morphotectonic interpretations, and with the systematic monitoring of surface- and groundwater fluxes using a conjunction of radar satellite, Global Navigation Satellite Systems and microgravity approaches. Reference De Kock, M.O., Beukes, N.J., Götz, A.E., Cole, D., Birch, A., Withers, A. and Van Niekerk, H.S. 2016. Open file progress report on exploration of the southern Karoo Basin through CIMERA-KARIN borehole KZF-1 in the Tankwa Karoo, Witzenberg (Ceres) District. 12 pp. Available online at http://www.cimera.co.za/index.php/karin-feedback

Assessing the hydraulic connection between fresh water aquifers and unconventional gas production using methane and stable isotopes

NASA Astrophysics Data System (ADS)

Iverach, Charlotte P.; Cendón, Dioni I.; Hankin, Stuart I.; Lowry, Dave; Fisher, Rebecca E.; France, James L.; Nisbet, Euan G.; Baker, Andy; Kelly, Bryce F. J.

2015-04-01

Unconventional gas developments pose a risk to groundwater quality and quantity in adjacent or overlying aquifers. To manage these risks there is a need to measure the background concentration of indicator groundwater chemicals and to map pathways of hydraulic connectivity between aquifers. This study presents methane (CH4) concentration and isotopic composition, dissolved organic carbon concentration ([DOC]) and tritium (3H) activity data from an area of expanding coal seam gas (CSG) exploration and production (Condamine Catchment, south-east Queensland, Australia). The target formation for gas production within the Condamine Catchment is the Walloon Coal Measures (WCM). This is a 700 m thick, low-rank CSG resource, which consists of numerous thin discontinuous lenses of coal separated by very fine-to medium-grained sandstone, siltstone, and mudstone, with minor calcareous sandstone, impure limestone and ironstone. The thickness of the coal makes up less than 10% of the total thickness of the unit. The WCM are overlain by sandstone formations, which form part of the Great Artesian Basin (GAB). The Condamine Alluvium fills a paleo-valley carved through the above formations. A combination of groundwater and degassing air samples were collected from irrigation bores and government groundwater monitoring boreholes. Degassing air samples were collected using an SKC 222-2301 air pump, which pumped the gas into 3 L Tedlar bags. The groundwater was analysed for 3H and [DOC]. A mobile CH4 survey was undertaken to continuously sample air in and around areas of agricultural and unconventional gas production. The isotopic signature of gas from the WCM was determined by sampling gas that was off-gassing from a co-produced water holding pond as it was the largest emission that could be directly linked to the WCM. This was used to determine the source signature of the CH4 from the WCM. We used Keeling plots to identify the source signature of the gas sampled. For the borehole samples these plots assume that there are only two sources of CH4, each with a unique isotopic signature. When the two sources mix in varying proportions they will plot along a straight line in the Keeling plot. Geometric mean displacement was used to fit a regression line and determine the intercept value. Within the Keeling plot, samples clustered according to their 3H and [DOC] values. One cluster is associated with near surface biological processes, while the other cluster can be attributed to gas sourced from the WCM. This indicates that in places there is hydraulic connectivity between the WCM and the overlying Condamine Alluvium. The results from this case study demonstrate that measuring 3H activity, [DOC] and CH4 concentrations in combination with CH4 isotopic analysis can provide an early indicator of hydraulic connectivity in areas of expanding unconventional gas development.

Nocturnal and diurnal activity of armored suckermouth catfish (Loricariidae: Pterygoplichthys) associated with wintering Florida manatees (Trichechus manatus latirostris)

USGS Publications Warehouse

Nico, Leo G.

2010-01-01

Several Pterygoplichthys species, members of the Neotropical catfish family Loricariidae, have been widely introduced outside their native ranges. In this paper, I present observations on the diel activity pattern of non-native Pterygoplichthys, tentatively identified as P. disjunctivus, with respect to their attachment and grazing on endangered Florida manatees, Trichechus manatus latirostris. The study was conducted in December 2009 at Volusia Blue Spring, an artesianal spring system in the St. Johns River basin, Florida (USA). Supplemented by information gathered during previous visits to the spring site, this study revealed that adult Pterygoplichthys are active throughout the diel period (day, twilight and night). However, juvenile Pterygoplichthys were largely nocturnal and only at night did they consistently join adults in attaching to manatees. The juveniles generally remain hidden during the day, probably responding to presence of diurnal predators, mainly birds. Differences in diel behaviors among different Pterygoplichthys size classes in Florida are consistent with published observations on loricariids inhabiting clearwater streams within their native ranges.

Wavelet analysis of lunar semidiurnal tidal influence on selected inland rivers across the globe

PubMed Central

Briciu, Andrei-Emil

2014-01-01

The lunar semidiurnal influence is already known for tidal rivers. The moon also influences inland rivers at a monthly scale through precipitation. We show that, for some non-tidal rivers, with special geological conditions, the lunar semidiurnal tidal oscillation can be detected. The moon has semidiurnal tidal influence on groundwater, which will then export it to streamflow. Long time series with high frequency measurements were analysed by using standard wavelet analysis techniques. The lunar semidiurnal signal explains the daily double-peaked river level evolution of inland gauges. It is stronger where springs with high discharge occur, especially in the area of Edwards-Trinity and Great Artesian Basin aquifers and in areas with dolomite/limestone strata. The average maximum semidiurnal peaks range between 0.002 and 0.1 m. This secondary effect of the earth tides has important implications in predicting high resolution hydrographs, in the water cycle of wetlands and in water management. PMID:24569793

Binding of the cSH3 domain of Grb2 adaptor to two distinct RXXK motifs within Gab1 docker employs differential mechanisms.

PubMed

McDonald, Caleb B; Seldeen, Kenneth L; Deegan, Brian J; Bhat, Vikas; Farooq, Amjad

2011-01-01

A ubiquitous component of cellular signaling machinery, Gab1 docker plays a pivotal role in routing extracellular information in the form of growth factors and cytokines to downstream targets such as transcription factors within the nucleus. Here, using isothermal titration calorimetry (ITC) in combination with macromolecular modeling (MM), we show that although Gab1 contains four distinct RXXK motifs, designated G1, G2, G3, and G4, only G1 and G2 motifs bind to the cSH3 domain of Grb2 adaptor and do so with distinct mechanisms. Thus, while the G1 motif strictly requires the PPRPPKP consensus sequence for high-affinity binding to the cSH3 domain, the G2 motif displays preference for the PXVXRXLKPXR consensus. Such sequential differences in the binding of G1 and G2 motifs arise from their ability to adopt distinct polyproline type II (PPII)- and 3(10) -helical conformations upon binding to the cSH3 domain, respectively. Collectively, our study provides detailed biophysical insights into a key protein-protein interaction involved in a diverse array of signaling cascades central to health and disease. Copyright © 2010 John Wiley & Sons, Ltd.

As(III) and As(V) removal from the aqueous phase via adsorption onto acid mine drainage sludge (AMDS) alginate beads and goethite alginate beads.

PubMed

Lee, Hongkyun; Kim, Dohyeong; Kim, Jongsik; Ji, Min-Kyu; Han, Young-Soo; Park, Young-Tae; Yun, Hyun-Shik; Choi, Jaeyoung

2015-07-15

Acid mine drainage sludge (AMDS) is a solid waste generated following the neutralization of acid mine drainage (AMD). This material entrapped in calcium alginate was investigated for the sorption of As(III) and As(V). Three different adsorbent materials were prepared: AMDS alginate beads (AABs), goethite alginate beads (GABs), and pure alginate beads. The effects of pH and the adsorption kinetics were investigated, and the adsorption isotherms were also evaluated. The optimum pH range using the AABs was determined to be within 2-10 for As(III) and 2-9 for As(V). Adsorption equilibrium data were evaluated using the Langmuir isotherm model, and the maximum adsorption capacity qmax was 18.25 and 4.97 mg g(-1) for As(III) on AAB and GAB, respectively, and 21.79 and 10.92 mg g(-1) for As(V) on AAB and GAB, respectively. The adsorption of As(III) and As(V) was observed to follow pseudo-second order kinetics. The As K-edge X-ray absorption near-edge structure (XANES) revealed that the adsorbed As(III) on the AABs was oxidized to As(V) via manganese oxide in the AMDS. Copyright © 2015 Elsevier B.V. All rights reserved.

Sources and controls for the mobility of arsenic in oxidizing groundwaters from loess-type sediments in arid/semi-arid dry climates - evidence from the Chaco-Pampean plain (Argentina).

PubMed

Nicolli, Hugo B; Bundschuh, Jochen; García, Jorge W; Falcón, Carlos M; Jean, Jiin-Shuh

2010-11-01

In oxidizing aquifers, arsenic (As) mobilization from sediments into groundwater is controlled by pH-dependent As desorption from and dissolution of mineral phases. If climate is dry, then the process of evaporative concentration contributes further to the total concentration of dissolved As. In this paper the principal As mobility controls under these conditions have been demonstrated for Salí River alluvial basin in NW Argentina (Tucumán Province; 7000 km(2)), which is representative for other basins or areas of the predominantly semi-arid Chaco-Pampean plain (1,000,000 km(2)) which is one of the world's largest regions affected by high As concentrations in groundwater. Detailed hydrogeochemical studies have been performed in the Salí River basin where 85 groundwater samples from shallow aquifers (42 samples), deep samples (26 samples) and artesian aquifers (17 samples) have been collected. Arsenic concentrations range from 11.4 to 1660 μg L(-1) leaving 100% of the investigated waters above the provisional WHO guideline value of 10 μg L(-1). A strong positive correlation among As, F, and V in shallow groundwaters was found. The correlations among those trace elements and U, B and Mo have less significance. High pH (up to 9.2) and high bicarbonate (HCO(3)) concentrations favour leaching from pyroclastic materials, including volcanic glass which is present to 20-25% in the loess-type aquifer sediments and yield higher trace element concentrations in groundwater from shallow aquifers compared to deep and artesian aquifers. The significant increase in minor and trace element concentrations and salinity in shallow aquifers is related to strong evaporation under semi-arid climatic conditions. Sorption of As and associated minor and trace elements (F, U, B, Mo and V) onto the surface of Fe-, Al- and Mn-oxides and oxi-hydroxides, restricts the mobilization of these elements into groundwater. Nevertheless, this does not hold in the case of the shallow unconfined groundwaters with high pH and high concentrations of potential competitors for adsorption sites (HCO(3), V, P, etc.). Under these geochemical conditions, desorption of the above mentioned anions and oxyanions occurs as a key process for As mobilization, resulting in an increase of minor and trace element concentrations. These geochemical processes that control the concentrations of dissolved As and other trace elements and which determine the groundwater quality especially in the shallow aquifers, are comparable to other areas with high As concentrations in groundwater of oxidizing aquifers and semi-arid or arid climate, which are found in many parts of the world, such as the western sectors of the USA, Mexico, northern Chile, Turkey, Mongolia, central and northern China, and central and northwestern Argentina. Copyright © 2010 Elsevier Ltd. All rights reserved.

Geology and ground-water resources of the island of Oahu, Hawaii

USGS Publications Warehouse

Stearns, Harold T.; Vaksvik, Knute N.

1935-01-01

Oahu, one of the islands of the Hawaiian group, lies in the Mid-Pacific 2,100 miles southwest of San Francisco. The principal city is Honolulu. The Koolau Range makes up the eastern part of the island, and the Waianae Range the western part. Both are extinct basaltic volcanoes deeply dissected by erosion. The Koolau Volcano was the later to become extinct. The Waianae Range is made up of three groups of lavas erupted in Tertiary and possibly in early Pleistocene time. The exposed part of the older lava is nearly 2,000 feet thick and consists largely of thin-bedded pahoehoe. It is separated in most places from the middle lavas by an angular unconformity and talus breccia and in a few places by an erosional unconformity. The middle basalts are about 2,000 feet thick and closely resemble the lower ones except that they contain more aa. The upper lavas reach a thickness of about 2,300 feet and are mostly massive aa flows. The last eruptions produced large cinder cones and some nephelite basalts. The Waianae Volcano, like other Hawaiian volcanoes, produced only small amounts of ash, and the lavas were largely extruded from fissures a few feet wide, now occupied by dikes. The center of activity was near Kolekole Pass, at the head of Lualualei Valley.The Koolau Volcano is made up of two groups of lavas extruded in Tertiary and early Pleistocene (?) time. The older group, the Kailua volcanic series, is greatly altered by hydrothermal action and was extruded from fissures near Lanikai. The flows of the younger group, the Koolau volcanic series, were extruded from fissures about a mile south of the Kailua rift and have an exposed thickness of about 3,000 feet. The Koolau Volcano produced even less ash than the Waianae Volcano, and its flows are thin-bedded pahoehoe and aa. The eruptive center of the Koolau Volcano lies between Kaneohe and Waimanalo. Great amounts of both the Waianae and Koolau Ranges were removed by fluvial and marine erosion during the Pleistocene. The master streams are characterized by deep amphitheater-headed valleys. After this erosion cycle the island was submerged more than 1,200 feet, and these great valleys were drowned and alluviated. Besides this submergence, several strand lines, preserved up to 100 feet above present sea level occur, which may be due to world-wide changes in sea level in response to the withdrawal and restoration of water concurrent with the advances and recessions of the polar ice caps and to accompanying changes in the ocean floor. During this time of shifting ocean levels spasmodic eruptions occurred on the southeast end of the Koolau Range, producing numerous lava flows and tuff cones, most of which are nephelite basalt. The last of these eruptions occurred in Recent time. A description of the climate, rates of run-off, and results of experiments to determine evaporation and transpiration in the areas of high rainfall are given. It was found that the consumptive use decreases materially and becomes a very small percentage of the rainfall in the areas of high precipitation. The lava rocks of the island are very permeable and, because of a rainfall reaching a maximum of 300 inches a year, carry large amounts of ground water, confined and unconfined, basal and perched. The basal ground water floats on salt water because of its lower specific gravity. Consequently for each foot the water table stands above sea level, salt water lies about 42 feet below sea level, in accordance with the sea along the coast as basal ground water. In most places the lava rocks along the shore are overlain by an impermeable or nearly impermeable caprock consisting of submerged lateritic soils and marine noncalcareous sediments. These deposits retard the escape of basal ground water into the sea and give rise to artesian water, but unlike most other artesian systems, this one has no lower restraining formation. The artesian water is the principal source of domestic, municipal, and irrigation supplies. The average annual quantity pumped for the period 1928 to 1933 amounted to about 105,000,000,000 gallons, nearly 90 percent of which came from Koolau hasalt and the remainder from Waianae basalt. There are ten artesian areas in the Koolau Range and two in the Waianae Range. Hydraulic gradients in these basins were found to range from 1.2 to 3 feet to the mile. Because of these extremely flat gradients and the high permeability of the aquifers it is possible to reverse the hydraulic gradients by draft and make the water flow from one artesian area to another. The artesian water levels fluctuate in response to seasonal variations in draft and recharge and in a lesser way to tidal, barometric, and seismic pressures. The water, as shown by chemical analysis, is of excellent quality except where it is contaminated with sea water. Methods have been devised for freshening wells that have gone salty, for detecting leaks, for sealing leaky and defective wells, and for recharging the artesian basins. Owing to the danger of the wells becoming brackish with increased draft, it is believed that further large developments will be more successful if shafts are sunk to sea level in the basalt as far inland as practicable, and tunnels are driven from the bottom of the shafts near the top of the saturated zone. Favorable places for such development exist in Honolulu.In addition to the basal water in the volcanic rocks, water is found in the recent gravel, beach, and dune deposits, and the emerged reef limestone. This water has been recovered by wells and tunnels, and there are favorable localities for developing additional water of this type. The island contains two types of basal springs—those like the Pearl Harbor Springs, which issue from basalt and are supplied by overflow and leakage from the artesian basin, and those which issue from the coastal-plain sediments and are mainly return irrigation water. The total quantity of basal ground water issuing as springs is estimated to be 100,000,000 gallons a day. Ground water occurs at high levels, confined by dikes and perched on tuff, alluvium, and soil beds. These structures give rise to innumerable high-level springs. In the Koolau Range 60 tunnels yield about 33,000,000 gallons daily, of which about 95 percent is obtained from tunnels penetrating the dike complex of the Koolau volcanic series, about 2 percent from tunnels entering post-Koolau ash or tuff deposits, and the remainder from tunnels whose geologic relations are not certainly known. The average daily yield of the tunnels that recover dike water is 2,330 gallons a foot, but the average daily yield of the tunnels in post-Koolau tuff is 450 gallons a foot, and that of the tunnels in alluvium or soil is only 23 gallons a foot. Owing largely to the much lower rainfall on the Waianac Range, its 35 tunnels (not including two new tunnels under construction) yield only about 2,400,000 gallons daily, about 94 percent of which is believed to be obtained from dike systems. The average daily yield of the tunnels in this range that are supplied by dike systems is 581 gallons a foot, as compared to 5 gallons a foot from tunnels in ash or tuff. An extensive tunnel system is proposed to develop a large supply of high-level water for Honolulu from the dike complex of the Koolau series, and high-level water can be recovered by tunnels at many other places. The average daily discharge of all high-level springs in the Koolau Range is about 58,000,000 gallons, of which about 94 percent comes from the Koolau dike complex and about 6 percent from post-Koolau volcanic rocks. The average daily discharge of all high-level springs in the Waianae Range is about 500,000 gallons of which about 81 percent issues from the dike complex.

Episodic sediment-discharge events in Cascade Springs, southern Black Hills, South Dakota

USGS Publications Warehouse

Hayes, Timothy Scott

1999-01-01

Cascade Springs is a group of artesian springs in the southern Black Hills, South Dakota, with collective flow of about 19.6 cubic feet per second. Beginning on February 28, 1992, a large discharge of red suspended sediment was observed from two of the six known discharge points. Similar events during 1906-07 and 1969 were documented by local residents and newspaper accounts. Mineralogic and grain-size analyses were performed to identify probable subsurface sources of the sediment. Geochemical modeling was performed to evaluate the geochemical evolution of water discharged from Cascade Springs. Interpretations of results provide a perspective on the role of artesian springs in the regional geohydrologic framework. X-ray diffraction mineralogic analyses of the clay fraction of the suspended sediment were compared to analyses of clay-fraction samples taken from nine geologic units at and stratigraphically below the spring-discharge points. Ongoing development of a subsurface breccia pipe(s) in the upper Minnelusa Formation and/or Opeche Shale was identified as a likely source of the suspended sediment; thus, exposed breccia pipes in lower Hell Canyon were examined. Upper Minnelusa Formation breccia pipes in lower Hell Canyon occur in clusters similar to the discrete discharge points of Cascade Springs. Grain-size analyses showed that breccia masses lack clay fractions and have coarser distributions than the wall rocks, which indicates that the red, fine-grained fractions have been carried out as suspended sediment. These findings support the hypothesis that many breccia pipes were formed as throats of abandoned artesian springs. Geochemical modeling was used to test whether geochemical evolution of ground water is consistent with this hypothesis. The evolution of water at Cascade Springs could not be suitably simulated using only upgradient water from the Minnelusa aquifer. A suitable model involved dissolution of anhydrite accompanied by dedolomitization in the upper Minnelusa Formation, which is caused by upward leakage of relatively fresh water from the Madison aquifer. The anhydrite dissolution and dedolomitization account for the net removal of minerals that would lead to breccia pipe formation by gravitational collapse. Breccia pipes in the lower Minnelusa Formation are uncommon; however, networks of interconnected breccia layers and breccia dikes are common. These networks, along with vertical fractures and faults, are likely pathways for transmitting upward leakage from the Madison aquifer. It is concluded that suspended sediment discharged at Cascade Springs probably results from episodic collapse brecciation that is caused by subsurface dissolution of anhydrite beds and cements of the upper Minnelusa Formation, accompanied by replacement of dolomite by calcite. It is further concluded that many breccia pipes probably are the throats of artesian springs that have been abandoned and exposed by erosion. The locations of artesian spring-discharge points probably have been shifting outwards from the center of the Black Hills uplift, essentially keeping pace with regional erosion over geologic time. Thus, artesian springflow probably is a factor in controlling water levels in the Madison and Minnelusa aquifers, with hydraulic head declining over geologic time, in response to development of new discharge points. Development of breccia pipes as throats of artesian springs would greatly enhance vertical hydraulic conductivity in the immediate vicinity of spring-discharge points. Horizontal hydraulic conductivity in the Minnelusa Formation also may be enhanced by dissolution processes related to upward leakage from the Madison aquifer. Potential processes could include dissolution resulting from leakage in the vicinity of breccia pipes that are abandoned spring throats, active spring discharge, development of subsurface breccias with no visible surface expression or spring discharge, as well as general areal leakage

Mutational Analysis of the TnrA-Binding Sites in the Bacillus subtilis nrgAB and gabP Promoter Regions

PubMed Central

Wray, Lewis V.; Zalieckas, Jill M.; Ferson, Amy E.; Fisher, Susan H.

1998-01-01

Transcription of the Bacillus subtilis nrgAB promoter is activated during nitrogen-limited growth by the TnrA protein. A common inverted repeat, TGTNAN7TNACA (TnrA site), is centered 49 to 51 bp upstream of the transcriptional start sites for the TnrA-regulated nrgAB, gabP P2, and nas promoters. Oligonucleotide-directed mutagenesis of the nrgAB promoter region showed that conserved nucleotides within the TnrA site, the A+T-rich region between the two TnrA half-sites, and an upstream A tract are all required for high-level activation of nrgAB expression. Mutations that alter the relative distance between the two half-sites of the nrgAB TnrA site abolish nitrogen regulation of nrgAB expression. Spacer mutations that change the relative distance between the TnrA site and −35 region of the nrgAB promoter reveal that activation of nrgAB expression occurs only when the TnrA site is located 49 to 51 bp upstream of the transcriptional start site. Mutational analysis of the conserved nucleotides in the gabP P2 TnrA site showed that this sequence is also required for nitrogen-regulated gabP P2 expression. The TnrA protein, expressed in an overproducing Escherichia coli strain, had a 625-fold-higher affinity for the wild-type nrgAB promoter DNA than for a mutated nrgAB promoter DNA fragment that is unable to activate nrgAB expression in vivo. These results indicate that the proposed TnrA site functions as the binding site for the TnrA protein. TnrA was found to activate nrgAB expression during late exponential growth in nutrient sporulation medium containing glucose, suggesting that cells become nitrogen limited during growth in this medium. PMID:9603886

Differential effects of two MRI contrast agents on the integrity and distribution of rAAV2 and rAAV5 in the rat striatum

PubMed Central

Osting, Sue; Bennett, Antonette; Power, Shelby; Wackett, Jordan; Hurley, Samuel A; Alexander, Andrew L; Agbandje-Mckena, Mavis; Burger, Corinna

2014-01-01

Intraoperative magnetic resonance imaging (MRI) has been proposed as a method to optimize intracerebral targeting and for tracking infusate distribution in gene therapy trials for nervous system disorders. We thus investigated possible effects of two MRI contrast agents, gadoteridol (Gd) and galbumin (Gab), on the distribution and levels of transgene expression in the rat striatum and their effect on integrity and stability of recombinant adeno-associated virus (rAAV) particles. MRI studies showed that contrast agent distribution did not predict rAAV distribution. However, green fluorescent protein (GFP) immunoreactivity revealed an increase in distribution of rAAV5-GFP, but not rAAV2-GFP, in the presence of Gd when compared with viral vector injected alone. In contrast, Gab increased the distribution of rAAV2-GFP not rAAV5-GFP. These observations pointed to a direct effect of infused contrast agent on the rAAV particles. Negative-stain electron microscopy (EM), DNAase treatment, and differential scanning calorimetry (DSC) were used to monitor rAAV2 and rAAV5 particle integrity and stability following contrast agent incubation. EMs of rAAV2-GFP and rAAV5-GFP particles pretreated with Gd appear morphologically similar to the untreated sample; however, Gab treatment resulted in surface morphology changes and aggregation. A compromise of particle integrity was suggested by sensitivity of the packaged genome to DNAase treatment following Gab incubation but not Gd for both vectors. However, neither agent significantly affected particle stability when analyzed by DSC. An increase in Tm was observed for AAV2 in lactated Ringer’s buffer. These results thus highlight potential interactions between MRI contrast agents and AAV that might affect vector distribution and stability, as well as the stabilizing effect of lactated Ringer’s solution on AAV2. PMID:26015943

Novel Large Sulfur Bacteria in the Metagenomes of Groundwater-Fed Chemosynthetic Microbial Mats in the Lake Huron Basin

PubMed Central

Sharrar, Allison M.; Flood, Beverly E.; Bailey, Jake V.; Jones, Daniel S.; Biddanda, Bopaiah A.; Ruberg, Steven A.; Marcus, Daniel N.; Dick, Gregory J.

2017-01-01

Little is known about large sulfur bacteria (LSB) that inhabit sulfidic groundwater seeps in large lakes. To examine how geochemically relevant microbial metabolisms are partitioned among community members, we conducted metagenomic analysis of a chemosynthetic microbial mat in the Isolated Sinkhole, which is in a deep, aphotic environment of Lake Huron. For comparison, we also analyzed a white mat in an artesian fountain that is fed by groundwater similar to Isolated Sinkhole, but that sits in shallow water and is exposed to sunlight. De novo assembly and binning of metagenomic data from these two communities yielded near complete genomes and revealed representatives of two families of LSB. The Isolated Sinkhole community was dominated by novel members of the Beggiatoaceae that are phylogenetically intermediate between known freshwater and marine groups. Several of these Beggiatoaceae had 16S rRNA genes that contained introns previously observed only in marine taxa. The Alpena fountain was dominated by populations closely related to Thiothrix lacustris and an SM1 euryarchaeon known to live symbiotically with Thiothrix spp. The SM1 genomic bin contained evidence of H2-based lithoautotrophy. Genomic bins of both the Thiothrix and Beggiatoaceae contained genes for sulfur oxidation via the rDsr pathway, H2 oxidation via Ni-Fe hydrogenases, and the use of O2 and nitrate as electron acceptors. Mats at both sites also contained Deltaproteobacteria with genes for dissimilatory sulfate reduction (sat, apr, and dsr) and hydrogen oxidation (Ni-Fe hydrogenases). Overall, the microbial mats at the two sites held low-diversity microbial communities, displayed evidence of coupled sulfur cycling, and did not differ largely in their metabolic potentials, despite the environmental differences. These results show that groundwater-fed communities in an artesian fountain and in submerged sinkholes of Lake Huron are a rich source of novel LSB, associated heterotrophic and sulfate-reducing bacteria, and archaea. PMID:28533768

Novel Large Sulfur Bacteria in the Metagenomes of Groundwater-Fed Chemosynthetic Microbial Mats in the Lake Huron Basin.

PubMed

Sharrar, Allison M; Flood, Beverly E; Bailey, Jake V; Jones, Daniel S; Biddanda, Bopaiah A; Ruberg, Steven A; Marcus, Daniel N; Dick, Gregory J

2017-01-01

Little is known about large sulfur bacteria (LSB) that inhabit sulfidic groundwater seeps in large lakes. To examine how geochemically relevant microbial metabolisms are partitioned among community members, we conducted metagenomic analysis of a chemosynthetic microbial mat in the Isolated Sinkhole, which is in a deep, aphotic environment of Lake Huron. For comparison, we also analyzed a white mat in an artesian fountain that is fed by groundwater similar to Isolated Sinkhole, but that sits in shallow water and is exposed to sunlight. De novo assembly and binning of metagenomic data from these two communities yielded near complete genomes and revealed representatives of two families of LSB. The Isolated Sinkhole community was dominated by novel members of the Beggiatoaceae that are phylogenetically intermediate between known freshwater and marine groups. Several of these Beggiatoaceae had 16S rRNA genes that contained introns previously observed only in marine taxa. The Alpena fountain was dominated by populations closely related to Thiothrix lacustris and an SM1 euryarchaeon known to live symbiotically with Thiothrix spp. The SM1 genomic bin contained evidence of H 2 -based lithoautotrophy. Genomic bins of both the Thiothrix and Beggiatoaceae contained genes for sulfur oxidation via the rDsr pathway, H 2 oxidation via Ni-Fe hydrogenases, and the use of O 2 and nitrate as electron acceptors. Mats at both sites also contained Deltaproteobacteria with genes for dissimilatory sulfate reduction ( sat, apr , and dsr ) and hydrogen oxidation (Ni-Fe hydrogenases). Overall, the microbial mats at the two sites held low-diversity microbial communities, displayed evidence of coupled sulfur cycling, and did not differ largely in their metabolic potentials, despite the environmental differences. These results show that groundwater-fed communities in an artesian fountain and in submerged sinkholes of Lake Huron are a rich source of novel LSB, associated heterotrophic and sulfate-reducing bacteria, and archaea.

Impact of the climate change to shallow groundwater in Baltic artesian basin

NASA Astrophysics Data System (ADS)

Lauva, D.; Bethers, P.; Timuhins, A.; Sennikovs, J.

2012-04-01

The purpose of our work was to find the long term pattern of annual shallow ground water changes in region of Latvia, ground water level modelling for the contemporary climate and future climate scenarios and the model generalization to the Baltic artesian basin (BAB) region. Latvia is located in the middle part of BAB. It occupies about 65'000 square kilometers. BAB territory (480'000 square kilometres) also includes Lithuania, Estonia as well as parts of Poland, Russia, Belarus and the Baltic Sea. Territory of BAB is more than seven times bigger than Latvia. Precipitation and spring snow melt are the main sources of the ground water recharge in BAB territory. The long term pattern of annual shallow ground water changes was extracted from the data of 25 monitoring wells in the territory of Latvia. The main Latvian groundwater level fluctuation regime can be described as a function with two maximums (in spring and late autumn) and two minimums (in winter and late summer). The mathematical model METUL (developed by Latvian University of Agriculture) was chosen for the ground water modelling. It was calibrated on the observations in 25 gauging wells around Latvia. After the calibration we made calculations using data provided by an ensemble of regional climate models, yielding a continuous groundwater table time-series from 1961 to 2100, which were analysed and split into 3 time windows for further analysis: contemporary climate (1961-1990), near future (2021-2050) and far future (2071-2100). The daily average temperature, precipitation and humidity time series were used as METUL forcing parameters. The statistical downscaling method (Sennikovs and Bethers, 2009) was applied for the bias correction of RCM calculated and measured variables. The qualitative differences in future and contemporary annual groundwater regime are expected. The future Latvian annual groundwater cycle according to the RCM climate projection changes to curve with one peak and one drought point. Acknowledgements. This research was supported by the European Social Fund project "Establishment of interdisciplinary scientist group and modelling system for groundwater research" (Project Nr. 2009/0212/1DP/1.1.1.2.0/09/APIA/VIAA/060). Regional climate model data was provided through the ENSEMBLES data archive, funded by the EU FP6 Integrated Project ENSEMBLES (Contract number 505539). Reference: Sennikovs, J., Bethers, U. 2009. Statistical downscaling method of regional climate model results for hydrological modelling. In: Proceedings of 18th World IMACS / MODSIM Congress.

Laboratory simulation of the effects of overburden stress on the specific storage of shallow artesian aquifers

USGS Publications Warehouse

Sepúlveda, Nicasio; Zack, A.L.; Krishna, J.H.; Quinones-Aponte, Vicente; Gomez-Gomez, Fernando; Morris, G.L.

1990-01-01

A laboratory experiment to measure the specific storage of an aquifer material was conducted. A known dead load, simulating an overburden load, was applied to a sample of completely saturated aquifer material contained inside a cylinder. After the dead load was applied, water was withdrawn from the sample, causing the hydrostatic pressure to decrease and the effective stress to increase. The resulting compression of the sample and the amount of water withdrawn were measured after equilibrium was reached. The procedure was repeated by increasing the dead load and the hydrostatic pressure followed by withdrawing water to determine new values of effective stress and compaction. The simulated dead loads are typical of those experienced by shallow artesian aquifers. The void ratio and the effective stress of the aquifer sample, as simulated by different dead loads, determine the pore volume compressibility which, in turn, determines the values of specific storage. An analytical algorithm was used to independently determine the stress dependent profile of specific storage. These values are found to be in close agreement with laboratory results. Implications for shallow artesian aquifers, with relatively small overburden stress, are also addressed.

gC1q-R/p32, a C1q-binding protein, is a receptor for the InlB invasion protein of Listeria monocytogenes.

PubMed

Braun, L; Ghebrehiwet, B; Cossart, P

2000-04-03

InlB is a Listeria monocytogenes protein that promotes entry of the bacterium into mammalian cells by stimulating tyrosine phosphorylation of the adaptor proteins Gab1, Cbl and Shc, and activation of phosphatidyl- inositol (PI) 3-kinase. Using affinity chromatography and enzyme-linked immunosorbent assay, we demonstrate a direct interaction between InlB and the mammalian protein gC1q-R, the receptor of the globular part of the complement component C1q. Soluble C1q or anti-gC1q-R antibodies impair InlB-mediated entry. Transient transfection of GPC16 cells, which are non-permissive to InlB-mediated entry, with a plasmid-expressing human gC1q-R promotes entry of InlB-coated beads. Furthermore, several experiments indicate that membrane recruitment and activation of PI 3-kinase involve an InlB-gC1q-R interaction and that gC1q-R associates with Gab1 upon stimulation of Vero cells with InlB. Thus, gC1q-R constitutes a cellular receptor involved in InlB-mediated activation of PI 3-kinase and tyrosine phosphorylation of the adaptor protein Gab1. After E-cadherin, the receptor for internalin, gC1q-R is the second identified mammalian receptor promoting entry of L. monocytogenes into mammalian cells.

[Biochip for determination of genetic markers of sporadic Alzheimer's disease in the Russian Slavic population].

PubMed

Nizamutdinov, I I; Andreeva, T V; Stepanov, V A; Marusin, A V; Rogaev, E I; Zasedatelev, A S; Nasedkina, T V

2013-01-01

A biological microchip (biochip) for the genetic predis- position to sporadic form of Alzheimer's disease studying has been developed. The biochip allows determina- tion of ten genetic polymorphisms within APOE, TOMM40, APOJ, EXOC3L2, GAB2, A2M, CR1, BIN1 and PICALM genes. The genotyping assay includes the amplification of loci of interest and further allele-specific hybridization of the fluorescent labeled amplicons with oligonucleotides immobilized on a biochip. Based on the results of genotyping of 166 patients and 128 controls APOE epsilon4 allele was found to be significantly associated with Alzheimer's disease susceptibility (OR = 2.275, 95% CI = 1.045-4.954,p = 0.034). Additionally, protective effects for the APOE epsilon2 allele and CLUT-allele (rs11136000) were observed (OR = 0.215, 95% CI = 0.090-0.516, p = 0.001 and OR = 0.679, 95% CI = 0.47-0.99, p = 0.042, respectively). Gene-gene interaction revealed two genotype combinations associated with Alzheimer's disease: APOE E3/E4 GAB2 G/G (OR = 2.49; CI = 1.43-4.32, p = 0.001) and APOE epsilon4 GAB2 G/G (OR = 3.55, CI = 1.23-10.24,p = 0.015). Based on the results of the combined multivariate analysis the algorithm for identifying of individuals at increased risk of Alzheimer's disease was developed.

Enhanced absorption of TM waves in conductive nanoparticles structure

NASA Astrophysics Data System (ADS)

Mousa, H. M.; Shabat, M. M.; Ouda, A. K.; Schaadt, D. M.

2018-05-01

This paper tackles anti-reflection coating structure for silicon solar cell where conductive nanoparticle (CNP) film is sandwiched between a semi-infinite glass cover and a semi-infinite silicon substrate. The transmission and reflection coefficients are derived by the transfer matrix method and simulated for values of unit cell sizes, gab widths in visible and near-infrared radiation. We also illustrated the dependence of the absorption, transmission and reflection coefficients on several angles of incidence of the transverse magnetic polarized (TM) waves. We found out that reflection decreases by the increase of incident angle to 50∘. If nanoparticles are suitably located and sized at gab width of 3.5 nm, unit cell of 250 nm and CNP layer thickness of 150 nm, the absorptivity of the structure achieves 100%.

A progress report on results of test drilling and ground-water investigations of the Snake Plain aquifer, southeastern Idaho: Part 1: Mud Lake Region, 1969-70 and Part 2: Observation Wells South of Arco and West of Aberdeen

USGS Publications Warehouse

Crosthwaite, E.G.

1973-01-01

The results of drilling test holes to depths of approximately 1,000 feet in the Mud Lake region show that a large part of the region is underlain by both sedimentary deposits and basalt flows. At some locations, predominantly sedimentary deposits were penetrated; at others, basalt flows predominated. The so-called Mud Lake-Market Lake barrier denotes a change in geology. From the vicinity of the barrier area, as described by Stearns, Crandall, and Steward (1938, p. 111), up the water-table gradient for at least a few tens of miles, the saturated geologic section consists predominantly of beds of sediments that are intercalated with numerous basalt flows. Downgradient from the barrier, sedimentary deposits are not common and practically all the water-bearing formations are basalt, at least to the depths explored so far. Thus, the barrier is a transition zone from a sedimentary-basaltic sequence to a basaltic sequence. The sedimentary-basaltic sequence forms a complex hydrologic system in which water occurs under water-table conditions in the upper few tens of feet of saturated material and under artesian conditions in the deeper material in the southwest part of the region. The well data indicate that southwest of the barrier, artesian pressures are not significant. Southwest of the barrier, few sedimentary deposits occur in the basalt section and, as described by Mundorff, Crosthwaite, and Kilburn (1964). ground water occurs in a manner typical of the Snake Plain aquifer. In several wells, artesian pressures are higher in the deeper formations than in the shallower ones, but the reverse was found in a few wells. The available data are not adequate to describe the water-bearing characteristics of the artesian aquifer nor the effects that pumping in one zone would have on adjacent zones. The water-table aquifer yields large quantities of water to irrigation wells.

Changes in species composition of water insects during 25-year monitoring of the Danube floodplains affected by the Gabčíkovo waterworks.

PubMed

Krno, Iľja; Beracko, Pavel; Navara, Tomáš; Šporka, Ferdinand; Mišíková Elexová, Emília

2018-06-20

This study was based on the complex environmental monitoring of the Danube River in Slovakia. Out of 23 monitored sites, three were chosen for the aim of this study. The three sites were sampled regularly three times per year during a 25-year period, which started in 1990, 2 years before the Gabčíkovo waterworks became operational. Each site represented one of the main potamal types, which we recognised according to the habitat characteristics as eupotamal, parapotamal and plesiopotamal. In order to assess changes which occurred during the 25 years, we studied taxocoenoses of Ephemeroptera, Plecoptera and Trichoptera, which sensitively reflect anthropogenic impacts. The changes caused by the Gabčíkovo waterworks manifested in a decrease of the species diversity in eupotamal because of the disappearance of rheophilous taxa. In the parapotamal and plesiopotamal sites, the initial decrease was followed by a partial recovery of biodiversity due to the artificial floodings. After they were stopped, the decrease occurred again and until 2015, the insect taxa became rare. Conversely, in the eupotamal site, there was an increasing trend in biodiversity since 2011 until 2015. Overall increase in the floodplain index values indicated a loss of connectivity between the floodplain habitats and their fauna with the main channel during the last 25 years. In this paper, we also extended the floodplain index with data on habitat values and indication weight for several stonefly species.

Regional hydrology of the Dixie Valley geothermal field, Nevada: preliminary interpretations of chemical and isotopic data

USGS Publications Warehouse

Nimz, Gregory; Janik, Cathy; Goff, Fraser; Dunlap, Charles; Huebner, Mark; Counce, Dale; Johnson, Stuart D.

1999-01-01

Chemical and isotopic analyses of Dixie Valley regional waters indicated several distinct groups ranging in recharge age from Pleistocene (1000a). Geothermal field fluids (~12-14 ka) appear derived from water similar in composition to non thermal groundwater observed today in valley artesian well (also ~14 ka). Geothermal fluid interaction with mafic rocks (Humboldt Lopolith) appears to be common, and significant reaction with granodiorite may also occur. Despite widespread occurrence of carbonate rocks, large scale chemical interaction appears minor. Age asymmetry of the range, more extensive interaction with deep seated waters in the west, and distribution of springs and artesian wells suggest the existence of a regional upward hydrologic gradient with an axis in proximity to the Stillwater range.

Design and evaluation of foamed asphalt base materials.

DOT National Transportation Integrated Search

2013-05-01

Foamed asphalt stabilized base (FASB) combines reclaimed asphalt pavement (RAP), recycled : concrete (RC), and/or graded aggregate base (GAB) with a foamed asphalt binder to produce a : partially stabilized base material. The objectives of this study...

Design and evaluation of foamed asphalt base materials : [research summary].

DOT National Transportation Integrated Search

2013-05-01

Foamed asphalt stabilized base (FASB) combines reclaimed asphalt pavement (RAP), : recycled concrete (RC), and/or graded aggregate base (GAB) with a foamed asphalt : binder to produce a partially stabilized base material. Although widely used, most :...

On the "hidden" phytoplankton blooms on Australia's southern shelves

NASA Astrophysics Data System (ADS)

Kämpf, Jochen; Kavi, Ankit

2017-02-01

Phytoplankton blooms on Australia's southern shelves are revisited using satellite-derived monthly data of chlorophyll a concentrations for the period 2003-2015. It is known that the region hosts a seasonal coastal upwelling system that develops in austral summer (January-March) with chlorophyll a concentrations of >2 mg/m3. While this summer upwelling is spatially limited to a few hot spots, here we show that widespread phytoplankton blooms of moderate ( 1 mg/m3) chlorophyll a concentrations develop during autumn and early winter on most of Australia's extensive southern shelves—from the vast shelves of the Great Australian Bight (GAB) in the west to Bass Strait in the east. This surprising finding disproves the widespread belief that shelf waters of the GAB are generally oligotrophic and may explain the relatively high abundance of both forage fish (sardines) and upper trophic-level predators (e.g., tuna and whales) in the region.

Spatiotemporal modelling of groundwater extraction in semi-arid central Queensland, Australia

NASA Astrophysics Data System (ADS)

Keir, Greg; Bulovic, Nevenka; McIntyre, Neil

2016-04-01

The semi-arid Surat Basin in central Queensland, Australia, forms part of the Great Artesian Basin, a groundwater resource of national significance. While this area relies heavily on groundwater supply bores to sustain agricultural industries and rural life in general, measurement of groundwater extraction rates is very limited. Consequently, regional groundwater extraction rates are not well known, which may have implications for regional numerical groundwater modelling. However, flows from a small number of bores are metered, and less precise anecdotal estimates of extraction are increasingly available. There is also an increasing number of other spatiotemporal datasets which may help predict extraction rates (e.g. rainfall, temperature, soils, stocking rates etc.). These can be used to construct spatial multivariate regression models to estimate extraction. The data exhibit complicated statistical features, such as zero-valued observations, non-Gaussianity, and non-stationarity, which limit the use of many classical estimation techniques, such as kriging. As well, water extraction histories may exhibit temporal autocorrelation. To account for these features, we employ a separable space-time model to predict bore extraction rates using the R-INLA package for computationally efficient Bayesian inference. A joint approach is used to model both the probability (using a binomial likelihood) and magnitude (using a gamma likelihood) of extraction. The correlation between extraction rates in space and time is modelled using a Gaussian Markov Random Field (GMRF) with a Matérn spatial covariance function which can evolve over time according to an autoregressive model. To reduce computational burden, we allow the GMRF to be evaluated at a relatively coarse temporal resolution, while still allowing predictions to be made at arbitrarily small time scales. We describe the process of model selection and inference using an information criterion approach, and present some preliminary results from the study area. We conclude by discussing issues related with upscaling of the modelling approach to the entire basin, including merging of extraction rate observations with different precision, temporal resolution, and even potentially different likelihoods.

High arsenic groundwater in the Guide basin, northwestern China: Distribution and genesis mechanisms.

PubMed

Wang, Zhen; Guo, Huaming; Xiu, Wei; Wang, Jiao; Shen, Mengmeng

2018-05-30

High arsenic (As) groundwater has been found in Pliocene confined aquifers at depths from 100 to 300 m of the Guide basin, but little is known on the main hydrogeochemical processes leading to its elevated concentrations. Ninety-seven water samples and fifty-three sediment samples were collected for chemical and/or isotopic analysis. Concentrations of As in groundwater of confined aquifer range from 9.9 to 377 μg/L (average 109 μg/L), which generally show a sharply increasing trend along with NH 4 + , HCO 3 - , CO 3 2- and TOC along the inferred flow path, while NO 3 - , SO 4 2- /Cl - and redox potential (Eh) have decreasing trends. Results of sequential extraction show that As bound to amorphous and crystalline Fe oxide minerals are the main As forms, accounting for around 50% of total As in sediments. Reductive dissolution of As-bearing Fe(III) oxide minerals under reducing conditions in confined aquifers lead to the mobilization of As in groundwater. In addition, alkaline environment and high concentrations of HCO 3 - and CO 3 2- may make contributions to As enrichment in groundwater. High As groundwater in confined aquifer continuously flows out on the ground surface through tens of artesian wells, which may potentially contaminate low As groundwater in unconfined aquifer. Thus, further investigation is needed to evaluate long-term variations of water chemistry of low As groundwater and assess vulnerability of unconfined aquifer to As contamination. Copyright © 2018 Elsevier B.V. All rights reserved.

Performance evaluation of a ground-source heat pump system utilizing a flowing well and estimation of suitable areas for its installation in Aizu Basin, Japan

NASA Astrophysics Data System (ADS)

Shrestha, Gaurav; Uchida, Youhei; Kuronuma, Satoru; Yamaya, Mutsumi; Katsuragi, Masahiko; Kaneko, Shohei; Shibasaki, Naoaki; Yoshioka, Mayumi

2017-08-01

Development of a ground-source heat pump (GSHP) system with higher efficiency, and evaluation of its operating performance, is essential to expand the growth of GSHP systems in Japan. A closed-loop GSHP system was constructed utilizing a flowing (artesian) well as a ground heat exchanger (GHE). The system was demonstrated for space-heating and space-cooling of a room (area 126.7 m2) in an office building. The average coefficient of performance was found to be 4.5 for space-heating and 8.1 for space-cooling. The maximum heat exchange rate was 70.8 W/m for space-heating and 57.6 W/m for space-cooling. From these results, it was determined that a GSHP system with a flowing well as a GHE can result in higher performance. With this kind of highly efficient system, energy saving and cost reduction can be expected. In order to assess appropriate locations for the installation of similar kinds of GSHP systems in Aizu Basin, a suitability map showing the distribution of groundwater up-flowing areas was prepared based on the results of a regional-scale three-dimensional analytical model. Groundwater up-flowing areas are considered to be suitable because the flowing well can be constructed at these areas. Performance evaluation of the GSHP system utilizing the flowing well, in conjunction with the prepared suitability map for its installation, can assist in the promotion of GSHP systems in Japan.

Geology of the Volga-Ural petroleum province and detailed description of the Ramashkino and Arlan oil fields

USGS Publications Warehouse

Peterson, James A.; Clarke, James W.

1983-01-01

The Volga-Ural petroleum province is in general coincident with the Volga-Ural regional high, a broad upwarp of the east-central part of the Russian (East European) platform. The central part of the province is occupied by the Tatar arch, which contains the major share of the oil fields of the province. The Perm-Bashkir arch forms the northeastern part of the regional high, and the Zhigulevsko-Orenburg arch makes up the southern part. These arches are separated from one another by elongate downwarps. The platform cover overlies an Archean crystalline basement and consists of seven main sedimentation cycles as follows: 1) Riphean (lower Bavly) continental sandstone, shale, and conglomerate beds from 500 to 5,000 m thick deposited in aulacogens. 2) Vendian (upper Bavly) continental and marine shale and sandstone up to 3,000 m thick. 3) Middle Devonian-Tournaisian transgressive deposits, which are sandstone, siltstone, and shale in the lower part and carbonates with abundant reefs in the upper; thickness is 300-1,000 m. In the upper carbonate part is the Kamsko-Kinel trough system, which consists of narrow interconnected deep-water troughs. 4) The Visean-Namurian-Bashkirian cycle, which began with deposition of Visean clastics that draped over reefs of the previous cycle and filled in an erosional relief that had formed in some places on the sediments of the previous cycle. The Visean clastics are overlain by marine carbonates. Thickness of the cycle is 50-800 m. 5) Early Moscovian-Early Permian terrigenous clastic deposits and marine carbonate beds 1,000-3,000 m thick. 6) The late Early Permian-Late Permian cycle, which reflects maximum growth of the Ural Mountains and associated Ural foredeep. Evaporites were first deposited, then marine limestones and dolomites, which intertongue eastward with clastic sediments from the Ural Mountains. 7) Continental redbeds of Triassic age and mixed continental and marine elastic beds of Jurassic and Cretaceous age, which were deposited on the southern, southwestern, and northern margins of the Russian platform; they are generally absent in the Volga-Ural province, however. The Volga-Ural oil and gas basin is a single artesian system that contains seven aquifers separated by seals. The areas of greatest hydraulic head are in the eastern parts of the basin near areas where the aquifers crop out on the western slopes of the Ural Mountains. The Peri-Caspian basin is the principal drainage area of the artesian system. Approximately 600 oil and gas fields and 2,000 pools have been found in the Volga-Ural province. Nine productive sequences are recognized as follows: 1) Upper Proterozoic (Bavly beds), which are promising but not yet commercial. 2) Clastic Devonian, which contains the major reserves and includes the main pays of the super-giant Romashkino field. 3) Carbonate Upper Devonian and lowermost Carboniferous, which is one of the main reef-bearing intervals. 4) Visean (Lower Carboniferous) elastics, which are the main pays in the super-giant Arian field. 5) Carbonate Lower and Middle Carboniferous. 6) Clastic Middle Carboniferous Moscovian. 7) Carbonate Middle and Upper Carboniferous. 8) Carbonate-evaporite Lower Permian, which contains the major gas reserves and the lower part of the Melekess tar deposits. 9) Clastic-carbonate Upper Permian, which contains the major part of the Melekess tar deposits. The Volga-Ural province is divided into several productive regions on a basis of differences in structure, distribution of reservoir and source-rock facies, and general composition of the petroleum accumulations. These regions are the Tatar arch, Birsk saddle, Upper Kama depression, Perm-Bashkir arch, Ufa-Orenburg monocline, Melekess-Sernovodsko-Abdulino basin, Zhligulevsko-Orenburg arch, Ural foredeep, and north borders of the Peri-Casplan depression. Exploration activity has declined in recent years; however, interest remains high in several parts of the province, particula

Moisture Sorption-desorption Characteristics and the Corresponding Thermodynamic Properties of Carvedilol Phosphate.

PubMed

Allada, Ravikiran; Maruthapillai, Arthanareeswari; Palanisamy, Kamaraj; Chappa, Praveen

2017-01-01

Carvedilol phosphate (CDP) is a nonselective beta-blocker used for the treatment of heart failures and hypertension. In this work, moisture sorption-desorption characteristics and thermodynamic properties of CDP have been investigated. The isotherms were determined using dynamic vapor sorption analyzer at different humidity conditions (0%-90% relative humidity) and three pharmaceutically relevant temperatures (20°C, 30°C, and 40°C). The experimental sorption data determined were fitted to various models, namely, Brunauer-Emmett-Teller; Guggenheim-Anderson-De Boer (GAB); Peleg; and modified GAB. Isosteric heats of sorption were evaluated through the direct use of sorption isotherms by means of the Clausius-Clapeyron equation. The sorption model parameters were determined from the experimental sorption data using nonlinear regression analysis, and mean relative percentage deviation (P), correlation (Correl), root mean square error, and model efficiency were considered as the criteria to select the best fit model. The sorption-desorption isotherms have sigmoidal shape - confirming to Type II isotherms. Based on the statistical data analysis, modified GAB model was found to be more adequate to explain sorption characteristics of CDP. It is noted that the rate of adsorption and desorption is specific to the temperature at which it was being studied. It is observed that isosteric heat of sorption decreased with increasing equilibrium moisture content. The calculation of the thermodynamic properties was further used to draw an understanding of the properties of water and energy requirements associated with the sorption behavior. The sorption-desorption data and the set of equations are useful in the simulation of processing, handling, and storage of CDP and further behavior during manufacture and storage of CDP formulations.

Targets of B-cell antigen receptor signaling: the phosphatidylinositol 3-kinase/Akt/glycogen synthase kinase-3 signaling pathway and the Rap1 GTPase.

PubMed

Gold, M R; Ingham, R J; McLeod, S J; Christian, S L; Scheid, M P; Duronio, V; Santos, L; Matsuuchi, L

2000-08-01

In this review, we discuss the role of phosphatidylinositol 3-kinase (PI3K) and Rap 1 in B-cell receptor (BCR) signaling. PI3K produces lipids that recruit pleckstrin homology domain-containing proteins to the plasma membrane. Akt is a kinase that the BCR activates in this manner. Akt phosphorylates several transcription factors as well as proteins that regulate apoptosis and protein synthesis. Akt also regulates glycogen synthase kinase-3, a kinase whose substrates include the nuclear factor of activated T cells (NF-AT)cl and beta-catenin transcriptional activators. In addition to Akt, PI3K-derived lipids also regulate the activity and localization of other targets of BCR signaling. Thus, a key event in BCR signaling is the recruitment of PI3K to the plasma membrane where its substrates are located. This is mediated by binding of the Src homology (SH) 2 domains in PI3K to phosphotyrosine-containing sequences on membrane-associated docking proteins. The docking proteins that the BCR uses to recruit PI3K include CD19, Cbl, Gab1, and perhaps Gab2. We have shown that Gab1 colocalizes PI3K with SH2 domain-containing inositol phosphatase (SHIP) and SHP2, two enzymes that regulate PI3K-dependent signaling. In contrast to PI3K, little is known about the Rap1 GTPase. We showed that the BCR activates Rap1 via phospholipase C-dependent production of diacylglycerol. Since Rap1 is thought to regulate cell adhesion and cell polarity, it may be involved in B-cell migration.

Uniformity under in vitro conditions: Changes in the phenotype of cancer cell lines derived from different medulloblastoma subgroups.

PubMed

Chlapek, Petr; Zitterbart, Karel; Kren, Leos; Filipova, Lenka; Sterba, Jaroslav; Veselska, Renata

2017-01-01

Medulloblastoma comprises four main subgroups (WNT, SHH, Group 3 and Group 4) originally defined by transcriptional profiling. In primary medulloblastoma tissues, these groups are thought to be distinguishable using the immunohistochemical detection of β-catenin, filamin A, GAB1 and YAP1 protein markers. To investigate the utility of these markers for in vitro studies using medulloblastoma cell lines, immunoblotting and indirect immunofluorescence were employed for the detection of β-catenin, filamin A, GAB1 and YAP1 in both DAOY and D283 Med reference cell lines and the panel of six medulloblastoma cell lines derived in our laboratory from the primary tumor tissues of known molecular subgroups. Immunohistochemical detection of these markers was performed on formalin-fixed paraffin-embedded tissue of the matching primary tumors. The results revealed substantial divergences between the primary tumor tissues and matching cell lines in the immunoreactivity pattern of medulloblastoma-subgroup-specific protein markers. Regardless of the molecular subgroup of the primary tumor, all six patient-derived medulloblastoma cell lines exhibited a uniform phenotype: immunofluorescence showed the nuclear localization of YAP1, accompanied by strong cytoplasmic positivity for β-catenin and filamin A, as well as weak positivity for GAB1. The same immunoreactivity pattern was also found in both DAOY and D283 Med reference medulloblastoma cell lines. Therefore, we can conclude that various medulloblastoma cell lines tend to exhibit the same characteristics of protein marker expression under standard in vitro conditions. Such a finding emphasizes the importance of the analyses of primary tumors in clinically oriented medulloblastoma research and the urgent need to develop in vitro models of improved clinical relevance, such as 3D cultures and organotypic slice cultures.

NaCl - Changes stem morphology, anatomy and phloem structure in Lucerne (Medicago sativa cv. Gabès): Comparison of upper and lower internodes.

PubMed

Nja, Riheb Ben; Merceron, Bruno; Faucher, Mireille; Fleurat-Lessard, Pierrette; Béré, Emile

2018-02-01

In M. sativa cv. Gabès plants treated with 150mM NaCl, the height of the stem is decreased and the internode number, length and diameter are reduced. This depressive effect on growth, but also on photosynthetic activity and water balance, is accompanied by structural changes. In the upper internodes, NaCl treatment increases cambium development, so that the vascular ring is initiated earlier than in controls. In the lower internodes, the number of lignified phloem fibers is increased by NaCl, and their wall thickness is augmented, compared to controls; in the phloem complex, the nacreous layer is enlarged, the number of internal wall ingrowths is increased, but companion cells are damaged. In the treated lower internodes, few vessels occur in the secondary xylem, which is by contrast rich in lignified fibers and in wide vessels grouped in the metaxylem area; protoxylem parenchyma and adjacent pith are also lignified. In addition, in treated lower internodes, starch grains are less abundant than in controls, and this variation might be related to the decrease of photosynthesis. When taken together, qualitative and quantitative results indicate that the saline stress has a marked morpho-anatomical impact on the M. sativa Gabès stem. In particular, variations of secondary derivative distribution, increased wall thickening, lignification of phloem and xylem fibers and damage in the phloem complex are NaCl-induced responses, and are more expressed in the lower than in the upper internodes. The reinforcement of the stem lignified vasculature is thus a positive response to stress, but it has a negative impact on the quality of the forage. Copyright © 2017 Elsevier Ltd. All rights reserved.

Evidence for a Contribution of ALA Synthesis to Plastid-To-Nucleus Signaling

PubMed Central

Czarnecki, Olaf; Gläßer, Christine; Chen, Jin-Gui; Mayer, Klaus F. X.; Grimm, Bernhard

2012-01-01

The formation of 5-aminolevulinic acid (ALA) in tetrapyrrole biosynthesis is widely controlled by environmental and metabolic feedback cues that determine the influx into the entire metabolic path. Because of its central role as the rate-limiting step, we hypothesized a potential role of ALA biosynthesis in tetrapyrrole-mediated retrograde signaling and exploited the direct impact of ALA biosynthesis on nuclear gene expression (NGE) by using two different approaches. Firstly, the Arabidopsis gun1, hy1 (gun2), hy2 (gun3), gun4 mutants showing uncoupled NGE from the physiological state of chloroplasts were thoroughly examined for regulatory modifications of ALA synthesis and transcriptional control in the nucleus. We found that reduced ALA-synthesizing capacity is common to analyzed gun mutants. Inhibition of ALA synthesis by gabaculine (GAB) that inactivates glutamate-1-semialdehyde aminotransferase and ALA feeding of wild-type and mutant seedlings corroborate the expression data of gun mutants. Transcript level of photosynthetic marker genes were enhanced in norflurazon (NF)-treated seedlings upon additional GAB treatment, while enhanced ALA amounts diminish these RNA levels in NF-treated wild-type in comparison to the solely NF-treated seedlings. Secondly, the impact of posttranslationally down-regulated ALA synthesis on NGE was investigated by global transcriptome analysis of GAB-treated Arabidopsis seedlings and the gun4-1 mutant, which is also characterized by reduced ALA formation. A common set of significantly modulated genes was identified indicating ALA synthesis as a potential signal emitter. The over-represented gene ontology categories of genes with decreased or increased transcript abundance highlight a few biological processes and cellular functions, which are remarkably affected in response to plastid-localized ALA biosynthesis. These results support the hypothesis that ALA biosynthesis correlates with retrograde signaling-mediated control of NGE. PMID:23112801

Moisture Sorption–desorption Characteristics and the Corresponding Thermodynamic Properties of Carvedilol Phosphate

PubMed Central

Allada, Ravikiran; Maruthapillai, Arthanareeswari; Palanisamy, Kamaraj; Chappa, Praveen

2017-01-01

Aims: Carvedilol phosphate (CDP) is a nonselective beta-blocker used for the treatment of heart failures and hypertension. In this work, moisture sorption–desorption characteristics and thermodynamic properties of CDP have been investigated. Materials and Methods: The isotherms were determined using dynamic vapor sorption analyzer at different humidity conditions (0%–90% relative humidity) and three pharmaceutically relevant temperatures (20°C, 30°C, and 40°C). The experimental sorption data determined were fitted to various models, namely, Brunauer–Emmett–Teller; Guggenheim-Anderson-De Boer (GAB); Peleg; and modified GAB. Isosteric heats of sorption were evaluated through the direct use of sorption isotherms by means of the Clausius-Clapeyron equation. Statistical Analysis Used: The sorption model parameters were determined from the experimental sorption data using nonlinear regression analysis, and mean relative percentage deviation (P), correlation (Correl), root mean square error, and model efficiency were considered as the criteria to select the best fit model. Results: The sorption–desorption isotherms have sigmoidal shape – confirming to Type II isotherms. Based on the statistical data analysis, modified GAB model was found to be more adequate to explain sorption characteristics of CDP. It is noted that the rate of adsorption and desorption is specific to the temperature at which it was being studied. It is observed that isosteric heat of sorption decreased with increasing equilibrium moisture content. Conclusions: The calculation of the thermodynamic properties was further used to draw an understanding of the properties of water and energy requirements associated with the sorption behavior. The sorption–desorption data and the set of equations are useful in the simulation of processing, handling, and storage of CDP and further behavior during manufacture and storage of CDP formulations. PMID:28584488

Two new species of Macrobothridium (Cestoda: Diphyllidea) from rhinobatid elasmobranchs in the Gulf of Gabès, Tunisia, with notes on the status of the genus.

PubMed

Neifar, L; Tyler, G A; Euzet, L

2001-06-01

As a result of an investigation of metazoan parasites of elasmobranch fishes in the Gulf of Gabès, Tunisia, we discovered 2 new species of diphyllidean cestodes. Macrobothridium euterpes n. sp. is described from the spiral intestine of Rhinobatos rhinobatos, and Macrobothridium syrtensis n. sp. from the spiral intestine of Rhinobatos cemiculus. Macrobothridium euterpes is distinguished from the only other species in the genus (Macrobothridium rhynchobati) by the number of rostellar hooks, size, genital pore position, vagina position, and ovary shape. Macrobothridium syrtensis is distinguished from M. rhynchobati by the hook morphology, testis number, and overall size, and from M. euterpes by the number of rostellar hooks, testis number, genital pore position, vagina position, and ovary shape. These are the first 2 species added to the genus since its establishment in 1989. A standardized formula for representing the number and arrangement of rostellar hooks in diphyllidean species is presented.

Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects

PubMed Central

Kole, Chittaranjan; Muthamilarasan, Mehanathan; Henry, Robert; Edwards, David; Sharma, Rishu; Abberton, Michael; Batley, Jacqueline; Bentley, Alison; Blakeney, Michael; Bryant, John; Cai, Hongwei; Cakir, Mehmet; Cseke, Leland J.; Cockram, James; de Oliveira, Antonio Costa; De Pace, Ciro; Dempewolf, Hannes; Ellison, Shelby; Gepts, Paul; Greenland, Andy; Hall, Anthony; Hori, Kiyosumi; Hughes, Stephen; Humphreys, Mike W.; Iorizzo, Massimo; Ismail, Abdelbagi M.; Marshall, Athole; Mayes, Sean; Nguyen, Henry T.; Ogbonnaya, Francis C.; Ortiz, Rodomiro; Paterson, Andrew H.; Simon, Philipp W.; Tohme, Joe; Tuberosa, Roberto; Valliyodan, Babu; Varshney, Rajeev K.; Wullschleger, Stan D.; Yano, Masahiro; Prasad, Manoj

2015-01-01

Climate change affects agricultural productivity worldwide. Increased prices of food commodities are the initial indication of drastic edible yield loss, which is expected to increase further due to global warming. This situation has compelled plant scientists to develop climate change-resilient crops, which can withstand broad-spectrum stresses such as drought, heat, cold, salinity, flood, submergence and pests, thus helping to deliver increased productivity. Genomics appears to be a promising tool for deciphering the stress responsiveness of crop species with adaptation traits or in wild relatives toward identifying underlying genes, alleles or quantitative trait loci. Molecular breeding approaches have proven helpful in enhancing the stress adaptation of crop plants, and recent advances in high-throughput sequencing and phenotyping platforms have transformed molecular breeding to genomics-assisted breeding (GAB). In view of this, the present review elaborates the progress and prospects of GAB for improving climate change resilience in crops, which is likely to play an ever increasing role in the effort to ensure global food security. PMID:26322050

Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects.

PubMed

Kole, Chittaranjan; Muthamilarasan, Mehanathan; Henry, Robert; Edwards, David; Sharma, Rishu; Abberton, Michael; Batley, Jacqueline; Bentley, Alison; Blakeney, Michael; Bryant, John; Cai, Hongwei; Cakir, Mehmet; Cseke, Leland J; Cockram, James; de Oliveira, Antonio Costa; De Pace, Ciro; Dempewolf, Hannes; Ellison, Shelby; Gepts, Paul; Greenland, Andy; Hall, Anthony; Hori, Kiyosumi; Hughes, Stephen; Humphreys, Mike W; Iorizzo, Massimo; Ismail, Abdelbagi M; Marshall, Athole; Mayes, Sean; Nguyen, Henry T; Ogbonnaya, Francis C; Ortiz, Rodomiro; Paterson, Andrew H; Simon, Philipp W; Tohme, Joe; Tuberosa, Roberto; Valliyodan, Babu; Varshney, Rajeev K; Wullschleger, Stan D; Yano, Masahiro; Prasad, Manoj

2015-01-01

Climate change affects agricultural productivity worldwide. Increased prices of food commodities are the initial indication of drastic edible yield loss, which is expected to increase further due to global warming. This situation has compelled plant scientists to develop climate change-resilient crops, which can withstand broad-spectrum stresses such as drought, heat, cold, salinity, flood, submergence and pests, thus helping to deliver increased productivity. Genomics appears to be a promising tool for deciphering the stress responsiveness of crop species with adaptation traits or in wild relatives toward identifying underlying genes, alleles or quantitative trait loci. Molecular breeding approaches have proven helpful in enhancing the stress adaptation of crop plants, and recent advances in high-throughput sequencing and phenotyping platforms have transformed molecular breeding to genomics-assisted breeding (GAB). In view of this, the present review elaborates the progress and prospects of GAB for improving climate change resilience in crops, which is likely to play an ever increasing role in the effort to ensure global food security.

Interactions between non-native armored suckermouth catfish (Loricariidae: Pterygoplichthys) and native Florida manatee (Trichechus manatus latirostris) in artesian springs

USGS Publications Warehouse

Nico, Leo G.; Loftus, William F.; Reid, James P.

2009-01-01

Non-native suckermouth armored catfishes (Loricariidae) of the genus Pterygoplichthys are now common throughout much of peninsular Florida. In this paper, we present preliminary observations on interactions between a Pterygoplichthys species, tentatively identified as P. disjunctivus (Weber, 1991), and endangered native Florida manatees, Trichechus manatus latirostris (Harlan, 1824), in artesian spring systems in Florida's St. Johns River drainage. The introduced catfish have become abundant in spring habitats, sites used by manatees as winter thermal refuges. In the spring runs, Pterygoplichthys regularly attaches to manatees and grazes the epibiota on their skin. On occasion, dozens of Pterygoplichthys congregate on individual manatees. Manatee responses varied widely; some did not react visibly to attached catfish whereas others appeared agitated and attempted to dislodge the fish. The costs and/or benefits of this interaction to manatees remain unclear.

Benthic response to water quality and biotic pressures in lower south San Francisco Bay, Alviso Slough, and Coyote Creek

USGS Publications Warehouse

Parchaso, Francis; Thompson, Janet K.; Crauder, Jeff S.; Anduaga, Rosa I.; Pearson, Sarah A.

2015-12-22

Bivalve biomass is elevated in summer and fall relative to the spring and winter except in Artesian Slough, where bivalves did not establish a signifcant presence. Presence of certain species contributes to the prey value of the community to predators. Potamocorbula amurensis is a shallow-burrowing bivalve and hence is easy prey for bottom-feeding predators. In contrast, Macoma petalum is a deposit feeder and can burrow deeper into the substrate than Potamocorbula amurensis, making it harder to be preyed upon. The quantitative importance of such predator-prey relationships on phytoplankton dynamics requires further investigation. There were also more amphipods in the sloughs in March 2014; this group is another potential contributor to the benthic-pelagic biomass balance. There is no observed reason for Artesian Slough to have low bivalve biomass values and high amphipod abundances. 

Modelling the effect of buried valleys on groundwater flow: case study in Ventspils vicinity, Latvia

NASA Astrophysics Data System (ADS)

Delina, Aija; Popovs, Konrads; Bikse, Janis; Retike, Inga; Babre, Alise; Kalvane, Gunta

2015-04-01

Buried subglacial valleys are widely distributed in glaciated regions and they can have great influence on groundwater flow and hence on groundwater resources. The aim of this study is to evaluate the effect of the buried valleys on groundwater flow in a confined aquifer (Middle Devonian Eifelian stage Arukila aquifer, D2ar) applying numerical modelling. The study area is located at vicinity of Ventspils Town, near wellfield Ogsils where number of the buried valleys with different depth and filling material are present. Area is located close to the Baltic Sea at Piejūra lowland Rinda plain and regional groundwater flow is towards sea. Territory is covered by thin layer of Quaternary sediments in thicknesses of 10 to 20 meters although Prequaternary sediments are exposed at some places. Buried valleys are characterized as narrow, elongated and deep formations that is be filled with various, mainly Pleistocene glacigene sediments - either till loam of different ages or sand and gravel or interbedding of both above mentioned. The filling material of the valleys influences groundwater flow in the confined aquifers which is intercepted by the valleys. It is supposed that glacial till loam filled valleys serves as a barrier to groundwater flow and as a recharge conduit when filled with sand and gravel deposits. Numerical model was built within MOSYS modelling system (Virbulis et al. 2012) using finite element method in order to investigate buried valley influence on groundwater flow in the study area. Several conceptual models were tested in numerical model depending on buried valley filling material: sand and gravel, till loam or mixture of them. Groundwater flow paths and travel times were studied. Results suggested that valley filled with glacial till is acting as barrier and it causes sharp drop of piezometric head and downward flow. Valley filled with sand and gravel have almost no effect on piezometric head distribution, however it this case buried valleys encourage groundwater recharge from shallower aquifers. Modelling results with and without valleys shows that buried valleys affect piezometric head in narrow zone around valley. Sand and gravel filled buried valleys recharges confined aquifer with relatively "new" water, thus creating high vulnerability zones in the study area. This research is supported by European Regional Development Fund project Nr.2013/0054/2DP/2.1.1.1.0/13/APIA/VIAA/007 and NRP project EVIDENnT project "Groundwater and climate scenarios" subproject "Groundwater Research". References: Virbulis, J., Timuhins, A., Klints, I., Seņņikovs, J., Bethers, U., Popovs, K. 2012. Script based MOSYS system for the generation of a three dimensional geological structure and the calculation of groundwater flow: case study of the Baltic Artesian Basin. In: Highlights of groundwater research in the Baltic Artesian Basin. University of Latvia, Riga, pp. 53-74.

Past, present and future formation of groundwater resources in northern part of Baltic Artesian Basin

NASA Astrophysics Data System (ADS)

Marandi, A.; Vallner, L.; Vaikmae, R.; Raidla, V.

2012-04-01

Cambrian-Vendian Aquifer System (CVAS) is the deepest confined aquifer system used for water consumption in northern part of Baltic Artesian Basin (BAB). A regional groundwater flow and transport model (Visual Modflow) was used to investigate the paleohydrogeological scientific and contemporary management problems of CVAS. The model covers the territory of Estonia and its close surrounding, all together 88,000 km2 and includes all main aquifers and aquitards from ground surface to as low as the impermeable part of the crystalline basement. Three-dimensional distribution of groundwater heads, flow directions, velocities, and rates as well as transport and budget characteristics were simulated by the model. Water composition was changed significantly during the last glaciations.Strongly depleted O and H stable isotope composition, absence of 3H and low radiocarbon concentration are the main indicators of glacial origin of groundwater in the Cambrian-Vendian aquifer in northern Estonia. The noble gas analyses allowed concluding, that palaeorecharge took place at temperatures around the freezing point. While in North Estonia, most of water was changed by glacial melt water, high salinity water is till preserved in Southern part of Estonia.First results of modeling suggest that during the intrusion period lasting 7.3-9.3 ka the front of glacial thaw water movement had southeast direction and reachedto 180-220 kmfrom CVAS outcrop in Baltic Sea. Confining layer of CVAS is cut through by deep buried valleys in several places in North Estonia making possible for modern precipitation to infiltrate into aquifer system in present day. In case of natural conditions, the water pressure of CVAS is few meters above sea level and most of valleys act as discharge areas for aquifers system. Two regional depression ones have formed in North Estonia as a result of groundwater use from CVAS. Water consumption changes the natural groundwater gradient, flow direction and thereforerecharge through buried valleys has intensified as a result of decrease of groundwater pressure in CVAS and the changes in chemical composition can take place in the future. CVAS rocks outcrop in the bottom of Finnish gulf which is considered as discharge area during the natural conditions. Therefore the water intakes close to shoreline are the most sensible areas where hydrodynamics can the direction of flow and seawater can start to intrude into CVAS. The glacial water has δ18O value from -18.4 ‰ to -21.3 ‰, and the groundwater residence time measured by 14C method is from 22000 to 23000 years. Any change by seawater intrusion or leakage from buried valleys can be detected by isotopes. Radiocarbon and tritium are the isotopes which can be used with high confidence for detecting modern seawater intrusion. Future challenges include merging of current scientific results into regional groundwater model of BAB created by the University of Latvia.

Long-term Performance of Granular Bases Including the Effect of Wet-Dry Cycles on Inverted Base Pavement Performance

DOT National Transportation Integrated Search

2017-06-01

The main objective of this study was to advance the understanding of alternative pavement designs. In particular, potential techniques such as inverted base pavements (IBP) have increased the importance of granular aggregate bases (GAB) in pavement s...

School Kicks the Oil Habit.

ERIC Educational Resources Information Center

American School and University, 1981

1981-01-01

Underground geothermal water from an artesian well supplies heat for rural Haakon School District in Philip (South Dakota). The same water is then piped to the downtown business district a few blocks away and sold as fuel to participating merchants. (Author/MLF)

Chemical denudation and the role of sulfide oxidation at Werenskioldbreen, Svalbard

NASA Astrophysics Data System (ADS)

Stachnik, Łukasz; Majchrowska, Elżbieta; Yde, Jacob C.; Nawrot, Adam P.; Cichała-Kamrowska, Katarzyna; Ignatiuk, Dariusz; Piechota, Agnieszka

2016-07-01

This study aims to determine the rate of chemical denudation and the relationships between dominant geochemical reactions operating in the proglacial and subglacial environments of the polythermal glacier Werenskioldbreen (SW Svalbard) during an entire ablation season. Water sampling for major ion chemistry was performed at a proglacial hydrometric station and from subglacial outflows from May to September 2011. These data were combined with measurements of discharge and supraglacial ablation rates. The slopes and intercepts in best-fit regressions of [*Ca2+ + *Mg2+ vs. *SO42-] and [HCO3- vs. *SO42-] in meltwater from ice-marginal subglacial channels were close to the stoichiometric parameters of sulfide oxidation and simple hydrolysis coupled to carbonate dissolution (*concentrations corrected for input of sea-salt). This shows that these relationships predominates the meltwater chemistry. Our findings also show that sulfide oxidation is a better indicator of the configuration of subglacial drainage systems than, for instance, Na+ and K+. In the proglacial area and in sub-artesian outflows, the ion associations represent sulfide oxidation but other processes such as ion exchange and dissolution of Ca and Mg efflorescent salts may also contribute to the solute variations. These processes may cause enhanced fluxes of Ca2+ and HCO3- from glacierized basins during the early ablation and peak flow seasons as the proglacial salts re-dissolve. The overall chemical denudation rate in the basin for 2011 (ranging from 1601 to 1762 meq m-2 yr-1 (121.9 to 132.2 t km-2 yr-1)) was very high when compared to other Svalbard valley glaciers suggesting that the high rate of chemical denudation was mostly caused by the high rates of discharge and ablation. Chemical weathering intensities (876 and 964 meq m-3 yr-1) exceeded previously reported intensities in Svalbard.

GABAergic projections from lateral hypothalamus to paraventricular hypothalamic nucleus promote feeding

USDA-ARS?s Scientific Manuscript database

Lesions of the lateral hypothalamus (LH) cause hypophagia. However, activation of glutamatergic neurons in LH inhibits feeding. These results suggest a potential importance for other LH neurons in stimulating feeding. Our current study in mice showed that disruption of GABA release from adult LH GAB...

Geochemistry and Hydrogeology of Water-Filled Sinkholes at Bitter Lake NWR, Roswell, NM

NASA Astrophysics Data System (ADS)

Premo, Z. E.; Crossey, L. J.

2008-12-01

Bitter Lake NWR in southeast (Roswell) New Mexico is located at the convergence of the Pecos River and the surface discharge region in the Roswell Artesian Basin (shallow alluvial aquifer and carbonate aquifer). The Refuge hosts approximately 50 water-filled sinkholes, which each support a unique and diverse aquatic ecosystem. An initial survey of water chemistries indicates that each sink has a unique chemical identity and neutral to alkaline pH. Sinkholes are filled by one or more artesian springs, groundwater seepage and possible hydrothermal water sources. We present results of water and gas analyses of 10 representative sinkholes, sampled during spring and summer, 2008. Analytical results, including major ions, metals (arsenic, selenium, iron), and gas chemistries are compared with monitoring well data from wells found to the north of the Refuge, along the Pecos River, and to the west, along the Pecos Slope - the regional aquifer recharge area. Well samples representative of regional groundwater provide potential end member perspectives for sources of sinkhole waters. Samples were collected incrementally from the surface to sinkhole floor to profile the limnological structure and to assess chemical variation and mixing through the water column. A sonde was deployed to measure and record physical parameters. Results of the analysis are used to describe the geochemical mixing that is occurring within the sinks. As each sink behaves as an independent unit, those separated by less than 10 meters can have dramatic variability in chemical signature and biological influence. For example, among the 29 sinks sampled during the initital survey, chloride concentrations range from 1.912x10-3 to 1.405 mol/kg; sulfate from 7.204x10-4 to 0.1364 mol/kg; and fluoride from 3.579x10-4 to 3.453x10-3 mol/kg. Along the Pecos Slope, groundwater chloride concentrations increase from less than 1.410x10-3 mol/kg near the major recharge area in the Sacramento Mountains to 0.141 mol/kg in the discharge area at the Pecos River to the east of Roswell, which includes the Refuge. Sinks are thus analyzed on three resolutions: regional distribution of sink chemistry (both within the Refuge and along and to the west of the Pecos River); variability between mature and immature sinks; and the anatomy of a representative sink.

Water: from the source to the treatment plan

NASA Astrophysics Data System (ADS)

Marquet, V.; Baude, I.

2012-04-01

As a biology and geology teacher, I have worked on water, from the source to the treatment plant, with pupils between 14 and 15 years old. Lesson 1. Introduction, the water in Vienna Aim: The pupils have to consider why the water is so important in Vienna (history, economy etc.) Activities: Brainstorming about where and why we use water every day and why the water is different in Vienna. Lesson 2. Soil, rock and water Aim: Permeability/ impermeability of the different layers of earth Activities: The pupils have measure the permeability and porosity of different stones: granite, clay, sand, carbonate and basalt. Lesson 3. Relationship between water's ion composition and the stone's mineralogy Aim: Each water source has the same ion composition as the soil where the water comes from. Activities: Comparison between the stone's mineralogy and ions in water. They had a diagram with the ions of granite, clay, sand, carbonate and basalt and the label of different water. They had to make hypotheses about the type of soil where the water came from. They verified this with a geology map of France and Austria. They have to make a profile of the area where the water comes from. They had to confirm or reject their hypothesis. Lesson 4 .Water-catchment and reservoir rocks Aim: Construction of a confined aquifer and artesian well Activities: With sand, clay and a basin, they have to model a confined aquifer and make an artesian well, using what they have learned in lesson 2. Lesson 5. Organic material breakdown and it's affect on the oxygen levels in an aquatic ecosystem Aim: Evaluate the relationship between oxygen levels and the amount of organic matter in an aquatic ecosystem. Explain the relationship between oxygen levels, bacteria and the breakdown of organic matter using an indicator solution. Activities: Put 5 ml of a different water sample in each tube with 20 drops of methylene blue. Observe the tubes after 1 month. Lesson 6. Visit to the biggest water treatment plant in Europe in Vienna Lesson 7 Water Quality Monitoring: Biochemical Oxygen Demand Aim: Measure the quantity of oxygen used by microorganisms in the oxidation of organic matter for different water; downstream and upstream of polluting refuse, after addition of glucose, milk or humus in the water. Activities: After dissolution of the different samples of water they measure the dissolved oxygen with the Winkler Method.

Using Radar Interferometry (DinSAR) to Evaluate Land Subsidence Caused by Excessive Groundwater Withdrawal in Morocco

NASA Astrophysics Data System (ADS)

Durham, M. C.; Milewski, A.; El Kadiri, R.

2013-12-01

The combination of natural, anthropogenic, and climate change impacts on the water resources of the Middle East and North Africa (MENA) region has devastated its water resources well beyond its current and projected populations. The increased exploitation of groundwater resources in the past half-century coupled with successive droughts has resulted in the acceleration of subsidence rates in the Souss and Massa basins in Morocco. We have completed a preliminary investigation of these impacts on the Souss and Massa basins (~27,000 km2) in the southwestern part of Morocco. This area is characterized by a semi-arid climate (annual precipitation 70-250 mm/year) with agriculture, tourism, and commercial fishing as the primary economic activities, all of which require availability of adequate freshwater resources. Additionally the primary groundwater aquifer (Plio-Quaternary Plain Aquifer), an unconfined aquifer formed mostly of sand and gravel, is being harvested by >20,000 wells at a rate of 650 MCM/yr., exceeding the rate of recharge by 260 MCM/year. Intense development over the past 50 years has exposed the aquifer to a serious risk of groundwater table drawdown (0.5m-2.5m/yr.), land subsidence, loss of artesian pressure, salinization, salt water intrusions along the coast, and deterioration of water quality across the watershed. Differential Interferometry Synthetique Aperture Radar (DInSAR) was utilized to measure ground subsidence induced by groundwater withdrawal. Land subsidence caused by excessive groundwater extraction was determined using a threefold methodology: (1) extraction of subsidence and land deformation patterns using radar interferometry, (2) correlation of the high subsidence areas within the basins to possible natural and anthropogenic factors (e.g. sea level rise, unconsolidated lithological formations distribution, urbanization, excessive groundwater extraction), and (3) forecasting the future of the Souss and Massa basins over the next century if both subsidence and groundwater extraction continue at present rates. Interferometric processing (persistent scatter and small baseline subset) was conducted using ENVI's SARscape program with 168 archived ENVISAT SLC images and 350 ERS1/2 SLC images acquired through the European Space Agency. Radar interferometry results are spatially and temporally consistent with groundwater extraction rates. This analysis has provided insight into the impacts that land subsidence will have on the infrastructure, the population, and the economy of the Souss and Massa basins. Our results could be used to develop management plans for modulating these adverse effects and could be vital to the Moroccan economy and the livelihood of the citizens that inhabit the basins. More broadly, this approach could be applied to other areas within the MENA region facing similar impacts.

Tests for injecting, storing, and recovering freshwater in a saline artesian aquifer, Lee County, Florida

USGS Publications Warehouse

Fitzpatrick, D.J.

1986-01-01

An investigation was made of the suitability of a saline, artesian limestone aquifer for the injection, storage, and recovery of freshwater from the Caloosahatchee River. The tests were conducted on a well tapping a leaky artesian system that has a transmissivity of 800 square feet per day, a storage of 1 x 10-4, and a leakance of 0.01 per day. The specific capacity of the injection well was increased through acidizing and was decreased as a result of well clogging during injection. Three injection tests were made wherein the amounts of freshwater injected, the storage duration, and the quality of water injected varied. Analysis of the test data showed that freshwater recoverability ranged from 9.7 to 38.7 percent of the total injected. Differences were attributed principally to differences in the quality of water injected and storage duration. Repeated injection-recovery cycles probably would result in greater recoverability. Head buildup, nearly 200 feet in one test, was a prime problem related chiefly to clogging from suspended material in the injected water and to bacterial growth at the wellbore-limestone interface. Regular backflushing was required. Total head buildup decreased as a result of acidizing the injection well. No coliforms or fecal streptococcus were noted in the recovered water. Growth of anaerobic bacteria occurred. Changes in the quality of the recovered water included decreases in concentration of dissolved organic carbon by as much as 15 mg/L (milligrams per liter), organic nitrogen by as much as 0.80 mg/L, and nitrate by as much as 0.50 mg/L. Increases were noted in ammonia by 0.40 mg/L, and iron by as much as 0.60 mg/L. These changes are consistent with the presence of an anaerobic bacterial ecosystem.

Coal resource occurrence and coal development potential maps of the southwest quarter of North Star School 15-minute quadrangle, Campbell County, Wyoming

USGS Publications Warehouse

,

1979-01-01

A study of the water resources of the Port Gamble Indian Reservation, Wash., has shown that there is probably a substantial quantity of good quality ground and surface water available to provide for further development of the reservation. Groundwater supplies are available from an artesian aquifer underlying the reservation near sea level. This aquifer is estimated to be capable of supplying at least 90 gallons per minute, continuously, without greatly increasing chances for seawater intrusion. This quantity of water is enough to supply about 800 to 900 additional residents on the reservation. Another artesian aquifer, relatively unexplored, was noted underlying the previously mentioned artesian aquifer. This lower aquifer may be capable of supplying additional groundwater for use on the reservation. Groundwater quality was found to be good for most uses, being moderately hard and having moderately high iron concentrations. No evidence of pollution of the groundwater was found during this study from either seawater intrusion or contamination from a nearby solid-waste disposal site. Surface-water resources studied on the reservation included two streams, Middle and Little Boston Creeks, whose 7-day low flows were estimated to be 0.4 and 0.2 cubic foot per second, respectively, for a 20-year estimated recurrence interval. The surface-water quality was also found to be good for most uses and was within the limits established by the U.S. Environmental Protection Agency for untreated drinking water. Thus, the water from these two streams, Middle and Little Boston Creeks, could be used as domestic supplies to supplement the groundwater withdrawals. (USGS)

Effects of near-surface hydraulic gradients on nitrate and phosphorus losses in surface runoff.

PubMed

Zheng, Fen-Li; Huang, Chi-Hua; Norton, L Darrell

2004-01-01

Phosphorous (P) and nitrogen (N) in runoff from agricultural fields are key components of nonpoint-source pollution and can accelerate eutrophication of surface waters. A laboratory study was designed to evaluate effects of near-surface hydraulic gradients on P and N losses in surface runoff from soil pans at 5% slope under simulated rainfall. Experimental treatments included three rates of fertilizer input (control [no fertilizer input], low [40 kg P ha(-1), 100 kg N ha(-1)], and high [80 kg P ha(-1), 200 kg N ha(-1)]) and four near-surface hydraulic gradients (free drainage [FD], saturation [Sa], artesian seepage without rain [Sp], and artesian seepage with rain [Sp + R]). Simulated rainfall of 50 mm h(-1) was applied for 90 min. The results showed that near-surface hydraulic gradients have dramatic effects on NO(3)-N and PO(4)-P losses and runoff water quality. Under the low fertilizer treatment, the average concentrations in surface runoff from FD, Sa, Sp, and Sp + R were 0.08, 2.20, 529.5, and 71.8 mg L(-1) for NO(3)-N and 0.11, 0.54, 0.91, and 0.72 mg L(-1) for PO(4)-P, respectively. Similar trends were observed for the concentrations of NO(3)-N and PO(4)-P under the high fertilizer treatment. The total NO(3)-N loss under the FD treatment was only 0.01% of the applied nitrogen, while under the Sp and Sp + R treatments, the total NO(3)-N loss was 11 to 16% of the applied nitrogen. These results show that artesian seepage could make a significant contribution to water quality problems.

Let's Talk about Talking: Accountable Talk and Participatory Learning

ERIC Educational Resources Information Center

Huss, John A.

2007-01-01

Middle-grade students like to talk. This natural "gift of gab" may at times be suppressed by teachers who prefer to impart knowledge rather than allow students to participate in its development. Intelligence is a social practice. Students become adept at socializing their intelligence if they are encouraged to talk in meaningful and constructive…

Grandparents and Books. Trainer's Manual. Revised Edition.

ERIC Educational Resources Information Center

Wade, Maureen; And Others

Based on a pilot program developed in the Los Angeles (California) Public Library, this guide provides the materials and information needed for introducing a "Grandparents and Books" (GAB) program in a public library. The Los Angeles program was designed to bring together the city's elderly population with children who have no one to…

Die Deutsche Statistische Gesellschaft in der Weimarer Republik und während der Nazidiktatur

NASA Astrophysics Data System (ADS)

Wilke, Jürgen

Nach anfänglichen Schwierigkeiten durch den 1. Weltkrieg erlangte die Deutsche Statistische Gesellschaft (DStatG) unter dem renommierten Statistiker und Vorsitzenden der DStatG, Friedrich Zahn, durch eine Vielzahl von Aktivitäten hohes Ansehen. Es gab Bestrebungen, Statistiker aus allen Arbeitsfeldern der Statistik in die DStatG zu integrieren, wobei die "Mathematische Statistik" nur zögerlich akzeptiert wurde (Konjunkturforschung, Zeitreihenanalyse). Nach der Machtübernahme 1933 durch Adolf Hitler geriet die DStatG in das Fahrwasser nationalsozialistischer Ideologie und Politik (Führerprinzip, Gleichschaltung des Vereinswesens). Damit war eine personelle Umstrukturierung in der DStatG verbunden. Politisch Missliebige und rassisch Verfolgte mussten die DStatG verlassen (Bernstein, Freudenberg, Gumbel u.a.). Unter den Statistikern gab es alle Abstufungen im Verhalten zum Regime von Ablehnung und zwangsweiser Anpassung über bereitwilliges Mitläufertum bis zu bewusster Täterschaft. Besonders die Bevölkerungsstatistik wurde durch die NS- Rassenpolitik auf lange Sicht diskreditiert. Im Rahmen von Wirtschaftsplanung und Aufrüstung wurden neue zukunftsträchtige statistische Modelle (Grünig, Bramstedt, Leisse) entwickelt.

Role of Per1-interacting protein of the suprachiasmatic nucleus in NGF mediated neuronal survival.

PubMed

Kiyama, Atsuko; Isojima, Yasushi; Nagai, Katsuya

2006-01-13

We previously identified Per1-interacting protein of the suprachiasmatic nucleus (PIPS) in rats. To reveal its role, its tissue distribution was examined by immunoblotting. PIPS-like immunoreactive substance (PIPSLS) was observed in the brain, adrenal gland, and PC12 cells. Since PIPS, which has no nuclear localization signal (NLS), is translocated into nuclei of COS-7 cells in the presence of mPer1, the effect of NGF on nuclear localization of PIPS was examined using PC12 cells. NGF caused nuclear translocation of either PIPSLS or GFP-PIPS. NGF mediated nuclear translocation of PIPSLS was blocked by K252a, a TrkA-inhibitor, or wortmannin, a PI3K-inhibitor. Gab1, which is implicated in TrkA signaling and has NLS, co-immunoprecipitated with PIPSLS from PC12 cells using an anti-PIPS antibody. Inhibition of PIPS expression by RNAi increased levels of apoptosis in PC12 cells. These findings suggest that nuclear translocation of PIPS is involved in NGF mediated neuronal survival via TrkA, PI3K, and Gab1 signaling pathway.

Application of genomics-assisted breeding for generation of climate resilient crops: Progress and prospects

DOE PAGES

Kole, Chittaranjan; Muthamiliarasan, Mehanathan; Henry, Robert; ...

2015-08-11

Climate change affects agricultural productivity worldwide. Increased prices of food commodities are the initial indication of drastic edible yield loss, which is expected to increase further due to global warming. This situation has compelled plant scientists to develop climate change-resilient crops, which can withstand broad-spectrum stresses such as drought, heat, cold, salinity, flood, submergence and pests, thus helping to deliver increased productivity. Genomics appears to be a promising tool for deciphering the stress responsiveness of crop species with adaptation traits or in wild relatives toward identifying underlying genes, alleles or quantitative trait loci. Molecular breeding approaches have proven helpful inmore » enhancing the stress adaptation of crop plants, and recent advances in high-throughput sequencing and phenotyping platforms have transformed molecular breeding to genomics-assisted breeding (GAB). In view of this, the present review elaborates the progress and prospects of GAB for improving climate change resilience in crops, which is likely to play an ever increasing role in the effort to ensure global food security.« less

Application of genomics-assisted breeding for generation of climate resilient crops: Progress and prospects

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kole, Chittaranjan; Muthamiliarasan, Mehanathan; Henry, Robert

Climate change affects agricultural productivity worldwide. Increased prices of food commodities are the initial indication of drastic edible yield loss, which is expected to increase further due to global warming. This situation has compelled plant scientists to develop climate change-resilient crops, which can withstand broad-spectrum stresses such as drought, heat, cold, salinity, flood, submergence and pests, thus helping to deliver increased productivity. Genomics appears to be a promising tool for deciphering the stress responsiveness of crop species with adaptation traits or in wild relatives toward identifying underlying genes, alleles or quantitative trait loci. Molecular breeding approaches have proven helpful inmore » enhancing the stress adaptation of crop plants, and recent advances in high-throughput sequencing and phenotyping platforms have transformed molecular breeding to genomics-assisted breeding (GAB). In view of this, the present review elaborates the progress and prospects of GAB for improving climate change resilience in crops, which is likely to play an ever increasing role in the effort to ensure global food security.« less

Water adsorption isotherms of carboxymethyl cellulose, guar, locust bean, tragacanth and xanthan gums.

PubMed

Torres, María D; Moreira, Ramón; Chenlo, Francisco; Vázquez, María J

2012-06-20

Water adsorption isotherms of carboxymethyl cellulose (CMC), guar gum (GG), locust bean gum (LBG), tragacanth gum (TG) and xanthan gum (XG) were determined at different temperatures (20, 35, 50, and 65°C) using a gravimetric method. Several saturated salt solutions were selected to obtain different water activities in the range from 0.09 to 0.91. Water adsorption isotherms of tested hydrocolloids were classified like type II isotherms. In all cases, equilibrium moisture content decreased with increasing temperature at each water activity value. Three-parameter Guggenheim-Anderson-de Boer (GAB) model was employed to fit the experimental data in the water activity range and statistical analysis indicated that this model gave satisfactory results. CMC and GG were the most and the least hygroscopic gums, respectively. Sorption heats decreased with increasing moisture content. Monolayer moisture content evaluated with GAB model was consistent with equilibrium conditions of maximum stability calculated from thermodynamic analysis of net integral entropy. Values of equilibrium relative humidity at 20°C are proposed to storage adequately the tested gums. Copyright © 2012 Elsevier Ltd. All rights reserved.

[Mobile emergency care medical records audit: the need for Tunisian guidelines].

PubMed

Mallouli, Manel; Hchaichi, Imen; Ammar, Asma; Sehli, Jihène; Zedini, Chekib; Mtiraoui, Ali; Ajmi, Thouraya

2017-03-06

Objective: This study was designed to assess the quality of the Gabès (Tunisia) mobile emergency care medical records and propose corrective actions.Materials and methods: A clinical audit was performed at the Gabès mobile emergency care unit (SMUR). Records of day, night and weekend primary and secondary interventions during the first half of 2014 were analysed according to a data collection grid comprising 56 criteria based on the SMUR guidelines and the 2013 French Society of Emergency Medicine evaluation guide. A non-conformance score was calculated for each section.Results: 415 medical records were analysed. The highest non-conformance rates (48.5%) concerned the “specificities of the emergency medical record” section. The lowest non-conformance rates concerned the surveillance data section (23.4%). The non-conformance score for the medical data audit was 24%.Conclusion: This audit identified minor dysfunctions that could be due to the absence of local guidelines concerning medical records in general and more specifically SMUR. Corrective measures were set up in the context of a short-term and intermediate-term action plan.

The response of fluid-saturated reservoirs to lunisolar tides: Part 1. Background parameters of tidal components in ground displacements and groundwater level

NASA Astrophysics Data System (ADS)

Besedina, A. N.; Vinogradov, E. A.; Gorbunova, E. M.; Kabychenko, N. V.; Svintsov, I. S.; Pigulevskiy, P. I.; Svistun, V. K.; Shcherbina, S. V.

2015-01-01

The first part of this work is dedicated to the response of different-age structures to lunisolar tides, which can be considered as a sounding signal for monitoring the state of fluid-saturated reservoirs. The complex approach to processing the data obtained at the testing sites of the Institute of Geosphere Dynamics of the Russian Academy of Sciences, Institute of Geophysics of the National Academy of Sciences of Ukraine, and KIEV station of the IRIS seismic network is applied for recognizing the tides against the hydrogeological, barometric, and seismic series. The comparative analysis of the experimental and theoretical values of the diurnal and semidiurnal tidal components in the time series of ground displacements is carried out. The tidal variations in the groundwater level are compared with the tidal components revealed in the ground displacement of the different-age structure of the Moscow Basin and Ukrainian Shield, which are parts of the East European artesian region. The differences in the tidal responses of the groundwater level and ground displacement probably suggest that the state of the massif is affected by certain additional factors associated, e.g., with the passage of earthquake-induced seismic waves and the changes in the hydrogeodynamic environment.

Discovery of South American suckermouth armored catfishes (Loricariidae, Pterygoplichthys spp.) in the Santa Fe River drainage, Suwannee River basin, USA

USGS Publications Warehouse

Nico, Leo G.; Butt, Peter L.; Johnston, Gerald R.; Jelks, Howard L.; Kail, Matthew; Walsh, Stephen J.

2012-01-01

We report on the occurrence of South American suckermouth armored catfishes (Loricariidae) in the Suwannee River basin, southeastern USA. Over the past few years (2009-2012), loricariid catfishes have been observed at various sites in the Santa Fe River drainage, a major tributary of the Suwannee in the state of Florida. Similar to other introduced populations of Pterygoplichthys, there is high likelihood of hybridization. To date, we have captured nine specimens (270-585 mm, standard length) in the Santa Fe River drainage. One specimen taken from Poe Spring best agrees with Pterygoplichthys gibbiceps (Kner, 1854) or may be a hybrid with either P. pardalis or P. disjunctivus. The other specimens were taken from several sites in the drainage and include seven that best agree with Pterygoplichthys disjunctivus (Weber, 1991); and one a possible P. disjunctivus x P. pardalis hybrid. We observed additional individuals, either these or similar appearing loricariids, in Hornsby and Poe springs and at various sites upstream and downstream of the long (> 4 km) subterranean portion of the Santa Fe River. These specimens represent the first confirmed records of Pterygoplichthys in the Suwannee River basin. The P. gibbiceps specimen represents the first documented record of an adult or near adult of this species in open waters of North America. Pterygoplichthys disjunctivus or its hybrids (perhaps hybrid swarms) are already abundant and widespread in other parts of peninsular Florida, but the Santa Fe River represents a northern extension of the catfish in the state. Pterygoplichthys are still relatively uncommon in the Santa Fe drainage and successful reproduction not yet documented. However, in May 2012 we captured five adult catfish (two mature or maturing males and three gravid females) from a single riverine swallet pool. One male was stationed at a nest burrow (no eggs present). To survive the occasional harsh Florida winters, these South American catfish apparently use artesian springs as thermal refugia. In the Santa Fe River, eradication might be possible during cold periods when catfish congregate in spring habitats. However, should Pterygoplichthys increase in number and disperse more widely, the opportunity to eliminate them from the drainage will pass.

Some New Windows into Terrestrial Deep Subsurface Microbial Ecosystems

NASA Astrophysics Data System (ADS)

Moser, D. P.

2011-12-01

Over the past several years, our group has surveyed the microbial ecology and biogeochemistry of a range of fracture rock subsurface ecosystems via deep mine boreholes in South Africa, the United States, and Canada; and boreholes from surface or deeply-sourced natural springs of the U.S. Great Basin. Collectively, these mostly unexplored habitats represent a wide range of geologic provinces, host rock types, aquatic chemistries, and the vast potential for biogeographic isolation. Thus, patterns of microbial diversity are of interest from the perspective of filling a fundamental knowledge gap; and while not necessarily expected, the detection of closely related microorganisms from geographically isolated settings would be noteworthy. Across these sample sets, microbial communities were invariably very low in biomass (e.g. 10e3 - 10e4 cells per mL) and dominated by deeply-branching bacterial lineages, particularly from the phyla Firmicutes and Nitrospira. In several cases, the Firmicutes have shown very close phylogenetic affiliations to lineages detected at divergent locations. For example, one abundant lineage from a new artesian well drilled into the Furnace Creek Fault of Death Valley, CA bears a very close phylogenetic relatedness to environmental DNA sequences (SSU rRNA gene) detected in one of the world's deepest mines (Tau Tona of South Africa) and what was North America's deepest gold mine (Homestake of South Dakota). Several radioactive wells from the Nevada National Security Site have produced rRNA gene sequences very close (e.g. greater than 99% identity) to that of Desulforudis audaxviator, a rarely detected microorganism thought to subsist as a single species ecosystem on the products of radiochemical reactions in deep crustal rocks from the South African Witwatersrand Basin. These sequences, along with more distantly related sequences from the marine subsurface (ridge flank basalt and mud volcanoes) and groundwater in Europe, hint at a role in certain hydrogen-rich subsurface settings for this group. Likewise, patterns of archaeal diversity across many of our Great Basin sites suggest shared deep lineages, particularly with the phylum, Thaumarchaeota. Here we will explore the possible significance of these patterns of diversity and discuss future research plans involving high throughput molecular techniques.

Non-canonical dynamic mechanisms of interaction between the p66Shc protein and Met receptor

PubMed Central

Landry, Mélissa; Pomerleau, Véronique; Saucier, Caroline

2016-01-01

Met receptor tyrosine kinase (RTK) is known to bind to the three distinct protein isoforms encoded by the ShcA (Shc) gene. Structure–function studies have unveiled critical roles for p52Shc-dependent signalling pathways in Met-regulated biological functions. The molecular basis of the interaction between the Met and p52Shc proteins is well-defined, but not for the longest protein isoform, p66Shc. In the present study, co-immunoprecipitation assays were performed in human embryonic kidney 293 (HEK293) cells, transiently co-transfected with Met and p66Shc mutants, in order to define the molecular determinants involved in mediating Met–p66Shc interaction. Our results show that p66Shc interacts constitutively with the receptor Met, and the Grb2 (growth factor receptor-bound protein-2) and Gab1 (Grb2-associated binder-1) adaptor proteins. Although its phosphotyrosine-binding domain (PTB) and Src homology 2 (SH2) domains co-ordinate p66Shc binding to non-activated Met receptor, these phosphotyrosine-binding modules, and its collagen homology domain 2 (CH2) region, exert negative constraints. In contrast, p66Shc interaction with the activated Met depends mainly on the integrity of its PTB domain, and to a lesser extent of its SH2 domain. Even though not required for the recruitment of p66Shc, tyrosine phosphorylation of p66Shc by activated Met enhances these interactions by mechanisms not reliant on the integrity of the Met multisubstrate-binding site. In turn, this increases phosphotyrosine-dependent p66Shc–Grb2–Gab1 complex formation away from the receptor, while blocking Grb2 and Gab1 recruitment to activated Met. In conclusion, we identify, for the first time, a novel non-canonical dynamic mode of interaction between Met and the p66 protein isoform of Shc and its effects on rewiring binding effector complexes according to the activation state of the receptor. PMID:27048591

CAUSES OF MORTALITY IN AN ARSENIC-AFFECTED AREAS OF INNER MONGOLIA, CHINA

EPA Science Inventory

Introduction

Shahai is a village in Inner Mongolia, China. In the early 1980s, the primary source of drinking water shifted away from large shallow wells to deeper artesian wells, which were often contaminated by naturally occurring arsenic. Characteristic arsenic-induced ...

Forever Fresh

ERIC Educational Resources Information Center

Sartorius, Tara Cady

2011-01-01

Pure visual art is a silent communicator. The people who make it have something to say, yet they don't always say it out loud. They count on others to look at their art, and to gather meaning from materials and forms arranged to pluck familiar and unfamiliar chords. Some artists have the gift of gab. They are sociable and outspoken. Those artists…

Ground-water resources of Sheridan County, Wyoming

USGS Publications Warehouse

Lowry, Marlin E.; Cummings, T. Ray

1966-01-01

Sheridan County is in the north-central part of Wyoming and is an area of about 2,500 square miles. The western part of the county is in the Bighorn Mountains, and the eastern part is in the Powder River structural basin. Principal streams are the Powder and Tongue Rivers, which are part of the Yellowstone River system. The climate is semiarid, and the mean annual precipitation at Sheridan is about 16 inches. Rocks of Precambrian age are exposed in the central part of the Bighorn Mountains, and successively younger rocks are exposed eastward. Rocks of Tertiary age, which are the most widespread, are exposed throughout a large part of the Powder River structural basin. Deposits of Quaternary age underlie the flood plains and terraces along the larger streams, particularly in the western part of the basin. Aquifers of pre-Tertiary age are exposed in the western part of the county, but they dip steeply and are deeply buried just a few miles east of their outcrop. Aquifers that might yield large supplies of water include the Bighorn Dolomite, Madison Limestone, Amsden Formation, and Tensleep Sandstone. The Flathead Sandstone, Sundance Formation, Morrison Formation, Cloverly Formation,. Newcastle Sandstone, Frontier Formation, Parkman Sandstone, Bearpaw Shale, .and Lance Formation may yield small or, under favorable conditions, moderate supplies of water. Few wells tap aquifers of pre-Tertiary age, and these are restricted to the outcrop area. The meager data available indicate that the water from the Lance Formation, Bearpaw Shale, Parkman Sandstone, Tensleep Sandstone and Amsden Formation, and Flathead Standstone is of suitable quality for domestic or stock purposes, and that water from the Tensleep Sandstone and Amsden Formation and the Flathead Sandstone is of good quality for irrigation. Samples could not be obtained from other aquifers of pre-Tertiary age; so the quality of water in these aquifers could not be determined. Adequate supplies of ground water for stock or domestic use can be developed throughout much of the report area from the Fort Union and Wasatch Formations of Tertiary age; larger supplies might be obtained from the coarse-grained sandstone facies of the Wasatch Formation near Moncreiffe Ridge. Four aquifer tests were made at wells tapping formations of Tertiary age, and the coefficients of permeability determined ranged from 2.5 to 7.9 gallons per day per square foot. The depths to which wells must be drilled to penetrate an aquifer differ within relatively short distances because of the lenticularity of the aquifers. Water in aquifers of Tertiary age may occur under water-table, artesian, or a combination of artesian and gas-lift conditions. Water from the Fort Union is usable for domestic purposes, but the iron and dissolved-solids content impair the quality at some localities. Water from the Fort Union Formation is not recommended for irrigation because of sodium and bicarbonate content. The water is regarded as good to fair for stock use. Water from the Wasatch Formation generally contains dissolved solids in excess of the suggested domestic standards, but this water is usable in the absence of other supplies. The development of irrigation supplies from the Wasatch Formation may be possible in some areas, but the water quality should be carefully checked. Water of good to very poor quality for stock supplies is obtained, depending upon the location. Hydrogen sulfide, commonly present in water of the Fort Union and Wasatch Formations, becomes an objectionable characteristic when the water is used for human consumption. Deposits of Quaternary age generally yield small to moderate supplies of water to wells. Two pumping tests were conducted, and the coefficients of permeability of the aquifers tested were 380 and 1,100 gallons per day per square foot. Usable supplies of ground water can be developed from the deposits of Quaternary age, principally along the valleys of perennial strea

What's killing my walnuts -- how to find help

Treesearch

Jerry Van Sambeek; Jenny. Juzwik

2010-01-01

For the last decade, we have watched as the granulate ambrosia beetle (GAB) formerly the Asian ambrosia beetle spread into the southern region of walnut. Now we are asked to watch for the possible invasion of the thousand canker disease (TCD) complex into the eastern United States assuming we cannot prevent its invasion from the western United States. For both pest...

NiCd cell reliability in the mission environment

NASA Technical Reports Server (NTRS)

Denson, William K.; Klein, Glenn C.

1993-01-01

This paper summarizes an effort by Gates Aerospace Batteries (GAB) and the Reliability Analysis Center (RAC) to analyze survivability data for both General Electric and GAB NiCd cells utilized in various spacecraft. For simplicity sake, all mission environments are described as either low Earth orbital (LEO) or geosynchronous Earth orbit (GEO). 'Extreme value statistical methods' are applied to this database because of the longevity of the numerous missions while encountering relatively few failures. Every attempt was made to include all known instances of cell-induced-failures of the battery and to exclude battery-induced-failures of the cell. While this distinction may be somewhat limited due to availability of in-flight data, we have accepted the learned opinion of the specific customer contacts to ensure integrity of the common databases. This paper advances the preliminary analysis reported upon at the 1991 NASA Battery Workshop. That prior analysis was concerned with an estimated 278 million cell-hours of operation encompassing 183 satellites. The paper also cited 'no reported failures to date.' This analysis reports on 428 million cell hours of operation emcompassing 212 satellites. This analysis also reports on seven 'cell-induced-failures.'

JAK2-V617F-induced MAPK activity is regulated by PI3K and acts synergistically with PI3K on the proliferation of JAK2-V617F-positive cells

PubMed Central

Wolf, Alexandra; Eulenfeld, René; Gäbler, Karoline; Rolvering, Catherine; Haan, Serge; Behrmann, Iris; Denecke, Bernd; Haan, Claude; Schaper, Fred

2013-01-01

The identification of a constitutively active JAK2 mutant, namely JAK2-V617F, was a milestone in the understanding of Philadelphia chromosome-negative myeloproliferative neoplasms. The JAK2-V617F mutation confers cytokine hypersensitivity, constitutive activation of the JAK-STAT pathway, and cytokine-independent growth. In this study we investigated the mechanism of JAK2-V617F-dependent signaling with a special focus on the activation of the MAPK pathway. We observed JAK2-V617F-dependent deregulated activation of the multi-site docking protein Gab1 as indicated by constitutive, PI3K-dependent membrane localization and tyrosine phosphorylation of Gab1. Furthermore, we demonstrate that PI3K signaling regulates MAPK activation in JAK2-V617F-positve cells. This cross-regulation of the MAPK pathway by PI3K affects JAK2-V617F-specific target gene induction, erythroid colony formation, and regulates proliferation of JAK2-V617F-positive patient cells in a synergistically manner. PMID:24069558

Installation Restoration Program. Phase 1: Records Search, Whiteman AFB, Missouri

DTIC Science & Technology

1984-03-26

Aquazene (Ciba-Geigy) was added to each remote site lagoon (A-i through N-i) on a one-time basis as an algicide . Brine line leakage has been noted at...layered strata are inclined down and away from the axes. AQUAZENE: an algicide . ARRS: Aerospace Rescue and Recovery Squadron. ARTESIAN: Ground water

Water-Resources Information for the Withlacoochee River Region, West-Central Florida.

DTIC Science & Technology

1981-08-01

116 Water use ................................... ............... 116 Analysis of recent water-use data...secondary artesian aquifers ............................................ 117 Analysis of water-rich areas .................... 117 Effects of mining on...records; no new data were collected. If two or more published reports were found to be in conflict regarding data or analysis no attempts were made to

Organophosphate Pesticide Residues in Drinking Water from Artesian Wells and Health Risk Assessment of Agricultural Communities, Thailand

PubMed Central

Jaipieam, S.; Visuthismajarn, P.; Sutheravut, P.; Siriwong, W.; Thoumsang, S.; Borjan, M.; Robson, M.

2010-01-01

Organophosphate pesticide (OPPs) concentrations in artesian wells located in Thai agricultural and non-agricultural communities were studied during both wet and dry seasons. A total of 100 water samples were collected and subjects were asked to complete a survey. Gas chromatography flame photometric detector was used for OPP analysis. The average OPP concentration in the agricultural communities (0.085 and 0.418 µg/l in dry and wet season) was higher than in the non-agricultural communities (0.004 µg/l in both seasons). Ingestion of OPPs in contaminated water in the agricultural communities were estimated to be 0.187 and 0.919 µg/day during the dry and wet seasons, respectively, and 0.008 µg/day during both seasons in the non-agricultural communities. Agricultural communities were exposed to pesticide residues under the oral chronic reference dose. This study suggests that people in agricultural communities may be exposed to significantly greater levels of pesticides than non-agricultural populations during the dry and wet seasons (p < .001, .001). PMID:20485459

Summary of well construction, testing, and preliminary findings from the Alligator Alley test well, Broward County, Florida

USGS Publications Warehouse

Meyer, F.W.

1988-01-01

A 2,811-foot deep test well was drilled during 1980 in The Everglades along Alligator Alley as part of the Floridan Regional Aquifer Systems Analysis project. The well was cased 895 feet deep. Hydraulic packers were used to isolate selected zones in the open hole for water samples and measurement of water levels. The well penetrated the surficial and intermediate aquifers into the Floridan aquifer system. The top of the Floridan aquifer system occurs at 770 feet and includes limestone ranging in age from Oligocene to early Eocene. About 67 percent of the total thickness of the Floridan aquifer system was penetrated by the well. The chief water-producing zones in the Floridan aquifer system occur at about 1,030 feet and at about 2,560 feet. The 1,030-foot zone contains brackish artesian groundwater, and the 2,560-foot zone contains salty artesian groundwater similar in composition to seawater. The static water geothermal gradient is indicated, and radiocarbon activities suggest that the saltwater in the lower zone is younger than brackish groundwater in the upper zone. (USGS)

Organophosphate Pesticide Residues in Drinking Water from Artesian Wells and Health Risk Assessment of Agricultural Communities, Thailand.

PubMed

Jaipieam, S; Visuthismajarn, P; Sutheravut, P; Siriwong, W; Thoumsang, S; Borjan, M; Robson, M

2009-01-01

Organophosphate pesticide (OPPs) concentrations in artesian wells located in Thai agricultural and non-agricultural communities were studied during both wet and dry seasons. A total of 100 water samples were collected and subjects were asked to complete a survey. Gas chromatography flame photometric detector was used for OPP analysis. The average OPP concentration in the agricultural communities (0.085 and 0.418 microg/l in dry and wet season) was higher than in the non-agricultural communities (0.004 microg/l in both seasons). Ingestion of OPPs in contaminated water in the agricultural communities were estimated to be 0.187 and 0.919 microg/day during the dry and wet seasons, respectively, and 0.008 microg/day during both seasons in the non-agricultural communities. Agricultural communities were exposed to pesticide residues under the oral chronic reference dose. This study suggests that people in agricultural communities may be exposed to significantly greater levels of pesticides than non-agricultural populations during the dry and wet seasons (p < .001, .001).

Hydrogeologic and water-quality reconnaissance of the artesian aquifer under the Shoalwater Bay Indian Reservation and Tokeland Peninsula, Pacific County, Washington, 1998-99

USGS Publications Warehouse

Lane, R.C.; Ebbert, J.C.

2002-01-01

The U.S. Geological Survey (USGS) collected and compiled hydrogeologic and water quality data from September 1998 through September 1999 to describe the hydrogeologic setting and to assess the quality of the water in the artesian aquifer under the Shoalwater Bay Indian Reservation and the adjacent Tokeland Peninsula area of Pacific County, Washington. Hydrogeologic data include descriptions of 38 wells, lithologic data for 27 wells, and water-level data for 17 wells and 1 tidal station. Water-quality data include field measurements for temperature, specific conductance, pH, alkalinity, bicarbonate, carbonate, dissolved oxygen, and laboratory analyses for major inorganic ions, metals, nutrients, methylene blue-active substances, and pesticides. None of the 93 field measurements or chemicals analyzed for exceeded the U.S. Environmental Protection Agency (USEPA) primary standards for drinking water and only 2 constituents (iron and manganese) exceeded the USEPA secondary standards. Sixty-six of the constituents (including all 53 pesticides) were at or below the reporting or detection levels established by the USGS National Water Quality Laboratory.

Utilization by fishes of the Alviso Island ponds and adjacent waters in south san francisco bay following restoration to tidal influence

USGS Publications Warehouse

Saiki, M.K.; Mejia, F.H.

2009-01-01

Earthen levees of three isolated salt ponds known locally as the Alviso Island Ponds were intentionally breached in March 2006 to allow tidal exchange of the ponds with water from Coyote Creek. The water exchange transformed the previously fishless hypersaline ponds into lower salinity habitats suitable for fish life. This study documented fish utilization of the ponds, adjacent reaches of Coyote Creek, and an upstream reach in nearby Artesian Slough during May-July 2006. By the time the study was initiated, water quality conditions in the ponds were similar to conditions in adjacent reaches of Coyote Creek. The only variable exhibiting a strong gradient within the study area was salinity, which increased progressively from upstream to downstream in Coyote Creek. A total of 4,034 fish represented by 18 species from 14 families was caught during the study. Judging from cluster analysis of presence-absence data that excluded rare fish species, the 10 sampling units (3 ponds, 6 reaches in Coyote Creek, and 1 reach in Artesian Slough) formed two clusters or groups, suggesting two species assemblages. The existence of two groups was also suggested by ordination with non-metric multidimensional scaling (NMS). One group, which was composed of the three ponds and four of the lowermost reaches of Coyote Creek, was characterized by mostly estuarine or marine species (e.g., topsmelt, Atherinops affinis; northern anchovy, Engraulis mordax; and longjaw mudsucker, Gillichthys mirabilis). The second group, which was composed of the two uppermost reaches of Coyote Creek and the one reach of Artesian Slough, was characterized by freshwater species (e.g., Sacramento sucker, Catostomus occidentalis) and by an absence of the estuarine/marine species noted in the first assemblage. Judging from a joint plot of selected water quality variables overlaying the ordination results, salinity was the only important variable associated with spatial distribution of fish species. Water temperature, dissolved oxygen, and pH had little influence on fish distribution during this study.

Co-localization of major quantitative trait loci for pod size and weight to a 3.7 cM interval on chromosome A05 in cultivated peanut (Arachis hypogaea L.)

USDA-ARS?s Scientific Manuscript database

Cultivated peanut (Arachis hypogaea L.), an important source of edible oil and protein, is widely grown in tropical and subtropical areas of the world. Genetic improvement of yield-related traits is essential for improving yield potential of new peanut varieties. Genomics-assisted breeding (GAB) can...

The Lived Experiences of 3rd Generation and beyond U.S.-Born Mexican Heritage College Students: A Qualitative Study

ERIC Educational Resources Information Center

Galvan, Richard

2011-01-01

The purpose of this study was to describe the psychosocial and identity challenges of 3rd generation and beyond U.S.-born (3GAB-USB) Mexican heritage college students. Alvarez (1973) has written about the psychosocial impact "hybridity" can have on a U.S.- born (USB) Mexican individual who incorporates two distinct cultures (American and…

miR in CLL: more than mere markers of prognosis?

PubMed

Kater, Arnon P; Eldering, Eric

2014-07-03

In this issue of Blood, Mraz et al show that microRNA-150 (miR-150) is the most abundantly expressed miR in chronic lymphocytic leukemia (CLL) and affects the threshold for B-cell receptor (BCR) signaling by repressing expression levels of GAB1 and FOXP1. This functional link might explain the described association between expression levels of miR-150 and prognosis.

Preclinical Evaluation of MET Inhibitor INC-280 With or Without the Epidermal Growth Factor Receptor Inhibitor Erlotinib in Non–Small-Cell Lung Cancer

PubMed Central

Lara, Matthew S.; Holland, William S.; Chinn, Danielle; Burich, Rebekah A.; Lara, Primo N.; Gandara, David R.; Kelly, Karen; Mack, Philip C.

2018-01-01

The MET inhibitor INC-280 restored sensitivity to erlotinib and promoted apoptosis in non–small-cell lung cancer models rendered resistant to erlotinib by hepatocyte growth factor. Background Although the epidermal growth factor receptor (EGFR) inhibitor erlotinib is initially effective in non–small-cell lung cancer (NSCLC) patients with tumors harboring activating mutations of EGFR, most subsequently develop acquired resistance. One recognized resistance mechanism occurs through activation of bypass signaling via the hepatocyte growth factor (HGF)-MET pathway. INC-280 is a small molecule kinase inhibitor of MET. We sought to demonstrate the activity of INC-280 on select NSCLC cell lines both as a single agent and in combination with erlotinib using exogenous HGF to simulate MET up-regulation. Methods Four NSCLC cell lines (HCC827, PC9, H1666, and H358) were treated with either single-agent INC-280 or in combination with erlotinib with or without HGF. The activity of the drug treatments was measured by cell viability assays. Immunoblotting was used to monitor expression of EGFR/pEGFR, MET/pMET, GAB1/pGAB1, AKT/pAKT, and ERK/pERK as well as markers of apoptosis (PARP and capase-3 cleavage) in H1666, HCC827, and PC9. Results As a single agent, INC-280 showed minimal cytotoxicity despite potent inhibition of MET kinase activity at concentrations as low as 10 nM. Addition of HGF prevented erlotinib-induced cell death. The addition of INC280 to HGF-mediated erlotinib-resistant models restored erlotinib sensitivity for all cell lines tested, associated with cleavage of both PARP and caspase-3. In these models, INC-280 treatment was sufficient to restore erlotinib-induced inhibition of MET, GAB1, AKT, and ERK in the presence of HGF. Conclusion Although the MET inhibitor INC-280 alone had no discernible effect on cell growth, it was able to restore sensitivity to erlotinib and promote apoptosis in NSCLC models rendered erlotinib resistant by HGF. These data provide a preclinical rationale for an ongoing phase 1 clinical trial of erlotinib plus INC-280 in EGFR-mutated NSCLC. PMID:28038979

The "Transport Specificity Ratio": a structure-function tool to search the protein fold for loci that control transition state stability in membrane transport catalysis

PubMed Central

King, Steven C

2004-01-01

Background In establishing structure-function relationships for membrane transport proteins, the interpretation of phenotypic changes can be problematic, owing to uncertainties in protein expression levels, sub-cellular localization, and protein-folding fidelity. A dual-label competitive transport assay called "Transport Specificity Ratio" (TSR) analysis has been developed that is simple to perform, and circumvents the "expression problem," providing a reliable TSR phenotype (a constant) for comparison to other transporters. Results Using the Escherichia coli GABA (4-aminobutyrate) permease (GabP) as a model carrier, it is demonstrated that the TSR phenotype is largely independent of assay conditions, exhibiting: (i) indifference to the particular substrate concentrations used, (ii) indifference to extreme changes (40-fold) in transporter expression level, and within broad limits (iii) indifference to assay duration. The theoretical underpinnings of TSR analysis predict all of the above observations, supporting that TSR has (i) applicability in the analysis of membrane transport, and (ii) particular utility in the face of incomplete information on protein expression levels and initial reaction rate intervals (e.g., in high-throughput screening situations). The TSR was used to identify gab permease (GabP) variants that exhibit relative changes in catalytic specificity (kcat/Km) for [14C]GABA (4-aminobutyrate) versus [3H]NA (nipecotic acid). Conclusions The TSR phenotype is an easily measured constant that reflects innate molecular properties of the transition state, and provides a reliable index of the difference in catalytic specificity that a carrier exhibits toward a particular pair of substrates. A change in the TSR phenotype, called a Δ(TSR), represents a specificity shift attributable to underlying changes in the intrinsic substrate binding energy (ΔGb) that translocation catalysts rely upon to decrease activation energy (). TSR analysis is therefore a structure-function tool that enables parsimonious scanning for positions in the protein fold that couple to the transition state, creating stability and thereby serving as functional determinants of catalytic power (efficiency, or specificity). PMID:15548327

Amorphous silica maturation in chemically weathered clastic sediments

NASA Astrophysics Data System (ADS)

Liesegang, Moritz; Milke, Ralf; Berthold, Christoph

2018-03-01

A detailed understanding of silica postdepositional transformation mechanisms is fundamental for its use as a palaeobiologic and palaeoenvironmental archive. Amorphous silica (opal-A) is an important biomineral, an alteration product of silicate rocks on the surface of Earth and Mars, and a precursor material for stable silica phases. During diagenesis, amorphous silica gradually and gradationally transforms to opal-CT, opal-C, and eventually quartz. Here we demonstrate the early-stage maturation of several million year old opal-A from deeply weathered Early Cretaceous and Ordovician sedimentary rocks of the Great Artesian Basin (central Australia). X-ray diffraction, scanning electron microscopy, and electron probe microanalyses show that the mineralogical maturation of the nanosphere material is decoupled from its chemical properties and begins significantly earlier than micromorphology suggests. Non-destructive and locally highly resolved X-ray microdiffraction (μ-XRD2) reveals an almost linear positive correlation between the main peak position (3.97 to 4.06 Å) and a new asymmetry parameter, AP. Heating experiments and calculated diffractograms indicate that nucleation and growth of tridymite-rich nanodomains induce systematic peak shifts and symmetry variations in diffraction patterns of morphologically juvenile opal-A. Our results show that the asymmetry parameter traces the early-stage maturation of amorphous silica, and that the mineralogical opal-A/CT stage extends to smaller d-spacings and larger FWHM values than previously suggested.

The use of Stable Isotopes to Assess Climatic Controls on Groundwater Recharge in the Southern Sacramento Mountains, New Mexico

NASA Astrophysics Data System (ADS)

Newton, B. T.; Timmons, S. S.; Rawling, G. C.; Kludt, T.; Eastoe, C. J.

2008-12-01

We used the stable isotopes of hydrogen and oxygen to relate the temporal variability of groundwater recharge to climatic conditions in the southern Sacramento Mountains as a part of a larger regional hydrogeologic study. The southern Sacramento Mountains are the primary recharge source not only to local aquifers, but also to the Lower Pecos River Basin, the Roswell Artesian aquifer and aquifers in the Salt Basin. Aquifers in the study area mainly consist of fractured limestone. In years prior to 2006, groundwater levels within the study area showed a steady decline. We observed a significant increase in regional groundwater levels and spring discharge during and shortly after the unusually wet 2006 monsoon season. We developed a local meteoric water line (LMWL) in δ18O vs. δD space based on precipitation samples collected from several different elevations over a period of two years. The stable isotopic compositions of streams during base flow conditions define an evaporation line with a slope of 5.5 that intersects the LMWL in the region that represents winter precipitation. Spring and well samples collected in 2003 and spring samples collected in 2008 exhibit isotopic compositions that plot near the evaporation line, indicating that groundwater recharge is largely snow melt that has subsequently undergone evaporation in local streams. After the unusually wet 2006 monsoon season, the isotopic compositions of springs sampled in fall of 2006 and wells sampled in spring of 2007 deviated from the evaporation line, plotting closer to the LMWL. This observed isotopic trend is thought to represent a large input of 2006 monsoon precipitation to the groundwater system via relatively short fracture-dominated flow paths. Stable isotope results indicate that while snow melt is probably the main source of groundwater recharge in the southern Sacramento Mountains, as exhibited by the 2003 and 2008 samples, above average summer precipitation events, such as in 2006, can also contribute to significant groundwater recharge.

Oral Historical, Documentary and Archaeological Investigations of Colbert, Barton, and Vinton, Mississippi: An Interim Report on Phase I of the Tombigbee Historic Townsites Project. Volume I.

DTIC Science & Technology

1982-05-01

wells, springs, and troughs constructed near artesian wells. Cornmeal and molasses production both required specialized equipment. Inf or- mants recall...their own. Blacks relied heavily on cornmeal , while the white population usually maintained stocks of wheat flour. Transportation. River transportation

Numerical simulations of the impact of hydraulic anisotropy and anthropogenic activities on the complex hydrogeological system of the Lower Yarmouk Gorge

NASA Astrophysics Data System (ADS)

Tzoufka, Kalliopi; Siebert, Christian; Rödiger, Tino; Inbar, Nimrod; Shalev, Eyal; Möller, Peter; Raggad, Marwan; Rosenthal, Eliahu; Magri, Fabien

2017-04-01

Transient numerical simulations of coupled fluid flow and heat transport processes were conducted, to investigate (i) the impact of hydraulic anisotropy on a complex hydrogeological system and (ii) the anomalous geothermal gradient in the Upper Cretaceous (A7/B2) aquifer of the Lower Yarmouk Gorge (LYG). The N-S directed geological profile starts on the basalt-covered Golan Heights, crosses the LYG and ends at the Jordanian Ajloun Plateau. Heated fresh groundwaters ascend within the LYG from the confined A7/B2 limestone aquifer through artesian Meizar wells and artesian Muhkeibeh well field. A hydrogeological study based on high frequency water-table measurements at the Meizar wells suggested strong impact of abstraction at the Mukheibeh wells on the hydraulic head distribution north of the LYG (Shalev et al., 2015). Contrastingly, hydrochemical investigations conducted in the area concluded that recharge areas of the A7/B2 aquifer are: (i) the foothills of Mountain Hermon, (ii) the Ajloun Plateau and (iii) the Syrian Hauran Plateau, indicating the presence of a zone of high-hydraulic anisotropy along the main LYG axis. Due to this still debatable hydraulic feature, flow along the LYG principle axis is enhanced whilst flow perpendicular to it is constrained (Siebert et al., 2014). In agreement, transient simulations based on a NW-SE profile supported further the hypothesis of a structural feature existent (Magri et al., 2015). The modeled profile cross-cuts the heterogeneous zone and hence the heterogeneity was implemented as an impermeable zone by employing the Equivalent Porous Media approach. Initial 2D models managed to successfully reproduce the natural hydraulic head and temperature distributions. In subsequent simulations, by implementing Meizar abstraction rates, results revealed that mixed convection explains the anomalous temperature gradient in the area as temperature patterns of these simulations are in accordance with a temperature-depth borehole profile. Most significantly, the existence of a zone of anisotropic hydraulic conductivity at the LYG, as suggested above, is supported. Sensitivity analysis of the heterogeneous permeability zone (ranging between 1e-7 m/s and 1e-10 m/s) simultaneously displayed hydraulic connectivity and prevented fluid flux occurrence between the northern and southern LYG flanks. Within the studied aquifer system, aquifer topography directs groundwater flow towards the LYG (N-S and S-N). Once groundwaters reach the zone of hydraulic anisotropy the direction is diverted westwards, towards the Lower Jordan Valley. A final finding pointed to the inadequate size of the A7/B2 drainage basin south of the LYG as the Mukheibeh well field requires a larger drainage area. References Magri, F., Inbar, N., Siebert, C., Rosenthal, E., Guttman, J., Möller, P., 2015. Transient simulations of large-scale hydrogeological processes causing temperature and salinity anomalies in the Tiberias Basin. Journal of Hydrology 520, 342-355. Shalev, E., Malik, U., Lutzky, H., 2015, Monitoring and analysis of water levels and pumping data from Meizar wells, Geological Survey of Israel report, GSI/07/2015 (in Hebrew). Siebert, C., Möller, P., Geyer, S., Kraushaar, S., Dulski, P., Guttman, J., Subah, A., Rödiger, T., 2014. Thermal waters in the Lower Yarmouk Gorge and their relation to surrounding aquifers. Chemie der Erde - Geochemistry 74, 425-441

Surface water and groundwater water interaction model in catastrophic floods and mudslides in the beds of mountain rivers

NASA Astrophysics Data System (ADS)

Tulenev, Nikita

2014-05-01

Catastrophic floods and mudslides / mudflows are very dangerous disaster. Water volumes appear suddenly and continuously increasing in intensity and can spread with great speed, leading to catastrophic consequences - destruction and casualties [1]. These phenomena are typically nonlinear processes occurring in an open system with spatially distributed feedback [2]. Currently, most researchers consider as causes of such powerful water flows seasonal rapid melting of glaciers and intense rain showers. However, their localization is often in line with a separate small mountain river and dynamics of development raises a number of issues, primarily in connection with the justification of the amounts of water that are distributed on the surface and demonstrate the complex hydrodynamic behavior with obvious elements of self-organization. Highlights in this project we consider the interaction of groundwater and surface water by means of the transport system 3D - cracks. In this case there are, two types of emissions to the surface of groundwater - the flash and relatively protracted continuous replenishment of surface runoff due to smooth outpouring of underground streams. We rely on the concept, in which groundwater and surface water are not isolated systems, and is closely related to each other in the territory of a single watershed in the functioning of the overall transport system - 3D-network of cracks in the rock (visible manifestation of which is on the surface and the riverbed itself [3]). Evaluative analysis of groundwater discharge into the river channel can hold a first approximation, by analogy with the artesian well, working in a mode of self-flowing. And in a similar way as it is possible to calculate the pressure at the bottom of the well based on its flow rate, we can estimate the pressure in the aquifer based on the amount obtained by mudflow or flood. In the case of a violent release according to our calculations, such pressure can reach tens of atmospheres. Such pressure may be due to various external factors (including seismic character). In the event of a sharp increase in pressure under the influence of external factors, may occur short and violent eruption, which in mountainous terrain can form a mudflow. If pressure builds up gradually, which is more typical of the plains, the release can develop into increasing recharge the riverbed, which in turn may lead to flooding. Thus, even if a catastrophic flood / mudflow originally formed for other reasons - because of melting glaciers or intensive / heavy rains, the presence on its way sectors fed by groundwater can significantly strengthen it. If we talk about the comparison of these two models with the actual events taking place, the first time that may be associated with catastrophic flooding in Krymsk (July 2012.), And the second - the floods in the Amur River basin (September 2013) in Russia. It is necessary to take into account the spatial extent of these dynamic phenomena. Groundwater resources are essentially spatially distributed. For example, the size of many artesian basins, ranging from hundreds to hundreds of thousands of square kilometers. Thus, the influence on the behavior of groundwater can have events that occur from them at a considerable distance. In particular, are essential earthquake. Consideration of these tasks within the approaches of nonlinear physics can be very

Geologic context of large karst springs and caves in the Ozark National Scenic Riverways, Missouri

USGS Publications Warehouse

Weary, David J.; Orndorff, Randall C.

2016-01-01

The ONSR is a karst park, containing many springs and caves. The “jewels” of the park are large springs, several of first magnitude, that contribute significantly to the flow and water quality of the Current River and its tributaries. Completion of 1:24,000-scale geologic mapping of the park and surrounding river basin, along with synthesis of published hydrologic data, allows us to examine the spatial relationships between the springs and the geologic framework to develop a conceptual model for genesis of these springs. Based on their similarity to mapped spring conduits, many of the caves in the ONSR are fossil conduit segments. Therefore, geologic control on the evolution of the springs also applies to speleogenesis in this part of the southern Missouri Ozarks.Large springs occur in the ONSR area because: (1) the Ozark aquifer, from which they rise, is chiefly dolomite affected by solution via various processes over a long time period, (2) Paleozoic hypogenic fluid migration through these rocks exploited and enhanced flow-paths, (3) a consistent and low regional dip of the rocks off of the Salem Plateau (less than 2° to the southeast) allows integration of flow into large groundwater basins with a few discreet outlets, (4) the springs are located where the rivers have cut down into structural highs, allowing access to water from stratigraphic units deeper in the aquifer thus allowing development of springsheds that have volumetrically larger storage than smaller springs higher in the section, and (5) quartz sandstone and bedded chert in the carbonate stratigraphic succession that are locally to regionally continuous, serve as aquitards that locally confine groundwater up dip of the springs creating artesian conditions. This subhorizontal partitioning of the Ozark aquifer allows contributing areas for different springs to overlap, as evidenced by dye traces that cross adjacent groundwater basin boundaries, and possibly contributes to alternate flow routes under different groundwater flow regimes.A better understanding of the 3-dimensional hydrogeologic framework for the large spring systems in the ONSR allows more precise mapping of the contributing areas for those springs, will guide future studies of groundwater flow paths, and inform development of groundwater resource management strategies for the park.

Crospovidone interactions with water. II. Dynamic vapor sorption analysis of the effect of Polyplasdone particle size on its uptake and distribution of water.

PubMed

Saripella, Kalyan K; Mallipeddi, Rama; Neau, Steven H

2014-11-20

Polyplasdone of different particle size was used to study the sorption, desorption, and distribution of water, and to seek evidence that larger particles can internalize water. The three samples were Polyplasdone® XL, XL-10, and INF-10. Moisture sorption and desorption isotherms at 25 °C at 5% intervals from 0 to 95% relative humidity (RH) were generated by dynamic vapor sorption analysis. The three products provided similar data, judged to be Type III with a small hysteresis that appears when RH is below 65%. An absent rounded knee in the sorption curve suggests that multilayers form before the monolayer is completed. The hysteresis indicates that internally absorbed moisture is trapped as the water is desorbed and the polymer sample shrinks, thus requiring a lower level of RH to continue desorption. The fit of the Guggenheim-Anderson-de Boer (GAB) and the Young and Nelson equations was accomplished in the data analysis. The W(m), C(G), and K values from GAB analysis are similar across the three samples, revealing 0.962 water molecules per repeating unit in the monolayer. A small amount of absorbed water is identified, but this is consistent across the three particle sizes. Copyright © 2014 Elsevier B.V. All rights reserved.

Ground-water hydrology of the Cocoa well-field area, Orange County, Florida

USGS Publications Warehouse

Tibbals, C.H.; Frazee, J.M.

1976-01-01

The city of Cocoa, Brevard County, Florida, supplies water for much of central Brevard County including Cape Kennedy and Patrick Air Force Base. The water supply is obtained from a well field in east Orange County. Many of the easternmost wells in that well field yield salty water (chloride concentration greater than 250 milligrams per liter). The interface between the fresh and salty water in the west part of the well field occurs at a depth of about 1,400 feet. An upward hydraulic gradient exists between the the lower (salty) zones and the upper, or pumped zones of the Floridan aquifer in the west part of the well field. Secondary artesian aquifers in the well-field area are relatively high-yielding but are of limited areal extent. However, they are suitable as a source of water for supplemental supply or for artificially recharging the Floridan aquifer. Fresh water was transferred by siphon from a secondary artesian aquifer to the Floridan aquifer at 90 gallons per minute. Artificial recharge and recovery experiments show that it is feasible to retrieve fresh water stored in salty zones of the Floridan aquifer. (Woodard-USGS)

Hydrogeology of eastern Michaud Flats, Fort Hall Indian Reservation, Idaho

USGS Publications Warehouse

Jacobson, N.D.

1984-01-01

Groundwater in Michaud Flats, southeastern Idaho, is developed extensively for irrigation and industry. Extensive clay beds overlie the Bighole Basalt and Sunbeam Formation, which yield most of the water for irrigation and industrial wells; artesian aquifers in these rock units have heads below land surface and near those in the shallow water-table aquifer in the overlying Michaud Gravel. Transmissivities in artesian aquifers range from 19,6000 to 444,000 feet squared per day. High levels of arsenic were detected in groundwater in the Flats in 1972. During 1982, concentrations of arsenic twice exceeded the recommended drinking water limit of 50 micrograms per liter. Concentrations of other chemical constituents were generally within drinking water limits. Stable-isotope data suggest more than one source of aquifer recharge and indicate some mixing between waters from industrial ponds and local groundwater. Management alternatives are being implemented by two industries for control of groundwater contamination. These include reduction of effluent, installation of liners and leachate recovery systems in ponds, and removal and reclamation of precipitates in old slurry and evaporation ponds. Six sites will be monitored through 1985 to determine changes in groundwater chemistry and migration of contaminants. (USGS)

Hydrologic budgets for the Madison and Minnelusa aquifers, Black Hills of South Dakota and Wyoming, water years 1987-96

USGS Publications Warehouse

Carter, Janet M.; Driscoll, Daniel G.; Hamade, Ghaith R.; Jarrell, Gregory J.

2001-01-01

The Madison and Minnelusa aquifers are two of the most important aquifers in the Black Hills area of South Dakota and Wyoming. Quantification and evaluation of various hydrologic budget components are important for managing and understanding these aquifers. Hydrologic budgets are developed for two scenarios, including an overall budget for the entire study area and more detailed budgets for subareas. Budgets generally are combined for the Madison and Minnelusa aquifers because most budget components cannot be quantified individually for the aquifers. An average hydrologic budget for the entire study area is computed for water years 1987-96, for which change in storage is approximately equal to zero. Annual estimates of budget components are included in detailed budgets for nine subareas, which consider periods of decreasing storage (1987-92) and increasing storage (1993-96). Inflow components include recharge, leakage from adjacent aquifers, and ground-water inflows across the study area boundary. Outflows include springflow (headwater and artesian), well withdrawals, leakage to adjacent aquifers, and ground-water outflow across the study area boundary. Leakage, ground-water inflows, and ground-water outflows are difficult to quantify and cannot be distinguished from one another. Thus, net ground-water flow, which includes these components, is calculated as a residual, using estimates for the other budget components. For the overall budget for water years 1987-96, net ground-water outflow from the study area is computed as 100 ft3/s (cubic feet per second). Estimates of average combined budget components for the Madison and Minnelusa aquifers are: 395 ft3/s for recharge, 78 ft3/s for headwater springflow, 189 ft3/s for artesian springflow, and 28 ft3/s for well withdrawals. Hydrologic budgets also are quantified for nine subareas for periods of decreasing storage (1987-92) and increasing storage (1993-96), with changes in storage assumed equal but opposite. Common subareas are identified for the Madison and Minnelusa aquifers, and previous components from the overall budget generally are distributed over the subareas. Estimates of net ground-water flow for the two aquifers are computed, with net ground-water outflow exceeding inflow for most subareas. Outflows range from 5.9 ft3/s in the area east of Rapid City to 48.6 ft3/s along the southwestern flanks of the Black Hills. Net groundwater inflow exceeds outflow for two subareas where the discharge of large artesian springs exceeds estimated recharge within the subareas. More detailed subarea budgets also are developed, which include estimates of flow components for the individual aquifers at specific flow zones. The net outflows and inflows from the preliminary subarea budgets are used to estimate transmissivity of flow across specific flow zones based on Darcy?s Law. For estimation purposes, it is assumed that transmissivities of the Madison and Minnelusa aquifers are equal in any particular flow zone. The resulting transmissivity estimates range from 90 ft2/d to about 7,400 ft2/d, which is similar to values reported by previous investigators. The highest transmissivity estimates are for areas in the northern and southwestern parts of the study area, and the lowest transmissivity estimates are along the eastern study area boundary. Evaluation of subarea budgets provides confidence in budget components developed for the overall budget, especially regarding precipitation recharge, which is particularly difficult to estimate. Recharge estimates are consistently compatible with other budget components, including artesian springflow, which is a dominant component in many subareas. Calculated storage changes for subareas also are consistent with other budget components, specifically artesian springflow and net ground-water flow, and also are consistent with water-level fluctuations for observation wells. Ground-water budgets and flowpaths are especially complex i

Relationships between sinkholes areal distribution and main tectonic alignments in Abruzzo (Central Italy)

NASA Astrophysics Data System (ADS)

Ferrini, G.; Moretti, A.; De Rose, C.; Stagnini, E.,; Serafini, M.

2012-04-01

Intermountain basins, developed at the back side of the Apennines overturning front, are the most evident morphological expressions of extensional tectonics in Central Italy and can be recognized in many different sections of the chain. L'Aquila basin and the adjoining Subequana valley are part of a single NW-SE elongated depression (about 60 km long) which began to develop about in the early Quaternary in response to the identification of various regional extensional tectonic alignments and the consequent starting of the basin subsidence. This impressive morphological element is characterized by the presence of several large funnel-shaped features (locally named Fosse = trench) which affect mainly the Meso-Cenozoic carbonatic bedrock but also the Neogenic clastic sedimentary filling of the valley. Some of these last elements are often occupied by ponds or significant artesian water resurgences like the Sinizzo Lake where, during L'Aquila earthquake of April 6th 2009, the shores collapsed and strong microseismic activity, deep rumbles and flow rate changes were reported for the following months. The Fosse mapped in the L'Aquila basin have widths in the order of hundreds of meters, a considerable difference of elevation respect the rims and present a general morphology very close to that of the classic dissolution karst sinkholes. Their evolution/localization is strictly related to the active fault systems which controls also the main tracts of the relief; the low volume of residual sedimentary deposits within the depression, not comparable with the total volume of rock removed, indicates that surface karst dissolution phenomena are absent or secondary. The elevations of the floor of many Fosse are higher respect the actual flood plain depending on their age; in fact relict circular forms, recognizable at upper altitude on the relief slope, confirm that the phenomenon has been active for a considerable period of time. About the genesis of this features, even if at present there is no evidence of hydrothermal activity or gas diffusion, morphological and geostructural analogy with the hydrothermal field of San Vittorino (Rieti) suggest dissolution processes related to the rising of underground mineralized fluids (piping) and a subsequent collapse phase, in a classic sink-hole evolutionary model. To note the areal distribution of these elements developed in a narrow band , WNW-ESE oriented, running for about 40 km parallel back to the tectonic front of the Gran Sasso and coinciding, with good approximation, to the seismogenic source of the earthquake of April 6th 2009 and of the major historical earthquakes which hit the region. Geophysical survey carried out after the last strong seismic event pointed out the presence of large hidden cavities developed in the Neogene sedimentary filling of the L'Aquila basin confirming that the phenomenon cannot be considered exhausted; then a geochemical mapping of the all area is started to identify suitable sites for monitoring fluid in relation to seismic activity and to evaluate the risk of potential, sudden phenomena of gravitational collapse.

Thermal-Mechanical Fatigue Testing of a Titanium-Aluminide Alloy.

DTIC Science & Technology

1987-12-01

DIMSTRIBUTION STA Approved for pubi robing e% dQ *- AFIT/GAB/AA/87D-18 THERMAL-MECHANICAL FATIGUE TESTING OF A TITANIUM - ALUMINIDE ALLOY THESIS John J...THERMAL-MECHANICAL FATIGUE TESTING OF A TITANIUM - ALUMINIDE ALLOY THESIS Presented to the Faculty of the School of Engineering of the Air Force Institute...develop a Thermal-Mechanical Fatigue (TMF) testing system for titanium - aluminide compact tension specimens. I could not have accomplished this without the

A Multiscale Gradient Theory for Single Crystalline Elastoviscoplasticity

DTIC Science & Technology

2006-02-01

ferentiation with respect to the Levi - Civita connection on Bcur whose Christoffel symbols stem from the components of the metric gab of Eq. (6)3 and thus...denoting covariant differentiation with respect to the symmetric Levi – Civita connection on bref . Notice that Eq. (29) are applicable locally, for points...brevity, thermal effects (i.e., temperature rates and heat fluxes) and dynamic effects (i.e., acceleration and body forces) are often neglected. We employ

Met Nuclear Localization and Signaling in Breast Cancer

DTIC Science & Technology

2006-05-01

and in germinal regions of many tissues using 4 unique antibodies . Cell fractionation reveals a 60kDa band recognized by C-terminal Met antibodies ...cascades such as Gab1 , Grb2 and PI3K, leading to proliferation, scattering, increased motility, invasion and branching morphogenesis (reviewed in (2...Identification of Met antibodies for use on tissue microarray of normal and cancerous cells, Months 12-24 Task 2. Definition of the domain

HGF-independent regulation of MET and GAB1 by nonreceptor tyrosine kinase FER potentiates metastasis in ovarian cancer

PubMed Central

Fan, Gaofeng; Zhang, Siwei; Gao, Yan; Greer, Peter A.; Tonks, Nicholas K.

2016-01-01

Ovarian cancer cells disseminate readily within the peritoneal cavity, which promotes metastasis, and are often resistant to chemotherapy. Ovarian cancer patients tend to present with advanced disease, which also limits treatment options; consequently, new therapies are required. The oncoprotein tyrosine kinase MET, which is the receptor for hepatocyte growth factor (HGF), has been implicated in ovarian tumorigenesis and has been the subject of extensive drug development efforts. Here, we report a novel ligand- and autophosphorylation-independent activation of MET through the nonreceptor tyrosine kinase feline sarcoma-related (FER). We demonstrated that the levels of FER were elevated in ovarian cancer cell lines relative to those in immortalized normal surface epithelial cells and that suppression of FER attenuated the motility and invasive properties of these cancer cells. Furthermore, loss of FER impaired the metastasis of ovarian cancer cells in vivo. Mechanistically, we demonstrated that FER phosphorylated a signaling site in MET: Tyr1349. This enhanced activation of RAC1/PAK1 and promoted a kinase-independent scaffolding function that led to recruitment and phosphorylation of GAB1 and the specific activation of the SHP2–ERK signaling pathway. Overall, this analysis provides new insights into signaling events that underlie metastasis in ovarian cancer cells, consistent with a prometastatic role of FER and highlighting its potential as a novel therapeutic target for metastatic ovarian cancer. PMID:27401557

MAPK pathway inhibition induces MET and GAB1 levels, priming BRAF mutant melanoma for rescue by hepatocyte growth factor

PubMed Central

Caenepeel, Sean; Cooke, Keegan; Wadsworth, Sarah; Huang, Guo; Robert, Lidia; Moreno, Blanca Homet; Parisi, Giulia; Cajulis, Elaina; Kendall, Richard; Beltran, Pedro; Ribas, Antoni; Coxon, Angela; Hughes, Paul E.

2017-01-01

Therapeutic resistance is a major obstacle to achieving durable clinical responses with targeted therapies, highlighting a need to elucidate the underlying mechanisms responsible for resistance and identify strategies to overcome this challenge. An emerging body of data implicates the tyrosine kinase MET in mediating resistance to BRAF inhibitors in BRAFV600E mutant melanoma. In this study we observed a dominant role for the HGF/MET axis in mediating resistance to BRAF and MEK inhibitors in models of BRAFV600E and NRAS mutant melanoma. In addition, we showed that MAPK pathway inhibition induced rapid increases in MET and GAB1 levels, providing novel mechanistic insight into how BRAFV600E mutant melanoma is primed for HGF-mediated rescue. We also determined that tumor-derived HGF, not systemic HGF, may be required to convey resistance to BRAF inhibition in vivo and that resistance could be reversed following treatment with AMG 337, a selective MET inhibitor. In summary, these findings support the clinical evaluation of MET-directed targeted therapy to circumvent resistance to BRAF and MEK inhibitors in BRAFV600E mutant melanoma. In addition, the induction of MET following treatment with BRAF and MEK inhibitors has the potential to serve as a predictive biomarker for identifying patients best suited for MET inhibitor combination therapy. PMID:28147313

Recent Advances in Radar Polarimetry and Polarimetric SAR Interferometry

DTIC Science & Technology

2005-02-01

Hensley, H. A. Zebker, F. H. Webb, and E. Fielding, 1996, "Surface deformation and coherence measurements of Kilauea Volcano , Hawaii from SIR-C radar...topography, tectonic surface deformation, bulging and subsidence (earthquakes, volcanoes , geo-thermal fields and artesian irrigation, ice fields), glacial...J.J. and Y-J. Kim, 2000, "The relationship between radar polarimetric and interferometric phase," Presented at IGARSS�, Honolulu, Hawaii , July

Hydrologic data from monitoring of saline-water intrusion in the Cape Coral area, Lee County, Florida

USGS Publications Warehouse

Fitzpatrick, D.J.

1982-01-01

As a result of declining water levels and saltwater intrusion in the Cape Coral area, the U.S. Geological Survey, in cooperation with the City of Cape Coral, established a monitor well network in Cape Coral and adjacent areas in 1978. The network was designed to monitor water levels and water quality, to collect background data from water-bearing zones in the upper and lower parts of the Hawthorn Formation, the upper part of the Tampa Formation, and the surficial aquifer. A network of 34 wells tapping the artesian freshwater-bearing aquifer in the upper part of the Hawthorn Formation was established, and water-quality samples were collected and analyzed semiannually from 1978-80. Water levels in selected wells were monitored continuously or measured monthly, bimonthly, or semiannually for general trends. Thirty-six wells tapping the surficial and six wells tapping the artesian aquifer in the lower part of the Hawthorn Formation were constructed. Selected wells in these aquifers have also been monitored for water levels continuously, or at monthly, bimonthly, or semiannual intervals. Water-quality data were collected from selected wells for background information. Lithologic logs were prepared for 18 wells penetrating one or more of the three aquifers. (USGS)

Hydrologic sections through Lee County and adjacent areas of Hendry and Collier counties, Florida

USGS Publications Warehouse

Boggess, Durward H.; Missimer, T.M.; O'Donnell, T. H.

1981-01-01

The freshwater underlying Lee, western Hendry, and northern Collier Counties occurs within the marine terrace sands, the Fort Thompson, Caloosahatchee, Tamiami, and Hawthorn Formations. These are, respectively, the water-table aquifer, an aquifer in the Tamiami Formation, and an aquifer in the upper part of the Hawthorn Formation. These aquifers are separated by clay, marl, and marly limestone. Wells tapping the water-table aquifer are commonly less than 50 feet deep, with yields ranging from 5 to 500 gallons per minute. The water quality in the aquifer is usually good, except for iron, which generally exceeds 1 milligram per liter, and color, which ranges from 30 to 600 Platinum-Cobalt units. Wells tapping the Tamiami aquifer range in depth from about 60 to 300 feet; most are less than 100 feet deep. Yields range from 20 to 500 gallons per minute. The water quality in the Tamiami aquifer is good, except where affected by leakage from deep artesian wells. Wells tapping the upper Hawthorn aquifer range in depth from about 100 to 300 feet. Yields range from 10 to 500 gallons per minute. The water quality from the upper Hawthorn aquifer is good, except in areas where upward leakage from the deep artesian aquifer has occurred. (USGS)

Occurrence and use of ground water in the Venice-Englewood area, Sarasota and Charlotte counties, Florida

USGS Publications Warehouse

Sutcliffe, Horace; Thompson, Thomas H.

1983-01-01

In a 75-square-mile area of coastal Sarasota and Charlotte Counties, demand for water is increasing. Groundwater, the principal source of supply, is distributed largely by public water systems. Principal water-bearing formations in descending order, include the surficial aquifer, artesian zone 1 in the Tamiami Formation, zone 2 in the upper part of the Hawthorn Formation, zone 3 in the lower part of the Hawthorn Formation and upper part of the Tampa Limestone, and zones 4 and 5 which comprise the Floridan aquifer. The surficial aquifer, except near tidewater, provides limited supplies of freshwater to wells. Artesian zone 1 is the major aquifer for public supply. It is contaminated by saline water in some areas, either as a result of inundation by storm-driven tides or by upwar leakage of mineralized water from underlying aquifers through uncased or improperly constructed wells. The city of Venice obtains some water from zone 2, but the water is brackish in much of the area. The water is suitable for irrigation in parts of the area. Except for local use of water for watering livestock and maintaining ponds, the water from zones 3, 4, and 5 is little used because of its poor quality. (USGS)

Colwellia psychrerythraea strains from distant deep sea basins show adaptation to local conditions

DOE PAGES

Techtmann, Stephen M.; Fitzgerald, Kathleen S.; Stelling, Savannah C.; ...

2016-05-09

Many studies have shown that microbes, which share nearly identical 16S rRNA genes, can have highly divergent genomes. Microbes from distinct parts of the ocean also exhibit biogeographic patterning. Here in this study we seek to better understand how certain microbes from the same species have adapted for growth under local conditions. The phenotypic and genomic heterogeneity of three strains of Colwellia psychrerythraea was investigated in order to understand adaptions to local environments. Colwellia are psychrophilic heterotrophic marine bacteria ubiquitous in cold marine ecosystems. We have recently isolated two Colwellia strains: ND2E from the Eastern Mediterranean and GAB14E from themore » Great Australian Bight. The 16S rRNA sequence of these two strains were greater than 98.2% identical to the well-characterized C. psychrerythraea 34H, which was isolated from arctic sediments. Salt tolerance, and carbon source utilization profiles for these strains were determined using Biolog Phenotype MicoArrays. These strains exhibited distinct salt tolerance, which was not associated with the salinity of sites of isolation. The carbon source utilization profiles were distinct with less than half of the tested carbon sources being metabolized by all three strains. Whole genome sequencing revealed that the genomes of these three strains were quite diverse with some genomes having up to 1600 strain-specific genes. Many genes involved in degrading strain-specific carbon sources were identified. Finally, there appears to be a link between carbon source utilization and location of isolation with distinctions observed between the Colwellia isolate recovered from sediment compared to water column isolates.« less

Estimation of Metal Acceleration by an SF5 Containing Explosive

DTIC Science & Technology

1991-06-30

cylinder wall acceleration, the wall energies for the baseline composition and for the composition CW2 were calculated by three different methods : KSM, 6...computaticno! method to calculate the cylinder energies needed for comparison with expermental data, it was decided to compare data from three known methods ...detonation pressure given for the GAB method in Reference 8. They are E(6mm) = 0.1272 (Isp X density)1 .5 - 0.021, and E(l9mm) = 0.1580 (Isp x density) 1 .5

A Micro-Computer Based Decision Support System for Response Surface Methodology

DTIC Science & Technology

1990-03-01

d = -(a+em) *(gab+en)*x/ ((a+tem) *(qap+tem)); app = ap+d*az; bpp = bp+d*bz; aold = az; am = ap/ bpp ; bm = bp/ bpp ; az = app/ bpp ; bz = 1.0; if (( fabs (az...x = x+one; ser = ser+cof[j]/x; ) return (tmp+log(stp*ser));) double betacf(a,b,x) double a, b, x; ( double tem,qapqam,qab,em,d; double bz, bpp ,bp,bm...aold)) < (eps* fabs (az))) goto done; printf("lpause in BETACF\

Dana-Farber Cancer Institute: Discovery of Novel Oncogenes | Office of Cancer Genomics

Cancer.gov

Widespread recurrent copy number alterations are observed across the majority of human cancers, yet the specific targets of such amplified or deleted regions remain undefined. Here, the CTD2 Center at the Dana Farber Cancer Institute took a systematic approach using cDNA overexpression screening to identify and validate oncogenes residing in such amplified regions. In representative examples, these experiments have identified the adaptor proteins CRKL, GAB2, FRS2 and the TLOC and SKIL proteins as novel amplified oncogenes.

Genomic and Expression Profiling of Benign and Malignant Nerve Sheath Tumors in Neurofibromatosis Patients

DTIC Science & Technology

2005-05-01

3.2042 3164754 GAB1 GRB2-associated binding protein 1 Hs.80720 3.2026 3.58551 CAV2 Caveolin 2 Hs.212332 3.2012 2.83580 FLJ20481 Hypothetical protein...Development of in situ hybridization probes. - Testing antibodies by immunohistochemistry. REPORTABLE OUTCOMES: So far we have been in data acquisition...collaborator Dr. Torsten Nielsen at the University of British Columbia has been successful in finding an antibody against all forms of TLE (based on our gene

The Budgetary Effects of the United States Participation in the International Monetary Fund

DTIC Science & Technology

2016-06-01

to policymakers and the general public. Proponents of the fair-value approach counter that deci- sions about spending the public’s money should take...member countries, which it must repay, and the amounts owed to members that have lent money to the organiza- tion under the NAB, the GAB, or separate...granted Liberia debt relief in 2010, so it never repaid those new IMF loans in full.1 Because of the relatively small amount of money involved

On the impact of spatial heterogeneous permeability distributions on the development of free convection cells in the Perth Basin, Australia.

NASA Astrophysics Data System (ADS)

Niederau, Jan; Ebigbo, Anozie; Freitag, Sebastian; Marquart, Gabriele; Clauser, Christoph

2014-05-01

Recent increase in exploration of the geothermal energy potential of the Perth Metropolitan Area (PMA) results in the need for reliable and robust reservoir models in order to explore rock properties and temperature distributions in the subsurface, where free convection in the main reservoir (Yarragadee Aquifer) is likely to occur [1]. While the structure of the Perth Basin has been refined recently, the heterogeneity and spatial complexity of permeability was up till now mainly neglected. An integrated, three dimensional tectonostratigraphic model of the PMA is constructed, using the modeling software '3D GeoModeller' and data of numerous artesian and petroleum wells. Comprising the region around the city of Perth, the model covers an area of about 5000 km2 up to a depth of 4.5 km, with focus on adequate representation of the main reservoir. We further construct a numerical model for fluid flow and heat transport in the Yarragadee Aquifer. Porosity distributions are deduced from well logs and linked to permeability by a calibrated correlation, based on a fractal approach. Three different cases are simulated using the FD code SHEMAT-Suite, in order to assess the influence of spatial heterogeneity of porosity and permeability on the development of free convection cells. constant porosity and permeability for the entire aquifer porosity and permeability decreasing with depth, thus reflecting compaction a conditional random permeability field within prescribed limits and for given correlation length In order to improve understanding of model correctness, as well as identification and comparison of convection cells in different simulations, we are developing a specialized visualization tool tailored to this purpose. The three different scenarios show distinctions in the distribution of convection cells. Where the Yarragadee Aquifer is in contact with overlying aquifers, regions of downflow develop. These in turn have a strong impact on the regional flow field and therefore temperature. The heterogeneous distribution of permeability seems to control the convection pattern on a smaller scale. References [1] Schilling, O., Sheldon, H.A., Reid, L.B., Corbel, S. 2013. Hydrothermal models of the Perth metropolitan area, Western Australia: implications for geothermal energy. Hydrogeology Journal, Vol. 21, 605-621.

Using Geophysics to Define Hydrostratigraphic Units in the Edwards and Trinity Aquifers, Texas

NASA Astrophysics Data System (ADS)

Smith, B. D.; Blome, C. D.; Clark, A. K.; Kress, W.; Smith, D. V.

2007-05-01

Airborne and ground geophysical surveys conducted in Uvalde, Medina, and northern Bexar counties, Texas, can be used to define and characterize hydrostratigraphic units of the Edwards and Trinity aquifers. Airborne magnetic surveys have defined numerous Cretaceous intrusive stocks and laccoliths, mainly in Uvalde County, that influence local hydrology and perhaps regional ground-water flow paths. Depositional environments in the aquifers can be classified as shallow water platforms (San Marcos Platform, Edwards Group), shoal and reef facies (Devils River Trend, Devils River Formation), and deeper water basins (Maverick Basin, West Nueces, McKnight, and Salmon Peak Formations). Detailed airborne and ground electromagnetic surveys have been conducted over the Edwards aquifer catchment zone (exposed Trinity aquifer rocks), recharge zone (exposed Edwards aquifer rocks), and artesian zone (confined Edwards) in the Seco Creek area (northeast Uvalde and Medina Counties; Devils River Trend). These geophysical survey data have been used to divide the Edwards exposed within the Balcones fault zone into upper and lower hydrostratigraphic units. Although both units are high electrical resistivity, the upper unit has slightly lower resistivity than the lower unit. The Georgetown Formation, at the top of the Edwards Group has a moderate resistivity. The formations that comprise the upper confining units to the Edwards aquifer rocks have varying resistivities. The Eagleford and Del Rio Groups (mainly clays) have very low resistivities and are excellent electrical marker beds in the Seco Creek area. The Buda Limestone is characterized by high resistivities. Moderate resistivities characterize the Austin Group rocks (mainly chalk). The older Trinity aquifer, underlying the Edwards aquifer rocks, is characterized by less limestone (electrically resistive or low conductivity units) and greater quantities of mudstones (electrically conductive or low resistivity units). In the western area (Devils River Trend and Maverick Basin) of the Trinity aquifer system there are well-defined collapse units and features that are marked by moderate resistivities bracketed by resistive limestone and conductive mudstone of the Glen Rose Limestone. In the central part of the aquifer (San Marcos Platform) the Trinity's lithologies are divided into upper and lower units with further subdivisions into hydrostratigraphic units. These hydrostratigraphic units are well mapped by an airborne electromagnetic survey in Bexar County. Electrical properties of the Edwards aquifer also vary across the fresh-saline water interface where ground and borehole electrical surveys have been conducted. The saline- saturated Edwards is predictably more conductive than the fresh-water saturated rocks. Similar fresh-saline water interfaces exist within the upper confining units of the Edwards aquifer (Carrizo-Wilcox aquifer) and the Trinity aquifer rocks.

Understanding High Temperature Gradients in the Buckman Well Field, Santa Fe County, New Mexico

NASA Astrophysics Data System (ADS)

Folsom, M.; Gulvin, C. J.; Tamakloe, F. M.; Yauk, K.; Kelley, S.; Frost, J.; Jiracek, G. R.

2014-12-01

We propose a conceptual model to explain elevated thermal gradients, localized laterally over a few 100 m, discovered during the SAGE program in 2013 and confirmed in 2014 at the Buckman water well field in the Española Basin of north central New Mexico. The anomalous gradients of temperature with depth, dT/dz, exceed 70 ºC/km and are found in three shallow (< 100 m-deep) USGS monitoring wells close to the Rio Grande. A temperature increase of only 3 - 4 ºC at ~100 m depth would elevate the regional temperature value enough to yield the anomalous dT/dz values in the upper ~100 m. The coincidence of a 25 km2 region of InSAR-confirmed subsidence with the locally anomalous dT/dz region suggests a way to achieve a higher temperature at ~ 100 m depth. The mechanism is an isothermal release of warmer water from ~ 200 m depth along a fissure or reactivated fault. A fourth well, 290 m away, has a temperature gradient of only 33ºC/km in the upper 100 m and a distinctly different geochemical profile, suggesting aquifer compartmentalization and possible faulting close to the anomaly. In 2001 a 800 m-long surface scarp with up to 0.2 m offset appeared 2 km to the east in response to over-pumping that depressed the groundwater table by over 100 m. Such drawdown is expected to have 2 - 5 m of compaction with attendant movement along faults or fissures. This could allow groundwater to be released upward isothermally until encountering an unbreached aquitard where it would establish an elevated thermal boundary. Besides the local thermal anomaly, we have temperature-logged deeper water wells in the area. These and other measurements have been used to construct cross-sections of isotherms across the Española Basin along the groundwater flow units (GFUs). This allows comparison of the local thermal anomaly with classic, regional, basin hydrological models. For example, the fully-screened Skillet well, 2.3 km from the anomaly, shows a classic concave down dT/dz form indicating upwelling water. This is consistent with the regional hydraulic head and historical accounts of artesian wells pre-dating Buckman pumping. We quantified the upwelling by Péclet number analysis to be 0.076 - 0.11 m/yr. Numerical modeling using the TOUGH2 computer code is proceeding to further understand regional and local subsurface groundwater flow patterns and dT/dz values.

Topography of Valles Marineris: Implications for erosional and structural history

NASA Technical Reports Server (NTRS)

Lucchitta, B. K.; Isbell, N. K.; Howington-Kraus, A.

1994-01-01

Compilation of a simplified geologic/geomorphic map onto digital terrain models of the Valles Marineris permitted an evaluation of elevations in the vicinity of the troughs and the calculation of depth of troughs below surrounding plateaus, thickness of deposits inside the troughs, volumes of void spaces above geologic/geomorphic units, and volumes of deposits. The central troughs north Ophir, north and central Candor, and north Melas Chasmata lie as much as 11 km below the adjacent plateaus. In Ophir and Candor chasmata, interior layered deposits reach 8 km in elevation. If the deposits are lacustrine and if all troughs were interconnected, lake waters standing 8 km high would have spilled out of Coprates Chasma onto the surrounding plateaus having surface elevations of only 4-5 km. On the other hand, the troughs may not have been interconnected at the time of interior-deposit emplacement; they may have formed isolated ancestral basins. The existence of such basins is supported by independent structural and stratigraphic evidence. The ancestral basins may have eventually merged, perhaps through renewed faulting, to form northern subsidiary troughs in Ophir and Candor Chasmata and the Coprates/north Melas/Ius graben system. The peripheral troughs are only 2-5 km deep, shallower than the central troughs. Chaotic terrain is seen in the peripheral troughs near a common contour level of about 4 km on the adjacent plateaus, which supports the idea of release of water under artesian pressure from confined aquifers. The layered deposits in the peripheral troughs may have formed in isolated depressions that harbored lakes and predated the formation of the deep outflow channels. (If these layered deposits are of volcanic origin, they may have been emplaced beneath ice in the manner of table mountains.) Areal and volumetric computations show that erosion widened the troughs by about one-third and that deposits occupy one-sixth of the interior space. Even though the volume eroded is larger than the volume deposited, topographic and geologic considerations imply that material eroded from trough walls was probably part of the interior layered deposits but not their sole source. Additional material may have come from subterranean piping, from reworking of local disintegration products on the floors, such as chaotic materials, or from eolian influx. But overall it is likely that the additional material is volcanic and that it forms mostly the upper, more diversely bedded layers of the interior deposits.

Development and characterization of a new encapsulating agent from orange juice by-products.

PubMed

Kaderides, Kyriakos; Goula, Athanasia M

2017-10-01

The replacement of maltodextrins as carriers for the spray drying of sticky and sugar based bioactives is an important development for the food industry. In this work, orange juice industry by-product was used to obtain a high dietary fiber powder to be used as carrier material. This powder was characterized with respect to its physical and chemical properties related to the process of encapsulation by spray drying. Adsorption isotherms of orange waste powder were determined at 30, 45, and 60°C. The data were fitted to several models including two-parameter (BET, Halsey, Smith, and Oswin), three-parameter (GAB), and four-parameter (Peleg) relationships. The GAB model best fitted the experimental data. The isosteric heat of sorption was determined from the equilibrium sorption data using the Clausius-Clapeyron equation. Isosteric heats of sorption were found to decrease exponentially with increasing moisture content. The enthalpy-entropy compensation theory was applied to the sorption isotherms and indicated an enthalpy controlled sorption process. Glass transition temperatures (T g ) of orange waste powder conditioned at various water activities were determined and a strong plasticizing effect of water on T g was found. These data were satisfactory correlated by the Gordon and Taylor model. The critical water activity and moisture content for the orange waste powder were 0.82 and 0.18g water/g solids, respectively, at a storage temperature of 25°C. Copyright © 2017 Elsevier Ltd. All rights reserved.

Measurement of Epidermal Growth Factor Receptor-Derived Signals Within Plasma Membrane Clathrin Structures.

PubMed

Lucarelli, Stefanie; Delos Santos, Ralph Christian; Antonescu, Costin N

2017-01-01

The epidermal growth factor (EGF) receptor (EGFR) is an important regulator of cell growth, proliferation, survival, migration, and metabolism. EGF binding to EGFR triggers the activation of the receptor's intrinsic kinase activity, in turn eliciting the recruitment of many secondary signaling proteins and activation of downstream signals, such as the activation of phosphatidylinositol-3-kinase (PI3K) and Akt, a process requiring the phosphorylation of Gab1. While the identity of many signals that can be activated by EGFR has been revealed, how the spatiotemporal organization of EGFR signaling within cells controls receptor outcome remains poorly understood. Upon EGF binding at the plasma membrane, EGFR is internalized by clathrin-mediated endocytosis following recruitment to clathrin-coated pits (CCPs). Further, plasma membrane CCPs, but not EGFR internalization, are required for EGF-stimulated Akt phosphorylation. Signaling intermediates such as phosphorylated Gab1, which lead to Akt phosphorylation, are enriched within CCPs upon EGF stimulation. These findings indicate that some plasma membrane CCPs also serve as signaling microdomains required for certain facets of EGFR signaling and are enriched in key EGFR signaling intermediates. Understanding how the spatiotemporal organization of EGFR signals within CCP microdomains controls receptor signaling outcome requires imaging methods that can systematically resolve and analyze the properties of CCPs, EGFR and key signaling intermediates. Here, we describe methods using total internal reflection fluorescence microscopy imaging and analysis to systematically study the enrichment of EGFR and key EGFR-derived signals within CCPs.

Crk synergizes with epidermal growth factor for epithelial invasion and morphogenesis and is required for the met morphogenic program.

PubMed

Lamorte, Louie; Rodrigues, Sonia; Naujokas, Monica; Park, Morag

2002-10-04

Activation of the Met receptor tyrosine kinase through its ligand, hepatocyte growth factor, stimulates cell spreading, cell dispersal, and the inherent morphogenic program of various epithelial cell lines. Although both hepatocyte growth factor and epidermal growth factor (EGF) can activate downstream signaling pathways in Madin-Darby canine kidney epithelial cells, EGF fails to promote the breakdown of cell-cell junctional complexes and initiate an invasive morphogenic program. We have undertaken a strategy to identify signals that synergize with EGF in this process. We provide evidence that the overexpression of the CrkII adapter protein complements EGF-stimulated pathways to induce cell dispersal in two-dimensional cultures and cell invasion and branching morphogenesis in three-dimensional collagen gels. This finding correlates with the ability of CrkII to promote the breakdown of adherens junctions in stable cell lines and the ability of EGF to stimulate enhanced Rac activity in cells overexpressing CrkII. We have previously shown that the Gab1-docking protein is required for branching morphogenesis downstream of the Met receptor. Consistent with a role for CrkII in promoting EGF-dependent branching morphogenesis, the binding of Gab1 to CrkII is required for the branching morphogenic program downstream of Met. Together, our data support a role for the CrkII adapter protein in epithelial invasion and morphogenesis and underscores the importance of considering the synergistic actions of signaling pathways in cancer progression.

Water levels in major artesian aquifers of the New Jersey Coastal Plain, 1983

USGS Publications Warehouse

Eckel, J.A.; Walker, R.L.

1986-01-01

Water levels and changes in water levels in the major aquifers of the New Jersey Coastal Plain are documented. Water levels in 1,071 wells were measured in 1983, and are compared with 827 water level measurements made in the same wells in 1978. Increased groundwater withdrawals from the major artesian aquifers that underlie the New Jersey Coastal Plain have caused large cones of depression in the artesian heads. These cones are delineated on detailed potentiometric surface maps based on water level data collected in the fall of 1983. Hydrographs from observation wells show trends of water levels for the 6-year period of 1978 through 1983. The Potomac-Raritan-Magothy aquifer system is divided into the lower, middle, and upper aquifers. The potentiometric surfaces in these aquifers form large cones of depression centered in the Camden and Middlesex-Monmouth County areas. Measured water levels declined as much as 23 ft in these areas for the period of study. The lowest levels are 96 ft below sea level in Camden County and 91 ft below sea level in the Middlesex-Monmouth County area. Deep cones of depression in coastal Monmouth and Ocean counties in both the Englishtown aquifer system and Wenonah-Mount Laurel aquifer are similar in location and shape. This is because of an effective hydraulic connection between these aquifers. Measured water levels declined as much as 29 ft in the Englishtown aquifer system and 21 ft in the Wenonah-Mount Laurel aquifer during the period of study. The lowest levels are 249 ft below sea level in the Englishtown aquifer system and 196 ft below sea level in the Wenonah-Mount Laurel aquifer. Water levels in the Piney Point aquifer are as low as 75 ft below sea level at Seaside Park, Ocean County and 35 ft below sea level in southern Cumberland County. Water levels in Cumberland County are affected by large withdrawals of groundwater in Kent County, Delaware. Water levels in the Atlantic City 800 ft sand of the Kirkwood Formation define an extensive elongated cone of depression. Water levels are as low as 76 ft below sea level near Margate and Ventnor, Atlantic County. Measured water levels declined as much as 9 ft in the coastal region between Cape May County and Ocean County for the period of study. (Author 's abstract)

Translations on Near East and North Africa, Number 1852

DTIC Science & Technology

1978-10-04

on inadequate artesian wells or bring water in tanker trucks from Bi’r al-Sab’ daily. On the other hand, the Israeli authorities have set up...of Bedouins for Their Lands in Negev Desert Outlined (AL-DUSTUR, 10 Jul 78) 33 Past Experience of Foreign Ministry’s New Director General...achieve a better mutual understanding of the well -known problems, instead of jointly attacking the search for solutions—this does not augur well for

Effectiveness of pilot connector well in artificial recharge of the Floridan aquifer, western Orange County, Florida

USGS Publications Warehouse

Watkins, Frank A.

1977-01-01

A connector well pilot installation, in continuous operation in western Orange County since December 4, 1970, was transferring water from the lower of two shallow sand aquifers to the Floridan aquifer at a rate of 13 gallons per minute when measured on September 23, 1971. The recharge water is untreated and analyses show it to be chemically and physically compatible with the water in the Floridan aquifer. The temperatures of the recharging and receiving waters were identical, 23 deg C. The transfer of water from the lower sand aquifer to the Floridan aquifer caused only a small buildup of artesian pressure in the Floridan aquifer but it lowered the artesian head 4 feet in the lower sand aquifer near the well which supplied the recharge water. Water levels in the upper sand aquifer were not affected, probably because of the low permeability of an intervening hardpan layer. However, after six auger holes back-filled with sand connected the two sand aquifers on April 5, 1972, a rise of water levels in the lower sand aquifer was noted. The principal chemical and physical effects on the water in the Floridan aquifer were a general improvement in chemical quality and an increase in color. The color may decrease as more water moves through the sand aquifer and the material responsible for the high color is removed by flushing. (Woodard-USGS)

Natural iodine-129 as an environmental tracer

NASA Astrophysics Data System (ADS)

Fabryka-Martin, J.; Bentley, H.; Elmore, D.; Airey, P. L.

1985-02-01

Iodine-129 ( t 1/2, 16 My) is a naturally-occurring tracer which can be used to study hydrologic and geologic processes on time scales up to 100 My. The pre-bomb atmospheric ratio 129I /I should have been constant in time and space and is the starting value in ground-water recharge. Subsequent ratio changes in ground water should be determined by isotope contributions from three sources: recharge water, iodine leached from the formation, and in situ uranium fission. The mathematical expression of these time-dependent processes forms the basis for dating and tracing applications. The expected behavior of natural 129I in ground water is compared to results from field studies. Ground-water samples from the Great Artesian Basin, Australia, provide an estimate of the atmospheric equilibrium ratio, 6 × 10 -13. Down-gradient changes in water up to 1 My old suggest that subsurface production can be significant. The usefulness of 129I as an indicator of brine source and age is verified in brines collected in and around Louisiana salt domes. The method leads to ages of 7 and 9 My for two brine pockets trapped within Jurassic salt, and 32 to >40 My for oil-field brines in Miocene sands adjacent to the domes. The results demonstrate the capability of tandem accelerator mass spectrometry to measure as few as 10 7 atoms of 129I in 10 mg I with 10% precision. Although such atom sensitivity can be achieved otherwise, the accelerator technique is necessary to measure naturally low pre-1945 cosmogenic isotope ratios.

River infiltration to a subtropical alluvial aquifer inferred using multiple environmental tracers

NASA Astrophysics Data System (ADS)

Lamontagne, S.; Taylor, A. R.; Batlle-Aguilar, J.; Suckow, A.; Cook, P. G.; Smith, S. D.; Morgenstern, U.; Stewart, M. K.

2015-06-01

Chloride (Cl-), stable isotope ratios of water (δ18O and δ2H), sulfur hexafluoride (SF6), tritium (3H), carbon-14 (14C), noble gases (4He, Ne, and Ar), and hydrometry were used to characterize groundwater-surface water interactions, in particular infiltration rates, for the Lower Namoi River (New South Wales, Australia). The study period (four sampling campaigns between November 2009 and November 2011) represented the end of a decade-long drought followed by several high-flow events. The hydrometry showed that the river was generally losing to the alluvium, except when storm-derived floodwaves in the river channel generated bank recharge—discharge cycles. Using 3H/14C-derived estimates of groundwater mean residence time along the transect, infiltration rates ranged from 0.6 to 5 m yr-1. However, when using the peak transition age (a more realistic estimate of travel time in highly dispersive environments), the range in infiltration rate was larger (4-270 m yr-1). Both river water (highest δ2H, δ18O, SF6, 3H, and 14C) and an older groundwater source (lowest δ2H, δ18O, SF6, 3H, 14C, and highest 4He) were found in the riparian zone. This old groundwater end-member may represent leakage from an underlying confined aquifer (Great Artesian Basin). Environmental tracers may be used to estimate infiltration rates in this riparian environment but the presence of multiple sources of water and a high dispersion induced by frequent variations in the water table complicates their interpretation.

Saline-water intrusion related to well construction in Lee County, Florida

USGS Publications Warehouse

Boggess, Durward Hoye; Missimer, T.M.; O'Donnell, T. H.

1977-01-01

Ground water is the principle source of water supply in Lee County, Florida where an estimated 30,000 wells have been drilled since 1990. These wells ranges in depth from about 10 to 1,240 feet and tap the water table aquifer or one or more of the artesian water-bearing units or zones in the Tamiami Formation, the upper part of the Hawthorn Formation, the lower part of the Hawthorn Formation and the Tampa Limestone and the Suwannee Limestone. Before 1968, nearly all wells were constructed with galvanized or black iron pipe. Many of these wells are sources of saline-water intrusion into freshwater-bearing zones. The water-bearing zones in the lower part of the Hawthorn Formation, Tampa Limestone, and Suwannee Limestone are artesian-they have higher water levels and usually contain water with a higher concentration of dissolved solids than do the aquifers occurring at shallower depths. The water from these deeper aquifers generally range in dissolved solids concentration from about 1,500 to 2,400 mg/L, and in chloride from about 500 to 1,00 mg/L. A maximum chloride concentration of 15,200 mg/L has been determined. Few of the 3,00 wells estimated to have been drilled to these zones contain sufficient casing to prevent upward flow into overlaying water-bearing zones. Because of water-level differentials, upward movement and lateral intrusion of saline water occurs principally into the upper part of the Hawthorn Formation where the chloride concentrations in water unaffected by saline-water intrusion ranges from about 80 to 150 mg/L. Where intrusion from deep artesian zones has occurred, the chloride concentration in water from the upper part of the Hawthorn Formation ranges from about 300 to more than 2,100 mg/L Surface discharges of the saline water from wells tapping the lower part of the Hawthorn Formation and the Suwannee Limestone also had affected the water-table aquifer which normally contains water with 10 to 50 mg/L of chloride. In one area, the chloride concentration in water from the water table aquifer ranged from 200 to 590 mg/L as a result of intrusion. In areas adjacent to tidal-water bodies, the water table aquifer contains water that is very saline, Where the wells in such areas have been constructed with metal casings, the metal corrodes when exposed to the saline water, and many ultimately develop holes. This permits saline water to leak into the well where the water level in the well is lower than the water table. The intrusion of saline water from the water-table aquifer into the upper part of the Hawthorn Formation is a major problem in parts of Cape Coral. Withdrawal of water from the upper part of the Hawthorn Formation has caused water levels to decline below the lowest annual position of the water table, so that downward leakage is perennial. In some coastal areas, wells that tap the upper part of the Hawthorn Formation contain water whose chloride concentration is as much as 9,500 mg/L. Upward leakage of saline water from the deep artesian aquifers and downward leakage of saline water from the water-table aquifer can be prevented by proper well construction.

Identification and Targeting of Upstream Tyrosine Kinases Mediating PI3 Kinase Activation in PTEN Deficient Prostate Cancer

DTIC Science & Technology

2010-06-01

tyrosine phosphorylated proteins, but they were not recognized by an anti-pYxxM motif antibody and were not found in PTEN deficient PC3 PCa cells. LC/MS...p85 binding motif antibody (pYxxM). failed to detect Therefore, we next focused on identification of p85 associated proteins using liquid...LC/MS/MS analysis of the p85 immunoprecipitates using a more sensitive Orbitrap XL mass spectrometer, we also detected GAB1 (Table 1). However, we

Artesian pressures and water quality in Paleozoic aquifers in the Ten Sleep area of the Bighorn Basin, north-central Wyoming

USGS Publications Warehouse

Cooley, Maurice E.

1986-01-01

The major Paleozoic artesian aquifers, the aquifers most favorable for continued development, in the Ten Sleep area of the Bighorn Basin of Wyoming are the Tensleep Sandstone, the Madison Limestone and Bighorn Dolomite (Madison-Bighorn aquifer), and the Flathead Sandstone. The minor aquifers include the Goose Egg and Park City Formations (considered in the Ten Sleep area to be the lateral equivalent of the Phosphoria Formation) and the Amsden Formation. Most wells completed in the major and minor aquifers flow at the land surface. Wellhead pressures generally are less than 50 pounds per square inch for the Tensleep Sandstone, 150-250 pounds per square inch for the Madison-Bighorn aquifer, and more than 400 pounds per square inch for the Flathead Sandstone. Flowing wells completed in the Madison-Bighorn aquifer and the Flathead Sandstone yield more than 1,000 gallons per minute. The initial test of one well completed in the Madison-Bighorn aquifer indicated a flow rate of 14,000 gallons per minute. Transmissivities range from 500 to 1,900 feet squared per day for the Madison-Bighorn aquifer and from about 90 to 325 feet squared per day for the Tensleep and Flathead Sandstones. Significant secondary permeability from fracturing in the Paleozoic aquifers allows local upward interformational movement of water, and this affects the altitude of the potentiometric surfaces of the Tensleep Sandstone and the Madison-Bighorn aquifer. Water moves upward from the Tensleep and other formations, through the Goose Egg Formation, to discharge at the land surface as springs. Much of the spring flow is diverted for irrigation or is used for rearing fish. Decreases from original well pressures were not apparent in wells completed in the Tensleep Sandstone or in the Madison-Bighorn aquifer in the study area except for a few wells in or near the town of Ten Sleep. Most wells completed in the Flathead Sandstone, which also are open to the Madison-Bighorn aquifer, show a decrease of pressure from the time of completion to 1978. The decrease of pressure is partly the result of water moving from the Flathead Sandstone into the Madison-Bighorn aquifer, which has a lower potentiometric surface than does the Flathead Sandstone, even during the time the wells are not in operation. Pressure in some small-capacity wells completed in the Goose Egg Formation also has decreased near Ten Sleep. Most of the wells, particularly the irrigation wells, show a progressive decrease in pressure during the irrigation season but recover during periods of nonuse. Measurements of the pressure were made principally in 1953, 1962, 1970, and 1975-78. Well water from the Paleozoic aquifers generally contains minimal concentrations of dissolved solids and individual constituents but excessive hardness. Dissolved-solids concentrations of water are less than 300 milligrams per liter in the Tensleep Sandstone and the Madison-Bighorn aquifer, less than 200 milligrams per liter in the Flathead Sandstone, and as much as 450 milligrams per liter in the Goose Egg Formation. Bicarbonate is the major constituent, followed by calcium and magnesium. Relatively large concentrations of sulfate, as much as 490 milligrams per liter, were found, mainly in water from the Goose Egg Formation. The water has low sodium (alkali) and medium salinity; therefore, the water is satisfactory for irrigation and most other uses, if excessive hardness is not a detrimental factor. Wellhead temperatures range from 11 ? to 27.5 ? Celsius (51 ? to 81.5 ? Fahrenheit) within a range in depth of approximately 250 to 4,000 feet. This gives a geothermal gradient of about 0.44 ? Celsius per 100 feet (0.79 ? Fahrenheit per 100 feet).

Hydrology of the Upper Malad River basin, southeastern Idaho

USGS Publications Warehouse

Pluhowski, Edward J.

1970-01-01

The report area comprises 485 square miles in the Basin and Range physiographic province. It includes most of eastern' Oneida County and parts of Franklin, Bannock, and Power Counties of southeastern Idaho. Relief is about 5,000 feet; the floor of the Malad Valley is at an average altitude of about 4,400 feet. Agriculture is, by far, ,the principal economic .activity. In 1960 the population of the upper Malad River basin was about 3,600, of which about 60 percent resided in Malad City, the county seat of Oneida County. The climate is semiarid throughout the Malad Valley and its principal tributary valleys; ,above 6,500 feet the climate is subhumid. Annual precipitation ranges from about 13 inches in the lower Malad Valley to more than 30 inches on the highest peaks of the Bannock and Malad ranges. Owing to ,the normally clear atmospheric conditions, large daily and seasonal temperature fluctuations are common. Topography, distance from the Pacific Ocean, .and the general atmospheric circulation are the principal factors governing the climate of the Malad River basin. The westerlies transport moisture from the P.acific Ocean toward southeastern Idaho. The north-south tren4ing mountains flanking the basin are oriented orthogonally to the moisture flux so that they are very effective in removing precipitable water from the air. A minimum uplift of 6,000 feet is required to transport moisture from the Pacific source region; accordingly, most air masses are desiccated long before they reach the Malad basin. Heaviest precipitation is generally associated with steep pressure gradients in the midtroposphere that are so oriented as to cause a deep landward penetration of moisture from the Pacific Ocean. Annual water yields in the project area range from about 0.8 inch in the, lower Malad Valley to more than 19 inches on the high peaks north and east of Malad City. The mean annual water yield for the entire basin is 4 inches, or about 115,000 acre-feet. Evaporation is greatest in July when about 7 inches is lost from lakes, reservoirs, and waterlogged areas; losses from free-water surfaces may be as much .as 38 inches annually. An extensive ground-water reservoir consisting of sand and gravel interbedded with relatively impermeable beds of silt .and clay underlies much of the Malad Valley. Wells near the center of the valley exceeding 700 feet in depth do not reach bedrock. The Woodruff fault, which transects the constricted lower Malad Valley, is one of the main factors creating artesian conditions south of the latitude of Malad City. Recharge is obtained principally from mountain runoff which flows onto highly permeable alluvial fans surrounding the valley and from streams that flow across the valley floor. On the basis of a water balance analysis, under flow from the project area was estimated to be 28,000 acre-feet annually, surface-water outflow was 51,000 acre-feet, and transbasin imports were about 4,000 acre-feet. The principal tributaries of the Malad River are perennial along their upper and middle reaches and have well-sustained low flows. During the growing season, all surface water entering the Malad Valley is used for irrigation. Spine irrigation is practiced in the principal tributary valleys; however, a shortage of suitable reservoir sites has hampered surface-water development in these areas. The highly porous deposits underlying the Malad Valley tend to attenuate flood peaks. An unusual combination of meteorologic events early in 1962 effectively counteracted the high absorptive capacity of the valley and predisposed the basin to high flood risk. Subsequent rapid snowmelt combined with frozen ground produced the extraordinary flood of February 12, 1962. Calcium and bicarbonate commonly are the most abundant ions in the surface waters of the upper Malad River basin. In August 1967, the dissolved-solids content of streamflow ranged from 200 to 350 milligrams per liter in the middle and upper parts of the basin; however, much greater values were measured in the Malad River between Woddruff and Cherry Creek Lane. With the exception of that reach, the surface water of the project area is suitable for irrigating all but the most sensitive crops. The total water yield is not sufficient to meet all the water needs of the basin. A comprehensive water-management plan is required to ensure optimal use of the water resource.

Phosphoprotein profiles of candidate markers for early cellular responses to low-dose γ-radiation in normal human fibroblast cells

PubMed Central

Yim, Ji-Hye; Yun, Jung Mi; Kim, Ji Young; Lee, In Kyung; Nam, Seon Young

2017-01-01

Abstract Ionizing radiation causes biological damage that leads to severe health effects. However, the effects and subsequent health implications caused by exposure to low-dose radiation are unclear. The objective of this study was to determine phosphoprotein profiles in normal human fibroblast cell lines in response to low-dose and high-dose γ-radiation. We examined the cellular response in MRC-5 cells 0.5 h after exposure to 0.05 or 2 Gy. Using 1318 antibodies by antibody array, we observed ≥1.3-fold increases in a number of identified phosphoproteins in cells subjected to low-dose (0.05 Gy) and high-dose (2 Gy) radiation, suggesting that both radiation levels stimulate distinct signaling pathways. Low-dose radiation induced nucleic acid–binding transcription factor activity, developmental processes, and multicellular organismal processes. By contrast, high-dose radiation stimulated apoptotic processes, cell adhesion and regulation, and cellular organization and biogenesis. We found that phospho-BTK (Tyr550) and phospho-Gab2 (Tyr643) protein levels at 0.5 h after treatment were higher in cells subjected to low-dose radiation than in cells treated with high-dose radiation. We also determined that the phosphorylation of BTK and Gab2 in response to ionizing radiation was regulated in a dose-dependent manner in MRC-5 and NHDF cells. Our study provides new insights into the biological responses to low-dose γ-radiation and identifies potential candidate markers for monitoring exposure to low-dose ionizing radiation. PMID:28122968

A Cross-Species Study of PI3K Protein-Protein Interactions Reveals the Direct Interaction of P85 and SHP2

NASA Astrophysics Data System (ADS)

Breitkopf, Susanne B.; Yang, Xuemei; Begley, Michael J.; Kulkarni, Meghana; Chiu, Yu-Hsin; Turke, Alexa B.; Lauriol, Jessica; Yuan, Min; Qi, Jie; Engelman, Jeffrey A.; Hong, Pengyu; Kontaridis, Maria I.; Cantley, Lewis C.; Perrimon, Norbert; Asara, John M.

2016-02-01

Using a series of immunoprecipitation (IP) - tandem mass spectrometry (LC-MS/MS) experiments and reciprocal BLAST, we conducted a fly-human cross-species comparison of the phosphoinositide-3-kinase (PI3K) interactome in a drosophila S2R+ cell line and several NSCLC and human multiple myeloma cell lines to identify conserved interacting proteins to PI3K, a critical signaling regulator of the AKT pathway. Using H929 human cancer cells and drosophila S2R+ cells, our data revealed an unexpected direct binding of Corkscrew, the drosophila ortholog of the non-receptor protein tyrosine phosphatase type II (SHP2) to the Pi3k21B (p60) regulatory subunit of PI3K (p50/p85 human ortholog) but no association with Pi3k92e, the human ortholog of the p110 catalytic subunit. The p85-SHP2 association was validated in human cell lines, and formed a ternary regulatory complex with GRB2-associated-binding protein 2 (GAB2). Validation experiments with knockdown of GAB2 and Far-Western blots proved the direct interaction of SHP2 with p85, independent of adaptor proteins and transfected FLAG-p85 provided evidence that SHP2 binding on p85 occurred on the SH2 domains. A disruption of the SHP2-p85 complex took place after insulin/IGF1 stimulation or imatinib treatment, suggesting that the direct SHP2-p85 interaction was both independent of AKT activation and positively regulates the ERK signaling pathway.

Band-engineering of TiO2 as a wide-band gap semiconductor using organic chromophore dyes

NASA Astrophysics Data System (ADS)

Wahyuningsih, S.; Kartini, I.; Ramelan, A. H.; Saputri, L. N. M. Z.; Munawaroh, H.

2017-07-01

Bond-engineering as applied to semiconductor materials refers to the manipulation of the energy bands in order to control charge transfer processes in a device. When the device in question is a photoelectrochemical cell, the charges affected by drift become the focus of the study. The ideal band gap of semiconductors for enhancement of photocatalyst activity can be lowered to match with visible light absorption and the location of conduction Band (CB) should be raised to meet the reducing capacity. Otherwise, by the addition of the chromofor organic dyes, the wide-band gab can be influences by interacation resulting between TiO2 surface and the dyes. We have done the impruvisation wide-band gap of TiO2 by the addition of organic chromophore dye, and the addition of transition metal dopand. The TiO2 morphology influence the light absorption as well as the surface modification. The organic chromophore dye was syntesized by formation complexes compound of Co(PAR)(SiPA)(PAR)= 4-(2-piridylazoresorcinol), SiPA = Silyl propil amine). The result showed that the chromophore groups adsorbed onto TiO2 surface can increase the visible light absorption of wide-band gab semiconductor. Initial absorption of a chromophore will affect light penetration into the material surfaces. The use of photonic material as a solar cell shows this phenomenon clearly from the IPCE (incident photon to current conversion efficiency) measurement data. Organic chromophore dyes of Co(PAR)(SiPA) exhibited the long wavelength absorption character compared to the N719 dye (from Dyesol).

The reproductive cycle, condition index, and glycogen reserves of the cockles Cerastoderma glaucum from the Gulf of Gabès (Tunisia).

PubMed

Karray, Sahar; Smaoui-Damak, Wafa; Rebai, Tarek; Hamza-Chaffai, Amel

2015-11-01

The gametogenic cycle of the Cerastoderma glaucum was analyzed using both qualitative and semi-quantitative methods. The condition index and glycogen concentrations were determined in order to provide information on energy storage. The cockles were collected monthly from a Bayyadha site located 15 km south of Sfax City (Gulf of Gabès) between January 2007 and January 2008. From histological point of view, we applied two approaches: (i) the qualitative method describing the various stages of gamete development for males and females during a cycle of 13 months, and (ii) the semi-quantitative method concerning the estimation of different tissue surfaces. The results showed that there is evidence of three periods of reproduction in this population. A comparison between the surfaces occupied by the three organs showed that the foot and the gonad surfaces are higher than the surface of the adductor muscle. This could suggest that these two organs are more involved in the process of glycogen reserve storage. The results of the glycogen concentrations in the different tissues (gonad, adductor muscle, and "remainders") show that during the second and third periods of reproduction, glycogen was stored in the adductor muscle and in the remainder during sexual rest, and in the gonad during the gametogenesis phases in order to supply the reproductive effort. On the contrary, in the first period of reproduction, the low concentrations of glycogen recorded in the gonad coincided with its high degree of development. This fact could be related to environmental conditions (low temperature and food) recorded during this period.

SHP2 Is Required for BCR-ABL1-Induced Hematologic Neoplasia

PubMed Central

Gu, Shengqing; Sayad, Azin; Chan, Gordon; Yang, Wentian; Lu, Zhibin; Virtanen, Carl; Van Etten, Richard A.; Neel, Benjamin G.

2017-01-01

BCR-ABL1-targeting tyrosine kinase inhibitors (TKIs) have revolutionized treatment of Philadelphia chromosome-positive (Ph+) hematologic neoplasms. Nevertheless, acquired TKI resistance remains a major problem in chronic myeloid leukemia (CML), and TKIs are less effective against Ph+ B-cell acute lymphoblastic leukemia (B-ALL). GAB2, a scaffolding adaptor that binds and activates SHP2, is essential for leukemogenesis by BCR-ABL1, and a GAB2 mutant lacking SHP2 binding cannot mediate leukemogenesis. Using a genetic loss-of-function approach and bone marrow transplantation (BMT) models for CML and BCR-ABL1+ B-ALL, we show that SHP2 is required for BCR-ABL1-evoked myeloid and lymphoid neoplasia. Ptpn11 deletion impairs initiation and maintenance of CML-like myeloproliferative neoplasm, and compromises induction of BCR-ABL1+ B-ALL. SHP2, and specifically, its SH2 domains, PTP activity and C-terminal tyrosines, is essential for BCR-ABL1+, but not WT, pre-B cell proliferation. The MEK/ERK pathway is regulated by SHP2 in WT and BCR-ABL1+ pre-B cells, but is only required for the proliferation of BCR-ABL1+ cells. SHP2 is required for SRC family kinase (SFK) activation only in BCR-ABL1+ pre-B cells. RNAseq reveals distinct SHP2-dependent transcriptional programs in BCR-ABL1+ and WT pre-B cells. Our results suggest that SHP2, via SFKs and ERK, represses MXD3/4 to facilitate a MYC-dependent proliferation program in BCR-ABL1-transformed pre-B cells. PMID:28804122

Finite difference model for aquifer simulation in two dimensions with results of numerical experiments

USGS Publications Warehouse

Trescott, Peter C.; Pinder, George Francis; Larson, S.P.

1976-01-01

The model will simulate ground-water flow in an artesian aquifer, a water-table aquifer, or a combined artesian and water-table aquifer. The aquifer may be heterogeneous and anisotropic and have irregular boundaries. The source term in the flow equation may include well discharge, constant recharge, leakage from confining beds in which the effects of storage are considered, and evapotranspiration as a linear function of depth to water. The theoretical development includes presentation of the appropriate flow equations and derivation of the finite-difference approximations (written for a variable grid). The documentation emphasizes the numerical techniques that can be used for solving the simultaneous equations and describes the results of numerical experiments using these techniques. Of the three numerical techniques available in the model, the strongly implicit procedure, in general, requires less computer time and has fewer numerical difficulties than do the iterative alternating direction implicit procedure and line successive overrelaxation (which includes a two-dimensional correction procedure to accelerate convergence). The documentation includes a flow chart, program listing, an example simulation, and sections on designing an aquifer model and requirements for data input. It illustrates how model results can be presented on the line printer and pen plotters with a program that utilizes the graphical display software available from the Geological Survey Computer Center Division. In addition the model includes options for reading input data from a disk and writing intermediate results on a disk.

Hydrogeology and structure of the Bluewater Springs area south central Montana

DOE Office of Scientific and Technical Information (OSTI.GOV)

Padilla, C.E.; Osborne, T.J.

1996-06-01

The Bluewater springs area in south central Montana was the site of oil and gas exploration in the first half of this century. Though no significant oil was found, artesian water wells produced over 3,000 gallons per minute. Artesian springs in the area produce tufa deposits over faulted, northwest dipping Mesozoic and upper Paleozoic sediments. Two new faults were mapped in the vicinity, one of these a high angle vertical fault dissects an anticline. The Tensleep and Madison aquifers (700-1,000 feet deep) leak water to the surface through faults and fractures, producing variable water quality depending on the minerals dissolvedmore » from overlying rock formations. Evaluation of limited aquifer data reveals the following: (1) hydraulic conductivity of 40,000 to 300,000 gpd/ft, (2) hydrostatic head greater than 400 feet above land surface. (3) Total dissolved solids concentrations were 2,370 ppm in Big Bluewater Springs, but only 1,200 ppm in a Tensleep well in the vicinity. Flowing wells 45 to 70 years old have failed leading to major yield reductions, and cessation of flow. Potentially corrosive groundwater coupled with excessive flow velocities and inadequate well construction has likely led to well failures. In response, major uncontrolled alterations of groundwater flow systems have occurred with outbreaks of new springs and sinkholes near failed wells. New wells must be carefully planned, constructed and tested to avoid excessive interference, depressurization and failure.« less

Distribution and origin of salinity in the surficial and intermediate aquifer systems, southwestern Florida

USGS Publications Warehouse

Schmerge, David L.

2001-01-01

Chloride concentrations in the surficial and intermediate aquifer systems in southwestern Florida indicate a general trend of increasing salinity coastward and with depth. There are some notable exceptions to this trend. Brackish water is present in the sandstone and mid-Hawthorn aquifers in several inland areas in Lee County. In an area near the coast in Collier County, the lower Tamiami aquifer contains freshwater, with brackish water present farther inland. Saline water is present in the lower Tamiami aquifer along the coast in Collier County, but water is brackish in the underlying mid-Hawthorn and Upper Floridan aquifers. The analyses of major ions, hydrogen and oxygen isotopes, and strontium isotopes indicate the primary sources of salinity are underlying aquifers and the Gulf of Mexico. Based on these data, much of the salinity is from upward leakage of brackish water from underlying aquifers. Discharge as diffuse upward leakage and artesian wells are two possible pathways of saltwater intrusion from underlying aquifers. Artesian wells open to multiple aquifers have been pathways of saltwater intrusion in the sandstone and mid-Hawthorn aquifers in much of Lee County. The source of brackish water in the lower Tamiami and mid-Hawthorn aquifers in Collier County may be natural diffuse leakage from underlying aquifers. The source of the saline water in the lower Tamiami aquifer in Collier County is apparently the Gulf of Mexico; it is unclear however, whether this saline water is residual water from former Pleistocene sea invasions or recent saltwater intrusion.

Artesian water in the Malabar coastal plain of southern Kerala, India

USGS Publications Warehouse

Taylor, George C.; Ghosh, P.K.

1964-01-01

The present report is based on a geological and hydrological reconnaissance during 1954 of the Malabar Coastal Plain and adjacent island area of southern Kerala to evaluate the availability of ground water for coastal villages and municipalities and associated industries and the potentialities for future development. The work was done in cooperation with the Geological Survey of India and under the auspices of the U.S. Technical Cooperation Mission to India. The State of Kerala, which lies near the southern tip of India and along the eastern shore of the Caspian Sea, contains a total area of 14,937 square miles. The eastern part of the state is s rugged mountainous highland which attains altitudes of more than 6,000 feet. This highland descends westward through piedmont upland to s narrow coastal plain, which reaches a maximum width of about 16 miles in the latitude of Shertalli. A tropical monsoon rain-forest climate prevails in most of Kerala, and annual rainfall ranges from 65 to 130 inches in the southern part of the coastal plain to as much a 200 inches in the highland. The highland and piedmont upland tracts of Kerala are underlain by Precambrian meamorphic and igneous rocks belonging in large parabola-the so-called Charnockite Series. Beneath ahe coastal plain are semiconsolidated asunconsolidated sedimentary deposits whose age ranges from Miocene to Recent. These deposits include sofa sandstone and clay shale containing some marl or limestone and sand, and clay and pea containing some gravel. The sofa sandstone, sand, and gravel beds constitute important aquifers a depths ranging from a few tens of feet to 400 feet or more below the land surface. The shallow ground war is under water-able or unconfined conditions, but the deeper aquifers contain water under artesian pressure. Near the coast, drilled wells tapping the deeper aquifers commonly flow with artesian heads as much as 10 to 12 feet above the land surface. The draft from existing wells in the coastal belt between Quilon and Alleppy was estimated at 1 to 1 1/2 million imperial gallons a day. However, favorable conations exist for considerable further ground-water development in the coastal plain provided that sufficient attention is given to the potential hazards of saltwater encroachment and local overdevelopment. It is estimated that the overall potential for development of water from wells is probably at least several tens of millions of gallons a day, and perhaps more, in the Malabar Coastal Plain of southern Kera. Such a draft would have to be well dispersed to avoid overdevelopment and salt-war encroachment.

Geology and hydrology of the Fort Belknap Indian Reservation, Montana

USGS Publications Warehouse

Alverson, Douglas C.

1965-01-01

The Fort Belknap Indian Reservation includes an area of 970 square miles in north-central Montana. At its north edge is the Milk River valley, which is underlain by Recent alluvium of the Milk River, glacial deposits, and alluvial deposits of the preglacial Missouri River, which carved and occupied this valley before the Pleistocene Epoch. Rising gently to the south is an undulating glaciated plain broken only by three small syenite porphyry intrusions. Underlying the glacial till of the plain are Upper Cretaceous shale and sandstone of the Bearpaw and Judith River Formations. At the south end of the reservation, 40 miles from the Milk River, an intrusion of syenite porphyry in Tertiary time uplifted, tilted, and exposed the succession of sedimentary rocks overlying the Precambrian metamorphic basement. The sedimentary rocks include 1,000 feet of sandstone and shale of Cambrian age; 2,000 feet of limestone and dolomite of Ordovician, Devonian, and Mississippian age; 400 feet of shale and limestone of Jurassic age; and 3,500 feet of sandstone, siltstone, and shale of Cretaceous age. Extensive gravel terraces of Tertiary and Quaternary age bevel the upturned bedrock formations exposed around the Little Rocky Mountains. Ground water under water-table conditions is obtained at present from alluvium, glaciofluvial deposits, and the Judith River Formation. The water table ranges in depth from a few feet beneath the surface in the Milk River valley alluvium to more than 100 feet deep in the Judith River Formation. Yields to wells are generally low but adequate for domestic and stock-watering use. Quality of the water ranges from highly mineralized and unusable to excellent; many wells in the Milk River valley have been abandoned because of the alkalinity of their water. Potential sources of additional ground-water supplies are the alluvial gravel of creeks issuing from the Little Rocky Mountains and some extensive areas of terrace gravel. The uplift and tilting of the sedimentary sequence around the Little Rocky Mountains and the minor intrusions in the central plain have created artesian conditions within aquifers. Wells obtain artesian water from sandstone aquifers in the Judith River, Eagle, and Kootenai Formations. Other potential aquifers, near their outcrop areas, are the Ellis Group and the Mission Canyon Limestone. Most wells that flow at the surface have small yields, but discharges of as much as 150 gallons per minute have been noted. Quality of artesian water ranges from poor to good. Well depths range from less than 50 to more than 300 feet.

Development of water facilities in the Santa Ana River Basin, California, 1810-1968: a compilation of historical notes derived from many sources describing ditch and canal companies, diversions, and water rights

USGS Publications Warehouse

Scott, M.B.

1977-01-01

This report traces by text, maps, and photographs, the development of the water supply in the Santa Ana River basin from its beginning in 1810 or 1811 to 1968. The value of the report lies in the fact that interpretation of the hydrologic systems in the basin requires knowledge of the concurrent state of development of the water supply, because that development has progressively altered the local regimen of both surface water and ground water. Most of the information for the earlier years was extracted and condensed from an investigation made by W. H. Hall, California State Engineer during the years 1878-87. Hall's study described irrigation development in southern California from its beginning through 1888. Information for the years following 1888 was obtained from the archives of the numerous water companies and water agencies in the Santa Ana River basin and from the various depositories of courthouse, county, and municipal records. The history of water-resources development in the Santa Ana River basin begins with the introduction of irrigation in the area by the Spanish, who settled in southern California in the latter part, of the 18th century. The first irrigation diversion from the Santa Ana River was made in 1810 or 1811 by Jose Antonio Yorba and Juan Pablo Peralta. Irrigation remained a localized practice during the Mexican-Californian, or rancho, period following the separation of Mexico from Spain in 1821. Rancho grantees principally raised cattle, horses, and sheep and irrigated only small· plots of feed grain for their livestock and fruit crops for household use. The breakup of the ranchos through sales to Americans, who were migrating to California in ever-increasing numbers following the acquisition of California by the United States in 1848, marked the beginning of a rapid increase in water use and the beginning of widespread irrigation. Many water companies and water agencies were organized to divert the surface flow of the Santa Ana River and its tributaries for irrigation. The Santa Ana River had been a perennial stream, except in years of extreme drought, from its source in the mountains nearly to the Pacific Ocean. With the great increase in population and the accompanying use of water for irrigation, the river was no longer a perennial stream, and it was necessary to supplement the surface-water supply with ground water. Many wells were dug or drilled in the artesian areas of the upper basin; of those wells many originally flowed, but as ground-water pressures and levels declined, an increasing amount of pumping was required. Conservation measures were taken to store some of the surplus winter runoff for use during low runoff years and during summer periods of heavy demand. Conservation facilities included surface-storage reservoirs and water-spreading grounds or percolation basins for utilization of underground storage. The competition for water in the Santa Ana River basin has been accompanied by frequent litigation over water tights, and over the years these water rights have generally been established by court decree. Although the demand for water still increases, the water demand for agricultural use has declined since the mid-1940's in response to the rapid urbanization of agricultural areas. Since that date the continued expansion of communities has encroached significantly into the agricultural areas causing a decrease in water use for agriculture, a more than compensating increase in water use for municipal purposes, and a rapid change in the ownership of water rights. The urbanization of flood plains made floods potentially more damaging than they previously had been when the flood plains were used for agriculture. In recognition of this increased hazard, flood-control facilities such as reservoirs, debris basins, flood-conveyance channels, and levees have been constructed to reduce potential damage. Most of the construction has occurred since the devastating flood of March 1938. By the mid-1940's it was apparent that the local water supply--both surface and ground water--would be insufficient to meet the increasing demand in the basin. To augment the local supply, Colorado River water was purchased from the Metropolitan Water District of Southern California and released to the Santa Ana River beginning in August 1949. Additional supplemental water became available in the early 1970's from northern California through the conveyance facilities of the California Water Project.

Technologies for the exploration of highly mineralized geothermal resources

NASA Astrophysics Data System (ADS)

Alkhasov, A. B.; Alkhasova, D. A.; Ramazanov, A. Sh.; Kasparova, M. A.

2017-09-01

The prospects of the integrated processing of the high-parameter geothermal resources of the East Ciscaucasia of artesian basin (ECAB) with the conversion of their heat energy into electric energy at a binary geoPP and the subsequent extraction of solved chemical compounds from thermal waters are evaluated. The most promising areas for the exploration such resources are overviewed. The integrated exploration of hightemperature hydrogeothermal brines is a new trend in geothermal power engineering, which can make it possible to significantly increase the production volume of hydrogeothermal resources and develop the geothermal field at a higher level with the realization of the energy-efficient advanced technologies. The large-scale exploration of brines can solve the regional problems of energy supply and import substitution and fulfill the need of Russia in food and technical salt and rare elements. The necessity of the primary integrated exploration of the oil-field highly mineralized brines of the South Sukhokumskii group of gas-oil wells of Northern Dagestan was shown in view of the exacerbated environmental problems. Currently, the oil-field brines with the radioactive background exceeding the allowable levels are discharged at disposal fields. The technological solutions for their deactivation and integrated exploration are proposed. The realization of the proposed technological solutions provides 300 t of lithium carbonate, 1650 t of caustic magnesite powder, 27300 t of chemically precipitated chalk, 116100 t of food salt, and up to 1.4 mln m3 of desalinated water from oil-field brines yearly. Desalinated water at the output of a geotechnological complex can be used for different economic needs, which is important for the arid North Caucasus region, where the fresh water deficiency is acute, especially in its plain part within the ECAB.

Multifluid geo-energy systems: Using geologic CO 2 storage for geothermal energy production and grid-scale energy storage in sedimentary basins

DOE PAGES

Buscheck, Thomas A.; Bielicki, Jeffrey M.; Edmunds, Thomas A.; ...

2016-05-05

We present an approach that uses the huge fluid and thermal storage capacity of the subsurface, together with geologic carbon dioxide (CO 2) storage, to harvest, store, and dispatch energy from subsurface (geothermal) and surface (solar, nuclear, fossil) thermal resources, as well as excess energy on electric grids. Captured CO 2 is injected into saline aquifers to store pressure, generate artesian flow of brine, and provide a supplemental working fluid for efficient heat extraction and power conversion. Concentric rings of injection and production wells create a hydraulic mound to store pressure, CO 2, and thermal energy. This energy storage canmore » take excess power from the grid and excess/waste thermal energy, and dispatch that energy when it is demanded and thus enable higher penetration of variable renewable energy technologies (e.g., wind, solar). CO 2 stored in the subsurface functions as a cushion gas to provide enormous pressure-storage capacity and displace large quantities of brine, some of which can be treated for a variety of beneficial uses. Geothermal power and energy-storage applications may generate enough revenues to compensate for CO 2 capture costs. While our approach can use nitrogen (N 2), in addition to CO 2, as a supplemental fluid, and store thermal energy, this study focuses using CO 2 for geothermal energy production and grid-scale energy storage. We conduct a techno-economic assessment to determine the levelized cost of electricity of using this approach to generate geothermal power. We present a reservoir pressure-management strategy that diverts a small portion of the produced brine for beneficial consumptive use to reduce the pumping cost of fluid recirculation, while reducing the risk of seismicity, caprock fracture, and CO 2 leakage.« less

Evaluation of water resources in part of central Texas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baker, B.; Duffin, G.; Flores, R.

1990-01-01

Water resources in the Brazos, Red, Colorado, and Trinity River basins, in central Texas, were evaluated. In 1985 there was a little less than 81,000 acre-ft of groundwater pumped from all aquifers in the study area, with a little less than 77,000 acre-ft of groundwater pumped from the Trinity Group aquifer. Irrigation accounted for about 56% of all groundwater pumped. A serious problem associated with the development of groundwater from the Trinity Group aquifer is the decline of artesian pressure in areas of large groundwater withdrawals. Degradation of groundwater within the Antlers and Travis Peak Formations from oil-field brines andmore » organic material are problems in several counties. The deterioration of water qualify for the City of Blum has occurred over a 26-year period and is associated with water level declines in the Hensell Member of the Travis Peak Formation. The Woodbine Group yields good quality water at or near the outcrop; however, the residual sodium carbonate and percent sodium limits its use for irrigation, while high iron and fluoride content restricts its use for public supply. Existing surface reservoirs in the study area alone can supply 296,400 acre-ft of water under 2010 conditions. Nearly all of this water is either currently owned or under contract to supply current and future needs. An additional 176,000 acre-ft of surface water could become available with the development of the proposed Lake Bosque and Paluxy Reservoir projects and with reallocation of storage in existing Lakes Waco and Whitney. The amount of groundwater currently pumped exceeds the estimated annual effective recharge to the Trinity Group aquifer; the groundwater supply for the area will continue to be drawn from storage within the aquifer. 84 refs., 21 figs., 3 tabs.« less

Chemistry of a low temperature geothermal reservoir: The Triassic sandstone aquifer at Melleray, FR

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vuataz, Francois-David; Fouillac, Christian; Detoc, Aylvie

1988-01-01

The Triassic sandstone aquifer offers on a regional scale, a large potential for low-temperature geothermal exploitation in the Paris Basin. The Na-Cl water n the aquifer has highly variable mineralization (TDS = 4 to 110 g/l) and a wide range of temperature (50º to >100ºC). Chemical studies have been carried out on the Melleray site near Orléans, where a single wel was producing a Na-Cl geothermal water (TDS = 35 g/l) at a wellhead temperature of 72ºC to provide heat for greenhouses. The purpose of these studies is to understand the chemical phenomena occurring in the geothermal loop and tomore » determine the treatment of the fluid and the exploitation procedures necessary for proper reinjection conditions to be achieved. During the tests performed after the drilling operations, chemical variations in the fluid were noticed between several producing zones in the aquifer. Daily geochemical monitoring of the fluid was carried out during two periods of differing exploitation conditions, respectively pumping at 148 m{sup 3}/h and artesian flow at 36 m{sup 3}/h. Vertical heterogeneities of the aquifer can explain the variations observed for the high flowrate. Filtration experiments revealed that the particle load varies with the discharge rate and that over 95 weight % of the particles are smaller than 1 micrometer. The chemistry of the particles varies greatly, according to their origin as corrosion products from the well casing, particles drawn out of the rock or minerals newly formed through water-rock reactions. Finally, small-scale oxidation experiments were carried out on the geothermal fluid to observe the behavior of Fe and SiO{sub 2} and to favour particle aggregates for easier filtration or decantation processes.« less

Hotspot: the Snake River Geothermal Drilling Project--initial report

USGS Publications Warehouse

Shervais, J.W.; Nielson, D.; Lachmar, T.; Christiansen, E.H.; Morgan, L.; Shanks, Wayne C.; Delahunty, C.; Schmitt, D.R.; Liberty, L.M.; Blackwell, D.D.; Glen, J.M.; Kessler, J.A.; Potter, K.E.; Jean, M.M.; Sant, C.J.; Freeman, T.

2012-01-01

The Snake River volcanic province (SRP) overlies a thermal anomaly that extends deep into the mantle; it represents one of the highest heat flow provinces in North America. The primary goal of this project is to evaluate geothermal potential in three distinct settings: (1) Kimama site: inferred high sub-aquifer geothermal gradient associated with the intrusion of mafic magmas, (2) Kimberly site: a valley-margin setting where surface heat flow may be driven by the up-flow of hot fluids along buried caldera ringfault complexes, and (3) Mountain Home site: a more traditional fault-bounded basin with thick sedimentary cover. The Kimama hole, on the axial volcanic zone, penetrated 1912 m of basalt with minor intercalated sediment; no rhyolite basement was encountered. Temperatures are isothermal through the aquifer (to 960 m), then rise steeply on a super-conductive gradient to an estimated bottom hole temperature of ~98°C. The Kimberly hole is on the inferred margin of a buried rhyolite eruptive center, penetrated rhyolite with intercalated basalt and sediment to a TD of 1958 m. Temperatures are isothermal at 55-60°C below 400 m, suggesting an immense passive geothermal resource. The Mountain Home hole is located above the margin of a buried gravity high in the western SRP. It penetrates a thick section of basalt and lacustrine sediment overlying altered basalt flows, hyaloclastites, and volcanic sediments, with a TD of 1821 m. Artesian flow of geothermal water from 1745 m depth documents a power-grade resource that is now being explored in more detail. In-depth studies continue at all three sites, complemented by high-resolution gravity, magnetic, and seismic surveys, and by downhole geophysical logging.

A spatial epidemiological analysis of nontuberculous mycobacterial infections in Queensland, Australia.

PubMed

Chou, Michael P; Clements, Archie C A; Thomson, Rachel M

2014-05-21

The epidemiology of infections with nontuberculous mycobacteria (NTM) has been changing and the incidence has been increasing in some settings. The main route of transmission to humans is considered to be from the environment. We aimed to describe spatial clusters of cases of NTM infections and to identify associated climatic, environmental and socio-economic variables. NTM data were obtained from the Queensland Mycobacterial Reference Laboratory for the period 2001-2011. A Bayesian spatial conditional autoregressive model was constructed at the postcode level, with covariates including soil variables, maximum, mean and minimum rainfall and temperature, income (proportion of population earning < $32,000 and < $52,000) and land use category. Significant clusters of NTM infection were identified in the central Queensland region overlying the Surat sub-division of the Great Artesian Basin, as well as in the lower North Queensland Local Government Area known as the Whitsunday region. Our models estimated an expected increase of 21% per percentage increase of population earning < $52,000 (95% CI 9-34%) and an expected decrease of 13% for every metre increase of average topsoil depth for risk of Mycobacterium intracellulare infection (95% CI -3 - -22%). There was an estimated increase of 79% per mg/m3 increase of soil bulk density (95% CI 26-156%) and 19% decrease for every percentage increase in population earning < $32,000 for risk of M. kansasii infection (95% CI -3 - -49%). There were distinct spatial clusters of M. kansasii, M. intracellulare and M. abscessus infections in Queensland, and a number of socio-ecological, economic and environmental factors were found to be associated with NTM infection risk.

Water resources of Carbon County, Wyoming

USGS Publications Warehouse

Bartos, Timothy T.; Hallberg, Laura L.; Mason, Jon P.; Norris, Jodi R.; Miller, Kirk A.

2006-01-01

Carbon County is located in the south-central part of Wyoming and is the third largest county in the State. A study to describe the physical and chemical characteristics of surface-water and ground-water resources in Carbon County was conducted by the U.S. Geological Survey in cooperation with the Wyoming State Engineer's Office. Evaluations of streamflow and stream-water quality were limited to analyses of historical data and descriptions of previous investigations. Surface-water data were not collected as part of the study. Forty-five ground-water-quality samples were collected as part of the study and the results from an additional 618 historical ground-water-quality samples were reviewed. Available hydrogeologic characteristics for various aquifers in hydrogeologic units throughout the county also are described. Flow characteristics of streams in Carbon County vary substantially depending on regional and local basin char-acteristics and anthropogenic factors. Precipitation in the county is variable with high mountainous areas receiving several times the annual precipitation of basin lowland areas. For this reason, streams with headwaters in mountainous areas generally are perennial, whereas most streams in the county with headwaters in basin lowland areas are ephemeral, flowing only as a result of regional or local rainfall or snowmelt runoff. Flow characteristics of most perennial streams are altered substantially by diversions and regulation. Water-quality characteristics of selected streams in and near Carbon County during water years 1966 through 1986 varied. Concentrations of dissolved constituents and suspended sediment were smallest at sites on streams with headwaters in mountainous areas because of resistant geologic units, large diluting streamflows, and increased vegetative cover compared to sites on streams with headwaters in basin lowlands. Both water-table and artesian conditions occur in aquifers within the county. Shallow ground water is available throughout the county, although much of it is only marginally suitable or is unsuitable for domestic and irrigation uses mainly because of high total dissolved solids (TDS) concentrations. Suitable ground water for livestock use is available in most areas of the county. Ground-water quality tends to deteriorate with increasing distance from recharge areas and with increasing depth below land surface. Ground water from depths greater than a few thousand feet tends to have TDS concentrations that make it moderately saline to briny. In some areas, even shallow ground water is moderately saline. Specific constituents in parts of some aquifers in the county occur in relatively high concentrations when compared to U.S. Environmental Protection Agency drinking-water standards; for example, relatively high concentrations of sulfate, chloride, fluoride, boron, iron, manganese, and radon were found in several aquifers. The estimated mean daily water use in Carbon County in 2000 was about 320 million gallons per day. Water used for irrigation accounted for about 98 percent of this total. About 98 percent of the total water used was supplied by surface water and about 2 percent by ground water. Excluding irrigation, ground water comprised about 78 percent of total water use in Carbon County. Although ground water is used to a much lesser extent than surface water, in many areas of the county it is the only available water source.

Hydraulics of wells

USGS Publications Warehouse

McLaughlin, Thad G.

1955-01-01

Although the subject of this lecture is supposed to be concerned primarily with the hydraulics of wells, Professor Weers has asked that I also discuss the effects tat geological formations have on the quantity and quality of water available to wells. I will discuss the geology of Colorado in relation to the availability and quality of water with particular reference to the most productive aquifers or water-bearing formations in the State. I will then discuss the hydraulics of wells with the aim of emphasizing the differences between water-table and artesian conditions.

Diagenesis of Upper Carboniferous rocks in the Ouachita foreland shelf in mid-continent USA: an overview of widespread effects of a Variscan-equivalent orogeny

USGS Publications Warehouse

Walton, A.W.; Wojcik, K.M.; Goldstein, R.H.; Barker, C.E.

1995-01-01

Diagenesis of Upper Carboniferous foreland shelf rocks in southeastern Kansas took place at temperatures as high as 100-150?? C at a depth of less than 2 km. High temperatures are the result of the long distance (hundreds of kilometers) advection of groundwater related to collisional orogeny in the Ouachita tectonic belt to the south. Orogenic activity in the Ouachita area was broadly Late Carboniferous, equivalent to the Variscan activity of Europe. Mississippi Valley-type Pb-Zn deposits and oil and gas fields in the US midcontinent and elsewhere are commonly attributed to regional groundwater flow resulting from such collisional events. This paper describes the diagenesis and thermal effects in sandstone and limestone of Upper Carboniferous siliciclastic and limestone-shale cyclothems, the purported confining layer of a supposed regional aquifer. Diagenesis took place in early, intermediate, and late stages. Many intermediate and late stage events in the sandstones have equivalents in the limestones, suggesting that the causes were regional. The sandstone paragenesis includes siderite cement (early stage), quartz overgrowths (intermediate stage), dissolution of feldspar and carbonates, followed by minor Fe calcite, pore-filling kaolinite and sub-poikilotopic Ca ankerite (late stage). The limestone paragenesis includes calcite cement (early stage); megaquartz, chalcedony, and Fe calcite spar (intermediate stage); and dissolution, Ca-Fe dolomite and kaolinite (late stage). The Rm value of vitrinite shows a regional average of 0.6-0.7%; Rock-Eval TmaX suggests a comparable degree of organic maturity. The Th of aqueous fluid inclusions in late stage Ca-Fe-Mg carbonates ranges from 90 to 160?? and Tmice indicates very saline water (>200000 ppm NaCl equivalent); ??18O suggests that the water is of basinal origin. Local warm spots have higher Rm, Tmax, and Th. The results constrain numerical models of regional fluid migration, which is widely viewed as an artesian flow from recharge areas in the Ouachita belt across the foreland basin onto the foreland shelf area. Such models must account for heating effects that extend at least 500 km from the orogenic front and affect both supposed aquifer beds and the overlying supposed confining layer. Warm spots indicate either more rapid or more prolonged flow locally. Th and Tmice data show the highest temperatures coincided with high salinity fluids. ?? 1995 Springer-Verlag.

Implementation of a Serial Replica Exchange Method in a Physics-Based United-Residue (UNRES) Force Field

PubMed Central

Shen, Hujun; Czaplewski, Cezary; Liwo, Adam; Scheraga, Harold A.

2009-01-01

The kinetic-trapping problem in simulating protein folding can be overcome by using a Replica Exchange Method (REM). However, in implementing REM in molecular dynamics simulations, synchronization between processors on parallel computers is required, and communication between processors limits its ability to sample conformational space in a complex system efficiently. To minimize communication between processors during the simulation, a Serial Replica Exchange Method (SREM) has been proposed recently by Hagan et al. (J. Phys. Chem. B 2007, 111, 1416–1423). Here, we report the implementation of this new SREM algorithm with our physics-based united-residue (UNRES) force field. The method has been tested on the protein 1E0L with a temperature-independent UNRES force field and on terminally blocked deca-alanine (Ala10) and 1GAB with the recently introduced temperature-dependent UNRES force field. With the temperature-independent force field, SREM reproduces the results of REM but is more efficient in terms of wall-clock time and scales better on distributed-memory machines. However, exact application of SREM to the temperature-dependent UNRES algorithm requires the determination of a four-dimensional distribution of UNRES energy components instead of a one-dimensional energy distribution for each temperature, which is prohibitively expensive. Hence, we assumed that the temperature dependence of the force field can be ignored for neighboring temperatures. This version of SREM worked for Ala10 which is a simple system but failed to reproduce the thermodynamic results as well as regular REM on the more complex 1GAB protein. Hence, SREM can be applied to the temperature-independent but not to the temperature-dependent UNRES force field. PMID:20011673

Noonan syndrome-associated SHP2/PTPN11 mutants cause EGF-dependent prolonged GAB1 binding and sustained ERK2/MAPK1 activation.

PubMed

Fragale, Alessandra; Tartaglia, Marco; Wu, Jie; Gelb, Bruce D

2004-03-01

Noonan syndrome is a developmental disorder with dysmorphic facies, short stature, cardiac defects, and skeletal anomalies, which can be caused by missense PTPN11 mutations. PTPN11 encodes Src homology 2 domain-containing tyrosine phosphatase 2 (SHP2 or SHP-2), a protein tyrosine phosphatase that acts in signal transduction downstream to growth factor, hormone, and cytokine receptors. We compared the functional effects of three Noonan syndrome-causative PTPN11 mutations on SHP2's phosphatase activity, interaction with a binding partner, and signal transduction. All SHP2 mutants had significantly increased basal phosphatase activity compared to wild type, but that activity varied significantly between mutants and was further increased after epidermal growth factor stimulation. Cells expressing SHP2 mutants had prolonged extracellular signal-regulated kinase 2 activation, which was ligand-dependent. Binding of SHP2 mutants to Grb2-associated binder-1 was increased and sustained, and tyrosine phosphorylation of both proteins was prolonged. Coexpression of Grb2-associated binder-1-FF, which lacks SHP2 binding motifs, blocked the epidermal growth factor-mediated increase in SHP2's phosphatase activity and resulted in a dramatic reduction of extracellular signal-regulated kinase 2 activation. Taken together, these results document that Noonan syndrome-associated PTPN11 mutations increase SHP2's basal phosphatase activity, with greater activation when residues directly involved in binding at the interface between the N-terminal Src homology 2 and protein tyrosine phosphatase domains are altered. The SHP2 mutants prolonged signal flux through the RAS/mitogen-activated protein kinase (ERK2/MAPK1) pathway in a ligand-dependent manner that required docking through Grb2-associated binder-1 (GAB1), leading to increased cell proliferation. Copyright 2004 Wiley-Liss, Inc.

Soft tissue angiofibroma: Clinicopathologic, immunohistochemical and molecular analysis of 14 cases.

PubMed

Bekers, Elise M; Groenen, Patricia J T A; Verdijk, Marian A J; Raaijmakers-van Geloof, Winny L; Roepman, Paul; Vink, Robert; Gilhuijs, Nathalie D B; van Gorp, Joost M; Bovée, Judith V M G; Creytens, David H; Flanagan, Adrienne M; Suurmeijer, Albert J H; Mentzel, Thomas; Arbajian, Elsa; Flucke, Uta

2017-10-01

Soft tissue angiofibroma is rare and has characteristic histomorphological and genetic features. For diagnostic purposes, there are no specific antibodies available. Fourteen lesions (6 females, 8 males; age range 7-67 years) of the lower extremities (12) and trunk (2) were investigated by immunohistochemistry, including for the first time NCOA2. NCOA2 was also tested in a control group of other spindle cell lesions. The known fusion-genes (AHRR-NCOA2 and GTF2I-NCOA2) were examined using RT-PCR in order to evaluate their diagnostic value. Cases in which no fusion gene was detected were additionally analysed by RNA sequencing. All cases tested showed nuclear expression of NCOA2. However, this was not specific since other spindle cell neoplasms also expressed this marker in a high percentage of cases. Other variably positive markers were EMA, SMA, desmin and CD34. STAT6 was negative in the cases tested. By RT-PCR for the most frequently observed fusions, an AHRR-NCOA2 fusion transcript was found in 9/14 cases. GTF2I-NCOA2 was not detected in the remaining cases (n = 3). RNA sequencing revealed three additional positive cases; two harbored a AHRR-NCOA2 fusion and one case a novel GAB1-ABL1 fusion. Two cases failed molecular analysis due to poor RNA quality. In conclusion, the AHRR-NCOA2 fusion is a frequent finding in soft tissue angiofibroma, while GTF2I-NCOA2 seems to be a rare genetic event. For the first time, we report a GAB1-ABL1 fusion in a soft tissue angiofibroma of a child. Nuclear expression of NCOA2 is not discriminating when compared with other spindle cell neoplasms. © 2017 Wiley Periodicals, Inc.

Immunomodulation of human B cells following treatment with intravenous immunoglobulins involves increased phosphorylation of extracellular signal-regulated kinases 1 and 2.

PubMed

Dussault, Nathalie; Ducas, Eric; Racine, Claudia; Jacques, Annie; Paré, Isabelle; Côté, Serge; Néron, Sonia

2008-11-01

In the treatment of autoimmune diseases, intravenous Igs (IVIg) are assumed to modulate immune cells through the binding of surface receptors. IVIg act upon definite human B cell populations to modulate Ig repertoire, and such modulation might proceed through intracellular signaling. However, the heterogeneity of human B cell populations complicates investigations of the intracellular pathways involved in IVIg-induced B cell modulation. The aim of this study was to establish a model allowing the screening of IVIg signal transduction in human B cell lines and to attempt transposing observations made in cell lines to normal human B lymphocytes. Nine human B cell lines were treated with IVIg with the goal of selecting the most suitable model for human B lymphocytes. The IgG(+) DB cell line, whose response was similar to that of human B lymphocytes, showed reduced IVIg modulation following addition of PD98059, an inhibitor of extracellular signal-regulated protein kinase 1/2 (ERK1/2). The IVIg-induced ERK1/2 phosphorylation was indeed proportional to the dosage of monomeric IVIg used when tested on DB cells as well as Pfeiffer cells, another IgG(+) cell line. In addition, two other intermediates, Grb2-associated binder 1 (Gab1) and Akt, showed increased phosphorylation in IVIg-treated DB cells. IVIg induction of ERK1/2 phosphorylation was finally observed in peripheral human B lymphocytes, specifically within the IgG(+) B cell population. In conclusion, IVIg immunomodulation of human B cells can thus be linked to intracellular transduction pathways involving the phosphorylation of ERK1/2, which in combination with Gab1 and Akt, may be related to B cell antigen receptor signaling.

Dual inhibition of Met kinase and angiogenesis to overcome HGF-induced EGFR-TKI resistance in EGFR mutant lung cancer.

PubMed

Takeuchi, Shinji; Wang, Wei; Li, Qi; Yamada, Tadaaki; Kita, Kenji; Donev, Ivan S; Nakamura, Takahiro; Matsumoto, Kunio; Shimizu, Eiji; Nishioka, Yasuhiko; Sone, Saburo; Nakagawa, Takayuki; Uenaka, Toshimitsu; Yano, Seiji

2012-09-01

Acquired resistance to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) is a serious problem in the management of EGFR mutant lung cancer. We recently reported that hepatocyte growth factor (HGF) induces resistance to EGFR-TKIs by activating the Met/PI3K pathway. HGF is also known to induce angiogenesis in cooperation with vascular endothelial growth factor (VEGF), which is an important therapeutic target in lung cancer. Therefore, we hypothesized that dual inhibition of HGF and VEGF may be therapeutically useful for controlling HGF-induced EGFR-TKI-resistant lung cancer. We found that a dual Met/VEGF receptor 2 kinase inhibitor, E7050, circumvented HGF-induced EGFR-TKI resistance in EGFR mutant lung cancer cell lines by inhibiting the Met/Gab1/PI3K/Akt pathway in vitro. HGF stimulated VEGF production by activation of the Met/Gab1 signaling pathway in EGFR mutant lung cancer cell lines, and E7050 showed an inhibitory effect. In a xenograft model, tumors produced by HGF-transfected Ma-1 (Ma-1/HGF) cells were more angiogenic than vector control tumors and showed resistance to gefitinib. E7050 alone inhibited angiogenesis and retarded growth of Ma-1/HGF tumors. E7050 combined with gefitinib induced marked regression of tumor growth. Moreover, dual inhibition of HGF and VEGF by neutralizing antibodies combined with gefitinib also markedly regressed tumor growth. These results indicate the therapeutic rationale of dual targeting of HGF-Met and VEGF-VEGF receptor 2 for overcoming HGF-induced EGFR-TKI resistance in EGFR mutant lung cancer. Copyright © 2012 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.

Genomics-assisted breeding in four major pulse crops of developing countries: present status and prospects.

PubMed

Bohra, Abhishek; Pandey, Manish K; Jha, Uday C; Singh, Balwant; Singh, Indra P; Datta, Dibendu; Chaturvedi, Sushil K; Nadarajan, N; Varshney, Rajeev K

2014-06-01

Given recent advances in pulse molecular biology, genomics-driven breeding has emerged as a promising approach to address the issues of limited genetic gain and low productivity in various pulse crops. The global population is continuously increasing and is expected to reach nine billion by 2050. This huge population pressure will lead to severe shortage of food, natural resources and arable land. Such an alarming situation is most likely to arise in developing countries due to increase in the proportion of people suffering from protein and micronutrient malnutrition. Pulses being a primary and affordable source of proteins and minerals play a key role in alleviating the protein calorie malnutrition, micronutrient deficiencies and other undernourishment-related issues. Additionally, pulses are a vital source of livelihood generation for millions of resource-poor farmers practising agriculture in the semi-arid and sub-tropical regions. Limited success achieved through conventional breeding so far in most of the pulse crops will not be enough to feed the ever increasing population. In this context, genomics-assisted breeding (GAB) holds promise in enhancing the genetic gains. Though pulses have long been considered as orphan crops, recent advances in the area of pulse genomics are noteworthy, e.g. discovery of genome-wide genetic markers, high-throughput genotyping and sequencing platforms, high-density genetic linkage/QTL maps and, more importantly, the availability of whole-genome sequence. With genome sequence in hand, there is a great scope to apply genome-wide methods for trait mapping using association studies and to choose desirable genotypes via genomic selection. It is anticipated that GAB will speed up the progress of genetic improvement of pulses, leading to the rapid development of cultivars with higher yield, enhanced stress tolerance and wider adaptability.

The role of diffusion-controlled oscillatory nucleation in the formation of line rock in pegmatite-aplite dikes

USGS Publications Warehouse

Webber, K.L.; Falster, A.U.; Simmons, W.B.; Foord, E.E.

1997-01-01

The George Ashley Block (GAB), located in the Pala Pegmatite District, San Diego County, California, is a composite pegmatite-aplite dike of 8 m thickness displaying striking mineralogical layering in the aphte portion of the dike, referred to as line rock. Rhythmic layering is characterized by garnet-rich bands alternating with albite-quartz-muscovite-rich bands. Cumulus textures are notably absent from the layered portion of the dike. Elongated quartz, megacrysts are oriented perpendicular to the garnet-rich layers and poikilitically include garnet, albite, and muscovite. Calculated crystal-free magma viscosity with 3% H2O is 106.2 Pa s and the calculated settling velocity for garnet is 0??51 cm/year. Conductive cooling calculations based on emplacement of a 650??C dike into 150?? C fractured gabbroic country rock at 1??5 kbar, and accounting for latent heat of crystallization, demonstrate that the line rock portion of the dike cools to 550?? C in about 1 year. Crystal size distribution studies also suggest very rapid nucleation and crystallization. Diffusion-controlled gel crystallization experiments yield textures virtually identical to those observed in the layered aplite, including rhythmic banding, colloform layering, and band discontinuities. Thus, observed textures and calculated magmatic parameters suggest that mineralogical layering in the GAB results from an in situ diffusion-controlled process of oscillatory nucleation and crystallization. We propose that any event that promotes strong undercooling has the potential to initiate rapid heterogeneous nucleation and oscillatory crystal growth, leading to the development of a layer of excluded components in front of the crystallization front, and the formation of line rock.

The geochemistry of uranium and thorium isotopes in the Western Desert of Egypt

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dabous, A.A.

1994-11-01

The concentrations of {sup 238}U, {sup 234}U, {sup 232}Th, and {sup 228}Th have been measured in the groundwaters of the Bahariya and Farafra oases of the Western Desert of Egypt. These waters are characterized by normal amounts of U, but unusually high concentrations of Th. The pattern of variation of the parent isotopes, {sup 238}U and {sup 232}Th, as well as the daughter isotopes, {sup 234}U, {sup 230}Th, and {sup 228}Th, is systematic within and between the two oases. From the unusually consistent distribution of the {sup 234}U/{sup 238}U activity ratios one can conclude that the samples from both oasesmore » are representative of a two-component mixing system. One component, characterized by low U content and a high {sup 234}U/{sup 238}U activity ratio, is typical of deep artesian systems and probably represents flowthrough water derived from the Nubian highlands to the south. The second component is characterized by a greater U concentration and a low activity ratio. This signature is hypothesized as being derived by leaching of downward infiltrating water during pluvial times. The source of the U may be the uraniferous phosphate strata that overly the sandstone aquifer in both oasis areas. Higher Th values are associated with the artesian flow component of the mixing system and suggests that Th-bearing minerals may be abundant in the Nubian sandstone aquifer. The distribution of {sup 230}Th and {sup 228}Th in the water samples supports this interpretation.« less

A preliminary report on the artesian water supply of Memphis, Tennessee

USGS Publications Warehouse

Wells, F.G.

1932-01-01

Memphis is located in the part of the Gulf Coastal Plain known as the Mississippi embayment. It is underlain by unconsolidated sand and clay formations of Tertiary and Cretaceous age. The Wilcox group, of Tertiary age, and the Ripley formation, of Cretaceous age, are excellent aquifers, and all the water consumed in Memphis is derived from them. The maximum pumpage from the Wilcox group was reached about 1920; in that year an estimated average of 37,575,000 gallons a day was pumped. In 1928 the average daily pumpage from the Wilcox group was about 33,984,000 gallons, and in addition to this the Memphis Artesian Water Department pumped an average of 4,616,000 gallons a day from the Ripley formation. The static level at Memphis varies with the pumpage and the stage of the Mississippi River. The original static level was about 235 feet above mean sea level. In 1928 the average static level at the Auction Avenue plant was 202 feet above mean sea level, which was about 33 feet lower than the original level. The yield is therefore about a million gallons a day for each foot of drawdown. The drawdown is not excessive, and additional pumpage can be developed without undue lowering of head. The water from both the Wilcox group and the Ripley formation is fairly soft and has a moderately low content of dissolved mineral matter. The iron content is sufficiently high to be objectionable, but the iron is easily removed by aeration followed by either settling or filtration for removal of sediment.

Ground-water resources of Atascosa County, Texas

USGS Publications Warehouse

Sundstrom, Raymond W.; Follett, C.R.

1950-01-01

Atascosa County, Tex., is underlain by water-bearing sands of Tertiary age that furnish water for domestic and stock supplies throughout the county, for the public supply of all except one of the towns and cities in the county, for irrigation in several localities, for drilling oil wells in the central and southern parts of the county, for washing glass sand in the northern part of the county, and for maintaining several lakes that are used for hunting and fishing. By far the most productive formation is the Carrizo sand, but supplies of considerable magnitude are also obtained from sands in the Mount Selman and Cook Mountain. formations. The rate of withdrawal from the Carrizo sand amounted to about 15,500 acre-feet a year in 1944-45 or an average of about 13.8 million gallons a day. This was about 6,000 acre-feet a year greater in 1944-45 than it was in 1929-30. Of the total amount of water withdrawn in 1944-45 about 6,500 acre-feet a year is largely wasted from uncontrolled flowing wells. If the waste of water from wells in the Carrizo sand were stopped, the consumption of water for useful purposes could be increased about 70 percent without increasing the draft on the underground reservoir. The increase in total withdrawals from the Carrizo sand has been accompanied by a general decline in the artesian head between 1929-30 and 1944 ranging from 3 to 25 feet. On the whole, the evidence shows that the artesian reservoir is not being overdrawn and that it will sustain a somewhat greater draft.

Geology and ground-water conditions in southern Nassau and southeastern Queens Counties, Long Island, New York

USGS Publications Warehouse

Perlmutter, N.M.; Geraghty, J.J.

1963-01-01

Test drilling, electrical logging, and water sampling of 'outpost' and other wells have revealed the existence of a deep confined body of salt water in the Magothy(?) formation beneath southwestern Nassau and southeastern Queens Counties, Long Island, N.Y. In connection with a test-drilling program, cooperatively sponsored by the U.S. Geological Survey, the Nassau County Department of Public Works, and the New York State Water Resources Commission (formerly Water Power and Control Commission), 13 wells ranging in depth from about 130 to 800 feet were drilled during 1952 and 1953 and screened at various depths in the Magothy(?) formation and Jameco gravel. On the basis of the preliminary geologic, hydrologic, and chemical data from these wells, a detailed investigation of ground-water conditions from the water table to the bedrock was begun in a 200-square-mile area in southern Nassau and southeastern Queens Counties. The Inain purposes of the investigation were to delineate the bodies of fresh and salty ground water in the project area, to relate their occurrence and movement to geologic and hydrologic conditions, to estimate the rate of encroachment, if any, of the salty water, and to evaluate the effectiveness of the existing network of outpost wells as detectors of salt-water encroachment. About a million people in the report area, residing mainly in southern Nassau County, are completely dependent on ground water as a source of supply. Fortunately, precipitation averages about 44 inches per year, of which approximately half is estimated to percolate into the ground-water reservoir. The ground water is contained in and moves through eight differentiated geologic units composed of unconsolidated gravel, sand, and clay, of Late Cretaceous, Pleistocene, and Recent age, having a maximum total thickness of about 1,700 feet. The underlying metamorphic and igneous crystalline basement rocks are of Precambrian age and are not water bearing. The water-yielding units from the surface down are (1) the upper Pleistocene deposits, (2) the principal artesian aquifer, composed of the Jameco gravel and Magothy(?) formation, and (3) the Lloyd sand member of the Raritar formation. The confining units are the '20-foot' clay, the Gardiners clay, and the clay member of the Raritan formation. The upper Pleistocene deposits contain an extensive unconfined body of fresh water. Fresh water under artesian conditions is contained in the principal artesian aquifer and the Lloyd sand member. The piezometric surface of the principal artesian aquifer is similar in shape to the south-ward-sloping water table; it ranges in altitude from about sea level to 55 feet above. The chemical quality of the fresh ground water in most of the area in all aquifers is good to excellent, and concentrations of dissolved solids and of chloride generally are below 100 ppm (parts per million) and 10 ppm, respectively. Analyses of water samples from selected wells show no progressive increase in concentration of chloride in most of the area. The data on quality of water have been used to delineate one major and several minor bodies of salty ground water. The wedgeshaped main confined salt-water body, in which the concentration of chloride reaches about 17,000 ppm, is in the Magothy(?) formation and Jameco gravel in extreme southwestern Nassau County and southeastern Queens County. The base of the salt-water wedge is about at the top of the clay member of the Raritan formation. Beneath the barrier beach in south-central and southeastern Nassau County a shallow extension of the main confined salt-water body contains as much as 4,000 ppm of chloride and is separated from the lower main salt-water body by fresh ground water. Shallow, thin bodies of unconfined salty ground water are common in the upper Pleistocene and Recent deposits adjacent to salty surface water in tidal creeks, bays, and the Atlantic

Description and analysis of the geohydrologic system in western Pinal County, Arizona

USGS Publications Warehouse

Hardt, W.F.; Cattany, R.E.

1965-01-01

Western Pinal County is between Phoenix and Tucson in the Basin and Range physiographic province of southern Arizona and consists of about 2,000 square miles of valley floor with low relief surrounded by mountains. It is the second largest agricultural area in the State, and about 25 percent of the ground water pumped in the State is from this area. The study area has been divided into four parts. Three of these--the Casa Grande-Florence area, the Eloy area, and the Stanfield-Maricopa area--are in the lower Santa Cruz basin; the fourth--the Gila River area--is a long narrow strip along the Gila River from the Ashurst-Hayden Dam to the confluence of the Gila and Santa Cruz Rivers. The project was undertaken to provide a better understanding of the ground-water supply in relation to the present and potential water use in this area of extensive ground-water development. The arid climate of western Pinal County--combining high temperatures and low humidity--causes most of the precipitation to be returned to the atmosphere by evapotranspiration, which leaves only a very small part for recharge to the ground-water reservoir. The computed potential evapotranspiration--44. 97 inches--is five times greater than the average precipitation. In general, the subsurface materials in western Pinal County are unconsolidated alluvial deposits underlain by consolidated alluvium and crystalline rocks and bounded by mountains consisting of crystalline and minor sedimentary rocks. The crystalline and sedimentary rocks of the mountains are not known to be water bearing in western Pinal County. The impermeable rocks underlying the basin are called the hydrologic bedrock unit in this report. Although the unit may consist of several different rock types, the distinction between them is relatively unimportant in this study because none of them yield appreciable amounts of water. The lower Santa Cruz basin in western Pinal County is divided into two sections by a buried ridge of the hydrologic bedrock unit, referred to in this report as the Casa Grande ridge. The ridge trends in a north-south direction from the Sacaton to the Silver Reef Mountains. The unconsolidated deposits constitute the main storage reservoir for ground water in western Pins/ County. The deposits are divided into four units---the local gravel unit, the lower sand and gravel unit, the silt and clay unit, and the upper sand and gravel unit--all of which are major water-yielding units except the silt and clay unit. The local gravel unit, which is present only in the western section of the lower Santa Cruz basin, ranges in thickness from 0 to nearly 1,000 feet and is generally a productive aquifer. The lower sand and gravel unit, Which is a heterogeneous mixture of sand, gravel, and clay, ranges in thickness from 0 to about 500 feet. Where the lower sand and gravel unit is overlain by the silt and clay unit, it generally contains water under artesian conditions; where it is not overlain by the silt and clay unit, it is indistinguishable from the upper sand and gravel unit, and the water is under water-table conditions. The silt and clay unit is the least permeable deposit of the unconsolidated alluvium, and ranges in thickness from 0 to about 2, 000 feet. Generally it is less productive than the other units of the unconsolidated alluvium, although it yields moderate amounts of water from numerous thin stringers and lenses of highly permeable sand and gravel. The upper sand and gravel unit is at the land surface in most of the area; it ranges in thickness from less than 50 to about 600 feet. The unit has the highest average permeability of all the unconsolidated alluvial units; however, the permeability of the unit varies vertically and laterally, which results in a wide range of well yields. As of 1964, the static water levels in most wells in the basin were still in the upper sand and gravel unit. However, the unit is being dewatered in most of the basin, and water levels in

Digital-computer model of ground-water flow in Tooele Valley, Utah

USGS Publications Warehouse

Razem, Allan C.; Bartholoma, Scott D.

1980-01-01

A two-dimensional, finite-difference digital-computer model was used to simulate the ground-water flow in the principal artesian aquifer in Tooele Valley, Utah. The parameters used in the model were obtained through field measurements and tests, from historical records, and by trial-and-error adjustments. The model was calibrated against observed water-level changes that occurred during 1941-50, 1951-60, 1961-66, 1967-73, and 1974-78. The reliability of the predictions is good in most parts of the valley, as is shown by the ability of the model to match historical water-level changes.

Effect of Unsaturated Flow on Delayed Response of Unconfined Aquifiers to Pumping

NASA Astrophysics Data System (ADS)

Tartakovsky, G.; Neuman, S. P.

2005-12-01

A new analytical solution is presented for the delayed response process characterizing flow to a partially penetrating well in an unconfined aquifer. The new solution generalizes that of Neuman [1972, 1974] by accounting for unsaturated flow above the water table. Axially symmetric three-dimensional flow in the unsaturated zone is described by a linearized version of Richards' equation in which hydraulic conductivity and water content vary exponentially with incremental capillary pressure head relative to its air entry value (defining the interface between the saturated and unsaturated zones). Unsaturated soil properties are characterized by an exponent κ having the dimension of inverse length and a dimensionless exponent κD = κb where b is initial saturated thickness. Our treatment of the unsaturated zone is similar to that of Kroszynski and Dagan [1975] who however have ignored internal (artesian) aquifer storage. It has been suggested by Boulton [1954, 1963, 1970] and Neuman [1972, 1974], and is confirmed by our solution, that internal storage is required to reproduce the early increase in drawdown characterizing delayed response to pumping in typical aquifers. According to our new solution such aquifers are characterized by relatively large κ_ D values, typically 10 or larger; in the limit as κD tends to infinity (the soil unsaturated water retention capacity becomes insignificant and/or aquifer thickness become large), unsaturated flow becomes unimportant and our solution reduces to that of Neuman. In typical cases corresponding to κD larger than or equal to 10, unsaturated flow is found to have little impact on early and late dimensionless time behaviors of drawdown measured wholly or in part at some distance below the water table; unsaturated flow causes drawdown to increase slightly at intermediate dimensionless time values that represent transition from an early artesian dominated to a late water-table dominated flow regime. The increase in drawdown during this transition period is caused by delayed drainage from the unsaturated zone, whose relatively small effect is superimposed on the more pronounced phenomenon of delay in water table decline relative to artesian head drops below it. Delayed drainage from the unsaturated zone becomes less and less important as κD increases; as it approaches infinity, this effect dies out completely and drawdown is controlled entirely by delayed decline in the water table. The unsaturated zone has major impact on drawdown at intermediate time, and significant impact at early and late times, in the atypical case of small κD values (1 or less), becoming the dominant factor as κD approaches zero (the soil water retention capacity becomes very large and/or saturated thickness becomes insignificant).

Geology and ground-water resources of upper Grande Ronde River Basin, Union County, Oregon

USGS Publications Warehouse

Hampton, E.R.; Brown, S.G.

1964-01-01

The upper Grande Ronde River basin is a 1,400-square-mile area in northeastern Oregon, between the Blue Mountains to the west and the Wallowa Mountains to the east. The area is drained by the Grande Ronde River, which flows northeast through this region and is tributary to the Snake River. The climate is generally moderate; temperature extremes recorded at La Grande are 22?F. below zero and 108?F. above. The average annual precipitation ranges from 13 to 20 inches in the Grande Ronde Valley to . more than 35 inches in the mountain highlands surrounding the valley. The topography of. the area is strongly controlled by the geologic structures, principally those related to block faulting. The terrain ranges from the nearly flat floors of the Grande Ronde and Indian Valleys, whose elevations are 2,600 to about 2,750 feet, to the mountainous uplands, whose average elevations are about 5,000 feet and which have local prominences exceeding 6,500 feet. The rocks in the upper Grande Ronde River basin, from oldest to youngest, are metamorphic rocks of pre-Tertiary age; igneous masses of diorite and granodiorite that intruded the metamorphic rocks; tuff-breccia, welded and silicified tuff, and andesite and dacite flows, of Tertiary age; the Columbia River basalt of Miocene and possibly early Pliocene age; fanglomerate and lacustrine deposits of Pliocene and Pleistocene age; and younger deposits . of alluvium, colluvium, and welded tuff. In the graben known as the Grande Ronde Valley, which is the principal populated district in the area, the valley fill deposits are as thick as 2,000 feet. The valley is bordered by the scarps of faults, the largest of which have displacements of more than 4.000 feet. Most of the wells in the area obtain small to moderate supplies of water from unconfined aquifers in the val1ey fill and alluvial fan deposits. Moderate to large quantities of water are obtained from aquifers carrying artesian water in the fan alluvium and the Columbia River basalt. The available supplies of ground water greatly exceed the relatively small amounts that are being used, and the natural supplies are ..adequate for foreseeable domestic, industrial, irrigation, and municipal. requirements. Yields of future wells probably could be improved appreciably over those of present wells by exercising close attention to subsurface conditions during construction, and by greater use of well screens, gravel envelopes, and well development techniques. The chemical quality of the ground water in general is excellent. All waters sampled are potable and are within the desired ranges of hardness and salinity for most public, industrial, and irrigation uses. The average temperature of shallow ground water drawn from, the alluvial fill was 3?F. above the mean annual air temperature. That of water obtained from the basalt is 6?F. above the temperatures computed from the 'normal' gradient of 1.8?F. per 100 feet of increased depth.

A multi-proxy lake core record from Lago Lungo, Rieti Basin, Lazio, Italy and its relation to human activities in the catchment during the last century

NASA Astrophysics Data System (ADS)

Noble, Paula; Tunno, Irene; Mensing, Scott; Piovesan, Gianluca

2016-04-01

The lakes of the Rieti Basin have experienced extensive human modification dating back to pre-Roman times, yet lake archives indicate that the most profound changes to the aquatic ecosystem have occurred during the last century. Analysis of the upper ˜120 cm segment of a sediment core from Lago Lungo, dating back to ˜1830 CE, show changes in water quality and hydrologic inflow largely attributed to 20th century reclamation and land use activities. Lago Lungo is a shallow, small, eutrophic, hard water lake situated in an intermontaine alluvial plain ˜90 km NE of Rome. It is one of several remnant lakes in a poorly drained wetland area fed by numerous springs. Reclamation activities over the last century have substantially altered the drainage network affecting water delivery to the lakes and their connectivity. There are 3 interesting signals in the core. First, small Stephanodiscus species, associated with hypereutrophic conditions, appear after 1950, peak ˜1990, and may be attributed to increased use of chemical fertilizers and intensification of local agriculture. Elemental proxies from scanning XRF data (abundances of Ti, Si/Ti, and Ca) are consistent with increased eutrophication starting ˜1950. A decline in Stephanodicsus after 1990 reflects some improvement to the water quality following the lake's incorporation into a nature preserve and creation of a narrow vegetation buffer. Intermittent water quality measurements from 1982 onward corroborate the changes in trophic status interpreted from the core record. Second, a large change in the core stratigraphy, elemental geochemistry, and diatom composition occurs ˜1940 and is associated with several major reclamation efforts, including the rerouting of the Santa Susanna channel, which redirected large volumes of artesian inflows away from the lakes and estuarine system. Upstream, dams on the Turano and Salto rivers were also constructed, further affecting hydrological inflows into the basin. From ˜1900-1940 there is an abundance in Aulacoseira, which dominates the adjacent Lago di Ripasottile and may suggest increased connectivity between these two lakes prior to 1940. Third, the largest compositional change occurs ˜1900, before which Cyclotella distinguenda and periphyton are larger components, and there is a lower ratio of diatom frustules to silt. Prior to ˜1900, the lake may have received additional hydrological inputs, including drainage from wetlands that were diverted after 1900. Causally, we put forth 2 hypotheses for the abrupt shift ˜1900. The first hypothesis relates to a period of increased seismic activity circa 1900, including the June 28 1898 earthquake that was felt strongly in the town of Rieti, ˜10 km to the south of Lago Lungo. Seismic activity could have potentially impacted the plain to alter drainage patterns in basin. Alternatively, following the hypothesis of alternative stable states in lakes, the 1900 shift may simply represent an ecological change from a clear water state dominated by macroalgae and periphyton, to a turbid water state dominated by phytoplankton. In this alternative interpretation, the 1900 shift may represent the initial step in a 3-phased succession of lake eutrophication throughout the 1900s, where the initial step predated the 1940 reclamation efforts.

Analysis of the effects of proposed pumping from the principal artesian aquifer, Savannah, Georgia area

USGS Publications Warehouse

Randolph, R.B.; Krause, R.E.

1984-01-01

A two-dimensional finite-difference model of the principal artesian aquifer in the Savannah, Georgia, area, originally developed by Counts and Krause (1976), has been expanded and refined. The model was updated and the grid redesigned to provide more current and accurate detail for ground-water resources management alternatives. Improvements in the definition of the flow system were made possible by the acquisition of additional data in the area and by recently completed regional models that include the area. The model was initially calibrated by using the estimated predevelopment potentiometric surface of 1880. The flow system under predevelopment conditions was sluggish and only 100 cubic feet per second (65 million gallons per day) flowed through the model area. It was then tested for acceptance by using the May 1980 potentiometric surface and corresponding pumping stress of approximately 85 million gallons per day in the Savannah, Georgia-Hilton Head Island, South Carolina, area. The flow through the system under 1980 conditions was about 390 cubic feet per second (250 million gallons per day) and the vertical inflow from the overlying surficial aquifer more than doubled due to formerly rejected recharge that now flows vertically into the aquifer. Calibration was accurate + or - 10 feet. The absolute error per node was 3.4 feet. A hypothetical 25-percent increase in pumpage over the entire area was used to represent a gradual growth in commercial and municipal pumpage over the next 20 to 30 years. The increase produced a maximum decline of 30 feet below the existing water level of 135 feet below sea level at the center of the cone of depression in Savannah, and a 5-foot decline at a radius of 20 miles from the center of the cone of depression. (USGS)

Search for hydraulic connectivity between surface reservoirs and surrounding aquifers in the reservoir-triggered seismic environment (Koyna region, India) using hydrochemical and isotopic signatures

NASA Astrophysics Data System (ADS)

Reddy, D. V.; Nagabhushanam, P.

2016-01-01

Triggered seismicity is an accepted hypothesis in the present days. However, detailed hydrogeological investigations are lacking in the well-known reservoir-triggered seismic (RTS) zones. Here, we made an attempt to understand the direct linkage between the well-known Koyna-Warna reservoirs believed to be under the RTS zone (situated in the Deccan volcanic province (DVP), India) and the surrounding groundwater system up to 250 m deep from the ground surface. Seismic activity in the region started soon after the impoundment of water in the Koyna reservoir and being continued over the last four and a half decades. Though researchers have carried out numerous studies on the Koyna seismicity, no hydrogeological investigations were attempted. Hence, hydrogeological, hydrochemical, and isotopic investigations were carried out for 7 years on groundwaters from 15 deep bore wells (up to 250 m) and two surface reservoir waters to elucidate the direct hydraulic connectivity between them. No appreciable seasonal change was observed in piezometric heads of the artesian wells, but the semi-artesian wells did show fluctuation of ~2 to 12 m during different years, which did not have any relation with the reservoir water levels. No considerable seasonal change in hydrochemistry was observed in individual wells due to the confined nature of the aquifers. The hydrochemical and δ18O data of the studied deep groundwaters and reservoir waters, being different from each other, rule out the possibility of direct hydraulic connectivity between them and surrounding groundwater (up to 250 m), even though favorable topographic conditions exist for linkage. The radiocarbon ages, being incomparable between different well waters, support the inference drawn from hydrochemistry and stable isotope data.

Epidemiology of Cyclospora cayetanensis and other intestinal parasites in a community in Haiti.

PubMed

Lopez, Adriana S; Bendik, Jean M; Alliance, Jean Y; Roberts, Jacquelin M; da Silva, Alexandre J; Moura, Iaci N S; Arrowood, Michael J; Eberhard, Mark L; Herwaldt, Barbara L

2003-05-01

We conducted an exploratory investigation in a community in Haiti to determine the prevalence of Cyclospora cayetanensis infection and to identify potential risk factors for C. cayetanensis infection. In 2001, two cross-sectional stool surveys and a nested case-control study were conducted. In 2002, a follow-up cross-sectional stool survey was conducted among children < or =10 years of age. Stool specimens from study participants and water samples from their wells were examined for Cyclospora and other intestinal parasites. In stools, the prevalence of infection with Cyclospora in persons of all ages decreased from 12% (20 of 167 persons) in February 2001 to 1.1% (4 of 352 persons) in April 2001, a 90.8% decrease. For children < or =10 years of age, the prevalence rates were 22.5% (16 of 71 children) in February 2001, 3.0% (4 of 135 children) in April 2001, and 2.5% (2 of 81 children) in January 2002. Use of the water from the artesian well in the northern region of the community versus the one in the south was the only risk factor associated with Cyclospora infection in multivariate analyses (odds ratio, 18.5; 95% confidence interval, 2.4 to 143.1). The water sample from one of the nine wells or water sources tested (one sample per source) in January 2001, shortly before the investigation began, was positive for Cyclospora by UV fluorescence microscopy and PCR. None of the water samples from the 46 wells or water sources tested during the investigation (one sample per source per testing period, including the artesian wells) were positive for Cyclospora. Further studies are needed to assess the role of water as a possible risk factor for Cyclospora infection in Haiti and other developing countries.

Water quality problems associated with intermittent water supply.

PubMed

Tokajian, S; Hashwa, F

2003-01-01

A controlled study was conducted in Lebanon over a period of 12 months to determine bacterial regrowth in a small network supplying the Beirut suburb of Naccache that had a population of about 3,000. The residential area, which is fed by gravity, is supplied twice a week with chlorinated water from two artesian wells of a confined aquifer. A significant correlation was detected between the turbidity and the levels of heterotrophic plate count bacteria (HPC) in the samples from the distribution network as well as from the artesian wells. However, a negative significant correlation was found between the temperature and the HPC count in the samples collected from the source. A statistically significant increase in counts, possibly due to regrowth, was repeatedly established between two sampling points lying on a straight distribution line but 1 km apart. Faecal coliforms were detected in the source water but none in the network except during a pipe breakage incident with confirmed Escherichia coli reaching 40 CFU/100 mL. However, coliforms such as Citrobacter freundii, Enterobacter agglomerans, E. cloacae and E. skazakii were repeatedly isolated from the network, mainly due to inadequate chlorination. A second controlled study was conducted to determine the effect of storage on the microbial quality of household storage tanks (500 L), which were of two main types - galvanized cast iron and black polyethylene. The mean bacterial count increased significantly after 7 d storage in both tank types. A significant difference was found in the mean HPC/mL between the winter and the summer. Highest counts were found April-June although the maximum temperature was reported later in the summer. A positive correlation was established between the HPC/mL and pH, temperature and storage time.

Conformational properties of a pyridyl-substituted cinnamic acid studied by NMR measurements and computations

NASA Astrophysics Data System (ADS)

Csankó, K.; Forgo, P.; Boros, K.; Hohmann, J.; Sipos, P.; Pálinkó, I.

2013-07-01

Following a preliminary exploration of the conformational space by the PM3 and HF/6-31 G*ab initio methods the conformational characteristics of the scarcely available Z isomer of an α-pyridyl-substituted cinnamic acid dimer [Z-2(3‧-pyridyl)-3-phenylpropanoic acid] was studied by NMR spectroscopy (NOESY measurements) in DMSO(d6), methanol(d4) and chloroform(d1). Calculations predicted that full conjugation was overruled by steric interactions and the rotation of the pyridyl ring was not restricted. NOESY measurements verified indeed that in all three solvents the pyridyl group was virtually freely rotating, while some restriction applied for that of the phenyl group.

Biological indicators for monitoring water quality of MTF canals system

NASA Technical Reports Server (NTRS)

Sethi, S. L.

1975-01-01

Biological models, diversity indexes, were developed to predict environmental effects of NASA's Mississippi test facility (MTF) chemical operations on canal systems in the area. To predict the effects on local streams, a physical model of unpolluted streams was established. The model is fed by artesian well water free of background levels of pollutants. The species diversity and biota composition of unpolluted MTF stream was determined; resulting information will be used to form baseline data for future comparisons. Biological modeling was accomplished by adding controlled quantities or kinds of chemical pollutants and evaluating the effects of these chemicals on the biological life of the stream.

Heavy metal accumulation in lizards living near a phosphate treatment plant: possible transfer of contaminants from aquatic to terrestrial food webs.

PubMed

Nasri, Intissar; Hammouda, Abdessalam; Hamza, Foued; Zrig, Ahlem; Selmi, Slaheddine

2017-05-01

We investigated the accumulation of heavy metals in Bosk's fringe-toed lizards (Acanthodactylus boskianus) living in Gabès region (southeastern Tunisia), in relation to habitat, diet, and distance from the Gabès-Ghannouche factory complex of phosphate treatment. More specifically, we compared the concentrations of cadmium, lead, and zinc in the stomach contents and samples of the liver, kidney, and tail from lizards living in four sites corresponding to different combinations of habitat (coastal dunes vs backshore) and distance from the factory complex (<500 vs 20 km). Examination of stomach contents showed that lizards living on the coastal dunes mainly feed on littoral amphipods, while those living in the backshore feed exclusively on terrestrial invertebrates. The concentrations of heavy metals in lizard tissues were overall positively correlated with those in the preys they ingested. Moreover, there was a general tendency towards increased concentrations of cadmium, lead, and zinc in the samples from lizards living on coastal dunes compared to those from the other sites, although some differences still lacked statistical significance. These results suggest that the highest contamination of lizards living on coastal dunes was probably related to the ingestion of contaminated amphipods. Thus, amphipods and Bosk's fringe-toed lizards seem to provide an important link between the marine and terrestrial food webs, with higher concentrations appearing to accumulate from materials released into the sea rather than the terrestrial environment. With regard to metal distribution among tissues, our results were overall in agreement with previous findings in other reptiles. In particular, cadmium was most concentrated in the liver samples, stressing once more the role of the liver as a storage organ of Cd. Moreover, high concentrations of the three assessed metals were found in the kidney samples, showing the role of the kidney as an active site of heavy metal accumulation.

Evaluation of electron population terms for 4p, 3p, and (2p): how do HOMO and LUMO shrink or expand depending on nuclear charges?

PubMed

Nakanishi, Waro; Hayashi, Satoko; Narahara, Kenji; Yamaki, Daisuke; Hada, Masahiko

2008-01-01

Electron population terms are evaluated for N=Se, S, and O. Calculations are performed on HOMO and LUMO constructed by pure atomic 4p(Se), 3p(S), and 2p(O) orbitals, employing the 6-311+G(3d) and/or 6-311(++)G(3df,3pd) basis sets at the HF, MP2, and DFT (B3 LYP) levels. Se(4+), Se(2+), Se(0), and Se(2-) with the O(h) symmetry are called G(A: Se) and HSe(+), H(2)Se, and HSe(-) with the C(infinityh) or C(2v) symmetry are named G(B: Se), here [G(A+B: Se) in all]. HOMO and LUMO in G(A+B: N) (N=Se, S, and O) satisfy the conditions of the calculations for . The (4p), (3p), and (2p) values correlate well with the corresponding MO energies (epsilon(N)) for all calculation levels employed. Plots of (HOMO) and (LUMO) versus Q(N) (N=Se, S, and O) at the HF and MP2 levels are analyzed as two correlations. However, the plots at the DFT level can be analyzed as single correlation. A regression curve is assumed for the analysis. Behaviors of clarify how valence orbitals shrink or expand depending on Q(N). The applicability of is examined to establish a new method that enables us to analyze chemical shifts with the charge effect separately from others. A utility program derived from the Gaussian 03 (NMRANAL-NH03G) is applied to evaluate and examine the applicability to the NMR analysis.

Systems metabolic engineering of Corynebacterium glutamicum for the production of the carbon-5 platform chemicals 5-aminovalerate and glutarate.

PubMed

Rohles, Christina Maria; Gießelmann, Gideon; Kohlstedt, Michael; Wittmann, Christoph; Becker, Judith

2016-09-13

The steadily growing world population and our ever luxurious life style, along with the simultaneously decreasing fossil resources has confronted modern society with the issue and need of finding renewable routes to accommodate for our demands. Shifting the production pipeline from raw oil to biomass requires efficient processes for numerous platform chemicals being produced with high yield, high titer and high productivity. In the present work, we established a de novo bio-based production process for the two carbon-5 platform chemicals 5-aminovalerate and glutarate on basis of the lysine-hyperproducing strain Corynebacterium glutamicum LYS-12. Upon heterologous implementation of the Pseudomonas putida genes davA, encoding 5-aminovaleramidase and davB, encoding lysine monooxygenase, 5-aminovalerate production was established. Related to the presence of endogenous genes coding for 5-aminovalerate transaminase (gabT) and glutarate semialdehyde dehydrogenase, 5-aminovalerate was partially converted to glutarate. Moreover, residual L-lysine was secreted as by-product. The issue of by-product formation was then addressed by deletion of the lysE gene, encoding the L-lysine exporter. Additionally, a putative gabT gene was deleted to enhance 5-aminovalerate production. To fully exploit the performance of the optimized strain, fed-batch fermentation was carried out producing 28 g L(-1) 5-aminovalerate with a maximal space-time yield of 0.9 g L(-1) h(-1). The present study describes the construction of a recombinant microbial cell factory for the production of carbon-5 platform chemicals. Beyond a basic proof-of-concept, we were able to specifically increase the production flux of 5-aminovalerate thereby generating a strain with excellent production performance. Additional improvement can be expected by removal of remaining by-product formation and bottlenecks, associated to the terminal pathway, to generate a strain being applicable as centerpiece for a bio-based production of 5-aminovalerate.

Geology and ground-water resources of the Rawlins area, Carbon County, Wyoming

USGS Publications Warehouse

Berry, Delmar W.

1960-01-01

The Rawlins area in west-central Carbon County, south-central Wyoming includes approximately 634 square miles of plains and valleys grading into relatively rugged uplifts. The climate is characterized by low precipitation, rapid evaporation, and a wide range of temperature. Railroading and ranching are the principal occupations in the area. The exposed rocks in the area range in age from Precambrian through Recent. The older formations are exposed in the uplifted parts, the oldest being exposed along the apex of the Rawlins uplift. The formations dip sharply away from the anticlines and other uplifts and occur in the subsurface throughout the remainder of the area. The Cambrian rocks (undifferentiated), Madison limestone, Tensleep sandstone, Sun dance formation, Cloverly formation, Frontier formation, and Miocene and Pliocene rocks (undifferentiated) yield water to domestic and stock wells in the area. In the vicinity of the Rawlins uplift, the rocks of Cambrian age, Madison limestone, and Tensleep sandstone yield water to a few public-supply wells. The Cloverly formation yields water to public-supply wells in the Miller Hill and Sage Creek basin area. Wells that tap the Madison limestone, Tensleep sandstone, and Cloverly formation yield water under sufficient artesian pressure to flow at the land surface. The Browns Park formation yields water to springs that supply most of the Rawlins city water and supply water for domestic and stock use. Included on the geologic map are location of wells and test wells, depths to water below land surface, and location of springs. Depths to water range from zero in the unconsolidated deposits along the valley of Sugar Creek at the southern end of the Rawlins uplift to as much as 129 feet below the land surface in the Tertiary sedimentary rocks along the Continental Divide in the southern part of the area. The aquifers are recharged principally by precipitation that falls upon the area, by percolation from streams and ponds, and by movement of ground water from adjacent areas. Water is discharged from the ground-water reservoir by evaporation and transpiration, by seeps and springs, through wells, and by underflow out of the area. Although most water supplies in the area are obtained from springs, some domestic, stock, and public supplies are obtained from drilled wells, many yielding water under artesian pressure, and some flowing. Dissolved solids in the water from several geologic sources, ranging from 181 to 6,660 parts per million (ppm), indicate the varied chemical quality of ground water in the Rawlins area. Water from the Cambrian rocks, Tensleep sandstone, Cloverly formation, Frontier formation, Browns Park formation, and Miocene and Pliocene rocks is generally suitable for domestic and stock use. However, water yielded to the only well sampled in the lower part of the Frontier formation contained a high concentration of fluoride. Water from the rocks mentioned above contains less than 1,000 ppm of dissolved solids but in some places may contain iron in troublesome amounts. Water from the Madison limestone and Tensleep sandstone combined, Permian rocks, and Sundance formation contains more than 1,000 ppm of dissolved solids. Water in the Sundance, Cloverly, and Frontier :formations is very soft. More ground water can be obtained in the Rawlins area than is now being used. Many springs are undeveloped, and water can be obtained from additional wells without unduly lowering ground-water levels.

Summary of ground-water hydrology of the Cambrian-Ordovician aquifer system in the northern Midwest, United States: A in Regional aquifer system analysis

USGS Publications Warehouse

Young, H.L.

1992-01-01

Development of the aquifer system began in various parts of the northern Midwest in the 1860's and 1870's with the drilling of deep, generally flowing artesian wells near Lake Michigan in eastern Wisconsin and northeastern Illinois and along the valleys of the Mississippi River and its tributaries. Initial heads of 186 and 130 feet above Lake Michigan at Milwaukee and Chicago, respectively, have been reported. Large-scale pumping has produced cones of depression in these two areas, with respective head declines of as much as 375 and 900 feet. Other major pumping centers generally have had much smaller declines. The largest withdrawals from the aquifer system were about 180 million gallons per day in each of the major metropolitan areas of Chicago and Minneapolis-St. Paul (Twin Cities). However, the total decline in head in the St. Peter-Prairie du Chien-Jordan aquifer in the Twin Cities by 1980 was only 90 feet because the aquifer is unconfined. Most of the eastern two-thirds of Iowa, where the aquifer system is tightly confined, is characterized by more than 50 feet of head decline, with 200 feet or more at Mason City and the Quad Cities. Pumpage from the Cambrian-Ordovician aquifer system throughout the study area averaged 683 million gallons per day for the period 1976-80. Results of a transient-model simulation show that recharge increased over predevelopment recharge by 447 million gallons per day. Natural discharge decreased by 99 million gallons per day, and 137 million gallons per day was released from aquifer storage. Mineralization of ground water in the aquifer system increases from slightly mineralized calcium magnesium bicarbonate water in the northern recharge areas, through more mineralized, mixed water types with increased sodium and sulfate, to highly mineralized sodium chloride brines in the deeper parts of the structural basins.

Technologies for the Comprehensive Exploitation of the Geothermal Resources of the North Caucasus Region

NASA Astrophysics Data System (ADS)

Alkhasov, A. B.

2018-03-01

Technology for the integrated development of low-temperature geothermal resources using the thermal and water potentials for various purposes is proposed. The heat of the thermal waters is utilized in a low-temperature district heating system and for heating the water in a hot water supply system. The water cooled in heat exchangers enters a chemical treatment system where it is conditioned into potable water quality and then forwarded to the household and potable water supply system. Efficient technologies for removal of arsenic and organic contaminants from the water have been developed. For the uninterrupted supply of the consumers with power, the technologies that use two and more types of renewable energy sources (RESs) have the best prospects. Technology for processing organic waste using the geothermal energy has been proposed. According to this technology, the geothermal water is divided into two flows, one of which is delivered to a biomass conversion system and the other is directed to a geothermal steam-gas power plant (GSGP). The wastewater arrives at the pump station from which it is pumped back into the bed. Upon drying, the biogas from the conversion system is delivered into the combustion chamber of a gas-turbine plant (GTP). The heat of the turbine exhaust gases is used in the GSGP to evaporate and reheat the low-boiling working medium. The working medium is heated in the GSGP to the evaporation temperature using the heat of the thermal water. High-temperature geothermal brines are the most promising for the comprehensive processing. According to the proposed technology, the heat energy of the brines is utilized to generate the electric power at a binary geothermal power station; the electric power is then used to extract the dissolved chemical components from the rest of the brine. The comprehensive utilization of high-temperature brines of the East-Precaucasian Artesian Basin will allow to completely satisfy the demand of Russia for lithium carbonate and sodium chloride.

Engineering Sedimentary Geothermal Resources for Large-Scale Dispatchable Renewable Electricity

NASA Astrophysics Data System (ADS)

Bielicki, Jeffrey; Buscheck, Thomas; Chen, Mingjie; Sun, Yunwei; Hao, Yue; Saar, Martin; Randolph, Jimmy

2014-05-01

Mitigating climate change requires substantial penetration of renewable energy and economically viable options for CO2 capture and storage (CCS). We present an approach using CO2 and N2 in sedimentary basin geothermal resources that (1) generates baseload and dispatchable power, (2) efficiently stores large amounts of energy, and (3) enables seasonal storage of solar energy, all which (5) increase the value of CO2 and render CCS commercially viable. Unlike the variability of solar and wind resources, geothermal heat is a constant source of renewable energy. Using CO2 as a supplemental geothermal working fluid, in addition to brine, reduces the parasitic load necessary to recirculate fluids. Adding N2 is beneficial because it is cheaper, will not react with materials and subsurface formations, and enables bulk energy storage. The high coefficients of thermal expansion of CO2 and N2 (a) augment reservoir pressure, (b) generate artesian flow at the production wells, and (c) produce self-convecting thermosiphons that directly convert reservoir heat to mechanical energy for fluid recirculation. Stored pressure drives fluid production and responds faster than conventional brine-based geothermal systems. Our design uses concentric rings of horizontal wells to create a hydraulic divide that stores supplemental fluids and pressure. Production and injection wells are controlled to schedule power delivery and time-shift the parasitic power necessary to separate N2 from air and compress it for injection. The parasitic load can be scheduled during minimum power demand or when there is excess electricity from wind or solar. Net power output can nearly equal gross power output during peak demand, and energy storage is almost 100% efficient because it is achieved by the time-shift. Further, per-well production rates can take advantage of the large productivity of horizontal wells, with greater leveraging of well costs, which often constitute a major portion of capital costs for geothermal power systems.

Modelling of moisture adsorption for sugar palm (Arenga pinnata) starch film

NASA Astrophysics Data System (ADS)

Jatmiko, Tri Hadi; Poeloengasih, Crescentiana D.; Prasetyo, Dwi Joko; Hernawan

2017-03-01

Sorption characteristic of food products is important for design, optimization, storage and modelling. Sugar palm starch film with two different plasticizers (sorbitol and glycerol) with varied concentration studied for its adsorption isotherm characteristic. The data of adsorption isotherm fitted with GAB, Oswin, Smith and Peleg models. All models describe the experiment data well, but Peleg model is better than the other models on both sugar palm starch film plasticized with sorbitol and glycerol. Moisture sorption of sugar palm starch increased linearly with plasticizer concentration. A new model by taking account of plasticizer concentration describes the experiment data well with an average of coefficients of determination (R2) 0.9913 and 0.9939 for film plasticized with glycerol and sorbitol respectively.

How Trees Interact with Their Hydrologic Environment: a Stable Isotope Study

NASA Astrophysics Data System (ADS)

Gierke, C.; Newton, T.

2012-12-01

The Sacramento Mountains of southeast New Mexico serve as the primary recharge area to adjacent regional aquifers, including the Roswell Artesian Basin, the Tularosa Basin and the Salt Basin. Under pressures of population growth and climate change, land and water managers are interested in identifying land management and forest restoration methods that may increase local and regional groundwater recharge in the high mountains. The Sacramento Mountain Watershed Study is designed to assess the effects of tree thinning in mountain watersheds as an effective method of increasing groundwater recharge. The project employs a soil water balance to quantify the partitioning of local precipitation before and after tree thinning. This study was designed to determine the role that trees play in the hydrologic cycle by using the stable isotopes of oxygen and hydrogen to identify tree water sources. The study is being conducted in a 1st order watershed with no perennial outflow stream where vegetation is dominated by Douglas Fir (Pseudotsuga Menziesii). Ridges are capped with San Andres Limestone while lower slopes and the valley bottom are underlain by the Yeso Formation which is composed of sandstones, mudstones and interbedded carbonate layers. The area has thin soils covering shallow fractured bedrock or epikarst features. Some of the fractures within the epikarst zone provide direct conduits to the larger groundwater system while others are isolated rendering the reservoir inactive. From March 2011 to February 2012, we collected soil and twig samples from which water was extracted by cryogenic vacuum distillation. Soil water was also sampled with passive capillary samplers (PCAPS). The isotopic composition of bulk soil water appears to be controlled by evaporation of snowmelt stored within the soil matrix. The isotopic composition of soil water sampled by wick samplers reflects mixing of non-evaporated rainfall with evaporated bulk soil water. As the monsoon season progressed and cumulative rainfall increased, the isotopic composition of mobile soil water evolved towards that of local precipitation. The isotopic composition of twig water samples resembled that of bulk soil water from March and July 2011. In August, September and into November, twig water isotope values appeared to have both bulk soil water and mobile soil water contributions. The conceptual model that we have developed to explain this phenomenon relies on different infiltration mechanisms for snowmelt and monsoon precipitation which determine where water is stored. Snowmelt infiltrates soil and is stored in shallow soils where trees can easily access it. Short duration, high intensity monsoon rains in the late summer exceed infiltration capacity, exploit preferential flow paths and quickly flush through profiles to recharge groundwater and shallow epikarst reservoirs in the underlying bedrock. As epikarst storage increases, a secondary root system is able to begin exploiting the newly available source in the epikarst feature. The contribution of this secondary source manifests in tree water as an integrated mixture of bulk soil water and mobile soil water. Continued use into November of these two water sources by certain trees while others returned to bulk soil water usage suggests spatial variation in epikarst storage and drainage.

Source and mobility of Rare Earth Elements in a sedimentary aquifer system: Aquitaine basin (Southern France)

NASA Astrophysics Data System (ADS)

Negrel, P. J.; Petelet-Giraud, E.; Millot, R.; Malcuit, E.

2011-12-01

The study of rare earth elements (REEs) in natural waters initially involved an examination of their occurrence and behavior in seawater and coastal waters such as estuaries. Since the 1990s, REE geochemistry has been applied to continental waters such as rivers and lakes and groundwaters. Rare earth elements) are of great interest because of their unique characteristics and have been used in the study of many geological processes like weathering and water-rock interaction processes, provenance of sediments, etc... With the evolution of analytical techniques like new generation ICP-MS, much attention had been paid towards the water geochemistry of REEs. However, there is a need of more investigations devoted to REEs in large groundwater systems, especially on the understanding of the distribution of REEs and their evolution in such systems. In this frame, large sedimentary aquifer systems often constitute strategic water resources for drinking water supply, agriculture irrigation and industry, but can also represent an energetic resource for geothermal power. Large water abstractions can induce complete modification of the natural functioning of such aquifer systems. These large aquifer systems thus require water management at the basin scale in order to preserve both water quantity and quality. The large Eocene Sand aquifer system of the Aquitaine sedimentary basin was studied through various hydrological, chemical and isotopic tools. This system extends over 116,000 km2 in the South west part of the French territory. The aquifer being artesian in the west of the district and confined with piezometric levels around 250-m depth in the east. The 'Eocene Sands', composed of sandy Tertiary sediments alternating with carbonate deposits, is a multi-layer system with high permeability and a thickness of several tens of metres to a hundred metres. The Eocene Sand aquifer system comprises at least five aquifers: Paleocene, Eocene infra-molassic sands (IMS), early Eocene, middle Eocene, and late Eocene. One important feature, in these confined systems isolated from anthropogenic influence, is the range in salinities by a factor of 10, from 250 mg/L up to 2.5 g/L. The ΣREE, in the range 2-54 ng/L, with a dependence on salinity when expressed in % HCO3 or SO4, reflect the carbonate or evaporite source of REEs. The UCC normalized-REE patterns show a large variability as exemplified by the REE flat patterns-low SREE associated with salinity controlled by HCO3. In the present work, the REEs are investigated in terms of saturation indices, speciation modelling, REE patterns in order to recognize the aquifer type hosting groundwater and decipher the origin of the salinity of the groundwater as some part of the aquifer display in the groundwater concentration of chemical element exceeding the drinking water standard (SO4, F...). Such high concentrations of naturally-occurring substances (e.g. unaffected by human activities) can have negative impacts on groundwater thresholds and deciphering their origin by means of geochemical tools like REE is a remaining challenge.

Water Levels In Major Artesian Aquifers Of The New Jersey Coastal Plain, 1988

USGS Publications Warehouse

Rosman, Robert; Lacombe, Pierre J.; Storck, Donald A.

1995-01-01

Water levels in 1,251 wells in the New Jersey Coastal Plain, Philadelphia County, Pennsylvania, and Kent and New Castle Counties, Delaware, were measured from October 1988 to February 1989 and compared with 1,071 water levels measured from September 1983 to May 1984. Water levels in 916 of the wells measured in the 1983 study were remeasured in the 1988 study. Alternate wells were selected to replace wells used in 1983 that were inaccessible at the time of the water-level measurements in 1988 or had been destroyed. New well sites were added in strategic locations to increase coverage where possible. Large cones of depression have formed or expanded in the nine major artesian aquifers that underlie the New Jersey Coastal Plain. Water levels are shown on nine potentiometric-surface maps. Hydrographs for observation wells typically show water-level declines for 1983, through 1989. In the confined Cohansey aquifer, the lowest water level, 20 feet below sea level, was measured in a well located at Cape May City Water Department, Cape May County. Water levels in the Atlantic City 800-foot sand declined as much as 21 feet at Ventnor, Atlantic County, over the 6-year period from the 1983 study to this study for 1988. Water levels in the Piney Point aquifer were as low as 56 feet below sea level at Seaside Park, Ocean County; 45 feet below sea level in southern Cumberland County; and 28 feet below sea level at Margate, Atlantic County. Water levels in the Vincentown aquifer did not change over the 6-year period. The lowest water levels in the Wenonah-Mount Laurel aquifer and the Englishtown aquifer system were 218 feet and 256 feet below sea level, respectively. Large cones of depression in the Potomac- Raritan-Magothy aquifer system are centered in the Camden County area and the Middlesex and Monmouth County area. Water levels declined as much as 46 feet in these areas over the 6-year period.

Development of ground-water supplies at Mississippi test facility, Hancock County, Mississippi

USGS Publications Warehouse

Newcome, Roy

1967-01-01

Potable and industrial water supplies at the National Aeronautics and Space Administration's Mississippi Test Facility in Hancock County, Miss., are obtained from large-capacity wells that tap southward-dipping water-bearing sands of Miocene and Pliocene age. The fresh-water-bearing section is 2,000-3,000 feet thick in the area, and individual aquifers are as thick as 450 feet. Aquifer thickness is not constant over large areas, however; and 100 feet is a more common thickness. Three wells installed for potable water supply are 1,434-1,524 feet deep and have produced 1,100-2,500 gpm (gallons per minute) by natural flow. Artesian pressure is sufficient to provide a static head as high as 90 feet above land surface. Planned use rate for two of the wells is about 600 gpm each and for the third, 1,250 gpm. Water for cooling Saturn rocket test-stand deflectors is obtained from three wells 1,873, 1,695, and 672 feet deep. The production rates of these wells are 3,100, 4,500, and 5,000 gpm, respectively; the wells are capable of supplying 7.5 million gallons in a 10-hour period (18 million gallons per day). Artesian head for the aquifers tapped by these wells ranges from 104 feet above land surface for the deepest aquifer to 15 feet for the shallowest. Aquifer transmissibilities determined in pumping tests range from 81,000 to 200,000 gallons per day per foot. Specific capacities of the wells range from a 15 to 47 gpm per foot of drawdown. Water from the supply wells is soft and of good quality. Dissolved solids range from 236 to 315 parts per million. The water is a sodium bicarbonate type, with high pH. The concentration of iron is less than 0.3 part per million. Water temperatures range from 79?F in the shallowest supply well to 100?F in the deepest.

Climate impact on groundwater systems: the past is the key to the future

NASA Astrophysics Data System (ADS)

van der Ploeg, Martine; Cendón, Dioni; Haldorsen, Sylvi; Chen, Jinyao; Gurdak, Jason; Tujchneider, Ofelia; Vaikmäe, Rein; Purtschert, Roland; Chkir Ben Jemâa, Najiba

2013-04-01

Groundwater is a significant part of the global hydrological cycle and supplies fresh drinking water to almost half of the world's population. While groundwater supplies are buffered against short-term effects of climate variability, they can be impacted over longer time scales through changes in precipitation, ,evaporation, recharge rate, melting of glaciers or permafrost, vegetation, and land-use. Moreover, uncontrolled groundwater extraction has and will lead to irreversible depletion of fresh water resources in many areas. The impact of climate variability and groundwater extraction on the resilience of groundwater systems is still not fully understood (Green et al. 2011). Groundwater stores environmental and climatic information acquired during the recharge process, which integrates different signals, like recharge temperature, origin of precipitation, and dissolved constituents. This information can be used to estimate palaeo recharge temperatures, palaeo atmospheric dynamics and residence time of groundwater within the aquifer (Stute et al. 1995, Clark and Fritz 1997, Collon et al. 2000, Edmunds et al. 2003, Cartwright et al. 2007, Kreuzer et al. 2009, Currell et al. 2010, Raidla et al. 2012, Salem et al. 2012). The climatic signals incorporated by groundwater during recharge have the potential to provide a regionally integrated proxy of climatic variations at the time of recharge. Groundwater palaeoclimate information is affected by diffusion-dispersion processes (Davison and Airey, 1982) and/or water-rock interaction (Clark and Fritz, 1997), making palaeoclimate information deduced from groundwater inherently a low resolution record. While the signal resolution can be limited, recharge follows major climatic events, and more importantly, shows how those aquifers and their associated recharge varies under climatic forcing. While the characterization of groundwater resources, surface-groundwater interactions and their link to the global water cycle are an important focus, little attention has been given to groundwater as a potential record of past climate variations. A groundwater system's history is vital to forecast its vulnerability under future and potentially adverse climatic changes. By processing groundwater information from vast regions and different continents, recharge and palaeoclimate can be correlated at a global scale. To successfully evaluate the sustainability of groundwater resources, "the past is the key to the future". To address the identified lack of palaeoclimatic data available from groundwater studies, a global collaboration has been set-up in 2011 called Groundwater@Global Palaeoclimate Signals (www.gw-gps.com), and has already more than 70 participants from 5 continents. Since 2012 G@GPS receives seed funding to support meetings by the International Geoscience Programme, the International Union for Quaternary Research and UNESCO-GRAPHIC International Hydrologic Project. This collaboration targets groundwater basins on five continents —Africa, America, Asia, Australia, Europe — containing vast groundwater resources with an estimated dependence of tens of millions of people. We will present G@GPS, show examples from groundwater basins, and discuss possibilities to integrate groundwater information from these basins. References Cartwright, I. et al. 2007. Consraining modern and historical recharge from bore hydrographs, 3H, 14C, and chloride concentrations: Applications to dual-porosity aquifers in dryland salinity areas, Murray Basin, Australia. J. Hydrol. 332: 69-92. Clark, I. and P. Fritz. 1997. Environmental isotopes in hydrogeology, Lewis Publishers. Collon, P. et al. 2000. 81Kr in the Great Artesian Basin, Australia: a new method for dating very old groundwater. Earth and Planetary Science Letters 182: 103-113. Currell, M. J. et al. 2010. Recharge history and controls on groundwater quality in the Yuncheng Basin, north China, J. Hydrol. 385: 216-229. Davison, M. R. and P. L. Airey. 1982. The effect of dispersion on the establishment of a paleoclimatic record from groundwater. J. Hydrol. 58: 131-147. Edmunds, W. M. et al. 2003. Groundwater evolution in the Continental Intercalaire aquifer of southern Algeria and Tunisia: trace element and isotopic indicators, Applied Geochemistry 18: 805-822. Green, T.R. et al. 2011. Beneath the surface of global change: Impacts of climate change on groundwater. J. Hydrol 405: 532-560. Kreuzer, A. M. et al. 2009. A record of temperature and monsoon intensity over the past 40 kyr from groundwater in the North China Plain, Chemical Geology 259: 168-180. Raidla, V., Kirsimäe, K., Vaikmäe, R., Kaup, E., and Martma, T., 2012, Carbon isotope systematics of the Cambrian-Vendian aquifer system in the northern Baltic Basin: Implications to the age and evolution of groundwater: Applied Geochemistry, v. 27(10), p. 2042-2052. Salem, S.B.H., Chkir, N., Zouari, K., Cognard-Plancq , A. L., Valles, V, and Marc, V., 2012, Natural and artificial recharge investigation in the Zéroud Basin,Central Tunisia: impact of Sidi Saad Dam storage. Environmental Earth Sciences, v., 66, p. 1099-1110. Stute M., Forster M., Frischkorn H., Serejo A., Clark J. F., Schlosser P., Broecker W. S., and Bonani G. (1995) Cooling of tropical Brazil (5 °C) during the Last Glacial Maximum. Science 269, 379-383.

Magnetic properties of MnF3

NASA Astrophysics Data System (ADS)

Choi, Baeksoon; Kim, Changsoo; Park, Sejun; Lee, Soonchil

2015-03-01

MnF3 which is A-type antiferromagnetic material has been reported to show the negative thermal expansion (NTE) below Neel temperature. In this work, the temperature and magnetic field dependence of the magnetization of MnF3 was measured to find the spin order. The M(T) curve measured by NMR fits well with the theory for antiferromagnet with anisotropy, T2 e(-βG), and the measured energy gab(EG) is about 30 K. The M(H) curve shows that a ferromagnetic phase is mixed with the antiferromagnetic phase below the transition temperature. From the comparison of the M(H) curve at 30 K with theory, the relation between Ka and J1 was obtained which is given by Ka ~ 1.9 J1 + 10 . 3 in absolute temperature unit.

A method of estimating ground-water supplies based on discharge by plants and evaporation from soil: Results of investigations in Escalante Valley, Utah

USGS Publications Warehouse

White, W.N.

1932-01-01

Fluctuations of water levels in wells, if critically studied, may give much information as to the occurrence, movement, and quantity of available ground water. In some localities the ground-water level has been observed to decline during the day and to rise at night, the decline beginning at about the same hour every morning and the rise at about the same hour every night. This daily decline is due to the withdrawal of ground water from the zone of saturation by plants, and the rise at night is due to upward movement of water under slight artesian pressure from permeable beds of sand and gravel at some depth beneath the water table.

Bruneau Known Geothermal Resource Area: an environmental analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Spencer, S.G.; Russell, B.F.

1979-09-01

The Bruneau Known Geothermal Resource Area (KGRA) is part of the Bruneau-Grandview thermal anomaly, the largest geothermal area in the western US. This part of Owyhee County is the driest part of Idaho. The KGRA is associated with the southern boundary fault zone of the Snake River Plain. Thermal water, produced from numerous artesian wells in the region, is supplied from two major aquifers. Ecological concerns include the threatened Astragalus mulfordiae and the numerous birds of prey nesting in the Snake River canyon northwest of the KGRA. Extensive geothermal development may strain the limited health care facilities in the county.more » Ethnographic information suggests that there is a high probability of prehistoric cultural materials being remnant in the Hot Spring locality.« less

Fault Networks in the Northwestern Albuquerque Basin and Their Potential Role in Controlling Mantle CO2 Degassing and Fluid Migration from the Valles Caldera

NASA Astrophysics Data System (ADS)

Smith, J. R.; Crossey, L. J.; Karlstrom, K. E.; Fischer, T. P.; Lee, H.; McGibbon, C. J.

2015-12-01

The Rio Grande rift (RGR) has Quaternary and active volcanism and faulting that provide a field laboratory for examining links between mantle degassing and faults as fluid conduits. Diffuse and spring CO2 flux measurements were taken at 6 sites in the northwestern Albuquerque Basin (NWAB) and Valles caldera geothermal system. All sites progress to the southwest from the 1.25 Ma Valles caldera, down the rift-related Jemez fault network, to intersect with the Nacimiento fault system. Mantle CO2 and He degassing are well documented at 5 of 6 sites, with decreasing 3He/4He ratios away from the caldera. The instrument used to measure CO2 flux was an EGM-4 CO2 gas analyzer (PP systems) with an accumulation chamber. Carbonic springs at Penasco Springs (PS) and San Ysidro (SY), and the carbonate-cemented Sand Hill Fault (SHF) were targeted, all near the western border of the RGR. The SHF has no spring activity, had the smallest maximum flux of all the sites (8 g/m2d), but carbonate along the fault zone (<2 m wide) attest to past CO2 flux. The other two sites are equal distance (30-40 km) between the SHF site and Valles caldera sites. These sites have active carbonic springs that precipitate travertine mounds. Our work suggests these sites reflect intersections of the Nacimiento fault with NE trending faults that connect to the Jemez fault network. The maximum diffuse flux recorded at SY (297 g/m2d) and PS (25 g/m2d) are high, especially along the fault and near springs. At SY and PS the instruments capacity was exceeded (2,400 g/m2d) at 6 of 9 springs. Interpretations indicate a direct CO2 flux through a fault-related artesian aquifer system that is connected to magmatic gases from the caldera. Maximum diffuse flux measurements of Alamo Canyon (20,906 g/m2d), Sulphur Springs (2,400 g/m2d) and Soda Dam (1,882 g/m2d) at Valles caldera geothermal sites are comparable to Yellowstone geothermal systems. We use geospatial analysis and local geologic mapping to examine relationships of CO2 flux to structure. Travertine mounds can create impermeable barriers that modify near-surface degassing patterns, making it difficult to decipher where CO2 and fluids preferentially migrate up the damage zones in the hanging-wall or footwall. Future work will utilize grids to more accurately assess the localized affect fault zones have on CO2 flux rates.

Experimental study and modelling of water sorption/desorption isotherms on two agricultural products: Apple and carrot

NASA Astrophysics Data System (ADS)

Timoumi, S.; Zagrouba, F.; Mihoubi, D.; Tlili, M. M.

2004-12-01

This work is focused on some properties of dried apple (Red Chief) and carrot (Misky). Water sorption isotherms of carrot and apple were investigated at three temperatures: 30, 40 and 60°C, corresponding to drying temperatures, by the static method consisting of the use of different sulphuric acid solutions. Guggenheim-Anderson-de Boer (G.A.B) model is found to describe the experimental curves better than Henderson, Hasley and Oswin models with a correlation coefficient superior to 0.97 for both products. The hysteresis phenomenon was clearly observed in the case of apple isotherms. The experimental data were also used to determine the isosteric enthalpy of desorption of apple and carrot. The isosteric enthalpy of desorption decreased with increase in moisture content and the trend became asymptotic.

Groundwater Visualisation System (GVS): A software framework for integrated display and interrogation of conceptual hydrogeological models, data and time-series animation

NASA Astrophysics Data System (ADS)

Cox, Malcolm E.; James, Allan; Hawke, Amy; Raiber, Matthias

2013-05-01

Management of groundwater systems requires realistic conceptual hydrogeological models as a framework for numerical simulation modelling, but also for system understanding and communicating this to stakeholders and the broader community. To help overcome these challenges we developed GVS (Groundwater Visualisation System), a stand-alone desktop software package that uses interactive 3D visualisation and animation techniques. The goal was a user-friendly groundwater management tool that could support a range of existing real-world and pre-processed data, both surface and subsurface, including geology and various types of temporal hydrological information. GVS allows these data to be integrated into a single conceptual hydrogeological model. In addition, 3D geological models produced externally using other software packages, can readily be imported into GVS models, as can outputs of simulations (e.g. piezometric surfaces) produced by software such as MODFLOW or FEFLOW. Boreholes can be integrated, showing any down-hole data and properties, including screen information, intersected geology, water level data and water chemistry. Animation is used to display spatial and temporal changes, with time-series data such as rainfall, standing water levels and electrical conductivity, displaying dynamic processes. Time and space variations can be presented using a range of contouring and colour mapping techniques, in addition to interactive plots of time-series parameters. Other types of data, for example, demographics and cultural information, can also be readily incorporated. The GVS software can execute on a standard Windows or Linux-based PC with a minimum of 2 GB RAM, and the model output is easy and inexpensive to distribute, by download or via USB/DVD/CD. Example models are described here for three groundwater systems in Queensland, northeastern Australia: two unconfined alluvial groundwater systems with intensive irrigation, the Lockyer Valley and the upper Condamine Valley, and the Surat Basin, a large sedimentary basin of confined artesian aquifers. This latter example required more detail in the hydrostratigraphy, correlation of formations with drillholes and visualisation of simulation piezometric surfaces. Both alluvial system GVS models were developed during drought conditions to support government strategies to implement groundwater management. The Surat Basin model was industry sponsored research, for coal seam gas groundwater management and community information and consultation. The "virtual" groundwater systems in these 3D GVS models can be interactively interrogated by standard functions, plus production of 2D cross-sections, data selection from the 3D scene, rear end database and plot displays. A unique feature is that GVS allows investigation of time-series data across different display modes, both 2D and 3D. GVS has been used successfully as a tool to enhance community/stakeholder understanding and knowledge of groundwater systems and is of value for training and educational purposes. Projects completed confirm that GVS provides a powerful support to management and decision making, and as a tool for interpretation of groundwater system hydrological processes. A highly effective visualisation output is the production of short videos (e.g. 2-5 min) based on sequences of camera 'fly-throughs' and screen images. Further work involves developing support for multi-screen displays and touch-screen technologies, distributed rendering, gestural interaction systems. To highlight the visualisation and animation capability of the GVS software, links to related multimedia hosted online sites are included in the references.

Design of a surface-based factory for the production of life support and technology support products. Phase 2: Integrated water system for a space colony

NASA Technical Reports Server (NTRS)

1989-01-01

Phase 2 of a conceptual design of an integrated water treatment system to support a space colony is presented. This includes a breathable air manufacturing system, a means of drilling for underground water, and storage of water for future use. The system is to supply quality water for biological consumption, farming, residential and industrial use and the water source is assumed to be artesian or subsurface and on Mars. Design criteria and major assumptions are itemized. A general block diagram of the expected treatment system is provided. The design capacity of the system is discussed, including a summary of potential users and the level of treatment required; and, finally, various treatment technologies are described.

May 2012 Groundwater and Surface Water Sampling at the Rio Blanco, Colorado, Site (Data Validation Package)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hutton, Rick

2012-12-01

Annual sampling was conducted at the Rio Blanco, Colorado, site for the Long-Term Hydrologic Monitoring Program May 9-10, 2012, to monitor groundwater and surface water for potential radionuclide contamination. Sampling and analyses were conducted as specified in Sampling and Analysis Plan for the U.S. Department of Energy Office of Legacy Management Sites (LMS/PRO/S04351, continually updated). A duplicate sample was collected from location Johnson Artesian WL. Samples were analyzed for gamma-emitting radionuclides by high-resolution gamma spectrometry and for tritium using the conventional and enrichment methods. Results of this monitoring at the Rio Blanco site demonstrate that groundwater and surface water outsidemore » the site boundaries have not been affected by project-related contaminants.« less

Rhabdochona longleyi sp. n. (Nematoda: Rhabdochonidae) from blind catfishes, Trogloglanis pattersoni and Satan eurystomus (Ictaluridae) from the subterranean waters of Texas.

PubMed

Moravec, F; Huffman, D G

1988-01-01

A new nematode species, Rhabdochona longleyi sp. n. is described from the intestine of two species of blind catfishes, Trogloglanis pattersoni Eigenmann (type host) and Satan eurystomus Hubbs et Bailey (both fam. Ictaluridae, Siluriformes) from the subterranean waters (artesian wells penetrating San Antonio pool of Edwards Aquifer) of Texas, USA. It is characterized largely by the presence of only six anterior teeth in the prostom, simple deirids, by the shape and length of spicules (0.42 to 0.50 mm and 0.093-0.102 mm), shape of the tail tip (rounded), and by filamented eggs. R. longleyi probably adapted to the environment of the aquifer by utilizing available troglobitic crustaceans instead of aquatic insects as an intermediate host.

Calcite-impregnated defluidization structures in littoral sands of Mono Lake, California

USGS Publications Warehouse

Cloud, P.; Lajoie, K.R.

1980-01-01

Associated locally with well-known tufa mounds and towers of Mono Lake, California, are subvertical, concretionary sand structures through which fresh calcium-containing artesian waters moved up to sites of calcium carbonate precipitation beneath and adjacent to the lake. The structures include closely spaced calcite-impregnated columns, tubes, and other configurations with subcylindrical to bizarre cross sections and predominantly vertical orientation in coarse, barely coherent pumice sands along the south shore of the lake. Many structures terminate upward in extensive calcareous layers of caliche and tufa. Locally they enter the bases of tufa mounds and towers. A common form superficially resembles root casts and animal burrows except that branching is mostly up instead of down. Similar defluidization structures in ancient sedimentary rocks have been mistakenly interpreted as fossil burrows.

Geochemistry of the Madison and Minnelusa aquifers in the Black Hills area, South Dakota

USGS Publications Warehouse

Naus, Cheryl A.; Driscoll, Daniel G.; Carter, Janet M.

2001-01-01

The Madison and Minnelusa aquifers are two of the most important aquifers in the Black Hills area because of utilization for water supplies and important influences on surface-water resources resulting from large springs and streamflow- loss zones. Examination of geochemical information provides a better understanding of the complex flow systems within these aquifers and interactions between the aquifers. Major-ion chemistry in both aquifers is dominated by calcium and bicarbonate near outcrop areas, with basinward evolution towards various other water types. The most notable differences in major-ion chemistry between the Madison and Minnelusa aquifers are in concentrations of sulfate within the Minnelusa aquifer. Sulfate concentrations increase dramatically near a transition zone where dissolution of anhydrite is actively occurring. Water chemistry for the Madison and Minnelusa aquifers is controlled by reactions among calcite, dolomite, and anhydrite. Saturation indices for gypsum, calcite, and dolomite for most samples in both the Madison and Minnelusa aquifers are indicative of the occurrence of dedolomitization. Because water in the Madison aquifer remains undersaturated with respect to gypsum, even at the highest sulfate concentrations, upward leakage into the overlying Minnelusa aquifer has potential to drive increased dissolution of anhydrite in the Minnelusa Formation. Isotopic information is used to evaluate ground-water flowpaths, ages, and mixing conditions for the Madison and Minnelusa aquifers. Distinctive patterns exist in the distribution of stable isotopes of oxygen and hydrogen in precipitation for the Black Hills area, with isotopically lighter precipitation generally occurring at higher elevations and latitudes. Distributions of 18O in ground water are consistent with spatial patterns in recharge areas, with isotopically lighter 18O values in the Madison aquifer resulting from generally higher elevation recharge sources, relative to the Minnelusa aquifer. Three conceptual models, which are simplifications of lumped-parameter models, are considered for evaluation of mixing conditions and general ground-water ages. For a simple slug-flow model, which assumes no mixing, measured tritium concentrations in ground water can be related through a first-order decay equation to estimated concentrations at the time of recharge. Two simplified mixing models that assume equal proportions of annual recharge over a range of years also are considered. An ?immediate-arrival? model is used to conceptually represent conditions in outcrop areas and a ?time-delay? model is used for locations removed from outcrops, where delay times for earliest arrival of ground water generally would be expected. Because of limitations associated with estimating tritium input and gross simplifying assumptions of equal annual recharge and thorough mixing conditions, the conceptual models are used only for general evaluation of mixing conditions and approximation of age ranges. Headwater springs, which are located in or near outcrop areas, have the highest tritium concentrations, which is consistent with the immediate-arrival mixing model. Tritium concentrations for many wells are very low, or nondetectable, indicating general applicability of the timedelay conceptual model for locations beyond outcrop areas, where artesian conditions generally occur. Concentrations for artesian springs generally are higher than for wells, which indicates generally shorter delay times resulting from preferential flowpaths that typically are associated with artesian springs. In the Rapid City area, a distinct division of isotopic values for the Madison aquifer corresponds with distinguishing 18O signatures for nearby streams, where large streamflow recharge occurs. Previous dye testing in this area documented rapid ground-water flow (timeframe of weeks) from a streamflow loss zone to sites located several miles away. These results are used to ill

Mapping Glacier Dynamics and Proglacial Wetlands with a Multispectral UAV at 5000m in the Cordillera Blanca, Peru

NASA Astrophysics Data System (ADS)

Wigmore, O.; Mark, B. G.

2015-12-01

The glaciers of the Cordillera Blanca, Peru are rapidly retreating as a result of rising temperatures, transforming the hydrology and impacting the socio-economic and environmental systems of the Rio Santa basin. Documenting the heterogeneous spatial patterns of these changes to understand processes of water storage and flow is hindered by technologic and logistic challenges. Highly complex topography, cloud cover and coarse spatial resolution limit the application of satellite data while airborne data collection remains costly and potentially dangerous. However, recent developments have made Unmanned Aerial Vehicle (UAV) technology a viable and potentially transformative method for studying glacier dynamics and proglacial hydrology. The extreme altitudes (4000-6700m) of the Cordillera Blanca limit the use of 'off the shelf' UAVs. Therefore we developed a low cost multispectral (visible, near-infrared and thermal infrared) multirotor UAV capable of conducting fully autonomous aerial surveys at elevations over 5000m within the glacial valleys of the Cordillera Blanca. Using this platform we have completed repeat aerial surveys (in 2014 and 2015) of the debris covered Llaca Glacier, generating highly accurate 10-20cm DEM's and 5cm orthomosaics using a structure from motion workflow. Analysis of these data reveals a highly dynamic system with some areas of the glacier losing as much as 16m of vertical elevation, while other areas have gained up to 5m of elevation over one year. The magnitude and direction of these changes appears to be associated with the presence of debris free ice faces and meltwater ponds. Additionally, we have mapped proglacial meadow and wetland systems. Thermal mosaics at 10-20cm resolution are providing novel insights into the hydrologic pathways of glacier meltwater including mapping the distribution of artesian springs that feed these wetland systems. The high spatial resolution of these UAV datasets facilitates a better understanding of the spatial variability in and controls on glacier dynamics and proglacial surface/subsurface hydrology within the Cordillera Blanca. We discuss the technical details of the platform, the challenges of conducting UAV surveys at high elevation and share insights from our findings at Llaca Glacier and within the proglacial wetland systems.

Wastewater and Saltwater: Studying the Biogeochemistry and Microbial Activity Associated with Wastewater Inputs to San Francisco Bay

NASA Astrophysics Data System (ADS)

Challenor, T.; Menendez, A. D.; Damashek, J.; Francis, C. A.; Casciotti, K. L.

2014-12-01

Nitrification is the process of converting ammonium (NH­­4+) into nitrate (NO3-), and is a crucial step in removing nitrogen (N) from aquatic ecosystems. This process is governed by ammonia-oxidizing bacteria (AOB) and archaea (AOA) that utilize the ammonia monooxygenase gene (amoA). Studying the rates of nitrification and the abundances of ammonia-oxidizing microorganisms in south San Francisco Bay's Artesian Slough, which receives treated effluent from the massive San Jose-Santa Clara Regional Wastewater Facility, are important for understanding the cycling of nutrients in this small but complex estuary. Wastewater inputs can have negative environmental impacts, such as the release of nitrous oxide, a byproduct of nitrification and a powerful greenhouse gas. Nutrient inputs can also increase productivity and sometimes lead to oxygen depletion. Assessing the relative abundance and diversity of AOA and AOB, along with measuring nitrification rates gives vital information about the biology and biogeochemistry of this important N-cycling process. To calculate nitrification rates, water samples were spiked with 15N-labeled ammonium and incubated in triplicate for 24 hours. Four time-points were extracted across the incubation and the "denitrifier" method was used to measure the isotopic ratio of nitrate in the samples over time. In order to determine relative ratios of AOB to AOA, DNA was extracted from water samples and used in clade-specific amoA PCR assays. Nitrification rates were detectable in all locations sampled and were higher than in other regions of the bay, as were concentrations of nitrate and ammonium. Rates were highest in the regions of Artesian Slough most directly affected by wastewater effluent. AOB vastly outnumbered AOA, which is consistent with other studies showing that AOB prefer high nutrient environments. AOB diversity includes clades of Nitrosospira and Nitrosomonas prevalent in estuarine settings. Many of the sequenced genes are related to estuarine sediment found at other sites in the San Francisco Bay as well as the Chesapeake Bay, China East Sea, and Pearl River Estuary. Our data provide evidence for the path that N takes once entering the estuary and also further characterize the behavior of nitrifying microorganisms in extremely high-nutrient aquatic environments.

Recharge area of the Umbulan spring on the basis of the geology, hydrochemistry and isotopic approach, a high discharge spring of the Bromo-Tengger volcano, East Java

NASA Astrophysics Data System (ADS)

Jourde, H.; Toulier, A.; Baud, B.; De Montety, V.; Leonardi, V.; Pistre, S.; Hendrayana, H.

2017-12-01

Hydrogeochemical analysis and geological mapping, together with water Isotopes analysis, were performed to identify the recharge area of Umbulan spring, a high discharge spring located in the Bromo-Tengger volcano. The volcanic edifice, situated in a tropical climatic context, is the origin of exceptionally high discharge springs in such a volcanic context. This is the case of Umbulan spring whose discharge is about 3500 l/s that supply drinking water to the city of Surabaya, the second biggest city of Indonesia. Groundwater flows through fractured/weathered andesitic lava flow and pyroclastic deposits. The main groundwater outlet corresponds to gravity springs on the flanks of the volcano and to artesian springs in the plain. To improve the hydrogeological knowledge of the study area, the geological mapping of the North volcano flank has been performed to identify the aquiferous formations and refine the geological limits defined in the literature. Based on this geological survey, a new geological map was proposed. Water samples of gravity springs, artesian springs and deep wells were collected with elevations ranging from 40 to 2700 m above sea level, for water major ions elements and stable isotope (δ18O, δD). The meteoric local gradient of δ18O is assessed from the water isotope contents of springs, which are considered as "local pluviometer" representative of the precipitation isotope content at a given elevation corresponding to the mean elevation of their recharge catchment. Based on the analysis of the meteoric local gradient of δ18O, the mean elevation of Umbulan spring recharge catchment ranges between 700 to 1300 m a.s.l, which in agreement with geological observations. Many interrogations subsist but these first hydrogeological data collected in the field allowed to propose a first conceptual model of the Bromo-Tengger volcano, which will help improving the hydrogeological knowledge of the study area and thus preserve and manage the groundwater resource of Bromo-Tengger volcano.

Condition and Health of Rufous Bush Robin (Cercotrichas galactotes) Nestlings in a Polluted Oasis Habitat in Southern Tunisia.

PubMed

Alaya-Ltifi, Leila; Hayder-Benyahya, Nawel; Selmi, Slaheddine

2015-06-01

We investigated whether the proximity to the Gabès-Ghannouche factory complex of phosphate treatment, in south-eastern Tunisia, was associated with notable changes in the condition and health of Rufous bush robin (Cercotrichas galactotes) nestlings hatched in the neighbouring oasis habitat. Results demonstrated that excrements of nestlings hatched in one oasis close to the factory complex contained higher concentrations of lead and zinc than the excrements of nestlings from one oasis situated 20 km away. Furthermore, when effects of age and nestling number in the nest were controlled, nestlings hatched near the factory complex showed reduced tarsus length, rectrix length, haematocrit level and haemoglobin concentration, but higher levels of fluctuating asymmetry compared to those from the more distant oasis. Overall, results suggest that the proximity to the factory complex was associated with increased exposure to metals and deterioration in nestling condition and development.

c-Met must translocate to the nucleus to initiate calcium signals.

PubMed

Gomes, Dawidson A; Rodrigues, Michele A; Leite, M Fatima; Gomez, Marcus V; Varnai, Peter; Balla, Tamas; Bennett, Anton M; Nathanson, Michael H

2008-02-15

Hepatocyte growth factor (HGF) is important for cell proliferation, differentiation, and related activities. HGF acts through its receptor c-Met, which activates downstream signaling pathways. HGF binds to c-Met at the plasma membrane, where it is generally believed that c-Met signaling is initiated. Here we report that c-Met rapidly translocates to the nucleus upon stimulation with HGF. Ca(2+) signals that are induced by HGF result from phosphatidylinositol 4,5-bisphosphate hydrolysis and inositol 1,4,5-trisphosphate formation within the nucleus rather than within the cytoplasm. Translocation of c-Met to the nucleus depends upon the adaptor protein Gab1 and importin beta1, and formation of Ca(2+) signals in turn depends upon this translocation. HGF may exert its particular effects on cells because it bypasses signaling pathways in the cytoplasm to directly activate signaling pathways in the nucleus.

Greenland ice cores tell tales on past sea level changes

NASA Astrophysics Data System (ADS)

Dahl-Jensen, D.

2017-12-01

All the deep ice cores drilled to the base of the Greenland ice sheet contain ice from the previous warm climate period, the Eemian 130-115 thousand years before present. This demonstrates the resilience of the Greenland ice sheet to a warming of 5 oC. Studies of basal material further reveal the presence of boreal forest over Greenland before ice covered Greenland. Conditions for Boreal forest implies temperatures at this time has been more than 10 oC warmer than the present. To compare the paleo-behavior of the Greenland ice sheet to the present in relation to sea level rise knowledge gabs include the reaction of ice streams to climate changes. To address this the international EGRIP-project is drilling an ice core in the center of the North East Greenland Ice Stream (NEGIS). The first results will be presented.

Water sorption equilibria and kinetics of henna leaves

NASA Astrophysics Data System (ADS)

Sghaier, Khamsa; Peczalski, Roman; Bagane, Mohamed

2018-05-01

In this work, firstly the sorption isotherms of henna leaves were determined using a dynamic vapor sorption ( DVS) device at 3 temperatures (30, 40, 50 °C). The equilibrium data were well fitted by the GAB model. Secondly, drying kinetics were measured using a pilot convective dryer for 3 air temperatures (same as above), 3 velocities (0.5, 1, 1.42 m/s) and 4 relative humidities (20, 30, 35, 40%). The drying kinetic coefficients were identified by fitting the DVS and pilot dryer data by Lewis semi-empirical model. In order to compare the obtained kinetic parameters with literature, the water diffusivities were also identified by fitting the data by the simplified solution of fickian diffusion equation. The identified kinetic coefficient was mainly dependent on air temperature and velocity what proved that it represented rather the external transfer and not the internal one.

Effects of plasticizers on sorption and optical properties of gum cordia based edible film.

PubMed

Haq, Muhammad Abdul; Jafri, Feroz Alam; Hasnain, Abid

2016-06-01

The present study aimed to characterize a biodegradable film produced from the polysaccharide of an indigenous plant Cordia myxa. Effect of plasticizer type (Glycerol, Sorbitol, PEG200 and PEG 400) and concentration (0-30 %) was studied on sorption and optical properties of the casted film. Increase in plasticizer concentration resulted in increase in equilibrium moisture content of the film and was supported by GAB model of sorption indicating that isotherms were of Type II. The monolayer value increased with the increase in plasticizer concentration with a peak of 0.93 g.g-1 for glycerol. Addition of plasticizers improved the total color (ΔE) with glycerol showing the highest effects. All films showed resistance to UV light in the range of 280-200 nm. The polysaccharide of the fruit of C.myxa can be used to prepare an edible film with improved properties as compared to other available edible coatings.

Endemic insular and coastal Tunisian date palm genetic diversity.

PubMed

Zehdi-Azouzi, Salwa; Cherif, Emira; Guenni, Karim; Abdelkrim, Ahmed Ben; Bermil, Aymen; Rhouma, Soumaya; Salah, Mohamed Ben; Santoni, Sylvain; Pintaud, Jean Christophe; Aberlenc-Bertossi, Frédérique; Hannachi, Amel Salhi

2016-04-01

The breeding of crop species relies on the valorisation of ancestral or wild varieties to enrich the cultivated germplasm. The Tunisian date palm genetic patrimony is being threatened by diversity loss and global climate change. We have conducted a genetic study to evaluate the potential of spontaneous coastal resources to improve the currently exploited Tunisian date palm genetic pool. Eighteen microsatellite loci of Phoenix dactylifera L. were used to compare the genetic diversity of coastal accessions from Kerkennah, Djerba, Gabès and continental date palm accessions from Tozeur. A collection of 105 date palms from the four regions was analysed. This study has provided us with an extensive understanding of the local genetic diversity and its distribution. The coastal date palm genotypes exhibit a high and specific genetic diversity. These genotypes are certainly an untapped reservoir of agronomically important genes to improve cultivated germplasm in continental date palm.

Change-point analysis data of neonatal diffusion tensor MRI in preterm and term-born infants.

PubMed

Wu, Dan; Chang, Linda; Akazawa, Kentaro; Oishi, Kumiko; Skranes, Jon; Ernst, Thomas; Oishi, Kenichi

2017-06-01

The data presented in this article are related to the research article entitled "Mapping the Critical Gestational Age at Birth that Alters Brain Development in Preterm-born Infants using Multi-Modal MRI" (Wu et al., 2017) [1]. Brain immaturity at birth poses critical neurological risks in the preterm-born infants. We used a novel change-point model to analyze the critical gestational age at birth (GAB) that could affect postnatal development, based on diffusion tensor MRI (DTI) acquired from 43 preterm and 43 term-born infants in 126 brain regions. In the corresponding research article, we presented change-point analysis of fractional anisotropy (FA) and mean diffusivities (MD) measurements in these infants. In this article, we offered the relative changes of axonal and radial diffusivities (AD and RD) in relation to the change of FA and FA-based change-points, and we also provided the AD- and RD-based change-point results.

Geometric phase for a two-level system in photonic band gab crystal

NASA Astrophysics Data System (ADS)

Berrada, K.

2018-05-01

In this work, we investigate the geometric phase (GP) for a qubit system coupled to its own anisotropic and isotropic photonic band gap (PBG) crystal environment without Born or Markovian approximation. The qubit frequency affects the GP of the qubit directly through the effect of the PBG environment. The results show the deviation of the GP depends on the detuning parameter and this deviation will be large for relatively large detuning of atom frequency inside the gap with respect to the photonic band edge. Whereas for detunings outside the gap, the GP of the qubit changes abruptly to zero, exhibiting collapse phenomenon of the GP. Moreover, we find that the GP in the isotropic PBG photonic crystal is more robust than that in the anisotropic PBG under the same condition. Finally, we explore the relationship between the variation of the GP and population in terms of the physical parameters.

Waiweras Warmwasserreservoir - Welche Aussagekraft haben Modelle?

NASA Astrophysics Data System (ADS)

Kühn, Michael; Altmannsberger, Charlotte; Hens, Carmen

2016-06-01

The warm water geothermal reservoir below the village of Waiwera in New Zealand has been known by the native Maori for centuries. Development by the European immigrants began in 1863. Until the year 1969, the warm water flowing from all drilled wells was artesian. Due to overproduction, water up to 50 °C now needs to be pumped to surface. Further, between 1975 and 1976, all warm water seeps on the beach of Waiwera ran dry. Within the context of sustainable water management, hydrogeological models must be developed as part of a management plan. Approaches of varying complexity have been set-up and applied since the 1980s. However, none of the models directly provide all results required for optimal water management. Answers are given simply to parts of the questions, nonetheless improving resource management of the geothermal reservoir.

Notes on the geology of Tibet and adjacent areas; report of the American plate tectonics delegation to the People's Republic of China

USGS Publications Warehouse

Bally, A.W.; Allen, Clarence R.; Geyer, R.B.; Hamilton, W.B.; Hopson, C.A.; Molnar, P.H.; Oliver, J.E.; Opdyke, N.D.; Plafker, George; Wu, F.T.

1980-01-01

Mean water levels in wells across Georgia were from 3.03 feet higher to 11.67 feet lower in 1979 than in 1978, and in some areas were the lowest on record. Water levels in the principal artesian aquifer underwent a long-term decline during the period 1970-79. In some areas water levels dropped more than 10 feet. Wells tapping the Clayton Limestone in the Albany area showed a long-term decline during the period 1970-79, and in some wells water levels dropped more than 20 feet. Water levels in the Cretaceous aquifer system showed little fluctuation during 1979. In the Piedmont area mean water levels remained the same to 4 feet higher in 1979 than in 1978 and showed no long-term trend. (USGS)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

The Army Creek Landfill (ACL), formerly known as the Llangollen Landfill, is located approximately two miles southwest of New Castle, Delaware, and is adjacent to the Delaware Sand and Gravel Landfill Superfund site. The County operated this 44-acre landfill, which accepted municipal wastes, from 1960 until its closure in 1968 when it was filled to capacity. In late 1971, water in a residential well downgradient of the site developed quality problems. Results from a subsequent investigation showed that leachate, most likely originating from the Army Creek and Delaware Sand and Gravel Landfills, was contaminating local aquifers. This lead to themore » installation of a ground water recovery system designed to maintain a ground water divide between the landfills and the Artesian Water Company Wellfield located downgradient of the landfills. The primary contaminants of concern include: VOCs, inorganics, heavy metals, benzene, and chromium.« less

Microarray Analyses Reveal Marked Differences in Growth Factor and Receptor Expression Between 8-Cell Human Embryos and Pluripotent Stem Cells

PubMed Central

Vlismas, Antonis; Bletsa, Ritsa; Mavrogianni, Despina; Mamali, Georgina; Pergamali, Maria; Dinopoulou, Vasiliki; Partsinevelos, George; Drakakis, Peter; Loutradis, Dimitris

2016-01-01

Previous microarray analyses of RNAs from 8-cell (8C) human embryos revealed a lack of cell cycle checkpoints and overexpression of core circadian oscillators and cell cycle drivers relative to pluripotent human stem cells [human embryonic stem cells/induced pluripotent stem (hES/iPS)] and fibroblasts, suggesting growth factor independence during early cleavage stages. To explore this possibility, we queried our combined microarray database for expression of 487 growth factors and receptors. Fifty-one gene elements were overdetected on the 8C arrays relative to hES/iPS cells, including 14 detected at least 80-fold higher, which annotated to multiple pathways: six cytokine family (CSF1R, IL2RG, IL3RA, IL4, IL17B, IL23R), four transforming growth factor beta (TGFB) family (BMP6, BMP15, GDF9, ENG), one fibroblast growth factor (FGF) family [FGF14(FH4)], one epidermal growth factor member (GAB1), plus CD36, and CLEC10A. 8C-specific gene elements were enriched (73%) for reported circadian-controlled genes in mouse tissues. High-level detection of CSF1R, ENG, IL23R, and IL3RA specifically on the 8C arrays suggests the embryo plays an active role in blocking immune rejection and is poised for trophectoderm development; robust detection of NRG1, GAB1, -2, GRB7, and FGF14(FHF4) indicates novel roles in early development in addition to their known roles in later development. Forty-four gene elements were underdetected on the 8C arrays, including 11 at least 80-fold under the pluripotent cells: two cytokines (IFITM1, TNFRSF8), five TGFBs (BMP7, LEFTY1, LEFTY2, TDGF1, TDGF3), two FGFs (FGF2, FGF receptor 1), plus ING5, and WNT6. The microarray detection patterns suggest that hES/iPS cells exhibit suppressed circadian competence, underexpression of early differentiation markers, and more robust expression of generic pluripotency genes, in keeping with an artificial state of continual uncommitted cell division. In contrast, gene expression patterns of the 8C embryo suggest that it is an independent circadian rhythm-competent equivalence group poised to signal its environment, defend against maternal immune rejection, and begin the rapid commitment events of early embryogenesis. PMID:26493868

Preliminary report on the geology, geophysics and hydrology of USBM/AEC Colorado core hole No. 2, Piceance Creek Basin, Rio Blanco County, Colorado

USGS Publications Warehouse

Ege, J.R.; Carroll, R.D.; Welder, F.A.

1967-01-01

Approximately 1,400 feet of continuous core was taken .between 800-2,214 feet in depth from USBM/AEC Colorado core hole No. 2. The drill, site is located in the Piceance Creek basin, Rio Blanco County, Colorado. From ground surface the drill hole penetrated 1,120 feet of the Evacuation Creek Member and 1,094 feet of oil shale in the Parachute Creek Member of the Green River Formation. Oil shale yielding more than 20 gallons per ton occurs between 1,260-2,214 feet in depth. A gas explosion near the bottom of the hole resulted in abandonment of the exploratory hole which was still in oil shale. The top of the nahcolite zone is at 1,693 feet. Below this depth the core contains common to abundant amounts of sodium bicarbonate salt intermixed with oil shale. The core is divided into seven structural zones that reflect changes in joint intensity, core loss and broken core due to natural causes. The zone of poor core recovery is in the Interval between 1,300-1,450 feet. Results of preliminary geophysical log analyses indicate that oil yields determined by Fischer assay compare favorably with yields determined by geophysical log analyses. There is strong evidence that analyses of complete core data from Colorado core holes No. 1 and No. 2 reveal a reliable relationship between geophysical log response and oil yield. The quality of the logs is poor in the rich shale section and the possibility of repeating the logging program should be considered. Observations during drilling, coring, and hydrologic testing of USBM/AEC Colorado core hole No. 2 reveal that the Parachute Creek Member of the Green River Formation is the principal aquifer water in the Parachute Creek Member is under artesian pressure. The upper part of the aquifer has a higher hydrostatic head than, and is hydrologically separated from the lower part of the aquifer. The transmissibility of the aquifer is about 3500 gpd per foot. The maximum water yield of the core hole during testing was about 500 gpm. Chemical analyses of water samples indicate that the content of dissolved solids is low, the principal ions being sodium and bicarbonate. Although the hole was originally cored, to a depth of 2,214 feet, ,the present depth is about 2,100 feet. This report presents a preliminary evaluation of core examination, geophysical log interpretation and hydrological tests from the USBM/AEC Colorado core hole No. 2. The cooperation of the U.S. Bureau of Mines is gratefully acknowledged. The reader is referred to Carroll and others (1967) for comparison of USBM/AEC Col0rado core hole No. 1 with USBM/AEC Colorado core hole No. 2.

Large sedimentary aquifer systems functioning. Constraints by classical isotopic and chemical tools, and REE in the Eocene sand aquifer, SW France

NASA Astrophysics Data System (ADS)

Petelet-Giraud, E.; Negrel, P. J.; Millot, R.; Guerrot, C.; Brenot, A.; Malcuit, E.

2010-12-01

Large sedimentary aquifer systems often constitute strategic water resources for drinking water supply, agriculture irrigation and industry, but can also represent an energetic resource for geothermal power. Large water abstractions can induce complete modification of the natural functioning of such aquifer systems, e.g. with seepage between aquifer layers that can lead to water quality degradation. These large aquifer systems thus require rational water management at the sedimentary basin scale in order to preserve both water quantity and quality. In addition to hydrogeological modelling mainly dealing with water quantity, chemical and isotopic methods were applied to evidence the spatial variability of water characteristics and to turn this into better understanding of hydrosystems functioning. The large Eocene Sand aquifer system of the Adour-Garonne sedimentary basin was studied through various hydrological, chemical and isotopic tools. This system extends over 116,000 km2 (one-fifth of the French territory, located in the South west part). The aquifer being artesian in the west of the district and confined with piezometric levels around 250-m depth in the east. The ‘Eocene Sands’, composed of sandy Tertiary sediments alternating with carbonate deposits, is a multi-layer system with high permeability and a thickness of several tens of metres to a hundred metres..The Eocene Sand aquifer system comprises at least five aquifers: Paleocene, Eocene infra-molassic sands (IMS), early Eocene, middle Eocene, and late Eocene. According to δ18O and δ2H values and estimated 14C ages, both present-day recharge (mainly located in the north of the area) and old recharge (16-35 ky) can be evidenced. High spatial variability was evidenced within a same aquifer layer, with temporal variability over one hydrological cycle limited to a few points located in the recharge areas. These results and especially the very old waters recharged under colder climate combined with the continuous decrease of water levels in the IMS aquifer for instance constitute major indicators to be taken into account for water management at the aquifer system scale. Major elements variability was interpreted in terms of water-rock interactions in these confined systems isolated from anthropogenic influence, with the main role played by evaporites on the water salinity (up to 2.5 g.L-1). Rare Earth Elements (REE) were also analysed in some groundwater samples, resulting in a large variability of UCC normalized-REE patterns, ΣREE ranging from 1.9 to 50.6 µg.L-1, with no dependence on TDS. For instance, interaction with carbonates delivers REE flat patterns and highest ΣREE. The REE patterns and control by key parameters are investigated in order to test REE as a potential supplementary geochemical tracer to recognize the aquifer type hosting groundwater.

Simulation procedure for modeling transient water table and artesian stress and response

USGS Publications Warehouse

Reed, J.E.; Bedinger, M.S.; Terry, J.E.

1976-01-01

The series of computer programs described in this report were designed specifically to model the ground-water regime in sufficient detail to determine the effects of the imposition of various types of stress upon the system, and to display the results in a convenient manner during calibration and when presenting projected data. SUPERMOCK simulates the ground-water system and DATE and HYDROG aid in the display of computed data. During calibration, DATE is especially useful because it has the optional feature of comparing computed data with observed data. Although the programs can be run independently, experience dictates that for best results the three should be run as steps in the same job. English units of inches, feet, and days are used in each of the programs. The units for any parameters not given in the text are clearly specified in the instructions for input to the individual programs. (Woodard-USGS)

The Geologic Story of Colorado National Monument

USGS Publications Warehouse

Lohman, Stanley William

1981-01-01

From 1946 until about 1956 I carried out fieldwork intermittently on the geology and artesian water supply of the Grand Junction area, Colorado, the results of which have been published. The area mapped geologically contains about 332 square miles in the west-central part of Mesa County and includes all of Colorado National Monument. During the field work several successive custodians or superintendents and several park naturalists urged that upon completion of my professional paper I prepare a brief account of the geology of the Monument in terms understandable by laymen, and which could be sold at the Visitor Center. This I was happy to do and there resulted 'The geologic story of Colorado National Monument', published by the Colorado and Black Canyon Natural History Association in cooperation with the National Park Service. This report contained colored sketches by John R. Stacy and a colored cover, but the photographs and many of the drawings were reproduced in black and white.

Arsenic Speciation of Waters from the Aegean Region, Turkey by Hydride Generation: Atomic Absorption Spectrometry.

PubMed

Çiftçi, Tülin Deniz; Henden, Emur

2016-08-01

Arsenic in drinking water is a serious problem for human health. Since the toxicity of arsenic species As(III) and As(V) is different, it is important to determine the concentrations separately. Therefore, it is necessary to develop an accurate and sensitive method for the speciation of arsenic. It was intended with this work to determine the concentrations of arsenic species in water samples collected from Izmir, Manisa and nearby areas. A batch type hydride generation atomic absorption spectrometer was used. As(V) gave no signal under the optimal measurement conditions of As(III). A certified reference drinking water was analyzed by the method and the results showed excellent agreement with the reported values. The procedure was applied to 34 water samples. Eleven tap water, two spring water, 19 artesian well water and two thermal water samples were analyzed under the optimal conditions.

Potentiometric surface of the upper Floridan aquifer in Florida and in parts of Georgia, South Carolina, and Alabama, May 1985

USGS Publications Warehouse

Bush, Peter W.; Barr, G. Lynn; Clarke, John S.; Johnston, Richard H.

1987-01-01

A map, constructed as a part of the Floridan Regional Aquifer-System Analysis (RASA), shows the potentiometric surface of the Upper Floridan aquifer for May 1985. It is based on measurements of water level or artesian pressure made in about 2 ,500 wells during the period May 13 to 24, 1985. Only measurements from tightly cased wells open exclusively to the Upper Floridan aquifer were used to make the map. These included 1,425 wells in Florida, 924 in Georgia, 133 in South Carolina, and 21 in Alabama. The potentiometric surface of the Upper Floridan aquifer changed little between 1980 and 1985. Significant water level declines were observed only in southwest Georgia and west-central Florida. Low rainfall during early 1985 and associated pumping for irrigation caused the declines in both areas. (Lantz-PTT)

Hydrological Changes Induced by Distant Earthquakes at the Lujiang Well in Anhui, China

NASA Astrophysics Data System (ADS)

Ma, Yuchuan; Wang, Guangcai; Tao, Yuechao

2017-10-01

The Lujiang well, a 63 °C artesian well, recorded sustained hydrological changes following the 1999 Chi-Chi M w 7.6, the 2008 Wenchuan M w 7.9, and the 2011 Tohoku M w 9.0 earthquakes, including rises in the water radon concentration, water pressure, discharge and water level, and drops in the water temperature. These hydrological changes are synchronous and have similar amplitudes. The permeability inferred through the tidal response of water level showed insignificant change after the three earthquakes. We attribute the observed hydrological changes to the increase in the vertical recharge on the basis that the water radon concentration of the Lujiang well increased following the increase of recharge to the well; significant vertical flow exists in the well-aquifer system; the well has a lower water radon concentration and a higher water temperature than its adjacent wells with different aquifers.

Potentiometric-surface map of water in the Judith River Formation in the Northern Great Plains area of Montana

USGS Publications Warehouse

Levings, Gary W.

1982-01-01

The potentiometric surface of the Judith River Formation is mapped at a scale of 1:1,000,000. The map is one of a series produced as part of a regional study of aquifers of Cenozoic and Mesozoic age in the northern Great Plains of Montana. The contour interval is 200 feet. Water in the Judith River Formation occurs under water-table and artesian conditions. The direction of regional ground-water movement is from west to east. Water is discharged from the Judith River Formation to the Milk River from near Havre, Montana, to Malta and to the Missouri River south of the Bearpaw and Little Rocky Mountains. The average discharge from 236 wells is about 10 gallons per minute, and the specific capacity of 186 wells averages 0.66 gallon per minute per foot of drawdown. (USGS)

Using multiple geochemical tracers to characterize the hydrogeology of the submarine spring off Crescent Beach, Florida

USGS Publications Warehouse

Swarzenski, P.W.; Reich, C.D.; Spechler, R.M.; Kindinger, J.L.; Moore, W.S.

2001-01-01

A spectacular submarine spring is located about 4 km east of Crescent Beach, FL, in the Atlantic Ocean. The single vent feature of Crescent Beach Spring provides a unique opportunity to examine onshore-offshore hydrogeologic processes, as well as point source submarine ground water discharge. The Floridan aquifer system in northeastern Florida consists of Tertiary interspersed limestone and dolomite strata. Impermeable beds confine the water-bearing zones under artesian pressure. Miocene and younger confining strata have been eroded away at the vent feature, enabling direct hydrologic communication of Eocene ground water with coastal bottom waters. The spring water had a salinity of 6.02, which was immediately diluted by ambient seawater during advection/mixing. The concentration of major solutes in spring water and onshore well waters confirm a generalized easterly flow direction of artesian ground water. Nutrient concentrations were generally low in the reducing vent samples, and the majority of the total nitrogen species existed as NH3. The submarine ground water tracers, Rn-222 (1174 dpm I-1, dpm), methane (232 nM) and barium (294.5 nM) were all highly enriched in the spring water relative to ambient seawater. The concentrations of the reverse redox elements U, V and Mo were expectedly low in the submarine waters. The strontium isotope ratio of the vent water (87Sr/86Sr = 0.70798) suggests that the spring water contain an integrated signature indicative of Floridan aquifer system ground water. Additional Sr isotopic ratios from a series of surficial and Lower Floridan well samples suggest dynamic ground water mixing, and do not provide clear evidence for a single hydrogeologic water source at the spring vent. In this karst-dominated aquifer, such energetic mixing at the vent feature is expected, and would be facilitated by conduit and fractured flow. Radium isotope activities were utilized to estimate flow-path trajectories and to provide information on potential travel times between an onshore well and the spring. Using either 223Ra and 224Ra or 228Ra, and qualifying this approach with several key assumptions, estimates of water mass travel times from an upper Floridan well in Crescent Beach to the submarine vent feature (distance =4050 m) are in the order of ??? 0.01-0.1 m min-1. ?? 2001 Elsevier Science B.V. All rights reserved.

Agonist Met antibodies define the signalling threshold required for a full mitogenic and invasive program of Kaposi's Sarcoma cells.

PubMed

Bardelli, Claudio; Sala, Marilena; Cavallazzi, Umberto; Prat, Maria

2005-09-09

We previously showed that the Kaposi Sarcoma line KS-IMM express a functional Met tyrosine kinase receptor, which, upon HGF stimulation, activates motogenic, proliferative, and invasive responses. In this study, we investigated the signalling pathways activated by HGF, as well as by Met monoclonal antibodies (Mabs), acting as full or partial agonists. The full agonist Mab mimics HGF in all biological and biochemical aspects. It elicits the whole spectrum of responses, while the partial agonist Mab induces only wound healing. These differences correlated with a more prolonged and sustained tyrosine phosphorylation of the receptor and MAPK evoked by HGF and by the full agonist Mab, relative to the partial agonist Mab. Since Gab1, JNK and PI 3-kinase are activated with same intensity and kinetics by HGF and by the two agonist antibodies, it is concluded that level and duration of MAPK activation by Met receptor are crucial for the induction of a full HGF-dependent mitogenic and invasive program in KS cells.

Application of cashew tree gum on the production and stability of spray-dried fish oil.

PubMed

Botrel, Diego Alvarenga; Borges, Soraia Vilela; Fernandes, Regiane Victória de Barros; Antoniassi, Rosemar; de Faria-Machado, Adelia Ferreira; Feitosa, Judith Pessoa de Andrade; de Paula, Regina Celia Monteiro

2017-04-15

Evaluation of cashew gum compared to conventional materials was conducted regarding properties and oxidative stability of spray-dried fish oil. Emulsions produced with cashew gum showed lower viscosity when compared to Arabic gum. The particle size was larger (29.9μm) when cashew gum was used, and the encapsulation efficiency reached 76%, similar to that of modified starch but higher than that for Arabic gum (60%). The oxidation process for the surface oil was conducted and a relative lower formation of oxidation compounds was observed for the cashew gum treatment. GAB model was chosen to describe the moisture adsorption isotherm behaviours. Microparticles produced using Arabic and cashew gums showed greater water adsorption when exposed to higher relative humidities. Microparticles produced using cashew gum were more hygroscopic however encapsulation efficiency were higher and surface oil oxidation were less pronounced. Cashew gum can be further explored as an encapuslant material for spray drying processes. Copyright © 2016 Elsevier Ltd. All rights reserved.

Physical properties of inulin and inulin-orange juice: physical characterization and technological application.

PubMed

Saavedra-Leos, M Z; Leyva-Porras, C; Martínez-Guerra, E; Pérez-García, S A; Aguilar-Martínez, J A; Álvarez-Salas, C

2014-05-25

In this work two systems based on a carbohydrate polymer were studied: inulin as model system and inulin-orange juice as complex system. Both system were stored at different water activity conditions and subsequently characterized. Water adsorption isotherms type II were fitted by the GAB model and the water monolayer content was determined for each system. From thermal analyzes it was found that at low water activities (aw) systems were fully amorphous. As aw increased, crystallinity was developed. This behavior was corroborated by X-ray diffraction. In the inulin-orange juice system, crystallization appears at lower water activity caused by the intensification of the chemical interaction of the low molecular weight species contained in orange juice. Glass transition temperature (Tg), determined by modulated differential scanning calorimeter, decreased with aw. As water is adsorbed, the physical appearance of samples changed which could be observed by optical microscopy and effectively related with the microstructure found by scanning electron microscopy. Copyright © 2014 Elsevier Ltd. All rights reserved.

Obscenity detection using haar-like features and Gentle Adaboost classifier.

PubMed

Mustafa, Rashed; Min, Yang; Zhu, Dingju

2014-01-01

Large exposure of skin area of an image is considered obscene. This only fact may lead to many false images having skin-like objects and may not detect those images which have partially exposed skin area but have exposed erotogenic human body parts. This paper presents a novel method for detecting nipples from pornographic image contents. Nipple is considered as an erotogenic organ to identify pornographic contents from images. In this research Gentle Adaboost (GAB) haar-cascade classifier and haar-like features used for ensuring detection accuracy. Skin filter prior to detection made the system more robust. The experiment showed that, considering accuracy, haar-cascade classifier performs well, but in order to satisfy detection time, train-cascade classifier is suitable. To validate the results, we used 1198 positive samples containing nipple objects and 1995 negative images. The detection rates for haar-cascade and train-cascade classifiers are 0.9875 and 0.8429, respectively. The detection time for haar-cascade is 0.162 seconds and is 0.127 seconds for train-cascade classifier.

Thermodynamic criteria analysis for the use of taro starch spherical aggregates as microencapsulant matrix.

PubMed

Hoyos-Leyva, Javier D; Bello-Pérez, Luis A; Alvarez-Ramirez, J

2018-09-01

Spherical aggregates can be obtained from taro starch by spray-drying without using bonding agents. Accurate information about thermal issues of spherical aggregates can provide valuable information for assessing the application as encapsulant. Spherical aggregates of taro starch were obtained by spray-drying and analyzed using dynamic vapour sorption. The use of the Guggenheim, Anderson and de Boer (GAB) model indicated a Type II isotherm pattern with weaker interactions in the multilayer region. Differential enthalpy and entropy estimates reflected a mesoporous microstructure, implying that energetic mechanisms dominate over transport mechanisms in the sorption process. The limitation by energetic mechanisms was corroborated with enthalpy-entropy compensation estimates. The diffusivity coefficient was of the order of 10 -8  m 2 ·s -1 , which is in line with results obtained for common materials used for encapsulation purposes. The thermodynamic properties and the lack of a bonding agent indicated the viability of spherical aggregates of taro starch for encapsulation of biocompounds. Copyright © 2018 Elsevier Ltd. All rights reserved.

Definition of a Sinkhole hazard methodology in the Pontina Plain (Latium Region, Central Italy)

NASA Astrophysics Data System (ADS)

Teoli, Pamela; Mazza, Roberto; Capelli, Giuseppe

2010-05-01

The work presented here is the continuation of " Sinkhole Project of Latium Region" (2002), carried out by Researchers of the Laboratory of Applied Geology and Hydrogeology of the Department of Geological Sciences of the University "Roma Tre", Rome (Italy), through which were found, in different plain of the whole Region, Sinkhole prone areas, using a methodology based on the superimposition of thematic layers corresponding to geological and anthropogenic breaking factors. In the last years several specific investigations have been conducted by Researchers of the Laboratory in the Pontina Plain, that is located in the south west of the Latium Region, concerning the geological-stratigraphic setting, the sketch of flow in the aquifers located in the Pontine depression, the chemiphysical groundwater characheteristics, the density of wells, the amount of well pumping and piezometric changes. This required the implementation of several piezometric and chemiphysical surveys, the collection and validation of a large number of stratigraphic and geophysical data. All data in the archive have been computerized and the maps vectorized. This makes it possible today to address the analysis with Geographical Information Systems and to start numerical flow simulations, regarding both the heavily drained deep confined aquifer, and the areas subject to the presence of an important water exchange between the recharge area in the Lepini Mountains (carbonatic ridge) and terrigenous aquifers of the plain. Among the main causes that trigger the catastrophic collapses there are, in fact, all the phenomena that cause the mass density reduction through erosion, leaching, dissolution. All these agents are associated with water circulation: flow, velocity, CO2 saturation rate, carbonates saturation rate. The spread in the Pontina plain of deep and high pumping wells, wrongly built without the correct way of progress, and without the realization of cemented portions properly located, can lead to the rise of the artesian groundwater that flows into sandy horizons scarcely thickened, carrying out liquefaction and collapse phenomena. Thus, thanks to the numerous piezometric surveys, different areas have been identified in the plain: artesian wells areas with full water rise, areas with few artesian wells and areas with partial water lift. The analysis of geophysical data has allowed to draw deep profiles that show how along the axis of the plain the roof of carbonates has very changeable heights, due to a complex tectonic evolution. In correspondence to one of the most senior buried structural heights in the carbonate substratum of the plain, a karst cave was intercepted during a drilling on the vertical of a sinkhole opened in 1989, which could be interpreted as a paleospring. The right application of technologies for drilling and completion of the hole, however, has prevented against the recurrence of the phenomenon of collapse. This poster illustrates a matrix calculus implemented by the authors, by which you can come to an assessment of the distribution of Sinkhole hazard in the Pontina Plain. The matrix takes into account different parameters that are related to the breaking causes of the phenomenon. Each parameter is assigned a value (index) representing its variation. The area studied was divided into 150 m square cells, each cell is assigned the value of the Sinkhole hazard index, that is the sum of the various indices assigned to that cell. Such a methodology widely used in other scientific research must be improved by optimizing the values and weights that were assigned to each parameter and implementing the matrix by adding more parameters that influence the phenomenon. A discussion about the importance of these characterizing parameters is presented for further development of the methodology.

Water resources of Spink County, South Dakota

USGS Publications Warehouse

Hamilton, L.J.; Howells, L.W.

1996-01-01

Spink County, an agricultural area of about 1,505 square miles, is in the flat to gently rolling James River lowland of east-central South Dakota. The water resources are characterized by the highly variable flows of the James River and its tributaries and by aquifers both in glacial deposits of sand and gravel, and in sandstone in the bedrock. Glacial aquifers underlie about half of the county, and bedrock aquifers underlie most of the county. The James River is an intermittent prairie stream that drains nearly 8,900 square miles north of Spink County and has an average annual discharge of about 124 cubic feet per second where it enters the county. The discharge is augmented by the flow of Snake and Turtle Creeks, each of which has an average annual flow of about 25 to 30 cubic feet per second. Streamflow is unreliable as a water supply because precipitation, which averages 18.5 inches annually, is erratic both in volume and in distribution, and because the average annual potential evapotranspiration rate is 43 inches. The flow of tributaries generally ceases by summer, and zero flows are common in the James River in fall and winter. Aquifers in glacial drift deposits store nearly 3.3 million acre-feet of fresh to slightly saline water at depths of from near land surface to more than 500 feet below land surface beneath an area of about 760 square miles. Yields of properly developed wells in the more productive aquifers exceed 1,000 gallons per minute in some areas. Withdrawals from the aquifers, mostly for irrigation, totaled about 15,000 acre-feet of water in 1990. Water levels in observation wells generally have declined less than 15 feet over several decades of increasing pumpage for irrigation, but locally have declined nearly 30 feet. Water levels generally rose during the wet period of 1983-86. In Spink County, bedrock aquifers store more than 40 million acre-feet of slightly to moderately saline water at depths of from 80 to about 1,300 feet below land surface. Yields of properly developed wells range from 2 to 600 gallons per minute. The artesian head of the heavily used Dakota aquifer has declined about 350 feet in the approximately 100 years since the first artesian wells were drilled in the county, but water levels have stabilized locally as a result of decreases in the discharge of water from the wells. Initial flows of from 4 gallons per minute to as much as 30 gallons per minute of very hard water can be obtained in the southwestern part of the county, where drillers report artesian heads of nearly 100 feet above land surface. The quality of water from aquifers in glacial drift varies greatly, even within an aquifer. Concentrations of dissolved solids in samples ranged from 151 to 9,610 milligrams per liter, and hardness ranged from 84 to 3,700 milligrams per liter. Median concentrations of dissolved solids, sulfate, iron, and manganese in some glacial aquifers are near or exceed Secondary Maximum Contaminant Levels (SMCL's) established by the U.S. Environmental Protection Agency (EPA). Some of the water from aquifers in glacial drift is suitable for irrigation use. Water samples from aquifers in the bedrock contained concentrations of dissolved solids that ranged from 1,410 to 2,670 milligrams per liter (sum of constituents) and hardness that ranged from 10 to 1,400 milligrams per liter; these concentrations generally are largest for aquifers below the Dakota aquifer. Median concentrations of dissolved solids, sulfate, iron, and manganese in Dakota wells either are near or exceed EPA SMCL's. Dissolved solids, sodium, and boron concentrations in water from bedrock aquifers commonly are too large for the water to be suitable for irrigation use.

Geology and ground-water resources of North Dakota, with a discussion of the chemical character of the water

USGS Publications Warehouse

Simpson, Howard E.; Riffenburg, Harry Buchholz

1929-01-01

Water is the most valuable of the mineral resources. The study of ground waters is therefore clearly within the field of economic geology and constitutes an important part of the work of the geological surveys, both State and national, as defined by law. In the spring of 1911 the investigation of the ground waters of North Dakota was begun by the North Dakota Geological Survey, and the work was assigned to the author of this paper. During each of the three summers 1911, 1912, and 1913 several weeks were devoted by the author to the field work of a general survey. A report on the ground waters of the State was then prepared by him and was transmitted by the director of the North Dakota Geological Survey to the State printing commission for publication. However, owing to lack of available funds the report was not published.A portion of the summer of 1914 was given to a study of artesian conditions in the Souris River Basin. Since that time considerable work has been done in connection with detailed surveys made for a number of cities and villages in an effort to obtain the best available supply of water for public use.During the summer of 1920 arrangements were made by the United States Geological Survey with the North Dakota Geological Survey whereby the author completed the work as fully as possible by correspondence and brought the report up to date.In the spring of 1921 samples of water from 196 sources were collected by the author and J. H. Buchanan and were sent to the United States Geological Survey for analysis. Most of these samples were analyzed by H. B. Riffenburg, who has used the analyses for a description of the chemical character of ground waters in the State. In addition to the analyses of samples collected in connection with the preparation of this report, over 700 partial analyses from different sources were examined. These analyses are not given in this paper, because the location of many of the wells was not stated definitely, and most of the analyses were incomplete. They were useful, however, in confirming the conclusions based on the analyses that are printed, particularly for counties where only a few samples were collected for this report.

Fervidicella metallireducens gen. nov., sp. nov., a thermophilic, anaerobic bacterium from geothermal waters.

PubMed

Ogg, Christopher D; Patel, Bharat K C

2010-06-01

A strictly anaerobic, thermophilic bacterium, designated strain AeB(T), was isolated from microbial mats colonizing a run-off channel formed by free-flowing thermal water from a bore well (registered number 17263) of the Great Artesian Basin, Australia. Cells of strain AeB(T) were slightly curved rods (2.5-6.0x1.0 mum) that stained Gram-negative and formed spherical terminal to subterminal spores. The strain grew optimally in tryptone-yeast extract-Casamino acids medium at 50 degrees C (range 37-55 degrees C) and pH 7 (range pH 5-9). Strain AeB(T) grew poorly on yeast extract (0.2 %) and tryptone (0.2 %) as sole carbon sources, which were obligately required for growth on other energy sources. Growth of strain AeB(T) increased in the presence of various carbohydrates and amino acids, but not organic acids. End products detected from glucose fermentation were ethanol, acetate, CO2 and H2. In the presence of 0.2 % yeast extract, iron(III), manganese(IV), vanadium(V) and cobalt(III) were reduced, but not sulfate, thiosulfate, sulfite, elemental sulfur, nitrate or nitrite. Iron(III) was also reduced in the presence of tryptone, peptone, Casamino acids and amyl media (Research Achievement), but not starch, xylan, chitin, glycerol, ethanol, pyruvate, benzoate, lactate, acetate, propionate, succinate, glycine, serine, lysine, threonine, arginine, glutamate, valine, leucine, histidine, alanine, aspartate, isoleucine or methionine. Growth was inhibited by chloramphenicol, streptomycin, tetracycline, penicillin, ampicillin and NaCl concentrations >2 %. The DNA G+C content was 35.4+/-1 mol%, as determined by the thermal denaturation method. 16S rRNA gene sequence analysis indicated that strain AeB(T) is a member of the family Clostridiaceae, class Clostridia, phylum 'Firmicutes', and is positioned approximately equidistantly between the genera Sarcina, Anaerobacter, Caloramator and Clostridium (16S rRNA gene similarity values of 87.8-90.9 %). On the basis of 16S rRNA gene sequence comparisons and physiological characteristics, strain AeB(T) is considered to represent a novel species in a new genus, for which the name Fervidicella metallireducens gen. nov., sp. nov. is proposed; the type strain is AeB(T) (=JCM 15555(T)=KCTC 5667(T)).

Interleukin 6 inhibits proliferation and, in cooperation with an epidermal growth factor receptor autocrine loop, increases migration of T47D breast cancer cells.

PubMed

Badache, A; Hynes, N E

2001-01-01

Interleukin (IL)-6, a multifunctional regulator of immune response, hematopoiesis, and acute phase reactions, has also been shown to regulate cancer cell proliferation. We have investigated IL-6 signaling pathways and cellular responses in the T47D breast carcinoma cell line. The IL-6-type cytokines, IL-6 and oncostatin M, simultaneously inhibited cell proliferation and increased cell migration. In T47D cells, IL-6 stimulated the activation of Janus-activated kinase 1 tyrosine kinase and signal transducers and activators of transcription (STAT) 1 and STAT3 transcription factors. Expression of dominant negative STAT3 in the cells strongly reduced IL-6-mediated growth inhibition but did not prevent IL-6-induced cell migration. IL-6 treatment led to activation of the mitogen-activated protein kinase (MAPK) and the phosphatidylinositol 3'-kinase (PI3K) pathways. Inhibition of MAPK or PI3K activity reversed IL-6- and oncostatin M-stimulated migration. Because cross-talk between cytokine receptors and members of the ErbB family of receptor tyrosine kinases has been described previously, we have examined their interaction in T47D cells. Down-regulation of ErbB receptor activity, through the use of specific pharmacological inhibitors or dominant negative receptor constructs, revealed that IL-6-induced MAPK activation was largely dependent on epidermal growth factor (EGF) receptor activity, but not on ErbB-2 activity. Using a monoclonal antibody that interferes with EGF receptor-ligand interaction, we have shown that in T47D cells, IL-6 cooperates with an EGF receptor autocrine activity loop for signaling through the MAPK and PI3K pathways and for cell migration. Both the tyrosine phosphatase SHP-2 and the multisubstrate docking molecule Gab1, which are potential links between IL-6 and the MAPK/PI3K pathways, were constitutively associated with the active EGF receptor. On IL-6 stimulation, SHP-2 and Gab1 were recruited to the gp130 subunit of the IL-6 receptor and tyrosine phosphorylated, allowing downstream signaling to the MAPK and PI3K pathways. Thus, in T47D breast carcinoma cells, IL-6 acts in synergy with EGF receptor autocrine activity to signal through the MAPK/PI3K pathways. Cooperation between IL-6 and the EGF receptor in T47D breast carcinoma cells illustrates how a combination of multiple stimuli, either exogenous or endogenous, may result in synergistic cellular responses.

Moisture Adsorption Isotherm and Storability of Hazelnut Inshells and Kernels Produced in Oregon, USA.

PubMed

Jung, Jooyeoun; Wang, Wenjie; McGorrin, Robert J; Zhao, Yanyun

2018-02-01

Moisture adsorption isotherms and storability of dried hazelnut inshells and kernels produced in Oregon were evaluated and compared among cultivars, including Barcelona, Yamhill, and Jefferson. Experimental moisture adsorption data fitted to Guggenheim-Anderson-de Boer (GAB) model, showing less hygroscopic properties in Yamhill than other cultivars of inshells and kernels due to lower content of carbohydrate and protein, but higher content of fat. The safe levels of moisture content (MC, dry basis) of dried inshells and kernels for reaching kernel water activity (a w ) ≤0.65 were estimated using the GAB model as 11.3% and 5.0% for Barcelona, 9.4% and 4.2% for Yamhill, and 10.7% and 4.9% for Jefferson, respectively. Storage conditions (2 °C at 85% to 95% relative humidity [RH], 10 °C at 65% to 75% RH, and 27 °C at 35% to 45% RH), times (0, 4, 8, or 12 mo), and packaging methods (atmosphere vs. vacuum) affected MC, a w , bioactive compounds, lipid oxidation, and enzyme activity of dried hazelnut inshells or kernels. For inshells packaged at woven polypropylene bag, MC and a w of inshells and kernels (inside shells) increased at 2 and 10 °C, but decreased at 27 °C during storage. For kernels, lipid oxidation and polyphenol oxidase activity also increased with extended storage time (P < 0.05), and MC and a w of vacuum packaged samples were more stable during storage than those atmospherically packaged ones. Principal component analysis showed correlation of kernel qualities with storage condition, time, and packaging method. This study demonstrated that the ideal storage condition or packaging method varied among cultivars due to their different moisture adsorption and physicochemical and enzymatic stability during storage. Moisture adsorption isotherm of hazelnut inshells and kernels is useful for predicting the storability of nuts. This study found that water adsorption and storability varied among the different cultivars of nuts, in which Yamhill was less hygroscopic than Barcelona and Jefferson, thus more stable during storage. For ensuring food safety and quality of nuts during storage, each cultivar of kernels should be dried to a certain level of MC. Lipid oxidation and enzyme activity of kernel could be increased with extended storage time. Vacuum packaging was recommended to kernels for reducing moisture adsorption during storage. © 2018 Institute of Food Technologists®.

Ground-water hydrology of the San Pitch River drainage basin, Sanpete County, Utah

USGS Publications Warehouse

Robinson, Gerald B.

1971-01-01

The San Pitch River drainage basin in central Utah comprises an area of about 850 square miles; however, the investigation was concerned primarily with the Sanpete and Arapien Valleys, which comprise about 250 square miles and contain the principal ground-water reservoirs in the basin. Sanpete Valley is about 40 miles long and has a maximum width of 13 miles, and Arapien Valley is about 8 miles long and 1 mile wide. The valleys are bordered by mountains and plateaus that range in altitude from 5,200 to 11,000 feet above mean sea level.The average annual precipitation on the valleys is about 12 inches, but precipitation on the surrounding mountains reaches a maximum of about 40 inches per year. Most of the precipitation on the mountains falls as snow, and runoff from snowmelt during the spring and summer is conveyed to the valleys by numerous tributaries of the San Pitch River. Seepage from the tributary channels and underflow beneath the channels are the major sources of recharge to the ground-water reservoir in the valleys.Unconsolidated valley fill constitutes the main ground-water reservoir in Sanpete and Arapien Valleys. The fill, which consists mostly of coalescing alluvial fans and flood deposits of the San Pitch River, ranges in particle size from clay to boulders. Where they are well sorted, these deposits yield large quantities of water to wells.Numerous springs discharge from consolidated rocks in the mountains adjacent to the valleys and along the west margin of Sanpete Valley, which is marked by the Sevier fault. The Green River Formation of Tertiary age and several other consolidated formations yield small to large quantities of water to wells in many parts of Sanpete Valley. Most water in the bedrock underlying the valley is under artesian pressure, and some of this water discharges upward into the overlying valley fill.The water in the valley fill in Sanpete Valley moves toward the center of the valley and thence downstream. The depth to water along parts of the sides of the valley is more than 100 feet, but in much of the central part of the valley, the water level is at or above the land surface. The valley fill pinches out in the southern part of the valley, and most of the ground water moves to the surface, where it discharges into the San Pitch River or is consumed by evapotranspiration.Ground water is discharged principally by wells, springs, and evapotranspiration. The discharge from wells varies considerably from year to year because most of the water is used for irrigation, and the wells are used only as necessary to supplement the available surface-water supply. Thus, in 1965, a year of above-normal precipitation, the discharge from wells was 12,000 acre-feet, whereas in 1966, a year of below-normal precipitation, the wells discharged 21,000 acre-feet. The discharge from springs during 1966 was estimated to be 36,000 acre-feet, and an additional 113,000 acre-feet of water was discharged by phreatophytes.Water levels in the valleys, for the most part, fluctuate in direct response to variations in precipitation, and the discharge from wells has had little long-term effect on water levels. Approximately 3 million acre-feet of water available to wells is stored in the upper 200 feet of saturated valley fill.The ground water in most parts of the valleys is fresh and suitable for public supply and irrigation. The Green River and Crazy Hollow Formations may, in some places, yield slightly or moderately saline water.

Water resources of Sweetwater County, Wyoming

USGS Publications Warehouse

Mason, Jon P.; Miller, Kirk A.

2004-01-01

Sweetwater County is located in the southwestern part of Wyoming and is the largest county in the State. A study to quantify the availability and describe the chemical quality of surface-water and ground-water resources in Sweetwater County was conducted by the U.S. Geological Survey in cooperation with the Wyoming State Engineers Office. Most of the county has an arid climate. For this reason a large amount of the flow in perennial streams within the county is derived from outside the county. Likewise, much of the ground-water recharge to aquifers within the county is from flows into the county, and occurs slowly. Surface-water data were not collected as part of the study. Evaluations of streamflow and stream-water quality were limited to analyses of historical data and descriptions of previous investigations. Forty-six new ground-water-quality samples were collected as part of the study and the results from an additional 782 historical ground-water-quality samples were reviewed. Available hydrogeologic characteristics for various aquifers throughout the county also are described. Flow characteristics of streams in Sweetwater County vary substantially depending on regional and local basin characteristics and anthropogenic factors. Because precipitation amounts in the county are small, most streams in the county are ephemeral, flowing only as a result of regional or local rainfall or snowmelt runoff. Flows in perennial streams in the county generally are a result of snowmelt runoff in the mountainous headwater areas to the north, west, and south of the county. Flow characteristics of most perennial streams are altered substantially by diversions and regulation. Water-quality characteristics of selected streams in and near Sweetwater County during water years 1974 through 1983 were variable. Concentrations of dissolved constituents, suspended sediment, and bacteria generally were smallest at sites on the Green River because of resistant geologic units, increased vegetative cover, large diluting streamflows, and large reservoirs. Concentrations of dissolved constituents, suspended sediment, and bacteria generally were largest at sites in the Big Sandy River and Bitter Creek Basins. Some nutrient concentrations and bacteria counts exceeded various State and Federal water-quality criteria. Historical and recent anthropogenic activities contributed to natural sources of many dissolved constituents and suspended sediment. Both water-table and artesian conditions occur in aquifers within the county. Shallow ground water is available throughout the county, although much of it is only marginally suitable or is unsuitable for domestic and irrigation uses mainly because of high total dissolved solids (TDS) concentrations. Suitable ground water for livestock use can be found in most areas of the county. Ground-water quality tends to deteriorate with increasing distance from recharge areas and with increasing depth below land surface. Ground water from depths of greater than a few thousand feet tends to have TDS concentrations that make it moderately saline to briny. In some areas even shallow ground water has moderately saline TDS concentrations. Specific constituents in parts of some aquifers in the county occur in relatively high concentrations when compared to U.S. Environmental Protection Agency drinking-water standards. Relatively high concentrations of sulfate, fluoride, boron, iron, and manganese were found in several aquifers. Many ground-water samples from the Battle Spring aquifer in the Great Divide Structural Basin had high radionuclide concentrations. The estimated mean daily water use in Sweetwater County in 2000 was 170.73 million gallons per day. Irrigation was the largest single use of water in the county with an estimated mean use of more than 92 million gallons per day. Surface water irrigation accounted for nearly 90 percent of the total irrigation water used in 2000. Although ground water is used to a much

Ground-water resources and geology of northern and central Johnson County, Wyoming

USGS Publications Warehouse

Whitcomb, Harold A.; Cummings, T. Ray; McCullough, Richard A.

1966-01-01

Northern and central Johnson County, Wyo., is an area of about 2,600 square miles that lies principally in the western part of the Powder River structural basin but also includes the east flank of the Bighorn Mountains. Sedimentary rocks exposed range in age from Cambrian to Recent and have an average total thickness of about 16,000 feet. Igneous and metamorphic rocks of Precambrian age crop out in the Bighorn Mountains. Rocks of pre-Tertiary age, exposed on the flanks and in the foothills of the Bighorns, dip steeply eastward and lie at great depth in the Powder River basin. The rest of the project area is underlain by a thick sequence of interbedded sandstone, siltstone, and shale of Paleocene and Eocene age. Owing to the regional structure, most aquifers in Johnson County contain water under artesian pressure. The Madison Limestone had not been tapped for water in Johnson County at the time of the present investigation (1963), but several wells in eastern Big Horn and Washakie Counties, on the west flank of the Bighorn Mountains, reportedly have flows ranging from 1,100 to 2,800 gallons per minute. Comparable yields can probably be obtained from the Madison in Johnson County in those areas where the limestone is fractured or cavernous. The Tensleep Sandstone reportedly yields 600 gallons per minute to a pumped irrigation well near its outcrop in the southwestern part of the project area. Several flowing wells tap the formation on the west flank of the Bighorn Mountains. The Madison Limestone and the Tensleep Sandstone have limited potential as sources of water because they can be developed economically only in a narrow band paralleling the Bighorn Mountain front in the southwestern part of the project area. Overlying the Tensleep Sandstone is about 6,000 feet of shale, siltstone, and fine-grained sandstone that, with a few exceptions, normally yields only small quantities of water to wells. The Cloverly Formation and the Newcastle Sandstone may yield moderate quantities of water to wells; but, in some areas, properly constructed wells tapping both formations might yield large quantities of water. The Shannon Sandstone Member of the Cody Shale will probably yield only small quantities of water to Wells, but it is the best potential source of ground water in the stratigraphic interval between the Newcastle and Parkman Sandstones. The Parkman Sandstone and the Lance Formation yield water to relatively shallow wells principally in the southwestern part of the project area. The Fort Union Formation yields adequate supplies of water for stock and domestic use from relatively shallow wells near its outcrop almost everywhere in the county. A few deep wells tap the Fort Union along the Powder River valley in the northeastern part of Johnson County. Some of these wells flow, but their flows rarely exceed 10 gallons per minute; larger yields could be undoubtedly be obtained by pumping. The Wasatch Formation is the principal source of ground water in Johnson County. It yields adequate supplies to many relatively shallow stock and domestic wells, some of which flow, but much larger yields probably would require pumping lifts that are prohibitive for most purposes. The Kingsbury Conglomerate and Moncrief Members of the Wasatch Formation, though, may yield moderate quantities of water in some places. Alluvial deposits underlying the valleys of the Powder River and Crazy Woman, Clear, and Piney Creeks are potential sources of moderate to large supplies of water in the Powder River drainage basin. The permeability of these deposits decreases with distance from the Bighorn Mountain front, so that largest yields can probably be obtained along the upper reaches of these streams. Most ground water utilized in the project area is for domestic and stock supplies and is obtained from drilled wells and from springs. Water for irrigation is obtained almost entirely by diverting flows of perennial streams. The discharge of wel

Water-quality conditions during low flow in the lower Youghiogheny River basin, Pennsylvania, October 5-7, 1998

USGS Publications Warehouse

Sams, James I.; Schroeder, Karl T.; Ackman, Terry E.; Crawford, J.K.; Otto, Kim L.

2001-01-01

In October 1998, a chemical synoptic survey was conducted by the U.S. Geological Survey, in cooperation with the U.S. Department of Energy, National Energy Technology Laboratory, in the Lower Youghiogheny River Basin in Pennsylvania to give a snapshot of present (1998) water quality during low-flow conditions. Water samples from 38 sites—12 mainstem sites, 22 tributaries, and 4 mine discharges that discharge directly to the Youghiogheny River—were used to identify sources of contaminants from mining operations. Specific conductance, water temperature, pH, and dissolved oxygen were measured in the field at each site and concentrations of major ions and trace elements were measured in the laboratory.zUnaccounted for gains and losses in streamflow were measured during the study. Unaccounted for losses in streamflow might be attributed to water loss through streambed fractures. Extensive mine tunnels are present in the basin and loss of water to these tunnels seems likely. Unaccounted for gains in streamflow may be from unmeasured tributaries or surface seeps, but most of the gains are suspected to come from artesian flow through fractures in the streambed from underground mine pools. Influent flows of rust-colored water were noted in some river sections.The pH values for all the samples collected during this survey were above 5.8, and most (33 of 38 samples) were above 7.0. Samples from the four mine-discharge sites also had pH values between 6.3 and 6.7. The lowest pH (5.8) was in a tributary, Galley Run. All 38 sampling sites had net alkalinity.The alkalinity load in the Youghiogheny River increased between Connellsville and McKeesport from 35 to 79 tons per day. Above Smithton, the measured alkalinity load in the Lower Youghiogheny River agreed well with the estimated alkalinity load. Below Smithton, measured alkalinity loads in the Lower Youghiogheny River are greater than calculated loads, resulting in unaccounted for gains in alkalinity. These gains are believed to be from seeps in the streambed. Approximately one-third of the load of total alkalinity in the Youghiogheny River at McKeesport is attributed to Sewickley Creek, which contributes 14 tons per day.Sulfate concentrations in the Youghiogheny River steadily increase from 33 milligrams per liter at Connellsville to 77 milligrams per liter near McKeesport. The measured concentrations of sulfate exceeded Pennsylvania water-quality standards at four tributary sites (Galley Run, Hickman Run, Sewickley Creek, and Gillespie Run) and all four mine-discharge sites but not at any main-stem sites. A large increase in sulfate load between West Newton and Sutersville can be attributed almost entirely to the contribution from Sewickley Creek (49 tons per day). Approximately 25 percent of the load measured between Connellsville and McKeesport is unaccounted for. These gains are believed to be from seeps in the streambed from underground mine pools.Similar patterns also were observed for loads of sodium, calcium, and magnesium. Unmeasured inputs from mine drainage are believed to be the source of these loads. Elevated concentrations (above background levels) of chemicals associated with drainage from coal-mining operations were measured in samples from tributaries, especially from Galley Run, Gillespie Run, and Sewickley Creek, and from the mine-discharge sites. The synoptic survey conducted for this study was successful in identifying generalized reaches of the Youghiogheny River where unaccounted for loads of constituents associated with mining activities are entering the river. However, the survey was not able to pinpoint the location of these loads. Remote-sensing techniques, such as thermal infrared imaging by the National Energy Technology Laboratory, could be useful for determining the precise locations of these inputs.

Ground-water investigations of the Project Gnome area, Eddy and Lea Counties, New Mexico

USGS Publications Warehouse

Cooper, J.B.

1962-01-01

The U.S. Atomic Energy Commission, through the Office of Test Operations, Albuquerque Operations Office, plans to detonate a nuclear device in a massive salt bed 1,200 feet beneath the land surface. The project, known as Project Gnome, is an element of the Plowshare program--a study of peacetime applications of nuclear fission. The location of the proposed underground shot is in a sparsely-populated area in southeastern Eddy County, N. Mex., east of the Pecos River and about 25 miles southeast of the city of Carlsbad. The area is arid to Semiarid and ground water is a vital factor in the economic utilization of the land, which is primarily used for stock raising. An investigation of the Project Gnome site and surrounding area for the purposes of evaluating the ground-water resources and the possible effect upon them from the detonation of the nuclear shot was desired by the Commission. This report describes work done by the U.S. Geological Survey on behalf of the Commission and presents results of the investigation of the ground-water resources and geology of the area. The most intensive investigations were made within a 15-mile radius of the site of Project Gnome and mainly on the east side of the Pecos River. The total area of study of over 1,200 square miles includes parts of Eddy and Lea Counties, N. Mex. The Project Gnome site is in the sedimentary Delaware Basin. It is underlain by about 18,000 feet of sedimentary rocks ranging in age from Ordovician to Recent. Upper Permian evaporitic rocks, which contain the principal source of potash available in the United States, are worked in nearby mines. The potash minerals are found in a massive salt bed about 1,400 feet thick in the Salado Formation of Permian age. The land surface of the area is covered mostly by a wind-blown sand and caliche; however, rocks of the Rustler Formation of Permian age and younger rocks of Permian, Triassic, Pleistocene(?) and Recent age crop out at several localities. Solution by ground water of salt at the top of the Salado Formation and of anhydrite within the Rustler Formation has removed thick sections of these rocks. A subsequent lowering of the land surface and differential collapse of the Rustler has formed many sinkholes and has created a karst topography over much of the western part of the area. Ground water is obtained from rocks of Permian, Triassic, Tertiary, and Quaternary age in the general region. However, the only aquifer at the Gnome site is the Culebra Dolomite Member of the Rustler Formation of Permian age. The aquifer is about 500 feet beneath the surface at the site and is about 30 feet thick. An aquifer, immediately above the top of the salt, contains a brine solution in Nash Draw, a few miles west of the Gnome site. This aquifer discharges into the Pecos River and is a major source of contamination of the river water. No potable water is known to be present in the area below the top of the salt of the Salado Formation. The ground water in the area is generally under artesian pressure. The general direction of ground-water movement is toward the Pecos River both east and west of the river. At the Gnome site the artesian head of the water in the Culebra Dolomite Member is about 7.5 feet. The water moves westward through the aquifer at a rate of about ? foot per day. The most widespread utilization of ground water east of the river is for stock use. Irrigation usage west of the Pecos River accounts for the largest withdrawal of water. Wells range in depth from a few tens of feet to nearly 800 feet. Water levels range from a few feet to about 500 feet below the surface. A test well at the Gnome site drawing water from the Culebra Dolomite Member was pumped at a rate of 100 gpm (gallons per minute); however, most wells east of the river yield only a few gpm. Irrigation wells west of the river yield as much as 3,500 gpm. Most of the water in the area is highly mineralized and is suitable only for use by livest

Hydrogen-enriched water restoration of impaired calcium propagation by arsenic in primary keratinocytes

NASA Astrophysics Data System (ADS)

Yu, Wei-Tai; Chiu, Yi-Ching; Lee, Chih-Hung; Yoshioka, Tohru; Yu, Hsin-Su

2013-11-01

Endemic contamination of artesian water for drinking by arsenic is known to cause several human cancers, including cancers of the skin, bladder, and lungs. In skin, multiple arsenic-induced Bowen's disease (As-BD) can develop into invasive cancers after decades of arsenic exposure. The characteristic histological features of As-BD include full-layer epidermal dysplasia, apoptosis, and abnormal proliferation. Calcium propagation is an essential cellular event contributing to keratinocyte differentiation, proliferation, and apoptosis, all of which occur in As-BD. This study investigated how arsenic interferes calcium propagation of skin keratinocytes through ROS production and whether hydrogen-enriched water would restore arsenic-impaired calcium propagation. Arsenic was found to induce oxidative stress and inhibit ATP- and thapsigaragin-induced calcium propagation. Pretreatment of arsenic-treated keratinocytes by hydrogen-enriched water or beta-mercaptoethanol with potent anti-oxidative effects partially restored the propagation of calcium by ATP and by thapsigaragin. It was concluded that arsenic may impair calcium propagation, likely through oxidative stress and interactions with thiol groups in membrane proteins.

May 2011 Groundwater and Surface Water Sampling at the Rio Blanco, Colorado, Site (Data Validation Package)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hutton, Rick

2011-12-01

Annual sampling was conducted at the Rio Blanco, Colorado, site for the Long-Term Hydrologic Monitoring Program May 16-17, 2011, to monitor groundwater and surface water for potential radionuclide contamination. Sampling and analyses were conducted as specified in Sampling and Analysis Plan for the U.S. Department of Energy Office of Legacy Management Sites (LMS/PRO/S04351, continually updated). A duplicate sample was collected from location Johnson Artesian WL. Samples were analyzed by the U.S. Environmental Protection Agency (EPA) Radiation&Indoor Environments National Laboratory in Las Vegas, Nevada. Samples were analyzed for gamma-emitting radionuclides by high-resolution gamma spectrometry, and for tritium using the conventional method.more » Tritium was not measured using the enrichment method because the EPA laboratory no longer offers that service. Results of this monitoring at the Rio Blanco site demonstrate that groundwater and surface water outside the boundaries have not been affected by project-related contaminants.« less

Generalized potentiometric surface of aquifers of Pleistocene age, Southern Louisiana, 1980

USGS Publications Warehouse

Martin, Angel; Whiteman, Charles D.

1985-01-01

A map of potentiometric surface defines generalized water levels for 1980 in the Pleistocene aquifers of southern Louisiana. The map was prepared as part of the Western Gulf Coast Regional Aquifer-System Analysis study. The Pleistocene deposits in southern Louisiana consist of alternating beds of sand, gravel, silt, and clay deposited under fluvial, deltaic, and near-short marine conditions. The aquifers are mainly under artesian conditions and the regional flow direction is primarily southward. Areally definable cones of depression result from heavy pumpage in the Baton Rouge, Lake Charles, and New Orleans metropolitan areas and in the rice irrigation area of southwestern Louisiana. Where water levels differ vertically within the aquifer, the lowest water levels in the vertical section were used because these levels represented the thickest and most heavily pumped unit in the aquifer. The map represents regional water levels in the Pleistocene aquifers, and is not intended to show localized variations near pumping centers. (USGS)

Integrating CO₂ storage with geothermal resources for dispatchable renewable electricity

DOE PAGES

Buscheck, Thomas A.; Bielicki, Jeffrey M.; Chen, Mingjie; ...

2014-12-31

We present an approach that uses the huge fluid and thermal storage capacity of the subsurface, together with geologic CO₂ storage, to harvest, store, and dispatch energy from subsurface (geothermal) and surface (solar, nuclear, fossil) thermal resources, as well as energy from electrical grids. Captured CO₂ is injected into saline aquifers to store pressure, generate artesian flow of brine, and provide an additional working fluid for efficient heat extraction and power conversion. Concentric rings of injection and production wells are used to create a hydraulic divide to store pressure, CO₂, and thermal energy. Such storage can take excess power frommore » the grid and excess/waste thermal energy, and dispatch that energy when it is demanded, enabling increased penetration of variable renewables. Stored CO₂ functions as a cushion gas to provide enormous pressure-storage capacity and displaces large quantities of brine, which can be desalinated and/or treated for a variety of beneficial uses.« less

Natural fluoride levels in some springs and streams from the late Maastrichtian Ajali formation in Ohafia-Arochukwu area of south eastern Nigeria.

PubMed

Ibe, K K; Adlegbembo, A O; Mafeni, J O; Danfillo, I S

1999-09-01

The aim of this study was to provide baseline data on the fluoride levels in waters associated with the late Maastrichtian Ajali formation in Ohafia-Arochukwu area of South Eastern Nigeria. Water samples from 14 artesian, perched springs and eight streams from the formation were collected with plastic containers. Fluoride analysis was carried out with inductively coupled plasma Atomic Emission Spectrometry (ICP-AES) equipment at the laboratories of the Department of Earth Science, University of Leeds, United Kingdom. The results showed that fluoride occurred in only one of the 14 spring water samples. Fluoride level in the sample was 0.03 ppm. The spring water, which contained some fluoride, was possibly associated with another rock formation: namely, the limestone bearing Nsukka formation, which overlies the Ajali formation. No fluoride was observed in all the stream water samples. This study reported the absence of fluoride in spring and stream waters associated with the late Maastrichtian formations in Nigeria.

The history and fate of the Nubian Sandstone Aquifer springs in the oasis depressions of the Western Desert, Egypt

NASA Astrophysics Data System (ADS)

Powell, Owen; Fensham, Rod

2016-03-01

Extraction of groundwater for agriculture has resulted in the loss of springs across arid regions of the globe. The history and fate are recorded of the artesian springs of Egypt's Western Desert, from ancient times to the present, spanning the rise and fall of the great civilisations from the Pharoanic dynasties to Persian, Greek and Roman conquests. The study area includes oases Kharga, Dakhla, Bahriya, Farafra and Siwa, and several outer and small oases around Siwa and the edge of the Qattara Depression. The region is hyper-arid, receiving 10 mm or less average annual precipitation and evaporation rates are in the vicinity of 3,000 mm/a. Groundwater in the oases is largely derived from bores discharging from the Nubian Sandstone Aquifer. Based on an extensive survey, conducted for the first time, attention is drawn to the rapid demise of springs as a result of modern irrigation schemes which continue to deplete groundwater supplies.

Continuous seismic-reflection survey defining shallow sedimentary layers in the Charlotte Harbor and Venice areas, southwest Florida

USGS Publications Warehouse

Wolansky, R.M.; Haeni, F.P.; Sylvester, R.E.

1983-01-01

A continuous marine seismic-reflection survey system was used to define the configuration of shallow sedimentary layers underlying the Charlotte Harbor and Venice areas, southwest Florida. Seismic profiling was conducted over a distance of about 57 miles of Charlotte Harbor, the Peace and Myakka Rivers, and the Intracoastal Waterway near Venice using a high resolution energy source capable of penetrating 200 feet of sediments with a resolution of 1 to 3 feet. Five stratigraphic units defined from the seismic records includes sediments to Holocene to early Miocene age. All seismic-profile records are presented, along with geologic sections constructed from the records. Seismic reflection amplitude, frequency, continuity, configuration, external form, and areal association were utilized to interpret facies and depositional environments of the stratigraphic units. The despositional framework of the units ranges from shallow shelf to prograded slope. The stratigraphic units are correlated with the surficial aquifer and intermediate artesian aquifers, and permeable zones of the aquifers are related to the seismic records. (USGS)

Recurrent ESR1-CCDC170 rearrangements in an aggressive subset of estrogen-receptor positive breast cancers

PubMed Central

Veeraraghavan, Jamunarani; Tan, Ying; Cao, Xi-Xi; Kim, Jin-Ah; Wang, Xian; Chamness, Gary C.; Maiti, Sourindra N.; Cooper, Laurence J. N.; Edwards, Dean P.; Contreras, Alejandro; Hilsenbeck, Susan G.; Chang, Eric C.; Schiff, Rachel; Wang, Xiao-Song

2014-01-01

Characterizing the genetic alterations leading to the more aggressive forms of estrogen receptor positive (ER+) breast cancers are of critical significance in breast cancer management. Here we identify recurrent rearrangements between estrogen receptor gene ESR1 and its neighbor CCDC170, which are enriched in the more aggressive and endocrine-resistant luminal-B tumors, through large-scale analyses of breast cancer transcriptome and copy number alterations. Further screening of 200 ER+ breast cancers identifies eight ESR1-CCDC170 positive tumors. These fusions encode N-terminally truncated CCDC170 proteins (ΔCCDC170). When introduced into ER+ breast cancer cells, ΔCCDC170 leads to markedly increased cell motility and anchorage-independent growth, reduced endocrine sensitivity, and enhanced xenograft tumor formation. Mechanistic studies suggest that ΔCCDC170 engages Gab1 signalosome to potentiate growth factor signaling and enhance cell motility. Together, this study identifies neoplastic ESR1-CCDC170 fusions in a more aggressive subset of ER+ breast cancer, which suggests a new concept of ER pathobiology in breast cancer. PMID:25099679

Hygroscopic Swelling Determination of Cellulose Nanocrystal (CNC) Films by Polarized Light Microscopy Digital Image Correlation.

PubMed

Shrestha, Shikha; Diaz, Jairo A; Ghanbari, Siavash; Youngblood, Jeffrey P

2017-05-08

The coefficient of hygroscopic swelling (CHS) of self-organized and shear-oriented cellulose nanocrystal (CNC) films was determined by capturing hygroscopic strains produced as result of isothermal water vapor intake in equilibrium. Contrast enhanced microscopy digital image correlation enabled the characterization of dimensional changes induced by the hygroscopic swelling of the films. The distinct microstructure and birefringence of CNC films served in exploring the in-plane hygroscopic swelling at relative humidity values ranging from 0% to 97%. Water vapor intake in CNC films was measured using dynamic vapor sorption (DVS) at constant temperature. The obtained experimental moisture sorption and kinetic profiles were analyzed by fitting with Guggenheim, Anderson, and deBoer (GAB) and Parallel Exponential Kinetics (PEK) models, respectively. Self-organized CNC films showed isotropic swelling, CHS ∼0.040 %strain/%C. By contrast, shear-oriented CNC films exhibited an anisotropic swelling, resulting in CHS ∼0.02 and ∼0.30 %strain/%C, parallel and perpendicular to CNC alignment, respectively. Finite element analysis (FEA) further predicted moisture diffusion as the predominant mechanism for swelling of CNC films.

Assessment of sediment quality in the Mediterranean Sea-Boughrara lagoon exchange areas (southeastern Tunisia): GIS approach-based chemometric methods.

PubMed

Kharroubi, Adel; Gargouri, Dorra; Baati, Houda; Azri, Chafai

2012-06-01

Concentrations of selected heavy metals (Cd, Pb, Zn, Cu, Mn, and Fe) in surface sediments from 66 sites in both northern and eastern Mediterranean Sea-Boughrara lagoon exchange areas (southeastern Tunisia) were studied in order to understand current metal contamination due to the urbanization and economic development of nearby several coastal regions of the Gulf of Gabès. Multiple approaches were applied for the sediment quality assessment. These approaches were based on GIS coupled with chemometric methods (enrichment factors, geoaccumulation index, principal component analysis, and cluster analysis). Enrichment factors and principal component analysis revealed two distinct groups of metals. The first group corresponded to Fe and Mn derived from natural sources, and the second group contained Cd, Pb, Zn, and Cu originated from man-made sources. For these latter metals, cluster analysis showed two distinct distributions in the selected areas. They were attributed to temporal and spatial variations of contaminant sources input. The geoaccumulation index (I (geo)) values explained that only Cd, Pb, and Cu can be considered as moderate to extreme pollutants in the studied sediments.

Obscenity Detection Using Haar-Like Features and Gentle Adaboost Classifier

PubMed Central

Min, Yang; Zhu, Dingju

2014-01-01

Large exposure of skin area of an image is considered obscene. This only fact may lead to many false images having skin-like objects and may not detect those images which have partially exposed skin area but have exposed erotogenic human body parts. This paper presents a novel method for detecting nipples from pornographic image contents. Nipple is considered as an erotogenic organ to identify pornographic contents from images. In this research Gentle Adaboost (GAB) haar-cascade classifier and haar-like features used for ensuring detection accuracy. Skin filter prior to detection made the system more robust. The experiment showed that, considering accuracy, haar-cascade classifier performs well, but in order to satisfy detection time, train-cascade classifier is suitable. To validate the results, we used 1198 positive samples containing nipple objects and 1995 negative images. The detection rates for haar-cascade and train-cascade classifiers are 0.9875 and 0.8429, respectively. The detection time for haar-cascade is 0.162 seconds and is 0.127 seconds for train-cascade classifier. PMID:25003153

Alternate charging profiles for the onboard nickel cadmium batteries of the Explorer Platform/Extreme Ultraviolet Explorer

NASA Technical Reports Server (NTRS)

Rao, Gopalakrishna M.; Prettyman-Lukoschek, Jill S.

1995-01-01

The Explorer Platform/Extreme Ultraviolet Explorer (EP/EUVE) spacecraft power is provided by the Modular Power Subsystems (MPS) which contains three 50 ampere-hour Nickel Cadmium (NiCd) batteries. The batteries were fabricated by McDonnell Douglas Electronics Systems Company, with the cells fabricated by Gates Aerospace Batteries (GAB), Gainesville, Florida. Shortly following launch, the battery performance characteristics showed similar signatures as the anomalous performance observed on both the Upper Atmosphere Research Satellite (UARS) and the Compton Gamma Ray Observatory (CGRO). This prompted the development and implementation of alternate charging profiles to optimize the spacecraft battery performance. The Flight Operations Team (FOT), under the direction of Goddard Space Flight Center's (GSFC) EP/EUVE Project and Space Power Applications Branch have monitored and managed battery performance through control of the battery Charge to Discharge (C/D) ratio and implementation of a Solar Array (SA) offset. This paper provides a brief overview of the EP/EUVE mission, the MPS, the FOT's battery management for achieving the alternate charging profile, and the observed spacecraft battery performance.

Hydrocarbons in surface sediments from the Sfax coastal zone, (Tunisia) Mediterranean Sea.

PubMed

Zaghden, Hatem; Kallel, Monem; Louati, Afifa; Elleuch, Boubaker; Oudot, Jean; Saliot, Alain

2005-11-01

The Semi-enclosed Mediterranean Sea records various signals of high anthropic pressures from surrounding countries and the industrialized European countries. This is particularly true for oil pollution. Although accounting for 1% of the world's ocean surface, it receives about 25% of the petroleum inputs to the ocean. To achieve a global budget we need to collect information from different parts of the Mediterranean. Particularly, we focus in this paper on the Southern Mediterranean, where data are presently very scarce. In this context, the University of Sfax has undertaken an estimation of hydrocarbon pollution along the coasts of Sfax and Gabès Gulf. Non-aromatic hydrocarbons were analysed in 8 surface sediments by FT/IR and GC/MS. Non-aromatic hydrocarbon concentrations vary in the range 310-1406 microg g(-1) sediments dry weight, which is high, compared to other Mediterranean sites. GC/MS data indicate a large group of unresolved compounds suggesting a petroleum contamination, confirmed by the identification of hopanes with predominant C29 and C30alpha,beta compounds and steranes with predominance of C27 over C28) and C29 compounds.

Origin and distribution of hydrocarbons and organic matter in the surficial sediments of the Sfax-Kerkennah channel (Tunisia, Southern Mediterranean Sea).

PubMed

Zaghden, Hatem; Tedetti, Marc; Sayadi, Sami; Serbaji, Mohamed Moncef; Elleuch, Boubaker; Saliot, Alain

2017-04-15

We investigated the origin and distribution of aliphatic and polycyclic aromatic hydrocarbons (AHs and PAHs) and organic matter (OM) in surficial sediments of the Sfax-Kerkennah channel in the Gulf of Gabès (Tunisia, Southern Mediterranean Sea). TOC, AH and PAH concentrations ranged 2.3-11.7%, 8-174μgg -1 sed.dw and 175-10,769ngg -1 sed.dw, respectively. The lowest concentrations were recorded in the channel (medium sand sediment) and the highest ones in the Sfax harbor (very fine sand sediment). AHs, PAHs and TOC were not correlated for most of the stations. TOC/N and δ 13 C values revealed a mixed origin of OM with both marine and terrestrial sources. Hydrocarbon molecular composition highlighted the dominance of petrogenic AHs and the presence of both petrogenic and pyrogenic PAHs, associated with petroleum products and combustion processes. This work underscores the complex distribution patterns and the multiple sources of OM and hydrocarbons in this highly anthropogenized coastal environment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Moisture sorption isotherms and glass transition temperature of elecampe (Inula helenium L.) and burdock (Arctium lappa L.) roots at 25°C.

PubMed

Cervenka, L; Kubínová, J; Juszczak, L; Witczak, M

2012-02-01

Sorption isotherms of elecampe (Inula helenium L.) and burdock (Arctium lappa L.) root samples were obtained at 25 °C. Elecampe exhibited hysteresis loop in the range of 0.35-0.90 a(w) , whereas burdock roots showed significant differences between adsorption and desorption isotherms from 0.65 to 0.80 a(w) . Blahovec-Yanniotis was considered to give the best fit over the whole range of a(w) tested. Various parameters describing the properties of sorbed water derived from GAB, Henderson and Blahovec-Yanniotis models have been discussed. Differential scanning calorimetric method was used to measure the glass transition temperature (T (g)) of root samples in relation to water activity. The safe moisture content was determined in 12.01 and 14.96 g/100 g d. b. for burdock and elecampe root samples at 25 °C, respectively. Combining the T (g) line with sorption isotherm in one plot, it was found that the glass transition temperature concept overestimated the temperature stability for both root samples.

Induced recharge of an artesian glacial-drift aquifer at Kalamazoo, Michigan

USGS Publications Warehouse

Reed, J.E.; Deutsch, Morris; Wiitala, S.W.

1966-01-01

As part of a program for managing its ground-water supply, the city of Kalamazoo has constructed induced-recharge facilities at the sites of several of its well fields. To determine the benefits of induced recharge in a water-management program, the U.S. Geological Survey, in cooperation with the city, conducted a series of field experiments at a city well field (Station 9). The 12 production wells at the test site penetrate about 160 feet of glacial drift, which can be separated into three general units a lower aquifer, an intervening confining layer, and an upper aquifer. Although the upper aquifer is not tapped by any of the municipal supply wells, it serves as a storage and transmission medium for water from the West Fork Portage Creek. The testing program consisted of four aquifer and three recharge tests. The aquifer tests show that the transmissibility of the upper and lower aquifers ranges from 50,000 to 100,000 gallons per day per foot and indicate that nearly 200 gpm (gallons per minute) leaks through the intervening aquiclude under nonpumping conditions. The object of the three recharge tests (tests 5, 6, and 7) was to observe the effects of induced recharge by varying conditions in the recharge channel. During the three recharge tests, 7 wells were pumped at a total rate averaging about 2,500 gpm. During test 5, inflow to the channel was shut off, and the water level in the channel was allowed to decline. Drawdowns measured during this test were used as a standard for comparison with drawdowns in tests 6 and 7. During test 6, the head in the recharge channel was maintained as constant as possible, and the inflow to the channel was measured. The rate of induced recharge, as indicated by the measured inflow, averaged about 300 gpm. Between tests 6 and 7, the area of the channel was increased from 27,000 to 143,000 square feet. During test 7, the head in the channel was again maintained as constant as possible, but the inflow to the larger channel increased to about 600 gpm. The principal effect of induced recharge on the two aquifers was to reduce the amount and rate of drawdown. Therefore, where water levels and artesian pressures can be maintained at high stages, the result is lower pumping costs and increased rates of withdrawal during periods of peak demand.

Growth and development of spring towers at Shiqiang, Yunnan Province, China

NASA Astrophysics Data System (ADS)

Jones, Brian; Peng, Xiaotong

2017-01-01

Throughout the world, high artesian pressures in hydrothermal areas have led to the growth of tall spring towers that have their vents at their summits. The factors that control their development and formative precipitates are poorly understood because these springs, irrespective of location, are mostly inactive. Spring towers found at Shiqiang (Yunnan Province, China), which are up to 4 m high and 3 m in diameter, are formed largely of calcite and aragonite crystal bushes, euhedral calcite crystals and coated grains with alternating Fe-poor and Fe-rich zones, calcite rafts, and cements formed of various combinations of calcite, aragonite, strontianite, Mg-Si reticulate, needle fiber calcite, calcified and non-calcified microbes, diatoms, and insects. Collectively, the limestones that form the towers can be divided into (1) Group A that are friable, porous and form the cores of the towers and have δ18OSMOW values of + 15.7 to + 19.7‰ (average 17.8‰) and δ13CPDB values of + 5.1 to + 6.9‰ (average 5.9‰), and (2) Group B that are hard and well lithified and found largely around the vents and the tower sides, and have δ18OSMOW values of + 13.0 to + 22.0‰ (average 17.6‰) and δ13CPDB values of + 1.4 to + 3.6‰ (average 2.6‰). The precipitates and the isotopic values indicate that these were thermogene springs. Growth of the Shiqiang spring towers involved (1) Phase IA when precipitation of calcite and aragonite bushes formed the core of the tower and Phase IB when calcite, commonly Fe-rich, was precipitated locally, (2) Phase II that involved the precipitation of white cements, formed of calcite, aragonite, strontianite, and Mg-Si reticulate coatings in cavities amid the Phase I precipitates, and (3) Phase III, which formed probably after spring activity ceased, when needle-fiber calcite was precipitated and the mounds were invaded by microbes (some now calcified), diatoms, and insects. At various times during this complex history, pore waters mediated dissolution of the calcite and aragonite and sometimes partial alteration of the aragonite. The diverse array of precipitates, depositional fabrics and diagenetic changes clearly indicate that the composition of the spring water changed frequently. Growth of the spring towers at Shiqiang continued until there was insufficient artesian pressure to lift the water above the top of the tower vent.

Models of Formation and Activity of Spring Mounds in the Mechertate-Chrita-Sidi El Hani System, Eastern Tunisia: Implications for the Habitability of Mars

PubMed Central

Essefi, Elhoucine; Komatsu, Goro; Fairén, Alberto G.; Chan, Marjorie A.; Yaich, Chokri

2014-01-01

Spring mounds on Earth and on Mars could represent optimal niches of life development. If life ever occurred on Mars, ancient spring deposits would be excellent localities to search for morphological or chemical remnants of an ancient biosphere. In this work, we investigate models of formation and activity of well-exposed spring mounds in the Mechertate-Chrita-Sidi El Hani (MCSH) system, eastern Tunisia. We then use these models to explore possible spring mound formation on Mars. In the MCSH system, the genesis of the spring mounds is a direct consequence of groundwater upwelling, triggered by tectonics and/or hydraulics. As they are oriented preferentially along faults, they can be considered as fault spring mounds, implying a tectonic influence in their formation process. However, the hydraulic pressure generated by the convergence of aquifers towards the surface of the system also allows consideration of an origin as artesian spring mounds. In the case of the MCSH system, our geologic data presented here show that both models are valid, and we propose a combined hydro-tectonic model as the likely formation mechanism of artesian-fault spring mounds. During their evolution from the embryonic (early) to the islet (“island”) stages, spring mounds are also shaped by eolian accumulations and induration processes. Similarly, spring mounds have been suggested to be relatively common in certain provinces on the Martian surface, but their mode of formation is still a matter of debate. We propose that the tectonic, hydraulic, and combined hydro-tectonic models describing the spring mounds at MCSH could be relevant as Martian analogs because: (i) the Martian subsurface may be over pressured, potentially expelling mineral-enriched waters as spring mounds on the surface; (ii) the Martian subsurface may be fractured, causing alignment of the spring mounds in preferential orientations; and (iii) indurated eolian sedimentation and erosional remnants are common features on Mars. The spring mounds further bear diagnostic mineralogic and magnetic properties, in comparison with their immediate surroundings. Consequently, remote sensing techniques can be very useful to identify similar spring mounds on Mars. The mechanisms (tectonic and/or hydraulic) of formation and evolution of spring mounds at the MCSH system are suitable for the proliferation and protection of life respectively. Similarly, life or its resulting biomarkers on Mars may have been protected or preserved under the spring mounds. PMID:25370379

Models of formation and activity of spring mounds in the mechertate-chrita-sidi el hani system, eastern Tunisia: implications for the habitability of Mars.

PubMed

Essefi, Elhoucine; Komatsu, Goro; Fairén, Alberto G; Chan, Marjorie A; Yaich, Chokri

2014-08-28

Spring mounds on Earth and on Mars could represent optimal niches of life development. If life ever occurred on Mars, ancient spring deposits would be excellent localities to search for morphological or chemical remnants of an ancient biosphere. In this work, we investigate models of formation and activity of well-exposed spring mounds in the Mechertate-Chrita-Sidi El Hani (MCSH) system, eastern Tunisia. We then use these models to explore possible spring mound formation on Mars. In the MCSH system, the genesis of the spring mounds is a direct consequence of groundwater upwelling, triggered by tectonics and/or hydraulics. As they are oriented preferentially along faults, they can be considered as fault spring mounds, implying a tectonic influence in their formation process. However, the hydraulic pressure generated by the convergence of aquifers towards the surface of the system also allows consideration of an origin as artesian spring mounds. In the case of the MCSH system, our geologic data presented here show that both models are valid, and we propose a combined hydro-tectonic model as the likely formation mechanism of artesian-fault spring mounds. During their evolution from the embryonic (early) to the islet ("island") stages, spring mounds are also shaped by eolian accumulations and induration processes. Similarly, spring mounds have been suggested to be relatively common in certain provinces on the Martian surface, but their mode of formation is still a matter of debate. We propose that the tectonic, hydraulic, and combined hydro-tectonic models describing the spring mounds at MCSH could be relevant as Martian analogs because: (i) the Martian subsurface may be over pressured, potentially expelling mineral-enriched waters as spring mounds on the surface; (ii) the Martian subsurface may be fractured, causing alignment of the spring mounds in preferential orientations; and (iii) indurated eolian sedimentation and erosional remnants are common features on Mars. The spring mounds further bear diagnostic mineralogic and magnetic properties, in comparison with their immediate surroundings. Consequently, remote sensing techniques can be very useful to identify similar spring mounds on Mars. The mechanisms (tectonic and/or hydraulic) of formation and evolution of spring mounds at the MCSH system are suitable for the proliferation and protection of life respectively. Similarly, life or its resulting biomarkers on Mars may have been protected or preserved under the spring mounds.

Altitude of the Top of the Madison Limestone in the Black Hills area, South Dakota, 1999

USGS Publications Warehouse

Carter, Janet M.; Redden, Jack A.

2000-01-01

This map is a product of the Black Hills Hydrology Study, which was initiated in 1990 to assess the quantity, quality, and distribution of surface water and groundwater in the Black Hills area of South Dakota (Driscoll, 1992). This long-term study is a cooperative effort between the U.S. Geological Survey (USGS), the South Dakota Department of Environment and Natural Resources, and the West Dakota Water Development District, which represents various local and county cooperators. This map is part of a series of 1:100,000-scale maps for the study. The maps include a hydrogeologic map, structure-contour maps (altitudes of the tops of formations) for five formations that contain major aquifers in the study area, and potentiometric maps for these five major aquifers (the Inyan Kara, Minnekahta, Minnelusa, Madison, and Deadwood aquifers).The study area consists of the topographically defined Black Hills and adjacent areas located in western South Dakota. The Black Hills area is an elongated, dome-shaped feature, about 125 miles long and 60 miles wide, which was uplifted during the Laramide orogeny (Feldman and Heimlich, 1980). The oldest geologic units in the study arca arc Precambrian metamorphic and igneous rocks, which are exposed in the central core of the Black Hills. Surrounding the Precambrian core is a layered series of sedimentary rocks including limestones, sandstones, and shales that are exposed in roughly concentric rings around the uplifted flanks of the Black Hills. The bedrock sedimentary units typically dip away from the uplifted Black Hills at angles that approach or exceed 10 degrees near the outcrops, and decrease with distance from the uplift. Many of the sedimentary units contain aquifers, both within and beyond the study area. Recharge to these aquifers occurs from infiltration of precipitation upon the outcrops and, in some cases, from infiltration of streamflow (Hortness and Driscoll, 1998). Artesian conditions generally exist within these aquifers where an upper confining layer is present. Flowing wells and artesian springs that originate from confined aquifers are common around the periphery of the Black Hills.The purpose of this map is to show the altitude of the top (structure contours) of the Madison Limestone within the area of the Black Hills Hydrology Study. The depth to the top of the Madison Limestone can be estimated at a specific site by subtracting the altitude of the top of the formation from the topographic elevation. However, caution is urged in determining the depth to the top of the formation in areas on the map where the contours are approximately located.

Altitude of the Top of the Deadwood Formation in the Black Hills area, South Dakota, 1999

USGS Publications Warehouse

Carter, Janet M.; Redden, Jack A.

2000-01-01

This map is a product of the Black Hills Hydrology Study, which was initiated in 1990 to assess the quantity, quality, and distribution of surface water and ground water in the Black Hills area of South Dakota (Driscoll, 1992). This long-term study is a cooperative effort between the U.S. Geological Survey (USGS), the South Dakota Department of Environment and Natural Resources, and the West Dakota Water Development District, which represents various local and county cooperators. This map is part of a series of 1:100,000-scale maps for the study. The maps include a hydrogeologic map, structure-contour maps (altitudes of the tops of formations) for five formations that contain major aquifers in the study area, and potentiometric maps for these five major aquifers (the Inyan Kara, Minnekahta, Minnelusa, Madison, and Deadwood aquifers).The study area consists of the topographically defined Black Hills and adjacent areas located in western South Dakota. The Black Hills area is an elongated, dome-shaped feature, about 125 miles long and 60 miles wide, which was uplifted during the Laramide orogeny (Feldman and Heimlich, 1980). The oldest geologic units in the study area are Precambrian metamorphic and igneous rocks, which are exposed in the central core of the Black Hills. Surrounding the Precambrian core is a layered series of sedimentary rocks including limestones, sandstones, and shales that are exposed in roughly concentric rings around the uplifted flanks of the Black Hills. The bedrock sedimentary units typically dip away from the uplifted Black Hills at angles that approach or exceed 10 degrees near the outcrops, and decrease with distance from the uplift. Many of the sedimentary units contain aquifers, both within and beyond the study area. Recharge to these aquifers occurs from infiltration of precipitation upon the outcrops and, in some cases, from infiltration of streamflow (Hortness and Driscoll, 1998). Artesian conditions generally exist within these aquifers where an upper confining layer is present. Flowing wells and artesian springs that originate from confined aquifers are common around the periphery of the Black Hills.The purpose of this map is to show the altitude of the top (structure contours) of the Deadwood Formation within the area of the Black Hills Hydrology Study. The depth to the top of the Deadwood Formation can be estimated at a specific site by subtracting the altitude of the top of the formation from the topographic elevation, However, caution is urged in determining the depth to the top of the formation in areas on the map where the contours are approximately located.

Altitude of the Top of the Minnelusa Formation in the Black Hills area, South Dakota, 1999

USGS Publications Warehouse

Carter, Janet M.; Redden, Jack A.

2000-01-01

This map is a product of the Black Hills Hydrology Study, which was initiated in 1990 to assess the quantity, quality, and distribution of surface water and ground water in the Black Hills area of South Dakota (Driscoll, 1992). This long-term study is a cooperative effort between the U.S. Geological Survey (USGS), the South Dakota Department of Environment and Natural Resources, and the West Dakota Water Development District, which represents various local and county cooperators. This map is part of a series of 1:100,000-scale maps for the study. The maps include a hydrogeologic map, structure-contour maps (altitudes of the tops of formations) for five formations that contain major aquifers in the study area, and potentiometric maps for these five major aquifers (the Inyan Kara, Minnekahta, Minnelusa, Madison, and Deadwood aquifers).The study area consists of the topographically defined Black Hills and adjacent areas located in western South Dakota. The Black Hills area is an elongated, dome-shaped feature, about 125 miles long and 60 miles wide, which was uplifted during the Laramide orogeny (Feldman and Heimlich, 1980). The oldest geologic units in the study area are Precambrian metamorphic and igneous rocks, which are exposed in the central core of the Black Hills. Surrounding the Precambrian core is a layered series of sedimentary rocks including limestones, sandstones, and shales that are exposed in roughly concentric rings around the uplifted flanks of the Black Hills. The bedrock sedimentary units typically dip away from the uplifted Black Hills at angles that approach or exceed 10 degrees near the outcrops, and decrease with distance from the uplift. Many of the sedimentary units contain aquifers, both within and beyond the study area. Recharge to these aquifers occurs from infiltration of precipitation upon the outcrops and, in some cases, from infiltration of streamflow (Hortness and Driscoll, 1998). Artesian conditions generally exist within these aquifers where an upper confining layer is present. Flowing wells and artesian springs that originate from confined aquifers are common around the periphery of the Black Hills.The purpose of this map is to show the altitude of the top (structure contours) of the Minnelusa Formation within the area of the Black Hills Hydrology Study. The depth to the top of the Minnelusa Formation can be estimated at a specific site by subtracting the altitude of the top of the formation from the topographic elevation. However, caution is urged in determining the depth to the top of the formation in areas on the map where the contours are approximately located.

Altitude of the Top of the Minnekahta Limestone in the Black Hills area, South Dakota, 1999

USGS Publications Warehouse

Carter, Janet M.; Redden, Jack A.

2000-01-01

This map is a product of the Black Hills Hydrology Study, which was initiated in 1990 to assess the quantity, quality, and distribution of surface water and groundwater in the Black Hills area of South Dakota (Driscoli, 1992). This long-term study is a cooperative effort between the U.S. Geological Survey (USGS), the South Dakota Department of environment and Natural Resources, and the West Dakota Water development District, which represents various local and county cooperators. This map is part of a series of 1:100,000-scale maps for the study. The maps include a hydrogeologic map, structure-contour maps (altitudes of the tops of formations) for five formations that contain major aquifers in the study area, and potentiometric maps for these five major aquifers (the Inyan Kara. Minnekahta, Minnelusa, Madison, and Deadwood aquifers).The study area consists of the topographically defined Black Hills and adjacent areas located in western South Dakota. The Black Hills area is an elongated, dome-shaped feature, about 125 miles long and 60 miles wide, which was uplifted during the Laramide orogeny (Feldman and Heimlich, 1980). The oldest geologic units in the study area are Precambrian metamorphic and igneous rocks, which are exposed in the central core of the Black Hills. Surrounding the Precambrian core is a layered series of sedimentary rocks including limestones, sandstones, and shales that are exposed in roughly concentric rings around the uplifted flanks of the Black Hills. The bedrock sedimentary units typically dip away from the uplifted Black Hills at angles that approach or exceed 10 degrees near the outcrops, and decrease with distance from the uplift. Many of the sedimentary units contain aquifers, both within and beyond the study area. Recharge to these aquifers occurs from infiltration of precipitation upon the outcrops and, in some cases, from infiltration of streamflow (Hortness and Driscoll, 1998). Artesian conditions generally exist within these aquifers where an upper confining layer is present. Flowing wells and artesian springs that originate from confined aquifers are common around the periphery of the Black Hills.The purpose of this map is to show the altitude of the top(structure contours) of the Minnekahta limestone within the area of the Black Hills Hydrology Study. The depth to the top of the Minnekahta Limestone can be estimated at a specific site by subtracting the altitude of the top of the formation from the topographic elevation. However, caution is urged in determining the depth to the top of the formation in areas on the map where the contours are approximately located.

Scramble in the South China Sea: Regional Conflict and U.S. Strategy

DTIC Science & Technology

2013-02-14

Basin Phu Kanh Basin Cuu Long Basin Nam Con Son Basin South China Sea Platform Baram Delta Basin Palawan Shelf Basin Greater Sarawak Basin...Basin 183 10,599 Greater Sarawak Basin 618 34,083 Phu Kanh Basin 116 10,679 Baram Delta Basin 4,056 12,546 Cuu Long Basin 1,599 487 Palawan Shelf

Hydraulic Properties and Water Level Changes in the Missouri Coteau near Minot N.D

NASA Astrophysics Data System (ADS)

Kilroy, K. C.; Nissen, J. A.

2012-12-01

The city of Minot, N.D. is experiencing rapid population growth due to expansion of petroleum extraction from oil shale in the Williston Basin. Minot is located on the edge of the Missouri Escarpment, which separates the Missouri Coteau upland (site of Prairie Potholes) to the southwest and the Mouse (Souris) River Basin to the northeast (lowland Drift Prairie). The Missouri Coteau is underlain by horizontally bedded Fort Union Formation (Tertiary sand, silt, and clay) and covered with Quaternary glacial till, as much as 130-feet thick. Surface water on the crest of the Missouri Coteau is deranged and the high areas do not flow coherently out of the area, but lower elevation slopes do have integrated dendritic drainage. Despite deranged surface-water flow in the Missouri Coteau upland area, ground water slopes more or less coherently to the North East towards the Mouse River. The North East slope of the Missouri Coteau has primarily agricultural land use, mostly dry-land farming. There is little irrigated farming here. Water is used for livestock and domestic purposes. Ground water levels were compiled for the region in and around Minot in 1968, and more-recently-drilled wells are documented in the web site of the N.D. State Water Commission. About 20-years ago, the North Prairie Rural Water District (NPRWD) expanded into the Missouri Coteau (near Minot). The North Prairie Rural water is softer than local well water; it is much preferred by residents; and as a result the water district has undergone expansion. This has led to disuse, neglect, and abandonment of rural wells. In addition, the current time frame appears to be the beginning of a sustained period of urban growth and much more rapid ground water use in the Minot area. We hypothesize that water levels have fallen since the 1960's, particularly in and near the Minot City well field. We also hypothesize that more detailed study of hydraulic properties, horizontal extent of local geologic materials, and glacial features, may yield a better understanding of local conditions at the end of the Pleistocene Epoch. Water levels were canvased in 30 wells along a line running N 45o E (at a right angle to the trend of Missouri Escarpment) from the crest of the Missouri Coteau near Rice Lake, through the Minot city well field near the Mouse (Souris) River, a horizontal distance of 20 miles, during the summer of 2012. Water levels have dropped as much as 23-feet in wells dug into Mouse River Alluvium, but little water level drop has occurred in the Missouri Coteau uplands. There are flowing wells on the lower slopes of the Missouri Coteau. Most flowing wells appear to be associated with deeply incised Mouse River tributaries, locally called: "coulees", and wells deep enough to penetrate through glacial till into underlying Ft. Union Formation. Glacial till appears to form a confining layer over the deeper Fort Union Formation allowing the accumulation of water pressure leading to artesian and flowing conditions. There is little evidence of water level decline in the area of flowing wells. There is however, an interesting correlation of flowing wells with polygonally patterned ground, which look suspiciously like relicts of peri-glacial pingoes. Water levels higher on the Missouri Coteau (furthest from Minot) show little change.

Surface water, groundwater and unified 3D-crack network as a triple coupling dynamic system for a river watershed functioning - manifestation in catastrophic floods

NASA Astrophysics Data System (ADS)

Trifonova, Tatiana; Tulenev, Nikita; Trifonov, Dmitriy; Arakelian, Sergei

2014-05-01

1. Surface water and groundwater interaction model under conditions of huge level of precipitation in catastrophic floods and mudflows for mountain river watershed is introduced. Seismic processes and volcanic activity impact on the formation of disastrous floods due to dramatic change of the pressure field in groundwater horizons, is under discussion for such a triple coupling system, i.e. surface water - groundwater - crack network. Under the conception we analyze recent (2013) catastrophic water events: the catastrophic floods in Western Europe (May-June, 2013), in the Amur river basin, Russia/China (Aug.-Sept, 2013) and in Colorado, USA (Sept. 12-15,2013). In addition, a separate analysis is carried out for debris event in the Krimsk-city, Caucasus (Krasnodar) region, Russia (July 06-07, 2012). 2. There is a group of problems determined by dramatic discrepancies in water mass balance and other vital parameters, on the one hand, by estimation for different types of atmospheric precipitation (both torrential rain and continuous precipitations) and, on the other hand, for observable natural water events (i.e. catastrophic floods and/or mudflows/debris) on concrete territory. Analysis of many facts result in conclusion that we have the hard comparable/coincidence parameters under traditional conception for discussed events as an isolated/closed (river + rain) runoff-system. In contrast, the reasonable point of view does exist if we take into account the contribution of extra water source, which should be localized in river channel, i.e. functioning of open [(river + rain) + groundwater] flow-system has a principal meaning to understand the events occurrence. 3. The analysis and modeling for the events are carried out by us taking into account the following databases: (i) groundwater map dislocation, it resources and flow balance in studied areas, especially near the land surface being unstable in hydrological sense by many reasons, as well due to heavy rain stimulating a trigger mechanism for releasing of groundwater; (ii) the crackness/fracturing structure as a characteristic property for all rocks, being dissecting by totality of cracks/fissures and along which (in the case when a good development crack becomes a fault) a vertical and/or lateral movement (of both groundwater and surface water mass) occurs as a result of excessive strain; (iii) areas of formation and modification in time of groundwater transit system, and especially the modalities for it exit on surface by different factors including tectonic processes under adjustable conditions for both localization of earthquake epicenters/volcanos activity areas and occurring floods in respect of propagating of seismic waves and dislocation of border for lithospheric plates/magma objects in the river basin region; (iv) the way of distribution over surface for water flows/fronts in the further, which can be described by nonlinear hydrodynamic approach, e.g. by different classes of solutions for Korteweg-de Vries equation, associated with observable natural phenomena. 4. Monitoring in dynamics of state of hydrostatic/hydrodynamic pressures in underground aquifers (e.g. by artesian wells in comparison with two databases: before and after the events) is an important factor in assessing of acceptable risk for the events. Combining it with monitoring of seismic activity should allow to make a more detailed forecasting and zoning of potentially dangerous areas for such natural disasters.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peterson, J.A.; Klemme, H.D.

The main onshore basins of northwestern Africa are (1) basins in the Atlas folded geosynclinal belt adjacent to the Mediterranean Sea, (2) the Tindouf, Bechar, and Reggane basins of western Algeria and southern Morocco, and (3) the Taoudeni basin of Mauritania and Mali. Coastal basins are (1) the Essaouria basin of southwestern Morocco, (2) the Tarfaya basin of Western Sahara, (3) the Senegal basin of Senegal and western Mauritania, (4) the Sierra Leone-Liberia basin, and (5) the Ivory Coast basin. The petroleum geology and resource potential of these basins is detailed.

Gravity investigations of the Chickasaw National Recreation Area, south-central Oklahoma

USGS Publications Warehouse

Scheirer, Daniel S.; Scheirer, Allegra Hosford

2006-01-01

The geological configuration of the Arbuckle Uplift in the vicinity of Chickasaw National Recreation Area in south-central Oklahoma plays a governing role in the distribution of fresh and mineral springs within the park and in the existence of artesian wells in and around the park. A confining layer of well-cemented conglomerate lies immediately below the surface of the recreation area, and groundwater migrates from an area of meteoric recharge where rocks of the Arbuckle-Simpson Aquifer crop out as close as two kilometers to the east of the park. Prominent, Pennsylvanian-aged faults are exposed in the aquifer outcrop, and two of the fault traces project beneath the conglomerate cover toward two groups of springs within the northern section of the park. We conducted gravity fieldwork and analysis to investigate the subsurface extensions of these major faults beneath Chickasaw National Recreation Area. By defining gravity signatures of the faults where they are exposed, we infer that the Sulphur and Mill Creek Faults bend to the south-west where they are buried. The South Sulphur Fault may project westward linearly if it juxtaposes rocks that have a density contrast opposite that of that fault's density configuration in the Sulphur Syncline area. The Sulphur Syncline, whose eastern extent is exposed in the outcrop area of the Arbuckle-Simpson Aquifer, does not appear to extend beneath Chickasaw National Recreation Area nor the adjacent City of Sulphur. The South Sulphur Fault dips steeply northward, and its normal sense of offset suggests that the Sulphur Syncline is part of a graben. The Mill Creek Fault dips vertically, and the Reagan Fault dips southward, consistent with its being mapped as a thrust fault. The Sulphur and Mill Creek Synclines may have formed as pull-apart basins in a left-lateral, left-stepping strike-slip environment. The character of the gravity field of Chickasaw National Recreation Area is different from the lineated gravity field in the area of Arbuckle-Simpson Aquifer outcrop. This change in character is not due to the presence of the overlying conglomerate layer, which is quite thin (<100 m) in the area of the park with the springs. The presence of relatively high-density Precambrian basement rocks in a broader region suggests that significant gravity anomalies may arise from variations in basement topography. Understanding of the geological configuration of Chickasaw National Recreation Area can be improved by expanding the study area and by investigating complementary geophysical and borehole constraints of the subsurface.

Water resources of the Mobile area, Alabama, with a section on salinity of the Mobile River

USGS Publications Warehouse

Robinson, W.H.; Powell, William J.; Brown, Eugene; Corps of Engineers, U.S. Army

1956-01-01

Water is an abundant resource of the Mobile area. The Mobile River has an estimated average flow of 60, 000 cubic feet per second (cfs), or about 39,000 million gallons per day (mgd). It is the largest single source of water. Water is available in substantial quantities from the many local streams and extensive water-bearing formations almost anywhere in the area. Surface water is low in dissolved mineral matter and is extremely soft. Salt water moving up the Mobile River from Mobile Bay during periods of low river flow, however, limits the use of that stream as a source of supply. The principal water-bearing formations are the alluvium and sediments of Miocene age. The Miocene strata dip toward the southwest, forming an artesian basin in the downtown area of Mobile. Small groundwater supplies can be developed practically everywhere, and supplies for industrial or other large-scale uses are available north of Mobile. The average use of water from all sources in the area during 1954 was about 356 mgd, of which about 20 mgd was used for domestic supplies and 336 mgd was used by industry. An estimated 42 mgd of ground water is used in the Mobile area. The discharge from wells used by industry ranges from 10 to 1,500 gallons per minute (gpm}, and the specific capacity of the large-capacity wells ranges from less than 6 to about 6 3 gpm per foot of drawdown. Concentrated pumping in the downtown area of Mobile between 1941 and 1945 resulted in encroachment of salt water from the Mobile River into the alluvium. Because of a decrease in pumping in that vicinity, the sodium chloride content of the water has decreased substantially since 1945. The quality of ground water is variable. Hardness of waters sampled ranged from 1 to 2, 190 parts per million (ppm}, the dissolved solids from 27 to 13, 000 ppm, and the chloride from 2.2 to 6,760 ppm. The water of best quality occurs between McIntosh and Prichard, and the water of poorest quality occurs in the downtown area of Mobile. The water-supply systems presently developed in the metropolitan area could furnish a moderate increase without taxing their facilities; with some increase in plant and pumping facilities, they could support a substantial increase. Industries outside the metropolitan area must develop their own supplies from local streams or wells.

Tectonic framework of Turkish sedimentary basins

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yilmaz, P.O.

1988-08-01

Turkey's exploration potential primarily exists in seven onshore (Southeast Turkey platform, Tauride platform, Pontide platform, East Anatolian platform, Interior, Trace, and Adana) basins and four offshore (Black Sea, Marmara Sea, Aegean Sea, and Mediterranean Sea) regional basins formed during the Mesozoic and Tertiary. The Mesozoic basins are the onshore basins: Southeast Turkey, Tauride, Pontide, East Anatolian, and Interior basins. Due to their common tectonic heritage, the southeast Turkey and Tauride basins have similar source rocks, structural growth, trap size, and structural styles. In the north, another Mesozoic basin, the Pontide platform, has a much more complex history and very littlemore » in common with the southerly basins. The Pontide has two distinct parts; the west has Paleozoic continental basement and the east is underlain by island-arc basement of Jurassic age. The plays are in the upper Mesozoic rocks in the west Pontide. The remaining Mesozoic basins of the onshore Interior and East Anatolian basins are poorly known and very complex. Their source, reservoir, and seal are not clearly defined. The basins formed during several orogenic phases in mesozoic and Tertiary. The Cenozoic basins are the onshore Thrace and Adana basins, and all offshore regional basins formed during Miocene extension. Further complicating the onshore basins evolution is the superposition of Cenozoic basins and Mesozoic basins. The Thrace basin in the northwest and Adana basin in the south both originate from Tertiary extension over Tethyan basement and result in a similar source, reservoir, and seal. Local strike-slip movement along the North Anatolian fault modifies the Thrace basin structures, influencing its hydrocarbon potential.« less

Geohydrology of Brooks, Lowndes, and western Echols counties, Georgia

USGS Publications Warehouse

Krause, R.E.

1979-01-01

The principal artesian aquifer, a limestone of Eocene to Miocene age, is the main source of water supply for Brooks, Lowndes, and western Echols Counties in south Georgia. Pumpage of about 22 million gallons perday from this prolific aquifer has not posed any problems regarding declining water levels or depletion of the reservoir. However, water-quality problems do occur in the Valdosta area. Seepage-run measurements indicate that the Withlacoochee River north of Valdosta contributes an average of 112 cubic feet per second of water to caverns and sinkholes that recharge the aquifer. Wells near the recharge area withdraw relatively unfiltered water with iron concentration and color intensity exceeding standards for drinking water. South of Valdosta, water from the aquifer contains as much as 3.0 milligrams per liter of hydrogen sulfide, rendering the water unfit for drinking. Water high in sulfate concentration occurs below 550 feet in the lower part of the aquifer in Valdosta, and is assumed to be present at that depth throughout the study area. Generally, sufficient quantities of freshwater can be obtained without drilling to this depth.

District heating systems in Oradea, Romania

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lund, J.W.

1997-08-01

Oradea is located on the Crisul Repede River, in the northwestern corner of Romania almost due west of Budapest, Hungary. The city has a population around half a million people and can trace its origins back to the Neolithic Age. It was an urban settlement beginning in the 13th century and has been an economic and cultural center for the region. It is a geothermal city with 12 wells drilled within the city limits, six in the nearby Felix Spa and five in the Bors geothermal area to the west, with one doublet set at Nufarul. Currently, there are amore » variety of geothermal uses in the area, including space and greenhouse heating, domestic hot water supply, process heat, balneology and swimming pools. Wellhead temperatures range from 70 to 105{degrees}C with artesian flows of from 5 to 25 L/s. The present installed capacity is 25 MWt and the heat supply is estimated at 60,000 MWh per year (216,000 GJ/yr). With pumping, the production would double and adding four more doublets, the installed capacity be increased to 65 MWt.« less

Detection of human adenovirus, rotavirus and enterovirus in water samples collected on dairy farms from Tenente Portela, Northwest of Rio Grande do Sul, Brazil

PubMed Central

Spilki, Fernando Rosado; da Luz, Roger Bordin; Fabres, Rafael Bandeira; Soliman, Mayra Cristina; Kluge, Mariana; Fleck, Juliane Deise; Rodrigues, Manoela Tressoldi; Comerlato, Juliana; Cenci, Alexander; Cerva, Cristine; Dasso, Maurício Gautério; Roehe, Paulo Michel

2013-01-01

Viral gastroenteritis and other waterborne diseases are a major concern for health in Brazil. A number of studies were conducted about the presence of viruses on water samples from Brazilian areas. However, the knowledge about the occurrence of viral contamination of drinking water sources in rural settings of the country is insufficient. On the present work, 15 samples from 5 dairy farms located at the municipality of Tenente Portela were collected and analysed for the presence of human adenoviruses (HAdV), as well as human enteroviruses (EV) and rotaviruses (RV). HAdV was present on 66.66% of the water samples, and have been found in all samples from artesian wells and springs, which are used as sources of drinking water for the individuals inhabiting those farms. EV and RV found only in one sample each. The detection rates of HAdV on the water from these dairy farms are alarming and point towards a situation of elevated environmental contamination by fecal microorganisms of human origin and poor basic sanitation conditions. PMID:24516464

Controlled induced recharge tests at Kalamazoo, Michigan

USGS Publications Warehouse

Deutsch, Morris

1962-01-01

This article discusses the results of a controlled field testing program, which indicated that definite hydraulic and other advantages may be gained from induced recharging as practiced at Kalamazoo, Michigan. Results include the following: water levels and artesian pressures can be maintained at high stages, the results are lower pumping lifts and substantial reductions in the amount of power used for pumping; the high water levels permit increased rates of withdrawal during periods of peak demand; encroachment of poor quality water from other aquifers is minimized; the surface water induced into the aquifer is filtered naturally through great thicknesses of earth materials; natural underground storage is used to conserve and protect water, which otherwise would flow largely to waste; and, significant supplemental benefits, including flood control, have been derived. The tests demonstrated that it is possible to manipulate the regimen of a complex hydrologic system for definite hydraulic benefits with predictable results. Furthermore with current methods, quantitative evaluations may be made of the effects of induced recharge. The results of the tests, therefore, are applicable in other areas of similar hydrogeologic environments.

Coseismic water level changes induced by two distant earthquakes in multiple wells of the Chinese mainland

NASA Astrophysics Data System (ADS)

Ma, Yuchuan; Huang, Fuqiong

2017-01-01

Coseismic water level oscillations, or step-like rises and step-like drops were recorded in 159 wells throughout the Chinese mainland due to the 2015 Nepal Mw 7.8 earthquake, and 184 wells for the 2011 Japan Mw 9.0 earthquake. The earthquake magnitude, and the associated dynamic stresses, has positive roles in both the sensitivity of water level to earthquake induced change, and the amplitude and duration of resulting coseismic water level changes. Wells whose water levels are sensitive to Earth tides have high potential to response to earthquakes. Polarities of step-like changes (rises or drops) are locally controlled and spatially variable, with artesian wells generally recording water-level rises. Permeability enhancement was assessed as a mechanism responsible for step-like changes by analyzing the tidal phase responses. Permeability variations are inferred for 17 out of 95 wells with step-like changes during the Nepal earthquake and for 32 out of 105 wells following the Japan earthquake; however, only 6 wells have permeability variations after both earthquakes.

The impact of droughts and climate change on sinkhole occurrence. A case study from the evaporite karst of the Fluvia Valley, NE Spain.

PubMed

Linares, Rogelio; Roqué, Carles; Gutiérrez, Francisco; Zarroca, Mario; Carbonel, Domingo; Bach, Joan; Fabregat, Ivan

2017-02-01

This work introduces the concept that sinkhole frequency in some karst settings increases during drought periods. This conception is tested in a sector of the Fluvia River valley in NE Spain, where subsidence phenomena is related to the karstification of folded Eocene evaporite formations. In the discharge areas, the evaporites behave as confined aquifers affected by hypogene karstification caused by aggressive artesian flows coming form an underlying carbonate aquifer. A sinkhole inventory with chronological data has been constructed, revealing temporal clusters. Those clusters show a good correlation with drought periods, as revealed by precipitation, river discharge and piezometric data. This temporal association is particularly obvious for the last and current drought starting in 1998, which is the most intense of the record period (1940-present). Climatic projections based on recent studies foresee an intensification of the droughts in this sector of NE Spain, which could be accompanied by the enhancement of the sinkhole hazard and the associated risks. Copyright © 2016 Elsevier B.V. All rights reserved.

Subsurface storage of freshwater in south Florida; a prospectus

USGS Publications Warehouse

Merritt, M.L.; Meyer, F.W.; Sonntag, W.H.; Fitzpatrick, D.J.

1983-01-01

A method of increasing storage capacity for freshwater in south Florida is to use brackish artesian aquifers as reservoirs. In this way, water deficiencies occurring during the annual dry season can be offset by surplus water obtained during the wet season and injected underground. Most of south Florida is underlain by several deep, confined, carbonate waterbearing zones which might be suitable for freshwater storage. These zones are in the Avon Park, Ocala, Suwannee, Tampa, and Hawthorn Formations. Experimental freshwater injection systems have been operated at five locations with promising, but not fully definitive, results. A determination of the feasibility of freshwater injection at a selected site begins with an assessment of the local geologic suitability. Verification of feasibility, however, requires injection and recovery tests to be performed at the site. Recovery efficiency, a measure of the success of the operation, is the amount of potable water, expressed as a percentage of the volume injected, which can be recovered before its salinity, or the concentration of other chemical constituents present in the native aquifer water, increases to the point that the recovered water is no longer useable. (USGS)

Geologic aspects of the surficial aquifer in the upper East Coast planning area, Southeast Florida

USGS Publications Warehouse

Miller, Wesley L.

1980-01-01

The Upper East Coast Planning Area, as designated by the South Florida Water Management District, consists of St. Lucie County, Martin County, and eastern Okeechobee County. The surficial aquifer is the main source of freshwater for agricultural and urban uses in the area. The geologic framework of the aquifer is displayed by contour mapping and lithologic cross sections to provide water managers with a better understanding of the natural restraints that may be imposed on future development. The surficial aquifer is primarily sand, limestone, shell, silt, and clay deposited during the Pleistocene and Pliocene Epochs. The aquifer is unconfined and under water-table conditions in most of the area, but locally, artesian conditions exits where discontinuous clay layers act as confining units. Impermeable and semipermeable clays and marls of the Tamiami (lower Pliocene) and Hawthorn Formations (Miocene) unconformably underlie the surficial aquifer and form its base. Contour lines showing the altitude of the base of the aquifer indicate extensive erosion of the Miocene sediments prior to deposition of the aquifer materials. (USGS)

The changing pattern of ground-water development on Long Island, New York

USGS Publications Warehouse

Heath, Ralph C.; Foxworthy, B.L.; Cohen, Philip M.

1966-01-01

Ground-water development on Long Island has followed a pattern that has reflected changing population trends, attendant changes in the use and disposal of water, and the response of the hydrologic system to these changes. The historic pattern of development has ranged from individually owned shallow wells tapping glacial deposits to large-capacity public-supply wells tapping deep artesian aquifers. Sewage disposal has ranged from privately owned cesspools to modern large-capacity sewage-treatment plants discharging more than 70 mgd of water to the sea. At present (1965), different parts of long Island are characterized by different stages of ground-water development. In parts of Suffolk County in eastern long Island, development is similar to the earliest historical stages. Westward toward New York City, ground-water development becomes more intensive and complex, and the attendant problems become more acute. The alleviation of present problems and those that arise in the future will require management decisions based on the soundest possible knowledge of the hydrologic system, including an understanding of the factors involved in the changing pattern of ground-water development on the island.

Susceptibility of coastal plain aquifers to contamination, Fairfax County, Virginia; a computer composite map

USGS Publications Warehouse

Johnston, Richard H.; Van Driel, J. Nicholas

1978-01-01

A map is presented that classifies the Coastal Plain of Fairfax County, Virginia according to the susceptibility of the principal sand aquifers to contamination from surface sources. The following classification is used: (1) areas where leachate can readily enter the principal sand aquifers, (2) areas offering great natural protection against migration of leachate into the aquifers, and, (3) areas where the contamination risk is uncertain and onsite investigations are needed. Approximately 20 percent of the area is in the high-risk category. The map is computer generated and was made by combining four source maps depicting those hydrogeologic factors related to movement of contaminants into the aquifers. These factors are (1) lithologic character of the upper 25 feet of sediments, (2) clay thickness above uppermost sand aquifer, (3) hydraulic gradient direction and head difference between water table and artesian head in principal aquifer, and (4) areal occurrence of moderate to high transmissiviry aquifers. The map is designed to be used by planners with little or no earth-science background, however, a technical discussion for hydrologists and geologists is also provided. (Woodard-USGS)

Origin of marginal basins of the NW Pacific and their plate tectonic reconstructions

NASA Astrophysics Data System (ADS)

Xu, Junyuan; Ben-Avraham, Zvi; Kelty, Tom; Yu, Ho-Shing

2014-03-01

Geometry of basins can indicate their tectonic origin whether they are small or large. The basins of Bohai Gulf, South China Sea, East China Sea, Japan Sea, Andaman Sea, Okhotsk Sea and Bering Sea have typical geometry of dextral pull-apart. The Java, Makassar, Celebes and Sulu Seas basins together with grabens in Borneo also comprise a local dextral, transform-margin type basin system similar to the central and southern parts of the Shanxi Basin in geometry. The overall configuration of the Philippine Sea resembles a typical sinistral transpressional "pop-up" structure. These marginal basins except the Philippine Sea basin generally have similar (or compatible) rift history in the Cenozoic, but there do be some differences in the rifting history between major basins or their sub-basins due to local differences in tectonic settings. Rifting kinematics of each of these marginal basins can be explained by dextral pull-apart or transtension. These marginal basins except the Philippine Sea basin constitute a gigantic linked, dextral pull-apart basin system.

Hydrogeologic framework of sedimentary deposits in six structural basins, Yakima River basin, Washington

USGS Publications Warehouse

Jones, M.A.; Vaccaro, J.J.; Watkins, A.M.

2006-01-01

The hydrogeologic framework was delineated for the ground-water flow system of the sedimentary deposits in six structural basins in the Yakima River Basin, Washington. The six basins delineated, from north to south are: Roslyn, Kittitas, Selah, Yakima, Toppenish, and Benton. Extent and thicknesses of the hydrogeologic units and total basin sediment thickness were mapped for each basin. Interpretations were based on information from about 4,700 well records using geochemical, geophysical, geologist's or driller's logs, and from the surficial geology and previously constructed maps and well interpretations. The sedimentary deposits were thickest in the Kittitas Basin reaching a depth of greater than 2,000 ft, followed by successively thinner sedimentary deposits in the Selah basin with about 1,900 ft, Yakima Basin with about 1,800 ft, Toppenish Basin with about 1,200 ft, Benton basin with about 870 ft and Roslyn Basin with about 700 ft.

Effects of agricultural land-management practices on water quality in northeastern Guilford County, North Carolina, 1985-90

USGS Publications Warehouse

Harned, Douglas A.

1995-01-01

The effects of selected agricultural land-management practices on water quality were assessed in a comparative study of four small basins in the Piedmont province of North Carolina. Agricultural practices, such as tillage and applications of fertilizer and pesticides, are major sources of sediment, nutrients, and pesticides in surface water, and of nutrients and pesticides in ground water. The four study basins included two adjacent row-crop fields, a mixed land-use basin, and a forested basin. One of the row-crop fields (7.4 acres) was farmed by using conservation land-management (CLM) practices, which included strip cropping, contour plowing, field borders, and grassed waterways. The other row-crop field (4.8 acres) was farmed by using standard land-management (SLM) practices, which included continuous cropping, straight-row plowing without regard to land topography, and poorly maintained waterways. The mixed land-use basin (665 acres) was monitored to compare water quality in surface water as SLM practices were converted to CLM practices during the project. The forested basin (44 acres) provided background surface-water hydrologic and chemical-quality conditions. Surface-water flow was reduced by 18 percent by CLM practices compared to surface-water flow from the SLM practices basin. The thickness of the unsaturated zone in the row-crop basins ranged from a few feet to 25 feet. Areas with thick unsaturated zones have a greater capacity to intercept and store nutrients and pesticides than do areas with thinner zones. Sediment concentrations and yields for the SLM practices basin were considerably higher than those for the other basins. The median sediment concentration in surface water for the SLM basin was 3.4 times that of the CLM basin, 8.2 times that of the mixed land-use basin, and 38.4 times that of the forested basin. The total sediment yield for the SLM basin was 2.3 times that observed for the CLM basin, 14.1 times that observed for the mixed land-use basin, and 19.5 times the yield observed for the forested basin. Nutrient concentrations in surface water from the row-crop and mixed land-use basins were higher than those measured in the forested basin and in precipitation collected near the row-crop basins. The SLM basin generally had the highest concentrations of total nitrogen, nitrite plus nitrate, total phosphorus (equivalent to the mixed land-use basin), and potassium. Nutrient concentrations in soil water and ground water were less than concentrations in surface water for the row-crop basins. Nutrient concentrations generally were at least slightly below the root zone (3-foot depth) and in ground water. Differences in nutrient yields among basins had patterns similar to those observed for nutrient concentrations. The total nitrogen yield for the SLM basin was 1.2 times the yield for the CLM basin, 1.9 times the yield for the mixed land-use basin, and 4.2 times the yield for the forested basin. The total phosphorus yield for the SLM basin was 1.7 times the yield for the CLM basin, 3.3 times the yield for the mixed land-use basin, and 7.8 times the yield for the forested basin. No significant differences in pesticide concentrations in surface water were identified between those measured in the SLM basin and those measured in the CLM basin. Significantly higher pesticide concentrations were observed at the row-crop basins compared with those observed at the mixed land-use basin probably because sampling sites for the row-crop basins were closer to the pesticide sources. No pesticides were detected in the forested basin. Comparisons of pesticide concentrations in soil from the two row-crop basins indicated some differences. Concentrations of the soil pesticides isopropalin and flumetralin were higher in the SLM basin than in the CLM basin. The surface-water quality of the mixed land-use basin generally was less affected by agricultural nonpoint sources than that of the smaller row-crop b

Geometry, structure, and concealed lithology of the San Rafael Basin, southeastern Arizona

USGS Publications Warehouse

Bultman, Mark W.

1999-01-01

The contiguous United States has been well explored for exposed conventional mineral deposits. Therefore, it is likely that many economically viable and strategically significant conventional undiscovered mineral deposits will be found in bedrock concealed beneath basin sediments. Mineral resource assessments must incorporate an understanding of the geometry, structure, and concealed lithology of basins in order to be accurate. This report presents an analysis of the basin geometry and structure of the San Rafael basin in southeastern Arizona. In addition, a new methodology for inferring concealed lithology is presented and applied in the San Rafael basin. Gravity data is used to model the geometry of the basin using recent models of sediment density vs. depth developed in the region. This modeling indicates that the basin has a maximum depth of approximately 1.05 km plus or minus 0.10 km. In the southern portion, the basin can be modeled as an asymmetric graben faulted on the western margin. The northern portion of the basin is structurally more complex and may have high angle faults on the western, northern, and eastern margin. Near-ground closely spaced Earth’s total intensity magnetic field data is used to locate concealed faults within the basin. This data is also used to infer lithology concealed by shallow basin sediments. Airborne Earth’s total intensity magnetic field data is used to help infer concealed lithology in deep portions of the basin. The product of integrating all data and interpretations is a map which presents the geometry of the basin, faults and contacts concealed by basin sediments, and an estimate of the bedrock lithology concealed by basin sediment. Based on basin geometry and concealed lithology, the San Rafael basin has a high potential for concealed mineral deposits on its western and northern margin. In particular, a newly discovered magnetic anomaly in the northern portion of the basin can be modeled as a granitic intrusion with highly altered margins and may represent a potential mineral resource target. Based on the permeability and porosity of upper basin fill found in nearby basins, the San Rafael basin may contain an aquifer up to 300 meters thick over a substantial area of the basin.

Using the analytical hierarchy process to assess the environmental vulnerabilities of basins in Taiwan.

PubMed

Chang, Chia-Ling; Chao, Yu-Chi

2012-05-01

Every year, Taiwan endures typhoons and earthquakes; these natural hazards often induce landslides and debris flows. Therefore, watershed management strategies must consider the environmental vulnerabilities of local basins. Because many factors affect basin ecosystems, this study applied multiple criteria analysis and the analytical hierarchy process (AHP) to evaluate seven criteria in three phases (geographic phase, hydrologic phase, and societal phase). This study focused on five major basins in Taiwan: the Tan-Shui River Basin, the Ta-Chia River Basin, the Cho-Shui River Basin, the Tseng-Wen River Basin, and the Kao-Ping River Basin. The objectives were a comprehensive examination of the environmental characteristics of these basins and a comprehensive assessment of their environmental vulnerabilities. The results of a survey and AHP analysis showed that landslide area is the most important factor for basin environmental vulnerability. Of all these basins, the Cho-Shui River Basin in central Taiwan has the greatest environmental vulnerability.

Genome-wide association studies in Alzheimer's disease.

PubMed

Bertram, Lars; Tanzi, Rudolph E

2009-10-15

Genome-wide association studies (GWAS) have gained considerable momentum over the last couple of years for the identification of novel complex disease genes. In the field of Alzheimer's disease (AD), there are currently eight published and two provisionally reported GWAS, highlighting over two dozen novel potential susceptibility loci beyond the well-established APOE association. On the basis of the data available at the time of this writing, the most compelling novel GWAS signal has been observed in GAB2 (GRB2-associated binding protein 2), followed by less consistently replicated signals in galanin-like peptide (GALP), piggyBac transposable element derived 1 (PGBD1), tyrosine kinase, non-receptor 1 (TNK1). Furthermore, consistent replication has been recently announced for CLU (clusterin, also known as apolipoprotein J). Finally, there are at least three replicated loci in hitherto uncharacterized genomic intervals on chromosomes 14q32.13, 14q31.2 and 6q24.1 likely implicating the existence of novel AD genes in these regions. In this review, we will discuss the characteristics and potential relevance to pathogenesis of the outcomes of all currently available GWAS in AD. A particular emphasis will be laid on findings with independent data in favor of the original association.

Cyclooxygenase and lipoxygenase gene expression in the inflammogenesis of breast cancer.

PubMed

Kennedy, Brian M; Harris, Randall E

2018-05-07

We examined the expression of major inflammatory genes, cyclooxygenase-1 and 2 (COX1, COX2) and arachidonate 5-lipoxygenase (ALOX5) in 1090 tumor samples of invasive breast cancer from The Cancer Genome Atlas (TCGA). Mean cyclooxygenase expression (COX1 + COX2) ranked in the upper 99th percentile of all 20,531 genes and surprisingly, the mean expression of COX1 was more than tenfold higher than COX2. Highly significant correlations were observed between COX2 with eight tumor-promoting genes (EGR2, IL6, RGS2, B3GNT5, SGK1, SLC2A3, SFRP1 and ETS2) and between ALOX5 and ten tumor promoter genes (CD33, MYOF1, NLRP1, GAB3, CD4, IFR8, CYTH4, BTK, FGR, CD37). Expression of CYP19A1 (aromatase) was significantly correlated with COX2, but only in tumors positive for ER, PR and HER2. Tumor-promoting genes correlated with the expression of COX1, COX2, and ALOX5 are known to effectively increase mitogenesis, mutagenesis, angiogenesis, cell survival, immunosuppression and metastasis in the pathogenesis of breast cancer.

Moisture uptake of polyoxyethylene glycol glycerides used as matrices for drug delivery: kinetic modelling and practical implications.

PubMed

Qi, Sheng; Belton, Peter; McAuley, William; Codoni, Doroty; Darji, Neerav

2013-04-01

Gelucire 50/13, a polyoxyethylene glycol glyceride mixture, has been widely used in drug delivery, but its moisture uptake behaviour is still poorly understood. In this study, the effects of relative humidity, temperature, and drug incorporation on the moisture uptake of Gelucire are reported in relation to their practical implications for preparation of solid dispersions using this material. DVS combined with kinetics modelling was used as the main experimental method to study the moisture uptake behaviour of Gelucire. Thermal and microscopic methods were employed to investigate the effect of moisture uptake on the physical properties of the material and drug loaded solid dispersions. The moisture uptake by Gelucire 50/13 is temperature and relative humidity dependent. At low temperatures and low relative humidities, moisture sorption follows a GAB model. The model fitting indicated that at high relative humidities the sorption is a complex process, potentially involving PEG being dissolved and the PEG solution acting as solvent to dissolve other components. Careful control of the storage and processing environmental conditions are required when using Gelucire 50/13. The incorporation of model drugs not only influences the moisture uptake capacity of Gelucire 50/13 but also the solidification behaviour.

Moisture sorption characteristics of freeze-dried human platelets*

PubMed Central

Xu, Meng-jie; Chen, Guang-ming; Fan, Ju-li; Liu, Jin-hui; Xu, Xian-guo; Zhang, Shao-zhi

2011-01-01

Freeze-drying is a promising method for a long-term storage of human platelets. The moisture sorption characteristics of freeze-dried human platelets (FDHPs) were studied in this paper. The moisture sorption isotherms of FDHPs and freeze-dried lyophilization buffer (FDLB) were measured at 4, 25, and 37 °C. The experimental data were fitted to Brunauer-Emmett-Teller (BET) and Guggenheim-Anderson-de Boer (GAB) equations. There were no significant statistical differences (P>0.05) between the sorption characteristics of FDHPs and FDLB at 4 and 25 °C, while FDHPs absorbed more water at 37 °C. The net isosteric heat of sorption was derived. The heat for FDHPs showed an abnormal negative value at low moisture contents when 25 and 37 °C data were used. Dynamic sorption experiments were carried out at 25 °C with environmental water activity controlled at 0.75, 0.85, and 0.90. The moisture diffusion coefficient was fitted to be 8.24×10−12 m2/s when experimental data at initial time were used. These results would be helpful in choosing prehydration and storage condition for FDHPs. PMID:21370506

Enhanced Prediction of Src Homology 2 (SH2) Domain Binding Potentials Using a Fluorescence Polarization-derived c-Met, c-Kit, ErbB, and Androgen Receptor Interactome*

PubMed Central

Leung, Kin K.; Hause, Ronald J.; Barkinge, John L.; Ciaccio, Mark F.; Chuu, Chih-Pin; Jones, Richard B.

2014-01-01

Many human diseases are associated with aberrant regulation of phosphoprotein signaling networks. Src homology 2 (SH2) domains represent the major class of protein domains in metazoans that interact with proteins phosphorylated on the amino acid residue tyrosine. Although current SH2 domain prediction algorithms perform well at predicting the sequences of phosphorylated peptides that are likely to result in the highest possible interaction affinity in the context of random peptide library screens, these algorithms do poorly at predicting the interaction potential of SH2 domains with physiologically derived protein sequences. We employed a high throughput interaction assay system to empirically determine the affinity between 93 human SH2 domains and phosphopeptides abstracted from several receptor tyrosine kinases and signaling proteins. The resulting interaction experiments revealed over 1000 novel peptide-protein interactions and provided a glimpse into the common and specific interaction potentials of c-Met, c-Kit, GAB1, and the human androgen receptor. We used these data to build a permutation-based logistic regression classifier that performed considerably better than existing algorithms for predicting the interaction potential of several SH2 domains. PMID:24728074

The role of Mesozoic sedimentary basin tapers on the formation of Cenozoic crustal shortening structures and foredeep in the western Sichuan Basin, China

NASA Astrophysics Data System (ADS)

Wang, M.

2017-12-01

The foreland basin records important clues of tectonic and sedimentary process of mountain-building, thus to explore its dynamic mechanism on the formation is an important issue of the mountain-basin interaction. The Longmen Shan fold-and-thrust belt and its adjacent Sichuan basin located in the eastern margin of Tibetan Plateau, are one of the most-concerned regions of studying modern mountain-building and seismic process, and are also a natural laboratory of studying the dynamics of the formation and development of foreland basin. However, it still need further explore on the mechanics of the development of the Cenozoic foreland basin and thrust-belts in the western Sichuan Basin. The Longmen Shan thrust belt has experienced multi-stages of tectonics evolution, foreland basin formation and topography growth since Late Triassic, and whether the early formed basin architecture and large Mesozoic sedimentary basin taper can influence the formation and development of the Cenozoic foreland basin and thrust belts? To solve these issues, this project aim to focus on the Cenozoic foreland basin and internal crustal shortening structures in the western Sichuan basin, on the basis of growth critical wedge taper theory. We will reconstruct the shape of multi-phases of sedimentary basin tapers, the temporal-spatial distribution of crustal shortening and thrusting sequences, and analyze the control mechanism of Mesozoic sedimentary basin taper on the formation of Cenozoic foreland basins, and final explore the interaction between the tectonics geomorphology, stress field and dynamic propagation of foreland basin.

Geologic and hydrologic control of chloride contamination in aquifers at Brunswick, Glynn County, Georgia

USGS Publications Warehouse

Gregg, Dean O.; Zimmerman, Everett Alfred

1974-01-01

Water from a brackish-water zone (1,050-1,350 ft) has concentrations as high as 2,150 milligrams per liter chloride, and concentrations are suspected to be higher than 3,000 milligrams per liter chloride. This brackish water has been identified as the source of the water that contaminates the upper and lower fresh-water-bearing zones of the principal artesian aquifer. The confining unit separating the fresh and brackish water seems to contain breaks that act as vertical conduits for the movement of brackish water into the fresh-water zones of the aquifer. Faults are suspected to be responsible for the breaks in the confining unit. The rate of upward movement of brackish water seems to be a function of the rate of water-level decline in the aquifer. There are two main areas of brackish-water intrusion. One area is near Bay and Prince Streets, and the other area is near Reynolds and Q Streets. Successive maps showing chloride ion concentration trace the movement of the chloride front northward in the Bay Street area at the rate of about 350 feet per year toward the center of pumping. An average of about 400 gallons per minute of water containing 2,000 milligrams per liter chloride invaded the upper water-bearing zone between December 1962 and December 1966. A like amount may have entered the lower water-bearing zone. Maximum chloride concentration in the upper water-bearing zone is 1,540 milligrams per liter in the Bay Street area and 640 milligrams per liter in the Reynolds Street area. In a few areas, where individual wells have been drilled deep enough to penetrate the confining unit over the brackish-water zone, the well furnishes a conduit for brackish water to recharge the fresh-water aquifer. Plugging the lower part of these wells usually reduces the chloride concentration of the water. The chloride concentration of water in the principal artesian aquifer can probably be reduced by use of interceptor wells, relief wells, or well-field spacing. Interceptor wells would prevent laterally moving brackish water from contaminating a well field. A relief well would tap and withdraw poor quality water from only the brackish-water zone to lower the head in that zone and decrease the rate of leakage into the fresh-water aquifer. Wider spacing of wells would prevent the development of a deep cone of depression and the steeper hydraulic gradients that accompany it. The brackish water pumped by the interceptor or relief wells could be used for industry, aquaculture, recreation, or for other processes in which the chloride content is not critical.

Potential for saltwater intrusion into the lower Tamiami aquifer near Bonita Springs, southwestern Florida

USGS Publications Warehouse

Shoemaker, W. Barclay; Edwards, K. Michelle

2003-01-01

A study was conducted to examine the potential for saltwater intrusion into the lower Tamiami aquifer beneath Bonita Springs in southwestern Florida. Field data were collected, and constant- and variable-density ground-water flow simulations were performed that: (1) spatially quantified modern and seasonal stresses, (2) identified potential mechanisms of saltwater intrusion, and (3) estimated the potential extent of saltwater intrusion for the area of concern. MODFLOW and the inverse modeling routine UCODE were used to spatially quantify modern and seasonal stresses by calibrating a constant-density ground-water flow model to field data collected in 1996. The model was calibrated by assuming hydraulic conductivity parameters were accurate and by estimating unmonitored ground-water pumpage and potential evapotranspiration with UCODE. Uncertainty in these estimated parameters was quantified with 95-percent confidence intervals. These confidence intervals indicate more uncertainty (or less reliability) in the estimates of unmonitored ground-water pumpage than estimates of pan-evaporation multipliers, because of the nature and distribution of observations used during calibration. Comparison of simulated water levels, streamflows, and net recharge with field data suggests the model is a good representation of field conditions. Potential mechanisms of saltwater intrusion into the lower Tamiami aquifer include: (1) lateral inland movement of the freshwater-saltwater interface from the southwestern coast of Florida; (2) upward leakage from deeper saline water-bearing zones through natural upwelling and upconing, both of which could occur as diffuse upward flow through semiconfining layers, conduit flow through karst features, or pipe flow through leaky artesian wells; (3) downward leakage of saltwater from surface-water channels; and (4) movement of unflushed pockets of relict seawater. Of the many potential mechanisms of saltwater intrusion, field data and variable-density ground-water flow simulations suggest that upconing is of utmost concern, and lateral encroachment is of second-most concern. This interpretation is uncertain, however, because the predominance of saltwater intrusion through leaky artesian wells with connection to deeper, more saline, and higher pressure aquifers was difficult to establish. Effective management of ground-water resources in southwestern Florida requires an understanding of the potential extent of saltwater intrusion in the lower Tamiami aquifer near Bonita Springs. Variable-density, ground-water flow simulations suggest that when saltwater is at dynamic equilibrium with 1996 seasonal stresses, the extent of saltwater intrusion is about 100 square kilometers areally and 70,000 hectare-meters volumetrically. The volumetric extent of saltwater intrusion was most sensitive to changes in recharge, ground-water pumpage, sea level, salinity of the Gulf of Mexico, and the potentiometric surface of the sandstone aquifer, respectively.

Three-dimensional saturated-unsaturated flow with axial symmetry to a partially penetrating well in a compressible unconfined aquifer

NASA Astrophysics Data System (ADS)

Tartakovsky, Guzel D.; Neuman, Shlomo P.

2007-01-01

A new analytical solution is presented for the delayed response process characterizing flow to a partially penetrating well in an unconfined aquifer. The new solution generalizes that of Neuman (1972, 1974) by accounting for unsaturated flow above the water table. Three-dimensional, axially symmetric flow in the unsaturated zone is described by a linearized version of Richards' equation in which hydraulic conductivity and water content vary exponentially with incremental capillary pressure head relative to its air entry value (defining the interface between the saturated and unsaturated zones). Unsaturated soil properties are characterized by an exponent κ having the dimension of inverse length or, equivalently, a dimensionless exponent κD = κb, where b is initial saturated thickness. Our treatment of the unsaturated zone is similar to that of Kroszynski and Dagan (1975), who, however, have ignored internal (artesian) aquifer storage. According to Kroszynski and Dagan, aquifers that are not excessively shallow have values of κD (their parameter a) much greater than 10. We find that in such typical cases, unsaturated flow has little impact on early and late dimensionless time drawdown a short distance below the water table. Unsaturated flow causes drawdown to increase slightly at intermediate dimensionless time values that represent transition from an early artesian-dominated to a late water-table-dominated flow regime. Delayed drainage from the unsaturated zone becomes less and less important as κD increases; as κD → ∞, this effect dies out, and drawdown is controlled entirely by delayed decline in the water table as in the model of Neuman. The unsaturated zone has a major impact on drawdown at intermediate time and a significant impact at early and late times, in the atypical case of κD ≤ 1, becoming the dominant factor as κD approaches zero (the soil water retention capacity becomes very large and/or saturated thickness becomes insignificant). Our new solution was used to analyze field data from a pumping test conducted by Moench et al. (2001) in a glacial outwash deposit at Cape Cod, Massachusetts. The solution was fitted individually and simultaneously to time-drawdown data from 20 piezometers and observation wells and simultaneously to data from three piezometers in each of two clusters at various depths and distances from the pumping well, with very good results. Our parameter estimates of hydraulic conductivities from the simultaneous fit are similar to those obtained previously by Moench (2004), but our estimates of specific yield and storage are smaller and larger, respectively, while our estimate of κ is not comparable with his estimates of three empirical parameters.

Altitude of the top of the Inyan Kara Group in the Black Hills area, South Dakota

USGS Publications Warehouse

Carter, Janet M.; Redden, Jack A.

2000-01-01

This map is a product of the Black Hills Hydrology Study, which was initiated in 1990 to assess the quantity, quality, and distribution of surface water and ground water in the Black Hills area of South Dakota (Driscoll, 1992). This long-term study is a cooperative effort between the U.S. Geological Survey (USGS), the South Dakota Department of Environment and Natural Resources, and the West Dakota Water Development District, which represents various local and county cooperators. This map is part of a series of 1:100,000-scale maps for the study. The maps include a hydrogeologic map, structure-contour maps (altitudes of the tops of formations) for five formations that contain major aquifers in the study area, and potentiometric maps for these five major aquifers (the Inyan Kara, Minnekahta, Minnelusa, Madison, and Deadwood aquifers).The study area consists of the topographically defined Black Hills and adjacent areas located in western South Dakota. The Black Hills area is an elongated, dome-shaped feature, about 125 miles long and 60 miles wide, which was uplifted during the Laramide orogeny (Feldman and Heimlich, 1980). The oldest geologic units in the study area are Precambrian metamorphic and igneous rocks, which are exposed in the central core of the Black Hills. Surrounding the Precambrian core is a layered series of sedimentary rocks including limestones, sandstones, and shales that are exposed in roughly concentric rings around the uplifted flanks of the Black Hills. The bedrock sedimentary units typically dip away from the uplifted Black Hills at angles that approach or exceed 10 degrees near the outcrops, and decrease with distance from the uplift. Many of the sedimentary units contain aquifers, both within and beyond the study area. Recharge to these aquifers occurs from infiltration of precipitation upon the outcrops and, in some cases, from infiltration of streamflow (Hortness and Driscoll, 1998). Artesian conditions generally exist within these aquifers where an upper confining layer is present. Flowing wells and artesian springs that originate from confined aquifers are common around the periphery of the Black Hills.The purpose of this map is to show the altitude of the top (structure contours) of the Inyan Kara Group within the area of the Black Hills Hydrology Study. The depth to the top of the Inyan Kara Group can be estimated at a specific site by subtracting the altitude of the top of the formation from the topographic elevation. However, caution is urged in determining the depth to the top of the formation in areas on the map where the contours are approximately located.

Chapter 44: Geology and petroleum potential of the Lincoln Sea Basin, offshore North Greenland

USGS Publications Warehouse

Sorensen, K.; Gautier, D.; Pitman, Janet K.; Ruth, Jackson H.; Dahl-Jensen, T.

2011-01-01

A seismic refraction line crossing the Lincoln Sea was acquired in 2006. It proves the existence of a deep sedimentary basin underlying the Lincoln Sea. This basin appears to be comparable in width and depth to the Sverdrup Basin of the Canadian Arctic Islands. The stratigraphy of the Lincoln Sea Basin is modelled in analogy to the Sverdrup Basin and the Central Spitsbergen Basin, two basins between which the Lincoln Sea intervened before the onset of seafloor spreading in the Eurasian Basin. The refraction data indicates that the Lincoln Sea Basin is capped by a kilometre-thick, low-velocity layer, which is taken to indicate an uplift history similar to, or even more favourable than, the fairway part of the Sverdrup Basin. Tectonic activity in the Palaeogene is likely to constitute the major basin scale risk. We conclude that the Lincoln Sea Basin is likely to be petroliferous and contains risked resources on the order of 1 ?? 109 barrels of oil, to which comes an equivalent amount of (associated and nonassociated) gas. ?? 2011 The Geological Society of London.

Model swapping: A comparative performance signature for the prediction of flow duration curves in ungauged basins

NASA Astrophysics Data System (ADS)

Qamar, Muhammad Uzair; Azmat, Muhammad; Cheema, Muhammad Jehanzeb Masud; Shahid, Muhammad Adnan; Khushnood, Rao Arsalan; Ahmad, Sajjad

2016-10-01

The issue of lack of donor basins for prediction of flow duration curves (FDCs) in ungauged basins (PUB) is an important area of research that is not resolved in the literature. We present a distance based approach to predict FDCs at ungauged basins by quantifying the dissimilarity between FDCs and characteristics data of basins. This enables us to bracket hydrologically similar basins and thus allowing us to estimate FDCs at ungauged basins. Generally, a single regression model is selected to make hydrological estimates at an ungauged basin. Based on established laws and theories of hydrology, we work to devise a method to improve the output of selected model for an ungauged basin by swapping it with another model in case the latter gives better coverage and statistical estimates of the nearest neighbors of an ungauged basin. We report two examples to demonstrate the effectiveness of model swapping. Out of 124 basins used in analysis, 34 basins in example 1 and 41 basins in example 2 fulfill the set criteria of model swapping and subsequently their estimates are improved significantly.

Midplate seismicity exterior to former rift-basins

USGS Publications Warehouse

Dewey, J.W.

1988-01-01

Midplate seismicity associated with some former rift-zones is distributed diffusely near, but exterior to, the rift basins. This "basin-exterior' seismicity cannot be attributed to reactivation of major basin-border faults on which uppercrustal extension was concentrated at the time of rifting, because the border faults dip beneath the basins. The seismicity may nonetheless represent reactivation of minor faults that were active at the time of rifting but that were located outside of the principal zones of upper-crustal extension; the occurrence of basin-exterior seismicity in some present-day rift-zones supports the existence of such minor basin-exterior faults. Other hypotheses for seismicity exterior to former rift-basins are that the seismicity reflects lobes of high stress due to lithospheric-bending that is centered on the axis of the rift, that the seismicity is localized on the exteriors of rift-basins by basin-interiors that are less deformable in the current epoch than the basin exteriors, and that seismicity is localized on the basin-exteriors by the concentration of tectonic stress in the highly elastic basin-exterior upper-crust. -from Author

Tectonic evolution of the Tualatin basin, northwest Oregon, as revealed by inversion of gravity data

USGS Publications Warehouse

McPhee, Darcy K.; Langenheim, Victoria E.; Wells, Ray; Blakely, Richard J.

2014-01-01

The Tualatin basin, west of Portland (Oregon, USA), coincides with a 110 mGal gravity low along the Puget-Willamette lowland. New gravity measurements (n = 3000) reveal a three-dimensional (3-D) subsurface geometry suggesting early development as a fault-bounded pull-apart basin. A strong northwest-trending gravity gradient coincides with the Gales Creek fault, which forms the southwestern boundary of the Tualatin basin. Faults along the northeastern margin in the Portland Hills and the northeast-trending Sherwood fault along the southeastern basin margin are also associated with gravity gradients, but of smaller magnitude. The gravity low reflects the large density contrast between basin fill and the mafic crust of the Siletz terrane composing basement. Inversions of gravity data indicate that the Tualatin basin is ∼6 km deep, therefore 6 times deeper than the 1 km maximum depth of the Miocene Columba River Basalt Group (CRBG) in the basin, implying that the basin contains several kilometers of low-density pre-CRBG sediments and so formed primarily before the 15 Ma emplacement of the CRBG. The shape of the basin and the location of parallel, linear basin-bounding faults along the southwest and northeast margins suggest that the Tualatin basin originated as a pull-apart rhombochasm. Pre-CRBG extension in the Tualatin basin is consistent with an episode of late Eocene extension documented elsewhere in the Coast Ranges. The present fold and thrust geometry of the Tualatin basin, the result of Neogene compression, is superimposed on the ancestral pull-apart basin. The present 3-D basin geometry may imply stronger ground shaking along basin edges, particularly along the concealed northeast edge of the Tualatin basin beneath the greater Portland area.

Orientale Impact Basin: Topographic Characterization from Lunar Orbiter Laser Altimeter (LOLA) Data and Implications for Models of Basin Formation and Filling

NASA Astrophysics Data System (ADS)

Head, James; Smith, David; Zuber, Maria; Neumann, Gregory; Fassett, Caleb; Whitten, Jennifer; Garrick-Bethell, Ian

2010-05-01

The 920 km diameter Orientale basin is the youngest and most well-preserved large multi-ringed impact basin on the Moon; it has not been significantly filled with mare basalts, as have other lunar impact basins, and thus the basin interior deposits and ring structures are very well-exposed and provide major insight into the formation and evolution of planetary multi-ringed impact basins. We report here on the acquisition of new altimetry data for the Orientale basin from the Lunar Orbiter Laser Altimeter (LOLA) on board the Lunar Reconnaissance Orbiter. Pre-basin structure had a major effect on the formation of Orientale; we have mapped dozens of impact craters underlying both the Orientale ejecta (Hevelius Formation-HF) and the unit between the basin rim (Cordillera ring-CR) and the Outer Rook ring (OR) (known as the Montes Rook Formation-MRF), ranging up in size to the 630 km diameter Mendel-Rydberg basin just to the south of Orientale; this crater-basin topography has influenced the topographic development of the basin rim (CR), sometimes causing the basin rim to lie at a topographically lower level than the inner basin rings (OR and Inner Rook-IR). In contrast to some previous interpretations, the distribution of these features supports the interpretation that the OR ring is the closest approximation to the basin excavation cavity. The total basin interior topography is highly variable and typically ranges ~6-7 km below the surrounding pre-basin surface, with significant variations in different quadrants. The inner basin depression is about 2-4 km deep below the IR plateau. These data aid in the understanding of the transition from peak-ring to multi-ringed basins and permit the quantitative assessment of post-basin-formation thermal response to impact energy input and uplifted isotherms. The Maunder Formation (MF) consists of smooth plains (on the inner basin depression walls and floor) and corrugated deposits (on the IR plateau); also observed are depressions interpreted to be due to local drainage, and cracks related to cooling and solidification. This configuration supports the interpretation that the MF consists of different facies of impact melt. The location of vents, the altimetric distribution, and the slopes of mare basalts of different ages permit an assessment of basin controls on mare basalt emplacement. The inner depression is floored by tilted mare basalt deposits surrounding a central pre-mare high of several hundred meters elevation and deformed by wrinkle ridges with similar topographic heights; these data permit the assessment of basin loading by mare basalts and ongoing basin thermal evolution. LOLA data for the Orientale basin thus provide new insight into models of multi-ring basin formation, important information on their early thermal evolution, and new data on the initial stages of mare basalt flooding of multi-ringed basins.

Stretching factors in Cenozoic multi-rift basins, western Gulf of Thailand

NASA Astrophysics Data System (ADS)

Kaewkor, Chanida; Watkinson, Ian

2017-04-01

The Gulf of Thailand (GoT) is the biggest petroleum producing province in Thailand. It is separated by the north-south trending Ko Kra Ridge into two main parts: the Western Area and Basinal Area. A series of horsts and grabens formed by north-south oriented extensional faults subdivides the GoT into a number of basins. The two major basins, Pattani and North Malay, are located in the Basinal Area that contains the main oil and gas fields. The Western Area comprises several smaller and shallower basins but has nonetheless resulted in commercial successes, including oil fields such as Nang Nuan (Chumphon Basin), Bualuang (Western Basin) and Songkhla (Songkhla Basin). The GoT is one of several unusual Cenozoic basins within Sundaland, the continental core of SE Asia. These basins have previously been characterized by multiple distinct phases of extension and inversion, rapid post-rift subsidence, association with low-angle normal faults; and are set within hot, thin crust similar to the Basin and Range province, but surrounded by active plate boundaries. The extensional faults systems play a major role in petroleum accumulation during syn-rift and post-rift phases in this area. This paper utilises well data and 3D seismic data from the Songkhla and Western basins of the western GoT. Structural balancing and restoration techniques are used to investigate the rate of extension and the effect on tectonostratigraphy. The basins are younger to the north, the Western basin was opened in Upper Oligocene to Lower Miocene. Stretching factors of the Western basin is approximately 1.1-1.2. Songkhla basin is the oldest basin that initial rift started in Eocene. The basin is dominated by major structures; western border fault, compressional structures related reactivated inversion fault, and inter-basinal faults. There are two main phases of tectonic activity; 1) Rifting phase which can be divided into three sub-extensional phase; Eocene, Oligocene, Lower Miocene. 2) Post-rift and subsidence from Middle Miocene to Recent. Stretching factors of Songkhla basin is approximately 1.2-1.4.

Sedimentation and tectonics in the southern Bida Basin, Nigeria: depositional response to varying tectonic context

DOE Office of Scientific and Technical Information (OSTI.GOV)

Braide, S.P.

1990-05-01

The Upper Cretaceous Bida basin of central Nigeria is sandwiched between the Precambrian schist belts of the Northern Nigerian massif and the West African craton. Of interest is the southern part of the basin, which developed in continental settings, because the facies architecture of the sedimentary fill suggests a close relation between sedimentation dynamics and basin margin tectonics. This relationship is significant to an understanding of the basin's origin, which has been controversial. A simple sag and rift origin has been suggested, and consequently dominated the negative thinking on the hydrocarbon prospects of the basin which were considered poor. Thismore » detailed study of the facies indicates rapid basin-wide changes from various alluvial fan facies through flood-basin and deltaic facies to lacustrine facies. Paleogeographic reconstruction suggests lacustrine environments were widespread and elongate. Lacustrine environments occurred at the basin's axis and close to the margins. This suggests the depocenter must have migrated during the basin's depositional history and subsided rapidly to accommodate the 3.5-km-thick sedimentary fill. Although distinguishing pull-apart basins from rift basins, based solely on sedimentologic grounds, may be difficult, the temporal migration of the depocenter, as well as the basin architecture of upward coarsening cyclicity, show a strong tectonic and structural overprint that suggests a tectonic framework for the Southern Bida basin similar in origin to a pull-apart basin.« less

Deep inflow into the Mozambique Basin

NASA Astrophysics Data System (ADS)

Read, J. F.; Pollard, R. T.

1999-02-01

More than 200 conductivity-temperature-depth (CTD) stations were worked around the Southwest Indian Ridge and Del Caño Rise as part of the World Ocean Circulation Experiment. A selection of these data provides information about the inflow of bottom water into the Mozambique Basin. The basin is closed below 3000 m, yet the inflow is significantly large, of order 1 Sv (1 Sv = 106 m3 s-1). Estimates of the basin-scale upwelling at 4000 m suggest that the vertical velocity is also large, 10 × 10-5 cm s-1 or more, an order of magnitude greater than global ocean estimates. Examination of the characteristics of the bottom water in the Mozambique and Agulhas Basins and the Prince Edward Fracture Zone shows that bottom water enters the Mozambique Basin from the Agulhas Basin and also directly from the Enderby Basin. Most of the transport enters the Mozambique Basin via the Agulhas Basin, where two regions of northward flow below 4000 m are found. The major flow, on the eastern flank of the Mozambique Ridge, is through and above the deep, extending (5900 m) trench that connects the Agulhas and Mozambique Basins. The second, weaker flow enters the Transkei Basin along the deep eastern flank of the Agulhas Plateau, then turning east into the Mozambique Basin. The only source of bottom water to the Agulhas Basin is the Enderby Basin, but a more direct route between the Enderby and Mozambique Basins exists via the Prince Edward fracture, which extends deeper than 4000 m throughout its length and links the two basins directly across the Southwest Indian Ridge. Full depth CTD stations trace the changing characteristics of the deep and bottom water in the fracture, and moored current meter data show the strength and persistence of the throughflow. Strong mixing with the overlying deep water elevates the salt content of the bottom water by comparison with the other water in the Mozambique Basin. Thus two distinct bottom waters of the Mozambique Basin originate in the same place (the Enderby Basin), and their different characteristics are solely a function of the routes they have taken and the processes encountered along the different pathways.

Recharge and Groundwater Flow Within an Intracratonic Basin, Midwestern United States.

PubMed

Panno, Samuel V; Askari, Zohreh; Kelly, Walton R; Parris, Thomas M; Hackley, Keith C

2018-01-01

The conservative nature of chloride (Cl - ) in groundwater and the abundance of geochemical data from various sources (both published and unpublished) provided a means of developing, for the first time, a representation of the hydrogeology of the Illinois Basin on a basin-wide scale. The creation of Cl - isocons superimposed on plan view maps of selected formations and on cross sections across the Illinois Basin yielded a conceptual model on a basin-wide scale of recharge into, groundwater flow within and through the Illinois Basin. The maps and cross sections reveal the infiltration and movement of freshwater into the basin and dilution of brines within various geologic strata occurring at basin margins and along geologic structures. Cross-formational movement of brines is also seen in the northern part of the basin. The maps and cross sections also show barriers to groundwater movement created by aquitards resulting in areas of apparent isolation/stagnation of concentrated brines within the basin. The distribution of Cl - within the Illinois Basin suggests that the current chemical composition of groundwater and distribution of brines within the basin is dependent on five parameters: (1) presence of bedrock exposures along basin margins; (2) permeability of geologic strata and their distribution relative to one another; (3) presence or absence of major geologic structures; (4) intersection of major waterways with geologic structures, basin margins, and permeable bedrock exposures; and (5) isolation of brines within the basin due to aquitards, inhomogeneous permeability, and, in the case of the deepest part of the basin, brine density effects. © 2017, National Ground Water Association.

New Classification of Impact Basins and Its Implications for Basin Evolution on the Moon

NASA Astrophysics Data System (ADS)

Ji, J.; Liu, J.; Guo, D.

2016-12-01

Large impact basins, the comprehensive results of internal and external dynamic geological processes, are the principal topographic features on the Moon. Study on evolution of those large impact basins provides important clues for understanding early history of the Moon. However, to classify the impact basins before anyone can link their characteristics to basin evolution, discrepancies occur among different classification systems, of which some did not to consider the effect of filled basalt [1] or some did not to consider the category of non-mascon basins [2, 3]. In order to clarify the ambiguous basin types caused by different classifications, we re-examined impact basins ≥ 200 km in diameter (66 in total; excluding SPA basin) using the GRAIL geophysical data, LRO DEM data and LP geochemical data from NASA Planetary Data System. We chose two major category labels: mascon or not [1, 2, 3] and the basin floor is covered by basalt/basaltic materials or not [4, 5]; plus, we considered topographic signatures as the clue of timescale. As a result, the 66 impact basins were classified into four categories: Type I (20), mascon basins with basalt or basaltic materials and most of them show well-preserved topography signature; Type II (28), mascon basins without basalt or basaltic materials, most of them are located on the farside with preserved topography signature; Type III (11), non-mascon basins with basalt or basaltic materials, most basins of this type are dated as Pre-Nectarian except for Van de Graaff basin and showing severely degraded topography; Type IV (6), non-mascon basins without basalt or basaltic materials, all basins of this type are dated as Pre-Nectarian with severely degraded topography. This new classification scheme can be easily applied to various lunar basins and help us to locate important information about early environment or thermal state of the Moon by comparison study of regional geological evolution of different basin types. References [1] N. Noriyuki N et al., 2009, Science 323(5916) . [2] P. S. Mohit and R. J. Phillips, 2006, J. Geophys. Res. 111(E12001). [3] A. J. Dombard et al., 2013, Geophys. Res. Lett. 40(1).[4] J. Arkani-Hamed, 1998, J. Geophys. Res. 103(E2).[5] G. A. Neumann et al., 1996, J. Geophys. Res 101(E7).

Drainage areas of the Twelvepole Creek basin, West Virginia; Big Sandy River basin, West Virginia; Tug Fork basin, Virginia, Kentucky, West Virginia

USGS Publications Warehouse

Wilson, M.W.

1979-01-01

Drainage areas were determined for 61 basins in the Twelvepole Creek basin, West Virginia; 11 basins of the Big Sandy River Basin, West Virginia; and 210 basins in the Tug Fork basin of Virginia, Kentucky, and West Virginia. Most basins with areas greater than 5 square miles were included. Drainage areas were measured with electronic digitizing equipment, and supplementary measurements were made with a hand planimeter. Stream mileages were determined by measuring, with a graduated plastic strip, distances from the mouth of each stream to the measuring point on that stream. Mileages were reported to the nearest one-hundredth of a mile in all cases. The latitude and longitude of each measuring point was determined with electronic digitizing equipment and is reported to the nearest second. The information is listed in tabular form in downstream order. Measuring points for the basins are located in the tables by intersecting tributaries, by counties, by map quadrangles, or by latitude and longitude. (Woodard-USGS)

Contrasting basin architecture and rifting style of the Vøring Basin, offshore mid-Norway and the Faroe-Shetland Basin, offshore United Kingdom

NASA Astrophysics Data System (ADS)

Schöpfer, Kateřina; Hinsch, Ralph

2017-04-01

The Vøring and the Faroe-Shetland basins are offshore deep sedimentary basins which are situated on the outer continental margin of the northeast Atlantic Ocean. Both basins are underlain by thinned continental crust whose structure is still debated. In particular the nature of the lower continental crust and the origin of high velocity bodies located at the base of the lower crust are a subject of discussion in recent literature. Regional interpretation of 2D and 3D seismic reflection data, combined with well data, suggest that both basins share several common features: (i) Pre-Cretaceous faults that are distributed across the entire basin width. (ii) Geometries of pre-Jurassic strata reflecting at least two extensional phases. (iii) Three common rift phases, Late Jurassic, Campanian-Maastrichtian and Palaeocene. (iv) Large pre-Cretaceous fault blocks that are buried by several kilometres of Cretaceous and Cenozoic strata. (iii). (v) Latest Cretaceous/Palaeocene inversion. (vi) Occurrence of partial mantle serpentinization during Early Cretaceous times, as proposed by other studies, seems improbable. The detailed analysis of the data, however, revealed significant differences between the two basins: (i) The Faroe-Shetland Basin was a fault-controlled basin during the Late Jurassic but also the Late Cretaceous extensional phase. In contrast, the Vøring Basin is dominated by the late Jurassic rifting and subsequent thermal subsidence. It exhibits only minor Late Cretaceous faults that are localised above intra-basinal and marginal highs. In addition, the Cretaceous strata in the Vøring Basin are folded. (ii) In the Vøring Basin, the locus of Late Cretaceous rifting shifted westwards, affecting mainly the western basin margin, whereas in the Faroe-Shetland Basin Late Cretaceous rifting was localised in the same area as the Late Jurassic phase, hence masking the original Jurassic geometries. (iii) Devono-Carboniferous and Aptian/Albian to Cenomanian rift phases are present in the Faroe-Shetland Basin, but are not recognisable in the Vøring Basin. (iv) Based on seismic data only, a Permian/Triassic rift phase can be suggested for the Vøring Basin, but the evidence for an equivalent rift phase in the Faroe-Shetland Basin is inconclusive. The present study demonstrates that basins developing above a complex mosaic of basement terrains accreted during orogenic phases can exhibit significant differences in their architecture. The origin of these differences may be considered to be a result of inherited pre-existing large-scale structures (e.g. pre-existing fault blocks) and/or a non-uniform crustal thickness prior to rifting.

Sediment-hosted micro-disseminated gold mineralization constrained by basin paleo-topographic highs in the Youjiang basin, South China

NASA Astrophysics Data System (ADS)

Liu, Jianming; Ye, Jie; Ying, Hanlong; Liu, Jiajun; Zheng, Minghua; Gu, Xuexiang

2002-06-01

The Youjiang basin is a Devonian-Triassic rift basin on the southern margin of the Yangtze Craton in South China. Strong syndepositional faulting defined the basin-and-range style paleo-topography that further developed into isolated carbonate platforms surrounded by siliciclastic filled depressions. Finally, thick Triassic siliciclastic deposits covered the platforms completely. In the Youjiang basin, numerous sediment-hosted, micro-disseminated gold (SMG) deposits occur mainly in Permian-Triassic chert and siliciclastic rocks. SMG ores are often auriferous sedimentary rocks with relatively low sulfide contents and moderate to weak alteration. Similar to Carlin-type gold ores in North America, SMG ores in the Youjiang basin are characterized by low-temperature mineral assemblages of pyrite, arsenopyrite, realgar, stibnite, cinnabar, marcasite, chalcedony and carbonate. Most of the SMG deposits are remarkably distributed around the carbonate platforms. Accordingly, there are platform-proximal and platform-distal SMG deposits. Platform-proximal SMG deposits often occur in the facies transition zone between the underlying platform carbonate rocks and the overlying siliciclastic rocks with an unconformity (often a paleo-karst surface) in between. In the ores and hostrocks there are abundant synsedimentary-syndiagenetic fabrics such as lamination, convolute bedding, slump texture, soft-sediment deformation etc. indicating submarine hydrothermal deposition and syndepositional faulting. Numerous fluid-escape and liquefaction fabrics imply strong fluid migration during sediment basin evolution. Such large-scale geological and fabric evidence implies that SMG ores were formed during basin evolution, probably in connection with basinal fluids. It is well known that basinal fluids (especially sediment-sourced fluids) will migrate generally (1) upwards, (2) towards basin margins or basin topographic highs, (3) and from thicker towards thinner deposits during basin evolution. The isolated carbonate platform (as a basin paleo-high) and related syndepositional fault system, together with the unconformity-related facies succession, may have controlled the migration pathway of ore-forming basinal fluids and subsequently determined the location of SMG deposits in the Youjiang basin. Unlike Carlin-type gold deposits, SMG mineralization in the Youjiang basin may represent an integral aspect of the dynamic evolution of extensional basins along divergent continental margins.

Latest Cretaceous-Paleogene basin development and resultant sedimentation patterns in the thrust belt and broken foreland of central Utah

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lawton, T.F.; Franczyk, K.J.; Pitman, J.K.

1990-05-01

Latest Cretaceous tectonism in central and east-central Utah formed several intermontane basins both atop thrust sheets and between the thrust front and basement-involved uplifts in the former foreland basin. The upper Campanian Castlegate Sandstone and its inferred western equivalents were the last strata deposited prior to segmentation of the foreland basin. Thereafter, eastward transport of the thrust allochthon uplifted the most proximal part of the Castlegate depositional wedge. West of the thrust front, small intermontane basins formed on the allochthon. Sediment was transported into these basins from both eastern and western sources. In each basin, facies grade from basin-margin conglomeraticmore » alluvial fan deposits to basin-interior flood-plain and lacustrine deposits within a few kilometers. These intermontane basins existed from latest Campanian through the late Paleocene, and may have been transported a short distance eastward as they formed. East of the thrust front in the latest Campanian and contemporaneous with basin formation on the allochthon, a northward-northeastward-flowing big river system transported sediment into the foreland basin from feldspar-rich source areas southwest of the study area. Subsequently, major movement of the San Rafael uplift in the very late Campanian or early Maastrichtian gave rise to an intermontane basin between the thrust front and the San Rafael uplift. Northwestward-flowing, pebble-bearing braided rivers deposited the oldest sediments in this basin prior to an influx from the south and southwest of sediment that formed a thick Maastrichtian clastic sequence. In contrast to deposition in basins on the allochthon, deposition east of the thrust front in the Paleocene was intermittent and restricted to rapidly shifting centers of basin subsidence.« less