Dynamic multi-coil technique (DYNAMITE) shimming for echo-planar imaging of the human brain at 7 Tesla.

PubMed

Juchem, Christoph; Umesh Rudrapatna, S; Nixon, Terence W; de Graaf, Robin A

2015-01-15

Gradient-echo echo-planar imaging (EPI) is the primary method of choice in functional MRI and other methods relying on fast MRI to image brain activation and connectivity. However, the high susceptibility of EPI towards B0 magnetic field inhomogeneity poses serious challenges. Conventional magnetic field shimming with low-order spherical harmonic (SH) functions is capable of compensating shallow field distortions, but performs poorly for global brain shimming or on specific areas with strong susceptibility-induced B0 distortions such as the prefrontal cortex (PFC). Excellent B0 homogeneity has been demonstrated recently in the human brain at 7 Tesla with the DYNAmic Multi-coIl TEchnique (DYNAMITE) for magnetic field shimming (J Magn Reson (2011) 212:280-288). Here, we report the benefits of DYNAMITE shimming for multi-slice EPI and T2* mapping. A standard deviation of 13Hz was achieved for the residual B0 distribution in the human brain at 7 Tesla with DYNAMITE shimming and was 60% lower compared to conventional shimming that employs static zero through third order SH shapes. The residual field inhomogeneity with SH shimming led to an average 8mm shift at acquisition parameters commonly used for fMRI and was reduced to 1.5-3mm with DYNAMITE shimming. T2* values obtained from the prefrontal and temporal cortices with DYNAMITE shimming were 10-50% longer than those measured with SH shimming. The reduction of the confounding macroscopic B0 field gradients with DYNAMITE shimming thereby promises improved access to the relevant microscopic T2* effects. The combination of high spatial resolution and DYNAMITE shimming allows largely artifact-free EPI and T2* mapping throughout the brain, including prefrontal and temporal lobe areas. DYNAMITE shimming is expected to critically benefit a wide range of MRI applications that rely on excellent B0 magnetic field conditions including EPI-based fMRI to study various cognitive processes and assessing large-scale brain connectivity in vivo. As such, DYNAMITE shimming has the potential to replace conventional SH shim systems in human MR scanners. Copyright © 2014 Elsevier Inc. All rights reserved.

Dynamic Multi-Coil Technique (DYNAMITE) Shimming for Echo-Planar Imaging of the Human Brain at 7 Tesla

PubMed Central

Juchem, Christoph; Rudrapatna, S. Umesh; Nixon, Terence W.; de Graaf, Robin A.

2014-01-01

Gradient-echo echo-planar imaging (EPI) is the primary method of choice in functional MRI and other methods relying on fast MRI to image brain activation and connectivity. However, the high susceptibility of EPI towards B0 magnetic field inhomogeneity poses serious challenges. Conventional magnetic field shimming with low-order spherical harmonic (SH) functions is capable of compensating shallow field distortions, but performs poorly for global brain shimming or on specific areas with strong susceptibility-induced B0 distortions such as the prefrontal cortex (PFC). Excellent B0 homogeneity has been demonstrated recently in the human brain at 7 Tesla with the DYNAmic Multi-coIl TEchnique (DYNAMITE) for magnetic field shimming (Juchem et al., J Magn Reson (2011) 212:280-288). Here, we report the benefits of DYNAMITE shimming for multi-slice EPI and T2* mapping. A standard deviation of 13 Hz was achieved for the residual B0 distribution in the human brain at 7 Tesla with DYNAMITE shimming and was 60% lower compared to conventional shimming that employs static zero through third order SH shapes. The residual field inhomogeneity with SH shimming led to an average 8 mm shift at acquisition parameters commonly used for fMRI and was reduced to 1.5-3 mm with DYNAMITE shimming. T2* values obtained from the prefrontal and temporal cortices with DYNAMITE shimming were 10-50% longer than those measured with SH shimming. The reduction of the confounding macroscopic B0 field gradients with DYNAMITE shimming thereby promises improved access to the relevant microscopic T2* effects. The combination of high spatial resolution and DYNAMITE shimming allows largely artifact-free EPI and T2* mapping throughout the brain, including prefrontal and temporal lobe areas. DYNAMITE shimming is expected to critically benefit a wide range of MRI applications that rely on excellent B0 magnetic field conditions including EPI-based fMRI to study various cognitive processes and assessing large-scale brain connectivity in vivo. As such, DYNAMITE shimming has the potential to replace conventional SH shim systems in human MR scanners. PMID:25462795

A 2500 deg 2 CMB Lensing Map from Combined South Pole Telescope and Planck Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Omori, Y.; Chown, R.; Simard, G.

We present a cosmic microwave background (CMB) lensing map produced from a linear combination of South Pole Telescope (SPT) and \\emph{Planck} temperature data. The 150 GHz temperature data from themore » $$2500\\ {\\rm deg}^{2}$$ SPT-SZ survey is combined with the \\emph{Planck} 143 GHz data in harmonic space, to obtain a temperature map that has a broader $$\\ell$$ coverage and less noise than either individual map. Using a quadratic estimator technique on this combined temperature map, we produce a map of the gravitational lensing potential projected along the line of sight. We measure the auto-spectrum of the lensing potential $$C_{L}^{\\phi\\phi}$$, and compare it to the theoretical prediction for a $$\\Lambda$$CDM cosmology consistent with the \\emph{Planck} 2015 data set, finding a best-fit amplitude of $$0.95_{-0.06}^{+0.06}({\\rm Stat.})\\! _{-0.01}^{+0.01}({\\rm Sys.})$$. The null hypothesis of no lensing is rejected at a significance of $$24\\,\\sigma$$. One important use of such a lensing potential map is in cross-correlations with other dark matter tracers. We demonstrate this cross-correlation in practice by calculating the cross-spectrum, $$C_{L}^{\\phi G}$$, between the SPT+\\emph{Planck} lensing map and Wide-field Infrared Survey Explorer (\\emph{WISE}) galaxies. We fit $$C_{L}^{\\phi G}$$ to a power law of the form $$p_{L}=a(L/L_{0})^{-b}$$ with $$a=2.15 \\times 10^{-8}$$, $b=1.35$, $$L_{0}=490$$, and find $$\\eta^{\\phi G}=0.94^{+0.04}_{-0.04}$$, which is marginally lower, but in good agreement with $$\\eta^{\\phi G}=1.00^{+0.02}_{-0.01}$$, the best-fit amplitude for the cross-correlation of \\emph{Planck}-2015 CMB lensing and \\emph{WISE} galaxies over $$\\sim67\\%$$ of the sky. The lensing potential map presented here will be used for cross-correlation studies with the Dark Energy Survey (DES), whose footprint nearly completely covers the SPT $$2500\\ {\\rm deg}^2$$ field.« less

A 2500 deg 2 CMB Lensing Map from Combined South Pole Telescope and Planck Data

DOE PAGES

Omori, Y.; Chown, R.; Simard, G.; ...

2017-11-07

We present a cosmic microwave background (CMB) lensing map produced from a linear combination of South Pole Telescope (SPT) and \\emph{Planck} temperature data. The 150 GHz temperature data from themore » $$2500\\ {\\rm deg}^{2}$$ SPT-SZ survey is combined with the \\emph{Planck} 143 GHz data in harmonic space, to obtain a temperature map that has a broader $$\\ell$$ coverage and less noise than either individual map. Using a quadratic estimator technique on this combined temperature map, we produce a map of the gravitational lensing potential projected along the line of sight. We measure the auto-spectrum of the lensing potential $$C_{L}^{\\phi\\phi}$$, and compare it to the theoretical prediction for a $$\\Lambda$$CDM cosmology consistent with the \\emph{Planck} 2015 data set, finding a best-fit amplitude of $$0.95_{-0.06}^{+0.06}({\\rm Stat.})\\! _{-0.01}^{+0.01}({\\rm Sys.})$$. The null hypothesis of no lensing is rejected at a significance of $$24\\,\\sigma$$. One important use of such a lensing potential map is in cross-correlations with other dark matter tracers. We demonstrate this cross-correlation in practice by calculating the cross-spectrum, $$C_{L}^{\\phi G}$$, between the SPT+\\emph{Planck} lensing map and Wide-field Infrared Survey Explorer (\\emph{WISE}) galaxies. We fit $$C_{L}^{\\phi G}$$ to a power law of the form $$p_{L}=a(L/L_{0})^{-b}$$ with $$a=2.15 \\times 10^{-8}$$, $b=1.35$, $$L_{0}=490$$, and find $$\\eta^{\\phi G}=0.94^{+0.04}_{-0.04}$$, which is marginally lower, but in good agreement with $$\\eta^{\\phi G}=1.00^{+0.02}_{-0.01}$$, the best-fit amplitude for the cross-correlation of \\emph{Planck}-2015 CMB lensing and \\emph{WISE} galaxies over $$\\sim67\\%$$ of the sky. The lensing potential map presented here will be used for cross-correlation studies with the Dark Energy Survey (DES), whose footprint nearly completely covers the SPT $$2500\\ {\\rm deg}^2$$ field.« less

In-vitro mapping of E-fields induced near pacemaker leads by simulated MR gradient fields

PubMed Central

2009-01-01

Background Magnetic resonance imaging (MRI) of patients with implanted cardiac pacemakers is generally contraindicated but some clinicians condone scanning certain patients. We assessed the risk of inducing unintended cardiac stimulation by measuring electric fields (E) induced near lead tips by a simulated MRI gradient system. The objectives of this study are to map magnetically induced E near distal tips of leads in a saline tank to determine the spatial distribution and magnitude of E and compare them with E induced by a pacemaker pulse generator (PG). Methods We mapped magnetically induced E with 0.1 mm resolution as close as 1 mm from lead tips. We used probes with two straight electrodes (e.g. wire diameter of 0.2 mm separated by 0.9 mm). We generated magnetic flux density (B) with a Helmholtz coil throughout 0.6% saline in a 24 cm diameter tank with (dB/dt) of 1 T/sec (1 kHz sinusoidal waveform). Separately, we measured E near the tip of leads when connected to a PG set to a unipolar mode. Measurements were non-invasive (not altering the leads or PG under study). Results When scaled to 30 T/s (a clinically relevant value), magnetically-induced E exceeded the E produced by a PG. The magnetically-induced E only occurred when B was coincident with or within 15 msec of implantable pacemaker's pulse. Conclusions Potentially hazardous situations are possible during an MR scan due to gradient fields. Unintended stimulation can be induced via abandoned leads and leads connected to a pulse generator with loss of hermetic seal at the connector. Also, pacemaker-dependent patients can receive drastically altered pacing pulses. PMID:20003479

Accelerating parallel transmit array B1 mapping in high field MRI with slice undersampling and interpolation by kriging.

PubMed

Ferrand, Guillaume; Luong, Michel; Cloos, Martijn A; Amadon, Alexis; Wackernagel, Hans

2014-08-01

Transmit arrays have been developed to mitigate the RF field inhomogeneity commonly observed in high field magnetic resonance imaging (MRI), typically above 3T. To this end, the knowledge of the RF complex-valued B1 transmit-sensitivities of each independent radiating element has become essential. This paper details a method to speed up a currently available B1-calibration method. The principle relies on slice undersampling, slice and channel interleaving and kriging, an interpolation method developed in geostatistics and applicable in many domains. It has been demonstrated that, under certain conditions, kriging gives the best estimator of a field in a region of interest. The resulting accelerated sequence allows mapping a complete set of eight volumetric field maps of the human head in about 1 min. For validation, the accuracy of kriging is first evaluated against a well-known interpolation technique based on Fourier transform as well as to a B1-maps interpolation method presented in the literature. This analysis is carried out on simulated and decimated experimental B1 maps. Finally, the accelerated sequence is compared to the standard sequence on a phantom and a volunteer. The new sequence provides B1 maps three times faster with a loss of accuracy limited potentially to about 5%.

MR-compatibility of a high-resolution small animal PET insert operating inside a 7 T MRI.

PubMed

Thiessen, J D; Shams, E; Stortz, G; Schellenberg, G; Bishop, D; Khan, M S; Kozlowski, P; Retière, F; Sossi, V; Thompson, C J; Goertzen, A L

2016-11-21

A full-ring PET insert consisting of 16 PET detector modules was designed and constructed to fit within the 114 mm diameter gradient bore of a Bruker 7 T MRI. The individual detector modules contain two silicon photomultiplier (SiPM) arrays, dual-layer offset LYSO crystal arrays, and high-definition multimedia interface (HDMI) cables for both signal and power transmission. Several different RF shielding configurations were assessed prior to construction of a fully assembled PET insert using a combination of carbon fibre and copper foil for RF shielding. MR-compatibility measurements included field mapping of the static magnetic field (B 0 ) and the time-varying excitation field (B 1 ) as well as acquisitions with multiple pulse sequences: spin echo (SE), rapid imaging with refocused echoes (RARE), fast low angle shot (FLASH) gradient echo, and echo planar imaging (EPI). B 0 field maps revealed a small degradation in the mean homogeneity (+0.1 ppm) when the PET insert was installed and operating. No significant change was observed in the B 1 field maps or the image homogeneity of various MR images, with a 9% decrease in the signal-to-noise ratio (SNR) observed only in EPI images acquired with the PET insert installed and operating. PET detector flood histograms, photopeak amplitudes, and energy resolutions were unchanged in individual PET detector modules when acquired during MRI operation. There was a small baseline shift on the PET detector signals due to the switching amplifiers used to power MRI gradient pulses. This baseline shift was observable when measured with an oscilloscope and varied as a function of the gradient duty cycle, but had no noticeable effect on the performance of the PET detector modules. Compact front-end electronics and effective RF shielding led to minimal cross-interference between the PET and MRI systems. Both PET detector and MRI performance was excellent, whether operating as a standalone system or a hybrid PET/MRI.

MR-compatibility of a high-resolution small animal PET insert operating inside a 7 T MRI

NASA Astrophysics Data System (ADS)

Thiessen, J. D.; Shams, E.; Stortz, G.; Schellenberg, G.; Bishop, D.; Khan, M. S.; Kozlowski, P.; Retière, F.; Sossi, V.; Thompson, C. J.; Goertzen, A. L.

2016-11-01

A full-ring PET insert consisting of 16 PET detector modules was designed and constructed to fit within the 114 mm diameter gradient bore of a Bruker 7 T MRI. The individual detector modules contain two silicon photomultiplier (SiPM) arrays, dual-layer offset LYSO crystal arrays, and high-definition multimedia interface (HDMI) cables for both signal and power transmission. Several different RF shielding configurations were assessed prior to construction of a fully assembled PET insert using a combination of carbon fibre and copper foil for RF shielding. MR-compatibility measurements included field mapping of the static magnetic field (B 0) and the time-varying excitation field (B 1) as well as acquisitions with multiple pulse sequences: spin echo (SE), rapid imaging with refocused echoes (RARE), fast low angle shot (FLASH) gradient echo, and echo planar imaging (EPI). B 0 field maps revealed a small degradation in the mean homogeneity (+0.1 ppm) when the PET insert was installed and operating. No significant change was observed in the B 1 field maps or the image homogeneity of various MR images, with a 9% decrease in the signal-to-noise ratio (SNR) observed only in EPI images acquired with the PET insert installed and operating. PET detector flood histograms, photopeak amplitudes, and energy resolutions were unchanged in individual PET detector modules when acquired during MRI operation. There was a small baseline shift on the PET detector signals due to the switching amplifiers used to power MRI gradient pulses. This baseline shift was observable when measured with an oscilloscope and varied as a function of the gradient duty cycle, but had no noticeable effect on the performance of the PET detector modules. Compact front-end electronics and effective RF shielding led to minimal cross-interference between the PET and MRI systems. Both PET detector and MRI performance was excellent, whether operating as a standalone system or a hybrid PET/MRI.

Dynamic and Inherent B0 Correction for DTI Using Stimulated Echo Spiral Imaging

PubMed Central

Avram, Alexandru V.; Guidon, Arnaud; Truong, Trong-Kha; Liu, Chunlei; Song, Allen W.

2013-01-01

Purpose To present a novel technique for high-resolution stimulated echo (STE) diffusion tensor imaging (DTI) with self-navigated interleaved spirals (SNAILS) readout trajectories that can inherently and dynamically correct for image artifacts due to spatial and temporal variations in the static magnetic field (B0) resulting from eddy currents, tissue susceptibilities, subject/physiological motion, and hardware instabilities. Methods The Hahn spin echo formed by the first two 90° radio-frequency pulses is balanced to consecutively acquire two additional images with different echo times (TE) and generate an inherent field map, while the diffusion-prepared STE signal remains unaffected. For every diffusion-encoding direction, an intrinsically registered field map is estimated dynamically and used to effectively and inherently correct for off-resonance artifacts in the reconstruction of the corresponding diffusion-weighted image (DWI). Results After correction with the dynamically acquired field maps, local blurring artifacts are specifically removed from individual STE DWIs and the estimated diffusion tensors have significantly improved spatial accuracy and larger fractional anisotropy. Conclusion Combined with the SNAILS acquisition scheme, our new method provides an integrated high-resolution short-TE DTI solution with inherent and dynamic correction for both motion-induced phase errors and off-resonance effects. PMID:23630029

Threshold and variability properties of matrix frequency-doubling technology and standard automated perimetry in glaucoma.

PubMed

Artes, Paul H; Hutchison, Donna M; Nicolela, Marcelo T; LeBlanc, Raymond P; Chauhan, Balwantray C

2005-07-01

To compare test results from second-generation Frequency-Doubling Technology perimetry (FDT2, Humphrey Matrix; Carl-Zeiss Meditec, Dublin, CA) and standard automated perimetry (SAP) in patients with glaucoma. Specifically, to examine the relationship between visual field sensitivity and test-retest variability and to compare total and pattern deviation probability maps between both techniques. Fifteen patients with glaucoma who had early to moderately advanced visual field loss with SAP (mean MD, -4.0 dB; range, +0.2 to -16.1) were enrolled in the study. Patients attended three sessions. During each session, one eye was examined twice with FDT2 (24-2 threshold test) and twice with SAP (Swedish Interactive Threshold Algorithm [SITA] Standard 24-2 test), in random order. We compared threshold values between FDT2 and SAP at test locations with similar visual field coordinates. Test-retest variability, established in terms of test-retest intervals and standard deviations (SDs), was investigated as a function of visual field sensitivity (estimated by baseline threshold and mean threshold, respectively). The magnitude of visual field defects apparent in total and pattern deviation probability maps were compared between both techniques by ordinal scoring. The global visual field indices mean deviation (MD) and pattern standard deviation (PSD) of FDT2 and SAP correlated highly (r > 0.8; P < 0.001). At test locations with high sensitivity (>25 dB with SAP), threshold estimates from FDT2 and SAP exhibited a close, linear relationship, with a slope of approximately 2.0. However, at test locations with lower sensitivity, the relationship was much weaker and ceased to be linear. In comparison with FDT2, SAP showed a slightly larger proportion of test locations with absolute defects (3.0% vs. 2.2% with SAP and FDT2, respectively, P < 0.001). Whereas SAP showed a significant increase in test-retest variability at test locations with lower sensitivity (P < 0.001), there was no relationship between variability and sensitivity with FDT2 (P = 0.46). In comparison with SAP, FDT2 exhibited narrower test-retest intervals at test locations with lower sensitivity (SAP thresholds <25 dB). A comparison of the total and pattern deviation maps between both techniques showed that the total deviation analyses of FDT2 may slightly underestimate the visual field loss apparent with SAP. However, the pattern-deviation maps of both instruments agreed well with each other. The test-retest variability of FDT2 is uniform over the measurement range of the instrument. These properties may provide advantages for the monitoring of patients with glaucoma that should be investigated in longitudinal studies.

Fast conjugate phase image reconstruction based on a Chebyshev approximation to correct for B0 field inhomogeneity and concomitant gradients.

PubMed

Chen, Weitian; Sica, Christopher T; Meyer, Craig H

2008-11-01

Off-resonance effects can cause image blurring in spiral scanning and various forms of image degradation in other MRI methods. Off-resonance effects can be caused by both B0 inhomogeneity and concomitant gradient fields. Previously developed off-resonance correction methods focus on the correction of a single source of off-resonance. This work introduces a computationally efficient method of correcting for B0 inhomogeneity and concomitant gradients simultaneously. The method is a fast alternative to conjugate phase reconstruction, with the off-resonance phase term approximated by Chebyshev polynomials. The proposed algorithm is well suited for semiautomatic off-resonance correction, which works well even with an inaccurate or low-resolution field map. The proposed algorithm is demonstrated using phantom and in vivo data sets acquired by spiral scanning. Semiautomatic off-resonance correction alone is shown to provide a moderate amount of correction for concomitant gradient field effects, in addition to B0 imhomogeneity effects. However, better correction is provided by the proposed combined method. The best results were produced using the semiautomatic version of the proposed combined method.

UVMAS: Venus ultraviolet-visual mapping spectrometer

NASA Astrophysics Data System (ADS)

Bellucci, G.; Zasova, L.; Altieri, F.; Nuccilli, F.; Ignatiev, N.; Moroz, V.; Khatuntsev, I.; Korablev, O.; Rodin, A.

This paper summarizes the capabilities and technical solutions of an Ultraviolet Visual Mapping Spectrometer designed for remote sensing of Venus from a planetary orbiter. The UVMAS consists of a multichannel camera with a spectral range 0.19 << 0.49 μm which acquires data in several spectral channels (up to 400) with a spectral resolution of 0.58 nm. The instantaneous field of view of the instrument is 0.244 × 0.244 mrad. These characteristics allow: a) to study the upper clouds dynamics and chemistry; b) giving constraints on the unknown absorber; c) observation of the night side airglow.

Polarization Properties and Magnetic Field Structures in the High-mass Star-forming Region W51 Observed with ALMA

NASA Astrophysics Data System (ADS)

Koch, Patrick M.; Tang, Ya-Wen; Ho, Paul T. P.; Yen, Hsi-Wei; Su, Yu-Nung; Takakuwa, Shigehisa

2018-03-01

We present the first ALMA dust polarization observations toward the high-mass star-forming regions W51 e2, e8, and W51 North in Band 6 (230 GHz) with a resolution of about 0\\buildrel{\\prime\\prime}\\over{.} 26 (∼5 mpc). Polarized emission in all three sources is clearly detected and resolved. Measured relative polarization levels are between 0.1% and 10%. While the absolute polarization shows complicated structures, the relative polarization displays the typical anticorrelation with Stokes I, although with a large scatter. Inferred magnetic (B) field morphologies are organized and connected. Detailed substructures are resolved, revealing new features such as comet-shaped B-field morphologies in satellite cores, symmetrically converging B-field zones, and possibly streamlined morphologies. The local B-field dispersion shows some anticorrelation with the relative polarization. Moreover, the lowest polarization percentages together with largest dispersions coincide with B-field convergence zones. We put forward \\sin ω , where ω is the measurable angle between a local B-field orientation and local gravity, as a measure of how effectively the B field can oppose gravity. Maps of \\sin ω for all three sources show organized structures that suggest a locally varying role of the B field, with some regions where gravity can largely act unaffectedly, possibly in a network of narrow magnetic channels, and other regions where the B field can work maximally against gravity.

Simultaneous MR quantification of hepatic fat content, fatty acid composition, transverse relaxation time and magnetic susceptibility for the diagnosis of non-alcoholic steatohepatitis.

PubMed

Leporq, B; Lambert, S A; Ronot, M; Vilgrain, V; Van Beers, B E

2017-10-01

Non-alcoholic steatohepatitis (NASH) is characterized at histology by steatosis, hepatocyte ballooning and inflammatory infiltrates, with or without fibrosis. Although diamagnetic material in fibrosis and inflammation can be detected with quantitative susceptibility imaging, fatty acid composition changes in NASH relative to simple steatosis have also been reported. Therefore, our aim was to develop a single magnetic resonance (MR) acquisition and post-processing scheme for the diagnosis of steatohepatitis by the simultaneous quantification of hepatic fat content, fatty acid composition, T 2 * transverse relaxation time and magnetic susceptibility in patients with non-alcoholic fatty liver disease. MR acquisition was performed at 3.0 T using a three-dimensional, multi-echo, spoiled gradient echo sequence. Phase images were unwrapped to compute the B 0 field inhomogeneity (ΔB 0 ) map. The ΔB 0 -demodulated real part images were used for fat-water separation, T 2 * and fatty acid composition quantification. The external and internal fields were separated with the projection onto dipole field method. Susceptibility maps were obtained after dipole inversion from the internal field map with single-orientation Bayesian regularization including spatial priors. Method validation was performed in 32 patients with biopsy-proven, non-alcoholic fatty liver disease from which 12 had simple steatosis and 20 NASH. Liver fat fraction and T 2 * did not change significantly between patients with simple steatosis and NASH. In contrast, the saturated fatty acid fraction increased in patients with NASH relative to patients with simple steatosis (48 ± 2% versus 44 ± 4%; p < 0.05) and the magnetic susceptibility decreased (-0.30 ± 0.27 ppm versus 0.10 ± 0.14 ppm; p < 0.001). The area under the receiver operating characteristic curve for magnetic susceptibility as NASH marker was 0.91 (95% CI: 0.79-1.0). Simultaneous MR quantification of fat content, fatty acid composition, T 2 * and magnetic susceptibility is feasible in the liver. Our preliminary results suggest that quantitative susceptibility imaging has a high diagnostic performance for the diagnosis of NASH. Copyright © 2017 John Wiley & Sons, Ltd.

Robust reconstruction of B1 (+) maps by projection into a spherical functions space.

PubMed

Sbrizzi, Alessandro; Hoogduin, Hans; Lagendijk, Jan J; Luijten, Peter; van den Berg, Cornelis A T

2014-01-01

Several parallel transmit MRI techniques require knowledge of the transmit radiofrequency field profiles (B1 (+) ). During the past years, various methods have been developed to acquire this information. Often, these methods suffer from long measurement times and produce maps exhibiting regions with poor signal-to-noise ratio and artifacts. In this article, a model-based reconstruction procedure is introduced that improves the robustness of B1 (+) mapping. The missing information from undersampled B1 (+) maps and the regions of poor signal to noise ratio are reconstructed through projection into the space of spherical functions that arise naturally from the solution of the Helmholtz equations in the spherical coordinate system. As a result, B1 (+) data over a limited range of the field of view/volume is sufficient to reconstruct the B1 (+) over the full spatial domain in a fast and robust way. The same model is exploited to filter the noise of the measured maps. Results from simulations and in vivo measurements confirm the validity of the proposed method. A spherical functions model can well approximate the magnetic fields inside the body with few basis terms. Exploiting this compression capability, B1 (+) maps are reconstructed in regions of unknown or corrupted values. Copyright © 2013 Wiley Periodicals, Inc.

Fast conjugate phase image reconstruction based on a Chebyshev approximation to correct for B0 field inhomogeneity and concomitant gradients

PubMed Central

Chen, Weitian; Sica, Christopher T.; Meyer, Craig H.

2008-01-01

Off-resonance effects can cause image blurring in spiral scanning and various forms of image degradation in other MRI methods. Off-resonance effects can be caused by both B0 inhomogeneity and concomitant gradient fields. Previously developed off-resonance correction methods focus on the correction of a single source of off-resonance. This work introduces a computationally efficient method of correcting for B0 inhomogeneity and concomitant gradients simultaneously. The method is a fast alternative to conjugate phase reconstruction, with the off-resonance phase term approximated by Chebyshev polynomials. The proposed algorithm is well suited for semiautomatic off-resonance correction, which works well even with an inaccurate or low-resolution field map. The proposed algorithm is demonstrated using phantom and in vivo data sets acquired by spiral scanning. Semiautomatic off-resonance correction alone is shown to provide a moderate amount of correction for concomitant gradient field effects, in addition to B0 imhomogeneity effects. However, better correction is provided by the proposed combined method. The best results were produced using the semiautomatic version of the proposed combined method. PMID:18956462

Remote sensing for mapping soil moisture and drainage potential in semi-arid regions: Applications to the Campidano plain of Sardinia, Italy.

PubMed

Filion, Rébecca; Bernier, Monique; Paniconi, Claudio; Chokmani, Karem; Melis, Massimo; Soddu, Antonino; Talazac, Manon; Lafortune, Francois-Xavier

2016-02-01

The aim of this study is to investigate the potential of radar (ENVISAT ASAR and RADARSAT-2) and LANDSAT data to generate reliable soil moisture maps to support water management and agricultural practice in Mediterranean regions, particularly during dry seasons. The study is based on extensive field surveys conducted from 2005 to 2009 in the Campidano plain of Sardinia, Italy. A total of 12 small bare soil fields were sampled for moisture, surface roughness, and texture values. From field scale analysis with ENVISAT ASAR (C-band, VV polarized, descending mode, incidence angle from 15.0° to 31.4°), an empirical model for estimating bare soil moisture was established, with a coefficient of determination (R(2)) of 0.85. LANDSAT TM5 images were also used for soil moisture estimation using the TVX slope (temperature/vegetation index), and in this case the best linear relationship had an R(2) of 0.81. A cross-validation on the two empirical models demonstrated the potential of C-band SAR data for estimation of surface moisture, with and R(2) of 0.76 (bias +0.3% and RMSE 7%) for ENVISAT ASAR and 0.54 (bias +1.3% and RMSE 5%) for LANDSAT TM5. The two models developed at plot level were then applied over the Campidano plain and assessed via multitemporal and spatial analyses, in the latter case against soil permeability data from a pedological map of Sardinia. Encouraging estimated soil moisture (ESM) maps were obtained for the SAR-based model, whereas the LANDSAT-based model would require a better field data set for validation, including ground data collected on vegetated fields. ESM maps showed sensitivity to soil drainage qualities or drainage potential, which could be useful in irrigation management and other agricultural applications. Copyright © 2015 Elsevier B.V. All rights reserved.

Quantitative assessment of biliary stent artifacts on MR images: Potential implications for target delineation in radiotherapy.

PubMed

Gurney-Champion, Oliver J; Bruins Slot, Thijs; Lens, Eelco; van der Horst, Astrid; Klaassen, Remy; van Laarhoven, Hanneke W M; van Tienhoven, Geertjan; van Hooft, Jeanin E; Nederveen, Aart J; Bel, Arjan

2016-10-01

Biliary stents may cause susceptibility artifacts, gradient-induced artifacts, and radio frequency (RF) induced artifacts on magnetic resonance images, which can hinder accurate target volume delineation in radiotherapy. In this study, the authors investigated and quantified the magnitude of these artifacts for stents of different materials. Eight biliary stents made of nitinol, platinum-cored nitinol, stainless steel, or polyethylene from seven vendors, with different lengths (57-98 mm) and diameters (3.0-11.7 mm), were placed in a phantom. To quantify the susceptibility artifacts sequence-independently, ΔB0-maps and T2 ∗ -maps were acquired at 1.5 and 3 T. To study the effect of the gradient-induced artifacts at 3 T, signal decay in images obtained with maximum readout gradient-induced artifacts was compared to signal decay in reference scans. To quantify the RF induced artifacts at 3 T, B1-maps were acquired. Finally, ΔB0-maps and T2 ∗ -maps were acquired at 3 T of two pancreatic cancer patients who had received platinum-cored nitinol biliary stents. Outside the stent, susceptibility artifacts dominated the other artifacts. The stainless steel stent produced the largest susceptibility artifacts. The other stents caused decreased T2 ∗ up to 5.1 mm (1.5 T) and 8.5 mm (3 T) from the edge of the stent. For sequences with a higher bandwidth per voxel (1.5 T: BW vox > 275 Hz/voxel; 3 T: BW vox > 500 Hz/voxel), the B0-related susceptibility artifacts were negligible (<0.2 voxels). The polyethylene stent showed no artifacts. In vivo, the changes in B0 and T2 ∗ induced by the stent were larger than typical variations in B0 and T2 ∗ induced by anatomy when the stent was at an angle of 30° with the main magnetic field. Susceptibility artifacts were dominating over the other artifacts. The magnitudes of the susceptibility artifacts were determined sequence-independently. This method allows to include additional safety margins that ensure target irradiation.

MR-based field-of-view extension in MR/PET: B0 homogenization using gradient enhancement (HUGE).

PubMed

Blumhagen, Jan O; Ladebeck, Ralf; Fenchel, Matthias; Scheffler, Klaus

2013-10-01

In whole-body MR/PET, the human attenuation correction can be based on the MR data. However, an MR-based field-of-view (FoV) is limited due to physical restrictions such as B0 inhomogeneities and gradient nonlinearities. Therefore, for large patients, the MR image and the attenuation map might be truncated and the attenuation correction might be biased. The aim of this work is to explore extending the MR FoV through B0 homogenization using gradient enhancement in which an optimal readout gradient field is determined to locally compensate B0 inhomogeneities and gradient nonlinearities. A spin-echo-based sequence was developed that computes an optimal gradient for certain regions of interest, for example, the patient's arms. A significant distortion reduction was achieved outside the normal MR-based FoV. This FoV extension was achieved without any hardware modifications. In-plane distortions in a transaxially extended FoV of up to 600 mm were analyzed in phantom studies. In vivo measurements of the patient's arms lying outside the normal specified FoV were compared with and without the use of B0 homogenization using gradient enhancement. In summary, we designed a sequence that provides data for reducing the image distortions due to B0 inhomogeneities and gradient nonlinearities and used the data to extend the MR FoV. Copyright © 2011 Wiley Periodicals, Inc.

Estimating B1+ in the breast at 7 T using a generic template.

PubMed

van Rijssel, Michael J; Pluim, Josien P W; Luijten, Peter R; Gilhuijs, Kenneth G A; Raaijmakers, Alexander J E; Klomp, Dennis W J

2018-05-01

Dynamic contrast-enhanced MRI is the workhorse of breast MRI, where the diagnosis of lesions is largely based on the enhancement curve shape. However, this curve shape is biased by RF transmit (B 1 + ) field inhomogeneities. B 1 + field information is required in order to correct these. The use of a generic, coil-specific B 1 + template is proposed and tested. Finite-difference time-domain simulations for B 1 + were performed for healthy female volunteers with a wide range of breast anatomies. A generic B 1 + template was constructed by averaging simulations based on four volunteers. Three-dimensional B 1 + maps were acquired in 15 other volunteers. Root mean square error (RMSE) metrics were calculated between individual simulations and the template, and between individual measurements and the template. The agreement between the proposed template approach and a B 1 + mapping method was compared against the agreement between acquisition and reacquisition using the same mapping protocol. RMSE values (% of nominal flip angle) comparing individual simulations with the template were in the range 2.00-4.01%, with mean 2.68%. RMSE values comparing individual measurements with the template were in the range8.1-16%, with mean 11.7%. The agreement between the proposed template approach and a B 1 + mapping method was only slightly worse than the agreement between two consecutive acquisitions using the same mapping protocol in one volunteer: the range of agreement increased from ±16% of the nominal angle for repeated measurement to ±22% for the B 1 + template. With local RF transmit coils, intersubject differences in B 1 + fields of the breast are comparable to the accuracy of B 1 + mapping methods, even at 7 T. Consequently, a single generic B 1 + template suits subjects over a wide range of breast anatomies, eliminating the need for a time-consuming B 1 + mapping protocol. © 2018 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd.

Estimating B 1 + in the breast at 7 T using a generic template

PubMed Central

Pluim, Josien P. W.; Luijten, Peter R.; Gilhuijs, Kenneth G. A.; Raaijmakers, Alexander J. E.; Klomp, Dennis W. J.

2018-01-01

Dynamic contrast‐enhanced MRI is the workhorse of breast MRI, where the diagnosis of lesions is largely based on the enhancement curve shape. However, this curve shape is biased by RF transmit (B 1 +) field inhomogeneities. B 1 + field information is required in order to correct these. The use of a generic, coil‐specific B 1 + template is proposed and tested. Finite‐difference time‐domain simulations for B 1 + were performed for healthy female volunteers with a wide range of breast anatomies. A generic B 1 + template was constructed by averaging simulations based on four volunteers. Three‐dimensional B 1 + maps were acquired in 15 other volunteers. Root mean square error (RMSE) metrics were calculated between individual simulations and the template, and between individual measurements and the template. The agreement between the proposed template approach and a B 1 + mapping method was compared against the agreement between acquisition and reacquisition using the same mapping protocol. RMSE values (% of nominal flip angle) comparing individual simulations with the template were in the range 2.00‐4.01%, with mean 2.68%. RMSE values comparing individual measurements with the template were in the range8.1‐16%, with mean 11.7%. The agreement between the proposed template approach and a B 1 + mapping method was only slightly worse than the agreement between two consecutive acquisitions using the same mapping protocol in one volunteer: the range of agreement increased from ±16% of the nominal angle for repeated measurement to ±22% for the B 1 + template. With local RF transmit coils, intersubject differences in B 1 + fields of the breast are comparable to the accuracy of B 1 + mapping methods, even at 7 T. Consequently, a single generic B 1 + template suits subjects over a wide range of breast anatomies, eliminating the need for a time‐consuming B 1 + mapping protocol. PMID:29570887

Calculation of susceptibility through multiple orientation sampling (COSMOS): a method for conditioning the inverse problem from measured magnetic field map to susceptibility source image in MRI.

PubMed

Liu, Tian; Spincemaille, Pascal; de Rochefort, Ludovic; Kressler, Bryan; Wang, Yi

2009-01-01

Magnetic susceptibility differs among tissues based on their contents of iron, calcium, contrast agent, and other molecular compositions. Susceptibility modifies the magnetic field detected in the MR signal phase. The determination of an arbitrary susceptibility distribution from the induced field shifts is a challenging, ill-posed inverse problem. A method called "calculation of susceptibility through multiple orientation sampling" (COSMOS) is proposed to stabilize this inverse problem. The field created by the susceptibility distribution is sampled at multiple orientations with respect to the polarization field, B(0), and the susceptibility map is reconstructed by weighted linear least squares to account for field noise and the signal void region. Numerical simulations and phantom and in vitro imaging validations demonstrated that COSMOS is a stable and precise approach to quantify a susceptibility distribution using MRI.

Initial experience of a novel mapping system combined with remote magnetic navigation in the catheter ablation of atrial fibrillation.

PubMed

Lin, Changjian; Pehrson, Steen; Jacobsen, Peter Karl; Chen, Xu

2017-12-01

There have been advancements of sophisticated mapping systems used for ablation procedures over the last decade. Utilization of these novel mapping systems in combination with remote magnetic navigation (RMN) needs to be established. We investigated the new EnSite Precision mapping system (St. Jude Medical, Inc., St. Paul, MN, USA), which collects magnetic data for checking navigation field stability and is built on an open platform, allowing physicians to choose diagnostic and ablation catheters. We address its compatibility with RMN. To assess the clinical utility of a novel 3D mapping system (EnSite Precision mapping system) combined with RMN (Niobe ES, Stereotaxis, Inc., St. Louis, MO, USA) for atrial fibrillation (AF) ablation. In this prospective nonrandomized study, two groups of patients were treated in our center for drug refractory AF. Patients were consecutively enrolled in each group. Group A (n = 35, 14 persistent AF [PsAF]) was treated using the novel 3D mapping system combined with RMN. Group B (n = 38, 16 PsAF) was treated using Carto ® 3 (Biosense Webster, Inc., Diamond Bar, CA, USA) combined with RMN. In Group A, the left atrium (LA) was mapped with a circular magnetic catheter manually and was then replaced by a RMN ablation catheter. At the end of the procedures in Group A, the circular catheter was used for confirming field stability. In Group B, an ablation catheter was controlled by RMN to perform both LA mapping and ablation. All patients underwent pulmonary vein antrum isolation. Additional complex fractionated atrial electrograms (CFAEs) ablation was performed for PsAF. Procedural, ablation, and fluoroscopy times were recorded and complications were assessed. Electrophysiological end points were achieved in all patients. Using the novel mapping system, LA mapping time was fast (308 ± 60 seconds) with detailed anatomy points (178,831 ± 70,897) collected and magnetic points throughout LA. At the end of the procedures in Group A, the LA model was confirmed to be stable and its location was within the distance threshold (1 mm). Procedure time (117.9 ± 29.6 minutes vs. 119.2 ± 29.7 minutes, P = 0.89), fluoroscopy time (6.1 ± 2.4 minutes vs. 4.8 ± 2.2 minutes, P = 0.07), and ablation time (28.0 ± 12.9 minutes vs. 27.9 ± 15.8 minutes, P = 0.98) were similar in Group A versus Group B, respectively. No complications occurred in either group. LA mapped by the novel system is stable and reliable. Combined with RMN, it could be effectively used for AF ablation without impacting overall procedural times. © 2017 Wiley Periodicals, Inc.

Static magnetic field blood pressure buffering, baroreflex vs. vascular blood pressure control mechanism.

PubMed

Gmitrov, Juraj

2010-02-01

We compared the effect of static magnetic field (SMF) and verapamil, a potent vascular calcium channel blocking agent, on sudden elevation in blood pressure in conjunction with arterial baroreflex sensitivity (BRS) and microcirculation. Forty-four experiments were performed on conscious rabbits sedated using pentobarbital intravenous (i.v.) infusion (5 mg kg(-1) h(-1)). Mean femoral artery blood pressure (MAP), heart rate, BRS and ear lobe skin microcirculatory blood flow, estimated using microphotoelectric plethysmography (MPPG), were simultaneously measured after a 40 min exposure of the sinocarotid baroreceptors to 350 mT SMF, generated by Nd(2)-Fe(14)-B magnets, or 30 min of verapamil i.v. administration (20 microg kg(-1) min(-1)). BRS was assessed from heart rate and MAP responses to i.v. bolus of nitroprusside and phenylephrine. The decrease in phenylephrine-induced abrupt elevation in MAP (DeltaMAP(AE)) was significantly larger after verapamil than after SMF exposure. DeltaMAP(AE) inversely correlated with verapamil-induced significant increase in DeltaMPPG (r = 0.53, p < 0.000) and with SMF-induced significant increase in DeltaBRS (r = 0.47, p < 0.016). Our results suggest that verapamil-potentiated vascular blood pressure buffering mechanism was more effective than SMF-potentiated baroreflex-mediated blood pressure buffering mechanism, and a potential benefit of both approaches in cardiovascular conditions with abrupt high elevation in blood pressure.

7 CFR 12.22 - Highly erodible field determination criteria.

Code of Federal Regulations, 2014 CFR

2014-01-01

... percent or more of the total field acreage is identified as soil map units which are highly erodible; or (2) 50 or more acres in such field are identified as soil map units which are highly erodible. (b...

7 CFR 12.22 - Highly erodible field determination criteria.

Code of Federal Regulations, 2013 CFR

2013-01-01

... percent or more of the total field acreage is identified as soil map units which are highly erodible; or (2) 50 or more acres in such field are identified as soil map units which are highly erodible. (b...

7 CFR 12.22 - Highly erodible field determination criteria.

Code of Federal Regulations, 2011 CFR

2011-01-01

... percent or more of the total field acreage is identified as soil map units which are highly erodible; or (2) 50 or more acres in such field are identified as soil map units which are highly erodible. (b...

7 CFR 12.22 - Highly erodible field determination criteria.

Code of Federal Regulations, 2012 CFR

2012-01-01

... percent or more of the total field acreage is identified as soil map units which are highly erodible; or (2) 50 or more acres in such field are identified as soil map units which are highly erodible. (b...

Distortion correction in EPI at ultra-high-field MRI using PSF mapping with optimal combination of shift detection dimension.

PubMed

Oh, Se-Hong; Chung, Jun-Young; In, Myung-Ho; Zaitsev, Maxim; Kim, Young-Bo; Speck, Oliver; Cho, Zang-Hee

2012-10-01

Despite its wide use, echo-planar imaging (EPI) suffers from geometric distortions due to off-resonance effects, i.e., strong magnetic field inhomogeneity and susceptibility. This article reports a novel method for correcting the distortions observed in EPI acquired at ultra-high-field such as 7 T. Point spread function (PSF) mapping methods have been proposed for correcting the distortions in EPI. The PSF shift map can be derived either along the nondistorted or the distorted coordinates. Along the nondistorted coordinates more information about compressed areas is present but it is prone to PSF-ghosting artifacts induced by large k-space shift in PSF encoding direction. In contrast, shift maps along the distorted coordinates contain more information in stretched areas and are more robust against PSF-ghosting. In ultra-high-field MRI, an EPI contains both compressed and stretched regions depending on the B0 field inhomogeneity and local susceptibility. In this study, we present a new geometric distortion correction scheme, which selectively applies the shift map with more information content. We propose a PSF-ghost elimination method to generate an artifact-free pixel shift map along nondistorted coordinates. The proposed method can correct the effects of the local magnetic field inhomogeneity induced by the susceptibility effects along with the PSF-ghost artifact cancellation. We have experimentally demonstrated the advantages of the proposed method in EPI data acquisitions in phantom and human brain using 7-T MRI. Copyright © 2011 Wiley Periodicals, Inc.

Chemical Shift Encoded Water–Fat Separation Using Parallel Imaging and Compressed Sensing

PubMed Central

Sharma, Samir D.; Hu, Houchun H.; Nayak, Krishna S.

2013-01-01

Chemical shift encoded techniques have received considerable attention recently because they can reliably separate water and fat in the presence of off-resonance. The insensitivity to off-resonance requires that data be acquired at multiple echo times, which increases the scan time as compared to a single echo acquisition. The increased scan time often requires that a compromise be made between the spatial resolution, the volume coverage, and the tolerance to artifacts from subject motion. This work describes a combined parallel imaging and compressed sensing approach for accelerated water–fat separation. In addition, the use of multiscale cubic B-splines for B0 field map estimation is introduced. The water and fat images and the B0 field map are estimated via an alternating minimization. Coil sensitivity information is derived from a calculated k-space convolution kernel and l1-regularization is imposed on the coil-combined water and fat image estimates. Uniform water–fat separation is demonstrated from retrospectively undersampled data in the liver, brachial plexus, ankle, and knee as well as from a prospectively undersampled acquisition of the knee at 8.6x acceleration. PMID:22505285

High Spatial Resolution and Temporally Resolved T2 * Mapping of Normal Human Myocardium at 7.0 Tesla: An Ultrahigh Field Magnetic Resonance Feasibility Study

PubMed Central

Hezel, Fabian; Thalhammer, Christof; Waiczies, Sonia; Schulz-Menger, Jeanette; Niendorf, Thoralf

2012-01-01

Myocardial tissue characterization using T2 * relaxation mapping techniques is an emerging application of (pre)clinical cardiovascular magnetic resonance imaging. The increase in microscopic susceptibility at higher magnetic field strengths renders myocardial T2 * mapping at ultrahigh magnetic fields conceptually appealing. This work demonstrates the feasibility of myocardial T2 * imaging at 7.0 T and examines the applicability of temporally-resolved and high spatial resolution myocardial T2 * mapping. In phantom experiments single cardiac phase and dynamic (CINE) gradient echo imaging techniques provided similar T2 * maps. In vivo studies showed that the peak-to-peak B0 difference following volume selective shimming was reduced to approximately 80 Hz for the four chamber view and mid-ventricular short axis view of the heart and to 65 Hz for the left ventricle. No severe susceptibility artifacts were detected in the septum and in the lateral wall for T2 * weighting ranging from TE = 2.04 ms to TE = 10.2 ms. For TE >7 ms, a susceptibility weighting induced signal void was observed within the anterior and inferior myocardial segments. The longest T2 * values were found for anterior (T2 * = 14.0 ms), anteroseptal (T2 * = 17.2 ms) and inferoseptal (T2 * = 16.5 ms) myocardial segments. Shorter T2 * values were observed for inferior (T2 * = 10.6 ms) and inferolateral (T2 * = 11.4 ms) segments. A significant difference (p = 0.002) in T2 * values was observed between end-diastole and end-systole with T2 * changes of up to approximately 27% over the cardiac cycle which were pronounced in the septum. To conclude, these results underscore the challenges of myocardial T2 * mapping at 7.0 T but demonstrate that these issues can be offset by using tailored shimming techniques and dedicated acquisition schemes. PMID:23251708

B1 transmit phase gradient coil for single-axis TRASE RF encoding.

PubMed

Deng, Qunli; King, Scott B; Volotovskyy, Vyacheslav; Tomanek, Boguslaw; Sharp, Jonathan C

2013-07-01

TRASE (Transmit Array Spatial Encoding) MRI uses RF transmit phase gradients instead of B0 field gradients for k-space traversal and high-resolution MR image formation. Transmit coil performance is a key determinant of TRASE image quality. The purpose of this work is to design an optimized RF transmit phase gradient array for spatial encoding in a transverse direction (x- or y- axis) for a 0.2T vertical B0 field MRI system, using a single transmitter channel. This requires the generation of two transmit B1 RF fields with uniform amplitude and positive and negative linear phase gradients respectively over the imaging volume. A two-element array consisting of a double Maxwell-type coil and a Helmholtz-type coil was designed using 3D field simulations. The phase gradient polarity is set by the relative phase of the RF signals driving the simultaneously energized elements. Field mapping and 1D TRASE imaging experiments confirmed that the constructed coil produced the fields and operated as designed. A substantially larger imaging volume relative to that obtainable from a non-optimized Maxwell-Helmholtz design was achieved. The Maxwell (sine)-Helmholtz (cosine) approach has proven successful for a horizontal phase gradient coil. A similar approach may be useful for other phase-gradient coil designs. Copyright © 2013 Elsevier Inc. All rights reserved.

Multitracer CMB delensing maps from Planck and WISE data

NASA Astrophysics Data System (ADS)

Yu, Byeonghee; Hill, J. Colin; Sherwin, Blake D.

2017-12-01

Delensing, the removal of the limiting lensing B -mode background, is crucial for the success of future cosmic microwave background (CMB) surveys in constraining inflationary gravitational waves (IGWs). In recent work, delensing with large-scale structure tracers has emerged as a promising method both for improving constraints on IGWs and for testing delensing methods for future use. However, the delensing fractions (i.e., the fraction of the lensing-B mode power removed) achieved by recent efforts have been only 20%-30%. In this work, we provide a detailed characterization of a full-sky, dust-cleaned cosmic infrared background (CIB) map for delensing and construct a further-improved delensing template by adding additional tracers to increase delensing performance. In particular, we build a multitracer delensing template by combining the dust-cleaned Planck CIB map with a reconstructed CMB lensing map from Planck and a galaxy number density map from the Wide-field Infrared Survey Explorer (WISE) satellite. For this combination, we calculate the relevant weightings by fitting smooth templates to measurements of all the cross-spectra and autospectra of these maps. On a large fraction of the sky (fsky=0.43 ), we demonstrate that our maps are capable of providing a delensing factor of 43 ±1 % ; using a more restrictive mask (fsky=0.11 ), the delensing factor reaches 48 ±1 % . For low-noise surveys, our delensing maps, which cover much of the sky, can thus improve constraints on the tensor-to-scalar ratio (r ) by nearly a factor of 2. The delensing tracer maps are made publicly available, and we encourage their use in ongoing and upcoming B -mode surveys.

Nonabelian noncommutative gauge theory via noncommutative extra dimensions

NASA Astrophysics Data System (ADS)

Jurčo, Branislav; Schupp, Peter; Wess, Julius

2001-06-01

The concept of covariant coordinates on noncommutative spaces leads directly to gauge theories with generalized noncommutative gauge fields of the type that arises in string theory with background B-fields. The theory is naturally expressed in terms of cochains in an appropriate cohomology; we discuss how it fits into the framework of projective modules. The equivalence of star products that arise from the background field with and without fluctuations and Kontsevich's formality theorem allow an explicitly construction of a map that relates ordinary gauge theory and noncommutative gauge theory (Seiberg-Witten map). As application we show the exact equality of the Dirac-Born-Infeld action with B-field in the commutative setting and its semi-noncommutative cousin in the intermediate picture. Using noncommutative extra dimensions the construction is extended to noncommutative nonabelian gauge theory for arbitrary gauge groups; an explicit map between abelian and nonabelian gauge fields is given. All constructions are also valid for non-constant B-field, Poisson structure and metric.

Encoding methods for B1+ mapping in parallel transmit systems at ultra high field

NASA Astrophysics Data System (ADS)

Tse, Desmond H. Y.; Poole, Michael S.; Magill, Arthur W.; Felder, Jörg; Brenner, Daniel; Jon Shah, N.

2014-08-01

Parallel radiofrequency (RF) transmission, either in the form of RF shimming or pulse design, has been proposed as a solution to the B1+ inhomogeneity problem in ultra high field magnetic resonance imaging. As a prerequisite, accurate B1+ maps from each of the available transmit channels are required. In this work, four different encoding methods for B1+ mapping, namely 1-channel-on, all-channels-on-except-1, all-channels-on-1-inverted and Fourier phase encoding, were evaluated using dual refocusing acquisition mode (DREAM) at 9.4 T. Fourier phase encoding was demonstrated in both phantom and in vivo to be the least susceptible to artefacts caused by destructive RF interference at 9.4 T. Unlike the other two interferometric encoding schemes, Fourier phase encoding showed negligible dependency on the initial RF phase setting and therefore no prior B1+ knowledge is required. Fourier phase encoding also provides a flexible way to increase the number of measurements to increase SNR, and to allow further reduction of artefacts by weighted decoding. These advantages of Fourier phase encoding suggest that it is a good choice for B1+ mapping in parallel transmit systems at ultra high field.

Toward the identification of a reliable 3D-QSAR model for the protein tyrosine phosphatase 1B inhibitors

NASA Astrophysics Data System (ADS)

Wang, Fangfang; Zhou, Bo

2018-04-01

Protein tyrosine phosphatase 1B (PTP1B) is an intracellular non-receptor phosphatase that is implicated in signal transduction of insulin and leptin pathways, thus PTP1B is considered as potential target for treating type II diabetes and obesity. The present article is an attempt to formulate the three-dimensional quantitative structure-activity relationship (3D-QSAR) modeling of a series of compounds possessing PTP1B inhibitory activities using comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA) techniques. The optimum template ligand-based models are statistically significant with great CoMFA (R2cv = 0.600, R2pred = 0.6760) and CoMSIA (R2cv = 0.624, R2pred = 0.8068) values. Molecular docking was employed to elucidate the inhibitory mechanisms of this series of compounds against PTP1B. In addition, the CoMFA and CoMSIA field contour maps agree well with the structural characteristics of the binding pocket of PTP1B active site. The knowledge of structure-activity relationship and ligand-receptor interactions from 3D-QSAR model and molecular docking will be useful for better understanding the mechanism of ligand-receptor interaction and facilitating development of novel compounds as potent PTP1B inhibitors.

A new RF transmit coil for foot and ankle imaging at 7T MRI.

PubMed

Santini, Tales; Kim, Junghwan; Wood, Sossena; Krishnamurthy, Narayanan; Farhat, Nadim; Maciel, Carlos; Raval, Shailesh B; Zhao, Tiejun; Ibrahim, Tamer S

2018-01-01

A four-channel Tic-Tac-Toe (TTT) transmit RF coil was designed and constructed for foot and ankle imaging at 7T MRI. Numerical simulations using an in-house developed FDTD package and experimental analyses using a homogenous phantom show an excellent agreement in terms of B 1 + field distribution and s-parameters. Simulations performed on an anatomically detailed human lower leg model demonstrated an B 1 + field distribution with a coefficient of variation (CV) of 23.9%/15.6%/28.8% and average B 1 + of 0.33μT/0.56μT/0.43μT for 1W input power (i.e., 0.25W per channel) in the ankle/calcaneus/mid foot respectively. In-vivo B 1 + mapping shows an average B 1 + of 0.29μT over the entire foot/ankle. This newly developed RF coil also presents acceptable levels of average SAR (0.07W/kg for 10g per 1W of input power) and peak SAR (0.34W/kg for 10g per 1W of input power) over the whole lower leg. Preliminary in-vivo images in the foot/ankle were acquired using the T2-DESS MRI sequence without the use of a dedicated receive-only array. Copyright © 2017. Published by Elsevier Inc.

Magnetoresistance of an Anderson insulator of bosons.

PubMed

Gangopadhyay, Anirban; Galitski, Victor; Müller, Markus

2013-07-12

We study the magnetoresistance of two-dimensional bosonic Anderson insulators. We describe the change in spatial decay of localized excitations in response to a magnetic field, which is given by an interference sum over alternative tunneling trajectories. The excitations become more localized with increasing field (in sharp contrast to generic fermionic excitations which get weakly delocalized): the localization length ξ(B) is found to change as ξ(-1)(B)-ξ(-1)(0)~B(4/5). The quantum interference problem maps onto the classical statistical mechanics of directed polymers in random media (DPRM). We explain the observed scaling using a simplified droplet model which incorporates the nontrivial DPRM exponents. Our results have implications for a variety of experiments on magnetic-field-tuned superconductor-to-insulator transitions observed in disordered films, granular superconductors, and Josephson junction arrays, as well as for cold atoms in artificial gauge fields.

Dynamics of paramagnetic agents by off-resonance rotating frame technique

NASA Astrophysics Data System (ADS)

Zhang, Huiming; Xie, Yang

2006-12-01

Off-resonance rotating frame technique offers a novel tool to explore the dynamics of paramagnetic agents at high magnetic fields ( B0 > 3 T). Based on the effect of paramagnetic relaxation enhancement in the off-resonance rotating frame, a new method is described here for determining the dynamics of paramagnetic ion chelates from the residual z-magnetizations of water protons. In this method, the dynamics of the chelates are identified by the difference magnetization profiles, which are the subtraction of the residual z-magnetization as a function of frequency offset obtained at two sets of RF amplitude ω1 and pulse duration τ. The choices of ω1 and τ are guided by a 2-D magnetization map that is created numerically by plotting the residual z-magnetization as a function of effective field angle θ and off-resonance pulse duration τ. From the region of magnetization map that is the most sensitive to the alteration of the paramagnetic relaxation enhancement efficiency R1 ρ/ R1, the ratio of the off-resonance rotating frame relaxation rate constant R1 ρ verse the laboratory frame relaxation rate constant R1, three types of difference magnetization profiles can be generated. The magnetization map and the difference magnetization profiles are correlated with the rotational correlation time τR of Gd-DTPA through numerical simulations, and further validated by the experimental data for a series of macromolecule conjugated Gd-DTPA in aqueous solutions. Effects of hydration water number q, diffusion coefficient D, magnetic field strength B0 and multiple rotational correlation times are explored with the simulations of the magnetization map. This method not only provides a simple and reliable approach to determine the dynamics of paramagnetic labeling of molecular/cellular events at high magnetic fields, but also a new strategy for spectral editing in NMR/MRI based on the dynamics of paramagnetic labeling in vivo.

Mapping shallow waters habitats using OBIA by applying several approaches of depth invariant index in North Kepulauan Seribu

NASA Astrophysics Data System (ADS)

Siregar, V. P.; Agus, S. B.; Subarno, T.; Prabowo, N. W.

2018-05-01

The availability of satellite imagery with a variety of spatial resolution, both free access and commercial become as an option in utilizing the remote sensing technology. Variability of the water column is one of the factors affecting the interpretation results when mapping marine shallow waters. This study aimed to evaluate the influence of water column correction (depth-invariant index) on the accuracy of shallow water habitat classification results using OBIA. This study was conducted in North of Kepulauan Seribu, precisely in Harapan Island and its surrounding areas. Habitat class schemes were based on field observations, which were then used to build habitat classes on satellite imagery. The water column correction was applied to the three pairs of SPOT-7 multispectral bands, which were subsequently used in object-based classification. Satellite image classification was performed with four different approaches, namely (i) using DII transformed bands with single pair band input (B1B2), (ii) multi pairs bands (B1B2, B1B3, and B2B3), (iii) combination of multi pairs band and initial bands, and (iv) only using initial bands. The accuracy test results of the four inputs show the values of Overall Accuracy and Kappa Statistics, respectively 55.84 and 0.48; 68.53 and 0.64; 78.68 and 0.76; 77.66 and 0.74. It shows that the best results when using DII and initial band combination for shallow water benthic classification in this study site.

Correlation of ICME Magnetic Fields at Radially Aligned Spacecraft

NASA Astrophysics Data System (ADS)

Good, S. W.; Forsyth, R. J.; Eastwood, J. P.; Möstl, C.

2018-03-01

The magnetic field structures of two interplanetary coronal mass ejections (ICMEs), each observed by a pair of spacecraft close to radial alignment, have been analysed. The ICMEs were observed in situ by MESSENGER and STEREO-B in November 2010 and November 2011, while the spacecraft were separated by more than 0.6 AU in heliocentric distance, less than 4° in heliographic longitude, and less than 7° in heliographic latitude. Both ICMEs took approximately two days to travel between the spacecraft. The ICME magnetic field profiles observed at MESSENGER have been mapped to the heliocentric distance of STEREO-B and compared directly to the profiles observed by STEREO-B. Figures that result from this mapping allow for easy qualitative assessment of similarity in the profiles. Macroscale features in the profiles that varied on timescales of one hour, and which corresponded to the underlying flux rope structure of the ICMEs, were well correlated in the solar east-west and north-south directed components, with Pearson's correlation coefficients of approximately 0.85 and 0.95, respectively; microscale features with timescales of one minute were uncorrelated. Overall correlation values in the profiles of one ICME were increased when an apparent change in the flux rope axis direction between the observing spacecraft was taken into account. The high degree of similarity seen in the magnetic field profiles may be interpreted in two ways. If the spacecraft sampled the same region of each ICME ( i.e. if the spacecraft angular separations are neglected), the similarity indicates that there was little evolution in the underlying structure of the sampled region during propagation. Alternatively, if the spacecraft observed different, nearby regions within the ICMEs, it indicates that there was spatial homogeneity across those different regions. The field structure similarity observed in these ICMEs points to the value of placing in situ space weather monitors well upstream of the Earth.

MR-based measurements and simulations of the magnetic field created by a realistic transcranial magnetic stimulation (TMS) coil and stimulator.

PubMed

Mandija, Stefano; Petrov, Petar I; Neggers, Sebastian F W; Luijten, Peter R; van den Berg, Cornelis A T

2016-11-01

Transcranial magnetic stimulation (TMS) is an emerging technique that allows non-invasive neurostimulation. However, the correct validation of electromagnetic models of typical TMS coils and the correct assessment of the incident TMS field (B TMS ) produced by standard TMS stimulators are still lacking. Such a validation can be performed by mapping B TMS produced by a realistic TMS setup. In this study, we show that MRI can provide precise quantification of the magnetic field produced by a realistic TMS coil and a clinically used TMS stimulator in the region in which neurostimulation occurs. Measurements of the phase accumulation created by TMS pulses applied during a tailored MR sequence were performed in a phantom. Dedicated hardware was developed to synchronize a typical, clinically used, TMS setup with a 3-T MR scanner. For comparison purposes, electromagnetic simulations of B TMS were performed. MR-based measurements allow the mapping and quantification of B TMS starting 2.5 cm from the TMS coil. For closer regions, the intra-voxel dephasing induced by B TMS prohibits TMS field measurements. For 1% TMS output, the maximum measured value was ~0.1 mT. Simulations reflect quantitatively the experimental data. These measurements can be used to validate electromagnetic models of TMS coils, to guide TMS coil positioning, and for dosimetry and quality assessment of concurrent TMS-MRI studies without the need for crude methods, such as motor threshold, for stimulation dose determination. Copyright © 2016 John Wiley & Sons, Ltd.

Geologic Map of the Central Marysvale Volcanic Field, Southwestern Utah

USGS Publications Warehouse

Rowley, Peter D.; Cunningham, Charles G.; Steven, Thomas A.; Workman, Jeremiah B.; Anderson, John J.; Theissen, Kevin M.

2002-01-01

The geologic map of the central Marysvale volcanic field, southwestern Utah, shows the geology at 1:100,000 scale of the heart of one of the largest Cenozoic volcanic fields in the Western United States. The map shows the area of 38 degrees 15' to 38 degrees 42'30' N., and 112 degrees to 112 degrees 37'30' W. The Marysvale field occurs mostly in the High Plateaus, a subprovince of the Colorado Plateau and structurally a transition zone between the complexly deformed Great Basin to the west and the stable, little-deformed main part of the Colorado Plateau to the east. The western part of the field is in the Great Basin proper. The volcanic rocks and their source intrusions in the volcanic field range in age from about 31 Ma (Oligocene) to about 0.5 Ma (Pleistocene). These rocks overlie sedimentary rocks exposed in the mapped area that range in age from Ordovician to early Cenozoic. The area has been deformed by thrust faults and folds formed during the late Mesozoic to early Cenozoic Sevier deformational event, and later by mostly normal faults and folds of the Miocene to Quaternary basin-range episode. The map revises and updates knowledge gained during a long-term U.S. Geological Survey investigation of the volcanic field, done in part because of its extensive history of mining. The investigation also was done to provide framework geologic knowledge suitable for defining geologic and hydrologic hazards, for locating hydrologic and mineral resources, and for an understanding of geologic processes in the area. A previous geologic map (Cunningham and others, 1983, U.S. Geological Survey Miscellaneous Investigations Series I-1430-A) covered the same area as this map but was published at 1:50,000 scale and is obsolete due to new data. This new geologic map of the central Marysvale field, here published as U.S. Geological Survey Geologic Investigations Series I-2645-A, is accompanied by gravity and aeromagnetic maps of the same area and the same scale (Campbell and others, 1999, U.S. Geological Survey Geologic Investigations Series I-2645-B).

Design of a mobile, homogeneous, and efficient electromagnet with a large field of view for neonatal low-field MRI.

PubMed

Lother, Steffen; Schiff, Steven J; Neuberger, Thomas; Jakob, Peter M; Fidler, Florian

2016-08-01

In this work, a prototype of an effective electromagnet with a field-of-view (FoV) of 140 mm for neonatal head imaging is presented. The efficient implementation succeeded by exploiting the use of steel plates as a housing system. We achieved a compromise between large sample volumes, high homogeneity, high B0 field, low power consumption, light weight, simple fabrication, and conserved mobility without the necessity of a dedicated water cooling system. The entire magnetic resonance imaging (MRI) system (electromagnet, gradient system, transmit/receive coil, control system) is introduced and its unique features discussed. Furthermore, simulations using a numerical optimization algorithm for magnet and gradient system are presented. Functionality and quality of this low-field scanner operating at 23 mT (generated with 500 W) is illustrated using spin-echo imaging (in-plane resolution 1.6 mm × 1.6 mm, slice thickness 5 mm, and signal-to-noise ratio (SNR) of 23 with a acquisition time of 29 min). B0 field-mapping measurements are presented to characterize the homogeneity of the magnet, and the B0 field limitations of 80 mT of the system are fully discussed. The cryogen-free system presented here demonstrates that this electromagnet with a ferromagnetic housing can be optimized for MRI with an enhanced and homogeneous magnetic field. It offers an alternative to prepolarized MRI designs in both readout field strength and power use. There are multiple indications for the clinical medical application of such low-field devices.

Design of a mobile, homogeneous, and efficient electromagnet with a large field of view for neonatal low-field MRI

PubMed Central

Schiff, Steven J.; Neuberger, Thomas; Jakob, Peter M.; Fidler, Florian

2017-01-01

Objective In this work, a prototype of an effective electromagnet with a field-of-view (FoV) of 140 mm for neonatal head imaging is presented. The efficient implementation succeeded by exploiting the use of steel plates as a housing system. We achieved a compromise between large sample volumes, high homogeneity, high B0 field, low power consumption, light weight, simple fabrication, and conserved mobility without the necessity of a dedicated water cooling system. Materials and methods The entire magnetic resonance imaging (MRI) system (electromagnet, gradient system, transmit/receive coil, control system) is introduced and its unique features discussed. Furthermore, simulations using a numerical optimization algorithm for magnet and gradient system are presented. Results Functionality and quality of this low-field scanner operating at 23 mT (generated with 500 W) is illustrated using spin-echo imaging (in-plane resolution 1.6 mm × 1.6 mm, slice thickness 5 mm, and signal-to-noise ratio (SNR) of 23 with a acquisition time of 29 min). B0 field-mapping measurements are presented to characterize the homogeneity of the magnet, and the B0 field limitations of 80 mT of the system are fully discussed. Conclusion The cryogen-free system presented here demonstrates that this electromagnet with a ferromagnetic housing can be optimized for MRI with an enhanced and homogeneous magnetic field. It offers an alternative to pre-polarized MRI designs in both readout field strength and power use. There are multiple indications for the clinical medical application of such low-field devices. PMID:26861046

Dispersion curve estimation via a spatial covariance method with ultrasonic wavefield imaging.

PubMed

Chong, See Yenn; Todd, Michael D

2018-05-01

Numerous Lamb wave dispersion curve estimation methods have been developed to support damage detection and localization strategies in non-destructive evaluation/structural health monitoring (NDE/SHM) applications. In this paper, the covariance matrix is used to extract features from an ultrasonic wavefield imaging (UWI) scan in order to estimate the phase and group velocities of S0 and A0 modes. A laser ultrasonic interrogation method based on a Q-switched laser scanning system was used to interrogate full-field ultrasonic signals in a 2-mm aluminum plate at five different frequencies. These full-field ultrasonic signals were processed in three-dimensional space-time domain. Then, the time-dependent covariance matrices of the UWI were obtained based on the vector variables in Cartesian and polar coordinate spaces for all time samples. A spatial covariance map was constructed to show spatial correlations within the full wavefield. It was observed that the variances may be used as a feature for S0 and A0 mode properties. The phase velocity and the group velocity were found using a variance map and an enveloped variance map, respectively, at five different frequencies. This facilitated the estimation of Lamb wave dispersion curves. The estimated dispersion curves of the S0 and A0 modes showed good agreement with the theoretical dispersion curves. Copyright © 2018 Elsevier B.V. All rights reserved.

KSC-2011-6812

NASA Image and Video Library

2011-09-08

CAPE CANAVERAL, Fla. -- The countdown to launch of the United Launch Alliance Delta II Heavy rocket for NASA's Gravity Recovery and Interior Laboratory mission nears T-0 at Space Launch Complex 17B on Cape Canaveral Air Force Station. Liftoff is scheduled for 8:37:06 a.m. EDT. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future lunar vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/Ken Thornsley

3D-QSAR and Molecular Docking Studies on Derivatives of MK-0457, GSK1070916 and SNS-314 as Inhibitors against Aurora B Kinase

PubMed Central

Zhang, Baidong; Li, Yan; Zhang, Huixiao; Ai, Chunzhi

2010-01-01

Development of anticancer drugs targeting Aurora B, an important member of the serine/threonine kinases family, has been extensively focused on in recent years. In this work, by applying an integrated computational method, including comparative molecular field analysis (CoMFA), comparative molecular similarity indices analysis (CoMSIA), homology modeling and molecular docking, we investigated the structural determinants of Aurora B inhibitors based on three different series of derivatives of 108 molecules. The resultant optimum 3D-QSAR models exhibited (q2 = 0.605, r2pred = 0.826), (q2 = 0.52, r2pred = 0.798) and (q2 = 0.582, r2pred = 0.971) for MK-0457, GSK1070916 and SNS-314 classes, respectively, and the 3D contour maps generated from these models were analyzed individually. The contour map analysis for the MK-0457 model revealed the relative importance of steric and electrostatic effects for Aurora B inhibition, whereas, the electronegative groups with hydrogen bond donating capacity showed a great impact on the inhibitory activity for the derivatives of GSK1070916. Additionally, the predictive model of the SNS-314 class revealed the great importance of hydrophobic favorable contour, since hydrophobic favorable substituents added to this region bind to a deep and narrow hydrophobic pocket composed of residues that are hydrophobic in nature and thus enhanced the inhibitory activity. Moreover, based on the docking study, a further comparison of the binding modes was accomplished to identify a set of critical residues that play a key role in stabilizing the drug-target interactions. Overall, the high level of consistency between the 3D contour maps and the topographical features of binding sites led to our identification of several key structural requirements for more potency inhibitors. Taken together, the results will serve as a basis for future drug development of inhibitors against Aurora B kinase for various tumors. PMID:21151441

3D-QSAR and molecular docking studies on derivatives of MK-0457, GSK1070916 and SNS-314 as inhibitors against Aurora B kinase.

PubMed

Zhang, Baidong; Li, Yan; Zhang, Huixiao; Ai, Chunzhi

2010-11-02

Development of anticancer drugs targeting Aurora B, an important member of the serine/threonine kinases family, has been extensively focused on in recent years. In this work, by applying an integrated computational method, including comparative molecular field analysis (CoMFA), comparative molecular similarity indices analysis (CoMSIA), homology modeling and molecular docking, we investigated the structural determinants of Aurora B inhibitors based on three different series of derivatives of 108 molecules. The resultant optimum 3D-QSAR models exhibited (q(2) = 0.605, r(2) (pred) = 0.826), (q(2) = 0.52, r(2) (pred) = 0.798) and (q(2) = 0.582, r(2) (pred) = 0.971) for MK-0457, GSK1070916 and SNS-314 classes, respectively, and the 3D contour maps generated from these models were analyzed individually. The contour map analysis for the MK-0457 model revealed the relative importance of steric and electrostatic effects for Aurora B inhibition, whereas, the electronegative groups with hydrogen bond donating capacity showed a great impact on the inhibitory activity for the derivatives of GSK1070916. Additionally, the predictive model of the SNS-314 class revealed the great importance of hydrophobic favorable contour, since hydrophobic favorable substituents added to this region bind to a deep and narrow hydrophobic pocket composed of residues that are hydrophobic in nature and thus enhanced the inhibitory activity. Moreover, based on the docking study, a further comparison of the binding modes was accomplished to identify a set of critical residues that play a key role in stabilizing the drug-target interactions. Overall, the high level of consistency between the 3D contour maps and the topographical features of binding sites led to our identification of several key structural requirements for more potency inhibitors. Taken together, the results will serve as a basis for future drug development of inhibitors against Aurora B kinase for various tumors.

The State-of-the-art HST Astro-photometric Analysis of the Core of ω Centauri. II. Differential-reddening Map

NASA Astrophysics Data System (ADS)

Bellini, A.; Anderson, J.; van der Marel, R. P.; King, I. R.; Piotto, G.; Bedin, L. R.

2017-06-01

We take advantage of the exquisite quality of the Hubble Space Telescope astro-photometric catalog of the core of ωCen presented in the first paper of this series to derive a high-resolution, high-precision, high-accuracy differential-reddening map of the field. The map has a spatial resolution of 2 × 2 arcsec2 over a total field of view of about 4.‧3 × 4.‧3. The differential reddening itself is estimated via an iterative procedure using five distinct color-magnitude diagrams, which provided consistent results to within the 0.1% level. Assuming an average reddening value E(B - V) = 0.12, the differential reddening within the cluster’s core can vary by up to ±10%, with a typical standard deviation of about 4%. Our differential-reddening map is made available to the astronomical community in the form of a multi-extension FITS file. This differential-reddening map is essential for a detailed understanding of the multiple stellar populations of ωCen, as presented in the next paper in this series. Moreover, it provides unique insight into the level of small spatial-scale extinction variations in the Galactic foreground. Based on archival observations with the NASA/ESA Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated by AURA, Inc., under NASA contract NAS 5-26555.

Stability of Gradient Field Corrections for Quantitative Diffusion MRI.

PubMed

Rogers, Baxter P; Blaber, Justin; Welch, E Brian; Ding, Zhaohua; Anderson, Adam W; Landman, Bennett A

2017-02-11

In magnetic resonance diffusion imaging, gradient nonlinearity causes significant bias in the estimation of quantitative diffusion parameters such as diffusivity, anisotropy, and diffusion direction in areas away from the magnet isocenter. This bias can be substantially reduced if the scanner- and coil-specific gradient field nonlinearities are known. Using a set of field map calibration scans on a large (29 cm diameter) phantom combined with a solid harmonic approximation of the gradient fields, we predicted the obtained b-values and applied gradient directions throughout a typical field of view for brain imaging for a typical 32-direction diffusion imaging sequence. We measured the stability of these predictions over time. At 80 mm from scanner isocenter, predicted b-value was 1-6% different than intended due to gradient nonlinearity, and predicted gradient directions were in error by up to 1 degree. Over the course of one month the change in these quantities due to calibration-related factors such as scanner drift and variation in phantom placement was <0.5% for b-values, and <0.5 degrees for angular deviation. The proposed calibration procedure allows the estimation of gradient nonlinearity to correct b-values and gradient directions ahead of advanced diffusion image processing for high angular resolution data, and requires only a five-minute phantom scan that can be included in a weekly or monthly quality assurance protocol.

Mapping the total electron content over Malaysia using Spherical Cap Harmonic Analysis

NASA Astrophysics Data System (ADS)

Bahari, S.; Abdullah, M.; Bouya, Z.; Musa, T. A.

2017-12-01

The ionosphere over Malaysia is unique because of her location which is in close proximity to the geomagnetic equator and is in the equatorial regions. In this region, the magnetic field is horizontally oriented from south to north and field aligned direction is in the meridional plane (ExB) which becomes the source of equatorial ionospheric anomaly occurrence such as plasma bubble, fountain effects and others. Until today, there is no model that has been developed over Malaysia to study the ionosphere. Due to that, the main objective of this paper is to develop a new technique for mapping the total electron content (TEC) from GPS measurements. Data by myRTKnet network of GPS receiver over Malaysia were used in this study. A new methodology, based on modified spherical cap harmonic analysis (SCHA), was developed to estimate diurnal vertical TEC over the region using GPS observations. The SCHA model is based on longitudinal expansion in Fourier series and fractional Legendre co-latitudinal functions over a spherical cap-like region. The TEC map with spatial resolution of 0.15 ° x 0.15 ° in latitude and longitude with the time resolution of 30 seconds are derived. TEC maps from the SCHA model were compared with the global ionospheric map and other regional models. Result shows that during low solar activity, SCHA model had a better mapping with the accuracy of less than 1 TECU compared to other regional models.

Soil pH Mapping with an On-The-Go Sensor

PubMed Central

Schirrmann, Michael; Gebbers, Robin; Kramer, Eckart; Seidel, Jan

2011-01-01

Soil pH is a key parameter for crop productivity, therefore, its spatial variation should be adequately addressed to improve precision management decisions. Recently, the Veris pH Manager™, a sensor for high-resolution mapping of soil pH at the field scale, has been made commercially available in the US. While driving over the field, soil pH is measured on-the-go directly within the soil by ion selective antimony electrodes. The aim of this study was to evaluate the Veris pH Manager™ under farming conditions in Germany. Sensor readings were compared with data obtained by standard protocols of soil pH assessment. Experiments took place under different scenarios: (a) controlled tests in the lab, (b) semicontrolled test on transects in a stop-and-go mode, and (c) tests under practical conditions in the field with the sensor working in its typical on-the-go mode. Accuracy issues, problems, options, and potential benefits of the Veris pH Manager™ were addressed. The tests demonstrated a high degree of linearity between standard laboratory values and sensor readings. Under practical conditions in the field (scenario c), the measure of fit (r2) for the regression between the on-the-go measurements and the reference data was 0.71, 0.63, and 0.84, respectively. Field-specific calibration was necessary to reduce systematic errors. Accuracy of the on-the-go maps was considerably higher compared with the pH maps obtained by following the standard protocols, and the error in calculating lime requirements was reduced by about one half. However, the system showed some weaknesses due to blockage by residual straw and weed roots. If these problems were solved, the on-the-go sensor investigated here could be an efficient alternative to standard sampling protocols as a basis for liming in Germany. PMID:22346591

Soil pH mapping with an on-the-go sensor.

PubMed

Schirrmann, Michael; Gebbers, Robin; Kramer, Eckart; Seidel, Jan

2011-01-01

Soil pH is a key parameter for crop productivity, therefore, its spatial variation should be adequately addressed to improve precision management decisions. Recently, the Veris pH Manager™, a sensor for high-resolution mapping of soil pH at the field scale, has been made commercially available in the US. While driving over the field, soil pH is measured on-the-go directly within the soil by ion selective antimony electrodes. The aim of this study was to evaluate the Veris pH Manager™ under farming conditions in Germany. Sensor readings were compared with data obtained by standard protocols of soil pH assessment. Experiments took place under different scenarios: (a) controlled tests in the lab, (b) semicontrolled test on transects in a stop-and-go mode, and (c) tests under practical conditions in the field with the sensor working in its typical on-the-go mode. Accuracy issues, problems, options, and potential benefits of the Veris pH Manager™ were addressed. The tests demonstrated a high degree of linearity between standard laboratory values and sensor readings. Under practical conditions in the field (scenario c), the measure of fit (r(2)) for the regression between the on-the-go measurements and the reference data was 0.71, 0.63, and 0.84, respectively. Field-specific calibration was necessary to reduce systematic errors. Accuracy of the on-the-go maps was considerably higher compared with the pH maps obtained by following the standard protocols, and the error in calculating lime requirements was reduced by about one half. However, the system showed some weaknesses due to blockage by residual straw and weed roots. If these problems were solved, the on-the-go sensor investigated here could be an efficient alternative to standard sampling protocols as a basis for liming in Germany.

The ALMA Spectroscopic Survey in the Hubble Ultra Deep Field: Implications for Spectral Line Intensity Mapping at Millimeter Wavelengths and CMB Spectral Distortions

NASA Astrophysics Data System (ADS)

Carilli, C. L.; Chluba, J.; Decarli, R.; Walter, F.; Aravena, M.; Wagg, J.; Popping, G.; Cortes, P.; Hodge, J.; Weiss, A.; Bertoldi, F.; Riechers, D.

2016-12-01

We present direct estimates of the mean sky brightness temperature in observing bands around 99 and 242 GHz due to line emission from distant galaxies. These values are calculated from the summed line emission observed in a blind, deep survey for spectral line emission from high redshift galaxies using ALMA (the ALMA spectral deep field observations “ASPECS” survey). In the 99 GHz band, the mean brightness will be dominated by rotational transitions of CO from intermediate and high redshift galaxies. In the 242 GHz band, the emission could be a combination of higher order CO lines, and possibly [C II] 158 μm line emission from very high redshift galaxies (z ˜ 6-7). The mean line surface brightness is a quantity that is relevant to measurements of spectral distortions of the cosmic microwave background, and as a potential tool for studying large-scale structures in the early universe using intensity mapping. While the cosmic volume and the number of detections are admittedly small, this pilot survey provides a direct measure of the mean line surface brightness, independent of conversion factors, excitation, or other galaxy formation model assumptions. The mean surface brightness in the 99 GHZ band is: T B = 0.94 ± 0.09 μK. In the 242 GHz band, the mean brightness is: T B = 0.55 ± 0.033 μK. These should be interpreted as lower limits on the average sky signal, since we only include lines detected individually in the blind survey, while in a low resolution intensity mapping experiment, there will also be the summed contribution from lower luminosity galaxies that cannot be detected individually in the current blind survey.

Diagnostic value of ADC in patients with prostate cancer: influence of the choice of b values.

PubMed

Thörmer, Gregor; Otto, Josephin; Reiss-Zimmermann, Martin; Seiwerts, Matthias; Moche, Michael; Garnov, Nikita; Franz, Toni; Do, Minh; Stolzenburg, Jens-Uwe; Horn, Lars-Christian; Kahn, Thomas; Busse, Harald

2012-08-01

To evaluate the influence of the choice of b values on the diagnostic value of the apparent diffusion coefficient (ADC) for detection and grading of prostate cancer (PCa). Forty-one patients with biopsy-proven PCa underwent endorectal 3-T MRI before prostatectomy. Different combinations of b values (0-800 s/mm(2)) were used to calculate four representative ADC maps. Mean ADCs of tumours and non-malignant tissue were determined. Tumour appearance on different ADC maps was rated by three radiologists as good, fair or poor by assigning a visual score (VS) of 2, 1 or 0, respectively. Differences in the ADC values with the choice of b values were analysed using one-way ANOVA. Choice of b values had a highly (P < 0.001) significant influence on the absolute ADC in each tissue. Maps using b = [50, 800] and [0, 800] were rated best (VS= 1.6 ± 0.3) and second best (1.1 ± 0.3, P < 0.001), respectively. For low-grade carcinomas (Gleason score ≤ 6, 13/41 patients), only the former choice received scores better than fair (VS = 1.4 ± 0.3). Mean tumour ADCs showed significant negative correlation (Spearman's ρ -0.38 to -0.46, P < 0.05) with Gleason score. Absolute ADC values strongly depend on the choice of b values and therefore should be used with caution for diagnostic purposes. A minimum b value greater than zero is recommended for ADC calculation to improve the visual assessment of PCa in ADC maps. • Absolute ADC values are highly dependent on the choice of b values. • Absolute ADC thresholds should be used carefully to predict tumour aggressiveness. • Subjective ratings of ADC maps involving b = 0 s/mm ( 2 ) are poor to fair. • Minimum b value greater than 0 s/mm ( 2 ) is recommended for ADC calculation.

Competing orders in LSCO probed by heat transport

NASA Astrophysics Data System (ADS)

Li, Shiyan; Hawthorn, D. G.; Taillefer, Louis; Yamada, K.

2006-03-01

We elucidate the nature of the thermal metal-to-insulator transition in La2-xSrxCuO4 (LSCO) [1] through measurements of the thermal conductivity κ performed very close to the transition, down to temperatures as low as 50 mK and in magnetic fields H up to 17 T. For a single crystal with x = 0.15, a monotonic increase in the residual linear term κ0/T is observed up to 17 T, as expected for a d-wave superconductor. For a crystal with x = 0.144, however, we observe an initial increase in κ0/T at low field, followed by a decrease when H exceeds a critical field H^*. This result is consistent with recent neutron scattering measurements on a similar sample [2], which show that static spin-density-wave (SDW) order is not present in zero field, but sets in at a critical magnetic field H^*, and then co-exists/competes with superconductivity (SC) for H > H^*. Taken together, these two measurements reveal that the SC phase gives way to a phase which is both magnetic and insulating, whether by increasing magnetic field or by decreasing doping. Using low-energy quasiparticle transport, we map out the T = 0 field-doping (H-x) phase diagram of LSCO. [1] D.G. Hawthorn et al., Phys. Rev. Lett. 90, 197004 (2003); X.F. Sun et al., Phys. Rev. Lett. 90, 117004 (2003). [2] B. Khaykovich et al., Phys. Rev. B 71, 220508(R) (2005).

Impact of the MLC on the MRI field distortion of a prototype MRI-linac

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kolling, Stefan; Keall, Paul; Oborn, Brad

2013-12-15

Purpose: To cope with intrafraction tumor motion, integrated MRI-linac systems for real-time image guidance are currently under development. The multileaf collimator (MLC) is a key component in every state-of-the-art radiotherapy treatment system, allowing for accurate field shaping and tumor tracking. This work quantifies the magnetic impact of a widely used MLC on the MRI field homogeneity for such a modality.Methods: The finite element method was employed to model a MRI-linac assembly comprised of a 1.0 T split-bore MRI magnet and the key ferromagnetic components of a Varian Millennium 120 MLC, namely, the leaves and motors. Full 3D magnetic field maps ofmore » the system were generated. From these field maps, the peak-to-peak distortion within the MRI imaging volume was evaluated over a 30 cm diameter sphere volume (DSV) around the isocenter and compared to a maximum preshim inhomogeneity of 300 μT. Five parametric studies were performed: (1) The source-to-isocenter distance (SID) was varied from 100 to 200 cm, to span the range of a compact system to that with lower magnetic coupling. (2) The MLC model was changed from leaves only to leaves with motors, to determine the contribution to the total distortion caused by MLC leaves and motors separately. (3) The system was configured in the inline or perpendicular orientation, i.e., the linac treatment beam was oriented parallel or perpendicular to the magnetic field direction. (4) The treatment field size was varied from 0 × 0 to 20×20 cm{sup 2}, to span the range of clinical treatment fields. (5) The coil currents were scaled linearly to produce magnetic field strengths B{sub 0} of 0.5, 1.0, and 1.5 T, to estimate how the MLC impact changes with B{sub 0}.Results: (1) The MLC-induced MRI field distortion fell continuously with increasing SID. (2) MLC leaves and motors were found to contribute to the distortion in approximately equal measure. (3) Due to faster falloff of the fringe field, the field distortion was generally smaller in the perpendicular beam orientation. The peak-to-peak DSV distortion was below 300 μT at SID≥130 cm (perpendicular) and SID≥140 cm (inline) for the 1.0 T design. (4) The simulation of different treatment fields was identified to cause dynamic changes in the field distribution. However, the estimated residual distortion was below 1.2 mm geometric distortion at SID≥120 cm (perpendicular) and SID≥130 cm (inline) for a 10 mT/m frequency-encoding gradient. (5) Due to magnetic saturation of the MLC materials, the field distortion remained constant at B{sub 0}>1.0 T.Conclusions: This work shows that the MRI field distortions caused by the MLC cannot be ignored and must be thoroughly investigated for any MRI-linac system. The numeric distortion values obtained for our 1.0 T magnet may vary for other magnet designs with substantially different fringe fields, however the concept of modest increases in the SID to reduce the distortion to a shimmable level is generally applicable.« less

Mapping magnetic field lines between the Sun and Earth

NASA Astrophysics Data System (ADS)

Li, B.; Cairns, Iver H.; Gosling, J. T.; Steward, G.; Francis, M.; Neudegg, D.; Schulte in den Bäumen, H.; Player, P. R.; Milne, A. R.

2016-02-01

Magnetic field topologies between the Sun and Earth are important for the connectivity to Earth of solar suprathermal particles, e.g., solar energetic particles and beam electrons in type III solar radio bursts. An approach is developed for mapping large-scale magnetic field lines near the solar equatorial plane, using near-Earth observations and a solar wind model with nonzero azimuthal magnetic field at the source surface. Unlike Parker's spiral model, which restricts the in-ecliptic angle ΦB in the Geocentric Solar Ecliptic coordinates to (90°-180°, 270°-360°) and so is unable to predict field configurations for the other ΦB values frequently observed in the solar wind, our approach can account for all the observed ΦB values. A set of predicted maps shows that near both minimal and maximal solar activity the field lines are typically open and that loops with both ends either connected to or disconnected from the Sun are relatively rare. The open field lines, nonetheless, often do not closely follow the Parker spiral, being less or more tightly wound, or strongly azimuthally or radially oriented, or inverted. The time-varying classes, e.g., bidirectional electrons, of suprathermal electron pitch angle distributions (PADs) at 1 AU are predicted from the mapped field line configurations and compared with Wind observations for two solar rotations, one each near solar minimum and solar maximum. PAD predictions by our approach agree quantitatively (≈90%) with the PAD observations and outperform (by ≈20%) PAD predictions using Parker's model.

Planck intermediate results. XLIV. Structure of the Galactic magnetic field from dust polarization maps of the southern Galactic cap

NASA Astrophysics Data System (ADS)

Planck Collaboration; Aghanim, N.; Alves, M. I. R.; Arzoumanian, D.; Aumont, J.; Baccigalupi, C.; Ballardini, M.; Banday, A. J.; Barreiro, R. B.; Bartolo, N.; Basak, S.; Benabed, K.; Bernard, J.-P.; Bersanelli, M.; Bielewicz, P.; Bonavera, L.; Bond, J. R.; Borrill, J.; Bouchet, F. R.; Boulanger, F.; Bracco, A.; Bucher, M.; Burigana, C.; Calabrese, E.; Cardoso, J.-F.; Chiang, H. C.; Colombo, L. P. L.; Combet, C.; Comis, B.; Couchot, F.; Coulais, A.; Crill, B. P.; Curto, A.; Cuttaia, F.; Davis, R. J.; de Bernardis, P.; de Rosa, A.; de Zotti, G.; Delabrouille, J.; Delouis, J.-M.; Di Valentino, E.; Dickinson, C.; Diego, J. M.; Doré, O.; Douspis, M.; Ducout, A.; Dupac, X.; Dusini, S.; Efstathiou, G.; Elsner, F.; Enßlin, T. A.; Eriksen, H. K.; Falgarone, E.; Fantaye, Y.; Ferrière, K.; Finelli, F.; Frailis, M.; Fraisse, A. A.; Franceschi, E.; Frolov, A.; Galeotta, S.; Galli, S.; Ganga, K.; Génova-Santos, R. T.; Gerbino, M.; Ghosh, T.; González-Nuevo, J.; Górski, K. M.; Gratton, S.; Gregorio, A.; Gruppuso, A.; Gudmundsson, J. E.; Guillet, V.; Hansen, F. K.; Helou, G.; Henrot-Versillé, S.; Herranz, D.; Hivon, E.; Huang, Z.; Jaffe, A. H.; Jaffe, T. R.; Jones, W. C.; Keihänen, E.; Keskitalo, R.; Kisner, T. S.; Krachmalnicoff, N.; Kunz, M.; Kurki-Suonio, H.; Lagache, G.; Lähteenmäki, A.; Lamarre, J.-M.; Langer, M.; Lasenby, A.; Lattanzi, M.; Le Jeune, M.; Levrier, F.; Liguori, M.; Lilje, P. B.; López-Caniego, M.; Lubin, P. M.; Macías-Pérez, J. F.; Maggio, G.; Maino, D.; Mandolesi, N.; Mangilli, A.; Maris, M.; Martin, P. G.; Martínez-González, E.; Matarrese, S.; Mauri, N.; McEwen, J. D.; Melchiorri, A.; Mennella, A.; Migliaccio, M.; Miville-Deschênes, M.-A.; Molinari, D.; Moneti, A.; Montier, L.; Morgante, G.; Moss, A.; Naselsky, P.; Natoli, P.; Neveu, J.; Nørgaard-Nielsen, H. U.; Oppermann, N.; Oxborrow, C. A.; Pagano, L.; Paoletti, D.; Partridge, B.; Perdereau, O.; Perotto, L.; Pettorino, V.; Piacentini, F.; Plaszczynski, S.; Polenta, G.; Rachen, J. P.; Rebolo, R.; Reinecke, M.; Remazeilles, M.; Renzi, A.; Ristorcelli, I.; Rocha, G.; Rossetti, M.; Roudier, G.; Ruiz-Granados, B.; Salvati, L.; Sandri, M.; Savelainen, M.; Scott, D.; Sirignano, C.; Soler, J. D.; Suur-Uski, A.-S.; Tauber, J. A.; Tavagnacco, D.; Tenti, M.; Toffolatti, L.; Tomasi, M.; Tristram, M.; Trombetti, T.; Valiviita, J.; Vansyngel, F.; Van Tent, F.; Vielva, P.; Villa, F.; Wandelt, B. D.; Wehus, I. K.; Zacchei, A.; Zonca, A.

2016-12-01

Using data from the Planck satellite, we study the statistical properties of interstellar dust polarization at high Galactic latitudes around the south pole (b < -60°). Our aim is to advance the understanding of the magnetized interstellar medium (ISM), and to provide a modelling framework of the polarized dust foreground for use in cosmic microwave background (CMB) component-separation procedures. We examine the Stokes I, Q, and U maps at 353 GHz, and particularly the statistical distribution of the polarization fraction (p) and angle (ψ), in order to characterize the ordered and turbulent components of the Galactic magnetic field (GMF) in the solar neighbourhood. The Q and U maps show patterns at large angular scales, which we relate to the mean orientation of the GMF towards Galactic coordinates (l0,b0) = (70° ± 5°,24° ± 5°). The histogram of the observed p values shows a wide dispersion up to 25%. The histogram of ψ has a standard deviation of 12° about the regular pattern expected from the ordered GMF. We build a phenomenological model that connects the distributions of p and ψ to a statistical description of the turbulent component of the GMF, assuming a uniform effective polarization fraction (p0) of dust emission. To compute the Stokes parameters, we approximate the integration along the line of sight (LOS) as a sum over a set of N independent polarization layers, in each of which the turbulent component of the GMF is obtained from Gaussian realizations of a power-law power spectrum. We are able to reproduce the observed p and ψ distributions using a p0 value of 26%, a ratio of 0.9 between the strengths of the turbulent and mean components of the GMF, and a small value of N. The mean value of p (inferred from the fit of the large-scale patterns in the Stokes maps) is 12 ± 1%. We relate the polarization layers to the density structure and to the correlation length of the GMF along the LOS. We emphasize the simplicity of our model (involving only a few parameters), which can be easily computed on the celestial sphere to produce simulated maps of dust polarization. Our work is an important step towards a model that can be used to assess the accuracy of component-separation methods in present and future CMB experiments designed to search the B mode CMB polarization from primordial gravity waves.

Planck intermediate results: XLIV. Structure of the Galactic magnetic field from dust polarization maps of the southern Galactic cap

DOE PAGES

Aghanim, N.; Alves, M. I. R.; Arzoumanian, D.; ...

2016-12-12

Using data from the Planck satellite, we study in this paper the statistical properties of interstellar dust polarization at high Galactic latitudes around the south pole (b < -60°). Our aim is to advance the understanding of the magnetized interstellar medium (ISM), and to provide a modelling framework of the polarized dust foreground for use in cosmic microwave background (CMB) component-separation procedures. We examine the Stokes I, Q, and U maps at 353 GHz, and particularly the statistical distribution of the polarization fraction (p) and angle (ψ), in order to characterize the ordered and turbulent components of the Galactic magneticmore » field (GMF) in the solar neighbourhood. The Q and U maps show patterns at large angular scales, which we relate to the mean orientation of the GMF towards Galactic coordinates (l 0,b 0) = (70° ± 5°,24° ± 5°). The histogram of the observed p values shows a wide dispersion up to 25%. The histogram of ψ has a standard deviation of 12° about the regular pattern expected from the ordered GMF. We build a phenomenological model that connects the distributions of p and ψ to a statistical description of the turbulent component of the GMF, assuming a uniform effective polarization fraction (p 0) of dust emission. To compute the Stokes parameters, we approximate the integration along the line of sight (LOS) as a sum over a set of N independent polarization layers, in each of which the turbulent component of the GMF is obtained from Gaussian realizations of a power-law power spectrum. We are able to reproduce the observed p and ψ distributions using a p 0 value of 26%, a ratio of 0.9 between the strengths of the turbulent and mean components of the GMF, and a small value of N. The mean value of p (inferred from the fit of the large-scale patterns in the Stokes maps) is 12 ± 1%. We relate the polarization layers to the density structure and to the correlation length of the GMF along the LOS. We emphasize the simplicity of our model (involving only a few parameters), which can be easily computed on the celestial sphere to produce simulated maps of dust polarization. Finally, our work is an important step towards a model that can be used to assess the accuracy of component-separation methods in present and future CMB experiments designed to search the B mode CMB polarization from primordial gravity waves.« less

Planck intermediate results: XLIV. Structure of the Galactic magnetic field from dust polarization maps of the southern Galactic cap

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aghanim, N.; Alves, M. I. R.; Arzoumanian, D.

Using data from the Planck satellite, we study in this paper the statistical properties of interstellar dust polarization at high Galactic latitudes around the south pole (b < -60°). Our aim is to advance the understanding of the magnetized interstellar medium (ISM), and to provide a modelling framework of the polarized dust foreground for use in cosmic microwave background (CMB) component-separation procedures. We examine the Stokes I, Q, and U maps at 353 GHz, and particularly the statistical distribution of the polarization fraction (p) and angle (ψ), in order to characterize the ordered and turbulent components of the Galactic magneticmore » field (GMF) in the solar neighbourhood. The Q and U maps show patterns at large angular scales, which we relate to the mean orientation of the GMF towards Galactic coordinates (l 0,b 0) = (70° ± 5°,24° ± 5°). The histogram of the observed p values shows a wide dispersion up to 25%. The histogram of ψ has a standard deviation of 12° about the regular pattern expected from the ordered GMF. We build a phenomenological model that connects the distributions of p and ψ to a statistical description of the turbulent component of the GMF, assuming a uniform effective polarization fraction (p 0) of dust emission. To compute the Stokes parameters, we approximate the integration along the line of sight (LOS) as a sum over a set of N independent polarization layers, in each of which the turbulent component of the GMF is obtained from Gaussian realizations of a power-law power spectrum. We are able to reproduce the observed p and ψ distributions using a p 0 value of 26%, a ratio of 0.9 between the strengths of the turbulent and mean components of the GMF, and a small value of N. The mean value of p (inferred from the fit of the large-scale patterns in the Stokes maps) is 12 ± 1%. We relate the polarization layers to the density structure and to the correlation length of the GMF along the LOS. We emphasize the simplicity of our model (involving only a few parameters), which can be easily computed on the celestial sphere to produce simulated maps of dust polarization. Finally, our work is an important step towards a model that can be used to assess the accuracy of component-separation methods in present and future CMB experiments designed to search the B mode CMB polarization from primordial gravity waves.« less

Improvement of the repeatability of parallel transmission at 7T using interleaved acquisition in the calibration scan.

PubMed

Kameda, Hiroyuki; Kudo, Kohsuke; Matsuda, Tsuyoshi; Harada, Taisuke; Iwadate, Yuji; Uwano, Ikuko; Yamashita, Fumio; Yoshioka, Kunihiro; Sasaki, Makoto; Shirato, Hiroki

2017-12-04

Respiration-induced phase shift affects B 0 /B 1 + mapping repeatability in parallel transmission (pTx) calibration for 7T brain MRI, but is improved by breath-holding (BH). However, BH cannot be applied during long scans. To examine whether interleaved acquisition during calibration scanning could improve pTx repeatability and image homogeneity. Prospective. Nine healthy subjects. 7T MRI with a two-channel RF transmission system was used. Calibration scanning for B 0 /B 1 + mapping was performed under sequential acquisition/free-breathing (Seq-FB), Seq-BH, and interleaved acquisition/FB (Int-FB) conditions. The B 0 map was calculated with two echo times, and the B 1 + map was obtained using the Bloch-Siegert method. Actual flip-angle imaging (AFI) and gradient echo (GRE) imaging were performed using pTx and quadrature-Tx (qTx). All scans were acquired in five sessions. Repeatability was evaluated using intersession standard deviation (SD) or coefficient of variance (CV), and in-plane homogeneity was evaluated using in-plane CV. A paired t-test with Bonferroni correction for multiple comparisons was used. The intersession CV/SDs for the B 0 /B 1 + maps were significantly smaller in Int-FB than in Seq-FB (Bonferroni-corrected P < 0.05 for all). The intersession CVs for the AFI and GRE images were also significantly smaller in Int-FB, Seq-BH, and qTx than in Seq-FB (Bonferroni-corrected P < 0.05 for all). The in-plane CVs for the AFI and GRE images in Seq-FB, Int-FB, and Seq-BH were significantly smaller than in qTx (Bonferroni-corrected P < 0.01 for all). Using interleaved acquisition during calibration scans of pTx for 7T brain MRI improved the repeatability of B 0 /B 1 + mapping, AFI, and GRE images, without BH. 1 Technical Efficacy Stage 1 J. Magn. Reson. Imaging 2017. © 2017 International Society for Magnetic Resonance in Medicine.

Improvements in Technique of NMR Imaging and NMR Diffusion Measurements in the Presence of Background Gradients.

NASA Astrophysics Data System (ADS)

Lian, Jianyu

In this work, modification of the cosine current distribution rf coil, PCOS, has been introduced and tested. The coil produces a very homogeneous rf magnetic field, and it is inexpensive to build and easy to tune for multiple resonance frequency. The geometrical parameters of the coil are optimized to produce the most homogeneous rf field over a large volume. To avoid rf field distortion when the coil length is comparable to a quarter wavelength, a parallel PCOS coil is proposed and discussed. For testing rf coils and correcting B _1 in NMR experiments, a simple, rugged and accurate NMR rf field mapping technique has been developed. The method has been tested and used in 1D, 2D, 3D and in vivo rf mapping experiments. The method has been proven to be very useful in the design of rf coils. To preserve the linear relation between rf output applied on an rf coil and modulating input for an rf modulating -amplifying system of NMR imaging spectrometer, a quadrature feedback loop is employed in an rf modulator with two orthogonal rf channels to correct the amplitude and phase non-linearities caused by the rf components in the rf system. The modulator is very linear over a large range and it can generate an arbitrary rf shape. A diffusion imaging sequence has been developed for measuring and imaging diffusion in the presence of background gradients. Cross terms between the diffusion sensitizing gradients and background gradients or imaging gradients can complicate diffusion measurement and make the interpretation of NMR diffusion data ambiguous, but these have been eliminated in this method. Further, the background gradients has been measured and imaged. A dipole random distribution model has been established to study background magnetic fields Delta B and background magnetic gradients G_0 produced by small particles in a sample when it is in a B_0 field. From this model, the minimum distance that a spin can approach a particle can be determined by measuring and <{bf G}_sp{0 }{2}>. From this model, the particle concentration in a sample can be determined by measuring the lineshape of a free induction decay (fid).

Methotrexate, Doxorubicin, and Cisplatin (MAP) Plus Maintenance Pegylated Interferon Alfa-2b Versus MAP Alone in Patients With Resectable High-Grade Osteosarcoma and Good Histologic Response to Preoperative MAP: First Results of the EURAMOS-1 Good Response Randomized Controlled Trial

PubMed Central

Bielack, Stefan S.; Smeland, Sigbjørn; Whelan, Jeremy S.; Marina, Neyssa; Jovic, Gordana; Hook, Jane M.; Krailo, Mark D.; Gebhardt, Mark; Pápai, Zsuzsanna; Meyer, James; Nadel, Helen; Randall, R. Lor; Deffenbaugh, Claudia; Nagarajan, Rajaram; Brennan, Bernadette; Letson, G. Douglas; Teot, Lisa A.; Goorin, Allen; Baumhoer, Daniel; Kager, Leo; Werner, Mathias; Lau, Ching C.; Sundby Hall, Kirsten; Gelderblom, Hans; Meyers, Paul; Gorlick, Richard; Windhager, Reinhard; Helmke, Knut; Eriksson, Mikael; Hoogerbrugge, Peter M.; Schomberg, Paula; Tunn, Per-Ulf; Kühne, Thomas; Jürgens, Heribert; van den Berg, Henk; Böhling, Tom; Picton, Susan; Renard, Marleen; Reichardt, Peter; Gerss, Joachim; Butterfass-Bahloul, Trude; Morris, Carol; Hogendoorn, Pancras C.W.; Seddon, Beatrice; Calaminus, Gabriele; Michelagnoli, Maria; Dhooge, Catharina; Sydes, Matthew R.; Bernstein, Mark

2015-01-01

Purpose EURAMOS-1, an international randomized controlled trial, investigated maintenance therapy with pegylated interferon alfa-2b (IFN-α-2b) in patients whose osteosarcoma showed good histologic response (good response) to induction chemotherapy. Patients and Methods At diagnosis, patients age ≤ 40 years with resectable high-grade osteosarcoma were registered. Eligibility after surgery for good response random assignment included ≥ two cycles of preoperative MAP (methotrexate, doxorubicin, and cisplatin), macroscopically complete surgery of primary tumor, < 10% viable tumor, and no disease progression. These patients were randomly assigned to four additional cycles MAP with or without IFN-α-2b (0.5 to 1.0 μg/kg per week subcutaneously, after chemotherapy until 2 years postregistration). Outcome measures were event-free survival (EFS; primary) and overall survival and toxicity (secondary). Results Good response was reported in 1,041 of 2,260 registered patients; 716 consented to random assignment (MAP, n = 359; MAP plus IFN-α-2b, n = 357), with baseline characteristics balanced by arm. A total of 271 of 357 started IFN-α-2b; 105 stopped early, and 38 continued to receive treatment at data freeze. Refusal and toxicity were the main reasons for never starting IFN-α-2b and for stopping prematurely, respectively. Median IFN-α-2b duration, if started, was 67 weeks. A total of 133 of 268 patients who started IFN-α-2b and provided toxicity information reported grade ≥ 3 toxicity during IFN-α-2b treatment. With median follow-up of 44 months, 3-year EFS for all 716 randomly assigned patients was 76% (95% CI, 72% to 79%); 174 EFS events were reported (MAP, n = 93; MAP plus IFN-α-2b, n = 81). Hazard ratio was 0.83 (95% CI, 0.61 to 1.12; P = .214) from an adjusted Cox model. Conclusion At the preplanned analysis time, MAP plus IFN-α-2b was not statistically different from MAP alone. A considerable proportion of patients never started IFN-α-2b or stopped prematurely. Long-term follow-up for events and survival continues. PMID:26033801

Diagnostic Ability of Wide-field Retinal Nerve Fiber Layer Maps Using Swept-Source Optical Coherence Tomography for Detection of Preperimetric and Early Perimetric Glaucoma.

PubMed

Lee, Won June; Na, Kyeong Ik; Kim, Young Kook; Jeoung, Jin Wook; Park, Ki Ho

2017-06-01

To evaluate the diagnostic ability of wide-field retinal nerve fiber layer (RNFL) maps with swept-source optical coherence tomography (SS-OCT) for detection of preperimetric (PPG) and early perimetric glaucoma (EG). One hundred eighty-four eyes, including 67 healthy eyes, 43 eyes with PPG, and 74 eyes with EG, were analyzed. Patients underwent a comprehensive ocular examination including red-free RNFL photography, visual field testing and wide-field SS-OCT scanning (DRI-OCT-1 Atlantis; Topcon, Tokyo, Japan). SS-OCT provides a wide-field RNFL thickness map and a SuperPixel map, which are composed of the RNFL deviation map of the peripapillary area and the deviation map of the composition of the ganglion cell layer with the inner plexiform layer and RNFL (GC-IPL+RNFL) in the macular area. The ability to discriminate PPG and EG from healthy eyes was assessed using sensitivity, specificity, and area under the receiver operating characteristic curve (AUC) for all parameters and criteria provided by the wide-field SS-OCT scan. The wide-field RNFL thickness map using SS-OCT showed the highest sensitivity of PPG-diagnostic and EG-diagnostic performance compared with the other SS-OCT criteria based on the internal normative base (93.0 and 97.3%, respectively). Among the SS-OCT continuous parameters, the RFNL thickness of the 7 clock-hour, inferior and inferotemporal macular ganglion cell analyses showed the largest AUC of PPG-diagnostic and EG-diagnostic performance (AUC=0.809 to 0.865). The wide-field RNFL thickness map using SS-OCT performed well in distinguishing eyes with PPG and EG from healthy eyes. In the clinical setting, wide-field RNFL maps of SS-OCT can be useful tools for detection of early-stage glaucoma.

Optimization of Scan Parameters to Reduce Acquisition Time for Diffusion Kurtosis Imaging at 1.5T.

PubMed

Yokosawa, Suguru; Sasaki, Makoto; Bito, Yoshitaka; Ito, Kenji; Yamashita, Fumio; Goodwin, Jonathan; Higuchi, Satomi; Kudo, Kohsuke

2016-01-01

To shorten acquisition of diffusion kurtosis imaging (DKI) in 1.5-tesla magnetic resonance (MR) imaging, we investigated the effects of the number of b-values, diffusion direction, and number of signal averages (NSA) on the accuracy of DKI metrics. We obtained 2 image datasets with 30 gradient directions, 6 b-values up to 2500 s/mm(2), and 2 signal averages from 5 healthy volunteers and generated DKI metrics, i.e., mean, axial, and radial kurtosis (MK, K∥, and K⊥) maps, from various combinations of the datasets. These maps were estimated by using the intraclass correlation coefficient (ICC) with those from the full datasets. The MK and K⊥ maps generated from the datasets including only the b-value of 2500 s/mm(2) showed excellent agreement (ICC, 0.96 to 0.99). Under the same acquisition time and diffusion directions, agreement was better of MK, K∥, and K⊥ maps obtained with 3 b-values (0, 1000, and 2500 s/mm(2)) and 4 signal averages than maps obtained with any other combination of numbers of b-value and varied NSA. Good agreement (ICC > 0.6) required at least 20 diffusion directions in all the metrics. MK and K⊥ maps with ICC greater than 0.95 can be obtained at 1.5T within 10 min (b-value = 0, 1000, and 2500 s/mm(2); 20 diffusion directions; 4 signal averages; slice thickness, 6 mm with no interslice gap; number of slices, 12).

Noncommutative gauge theories and Kontsevich's formality theorem

NASA Astrophysics Data System (ADS)

Jurčo, B.; Schupp, P.; Wess, J.

2001-09-01

The equivalence of star products that arise from the background field with and without fluctuations and Kontsevich's formality theorem allow an explicitly construction of a map that relates ordinary gauge theory and noncommutative gauge theory (Seiberg-Witten map.) Using noncommutative extra dimensions the construction is extended to noncommutative nonabelian gauge theory for arbitrary gauge groups; as a byproduct we obtain a "Mini Seiberg-Witten map" that explicitly relates ordinary abelian and nonabelian gauge fields. All constructions are also valid for non-constant B-field, and even more generally for any Poisson tensor.

Probing the statistical properties of CMB B-mode polarization through Minkowski functionals

NASA Astrophysics Data System (ADS)

Santos, Larissa; Wang, Kai; Zhao, Wen

2016-07-01

The detection of the magnetic type B-mode polarization is the main goal of future cosmic microwave background (CMB) experiments. In the standard model, the B-mode map is a strong non-gaussian field due to the CMB lensing component. Besides the two-point correlation function, the other statistics are also very important to dig the information of the polarization map. In this paper, we employ the Minkowski functionals to study the morphological properties of the lensed B-mode maps. We find that the deviations from Gaussianity are very significant for both full and partial-sky surveys. As an application of the analysis, we investigate the morphological imprints of the foreground residuals in the B-mode map. We find that even for very tiny foreground residuals, the effects on the map can be detected by the Minkowski functional analysis. Therefore, it provides a complementary way to investigate the foreground contaminations in the CMB studies.

Quantitative Susceptibility Mapping by Inversion of a Perturbation Field Model: Correlation with Brain Iron in Normal Aging

PubMed Central

Poynton, Clare; Jenkinson, Mark; Adalsteinsson, Elfar; Sullivan, Edith V.; Pfefferbaum, Adolf; Wells, William

2015-01-01

There is increasing evidence that iron deposition occurs in specific regions of the brain in normal aging and neurodegenerative disorders such as Parkinson's, Huntington's, and Alzheimer's disease. Iron deposition changes the magnetic susceptibility of tissue, which alters the MR signal phase, and allows estimation of susceptibility differences using quantitative susceptibility mapping (QSM). We present a method for quantifying susceptibility by inversion of a perturbation model, or ‘QSIP’. The perturbation model relates phase to susceptibility using a kernel calculated in the spatial domain, in contrast to previous Fourier-based techniques. A tissue/air susceptibility atlas is used to estimate B0 inhomogeneity. QSIP estimates in young and elderly subjects are compared to postmortem iron estimates, maps of the Field-Dependent Relaxation Rate Increase (FDRI), and the L1-QSM method. Results for both groups showed excellent agreement with published postmortem data and in-vivo FDRI: statistically significant Spearman correlations ranging from Rho = 0.905 to Rho = 1.00 were obtained. QSIP also showed improvement over FDRI and L1-QSM: reduced variance in susceptibility estimates and statistically significant group differences were detected in striatal and brainstem nuclei, consistent with age-dependent iron accumulation in these regions. PMID:25248179

Designing and Testing a UAV Mapping System for Agricultural Field Surveying

PubMed Central

Skovsen, Søren

2017-01-01

A Light Detection and Ranging (LiDAR) sensor mounted on an Unmanned Aerial Vehicle (UAV) can map the overflown environment in point clouds. Mapped canopy heights allow for the estimation of crop biomass in agriculture. The work presented in this paper contributes to sensory UAV setup design for mapping and textual analysis of agricultural fields. LiDAR data are combined with data from Global Navigation Satellite System (GNSS) and Inertial Measurement Unit (IMU) sensors to conduct environment mapping for point clouds. The proposed method facilitates LiDAR recordings in an experimental winter wheat field. Crop height estimates ranging from 0.35–0.58 m are correlated to the applied nitrogen treatments of 0–300 kgNha. The LiDAR point clouds are recorded, mapped, and analysed using the functionalities of the Robot Operating System (ROS) and the Point Cloud Library (PCL). Crop volume estimation is based on a voxel grid with a spatial resolution of 0.04 × 0.04 × 0.001 m. Two different flight patterns are evaluated at an altitude of 6 m to determine the impacts of the mapped LiDAR measurements on crop volume estimations. PMID:29168783

Designing and Testing a UAV Mapping System for Agricultural Field Surveying.

PubMed

Christiansen, Martin Peter; Laursen, Morten Stigaard; Jørgensen, Rasmus Nyholm; Skovsen, Søren; Gislum, René

2017-11-23

A Light Detection and Ranging (LiDAR) sensor mounted on an Unmanned Aerial Vehicle (UAV) can map the overflown environment in point clouds. Mapped canopy heights allow for the estimation of crop biomass in agriculture. The work presented in this paper contributes to sensory UAV setup design for mapping and textual analysis of agricultural fields. LiDAR data are combined with data from Global Navigation Satellite System (GNSS) and Inertial Measurement Unit (IMU) sensors to conduct environment mapping for point clouds. The proposed method facilitates LiDAR recordings in an experimental winter wheat field. Crop height estimates ranging from 0.35-0.58 m are correlated to the applied nitrogen treatments of 0-300 kg N ha . The LiDAR point clouds are recorded, mapped, and analysed using the functionalities of the Robot Operating System (ROS) and the Point Cloud Library (PCL). Crop volume estimation is based on a voxel grid with a spatial resolution of 0.04 × 0.04 × 0.001 m. Two different flight patterns are evaluated at an altitude of 6 m to determine the impacts of the mapped LiDAR measurements on crop volume estimations.

A study of the usefulness of Skylab EREP data for earth resources studies in Australia

NASA Technical Reports Server (NTRS)

Lambert, B. P.; Benson, M. L.; Borough, C. J.; Myers, B. J.; Maffi, C. E.; Simpson, C. J.; Perry, W. J.; Burns, K. L.; Shepherd, J.; Beattie, R. (Principal Investigator)

1975-01-01

The author has identified the following significant results. In subhumid, vegetated areas, S190B photography: (1) has a potentially operational role in detecting lineaments in 1:100,000 scale geological mapping and in major civil engineering surveys; (2) is of limited value for regional lithological mapping at 1:500,000 scale; and (3) provided much useful synoptic information and some detailed information of direct value to the mapping of nonmineral natural resources such as vegetation, land soil, and water. In arid, well exposed areas, S190B photography could be used: (1) with a limited amount of field traverses, to produce reliable 1:500,000 scale geological maps of sedimentary sequences; (2) to update superficial geology on 1:250,000 scale maps; and (3) together with the necessary field studies, to prepare landform, soil, and vegetation maps at 1:1,000,000 scale. Skylab photography was found to be more useful than LANDSAT images for small scale mapping of geology and land types, and for the revision of topographic maps at 1:100,000 scale, because of superior spatial resolution and stereoscopic coverage.

New formulae for magnetic relative helicity and field line helicity

NASA Astrophysics Data System (ADS)

Aly, Jean-Jacques

2018-01-01

We consider a magnetic field {B} occupying the simply connected domain D and having all its field lines tied to the boundary S of D. We assume here that {B} has a simple topology, i.e., the mapping {M} from positive to negative polarity areas of S associating to each other the two footpoints of any magnetic line, is continuous. We first present new formulae for the helicity H of {B} relative to a reference field {{B}}r having the same normal component {B}n on S, and for its field line helicity h relative to a reference vector potential {{C}}r of {{B}}r. These formulae make immediately apparent the well known invariance of these quantities under all the ideal MHD deformations that preserve the positions of the footpoints on S. They express indeed h and H either in terms of {M} and {B}n, or in terms of the values on S of a pair of Euler potentials of {B}. We next show that, for a specific choice of {{C}}r, the field line helicity h of {B} fully characterizes the magnetic mapping {M} and then the topology of the lines. Finally, we give a formula that describes the rate of change of h in a situation where the plasma moves on the perfectly conducting boundary S without changing {B}n and/or non-ideal processes, described by an unspecified term {N} in Ohm’s law, are at work in some parts of D.

Sound pressure distribution and power flow within the gerbil ear canal from 100 Hz to 80 kHz

PubMed Central

Ravicz, Michael E.; Olson, Elizabeth S.; Rosowski, John J.

2008-01-01

Sound pressure was mapped in the bony ear canal of gerbils during closed-field sound stimulation at frequencies from 0.1 to 80 kHz. A 1.27-mm-diam probe-tube microphone or a 0.17-mm-diam fiber-optic miniature microphone was positioned along approximately longitudinal trajectories within the 2.3-mm-diam ear canal. Substantial spatial variations in sound pressure, sharp minima in magnitude, and half-cycle phase changes occurred at frequencies >30 kHz. The sound frequencies of these transitions increased with decreasing distance from the tympanic membrane (TM). Sound pressure measured orthogonally across the surface of the TM showed only small variations at frequencies below 60 kHz. Hence, the ear canal sound field can be described fairly well as a one-dimensional standing wave pattern. Ear-canal power reflectance estimated from longitudinal spatial variations was roughly constant at 0.2–0.5 at frequencies between 30 and 45 kHz. In contrast, reflectance increased at higher frequencies to at least 0.8 above 60 kHz. Sound pressure was also mapped in a microphone-terminated uniform tube—an “artificial ear.” Comparison with ear canal sound fields suggests that an artificial ear or “artificial cavity calibration” technique may underestimate the in situ sound pressure by 5–15 dB between 40 and 60 kHz. PMID:17902852

Direct magnetic field estimation based on echo planar raw data.

PubMed

Testud, Frederik; Splitthoff, Daniel Nicolas; Speck, Oliver; Hennig, Jürgen; Zaitsev, Maxim

2010-07-01

Gradient recalled echo echo planar imaging is widely used in functional magnetic resonance imaging. The fast data acquisition is, however, very sensitive to field inhomogeneities which manifest themselves as artifacts in the images. Typically used correction methods have the common deficit that the data for the correction are acquired only once at the beginning of the experiment, assuming the field inhomogeneity distribution B(0) does not change over the course of the experiment. In this paper, methods to extract the magnetic field distribution from the acquired k-space data or from the reconstructed phase image of a gradient echo planar sequence are compared and extended. A common derivation for the presented approaches provides a solid theoretical basis, enables a fair comparison and demonstrates the equivalence of the k-space and the image phase based approaches. The image phase analysis is extended here to calculate the local gradient in the readout direction and improvements are introduced to the echo shift analysis, referred to here as "k-space filtering analysis." The described methods are compared to experimentally acquired B(0) maps in phantoms and in vivo. The k-space filtering analysis presented in this work demonstrated to be the most sensitive method to detect field inhomogeneities.

Schmidt boundaries of foliated space-times

NASA Astrophysics Data System (ADS)

Barletta, Elisabetta; Dragomir, Sorin; Magliaro, Marco

2014-10-01

For every (p+q)-dimensional foliated Lorentzian manifold (M, g, F), where F is a codimension q space-like foliation, we build its Q-completion \\bar{M} and Q-boundary {{\\partial }Q}M. These are analogs, within transverse Lorentzian geometry of foliated manifolds, to the b-completion and b-boundary \\dot{M} (due to (Schmidt 1971 Gen. Relativ. Gravit. 1 269-80)). The bundle morphism {{h}\\bot }:O(M,F,g)\\to O(F,{{g}Q}) (mapping the o(p)+o(1,q-1)-component of the Levi-Civita connection 1-form of (M,g) into the unique torsion-free adapted connection on the bundle of Lorentzian transverse orthonormal frames) is shown to induce a surjective continuous map \\partial {{h}\\bot }:{{\\partial }adt}M\\to {{\\partial }Q}M of the adapted boundary ({{\\partial }adt}M\\subset \\dot{M}) of M onto its Q-boundary. Map \\partial {{h}\\bot } is used to characterize {{\\partial }Q}M as the set of end points {{lim }t\\to {{1-}}}γ (t), in the topology of \\bar{M}, of all Q-incomplete curves γ :[0,1)\\to M. As an application we determine a class {{(\\partial {{h}\\bot })}-1}(P)\\subset \\dot{M} of b-boundary points, where M={R}× (0,m)× {{S}2}, g is Schwartzschild's metric, and F is the codimension two foliation tangent to the Killing vector fields \\partial /\\partial t and \\partial /\\partial \\varphi .

Probing the magnetic field dependence of the light hole transition in GaAs/AlGaAs quantum wells using optically pumped NMR

NASA Astrophysics Data System (ADS)

Willmering, Matthew M.; Sesti, Erika L.; Hayes, Sophia E.; Wood, Ryan M.; Bowers, Clifford R.; Thapa, Sunil K.; Stanton, Christopher J.; Reyes, Arneil P.; Kuhns, Philip; McGill, Stephen

2018-02-01

Optically pumped NMR (OPNMR) of the NMR-active Ga/7169 species has been shown to be a unique method to probe electronic energy bands in GaAs, with sensitivity to the light hole-to-conduction band transition. This transition is often obscured in other optical measurements such as magnetoabsorption. Using OPNMR, we exploit the hyperfine interaction between conduction band electrons (and their spin states) and nuclear spins, which are detected through phase-sensitive radio-frequency (NMR) spectroscopy. Measurements were made over a range of external magnetic fields (B0) in two different labs with separate experimental setups to obtain the magnetic field dependence of the light hole-to-conduction band transition energy. In addition, k .p theory was used to interpret the experimental results, mapping out this specific transition's magnetic field dependence in an AlGaAs/GaAs quantum well. The combination of theory and experiment point to a mixing of valence bands at a field of approximately B0=4.7 T, swapping the dominant character of the absorption transition and, thus, explaining the magnetic field dependence. Lastly, the experimental dependence of the light hole-to-conduction band transition energy on B0 is found to be less steep compared to the calculated trend, indicating that inclusion of additional effects may be necessary to accurately model the spin-split band structure. The additional insight gained by Ga/7169 OPNMR about the light hole states will facilitate future testing of more complex band structure models.

A global map of rainfed cropland areas (GMRCA) at the end of last millennium using remote sensing

USGS Publications Warehouse

Biradar, C.M.; Thenkabail, P.S.; Noojipady, P.; Li, Y.; Dheeravath, V.; Turral, H.; Velpuri, M.; Gumma, M.K.; Gangalakunta, O.R.P.; Cai, X.L.; Xiao, X.; Schull, M.A.; Alankara, R.D.; Gunasinghe, S.; Mohideen, S.

2009-01-01

The overarching goal of this study was to produce a global map of rainfed cropland areas (GMRCA) and calculate country-by-country rainfed area statistics using remote sensing data. A suite of spatial datasets, methods and protocols for mapping GMRCA were described. These consist of: (a) data fusion and composition of multi-resolution time-series mega-file data-cube (MFDC), (b) image segmentation based on precipitation, temperature, and elevation zones, (c) spectral correlation similarity (SCS), (d) protocols for class identification and labeling through uses of SCS R2-values, bi-spectral plots, space-time spiral curves (ST-SCs), rich source of field-plot data, and zoom-in-views of Google Earth (GE), and (e) techniques for resolving mixed classes by decision tree algorithms, and spatial modeling. The outcome was a 9-class GMRCA from which country-by-country rainfed area statistics were computed for the end of the last millennium. The global rainfed cropland area estimate from the GMRCA 9-class map was 1.13 billion hectares (Bha). The total global cropland areas (rainfed plus irrigated) was 1.53 Bha which was close to national statistics compiled by FAOSTAT (1.51 Bha). The accuracies and errors of GMRCA were assessed using field-plot and Google Earth data points. The accuracy varied between 92 and 98% with kappa value of about 0.76, errors of omission of 2-8%, and the errors of commission of 19-36%. ?? 2008 Elsevier B.V.

Electric field-mediated transport of plasmid DNA in tumor interstitium in vivo.

PubMed

Henshaw, Joshua W; Zaharoff, David A; Mossop, Brian J; Yuan, Fan

2007-11-01

Local pulsed electric field application is a method for improving non-viral gene delivery. Mechanisms of the improvement include electroporation and electrophoresis. To understand how electrophoresis affects pDNA delivery in vivo, we quantified the magnitude of electric field-induced interstitial transport of pDNA in 4T1 and B16.F10 tumors implanted in mouse dorsal skin-fold chambers. Four different electric pulse sequences were used in this study, each consisted of 10 identical pulses that were 100 or 400 V/cm in strength and 20 or 50 ms in duration. The interval between consecutive pulses was 1 s. The largest distance of transport was obtained with the 400 V/cm and 50 ms pulse, and was 0.23 and 0.22 microm/pulse in 4T1 and B16.F10 tumors, respectively. There were no significant differences in transport distances between 4T1 and B16.F10 tumors. Results from in vivo mapping and numerical simulations revealed an approximately uniform intratumoral electric field that was predominantly in the direction of the applied field. The data in the study suggested that interstitial transport of pDNA induced by a sequence of ten electric pulses was ineffective for macroscopic delivery of genes in tumors. However, the induced transport was more efficient than passive diffusion.

Single-shot spiral imaging enabled by an expanded encoding model: Demonstration in diffusion MRI.

PubMed

Wilm, Bertram J; Barmet, Christoph; Gross, Simon; Kasper, Lars; Vannesjo, S Johanna; Haeberlin, Max; Dietrich, Benjamin E; Brunner, David O; Schmid, Thomas; Pruessmann, Klaas P

2017-01-01

The purpose of this work was to improve the quality of single-shot spiral MRI and demonstrate its application for diffusion-weighted imaging. Image formation is based on an expanded encoding model that accounts for dynamic magnetic fields up to third order in space, nonuniform static B 0 , and coil sensitivity encoding. The encoding model is determined by B 0 mapping, sensitivity mapping, and concurrent field monitoring. Reconstruction is performed by iterative inversion of the expanded signal equations. Diffusion-tensor imaging with single-shot spiral readouts is performed in a phantom and in vivo, using a clinical 3T instrument. Image quality is assessed in terms of artefact levels, image congruence, and the influence of the different encoding factors. Using the full encoding model, diffusion-weighted single-shot spiral imaging of high quality is accomplished both in vitro and in vivo. Accounting for actual field dynamics, including higher orders, is found to be critical to suppress blurring, aliasing, and distortion. Enhanced image congruence permitted data fusion and diffusion tensor analysis without coregistration. Use of an expanded signal model largely overcomes the traditional vulnerability of spiral imaging with long readouts. It renders single-shot spirals competitive with echo-planar readouts and thus deploys shorter echo times and superior readout efficiency for diffusion imaging and further prospective applications. Magn Reson Med 77:83-91, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Extinction Map of Baade's Window

NASA Astrophysics Data System (ADS)

Stanek, K. Z.

1996-03-01

Recently Wozniak & Stanek proposed a new method to investigate interstellar extinction, based on two-band photometry, which uses red clump stars as a means to construct the reddening curve. I apply this method to the color-magnitude diagrams obtained by the Optical Gravitational Lensing Experiment to construct an extinction map of a 40' x 40' region of Baade's window, with resolution of ~30". Such a map should be useful for studies of this frequently observed region of the Galactic bulge. The map and software useful for its applications are available via anonymous ftp. The total extinction AV varies from 1.26 to 2.79 mag within the 40' x 40' field of view centered on ( alpha 2000, delta 2000) = (18:03:20.9, -30:02:06), i.e., (l, b) = (1.001, -3.885). The ratio AV/E(V - I) = 2.49 +/- 0.02 is determined with this new method.

Analytical three-point Dixon method: With applications for spiral water-fat imaging.

PubMed

Wang, Dinghui; Zwart, Nicholas R; Li, Zhiqiang; Schär, Michael; Pipe, James G

2016-02-01

The goal of this work is to present a new three-point analytical approach with flexible even or uneven echo increments for water-fat separation and to evaluate its feasibility with spiral imaging. Two sets of possible solutions of water and fat are first found analytically. Then, two field maps of the B0 inhomogeneity are obtained by linear regression. The initial identification of the true solution is facilitated by the root-mean-square error of the linear regression and the incorporation of a fat spectrum model. The resolved field map after a region-growing algorithm is refined iteratively for spiral imaging. The final water and fat images are recalculated using a joint water-fat separation and deblurring algorithm. Successful implementations were demonstrated with three-dimensional gradient-echo head imaging and single breathhold abdominal imaging. Spiral, high-resolution T1 -weighted brain images were shown with comparable sharpness to the reference Cartesian images. With appropriate choices of uneven echo increments, it is feasible to resolve the aliasing of the field map voxel-wise. High-quality water-fat spiral imaging can be achieved with the proposed approach. © 2015 Wiley Periodicals, Inc.

BICEP2 / Keck Array IX: New bounds on anisotropies of CMB polarization rotation and implications for axionlike particles and primordial magnetic fields

NASA Astrophysics Data System (ADS)

BICEP2 Collaboration; Keck Array Collaboration; Ade, P. A. R.; Ahmed, Z.; Aikin, R. W.; Alexander, K. D.; Barkats, D.; Benton, S. J.; Bischoff, C. A.; Bock, J. J.; Bowens-Rubin, R.; Brevik, J. A.; Buder, I.; Bullock, E.; Buza, V.; Connors, J.; Crill, B. P.; Duband, L.; Dvorkin, C.; Filippini, J. P.; Fliescher, S.; Germaine, T. St.; Ghosh, T.; Grayson, J.; Harrison, S.; Hildebrandt, S. R.; Hilton, G. C.; Hui, H.; Irwin, K. D.; Kang, J.; Karkare, K. S.; Karpel, E.; Kaufman, J. P.; Keating, B. G.; Kefeli, S.; Kernasovskiy, S. A.; Kovac, J. M.; Kuo, C. L.; Larson, N.; Leitch, E. M.; Megerian, K. G.; Moncelsi, L.; Namikawa, T.; Netterfield, C. B.; Nguyen, H. T.; O'Brient, R.; Ogburn, R. W.; Pryke, C.; Richter, S.; Schillaci, A.; Schwarz, R.; Sheehy, C. D.; Staniszewski, Z. K.; Steinbach, B.; Sudiwala, R. V.; Teply, G. P.; Thompson, K. L.; Tolan, J. E.; Tucker, C.; Turner, A. D.; Vieregg, A. G.; Weber, A. C.; Wiebe, D. V.; Willmert, J.; Wong, C. L.; Wu, W. L. K.; Yoon, K. W.

2017-11-01

We present the strongest constraints to date on anisotropies of cosmic microwave background (CMB) polarization rotation derived from 150 GHz data taken by the BICEP2 & Keck Array CMB experiments up to and including the 2014 observing season (BK14). The definition of the polarization angle in BK14 maps has gone through self-calibration in which the overall angle is adjusted to minimize the observed T B and E B power spectra. After this procedure, the Q U maps lose sensitivity to a uniform polarization rotation but are still sensitive to anisotropies of polarization rotation. This analysis places constraints on the anisotropies of polarization rotation, which could be generated by CMB photons interacting with axionlike pseudoscalar fields or Faraday rotation induced by primordial magnetic fields. The sensitivity of BK14 maps (˜3 μ K -arc min ) makes it possible to reconstruct anisotropies of the polarization rotation angle and measure their angular power spectrum much more precisely than previous attempts. Our data are found to be consistent with no polarization rotation anisotropies, improving the upper bound on the amplitude of the rotation angle spectrum by roughly an order of magnitude compared to the previous best constraints. Our results lead to an order of magnitude better constraint on the coupling constant of the Chern-Simons electromagnetic term ga γ≤7.2 ×10-2/HI (95% confidence) than the constraint derived from the B -mode spectrum, where HI is the inflationary Hubble scale. This constraint leads to a limit on the decay constant of 10-6≲fa/Mpl at mass range of 10-33≤ma≤10-28 eV for r =0.01 , assuming ga γ˜α /(2 π fa) with α denoting the fine structure constant. The upper bound on the amplitude of the primordial magnetic fields is 30 nG (95% confidence) from the polarization rotation anisotropies.

Dual-pathway multi-echo sequence for simultaneous frequency and T2 mapping

NASA Astrophysics Data System (ADS)

Cheng, Cheng-Chieh; Mei, Chang-Sheng; Duryea, Jeffrey; Chung, Hsiao-Wen; Chao, Tzu-Cheng; Panych, Lawrence P.; Madore, Bruno

2016-04-01

Purpose: To present a dual-pathway multi-echo steady state sequence and reconstruction algorithm to capture T2, T2∗ and field map information. Methods: Typically, pulse sequences based on spin echoes are needed for T2 mapping while gradient echoes are needed for field mapping, making it difficult to jointly acquire both types of information. A dual-pathway multi-echo pulse sequence is employed here to generate T2 and field maps from the same acquired data. The approach might be used, for example, to obtain both thermometry and tissue damage information during thermal therapies, or susceptibility and T2 information from a same head scan, or to generate bonus T2 maps during a knee scan. Results: Quantitative T2, T2∗ and field maps were generated in gel phantoms, ex vivo bovine muscle, and twelve volunteers. T2 results were validated against a spin-echo reference standard: A linear regression based on ROI analysis in phantoms provided close agreement (slope/R2 = 0.99/0.998). A pixel-wise in vivo Bland-Altman analysis of R2 = 1/T2 showed a bias of 0.034 Hz (about 0.3%), as averaged over four volunteers. Ex vivo results, with and without motion, suggested that tissue damage detection based on T2 rather than temperature-dose measurements might prove more robust to motion. Conclusion: T2, T2∗ and field maps were obtained simultaneously, from the same datasets, in thermometry, susceptibility-weighted imaging and knee-imaging contexts.

Adaptive radiotherapy for NSCLC patients: utilizing the principle of energy conservation to evaluate dose mapping operations

NASA Astrophysics Data System (ADS)

Zhong, Hualiang; Chetty, Indrin J.

2017-06-01

Tumor regression during the course of fractionated radiotherapy confounds the ability to accurately estimate the total dose delivered to tumor targets. Here we present a new criterion to improve the accuracy of image intensity-based dose mapping operations for adaptive radiotherapy for patients with non-small cell lung cancer (NSCLC). Six NSCLC patients were retrospectively investigated in this study. An image intensity-based B-spline registration algorithm was used for deformable image registration (DIR) of weekly CBCT images to a reference image. The resultant displacement vector fields were employed to map the doses calculated on weekly images to the reference image. The concept of energy conservation was introduced as a criterion to evaluate the accuracy of the dose mapping operations. A finite element method (FEM)-based mechanical model was implemented to improve the performance of the B-Spline-based registration algorithm in regions involving tumor regression. For the six patients, deformed tumor volumes changed by 21.2  ±  15.0% and 4.1  ±  3.7% on average for the B-Spline and the FEM-based registrations performed from fraction 1 to fraction 21, respectively. The energy deposited in the gross tumor volume (GTV) was 0.66 Joules (J) per fraction on average. The energy derived from the fractional dose reconstructed by the B-spline and FEM-based DIR algorithms in the deformed GTV’s was 0.51 J and 0.64 J, respectively. Based on landmark comparisons for the 6 patients, mean error for the FEM-based DIR algorithm was 2.5  ±  1.9 mm. The cross-correlation coefficient between the landmark-measured displacement error and the loss of radiation energy was  -0.16 for the FEM-based algorithm. To avoid uncertainties in measuring distorted landmarks, the B-Spline-based registrations were compared to the FEM registrations, and their displacement differences equal 4.2  ±  4.7 mm on average. The displacement differences were correlated to their relative loss of radiation energy with a cross-correlation coefficient equal to 0.68. Based on the principle of energy conservation, the FEM-based mechanical model has a better performance than the B-Spline-based DIR algorithm. It is recommended that the principle of energy conservation be incorporated into a comprehensive QA protocol for adaptive radiotherapy.

Multisensor on-the-go mapping of readily dispersible clay, particle size and soil organic matter

NASA Astrophysics Data System (ADS)

Debaene, Guillaume; Niedźwiecki, Jacek; Papierowska, Ewa

2016-04-01

Particle size fractions affect strongly the physical and chemical properties of soil. Readily dispersible clay (RDC) is the part of the clay fraction in soils that is easily or potentially dispersible in water when small amounts of mechanical energy are applied to soil. The amount of RDC in the soil is of significant importance for agriculture and environment because clay dispersion is a cause of poor soil stability in water which in turn contributes to soil erodibility, mud flows, and cementation. To obtain a detailed map of soil texture, many samples are needed. Moreover, RDC determination is time consuming. The use of a mobile visible and near-infrared (VIS-NIR) platform is proposed here to map those soil properties and obtain the first detailed map of RDC at field level. Soil properties prediction was based on calibration model developed with 10 representative samples selected by a fuzzy logic algorithm. Calibration samples were analysed for soil texture (clay, silt and sand), RDC and soil organic carbon (SOC) using conventional wet chemistry analysis. Moreover, the Veris mobile sensor platform is also collecting electrical conductivity (EC) data (deep and shallow), and soil temperature. These auxiliary data were combined with VIS-NIR measurement (data fusion) to improve prediction results. EC maps were also produced to help understanding RDC data. The resulting maps were visually compared with an orthophotography of the field taken at the beginning of the plant growing season. Models were developed with partial least square regression (PLSR) and support vector machine regression (SVMR). There were no significant differences between calibration using PLSR or SVMR. Nevertheless, the best models were obtained with PLSR and standard normal variate (SNV) pretreatment and the fusion with deep EC data (e.g. for RDC and clay content: RMSECV = 0,35% and R2 = 0,71; RMSECV = 0,32% and R2 = 0,73 respectively). The best models were used to predict soil properties from the field spectra collected with the VIS-NIR platform. Maps of soil properties were generated using natural neighbour (NN) interpolation. Calibration results were satisfactory for all soil properties and allowed for the generation of detailed maps. The spatial variability of RDC was in accordance with the field orthophotography. Areas of high RDC content were corresponding to area of bad plant development. Soil texture has been correctly predicted by VIS-NIR spectroscopy (laboratory or on-the-go) before. However, readily dispersible clay (an important parameter for soil stability) has never been investigated before. This study introduces the possibility of using VIS-NIR for predicting readily dispersible clay at field level. The results obtained could be used in preventing soil erosion. Acknowledgement: This research was financed by a National Science Centre grant (NCN - Poland) with decision number UMO-2012/07/B/ST10/04387

Methods for enhancing mapping of thermal fronts in oil recovery

DOEpatents

Lee, David O.; Montoya, Paul C.; Wayland, Jr., James R.

1987-01-01

A method for enhancing the resistivity contrasts of a thermal front in an oil recovery production field as measured by the CSAMT technique is disclosed. This method includes the steps of: (a) preparing a CSAMT-determined topological resistivity map of the production field; (b) introducing a solution of a dopant material into the production field at a concentration effective to alter the resistivity associated with the thermal front; said dopant material having a high cation exchange capacity which might be selected from the group consisting of montmorillonite, illite, and chlorite clays; said material being soluble in the connate water of the production field; (c) preparing a CSAMT-determined topological resistivity map of the production field while said dopant material is moving therethrough; and (d) mathematically comparing the maps from step (a) and step (c) to determine the location of the thermal front. This method is effective with the steam flood, fire flood and water flood techniques.

Interpretive geologic bedrock map of the Tanana B-1 Quadrangle, Central Alaska

USGS Publications Warehouse

Reifenstuh, Rocky R.; Dover, James H.; Newberry, Rainer J.; Calutice, Karen H.; Liss, Shirley A.; Blodgett, Robert B.; Budtzen, Thomas K.; Weber, Florence R.

1997-01-01

This report provides detailed (1:63,360-scale) mapping of the Tanana B-1 Quadrangle (250 square miles; equivalent to four 7.5 minute quadrangles). The area is part of the Manley Hot Springs-Tofty mining districts and adjacent to the Rampart mining district to the north of the Tanana A-1 and A-2 Quadrangles. This report includes detailed bedrock, structural, stratigraphic, and geochronologic data. Based on the resulting geologic maps, field investigations, and laboratory materials analyses, the project has also generated derivative maps of geologic construction materials and geologic hazards.

Chemical-exchange-saturation-transfer magnetic resonance imaging to map gamma-aminobutyric acid, glutamate, myoinositol, glycine, and asparagine: Phantom experiments

NASA Astrophysics Data System (ADS)

Oh, Jang-Hoon; Kim, Hyug-Gi; Woo, Dong-Cheol; Jeong, Ha-Kyu; Lee, Soo Yeol; Jahng, Geon-Ho

2017-03-01

The physical and technical development of chemical-exchange-saturation-transfer (CEST) magnetic resonance imaging (MRI) using clinical 3 T MRI was explored with the goal of mapping asparagine (Asn), gamma-aminobutyric acid (GABA), glutamate (Glu), glycine (Gly), and myoinositol (MI), which exist in the brain. Phantoms with nine different conditions at concentrations of 10, 30, and 50 mM and pH values of 5.6, 6.2, and 7.4 were prepared for the five target molecules to evaluate the dependence of the CEST effect in the concentration, the pH, and the amplitude of the applied radiofrequency field B1. CEST images in the offset frequency range of ±6 parts per million (ppm) were acquired using a pulsed radio-frequency saturation scheme with a clinical 3 T MRI system. A voxel-based main magnetic field B0 inhomogeneity correction, where B0 is the center frequency offset at zero ppm, was performed by using the spline interpolation method to fit the full Z-spectrum to estimate the center frequency. A voxel-based CEST asymmetry map was calculated to evaluate amide (-NH), amine (-NH2), and hydroxyl (-OH) groups for the five target molecules. The CEST effect for Glu, GABA, and Gly clearly increased with increasing concentrations. The CEST effect for MI was minimal, with no noticeable differences at different concentrations. The CEST effect for Glu and Gly increased with increasing acidity. The highest CEST asymmetry for GABA was observed at pH 6.2. The CEST effect for Glu, GABA, and Gly increased with increasing B1 amplitude. For all target molecules, the CEST effect for the human 3 T MRI system increased with increasing concentration and B1 amplitude, but varied with pH, depending on the characteristics of the molecules. The CEST effect for MI may be not suitable with clinical MRI systems. These results show that CEST imaging in the brain with the amine protons by using 3 T MRI is possible for several neuronal diseases.

Planck intermediate results: XXXIII. Signature of the magnetic field geometry of interstellar filaments in dust polarization maps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ade, P. A. R.; Aghanim, N.; Alves, M. I. R.

2016-02-09

Planck observations at 353 GHz provide the first fully sampled maps of the polarized dust emission towards interstellar filaments and their backgrounds (i.e., the emission observed in the surroundings of the filaments). The data allow us to determine the intrinsic polarization properties of the filaments and therefore to provide insight into the structure of their magnetic field (B). In this paper, we present the polarization maps of three nearby (several parsecs long) star-forming filaments of moderate column density (N H about 10 22 cm -2): Musca, B211, and L1506. These three filaments are detected above the background in dust totalmore » and polarized emission. We use the spatial information to separate Stokes I, Q, and U of the filaments from those of their backgrounds, an essential step in measuring the intrinsic polarization fraction (p) and angle (ψ) of each emission component. We find that the polarization angles in the three filaments (ψ fil) are coherent along their lengths and not the same as in their backgrounds (ψ bg). The differences between ψ fil and ψ bg are 12° and 54° for Musca and L1506, respectively, and only 6° in the case of B211. These differences forMusca and L1506 are larger than the dispersions of ψ, both along the filaments and in their backgrounds. The observed changes of ψ are direct evidence of variations of the orientation of the plane of the sky (POS) projection of the magnetic field. As in previous studies, we find a decrease of several per cent in p with N H from the backgrounds to the crest of the filaments. We show that the bulk of the drop in p within the filaments cannot be explained by random fluctuations of the orientation of the magnetic field because they are too small (σ ψ< 10°). We recognize the degeneracy between the dust alignment efficiency (by, e.g., radiative torques) and the structure of the B-field in causing variations in p, but we argue that the decrease in p from the backgrounds to the filaments results in part from depolarization associated with the 3D structure of the B-field: both its orientation in the POS and with respect to the POS. We do not resolve the inner structure of the filaments, but at the smallest scales accessible with Planck (~0.2 pc), the observed changes of ψ and p hold information on the magnetic field structure within filaments. Finally, they show that both the mean field and its fluctuations in the filaments are different from those of their backgrounds, which points to a coupling between the matter and the B-field in the filament formation process.« less

Sub- and suprathreshold receptive field properties of pyramidal neurones in layers 5A and 5B of rat somatosensory barrel cortex

PubMed Central

Manns, Ian D; Sakmann, Bert; Brecht, Michael

2004-01-01

Layer 5 (L5) pyramidal neurones constitute a major sub- and intracortical output of the somatosensory cortex. This layer 5 is segregated into layers 5A and 5B which receive and distribute relatively independent afferent and efferent pathways. We performed in vivo whole-cell recordings from L5 neurones of the somatosensory (barrel) cortex of urethane-anaesthetized rats (aged 27–31 days). By delivering 6 deg single whisker deflections, whisker pad receptive fields were mapped for 16 L5A and 11 L5B neurones located below the layer 4 whisker-barrels. Average resting membrane potentials were −75.6±1.1 mV, and spontaneous action potential (AP) rates were 0.54± 0.14 APs s−1. Principal whisker (PW) evoked responses were similar in L5A and L5B neurones, with an average 5.0 ± 0.6 mV postsynaptic potential (PSP) and 0.12 ± 0.03 APs per stimulus. The layer 5A sub- and suprathreshold receptive fields (RFs) were more confined to the principle whisker than those of layer 5B. The basal dendritic arbors of layer 5A and 5B cells were located below both layer 4 barrels and septa, and the cell bodies were biased towards the barrel walls. Responses in both L5A and L5B developed slowly, with onset latencies of 10.1 ± 0.5 ms and peak latencies of 33.9 ± 3.3 ms. Contralateral multi-whisker stimulation evoked PSPs similar in amplitude to those of PW deflections; whereas, ipsilateral stimulation evoked smaller and longer latency PSPs. We conclude that in L5 a whisker deflection is represented in two ways: focally by L5A pyramids and more diffusely by L5B pyramids as a result of combining different inputs from lemniscal and paralemniscal pathways. The relevant output evoked by a whisker deflection could be the ensemble activity in the anatomically defined cortical modules associated with a single or a few barrel-columns. PMID:14724202

NOTE: The feasibility of an infrared system for real-time visualization and mapping of ultrasound fields

NASA Astrophysics Data System (ADS)

Shaw, Adam; Nunn, John

2010-06-01

In treatment planning for ultrasound therapy, it is desirable to know the 3D structure of the ultrasound field. However, mapping an ultrasound field in 3D is very slow, with even a single planar raster scan taking typically several hours. Additionally, hydrophones that are used for field mapping are expensive and can be damaged in some therapy fields. So there is value in rapid methods which enable visualization and mapping of the ultrasound field in about 1 min. In this note we explore the feasibility of mapping the intensity distribution by measuring the temperature distribution produced in a thin sheet of absorbing material. A 0.2 mm thick acetate sheet forms a window in the wall of a water tank containing the transducer. The window is oriented at 45° to the beam axis, and the distance from the transducer to the window can be varied. The temperature distribution is measured with an infrared camera; thermal images of the inclined plane could be viewed in real time or images could be captured for later analysis and 3D field reconstruction. We conclude that infrared thermography can be used to gain qualitative information about ultrasound fields. Thermal images are easily visualized with good spatial and thermal resolutions (0.044 mm and 0.05 °C in our system). The focus and field structure such as side lobes can be identified in real time from the direct video output. 3D maps and image planes at arbitrary orientations to the beam axis can be obtained and reconstructed within a few minutes. In this note we are primarily interested in the technique for characterization of high intensity focused ultrasound (HIFU) fields, but other applications such as physiotherapy fields are also possible.

The feasibility of an infrared system for real-time visualization and mapping of ultrasound fields.

PubMed

Shaw, Adam; Nunn, John

2010-06-07

In treatment planning for ultrasound therapy, it is desirable to know the 3D structure of the ultrasound field. However, mapping an ultrasound field in 3D is very slow, with even a single planar raster scan taking typically several hours. Additionally, hydrophones that are used for field mapping are expensive and can be damaged in some therapy fields. So there is value in rapid methods which enable visualization and mapping of the ultrasound field in about 1 min. In this note we explore the feasibility of mapping the intensity distribution by measuring the temperature distribution produced in a thin sheet of absorbing material. A 0.2 mm thick acetate sheet forms a window in the wall of a water tank containing the transducer. The window is oriented at 45 degrees to the beam axis, and the distance from the transducer to the window can be varied. The temperature distribution is measured with an infrared camera; thermal images of the inclined plane could be viewed in real time or images could be captured for later analysis and 3D field reconstruction. We conclude that infrared thermography can be used to gain qualitative information about ultrasound fields. Thermal images are easily visualized with good spatial and thermal resolutions (0.044 mm and 0.05 degrees C in our system). The focus and field structure such as side lobes can be identified in real time from the direct video output. 3D maps and image planes at arbitrary orientations to the beam axis can be obtained and reconstructed within a few minutes. In this note we are primarily interested in the technique for characterization of high intensity focused ultrasound (HIFU) fields, but other applications such as physiotherapy fields are also possible.

Signal-to-noise ratio and MR tissue parameters in human brain imaging at 3, 7, and 9.4 tesla using current receive coil arrays.

PubMed

Pohmann, Rolf; Speck, Oliver; Scheffler, Klaus

2016-02-01

Relaxation times, transmit homogeneity, signal-to-noise ratio (SNR) and parallel imaging g-factor were determined in the human brain at 3T, 7T, and 9.4T, using standard, tight-fitting coil arrays. The same human subjects were scanned at all three field strengths, using identical sequence parameters and similar 31- or 32-channel receive coil arrays. The SNR of three-dimensional (3D) gradient echo images was determined using a multiple replica approach and corrected with measured flip angle and T2 (*) distributions and the T1 of white matter to obtain the intrinsic SNR. The g-factor maps were derived from 3D gradient echo images with several GRAPPA accelerations. As expected, T1 values increased, T2 (*) decreased and the B1 -homogeneity deteriorated with increasing field. The SNR showed a distinctly supralinear increase with field strength by a factor of 3.10 ± 0.20 from 3T to 7T, and 1.76 ± 0.13 from 7T to 9.4T over the entire cerebrum. The g-factors did not show the expected decrease, indicating a dominating role of coil design. In standard experimental conditions, SNR increased supralinearly with field strength (SNR ∼ B0 (1.65) ). To take full advantage of this gain, the deteriorating B1 -homogeneity and the decreasing T2 (*) have to be overcome. © 2015 Wiley Periodicals, Inc.

SIR-B analysis of the Precambrian shield of Sudan and Egypt: Penetration studies and subsurface mapping

NASA Technical Reports Server (NTRS)

Dixon, T. H.; Roth, L.; Stern, R. J.; Almond, D. C.; Kroner, A.; Elshazly, E. M.

1984-01-01

A shuttle imaging radar-B (SIR-B) study is proposed for the Precambrian shield in southeast Egypt and northeast Sudan in an area east of the Nile. The phenomenon of radar penetration of thin, dry eolian/alluvial cover is to be confirmed and quantified. The penetration phenomenon is to be used to map structural and lithologic features. Field work to be done in conjunction with image acquisition is discussed.

Investigation of Regional Influence of Magic-Angle Effect on T2 in Human Articular Cartilage with Osteoarthritis at 3 T

PubMed Central

Wang, Ligong; Regatte, Ravinder R.

2014-01-01

Rationale and Objectives The objectives of this research study were to determine the magic-angle effect on different subregions of in vivo human femoral cartilage through the quantitative assessment of the effect of static magnetic field orientation (B0) on transverse (T2) relaxation time at 3.0 T. Materials and Methods Healthy volunteers (n = 5l; mean age, 36.4 years) and clinical patients (n = 5; mean age, 64 years) with early osteoarthritis (OA) were scanned at 3.0-T magnetic resonance using an 8-channel phased-array knee coil (transmit-receive). Results The T2 maps revealed significantly greater values in ventral than in dorsal regions. When the cartilage regions were oriented at 55° to B0 (magic angle), the longest T2 values were detected in comparison with the neighboring regions oriented 90° and 180° (0°) to B0. The subregions oriented 180° (0°) to B0 showed the lowest T2 values. Conclusions The differences in T2 values of different subregions suggest that magic-angle effect needs to be considered when interpreting cartilage abnormalities in OA patients. PMID:25481517

Identification and Characterization of an Arabidopsis thaliana Mutant lbt With High Tolerance to Boron Deficiency

PubMed Central

Huai, Zexun; Peng, Lishun; Wang, Sheliang; Zhao, Hua; Shi, Lei; Xu, Fangsen

2018-01-01

Boron (B) is an essential micronutrient of plants. In the present study, we characterized an Arabidopsis mutant lbt with significant low-boron tolerance that was identified based on our previous mapping of QTL for B efficiency in Arabidopsis. Multiple nutrient-deficiency analyses point out that lbt mutant is insensitive to only B-limitation stress. Compared with wild-type Col-0, the fresh weight, leaf area, root length and root elongation rate of lbt mutant were significantly improved under B deficiency during vegetative growth. lbt mutant also showed the improvements in plant height, branches and inflorescences compared with Col-0 during the reproductive stage under B limitation. Ultrastructure analysis of the leaves showed that starch accumulation in lbt mutant was significantly diminished compared with Col-0. Furthermore, there were no significant differences in the expression of transporter-related genes and B concentrations between Col-0 and lbt mutant under both normal B and low-B conditions. These results suggest that lbt mutant has a lower B demand than Col-0. Genetic analysis suggests that the low-B tolerant phenotype of lbt mutant is under the control of a monogenic recessive gene. Based on the high-density SNP linkage genetic map, only one QTL for low-B tolerance was mapped on chromosome 4 between 10.4 and 14.8 Mb. No any reported B-relative genes exist in the QTL interval, suggesting that a gene with unknown function controls the tolerance of lbt to B limitation. Taken together, lbt is a low-B tolerant mutant that does not depend on the uptake or transport of B and is controlled by a monogenic recessive gene mapped on chromosome 4, and cloning and functional analysis of LBT gene are expected to reveal novel mechanisms for plant resistance to B deficiency.

THE ALMA SPECTROSCOPIC SURVEY IN THE HUBBLE ULTRA DEEP FIELD: IMPLICATIONS FOR SPECTRAL LINE INTENSITY MAPPING AT MILLIMETER WAVELENGTHS AND CMB SPECTRAL DISTORTIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carilli, C. L.; Walter, F.; Chluba, J.

We present direct estimates of the mean sky brightness temperature in observing bands around 99 and 242 GHz due to line emission from distant galaxies. These values are calculated from the summed line emission observed in a blind, deep survey for spectral line emission from high redshift galaxies using ALMA (the ALMA spectral deep field observations “ASPECS” survey). In the 99 GHz band, the mean brightness will be dominated by rotational transitions of CO from intermediate and high redshift galaxies. In the 242 GHz band, the emission could be a combination of higher order CO lines, and possibly [C ii]more » 158 μ m line emission from very high redshift galaxies ( z  ∼ 6–7). The mean line surface brightness is a quantity that is relevant to measurements of spectral distortions of the cosmic microwave background, and as a potential tool for studying large-scale structures in the early universe using intensity mapping. While the cosmic volume and the number of detections are admittedly small, this pilot survey provides a direct measure of the mean line surface brightness, independent of conversion factors, excitation, or other galaxy formation model assumptions. The mean surface brightness in the 99 GHZ band is: T{sub B}  = 0.94 ± 0.09 μ K. In the 242 GHz band, the mean brightness is: T{sub B}  = 0.55 ± 0.033 μ K. These should be interpreted as lower limits on the average sky signal, since we only include lines detected individually in the blind survey, while in a low resolution intensity mapping experiment, there will also be the summed contribution from lower luminosity galaxies that cannot be detected individually in the current blind survey.« less

The Simple Map for a Single-null Divertor Tokamak: How to Find the Footprint of Field lines

NASA Astrophysics Data System (ADS)

Figgins, Montoya; Ali, Halima; Punjabi, Alkesh

2000-10-01

We are working with the Simple Map^1 to find the footprint of field lines on the diverter plate in a single-null tokamak. Footprint of a field line is the position of the line when it escapes across the divertor plate. The Simple Map represents the magnetic field in a single-null divertor tokamak. The path of a field line is given by the equations: X_n+1=X_n-kY_n(1-Y_n) and Y_n+1=Y_n+kX_n+1. In order to find the footprint, we must first find the last good surface which is Y=0.997135768 and X=0. The value of k is fixed at 0.6. The starting values X0 are fixed at X_0=0. We use 10,000 points between the last good surface and the X-point. The X-point is located at (0,1). We also use the Continuous Analog of the Simple Map given by the equations: X(φ)=X_0-kY0 (1-Y_0)φ and Y(φ)=Y_0+kX(φ)φ. This will tell us what the (φ,X) is which represents the field lines crossing the divertor plate. The divertor plate is located at Y=1. When graphed, the footprint of field lines looks like the rings of Saturn. This work is supported by US DOES OFES. Ms. Montoya Figgins is HU CFRT Summer Fusion High School Scholar from E. E. Smith High School in North Carolina. She is supported by NASA under its NASA SHARP Plus Program. 1. Punjabi A, Verma A, and Boozer A, Phys Rev Lett, 69, 3322 (1992) and J Plasma Phys, 52, 91 (1994)

High-Entropy Metal Diborides: A New Class of High-Entropy Materials and a New Type of Ultrahigh Temperature Ceramics

NASA Astrophysics Data System (ADS)

Gild, Joshua; Zhang, Yuanyao; Harrington, Tyler; Jiang, Sicong; Hu, Tao; Quinn, Matthew C.; Mellor, William M.; Zhou, Naixie; Vecchio, Kenneth; Luo, Jian

2016-11-01

Seven equimolar, five-component, metal diborides were fabricated via high-energy ball milling and spark plasma sintering. Six of them, including (Hf0.2Zr0.2Ta0.2Nb0.2Ti0.2)B2, (Hf0.2Zr0.2Ta0.2Mo0.2Ti0.2)B2, (Hf0.2Zr0.2Mo0.2Nb0.2Ti0.2)B2, (Hf0.2Mo0.2Ta0.2Nb0.2Ti0.2)B2, (Mo0.2Zr0.2Ta0.2Nb0.2Ti0.2)B2, and (Hf0.2Zr0.2Ta0.2Cr0.2Ti0.2)B2, possess virtually one solid-solution boride phase of the hexagonal AlB2 structure. Revised Hume-Rothery size-difference factors are used to rationalize the formation of high-entropy solid solutions in these metal diborides. Greater than 92% of the theoretical densities have been generally achieved with largely uniform compositions from nanoscale to microscale. Aberration-corrected scanning transmission electron microscopy (AC STEM), with high-angle annular dark-field and annular bright-field (HAADF and ABF) imaging and nanoscale compositional mapping, has been conducted to confirm the formation of 2-D high-entropy metal layers, separated by rigid 2-D boron nets, without any detectable layered segregation along the c-axis. These materials represent a new type of ultra-high temperature ceramics (UHTCs) as well as a new class of high-entropy materials, which not only exemplify the first high-entropy non-oxide ceramics (borides) fabricated but also possess a unique non-cubic (hexagonal) and layered (quasi-2D) high-entropy crystal structure that markedly differs from all those reported in prior studies. Initial property assessments show that both the hardness and the oxidation resistance of these high-entropy metal diborides are generally higher/better than the average performances of five individual metal diborides made by identical fabrication processing.

FPGA-based LDPC-coded APSK for optical communication systems.

PubMed

Zou, Ding; Lin, Changyu; Djordjevic, Ivan B

2017-02-20

In this paper, with the aid of mutual information and generalized mutual information (GMI) capacity analyses, it is shown that the geometrically shaped APSK that mimics an optimal Gaussian distribution with equiprobable signaling together with the corresponding gray-mapping rules can approach the Shannon limit closer than conventional quadrature amplitude modulation (QAM) at certain range of FEC overhead for both 16-APSK and 64-APSK. The field programmable gate array (FPGA) based LDPC-coded APSK emulation is conducted on block interleaver-based and bit interleaver-based systems; the results verify a significant improvement in hardware efficient bit interleaver-based systems. In bit interleaver-based emulation, the LDPC-coded 64-APSK outperforms 64-QAM, in terms of symbol signal-to-noise ratio (SNR), by 0.1 dB, 0.2 dB, and 0.3 dB at spectral efficiencies of 4.8, 4.5, and 4.2 b/s/Hz, respectively. It is found by emulation that LDPC-coded 64-APSK for spectral efficiencies of 4.8, 4.5, and 4.2 b/s/Hz is 1.6 dB, 1.7 dB, and 2.2 dB away from the GMI capacity.

Rapid Parametric Mapping of the Longitudinal Relaxation Time T1 Using Two-Dimensional Variable Flip Angle Magnetic Resonance Imaging at 1.5 Tesla, 3 Tesla, and 7 Tesla

PubMed Central

Dieringer, Matthias A.; Deimling, Michael; Santoro, Davide; Wuerfel, Jens; Madai, Vince I.; Sobesky, Jan; von Knobelsdorff-Brenkenhoff, Florian; Schulz-Menger, Jeanette; Niendorf, Thoralf

2014-01-01

Introduction Visual but subjective reading of longitudinal relaxation time (T1) weighted magnetic resonance images is commonly used for the detection of brain pathologies. For this non-quantitative measure, diagnostic quality depends on hardware configuration, imaging parameters, radio frequency transmission field (B1+) uniformity, as well as observer experience. Parametric quantification of the tissue T1 relaxation parameter offsets the propensity for these effects, but is typically time consuming. For this reason, this study examines the feasibility of rapid 2D T1 quantification using a variable flip angles (VFA) approach at magnetic field strengths of 1.5 Tesla, 3 Tesla, and 7 Tesla. These efforts include validation in phantom experiments and application for brain T1 mapping. Methods T1 quantification included simulations of the Bloch equations to correct for slice profile imperfections, and a correction for B1+. Fast gradient echo acquisitions were conducted using three adjusted flip angles for the proposed T1 quantification approach that was benchmarked against slice profile uncorrected 2D VFA and an inversion-recovery spin-echo based reference method. Brain T1 mapping was performed in six healthy subjects, one multiple sclerosis patient, and one stroke patient. Results Phantom experiments showed a mean T1 estimation error of (-63±1.5)% for slice profile uncorrected 2D VFA and (0.2±1.4)% for the proposed approach compared to the reference method. Scan time for single slice T1 mapping including B1+ mapping could be reduced to 5 seconds using an in-plane resolution of (2×2) mm2, which equals a scan time reduction of more than 99% compared to the reference method. Conclusion Our results demonstrate that rapid 2D T1 quantification using a variable flip angle approach is feasible at 1.5T/3T/7T. It represents a valuable alternative for rapid T1 mapping due to the gain in speed versus conventional approaches. This progress may serve to enhance the capabilities of parametric MR based lesion detection and brain tissue characterization. PMID:24621588

Rapid parametric mapping of the longitudinal relaxation time T1 using two-dimensional variable flip angle magnetic resonance imaging at 1.5 Tesla, 3 Tesla, and 7 Tesla.

PubMed

Dieringer, Matthias A; Deimling, Michael; Santoro, Davide; Wuerfel, Jens; Madai, Vince I; Sobesky, Jan; von Knobelsdorff-Brenkenhoff, Florian; Schulz-Menger, Jeanette; Niendorf, Thoralf

2014-01-01

Visual but subjective reading of longitudinal relaxation time (T1) weighted magnetic resonance images is commonly used for the detection of brain pathologies. For this non-quantitative measure, diagnostic quality depends on hardware configuration, imaging parameters, radio frequency transmission field (B1+) uniformity, as well as observer experience. Parametric quantification of the tissue T1 relaxation parameter offsets the propensity for these effects, but is typically time consuming. For this reason, this study examines the feasibility of rapid 2D T1 quantification using a variable flip angles (VFA) approach at magnetic field strengths of 1.5 Tesla, 3 Tesla, and 7 Tesla. These efforts include validation in phantom experiments and application for brain T1 mapping. T1 quantification included simulations of the Bloch equations to correct for slice profile imperfections, and a correction for B1+. Fast gradient echo acquisitions were conducted using three adjusted flip angles for the proposed T1 quantification approach that was benchmarked against slice profile uncorrected 2D VFA and an inversion-recovery spin-echo based reference method. Brain T1 mapping was performed in six healthy subjects, one multiple sclerosis patient, and one stroke patient. Phantom experiments showed a mean T1 estimation error of (-63±1.5)% for slice profile uncorrected 2D VFA and (0.2±1.4)% for the proposed approach compared to the reference method. Scan time for single slice T1 mapping including B1+ mapping could be reduced to 5 seconds using an in-plane resolution of (2×2) mm2, which equals a scan time reduction of more than 99% compared to the reference method. Our results demonstrate that rapid 2D T1 quantification using a variable flip angle approach is feasible at 1.5T/3T/7T. It represents a valuable alternative for rapid T1 mapping due to the gain in speed versus conventional approaches. This progress may serve to enhance the capabilities of parametric MR based lesion detection and brain tissue characterization.

Mars synthetic topographic mapping

USGS Publications Warehouse

Wu, S.S.C.

1978-01-01

Topographic contour maps of Mars are compiled by the synthesis of data acquired from various scientific experiments of the Mariner 9 mission, including S-band radio-occulation, the ultraviolet spectrometer (UVS), the infrared radiometer (IRR), the infrared interferometer spectrometer (IRIS) and television imagery, as well as Earth-based radar information collected at Goldstone, Haystack, and Arecibo Observatories. The entire planet is mapped at scales of 1:25,000,000 and 1:25,000,000 using Mercator, Lambert, and polar stereographic map projections. For the computation of map projections, a biaxial spheroid figure is adopted. The semimajor and semiminor axes are 3393.4 and 3375.7 km, respectively, with a polar flattening of 0.0052. For the computation of elevations, a topographic datum is defined by a gravity field described in terms of spherical harmonics of fourth order and fourth degree combined with a 6.1-mbar occulation pressure surface. This areoid can be approximated by a triaxial ellipsoid with semimajor axes of A = 3394.6 km and B = 3393.3 km and a semiminor axis of C = 3376.3 km. The semimajor axis A intersects the Martian surface at longitude 105??W. The dynamic flattening of Mars is 0.00525. The contour intercal of the maps is 1 km. For some prominent features where overlapping pictures from Mariner 9 are available, local contour maps at relatively larger scales were also compiled by photogrammetric methods on stereo plotters. ?? 1978.

Verapamil protective effect on natural and artificial magnetic field cardiovascular impact.

PubMed

Gmitrov, Juraj; Ohkubo, Chiyoji

2002-10-01

Previously we found an opposite effect of artificial static magnetic field (SMF) and natural geomagnetic field (GMF) on arterial baroreceptors. A 0.35 T SMF increased baroreflex sensitivity (BRS), whereas GMF disturbance decreased BRS. Here, we investigated interrelated impacts on arterial baroreceptors of 0.35 T SMF, generated by Nd(2)-Fe(14)-B alloy magnets, GMF, and verapamil, a Ca(2+) channel blocking agent. We measured BRS in rabbits before and after local SMF exposure of sinocarotid baroreceptors or after simultaneous SMF and verapamil application, in conjunction with geomagnetic disturbance during actual experimental run (determined by K-index) and geomagnetic disturbance over the preceding 24 h of each experiment (A(k)-index). BRS was estimated from peak responses of mean arterial pressure (MAP) and heart rate, expressed as percentages of the resting values preceding each pair of pressure (phenylephrine) and depressor drug (nitroprusside) injections. Prior to verapamil and/or SMF application we found a significant positive correlation of K-index with MAP (t = 2.39, P =.021, n = 44), but negative with BRS (t = -4.60, P =.0003, n = 44), and found a negative correlation of A(k)-index with BRS (t = -2.7, P = 0.01, n = 44). SMF induced an increase in BRS (0.79 +/- 0.1 vs. 1.15 +/- 0.1 bpm%/mmHg%, initial value vs. SMF exposure, P <.0002, n = 26). Verapamil infusion blocked the SMF and GMF effect on BRS, indicating Ca(2+) channels as a possible site of both fields' impact. SMF and GMF probably affect baroreceptor sensory transduction, modulating baroreceptor membranes' Ca(2+) channel permeability. Copyright 2002 Wiley-Liss, Inc.

Effect of increased IIDR in the nucleus freedom cochlear implant system.

PubMed

Holden, Laura K; Skinner, Margaret W; Fourakis, Marios S; Holden, Timothy A

2007-10-01

The objective of this study was to evaluate the effect of the increased instantaneous input dynamic range (IIDR) in the Nucleus Freedom cochlear implant (CI) system on recipients' ability to perceive soft speech and speech in noise. Ten adult Freedom CI recipients participated. Two maps differing in IIDR were placed on each subject's processor at initial activation. The IIDR was set to 30 dB for one map and 40 dB for the other. Subjects used both maps for at least one month prior to speech perception testing. Results revealed significantly higher scores for words (50 dB SPL), for sentences in background babble (65 dB SPL), and significantly lower sound field threshold levels with the 40 compared to the 30 dB IIDR map. Ceiling effects may have contributed to non-significant findings for sentences in quiet (50 dB SPL). The Freedom's increased IIDR allows better perception of soft speech and speech in noise.

Extinction in the Star Cluster SAI 113 and Galactic Structure in Carina

NASA Astrophysics Data System (ADS)

Carraro, Giovanni; Turner, David G.; Majaess, Daniel J.; Baume, Gustavo L.; Gamen, Roberto; Molina Lera, José A.

2017-04-01

Photometric CCD UB VI C photometry obtained for 4860 stars surrounding the embedded southern cluster SAI 113 (Skiff 8) is used to examine the reddening in the field and derive the distance to the cluster and nearby van Genderen 1. Spectroscopic color excesses for bright cluster stars, photometric reddenings for A3 dwarfs, and dereddening of cluster stars imply that the reddening and extinction laws match results derived for other young clusters in Carina: {E}U-B/{E}B-V≃ 0.64 and {R}V≃ 4. SAI 113 displays features that may be linked to a history of dynamical interactions among member stars: possible circumstellar reddening and rapid rotation of late B-type members, ringlike features in star density, and a compact core, with most stars distributed randomly across the field. The group van Genderen 1 resembles a stellar asterism, with potential members distributed randomly across the field. Distances of 3.90 ± 0.19 kpc and 2.49 ± 0.09 kpc are derived for SAI 113 and van Genderen 1, respectively, with variable reddenings {E}B-V ranging from 0.84 to 1.29 and 0.23 to 1.28. The SRC variables CK Car and EV Car may be outlying members of van Genderen 1, thereby of use for calibrating the period-luminosity relation for pulsating M supergiants. More importantly, the anomalous reddening and extinction evident in Carina and nearby regions of the Galactic plane in the fourth quadrant impact the mapping of spiral structure from young open clusters. The distribution of spiral arms in the fourth quadrant may be significantly different from how it is often portrayed.

Magnetic fields in multiple bright-rimmed clouds in different directions of H II region IC 1396

NASA Astrophysics Data System (ADS)

Soam, Archana; Maheswar, G.; Lee, Chang Won; Neha, S.; Kim, Kee-Tae

2018-06-01

Bright-rimmed clouds (BRCs) form on the edges of H II regions affected by high-energy radiation from a central ionizing source. The UV radiation from the ionizing source results in compression and ionization, causing either cloud disruption or further star formation. In this work, we present R-band polarization measurements towards four BRCs, namely IC 1396A, BRC 37, BRC 38 and BRC 39, located in different directions in the H II region, Sh2-131, in order to map the magnetic field (B-field) in the plane of the sky. These BRCs are illuminated by the O star HD 206267 and present a range of projected on-sky geometries. This provides an opportunity to gain an understanding of the magnetized evolution of BRCs. The B-field geometries of the clouds deduced from the polarization data, after correction for foreground contamination by the interstellar medium, are seen to be connected to the ambient B-fields on large scales. They seem to play an important role in shaping the clouds IC 1396A and BRC 37. BRCs 38 and 39 show a broader and snubber head morphology, possibly because the B-fields are aligned with incoming radiation, as revealed in the simulations. A good general agreement is noted on comparing our observational results with the simulations, supporting the importance of B-fields in BRC evolution. This work is the first step towards systematic mapping the B-fields morphology in multiple BRCs in an expanding H II region, extending our previous work.

Efficacy of the Amsler Grid Test in Evaluating Glaucomatous Central Visual Field Defects.

PubMed

Su, Daniel; Greenberg, Andrew; Simonson, Joseph L; Teng, Christopher C; Liebmann, Jeffrey M; Ritch, Robert; Park, Sung Chul

2016-04-01

To investigate the efficacy of the Amsler grid test in detecting central visual field (VF) defects in glaucoma. Prospective, cross-sectional study. Patients with glaucoma with reliable Humphrey 10-2 Swedish Interactive Threshold Algorithm standard VF on the date of enrollment or within the previous 3 months. Amsler grid tests were performed for each eye and were considered "abnormal" if there was any perceived scotoma with missing or blurry grid lines within the central 10 degrees ("Amsler grid scotoma"). An abnormal 10-2 VF was defined as ≥3 adjacent points at P < 0.01 with at least 1 point at P < 0.005 in the same hemifield on the pattern deviation plot. Sensitivity, specificity, and positive and negative predictive values of the Amsler grid scotoma area were calculated with the 10-2 VF as the clinical reference standard. Among eyes with an abnormal 10-2 VF, regression analyses were performed between the Amsler grid scotoma area and the 10-2 VF parameters (mean deviation [MD], scotoma extent [number of test points with P < 0.01 in total deviation map] and scotoma mean depth [mean sensitivity of test points with P < 0.01 in total deviation map]). Sensitivity, specificity, and positive and negative predictive values of the Amsler grid scotoma area. A total of 106 eyes (53 patients) were included (mean ± standard deviation age, 24-2 MD and 10-2 MD = 66±12 years, -9.61±8.64 decibels [dB] and -9.75±9.00 dB, respectively). Sensitivity, specificity, and positive and negative predictive values of the Amsler grid test were 68%, 92%, 97%, and 46%, respectively. Sensitivity was 40% in eyes with 10-2 MD better than -6 dB, 58% in eyes with 10-2 MD between -12 and -6 dB, and 92% in eyes with 10-2 MD worse than -12 dB. The area under the receiver operating characteristic curve of the Amsler grid scotoma area was 0.810 (95% confidence interval, 0.723-0.880, P < 0.001). The Amsler grid scotoma area had the strongest relationship with 10-2 MD (quadratic R(2)=0.681), followed by 10-2 scotoma extent (quadratic R(2)=0.611) and 10-2 scotoma mean depth (quadratic R(2)=0.299) (all P < 0.001). The Amsler grid can be used to screen for moderate to severe central vision loss from glaucoma. Copyright © 2016 American Academy of Ophthalmology. Published by Elsevier Inc. All rights reserved.

FLASH proton density imaging for improved surface coil intensity correction in quantitative and semi-quantitative SSFP perfusion cardiovascular magnetic resonance.

PubMed

Nielles-Vallespin, Sonia; Kellman, Peter; Hsu, Li-Yueh; Arai, Andrew E

2015-02-17

A low excitation flip angle (α < 10°) steady-state free precession (SSFP) proton-density (PD) reference scan is often used to estimate the B1-field inhomogeneity for surface coil intensity correction (SCIC) of the saturation-recovery (SR) prepared high flip angle (α = 40-50°) SSFP myocardial perfusion images. The different SSFP off-resonance response for these two flip angles might lead to suboptimal SCIC when there is a spatial variation in the background B0-field. The low flip angle SSFP-PD frames are more prone to parallel imaging banding artifacts in the presence of off-resonance. The use of FLASH-PD frames would eliminate both the banding artifacts and the uneven frequency response in the presence of off-resonance in the surface coil inhomogeneity estimate and improve homogeneity of semi-quantitative and quantitative perfusion measurements. B0-field maps, SSFP and FLASH-PD frames were acquired in 10 healthy volunteers to analyze the SSFP off-resonance response. Furthermore, perfusion scans preceded by both FLASH and SSFP-PD frames from 10 patients with no myocardial infarction were analyzed semi-quantitatively and quantitatively (rest n = 10 and stress n = 1). Intra-subject myocardial blood flow (MBF) coefficient of variation (CoV) over the whole left ventricle (LV), as well as intra-subject peak contrast (CE) and upslope (SLP) standard deviation (SD) over 6 LV sectors were investigated. In the 6 out of 10 cases where artifacts were apparent in the LV ROI of the SSFP-PD images, all three variability metrics were statistically significantly lower when using the FLASH-PD frames as input for the SCIC (CoVMBF-FLASH = 0.3 ± 0.1, CoVMBF-SSFP = 0.4 ± 0.1, p = 0.03; SDCE-FLASH = 10 ± 2, SDCE-SSFP = 32 ± 7, p = 0.01; SDSLP-FLASH = 0.02 ± 0.01, SDSLP-SSFP = 0.06 ± 0.02, p = 0.03). Example rest and stress data sets from the patient pool demonstrate that the low flip angle SSFP protocol can exhibit severe ghosting artifacts originating from off-resonance banding artifacts at the edges of the field of view that parallel imaging is not able to unfold. These artifacts lead to errors in the quantitative perfusion maps and the semi-quantitative perfusion indexes, such as false positives. It is shown that this can be avoided by using FLASH-PD frames as input for the SCIC. FLASH-PD images are recommended as input for SCIC of SSFP perfusion images instead of low flip angle SSFP-PD images.

The MUSE Hubble Ultra Deep Field Survey. V. Spatially resolved stellar kinematics of galaxies at redshift 0.2 ≲ z ≲ 0.8

NASA Astrophysics Data System (ADS)

Guérou, Adrien; Krajnović, Davor; Epinat, Benoit; Contini, Thierry; Emsellem, Eric; Bouché, Nicolas; Bacon, Roland; Michel-Dansac, Leo; Richard, Johan; Weilbacher, Peter M.; Schaye, Joop; Marino, Raffaella Anna; den Brok, Mark; Erroz-Ferrer, Santiago

2017-11-01

We present spatially resolved stellar kinematic maps, for the first time, for a sample of 17 intermediate redshift galaxies (0.2 ≲ z ≲ 0.8). We used deep MUSE/VLT integral field spectroscopic observations in the Hubble Deep Field South (HDFS) and Hubble Ultra Deep Field (HUDF), resulting from ≈30 h integration time per field, each covering 1' × 1' field of view, with ≈ 0.̋65 spatial resolution. We selected all galaxies brighter than 25 mag in the I band and for which the stellar continuum is detected over an area that is at least two times larger than the spatial resolution. The resulting sample contains mostly late-type disk, main-sequence star-forming galaxies with 108.5 M⊙ ≲ M∗ ≲ 1010.5 M⊙. Using a full-spectrum fitting technique, we derive two-dimensional maps of the stellar and gas kinematics, including the radial velocity V and velocity dispersion σ. We find that most galaxies in the sample are consistent with having rotating stellar disks with roughly constant velocity dispersions and that the second order velocity moments Vrms = √V2+σ2 of the gas and stars, a scaling proxy for the galaxy gravitational potential, compare well to each other. These spatially resolved observations of the stellar kinematics of intermediate redshift galaxies suggest that the regular stellar kinematics of disk galaxies that is observed in the local Universe was already in place 4-7 Gyr ago and that their gas kinematics traces the gravitational potential of the galaxy, thus is not dominated by shocks and turbulent motions. Finally, we build dynamical axisymmetric Jeans models constrained by the derived stellar kinematics for two specific galaxies and derive their dynamical masses. These are in good agreement (within 25%) with those derived from simple exponential disk models based on the gas kinematics. The obtained mass-to-light ratios hint towards dark matter dominated systems within a few effective radii. Based on observations made with ESO telescopes at the La Silla-Paranal Observatory under programmes 094.A-0289(B), 095.A-0010(A), 096.A-0045(A) and 096.A-0045(B).

Geostatistical analysis of the power-law exponents of the size distribution of earthquakes, Quaternary faults and monogenetic volcanoes in the Central Trans-Mexican Volcanic Belt

NASA Astrophysics Data System (ADS)

Mendoza-Ponce, A.; Perez Lopez, R.; Guardiola-Albert, C.; Garduño-Monroy, V. H.; Figueroa-Soto, Á.

2017-12-01

The Trans Mexican Volcanic Belt (TMVB) is related to the convergence between the Cocos and Rivera plates beneath the North American plate by the Middle America Trench (MAT). Moreover, there is also intraplate faulting within the TMVB, which is responsible of important earthquakes like the Acambay in 1912 (Mw 7.0) and Maravatío in 1979 (Mb 5.3). In this tectonic scheme, monogenetic volcanoes, active faulting and earthquakes configure a complex tectonic frame where different spatial anisotropy featured this activity. This complexity can be characterized by the power-law of the frequency-size distribution of the monogenetic volcanoes, the faults and the earthquakes. This power-law is determined by the b-value of the Gutenberg-Richter law in case of the earthquakes. The novelty of this work is the application of geostatistics techniques (variograms) for the analysis of spatial distribution of the b-values obtained from the size distribution of the basal diameter for monogenetic volcanoes in the Michoacán-Guanajuato Volcanic Field (bmv), surface area for faults in the Morelia-Acambay fault system (bf) and the seismicity in the Central TMVB (beq). Therefore, the anisotropy in each case was compared and a geometric tectonic model was proposed. The evaluation of the spatial distribution of the b-value maps gives us a general interpretation of the tectonic stress field and the seismic hazard in the zone. Hence, the beq-value map for the seismic catalog shows anomalously low and high values, reveling two different processes, one related to a typical tectonic rupture (low b-values) and the other one related to hydraulic fracturing (high b-values). The resulting bmv-map for the diameter basal cones indicates us the locations of the ages of the monogenetic volcanoes, giving important information about the volcanic hazard. High bmv-values are correlated with the presence of young cinder cones and an increasing probability of a new volcano. For the Morelia-Acambay fault system, the bf-map shows the strongest locations along the system where tectonic stress accumulates.

Non-polynomial closed string field theory: loops and conformal maps

NASA Astrophysics Data System (ADS)

Hua, Long; Kaku, Michio

1990-11-01

Recently, we proposed the complete classical action for the non-polynomial closed string field theory, which succesfully reproduced all closed string tree amplitudes. (The action was simultaneously proposed by the Kyoto group). In this paper, we analyze the structure of the theory. We (a) compute the explicit conformal map for all g-loop, p-puncture diagrams, (b) compute all one-loop, two-puncture maps in terms of hyper-elliptic functions, and (c) analyze their modular structure. We analyze, but do not resolve, the question of modular invariance.

Probe measurements of the three-dimensional magnetic field structure in a rotating magnetic field sustained field-reversed configuration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Velas, K. M.; Milroy, R. D.

A translatable three-axis probe was constructed and installed on the translation, confinement, and sustainment upgrade (TCSU) experiment. With ninety windings, the probe can simultaneously measure B{sub r}, B{sub θ}, and B{sub z} at 30 radial positions, and can be placed at any desired axial position within the field reversed configuration (FRC) confinement chamber. Positioning the probe at multiple axial positions and taking multiple repeatable shots allows for a full r-z map of the magnetic field. Measurements were made for odd-parity rotating magnetic field (RMF) antennas and even-parity RMF. The steady state data from applying a 10 kHz low pass filter usedmore » in conjunction with data at the RMF frequency yields a map of the full 3D rotating field structure. Comparisons will be made to the 3D magnetic structure predicted by NIMROD simulations, with parameters adjusted to match that of the TCSU experiments. The probe provides sufficient data to utilize a Maxwell stress tensor approach to directly measure the torque applied to the FRC's electrons, which combined with a resistive torque model, yields an estimate of the average FRC resistivity.« less

Design and Evaluation of a Balloon-Borne Electric Field Sensor

DTIC Science & Technology

1976-10-18

on a Lume A? A.3 Total Induced Charge vs, Orientation AB APPENDIX B ELEMflUICS PACAE B.l Electrometer Amplifier BI B.Z2 Charge Aplifier Bl B.3...properties change with height? 3) How strongly are fields mapped between the ground and the ionosphere? Because of its ability to make accurate profile...then each conductor should reach the potential of the average atmospheric potential surrounding the probes. These probes probably are of limited use

Feeding and feedback in radio galaxies of the local universe

NASA Astrophysics Data System (ADS)

Couto, Guilherme dos Santos

2016-10-01

We present integral field spectroscopic data covering the inner kiloparsecs of four radio galaxies of the local Universe (z<0.07), Arp 102B, Pictor A, 3C 33 and 4C +29.30, obtained with the GMOS-IFU instrument of the Gemini telescopes. We use these data to analyze the gas excitation and kinematics via two-dimensional maps. Using the flux distributions of the emission lines, we identify extended emission in ionized gas up to the edges of the observed field, which corresponds to 1.7 kpc x 2.5 kpc for Arp 102B, 2.5 kpc x 3.4 kpc for Pictor A, 4.0 kpc x 5.8 kpc for 3C 33 and 4.3 kpc x 6.2 kpc for 4C +29.30. The extended line emitting gas displays structures resembling rotating disks, spiral arms and bars. Line ratios indicate that both photons from the nuclear source and shocks originated in the interaction of the radio jet with circumnuclear gas are ionizing mechanisms of the gas. Line ratio values are typical of Seyfert galaxies for 3C 33 and 4C +29.30, while intermediate values between Seyferts and LINERs are observed in Arp 102B. Pictor A galaxy, however, shows low values of [NII]/Ha=0.15-0.25, expected for HII regions. We suggest that these values are observed due to the low gas metallicity (12+log(O/H)=8.39). Centroid velocity maps show that the gas kinematics is dominated by rotation only in Arp 102B and 3C 33. Outflows are observed in the galaxies Arp 102B, 3C 33 and 4C +29.30. We obtain mass outflow rates of 0.32-0.49 Msun per year, but the outflow kinetic power is small, ranging 0.04-0.07% of the AGN bolometric luminosity, indicating that the feedback has little impact in the host galaxies evolution. The high masses of ionized gas, ranging from 7.4E7 to 4.6E8 Msun, and the fact that these galaxies are early-type, suggest an external origin of the gas. Indeed, it is observed evidence of interaction with companion galaxies in Arp 102B, Pictor A and 4C +29.30. We suggest that the capture of mass has triggered the nuclear activity in these galaxies, with the high masses feeding not only the SMBH but also being a possible source of star formation.

Mapping Surface Soil Organic Carbon for Crop Fields with Remote Sensing

NASA Technical Reports Server (NTRS)

Chen, Feng; Kissel, David E.; West, Larry T.; Rickman, Doug; Luvall, J. C.; Adkins, Wayne

2004-01-01

The organic C concentration of surface soil can be used in agricultural fields to vary crop production inputs. Organic C is often highly spatially variable, so that maps of soil organic C can be used to vary crop production inputs using precision farming technology. The objective of this research was to demonstrate the feasibility of mapping soil organic C on three fields, using remotely sensed images of the fields with a bare surface. Enough soil samples covering the range in soil organic C must be taken from each field to develop a satisfactory relationship between soil organic C content and image reflectance values. The number of soil samples analyzed in the three fields varied from 22 to 26. The regression equations differed between fields, but gave highly significant relationships with R2 values of 0.93, 0.95, and 0.89 for the three fields. A comparison of predicted and measured values of soil organic C for an independent set of 2 soil samples taken on one of the fields gave highly satisfactory results, with a comparison equation of % organic C measured + 1.02% organic C predicted, with r2 = 0.87.

Multifunctional Polymer Microbubbles for Advanced Sentinel Lymph Node Imaging and Mapping

DTIC Science & Technology

2012-06-01

of thiolated poly(acrylic acid) with fluorescein attached. (b) Bright field image of large bubbles stabilized by polymer and phospholipid...Page 1 of 6 AD_________________ Award Number: W81XWH-11-1-0215 TITLE:   Multifunctional Polymer Microbubbles for Advanced... Polymer Microbubbles for Advanced Sentinel Lymph Node Imaging and Mapping 5b. GRANT NUMBER W81XWH-11-1-0215   5c. PROGRAM ELEMENT NUMBER 6

Indonesian Geomagnetic Maps for Epoch 2015.0 to cover of Indonesian Regions

NASA Astrophysics Data System (ADS)

Syirojudin, M.; Murjaya, J.; Zubaidah, S.; Hasanudin; Ahadi, S.; Efendi, N.; Suroyo, T.

2018-03-01

In compliance with the resolutions of IAGA (International Association of Geomagnetism and Aeronomy), Since 1960’s, every five years BMKG or Meteorology, Climatology and Geophysics Agency of Indonesia made geomagnetic field maps based on actual measurements in 53 repeat stations. It’s the map for more accurate result of Geomagnetic maps Epoch 2015.0, the number of repeat stations has been increased to 68 locations. Analysis data was conducted by spatial analyses using collocated co-kriging and kriging with external drift to map the observation data in five components, such as Declination (D), Inclination (I), Vertical (Z), Horizontal (H), and Total Geomagnetic Field (F). The data reduction used one permanent observatory i.e., Kupang Geophysical Observatory, as a reference standard. The results of this Geomagnetic Maps, that the contour lines of Indonesian geomagnetic declination in range -1 to 4.5 degree, Inclination component are -5 to -37 degree, Vertical component are -4000 to -28000 nT, Horizontal component are 36000 to 42000 nT, and Total Geomagnetic Field are 39000 to 46000 nT. In conclusion, Indonesian Geomagnetic Maps for Epoch 2015.0 can be used to compute geomagnetic data around Indonesian regions until next 5 years.

Use of airborne hyperspectral imagery to map soil parameters in tilled agricultural fields

USGS Publications Warehouse

Hively, W. Dean; McCarty, Gregory W.; Reeves, James B.; Lang, Megan W.; Oesterling, Robert A.; Delwiche, Stephen R.

2011-01-01

Soil hyperspectral reflectance imagery was obtained for six tilled (soil) agricultural fields using an airborne imaging spectrometer (400–2450 nm, ~10 nm resolution, 2.5 m spatial resolution). Surface soil samples (n = 315) were analyzed for carbon content, particle size distribution, and 15 agronomically important elements (Mehlich-III extraction). When partial least squares (PLS) regression of imagery-derived reflectance spectra was used to predict analyte concentrations, 13 of the 19 analytes were predicted with R2 > 0.50, including carbon (0.65), aluminum (0.76), iron (0.75), and silt content (0.79). Comparison of 15 spectral math preprocessing treatments showed that a simple first derivative worked well for nearly all analytes. The resulting PLS factors were exported as a vector of coefficients and used to calculate predicted maps of soil properties for each field. Image smoothing with a 3 × 3 low-pass filter prior to spectral data extraction improved prediction accuracy. The resulting raster maps showed variation associated with topographic factors, indicating the effect of soil redistribution and moisture regime on in-field spatial variability. High-resolution maps of soil analyte concentrations can be used to improve precision environmental management of farmlands.

Antibody Responses to MAP 1B and Other Cowdria ruminantium Antigens Are Down Regulated in Cattle Challenged with Tick-Transmitted Heartwater

PubMed Central

Semu, S. M.; Peter, T. F.; Mukwedeya, D.; Barbet, A. F.; Jongejan, F.; Mahan, S. M.

2001-01-01

Serological diagnosis of heartwater or Cowdria ruminantium infection has been hampered by severe cross-reactions with antibody responses to related ehrlichial agents. A MAP 1B indirect enzyme-linked immunosorbent assay that has an improved specificity and sensitivity for detection of immunoglobulin G (IgG) antibodies has been developed to overcome this constraint (A. H. M. van Vliet, B. A. M. Van der Zeijst, E. Camus, S. M. Mahan, D. Martinez, and F. Jongejan, J. Clin. Microbiol. 33:2405–2410, 1995). When sera were tested from cattle in areas of endemic heartwater infection in Zimbabwe, only 33% of the samples tested positive in this assay despite a high infection pressure (S. M. Mahan, S. M. Samu, T. F. Peter, and F. Jongejan, Ann. N.Y. Acad. Sci 849:85–87, 1998). To determine underlying causes for this observation, the kinetics of MAP 1B-specific IgG antibodies in cattle after tick-transmitted C. ruminantium infection and following recovery were investigated. Sera collected weekly over a period of 52 weeks from 37 cattle, which were naturally or experimentally infected with C. ruminantium via Amblyomma hebraeum ticks, were analyzed. MAP 1B-specific IgG antibody responses developed with similar kinetics in both field- and laboratory-infected cattle. IgG levels peaked at 4 to 9 weeks after tick infestation and declined to baseline levels between 14 and 33 weeks, despite repeated exposure to infected ticks and the establishment of a carrier state as demonstrated by PCR and xenodiagnosis. Some of the serum samples from laboratory, and field-infected cattle were also analyzed by immunoblotting and an indirect fluorescent-antibody test (IFAT) to determine whether this observed seroreversion was specific to the MAP 1B antigen. Reciprocal IFAT and immunoblot MAP 1-specific antibody titres peaked at 5 to 9 weeks after tick infestation but also declined between 30 and 45 weeks. This suggests that MAP 1B-specific IgG antibody responses and antibody responses to other C. ruminantium antigens are down regulated in cattle despite repeated exposure to C. ruminantium via ticks. Significantly, serological responses to the MAP 1B antigen may not be a reliable indicator of C. ruminantium exposure in cattle in areas of endemic heartwater infection. PMID:11238227

Desert Dust Air Mass Mapping in the Western Sahara, using Particle Properties Derived from Space-based Multi-angle Imaging

NASA Technical Reports Server (NTRS)

Kahn, Ralph; Petzold, Andreas; Wendisch, Manfred; Bierwirth, Eike; Dinter, Tilman; Fiebig, Marcus; Schladitz, Alexander; von Hoyningen-Huene, Wolfgang

2008-01-01

Coincident observations made over the Moroccan desert during the SAhara Mineral dUst experiMent (SAMUM) 2006 field campaign are used both to validate aerosol amount and type retrieved from Multi-angle Imaging SpectroRadiometer (MISR) observations, and to place the sub-orbital aerosol measurements into the satellite's larger regional context. On three moderately dusty days for which coincident observations were made, MISR mid-visible aerosol optical thickness (AOT) agrees with field measurements point-by-point to within 0.05 to 0.1. This is about as well as can be expected given spatial sampling differences; the space-based observations capture AOT trends and variability over an extended region. The field data also validate MISR's ability to distinguish and to map aerosol air masses, from the combination of retrieved constraints on particle size, shape, and single-scattering albedo. For the three study days, the satellite observations (a) highlight regional gradients in the mix of dust and background spherical particles, (b) identify a dust plume most likely part of a density flow, and (c) show an air mass containing a higher proportion of small, spherical particles than the surroundings, that appears to be aerosol pollution transported from several thousand kilometers away.

Mapping Ion and Electron Remagnetization Distance in the Reconnection Outflow Exhaust Region with MMS

NASA Astrophysics Data System (ADS)

Sturner, A. P.; Eriksson, S.; Gershman, D. J.; Plaschke, F.; Burch, J.

2017-12-01

Magnetopause current sheets have been fertile ground for understanding kinetic-scale physics of magnetic reconnection, but can also be used to study more macroscopic scale phenomena statistically. Post-reconnection, magnetic flux and plasma are accelerated away from the x-line into exhaust regions. As the exhausting plasma exits the electron diffusion region, electrons become remagnetized and are accelerated by the magnetic field into an E x B jet while the ions remain unmagnetized. Further along the exhaust, at the edge of the ion diffusion region, the ions become frozen into the magnetic field, and are accelerated to join the electrons in the exhaust jet. By assuming a constant reconnection rate of 0.1, we can infer the distance to the x-line from the normal width of the exhaust. We present a statistical study using the Magnetospheric Multiscale Mission (MMS) to map out the electron and ion remagnetization distances that define the edge of the electron and ion diffusion regions for magnetopause reconnection, and explore the effects of a guide magnetic field.

Data-driven mapping of the potential mountain permafrost distribution.

PubMed

Deluigi, Nicola; Lambiel, Christophe; Kanevski, Mikhail

2017-07-15

Existing mountain permafrost distribution models generally offer a good overview of the potential extent of this phenomenon at a regional scale. They are however not always able to reproduce the high spatial discontinuity of permafrost at the micro-scale (scale of a specific landform; ten to several hundreds of meters). To overcome this lack, we tested an alternative modelling approach using three classification algorithms belonging to statistics and machine learning: Logistic regression, Support Vector Machines and Random forests. These supervised learning techniques infer a classification function from labelled training data (pixels of permafrost absence and presence) with the aim of predicting the permafrost occurrence where it is unknown. The research was carried out in a 588km 2 area of the Western Swiss Alps. Permafrost evidences were mapped from ortho-image interpretation (rock glacier inventorying) and field data (mainly geoelectrical and thermal data). The relationship between selected permafrost evidences and permafrost controlling factors was computed with the mentioned techniques. Classification performances, assessed with AUROC, range between 0.81 for Logistic regression, 0.85 with Support Vector Machines and 0.88 with Random forests. The adopted machine learning algorithms have demonstrated to be efficient for permafrost distribution modelling thanks to consistent results compared to the field reality. The high resolution of the input dataset (10m) allows elaborating maps at the micro-scale with a modelled permafrost spatial distribution less optimistic than classic spatial models. Moreover, the probability output of adopted algorithms offers a more precise overview of the potential distribution of mountain permafrost than proposing simple indexes of the permafrost favorability. These encouraging results also open the way to new possibilities of permafrost data analysis and mapping. Copyright © 2017 Elsevier B.V. All rights reserved.

MAPs/bFGF-PLGA microsphere composite-coated titanium surfaces promote increased adhesion and proliferation of fibroblasts.

PubMed

Wang, Zhongshan; Wu, Guofeng; Bai, Shizhu; Feng, Zhihong; Dong, Yan; Zhou, Jian; Qin, Haiyan; Zhao, Yimin

2014-06-01

Infection and epithelial downgrowth are two major problems with maxillofacial transcutaneous implants, and both are mainly due to lack of stable closure of soft tissues at transcutaneous sites. Fibroblasts have been shown to play a key role in the formation of biological seals. In this work, titanium (Ti) model surfaces were coated with mussel adhesive proteins (MAPs) utilizing its unique adhesion ability on diverse inorganic and organic surfaces in wet environments. Prepared basic fibroblast growth factor (bFGF)-poly(lactic-co-glycolic acid) (PLGA) microspheres can be easily synthesized and combined onto MAPs-coated Ti surfaces, due to the negative surface charges of microspheres in aqueous solution, which is in contrast to the positive charges of MAPs. Titanium model surfaces were divided into three groups. Group A: MAPs/bFGF-PLGA microspheres composite-coated Ti surfaces. Group B: MAPs-coated Ti surfaces. Group C: uncoated Ti surfaces. The effects of coated Ti surfaces on adhesion of fibroblasts, cytoskeletal organization, proliferation, and extracellular matrix (ECM)-related gene expressions were examined. The results revealed increased adhesion (P < 0.05), enhanced actin cytoskeletal organization, and up-regulated ECM-related gene expressions in groups A and B compared with group C. Increased proliferation of fibroblasts during five days of incubation was observed in group A compared with groups B and C (P < 0.05). Collectively, the results from this in vitro study demonstrated that MAPs/bFGF-PLGA microspheres composite-coated Ti surfaces had the ability to increase fibroblast functionality. In addition, MAPs/bFGF-PLGA microsphere composite-coated Ti surfaces should be studied further as a method of promoting formation of stable biological seals around transcutaneous sites.

Ionosphere-magnetosphere coupling

NASA Technical Reports Server (NTRS)

Kaufmann, Richard L.

1994-01-01

Principal results are presented for the four papers that were supported from this grant. These papers include: 'Mapping and Energization in the Magnetotail. 1. Magnetospheric Boundaries; 'Mapping and Energization in the Magnetotail. 2. Particle Acceleration'; 'Cross-Tail Current: Resonant Orbits'; and 'Cross-Tail Current, Field-Aligned Current, and B(sub y)'.

Whole-body FDG PET-MR oncologic imaging: pitfalls in clinical interpretation related to inaccurate MR-based attenuation correction.

PubMed

Attenberger, Ulrike; Catana, Ciprian; Chandarana, Hersh; Catalano, Onofrio A; Friedman, Kent; Schonberg, Stefan A; Thrall, James; Salvatore, Marco; Rosen, Bruce R; Guimaraes, Alexander R

2015-08-01

Simultaneous data collection for positron emission tomography and magnetic resonance imaging (PET/MR) is now a reality. While the full benefits of concurrently acquiring PET and MR data and the potential added clinical value are still being evaluated, initial studies have identified several important potential pitfalls in the interpretation of fluorodeoxyglucose (FDG) PET/MRI in oncologic whole-body imaging, the majority of which being related to the errors in the attenuation maps created from the MR data. The purpose of this article was to present such pitfalls and artifacts using case examples, describe their etiology, and discuss strategies to overcome them. Using a case-based approach, we will illustrate artifacts related to (1) Inaccurate bone tissue segmentation; (2) Inaccurate air cavities segmentation; (3) Motion-induced misregistration; (4) RF coils in the PET field of view; (5) B0 field inhomogeneity; (6) B1 field inhomogeneity; (7) Metallic implants; (8) MR contrast agents.

Adaptive Registration of Varying Contrast-Weighted Images for Improved Tissue Characterization (ARCTIC): Application to T1 Mapping

PubMed Central

Roujol, Sébastien; Foppa, Murilo; Weingartner, Sebastian; Manning, Warren J.; Nezafat, Reza

2014-01-01

Purpose To propose and evaluate a novel non-rigid image registration approach for improved myocardial T1 mapping. Methods Myocardial motion is estimated as global affine motion refined by a novel local non-rigid motion estimation algorithm. A variational framework is proposed, which simultaneously estimates motion field and intensity variations, and uses an additional regularization term to constrain the deformation field using automatic feature tracking. The method was evaluated in 29 patients by measuring the DICE similarity coefficient (DSC) and the myocardial boundary error (MBE) in short axis and four chamber data. Each image series was visually assessed as “no motion” or “with motion”. Overall T1 map quality and motion artifacts were assessed in the 85 T1 maps acquired in short axis view using a 4-point scale (1-non diagnostic/severe motion artifact, 4-excellent/no motion artifact). Results Increased DSC (0.78±0.14 to 0.87±0.03, p<0.001), reduced MBE (1.29±0.72mm to 0.84±0.20mm, p<0.001), improved overall T1 map quality (2.86±1.04 to 3.49±0.77, p<0.001), and reduced T1 map motion artifacts (2.51±0.84 to 3.61±0.64, p<0.001) were obtained after motion correction of “with motion” data (~56% of data). Conclusion The proposed non-rigid registration approach reduces the respiratory-induced motion that occurs during breath-hold T1 mapping, and significantly improves T1 map quality. PMID:24798588

High resolution mapping of soil organic carbon stocks using remote sensing variables in the semi-arid rangelands of eastern Australia.

PubMed

Wang, Bin; Waters, Cathy; Orgill, Susan; Gray, Jonathan; Cowie, Annette; Clark, Anthony; Liu, De Li

2018-07-15

Efficient and effective modelling methods to assess soil organic carbon (SOC) stock are central in understanding the global carbon cycle and informing related land management decisions. However, mapping SOC stocks in semi-arid rangelands is challenging due to the lack of data and poor spatial coverage. The use of remote sensing data to provide an indirect measurement of SOC to inform digital soil mapping has the potential to provide more reliable and cost-effective estimates of SOC compared with field-based, direct measurement. Despite this potential, the role of remote sensing data in improving the knowledge of soil information in semi-arid rangelands has not been fully explored. This study firstly investigated the use of high spatial resolution satellite data (seasonal fractional cover data; SFC) together with elevation, lithology, climatic data and observed soil data to map the spatial distribution of SOC at two soil depths (0-5cm and 0-30cm) in semi-arid rangelands of eastern Australia. Overall, model performance statistics showed that random forest (RF) and boosted regression trees (BRT) models performed better than support vector machine (SVM). The models obtained moderate results with R 2 of 0.32 for SOC stock at 0-5cm and 0.44 at 0-30cm, RMSE of 3.51MgCha -1 at 0-5cm and 9.16MgCha -1 at 0-30cm without considering SFC covariates. In contrast, by including SFC, the model accuracy for predicting SOC stock improved by 7.4-12.7% at 0-5cm, and by 2.8-5.9% at 0-30cm, highlighting the importance of including SFC to enhance the performance of the three modelling techniques. Furthermore, our models produced a more accurate and higher resolution digital SOC stock map compared with other available mapping products for the region. The data and high-resolution maps from this study can be used for future soil carbon assessment and monitoring. Copyright © 2018 Elsevier B.V. All rights reserved.

Seismic zoning (first approximation) using data of the main geomagnetic field

NASA Astrophysics Data System (ADS)

Khachikyan, Galina; Zhumabayev, Beibit; Toyshiev, Nursultan; Kairatkyzy, Dina; Seraliyev, Alibek; Khassanov, Eldar

2017-04-01

Seismic zoning is among the most complicated and extremely important problems of modern seismology. In solving this problem, a very important parameter is maximal possible earthquake magnitude (Mmax) which is believed at present depends on horizontal size of geoblocks. At the same time, it was found by Khachikyan et al. [2012, IJG, doi: 10.4236/ijg.2012.35109] that Mmax value in any seismic region may be determined using Z_GSM value that is geomagnetic Z-component in this region estimated in geocentric solar-magnetosphere coordinate system (GSM). On the base of the global seismological catalog NEIC with M≥4.5 for 1973-2010 years, and the International Geomagnetic Reference Field (IGRF) model, an empirical relation was obtained as follows: Mmax= a + b {log[abs(Z_GSM)]}. For the case of the whole planet, obtained empirical coefficients are as follows: a = (5,22 ± 0,17), and b = (0,78 ± 0,06) with correlation coefficient R=0.91, standard deviation SD=0.56, and probability 95%. Further investigations showed that the coefficients of the regression equation are different for different seismically active regions of the planet. For example, to the territory of the San Andreas Fault, defined by the coordinates 30-45N, 105-135W obtained values are as follows: a = (4,04 ± 0.38) and b = (0.7 ± 0.13) with correlation coefficient R = 0.91, standard deviation SD = 0.34, and probability of 95%. For territory of inland seismicity in Eurasia defined by the coordinates 30-45N, 0-110E, a = (12.44 ± 0.48) and b = (1,15 ± 0.2) with correlation coefficient R = 0.87, standard deviation SD = 0.98, and probability of 95%, and for the territory of the strongest seismicity in the world defined by the coordinates 20S-20N, 90-150E, obtained values of a = (- 17.5 ± 1,5) and b = (5,7 ± 0.4) with correlation coefficient R = 0.97, standard deviation SD = 0.4, and probability of 95%. The relationship between the intensity of the main geomagnetic field and released seismic energy is expectable, because both the main geomagnetic field and the tectonic activity of the planet originate from the same source - the convection in the Earth's liquid core. The relationship between earthquake magnitude and geomagnetic Z - component expressed namely in geocentric solar magnetosphere coordinate system (GSM), in which the interaction of the solar wind magnetic field with the geomagnetic field is better ordered, indicates at the external (triggering) earthquake occurrence in the extremely stressed tectonic area. Above empirical relationships may be used (in first approximation) for global seismic zoning and for prediction of possible Mmax, when a place and time of earthquake occurrence are predicted. In report we present global maps of Z_GSM and Mmax estimated for different seasons and different times.

Detailing magnetic field strength dependence and segmental artifact distribution of myocardial effective transverse relaxation rate at 1.5, 3.0, and 7.0 T.

PubMed

Meloni, Antonella; Hezel, Fabian; Positano, Vincenzo; Keilberg, Petra; Pepe, Alessia; Lombardi, Massimo; Niendorf, Thoralf

2014-06-01

Realizing the challenges and opportunities of effective transverse relaxation rate (R2 *) mapping at high and ultrahigh fields, this work examines magnetic field strength (B0 ) dependence and segmental artifact distribution of myocardial R2 * at 1.5, 3.0, and 7.0 T. Healthy subjects were considered. Three short-axis views of the left ventricle were examined. R2 * was calculated for 16 standard myocardial segments. Global and mid-septum R2 * were determined. For each segment, an artifactual factor was estimated as the deviation of segmental from global R2 * value. The global artifactual factor was significantly enlarged at 7.0 T versus 1.5 T (P = 0.010) but not versus 3.0 T. At 7.0 T, the most severe susceptibility artifacts were detected in the inferior lateral wall. The mid-septum showed minor artifactual factors at 7.0 T, similar to those at 1.5 and 3.0 T. Mean R2 * increased linearly with the field strength, with larger changes for global heart R2 * values. At 7.0 T, segmental heart R2 * analysis is challenging due to macroscopic susceptibility artifacts induced by the heart-lung interface and the posterior vein. Myocardial R2 * depends linearly on the magnetic field strength. The increased R2 * sensitivity at 7.0 T might offer means for susceptibility-weighted and oxygenation level-dependent MR imaging of the myocardium. Copyright © 2013 Wiley Periodicals, Inc.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shen, Z; Greskovich, J; Xia, P

Purpose: To generate virtual phantoms with clinically relevant deformation and use them to objectively evaluate geometric and dosimetric uncertainties of deformable image registration (DIR) algorithms. Methods: Ten lung cancer patients undergoing adaptive 3DCRT planning were selected. For each patient, a pair of planning CT (pCT) and replanning CT (rCT) were used as the basis for virtual phantom generation. Manually adjusted meshes were created for selected ROIs (e.g. PTV, lungs, spinal cord, esophagus, and heart) on pCT and rCT. The mesh vertices were input into a thin-plate spline algorithm to generate a reference displacement vector field (DVF). The reference DVF wasmore » used to deform pCT to generate a simulated replanning CT (srCT) that was closely matched to rCT. Three DIR algorithms (Demons, B-Spline, and intensity-based) were applied to these ten virtual phantoms. The images, ROIs, and doses were mapped from pCT to srCT using the DVFs computed by these three DIRs and compared to those mapped using the reference DVF. Results: The average Dice coefficients for selected ROIs were from 0.85 to 0.96 for Demons, from 0.86 to 0.97 for intensity-based, and from 0.76 to 0.95 for B-Spline. The average Hausdorff distances for selected ROIs were from 2.2 to 5.4 mm for Demons, from 2.3 to 6.8 mm for intensity-based, and from 2.4 to 11.4 mm for B-Spline. The average absolute dose errors for selected ROIs were from 0.2 to 0.6 Gy for Demons, from 0.1 to 0.5 Gy for intensity-based, and from 0.5 to 1.5 Gy for B-Spline. Conclusion: Virtual phantoms were modeled after patients with lung cancer and were clinically relevant for adaptive radiotherapy treatment replanning. Virtual phantoms with known DVFs serve as references and can provide a fair comparison when evaluating different DIRs. Demons and intensity-based DIRs were shown to have smaller geometric and dosimetric uncertainties than B-Spline. Z Shen: None; K Bzdusek: an employee of Philips Healthcare; J Greskovich: None; P Xia: received research grants from Philips Healthcare and Siemens Healthcare.« less

Development and management of a geographic information system for health research in a developing-country setting: a case study from Bangladesh.

PubMed

Sugimoto, Jonathan D; Labrique, Alain B; Ahmad, Salahuddin; Rashid, Mahbubur; Klemm, Rolf D W; Christian, Parul; West, Keith P

2007-12-01

In the last decade, geographic information systems (GIS) have become accessible to researchers in developing countries, yet guidance remains sparse for developing a GIS. Drawing on experience in developing a GIS for a large community trial in rural Bangladesh, six stages for constructing, maintaining, and using a GIS for health research purposes were outlined. The system contains 0.25 million landmarks, including 150,000 houses, in an area of 435 sq km with over 650,000 people. Assuming access to reasonably accurate paper boundary maps of the intended working area and the absence of pre-existing digital local-area maps, the six stages are: to (a) digitize and update existing paper maps, (b) join the digitized maps into a large-area map, (c) reference this large-area map to a geographic coordinate system, (d) insert location landmarks of interest, (e) maintain the GIS, and (f) link it to other research databases. These basic steps can produce a household-level, updated, scaleable GIS that can both enhance field efficiency and support epidemiologic analyses of demographic patterns, diseases, and health outcomes.

Development and Management of a Geographic Information System for Health Research in a Developing-country Setting: A Case Study from Bangladesh

PubMed Central

Sugimoto, Jonathan D.; Labrique, Alain B.; Salahuddin, Ahmad; Rashid, Mahbubur; Klemm, Rolf D.W.; Christian, Parul; West, Keith P.

2007-01-01

In the last decade, geographic information systems (GIS) have become accessible to researchers in developing countries, yet guidance remains sparse for developing a GIS. Drawing on experience in developing a GIS for a large community trial in rural Bangladesh, six stages for constructing, maintaining, and using a GIS for health research purposes were outlined. The system contains 0.25 million landmarks, including 150,000 houses, in an area of 435 sq km with over 650,000 people. Assuming access to reasonably accurate paper boundary maps of the intended working area and the absence of pre-existing digital local-area maps, the six stages are: to (a) digitize and update existing paper maps, (b) join the digitized maps into a large-area map, (c) reference this large-area map to a geographic coordinate system, (d) insert location landmarks of interest, (e) maintain the GIS, and (f) link it to other research databases. These basic steps can produce a household-level, updated, scaleable GIS that can both enhance field efficiency and support epidemiologic analyses of demographic patterns, diseases, and health outcomes. PMID:18402187

A comparison of urban heat islands mapped using skin temperature, air temperature, and apparent temperature (Humidex), for the greater Vancouver area.

PubMed

Ho, Hung Chak; Knudby, Anders; Xu, Yongming; Hodul, Matus; Aminipouri, Mehdi

2016-02-15

Apparent temperature is more closely related to mortality during extreme heat events than other temperature variables, yet spatial epidemiology studies typically use skin temperature (also known as land surface temperature) to quantify heat exposure because it is relatively easy to map from satellite data. An empirical approach to map apparent temperature at the neighborhood scale, which relies on publicly available weather station observations and spatial data layers combined in a random forest regression model, was demonstrated for greater Vancouver, Canada. Model errors were acceptable (cross-validated RMSE=2.04 °C) and the resulting map of apparent temperature, calibrated for a typical hot summer day, corresponded well with past temperature research in the area. A comparison with field measurements as well as similar maps of skin temperature and air temperature revealed that skin temperature was poorly correlated with both air temperature (R(2)=0.38) and apparent temperature (R(2)=0.39). While the latter two were more similar (R(2)=0.87), apparent temperature was predicted to exceed air temperature by more than 5 °C in several urban areas as well as around the confluence of the Pitt and Fraser rivers. We conclude that skin temperature is not a suitable proxy for human heat exposure, and that spatial epidemiology studies could benefit from mapping apparent temperature, using an approach similar to the one reported here, to better quantify differences in heat exposure that exist across an urban landscape. Copyright © 2015 Elsevier B.V. All rights reserved.

Converted and upgraded maps programmed in the newer speech processor for the first generation of multichannel cochlear implant.

PubMed

Magalhães, Ana Tereza de Matos; Goffi-Gomez, M Valéria Schmidt; Hoshino, Ana Cristina; Tsuji, Robinson Koji; Bento, Ricardo Ferreira; Brito, Rubens

2013-09-01

To identify the technological contributions of the newer version of speech processor to the first generation of multichannel cochlear implant and the satisfaction of users of the new technology. Among the new features available, we focused on the effect of the frequency allocation table, the T-SPL and C-SPL, and the preprocessing gain adjustments (adaptive dynamic range optimization). Prospective exploratory study. Cochlear implant center at hospital. Cochlear implant users of the Spectra processor with speech recognition in closed set. Seventeen patients were selected between the ages of 15 and 82 and deployed for more than 8 years. The technology update of the speech processor for the Nucleus 22. To determine Freedom's contribution, thresholds and speech perception tests were performed with the last map used with the Spectra and the maps created for Freedom. To identify the effect of the frequency allocation table, both upgraded and converted maps were programmed. One map was programmed with 25 dB T-SPL and 65 dB C-SPL and the other map with adaptive dynamic range optimization. To assess satisfaction, SADL and APHAB were used. All speech perception tests and all sound field thresholds were statistically better with the new speech processor; 64.7% of patients preferred maintaining the same frequency table that was suggested for the older processor. The sound field threshold was statistically significant at 500, 1,000, 1,500, and 2,000 Hz with 25 dB T-SPL/65 dB C-SPL. Regarding patient's satisfaction, there was a statistically significant improvement, only in the subscale of speech in noise abilities and phone use. The new technology improved the performance of patients with the first generation of multichannel cochlear implant.

Spatial attention improves reliability of fMRI retinotopic mapping signals in occipital and parietal cortex

PubMed Central

Bressler, David W.; Silver, Michael A.

2010-01-01

Spatial attention improves visual perception and increases the amplitude of neural responses in visual cortex. In addition, spatial attention tasks and fMRI have been used to discover topographic visual field representations in regions outside visual cortex. We therefore hypothesized that requiring subjects to attend to a retinotopic mapping stimulus would facilitate the characterization of visual field representations in a number of cortical areas. In our study, subjects attended either a central fixation point or a wedge-shaped stimulus that rotated about the fixation point. Response reliability was assessed by computing coherence between the fMRI time series and a sinusoid with the same frequency as the rotating wedge stimulus. When subjects attended to the rotating wedge instead of ignoring it, the reliability of retinotopic mapping signals increased by approximately 50% in early visual cortical areas (V1, V2, V3, V3A/B, V4) and ventral occipital cortex (VO1) and by approximately 75% in lateral occipital (LO1, LO2) and posterior parietal (IPS0, IPS1 and IPS2) cortical areas. Additionally, one 5-minute run of retinotopic mapping in the attention-to-wedge condition produced responses as reliable as the average of three to five (early visual cortex) or more than five (lateral occipital, ventral occipital, and posterior parietal cortex) attention-to-fixation runs. These results demonstrate that allocating attention to the retinotopic mapping stimulus substantially reduces the amount of scanning time needed to determine the visual field representations in occipital and parietal topographic cortical areas. Attention significantly increased response reliability in every cortical area we examined and may therefore be a general mechanism for improving the fidelity of neural representations of sensory stimuli at multiple levels of the cortical processing hierarchy. PMID:20600961

A hot wire radiant energy source for mapping the field of view of a radiometer

NASA Technical Reports Server (NTRS)

Edwards, S. F.; Stewart, W. F.; Vann, D. S.

1977-01-01

The design and performance of a calibration device that allows the measurement of a radiometer's field of view are described. The heart of the device is a heated 0.0254-mm (0.001-inch) diameter filament that provides a variable, isothermal line source of radiant energy against a cold background. By moving this discrete line source across the field of view of a radiometer, the radiometer's spatial response can be completely mapped. The use of a platinum filament provides a durable radiation source whose temperature is stable and repeatable to 10 K over the range of 600 to 1200 K. By varying the energy emitted by the filament, the field of view of radiometers with different sensitivities (or multiple channel radiometers) can be totally mapped.

Mapping QTLs associated with agronomic and physiological traits under terminal drought and heat stress conditions in wheat (Triticum aestivum L.).

PubMed

Tahmasebi, Sirous; Heidari, Bahram; Pakniyat, Hassan; McIntyre, C Lynne

2017-01-01

Wheat crops frequently experience a combination of abiotic stresses in the field, but most quantitative trait loci (QTL) studies have focused on the identification of QTLs for traits under single stress field conditions. A recombinant inbred line (RIL) population derived from SeriM82 × Babax was used to map QTLs under well-irrigated, heat, drought, and a combination of heat and drought stress conditions in two years. A total of 477 DNA markers were used to construct linkage groups that covered 1619.6 cM of the genome, with an average distance of 3.39 cM between adjacent markers. Moderate to relatively high heritability estimates (0.60-0.70) were observed for plant height (PHE), grain yield (YLD), and grain per square meter (GM2). The most important QTLs for days to heading (DHE), thousand grain weight (TGW), and YLD were detected on chromosomes 1B, 1D-a, and 7D-b. The prominent QTLs related to canopy temperature were on 3B. Results showed that common QTLs for DHE, YLD, and TGW on 7D-b were validated in heat and drought trials. Three QTLs for chlorophyll content in SPAD unit (on 1A/6B), leaf rolling (ROL) (on 3B/4A), and GM2 (on 1B/7D-b) showed significant epistasis × environment interaction. Six heat- or drought-specific QTLs (linked to 7D-acc/cat-10, 1B-agc/cta-9, 1A-aag/cta-8, 4A-acg/cta-3, 1B-aca/caa-3, and 1B-agc/cta-9 for day to maturity (DMA), SPAD, spikelet compactness (SCOM), TGW, GM2, and GM2, respectively) were stable and validated over two years. The major DHE QTL linked to 7D-acc/cat-10, with no QTL × environment (QE) interaction increased TGW and YLD. This QTL (5.68 ≤ LOD ≤ 10.5) explained up to 19.6% variation in YLD in drought, heat, and combined stress trials. This marker as a candidate could be used for verification in other populations and identifying superior allelic variations in wheat cultivars or its wild progenitors to increase the efficiency of selection of high yielding lines adapted to end-season heat and drought stress conditions.

Improved determination of vector lithospheric magnetic anomalies from MAGSAT data

NASA Technical Reports Server (NTRS)

Ravat, Dhananjay

1993-01-01

Scientific contributions made in developing new methods to isolate and map vector magnetic anomalies from measurements made by Magsat are described. In addition to the objective of the proposal, the isolation and mapping of equatorial vector lithospheric Magsat anomalies, isolation of polar ionospheric fields during the period were also studied. Significant progress was also made in isolation of polar delta(Z) component and scalar anomalies as well as integration and synthesis of various techniques of removing equatorial and polar ionospheric effects. The significant contributions of this research are: (1) development of empirical/analytical techniques in modeling ionospheric fields in Magsat data and their removal from uncorrected anomalies to obtain better estimates of lithospheric anomalies (this task was accomplished for equatorial delta(X), delta(Z), and delta(B) component and polar delta(Z) and delta(B) component measurements; (2) integration of important processing techniques developed during the last decade with the newly developed technologies of ionospheric field modeling into an optimum processing scheme; and (3) implementation of the above processing scheme to map the most robust magnetic anomalies of the lithosphere (components as well as scalar).

Optimal and fast E/B separation with a dual messenger field

NASA Astrophysics Data System (ADS)

Kodi Ramanah, Doogesh; Lavaux, Guilhem; Wandelt, Benjamin D.

2018-05-01

We adapt our recently proposed dual messenger algorithm for spin field reconstruction and showcase its efficiency and effectiveness in Wiener filtering polarized cosmic microwave background (CMB) maps. Unlike conventional preconditioned conjugate gradient (PCG) solvers, our preconditioner-free technique can deal with high-resolution joint temperature and polarization maps with inhomogeneous noise distributions and arbitrary mask geometries with relative ease. Various convergence diagnostics illustrate the high quality of the dual messenger reconstruction. In contrast, the PCG implementation fails to converge to a reasonable solution for the specific problem considered. The implementation of the dual messenger method is straightforward and guarantees numerical stability and convergence. We show how the algorithm can be modified to generate fluctuation maps, which, combined with the Wiener filter solution, yield unbiased constrained signal realizations, consistent with observed data. This algorithm presents a pathway to exact global analyses of high-resolution and high-sensitivity CMB data for a statistically optimal separation of E and B modes. It is therefore relevant for current and next-generation CMB experiments, in the quest for the elusive primordial B-mode signal.

Identification and evaluation of resistance to powdery mildew and yellow rust in a wheat mapping population

PubMed Central

Zhang, Xu; Wang, Jirui; Luo, Mingcheng; Yang, Mujun; Wang, Hua; Xiang, Libo; Zeng, Fansong; Yu, Dazhao; Fu, Daolin

2017-01-01

Deployment of cultivars with genetic resistance is an effective approach to control the diseases of powdery mildew (PM) and yellow rust (YR). Chinese wheat cultivar XK0106 exhibits high levels of resistance to both diseases, while cultivar E07901 has partial, adult plant resistance (APR). The aim of this study was to map resistance loci derived from the two cultivars and analyze their effects against PM and YR in a range of environments. A doubled haploid population (388 lines) was used to develop a framework map consisting of 117 SSR markers, while a much higher density map using the 90K Illumina iSelect SNP array was produced with a subset of 80 randomly selected lines. Seedling resistance was characterized against a range of PM and YR isolates, while field scores in multiple environments were used to characterize APR. Composite interval mapping (CIM) of seedling PM scores identified two QTLs (QPm.haas-6A and QPm.haas-2A), the former being located at the Pm21 locus. These QTLs were also significant in field scores, as were Qpm.haas-3A and QPm.haas-5A. QYr.haas-1B-1 and QYr.haas-2A were identified in field scores of YR and were located at the Yr24/26 and Yr17 chromosomal regions respectively. A second 1B QTL, QYr.haas-1B-2 was also identified. QPm.haas-2A and QYr.haas-1B-2 are likely to be new QTLs that have not been previously identified. Effects of the QTLs were further investigated in multiple environments through the testing of selected lines predicted to contain various QTL combinations. Significant additive interactions between the PM QTLs highlighted the ability to pyramid these loci to provide higher level of resistance. Interactions between the YR QTLs gave insights into the pathogen populations in the different locations as well as showing genetic interactions between these loci. PMID:28542459

Amide proton transfer imaging of brain tumors using a self-corrected 3D fast spin-echo dixon method: Comparison With separate B0 correction.

PubMed

Togao, Osamu; Keupp, Jochen; Hiwatashi, Akio; Yamashita, Koji; Kikuchi, Kazufumi; Yoneyama, Masami; Honda, Hiroshi

2017-06-01

To assess the quantitative performance of three-dimensional (3D) fast spin-echo (FSE) Dixon amide proton transfer (APT) imaging of brain tumors compared with B 0 correction with separate mapping methods. Twenty-two patients with brain tumors (54.2 ± 18.7 years old, 12 males and 10 females) were scanned at 3 Tesla (T). Z-spectra were obtained at seven different frequency offsets at ±3.1 ppm, ± 3.5 ppm, ± 3.9 ppm, and -1560 ppm. The scan was repeated three times at +3.5 ppm with echo shifts for Dixon B 0 mapping. The APT image corrected by a three-point Dixon-type B 0 map from the same scan (3D-Dixon) or a separate B 0 map (2D-separate and 3D-separate), and an uncorrected APT image (3D-uncorrected) were generated. We compared the APT-weighted signals within a tumor obtained with each 3D method with those obtained with 2D-separate as a reference standard. Excellent agreements and correlations with the 2D-separate were obtained by the 3D-Dixon method for both mean (ICC = 0.964, r = 0.93, P < 0.0001) and 90th-percentile (ICC = 0.972, r = 0.95, P < 0.0001) APT-weighted signals. These agreements and correlations for 3D-Dixon were better than those obtained by the 3D-uncorrected and 3D-separate methods. The 3D FSE Dixon APT method with intrinsic B 0 correction offers a quantitative performance that is similar to that of established two-dimensional (2D) methods. Magn Reson Med 77:2272-2279, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Acrylamide inhibits cellular differentiation of human neuroblastoma and glioblastoma cells.

PubMed

Chen, Jong-Hang; Chou, Chin-Cheng

2015-08-01

This study explores human neuroblastoma (SH-SY5Y) and human glioblastoma (U-1240 MG) cellular differentiation changes under exposure to acrylamide (ACR). Differentiation of SH-SY5Y and U-1240 MG cells were induced by retinoic acid (RA) and butyric acid (BA), respectively. Morphological observations and MTT assay showed that the induced cellular differentiation and cell proliferation were inhibited by ACR in a time- and dose-dependent manner. ACR co-treatment with RA attenuated SH-SY5Y expressions of neurofilament protein-L (NF-L), microtubule-associated protein 1b (MAP1b; 1.2 to 0.7, p < 0.001), MAP2c (2.2 to 0.8, p < 0.05), and Janus kinase1 (JAK1; 1.9 to 0.6, p < 0.001), while ACR co-treatment with BA attenuated U-1240 MG expressions of glial fibrillary acidic protein (GFAP), MAP1b (1.2 to 0.6, p < 0.001), MAP2c (1.5 to 0.7, p < 0.01), and JAK1 (2.1 to 0.5, p < 0.001), respectively. ACR also decreased the phosphorylation of extracellular-signal-regulated kinases (ERK) and c-Jun N-terminal kinases (JNK) in U-1240 MG cells, while caffeine reversed this suppression of ERK and JNK phosphorylation caused by ACR treatment. These results showed that RA-induced neurogenesis of SH-SY5Y and BA-induced astrogliogenesis of U-1240 MG cells were attenuated by ACR and were associated with down-regulation of MAPs expression and JAK-STAT signaling. Copyright © 2015 Elsevier Ltd. All rights reserved.

A pseudoinverse deformation vector field generator and its applications

PubMed Central

Yan, C.; Zhong, H.; Murphy, M.; Weiss, E.; Siebers, J. V.

2010-01-01

Purpose: To present, implement, and test a self-consistent pseudoinverse displacement vector field (PIDVF) generator, which preserves the location of information mapped back-and-forth between image sets. Methods: The algorithm is an iterative scheme based on nearest neighbor interpolation and a subsequent iterative search. Performance of the algorithm is benchmarked using a lung 4DCT data set with six CT images from different breathing phases and eight CT images for a single prostrate patient acquired on different days. A diffeomorphic deformable image registration is used to validate our PIDVFs. Additionally, the PIDVF is used to measure the self-consistency of two nondiffeomorphic algorithms which do not use a self-consistency constraint: The ITK Demons algorithm for the lung patient images and an in-house B-Spline algorithm for the prostate patient images. Both Demons and B-Spline have been QAed through contour comparison. Self-consistency is determined by using a DIR to generate a displacement vector field (DVF) between reference image R and study image S (DVFR–S). The same DIR is used to generate DVFS–R. Additionally, our PIDVF generator is used to create PIDVFS–R. Back-and-forth mapping of a set of points (used as surrogates of contours) using DVFR–S and DVFS–R is compared to back-and-forth mapping performed with DVFR–S and PIDVFS–R. The Euclidean distances between the original unmapped points and the mapped points are used as a self-consistency measure. Results: Test results demonstrate that the consistency error observed in back-and-forth mappings can be reduced two to nine times in point mapping and 1.5 to three times in dose mapping when the PIDVF is used in place of the B-Spline algorithm. These self-consistency improvements are not affected by the exchanging of R and S. It is also demonstrated that differences between DVFS–R and PIDVFS–R can be used as a criteria to check the quality of the DVF. Conclusions: Use of DVF and its PIDVF will improve the self-consistency of points, contour, and dose mappings in image guided adaptive therapy. PMID:20384247

Knockdown of tyrosine hydroxylase in the nucleus of the solitary tract reduces elevated blood pressure during chronic intermittent hypoxia.

PubMed

Bathina, Chandra Sekhar; Rajulapati, Anuradha; Franzke, Michelle; Yamamoto, Kenta; Cunningham, J Thomas; Mifflin, Steve

2013-11-01

Noradrenergic A2 neurons in nucleus tractus solitarius (NTS) respond to stressors such as hypoxia. We hypothesize that tyrosine hydroxylase (TH) knockdown in NTS reduces cardiovascular responses to chronic intermittent hypoxia (CIH), a model of the arterial hypoxemia observed during sleep apnea in humans. Adult male Sprague-Dawley rats were implanted with radiotelemetry transmitters and adeno-associated viral constructs with green fluorescent protein (GFP) reporter having either short hairpin RNA (shRNA) for TH or scrambled virus (scRNA) were injected into caudal NTS. Virus-injected rats were exposed to 7 days of CIH (alternating periods of 10% O2 and of 21% O2 from 8 AM to 4 PM; from 4 PM to 8 AM rats were exposed to 21% O2). CIH increased mean arterial pressure (MAP) and heart rate (HR) during the day in both the scRNA (n = 14, P < 0.001 MAP and HR) and shRNA (n = 13, P < 0.001 MAP and HR) groups. During the night, MAP and HR remained elevated in the scRNA rats (P < 0.001 MAP and HR) but not in the shRNA group. TH immunoreactivity and protein were reduced in the shRNA group. FosB/ΔFosB immunoreactivity was decreased in paraventricular nucleus (PVN) of shRNA group (P < 0.001). However, the shRNA group did not show any change in the FosB/ΔFosB immunoreactivity in the rostral ventrolateral medulla. Exposure to CIH increased MAP which persisted beyond the period of exposure to CIH. Knockdown of TH in the NTS reduced this CIH-induced persistent increase in MAP and reduced the transcriptional activation of PVN. This indicates that NTS A2 neurons play a role in the cardiovascular responses to CIH.

A comparative quantitative analysis of magnetic susceptibility artifacts in echo planar and PROPELLER diffusion-weighted images

NASA Astrophysics Data System (ADS)

Cho, Jae-Hwan; Lee, Hae-Kag; Yang, Han-Joon; Lee, Gui-Won; Park, Yong-Soon; Chung, Woon-Kwan

2013-01-01

In this study, the authors investigated whether periodically-rotated overlapping parallel lines with enhanced reconstruction (PROPELLER) diffusion-weighted imaging (DWI) can remove magnetic susceptibility artifacts and compared apparent diffusion coefficient (ADC) values for PROPELLER DWI and the common echo planar (EP) DWI. Twenty patients that underwent brain MRI with a metal dental implant were selected. A 3.0T MR scanner was then used to obtain EP DWI, PROPELLER DWI, and corresponding apparent diffusion coefficient (ADC) maps for a b-value of 0 and 1,000 s/mm2. The frequencies of magnetic susceptibility artifacts in four parts of the brain (bilateral temporal lobes, pons, and orbit) were selected. In the ADC maps, we measured the ADC values of both sides of the temporal lobe and the pons. According to the study results, the frequency of magnetic susceptibility artifacts in PROPELLER DW images was lower than it was in EP DW images. In ADC maps, the ADC values of the bilateral temporal lobes and the pons were all higher in PROPELLER ADC maps than in EP ADC maps. Our findings show that when a high-field MRI machine is used, magnetic susceptibility artifacts can distort anatomical structures and produce high-intensity signals. Furthermore, our findings suggest that in many cases, PROPELLER DWI would be helpful in terms of achieving a correct diagnosis.

Use of the concept mapping in teaching during a medical rotation of interns: an exploratory study.

PubMed

Kwas, Hamida; Ghédira, Habib

2017-12-01

Concept mapping is an excellent learning toolallowing to stimulate active learning.For this reason, the concept mapping is currently used increasingly in the medical and paramedical field. The aim of our study is to determine the contribution of teaching of medical interns by the concept mapping. Fourteen students enrolled at the same time in a medical rotation in Pulmonology were recruited for this exploratory study. Interns are divided into two groups (A and B).Both groups are taught by the clinical case method, illustrated by a concept mapping for group A interns. The evolution of the knowledge accuracy at post-testing has been greater in the group taught by the method of concept mapping: the number of correct responses increased in all participants of group A versus only 4 of group B. All students taught by concept mapping had at the post-test a note higher than or equal to 10/20 versus only three of the group taught by the method without concept map. The average score was 13 (11-15) in group A versus 10.28 (6-14) in group B. We emphasize the use of concept mapping in teaching especially in the faculty of medicine and we encourage clinicians to use this method in teaching interns in the hospital.

Electrostatic frequency maps for amide-I mode of β-peptide: Comparison of molecular mechanics force field and DFT calculations.

PubMed

Cai, Kaicong; Zheng, Xuan; Du, Fenfen

2017-08-05

The spectroscopy of amide-I vibrations has been widely utilized for the understanding of dynamical structure of polypeptides. For the modeling of amide-I spectra, two frequency maps were built for β-peptide analogue (N-ethylpropionamide, NEPA) in a number of solvents within different schemes (molecular mechanics force field based, GM map; DFT calculation based, GD map), respectively. The electrostatic potentials on the amide unit that originated from solvents and peptide backbone were correlated to the amide-I frequency shift from gas phase to solution phase during map parameterization. GM map is easier to construct with negligible computational cost since the frequency calculations for the samples are purely based on force field, while GD map utilizes sophisticated DFT calculations on the representative solute-solvent clusters and brings insight into the electronic structures of solvated NEPA and its chemical environments. The results show that the maps' predicted amide-I frequencies present solvation environmental sensitivities and exhibit their specific characters with respect to the map protocols, and the obtained vibrational parameters are in satisfactory agreement with experimental amide-I spectra of NEPA in solution phase. Although different theoretical schemes based maps have their advantages and disadvantages, the present maps show their potentials in interpreting the amide-I spectra for β-peptides, respectively. Copyright © 2017 Elsevier B.V. All rights reserved.

Probing the initial conditions of star formation: the structure of the prestellar core L 1689B.

NASA Astrophysics Data System (ADS)

Andre, P.; Ward-Thompson, D.; Motte, F.

1996-10-01

In a recent JCMT submillimeter study, Ward-Thompson et al. (1994MNRAS.268..276W) obtained the first dust continuum maps of five low-mass dense cores among the sample of starless ammonia cores from Myers and colleagues. Here, we present the results of new 1.3mm continuum mapping observations for one of these cores, L 1689B, taken with the IRAM 30-m telescope equipped with the 7-channel and 19-channel MPIfR bolometer arrays. The new 1.3mm data, which were obtained in the `on-the-fly' scanning mode, have better angular resolution and sensitivity than the earlier 800 μm data, reaching an rms noise level of ~3mJy/13"beam. Our IRAM map resolves L 1689B as an east-west elongated core of deconvolved size 0.045pcx0.067pc (FWHM), central column density N_H_2__~1.5x10^22^cm^-2^, and mass M_FWHM_~0.6Msun_, in good agreement with our previous JCMT estimates. We confirm that the radial column density profile N(θ) of L 1689B is not consistent with a single power law with angular radius θ but flattens out near its centre. Comparison with synthetic model profiles simulating our `on-the-fly' observations indicates that N(θ_maj_) {prop.to}θ_maj_^-0.2^ for θ_maj_<=25" and N(θ_maj_) {prop.to}θ_maj_^-1^ for 25"<θ_maj_<=90", where θ_maj_ is measured along the major axis of the core. The observed mean profile is not consistent with a simple Gaussian source, being flatter than a Gaussian in its outer region. However, the profile measured along the minor axis of L 1689B is significantly steeper and apparently consistent with a Gaussian `edge' in the north-south direction. The mass, radius, and density of the relatively flat central region are estimated to be ~0.3Msun_, ~4000AU, and ~2x10^5^cm^-3^, respectively. The mass of L 1689B and its large (>30) density contrast with the surrounding molecular cloud indicate that it is not a transient structure but a self-gravitating pre-stellar core. The flat inner profile and other measured characteristics of L 1689B are roughly consistent with theoretical predictions for a magnetically-supported, flattened core either on the verge of collapse or in an early phase of dynamical contraction. In this case, the mean magnetic field in the central region should be <~80μG, which is high but not inconsistent with existing observational constraints. Alternatively, the observed core structure may also be explained by equilibrium models of primarily thermally supported, self-gravitating spheroids interacting with an external UV radiation field. The present study supports the conclusions of our previous JCMT survey and suggests that, in contrast with protostellar envelopes, most pre-stellar cores have flat inner density gradients which approach ρ(r) {prop.to}r^-2^ only beyond a few thousand AU. This implies that, in some cases at least, the initial conditions for protostellar collapse depart significantly from a singular isothermal sphere.

Computed inverse resonance imaging for magnetic susceptibility map reconstruction.

PubMed

Chen, Zikuan; Calhoun, Vince

2012-01-01

This article reports a computed inverse magnetic resonance imaging (CIMRI) model for reconstructing the magnetic susceptibility source from MRI data using a 2-step computational approach. The forward T2*-weighted MRI (T2*MRI) process is broken down into 2 steps: (1) from magnetic susceptibility source to field map establishment via magnetization in the main field and (2) from field map to MR image formation by intravoxel dephasing average. The proposed CIMRI model includes 2 inverse steps to reverse the T2*MRI procedure: field map calculation from MR-phase image and susceptibility source calculation from the field map. The inverse step from field map to susceptibility map is a 3-dimensional ill-posed deconvolution problem, which can be solved with 3 kinds of approaches: the Tikhonov-regularized matrix inverse, inverse filtering with a truncated filter, and total variation (TV) iteration. By numerical simulation, we validate the CIMRI model by comparing the reconstructed susceptibility maps for a predefined susceptibility source. Numerical simulations of CIMRI show that the split Bregman TV iteration solver can reconstruct the susceptibility map from an MR-phase image with high fidelity (spatial correlation ≈ 0.99). The split Bregman TV iteration solver includes noise reduction, edge preservation, and image energy conservation. For applications to brain susceptibility reconstruction, it is important to calibrate the TV iteration program by selecting suitable values of the regularization parameter. The proposed CIMRI model can reconstruct the magnetic susceptibility source of T2*MRI by 2 computational steps: calculating the field map from the phase image and reconstructing the susceptibility map from the field map. The crux of CIMRI lies in an ill-posed 3-dimensional deconvolution problem, which can be effectively solved by the split Bregman TV iteration algorithm.

On the calibration of the COBE/IRAS dust emission reddening maps

NASA Astrophysics Data System (ADS)

Dutra, C. M.; Ahumada, A. V.; Clariá, J. J.; Bica, E.; Barbuy, B.

2003-09-01

In this work we study the spectral properties (3600-6800 Å) of the nuclear region of early-type galaxies at low (|b|<25deg), intermediate (including surroundings of the Magellanic Clouds) and high (South Polar Cap) Galactic latitudes. We determine the E(B-V) reddening values of the galaxies by matching their continuum distribution with respect to those of reddening-free spectral galaxy templates with similar stellar populations. We also compare the spectroscopic reddening value of each galaxy with that derived from 100 mu m dust emission (E(B-V)FIR) in its line of sight, and we find that there is agreement up to E(B-V)=0.25. Beyond this limit E(B-V)FIR values are higher. Taking into account the data up to E(B-V) ~ 0.7, we derive a calibration factor of 0.016 between the spectroscopic E(B-V) values and Schlegel et al.'s (\\cite{Schlegel1998}) opacities. By combining this result with an AK extinction map built within ten degrees of the Galactic centre using Bulge giants as probes (Dutra et al. \\cite{Dutra2003}), we extended the calibration of dust emission reddening maps to low Galactic latitudes down to |b|=4deg and E(B-V)= 1.6 (AV ~ 5). According to this new calibration, a multiplicative factor of ~0.75 must be applied to the COBE/IRAS dust emission reddening maps. Based on observations made at Complejo Astronómico El Leoncito, which is operated under agreement between the Consejo Nacional de Investigaciones Científicas y Técnicas de la República Argentina and the National Universities of La Pata, Córdoba and San Juan, Argentina.

Mapping B(1)-induced eddy current effects near metallic structures in MR images: a comparison of simulation and experiment.

PubMed

Vashaee, S; Goora, F; Britton, M M; Newling, B; Balcom, B J

2015-01-01

Magnetic resonance imaging (MRI) in the presence of metallic structures is very common in medical and non-medical fields. Metallic structures cause MRI image distortions by three mechanisms: (1) static field distortion through magnetic susceptibility mismatch, (2) eddy currents induced by switched magnetic field gradients and (3) radio frequency (RF) induced eddy currents. Single point ramped imaging with T1 enhancement (SPRITE) MRI measurements are largely immune to susceptibility and gradient induced eddy current artifacts. As a result, one can isolate the effects of metal objects on the RF field. The RF field affects both the excitation and detection of the magnetic resonance (MR) signal. This is challenging with conventional MRI methods, which cannot readily separate the three effects. RF induced MRI artifacts were investigated experimentally at 2.4 T by analyzing image distortions surrounding two geometrically identical metallic strips of aluminum and lead. The strips were immersed in agar gel doped with contrast agent and imaged employing the conical SPRITE sequence. B1 mapping with pure phase encode SPRITE was employed to measure the B1 field around the strips of metal. The strip geometry was chosen to mimic metal electrodes employed in electrochemistry studies. Simulations are employed to investigate the RF field induced eddy currents in the two metallic strips. The RF simulation results are in good agreement with experimental results. Experimental and simulation results show that the metal has a pronounced effect on the B1 distribution and B1 amplitude in the surrounding space. The electrical conductivity of the metal has a minimal effect. Copyright © 2014 Elsevier Inc. All rights reserved.

Lithologic, age group, magnetopolarity, and geochemical maps of the Springerville Volcanic Field, east-central Arizona

USGS Publications Warehouse

Condit, Christopher D.; Crumpler, Larry S.; Aubele, Jayne C.

1999-01-01

The Springerville volcanic field is one of the many late Pliocene to Holocene, mostly basaltic, volcanic fields present near the Colorado Plateau margin (fig. 1, in pamphlet). The field overlies the lithospheric transition zone between the Colorado Plateau and the Basin and Range Province (Condit and others, 1989b). Establishing relations in time, space, and composition of the rocks of these plateau-margin fields offers the possibility to integrate more fully into a regional synthesis the detailed geochemistry of these fields now being examined (for example, Perry and others, 1987; Fitton and others, 1988; Menzies and others, 1991). The work also provides baseline information for understanding mantle properties and processes at different depths and locations. Because the Springerville field is the southernmost of the plateau-margin fields, and because it contains both tholeiitic and alkalic rocks (tables 1 and 2, in pamphlet), it is a particularly important location for establishing these patterns in time, space, and composition. Our four thematic maps of the Springerville field were compiled by using digital mapping techniques so that associated petrologic and chemical data could be conveniently included in a geographic information system for one of the plateau-margin fields. Parts of these maps have been included in Condit (1995), a stand-alone Macintosh2 computer program that takes advantage of their digital format.

Scanning micro-Hall probe mapping of magnetic flux distributions and current densities in YBa2Cu3O7 thin films

NASA Technical Reports Server (NTRS)

Xing, W.; Heinrich, B.; Zhou, HU; Fife, A. A.; Cragg, A. R.; Grant, P. D.

1995-01-01

Mapping of the magnetic flux density B(sub z) (perpendicular to the film plane) for a YBa2Cu3O7 thin-film sample was carried out using a scanning micro-Hall probe. The sheet magnetization and sheet current densities were calculated from the B(sub z) distributions. From the known sheet magnetization, the tangential (B(sub x,y)) and normal components of the flux density B were calculated in the vicinity of the film. It was found that the sheet current density was mostly determined by 2B(sub x,y)/d, where d is the film thickness. The evolution of flux penetration as a function of applied field will be shown.

Wide field polarimetry around the Perseus cluster at 350 MHz

NASA Astrophysics Data System (ADS)

Brentjens, M. A.

2011-02-01

Aims: This paper investigates the fascinating diffuse polarization structures at 350 MHz that have previously been tentatively attributed to the Perseus cluster and, more specifically, tries to find out whether the structures are located at (or near) the Perseus cluster, or in the Milky Way. Methods: A wide field, eight point Westerbork Synthesis Radio Telescope mosaic of the area around the Perseus cluster was observed in full polarization. The frequency range was 324 to 378 MHz and the resolution of the polarization maps was 2' × 3'. The maps were processed using Faraday rotation measure synthesis to counter bandwidth depolarization. The RM-cube covers Faraday depths of -384 to +381 rad m-2 in steps of 3 rad m-2. Results: There is emission all over the field at Faraday depths between -50 and +100 rad m-2. All previously observed structures were detected. However, no compelling evidence was found supporting association of those structures with either the Perseus cluster or large scale structure formation gas flows in the Perseus-Pisces super cluster. On the contrary, one of the structures is clearly associated with a Galactic depolarization canal at 1.41 GHz. Another large structure in polarized intensity, as well as Faraday depth at a Faraday depth of +30 rad m-2, coincides with a dark object in WHAM Hα maps at a kinematic distance of 0.5 ± 0.5 kpc. All diffuse polarized emission at 350 MHz towards the Perseus cluster is most likely located within 1 kpc from the Sun. The layers that emit the polarized radiation are less than 40 pc/|B_∥| thick. Appendix is only available in electronic form at http://www.aanda.org

Magneto-optical study of Ba(Fe{sub 1-x}M{sub x}{sub 2}As{sub2} (M = Co and Ni) single crystals irradiated with heavy ions.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Prozorov, R.; Tanatar, M. A.; Roy, B.

Optimally doped single crystals of Ba(Fe{sub 1-x}M{sub x}){sub 2}As{sub 2} (M=Co, Ni) were irradiated with 1.4 GeV {sup 208}Pb{sup 56+} ions at fluences corresponding to matching fields of B{phi} = 0.1, 0.5, 1, and 2 T. Magneto-optical imaging has been used to map the distribution of the magnetic induction in the irradiated samples. The imaging is complemented by the magnetization measurements. The results show a substantial enhancement of the apparent critical current densities as revealed by the much larger Bean penetration fields and an increase in the hysteretic magnetization. However, the effect depends on the compound, temperature, and applied magneticmore » field. In Ba(Fe{sub 0.926}Co{sub 0.074}){sub 2}As{sub 2} crystals, at 15 K and low fields, the enhancement appears to scale with the irradiation dose at a rate of about 0.27 MA {center_dot} cm{sup -2} T{sup -1}, whereas in Ba(Fe{sub 0.954}Ni{sub 0.046}){sub 2}As{sub 2} crystals, higher irradiation doses are less effective. Our results suggest that moderate irradiation with heavy ions is an effective way to homogeneously enhance the current-currying capabilities of pnictide superconductors.« less

Calculation of stochastic broadening due to noise and field errors in the simple map in action-angle coordinates

NASA Astrophysics Data System (ADS)

Hinton, Courtney; Punjabi, Alkesh; Ali, Halima

2008-11-01

The simple map is the simplest map that has topology of divertor tokamaks [1]. Recently, the action-angle coordinates for simple map are analytically calculated, and simple map is constructed in action-angle coordinates [2]. Action-angle coordinates for simple map can not be inverted to real space coordinates (R,Z). Because there is logarithmic singularity on the ideal separatrix, trajectories can not cross separatrix [2]. Simple map in action-angle coordinates is applied to calculate stochastic broadening due to magnetic noise and field errors. Mode numbers for noise + field errors from the DIII-D tokamak are used. Mode numbers are (m,n)=(3,1), (4,1), (6,2), (7,2), (8,2), (9,3), (10,3), (11,3), (12,3) [3]. The common amplitude δ is varied from 0.8X10-5 to 2.0X10-5. For this noise and field errors, the width of stochastic layer in simple map is calculated. This work is supported by US Department of Energy grants DE-FG02-07ER54937, DE-FG02-01ER54624 and DE-FG02-04ER54793 1. A. Punjabi, H. Ali, T. Evans, and A. Boozer, Phys. Let. A 364, 140--145 (2007). 2. O. Kerwin, A. Punjabi, and H. Ali, to appear in Physics of Plasmas. 3. A. Punjabi and H. Ali, P1.012, 35^th EPS Conference on Plasma Physics, June 9-13, 2008, Hersonissos, Crete, Greece.

VizieR Online Data Catalog: HIP and TGAS stars reddening and extinction (Gontcharov+ 2018)

NASA Astrophysics Data System (ADS)

Gontcharov, G. A.; Mosenkov, A. V.

2018-01-01

These are the reddening, interstellar extinction and extinction-to-reddening ratio estimates interpolated for 730,496 Gaia DR1 TGAS and Hipparcos stars within 415 pc from the Sun based on the 3D reddening map of Gontcharov (J/PAZh/43/521) and 3D extinction-to-reddening (total-to-selective extinction) ratio Rv=Av/E(B-V) map of Gontcharov (J/PAZh/38/15). For 711,237 Gaia DR1 TGAS stars the rMoMW distances from Astraatmadja and Bailer-Jones (2016ApJ...833..119A, Cat. J/ApJ/833/119) are used. For 19,259 Hipparcos stars, not in Gaia DR1 TGAS, the distances as the inversion of Hipparcos (I/311) parallaxes are used. The E(B-V) are calculated from initial E(J-Ks) as E(B-V)=E(J-Ks)*(0.047X3-0.1X2-0.09X+1.74), where X=(BT-VT) (B_T and V_T Tycho-2 bands) following the extinction law. This refined relation supersedes E(B-V)=1.655E(J-Ks) in the original 3D reddening map of Gontcharov. The Rv are interpolated from the 3D map of Rv of Gontcharov (2012AstL...38...12G, 2012PAZh...38...15G, Cat. J/PAZh/38/15). The Av are the product of E(B-V) and Rv. (2 data files).

Quantifying rooting at depth in a wheat doubled haploid population with introgression from wild emmer.

PubMed

Clarke, Christina K; Gregory, Peter J; Lukac, Martin; Burridge, Amanda J; Allen, Alexandra M; Edwards, Keith J; Gooding, Mike J

2017-09-01

The genetic basis of increased rooting below the plough layer, post-anthesis in the field, of an elite wheat line (Triticum aestivum 'Shamrock') with recent introgression from wild emmer (T. dicoccoides), is investigated. Shamrock has a non-glaucous canopy phenotype mapped to the short arm of chromosome 2B (2BS), derived from the wild emmer. A secondary aim was to determine whether genetic effects found in the field could have been predicted by other assessment methods. Roots of doubled haploid (DH) lines from a winter wheat ('Shamrock' × 'Shango') population were assessed using a seedling screen in moist paper rolls, in rhizotrons to the end of tillering, and in the field post-anthesis. A linkage map was produced using single nucleotide polymorphism markers to identify quantitative trait loci (QTLs) for rooting traits. Shamrock had greater root length density (RLD) at depth than Shango, in the field and within the rhizotrons. The DH population exhibited diversity for rooting traits within the three environments studied. QTLs were identified on chromosomes 5D, 6B and 7B, explaining variation in RLD post-anthesis in the field. Effects associated with the non-glaucous trait on RLD interacted significantly with depth in the field, and some of this interaction mapped to 2BS. The effect of genotype was strongly influenced by the method of root assessment, e.g. glaucousness expressed in the field was negatively associated with root length in the rhizotrons, but positively associated with length in the seedling screen. To our knowledge, this is the first study to identify QTLs for rooting at depth in field-grown wheat at mature growth stages. Within the population studied here, our results are consistent with the hypothesis that some of the variation in rooting is associated with recent introgression from wild emmer. The expression of genetic effects differed between the methods of root assessment. © The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company.

SU-E-J-233: Effect of Brachytherapy Seed Artifacts in T2 and Proton Density Maps in MR Images

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mashouf, S; University of Toronto, Dept of Radiation Oncology, Toronto, Ontario; Fatemi-Ardekani, A

Purpose: This study aims at investigating the influence of brachytherapy seeds on T2 and proton density (PD) maps generated from MR images. Proton density maps can be used to extract water content. Since dose absorbed in tissue surrounding low energy brachytherapy seeds are highly influenced by tissue composition, knowing the water content is a first step towards implementing a heterogeneity correction algorithm using MR images. Methods: An LDR brachytherapy (IsoAid Advantage Pd-103) seed was placed in the middle of an agar-based gel phantom and imaged using a 3T Philips MR scanner with a 168-channel head coil. A multiple echo sequencemore » with TE=20, 40, 60, 80, 100 (ms) with large repetition time (TR=6259ms) was used to extract T2 and PD maps. Results: Seed artifacts were considerably reduced on T2 maps compared to PD maps. The variation of PD around the mean was obtained as −97% to 125% (±1%) while for T2 it was recorded as −71% to 24% (±1%). Conclusion: PD maps which are required for heterogeneity corrections are susceptible to artifacts from seeds. Seed artifacts on T2 maps, however, are significantly reduced due to not being sensitive to B0 field variation.« less

Estimating net solar radiation using Landsat Thematic Mapper and digital elevation data

NASA Technical Reports Server (NTRS)

Dubayah, R.

1992-01-01

A radiative transfer algorithm is combined with digital elevation and satellite reflectance data to model spatial variability in net solar radiation at fine spatial resolution. The method is applied to the tall-grass prairie of the 16 x 16 sq km FIFE site (First ISLSCP Field Experiment) of the International Satellite Land Surface Climatology Project. Spectral reflectances as measured by the Landsat Thematic Mapper (TM) are corrected for atmospheric and topographic effects using field measurements and accurate 30-m digital elevation data in a detailed model of atmosphere-surface interaction. The spectral reflectances are then integrated to produce estimates of surface albedo in the range 0.3-3.0 microns. This map of albedo is used in an atmospheric and topographic radiative transfer model to produce a map of net solar radiation. A map of apparent net solar radiation is also derived using only the TM reflectance data, uncorrected for topography, and the average field-measured downwelling solar irradiance. Comparison with field measurements at 10 sites on the prairie shows that the topographically derived radiation map accurately captures the spatial variability in net solar radiation, but the apparent map does not.

Accuracy and precision of stream reach water surface slopes estimated in the field and from maps

USGS Publications Warehouse

Isaak, D.J.; Hubert, W.A.; Krueger, K.L.

1999-01-01

The accuracy and precision of five tools used to measure stream water surface slope (WSS) were evaluated. Water surface slopes estimated in the field with a clinometer or from topographic maps used in conjunction with a map wheel or geographic information system (GIS) were significantly higher than WSS estimated in the field with a surveying level (biases of 34, 41, and 53%, respectively). Accuracy of WSS estimates obtained with an Abney level did not differ from surveying level estimates, but conclusions regarding the accuracy of Abney levels and clinometers were weakened by intratool variability. The surveying level estimated WSS most precisely (coefficient of variation [CV] = 0.26%), followed by the GIS (CV = 1.87%), map wheel (CV = 6.18%), Abney level (CV = 13.68%), and clinometer (CV = 21.57%). Estimates of WSS measured in the field with an Abney level and estimated for the same reaches with a GIS used in conjunction with l:24,000-scale topographic maps were significantly correlated (r = 0.86), but there was a tendency for the GIS to overestimate WSS. Detailed accounts of the methods used to measure WSS and recommendations regarding the measurement of WSS are provided.

On the electric field model for an open magnetosphere

NASA Technical Reports Server (NTRS)

Wang, Zhi; Ashour-Abdalla, Maha; Walker, Raymond J.

1993-01-01

We have developed a new canonical separator line type magnetospheric magnetic field and electric field model for use in magnetospheric calculations, we determine the magnetic and electric field by controlling the reconnection rate at the subsolar magnetopause. The model is applicable only for purely southward interplanetary magnetic field (IMF). We have obtained a more realistic magnetotail configuration by applying a stretch transformation to an axially symmetric field solution. We also discuss the Stern singularity in which there is an electric field singlarity in the canonical separate line models for B(sub y) not = to 0 by using a new technique that solves for the electric field along a field line directly instead of determining it by a potential mapping. The singularity not only causes an infinite electric field on the polar cap, but also causes the boundary conditions at plus infinity and minus infinity in the solar wind to contradict each other. This means that the canonical separator line models do not represent the open magnetosphere well, except for the case of purely southward IMF.

First Data Release of the ESO-ARO Public Survey SAMPLING—SMT “All-sky” Mapping of Planck Interstellar Nebulae in the Galaxy

NASA Astrophysics Data System (ADS)

Wang, Ke; Zahorecz, Sarolta; Cunningham, Maria R.; Tóth, L. Viktor; Liu, Tie; Lu, Xing; Wang, Yuan; Cosentino, Giuliana; Sung, Ren-Shiang; Sokolov, Vlas; Wang, Shen; Wang, Yuwei; Zhang, Zhiyu; Li, Di; Kim, Kee-Tae; Tatematsu, Ken’ichi; Testi, Leonardo; Wu, Yuefang; Yang, Ji; SAMPLING Collaboration

2018-01-01

We make the first data release (DR1) of the ongoing ESO Public Survey SAMPLING (http://dx.doi.org/10.7910/DVN/0L8NHX). DR1 comprises of 124 fields distributed in $70^\\circ < l < 216^\\circ$, $-35^\\circ < b < 25^\\circ$. The 12CO and 13CO (2-1) cubes are gridded in $8"$ pixels, with an effective resolution of $36"$. The channel width is 0.33 km/s and the RMS noise is $T_{\\rm mb}<0.2$ K. Once completed, SAMPLING and complementary surveys will initiate the first major step forward to characterize molecular clouds and star formation on truly Galactic scales.

Using patient data similarities to predict radiation pneumonitis via a self-organizing map

NASA Astrophysics Data System (ADS)

Chen, Shifeng; Zhou, Sumin; Yin, Fang-Fang; Marks, Lawrence B.; Das, Shiva K.

2008-01-01

This work investigates the use of the self-organizing map (SOM) technique for predicting lung radiation pneumonitis (RP) risk. SOM is an effective method for projecting and visualizing high-dimensional data in a low-dimensional space (map). By projecting patients with similar data (dose and non-dose factors) onto the same region of the map, commonalities in their outcomes can be visualized and categorized. Once built, the SOM may be used to predict pneumonitis risk by identifying the region of the map that is most similar to a patient's characteristics. Two SOM models were developed from a database of 219 lung cancer patients treated with radiation therapy (34 clinically diagnosed with Grade 2+ pneumonitis). The models were: SOMall built from all dose and non-dose factors and, for comparison, SOMdose built from dose factors alone. Both models were tested using ten-fold cross validation and Receiver Operating Characteristics (ROC) analysis. Models SOMall and SOMdose yielded ten-fold cross-validated ROC areas of 0.73 (sensitivity/specificity = 71%/68%) and 0.67 (sensitivity/specificity = 63%/66%), respectively. The significant difference between the cross-validated ROC areas of these two models (p < 0.05) implies that non-dose features add important information toward predicting RP risk. Among the input features selected by model SOMall, the two with highest impact for increasing RP risk were: (a) higher mean lung dose and (b) chemotherapy prior to radiation therapy. The SOM model developed here may not be extrapolated to treatment techniques outside that used in our database, such as several-field lung intensity modulated radiation therapy or gated radiation therapy.

A symplectic map for trajectories of magnetic field lines in double-null divertor tokamaks

NASA Astrophysics Data System (ADS)

Crank, Willie; Ali, Halima; Punjabi, Alkesh

2009-11-01

The coordinates of the area-preserving map equations for integration of magnetic field line trajectories in tokamaks can be any coordinates for which a transformation to (ψ,θ,φ) coordinates exists [A. Punjabi, H. Ali, T. Evans, and A. Boozer, Phys. Lett. A 364, 140 (2007)]. ψ is toroidal magnetic flux, θ is poloidal angle, and φ is toroidal angle. This freedom is exploited to construct a map that represents the magnetic topology of double-null divertor tokamaks. For this purpose, the generating function of the simple map [A. Punjabi, A. Verma, and A. Boozer, Phys. Rev. Lett. 69, 3322 (1992)] is slightly modified. The resulting map equations for the double-null divertor tokamaks are: x1=x0-ky0(1-y0^2 ), y1=y0+kx1. k is the map parameter. It represents the generic topological effects of toroidal asymmetries. The O-point is at (0.0). The X-points are at (0,±1). The equilibrium magnetic surfaces are calculated. These surfaces are symmetric about the x- and y- axes. The widths of stochastic layer near the X-points in the principal plane, and the fractal dimensions of the magnetic footprints on the inboard and outboard side of upper and lower X-points are calculated from the map. This work is supported by US Department of Energy grants DE-FG02-07ER54937, DE-FG02-01ER54624 and DE-FG02-04ER54793.

Mapped plant macrofossil and pollen records of late Quaternary vegetation change in eastern North America

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jackson, S.T.; Overpeck, J.T.; Webb, T. III

We compiled a plant macrofossil database for 12 eastern North American tree and shrub taxa (Picea sp., P. glauca, P. mariana, Larix laricina, Abies balsamea, Tsuga canadensis, Pinus strobus, P. banksiana, P. resinosa, Betula papyrifera, B. alleghaniensis, B. Series Humiles) at 264 late Quaternary sites. Presence/absence maps for these taxa at 18,000, 15,000, 12,000, 9000, 6000, 3000, and 0 {sup 14}C yr B.P. show changes in geographic ranges of these species in response to climatic change. Comparison of the macrofossil maps with isopoll maps for corresponding taxa corroborates inferences from the pollen data, and reveals species-level patterns not apparent inmore » the pollen maps.« less

Genome-wide association mapping of resistance to eyespot disease (Pseudocercosporella herpotrichoides) in European winter wheat (Triticum aestivum L.) and fine-mapping of Pch1.

PubMed

Zanke, Christine D; Rodemann, Bernd; Ling, Jie; Muqaddasi, Quddoos H; Plieske, Jörg; Polley, Andreas; Kollers, Sonja; Ebmeyer, Erhard; Korzun, Viktor; Argillier, Odile; Stiewe, Gunther; Zschäckel, Thomas; Ganal, Martin W; Röder, Marion S

2017-03-01

Genotypes with recombination events in the Triticum ventricosum introgression on chromosome 7D allowed to fine-map resistance gene Pch1, the main source of eyespot resistance in European winter wheat cultivars. Eyespot (also called Strawbreaker) is a common and serious fungal disease of winter wheat caused by the necrotrophic fungi Oculimacula yallundae and Oculimacula acuformis (former name Pseudocercosporella herpotrichoides). A genome-wide association study (GWAS) for eyespot was performed with 732 microsatellite markers (SSR) and 7761 mapped SNP markers derived from the 90 K iSELECT wheat array using a panel of 168 European winter wheat varieties as well as three spring wheat varieties and phenotypic evaluation of eyespot in field tests in three environments. Best linear unbiased estimations (BLUEs) were calculated across all trials and ranged from 1.20 (most resistant) to 5.73 (most susceptible) with an average value of 4.24 and a heritability of H 2  = 0.91. A total of 108 SSR and 235 SNP marker-trait associations (MTAs) were identified by considering associations with a -log 10 (P value) ≥3.0. Significant MTAs for eyespot-score BLUEs were found on chromosomes 1D, 2A, 2D, 3D, 5A, 5D, 6A, 7A and 7D for the SSR markers and chromosomes 1B, 2A, 2B, 2D, 3B and 7D for the SNP markers. For 18 varieties (10.5%), a highly resistant phenotype was detected that was linked to the presence of the resistance gene Pch1 on chromosome 7D. The identification of genotypes with recombination events in the introgressed genomic segment from Triticum ventricosum harboring the Pch1 resistance gene on chromosome 7DL allowed the fine-mapping of this gene using additional SNP markers and a potential candidate gene Traes_7DL_973A33763 coding for a CC-NBS-LRR class protein was identified.

Topologically massive gravity and the AdS/CFT correspondence

NASA Astrophysics Data System (ADS)

Skenderis, Kostas; Taylor, Marika; van Rees, Balt C.

2009-09-01

We set up the AdS/CFT correspondence for topologically massive gravity (TMG) in three dimensions. The first step in this procedure is to determine the appropriate fall off conditions at infinity. These cannot be fixed a priori as they depend on the bulk theory under consideration and are derived by solving asymptotically the non-linear field equations. We discuss in detail the asymptotic structure of the field equations for TMG, showing that it contains leading and subleading logarithms, determine the map between bulk fields and CFT operators, obtain the appropriate counterterms needed for holographic renormalization and compute holographically one- and two-point functions at and away from the ``chiral point'' (μ = 1). The 2-point functions at the chiral point are those of a logarithmic CFT (LCFT) with cL = 0,cR = 3l/GN and b = -3l/GN, where b is a parameter characterizing different c = 0 LCFTs. The bulk correlators away from the chiral point (μ ≠ 1) smoothly limit to the LCFT ones as μ → 1. Away from the chiral point, the CFT contains a state of negative norm and the expectation value of the energy momentum tensor in that state is also negative, reflecting a corresponding bulk instability due to negative energy modes.

AN ORDERED MAGNETIC FIELD IN THE PROTOPLANETARY DISK OF AB Aur REVEALED BY MID-INFRARED POLARIMETRY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Dan; Pantin, Eric; Telesco, Charles M.

2016-11-20

Magnetic fields ( B -fields) play a key role in the formation and evolution of protoplanetary disks, but their properties are poorly understood due to the lack of observational constraints. Using CanariCam at the 10.4 m Gran Telescopio Canarias, we have mapped out the mid-infrared polarization of the protoplanetary disk around the Herbig Ae star AB Aur. We detect ∼0.44% polarization at 10.3 μ m from AB Aur's inner disk ( r  < 80 au), rising to ∼1.4% at larger radii. Our simulations imply that the mid-infrared polarization of the inner disk arises from dichroic emission of elongated particles aligned inmore » a disk B -field. The field is well ordered on a spatial scale, commensurate with our resolution (∼50 au), and we infer a poloidal shape tilted from the rotational axis of the disk. The disk of AB Aur is optically thick at 10.3 μ m, so polarimetry at this wavelength is probing the B -field near the disk surface. Our observations therefore confirm that this layer, favored by some theoretical studies for developing magneto-rotational instability and its resultant viscosity, is indeed very likely to be magnetized. At radii beyond ∼80 au, the mid-infrared polarization results primarily from scattering by dust grains with sizes up to ∼1 μ m, a size indicating both grain growth and, probably, turbulent lofting of the particles from the disk mid-plane.« less

Improving soft FEC performance for higher-order modulations via optimized bit channel mappings.

PubMed

Häger, Christian; Amat, Alexandre Graell I; Brännström, Fredrik; Alvarado, Alex; Agrell, Erik

2014-06-16

Soft forward error correction with higher-order modulations is often implemented in practice via the pragmatic bit-interleaved coded modulation paradigm, where a single binary code is mapped to a nonbinary modulation. In this paper, we study the optimization of the mapping of the coded bits to the modulation bits for a polarization-multiplexed fiber-optical system without optical inline dispersion compensation. Our focus is on protograph-based low-density parity-check (LDPC) codes which allow for an efficient hardware implementation, suitable for high-speed optical communications. The optimization is applied to the AR4JA protograph family, and further extended to protograph-based spatially coupled LDPC codes assuming a windowed decoder. Full field simulations via the split-step Fourier method are used to verify the analysis. The results show performance gains of up to 0.25 dB, which translate into a possible extension of the transmission reach by roughly up to 8%, without significantly increasing the system complexity.

Molecular jet of IRAS 04166+2706

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Liang-Yao; Shang, Hsien; Su, Yu-Nung

2014-01-01

The molecular outflow from IRAS 04166+2706 was mapped with the Submillimeter Array at a 350 GHz continuum and CO J = 3-2 at an angular resolution of ∼1''. The field of view covers the central arcminute, which contains the inner four pairs of knots of the molecular jet. On the channel map, conical structures are clearly present in the low-velocity range (|V – V {sub 0}| < 10 km s{sup –1}), and the highly collimated knots appear in the extremely high velocity range (50 >|V – V {sub 0}| > 30 km s{sup –1}). The higher angular resolution of ∼1''more » reveals the first blue-shifted knot (B1) that was missing in previous Plateau de Bure Interferometer observation of Santiago-García et al. at an offset of ∼6'' to the northeast of the central source. This identification completes the symmetric sequence of knots in both the blue- and red-shifted lobes of the outflow. The innermost knots R1 and B1 have the highest velocities within the sequence. Although the general features appear to be similar to previous CO J = 2-1 images in Santiago-García et al., the emission in CO J = 3-2 almost always peaks further away from the central source than that of CO J = 2-1 in the red-shifted lobe of the channel maps. This gives rise to a gradient in the line-ratio map of CO J = 3-2/J = 2-1 from head to tail within a knot. A large velocity gradient analysis suggests that the differences may reflect a higher gas kinetic temperature at the head. We also explore possible constraints imposed by the nondetection of SiO J = 8-7.« less

Design of parallel transmission radiofrequency pulses robust against respiration in cardiac MRI at 7 Tesla.

PubMed

Schmitter, Sebastian; Wu, Xiaoping; Uğurbil, Kâmil; Van de Moortele, Pierre-François

2015-11-01

Two-spoke parallel transmission (pTX) radiofrequency (RF) pulses have been demonstrated in cardiac MRI at 7T. However, current pulse designs rely on a single set of B1(+)/B0 maps that may not be valid for subsequent scans acquired at another phase of the respiration cycle because of organ displacement. Such mismatches may yield severe excitation profile degradation. B1(+)/B0 maps were obtained, using 16 transmit channels at 7T, at three breath-hold positions: exhale, half-inhale, and inhale. Standard and robust RF pulses were designed using maps obtained at exhale only, and at multiple respiratory positions, respectively. Excitation patterns were analyzed for all positions using Bloch simulations. Flip-angle homogeneity was compared in vivo in cardiac CINE acquisitions. Standard one- and two-spoke pTX RF pulses are sensitive to breath-hold position, primarily due to B1(+) alterations, with high dependency on excitation trajectory for two spokes. In vivo excitation inhomogeneity varied from nRMSE = 8.2% (exhale) up to 32.5% (inhale) with the standard design; much more stable results were obtained with the robust design with nRMSE = 9.1% (exhale) and 10.6% (inhale). A new pTX RF pulse design robust against respiration induced variations of B1(+)/B0 maps is demonstrated and is expected to have a positive impact on cardiac MRI in breath-hold, free-breathing, and real-time acquisitions. © 2014 Wiley Periodicals, Inc.

Lithological mapping of Kanjamalai hill using hyperspectral remote sensing tools in Salem district, Tamil Nadu, India

NASA Astrophysics Data System (ADS)

Arulbalaji, Palanisamy; Balasubramanian, Gurugnanam

2017-07-01

This study uses advanced spaceborne thermal emission and reflection radiometer (ASTER) hyperspectral remote sensing techniques to discriminate rock types composing Kanjamalai hill located in the Salem district of Tamil Nadu, India. Kanjamalai hill is of particular interest because it contains economically viable iron ore deposits. ASTER hyperspectral data were subjected to principal component analysis (PCA), independent component analysis (ICA), and minimum noise fraction (MNF) to improve identification of lithologies remotely and to compare these digital data results with published geologic maps. Hyperspectral remote sensing analysis indicates that PCA (R∶G∶B=2∶1∶3), MNF (R∶G∶B=3∶2∶1), and ICA (R∶G∶B=1∶3∶2) provide the best band combination for effective discrimination of lithological rock types composing Kanjamalai hill. The remote sensing-derived lithological map compares favorably with a published geological map from Geological Survey of India and has been verified with ground truth field investigations. Therefore, ASTER data-based lithological mapping provides fast, cost-effective, and accurate geologic data useful for lithological discrimination and identification of ore deposits.

Nucleotide sequences of Herpes Simplex Virus type 1 (HSV-1) affecting virus entry, cell fusion, and production of glycoprotein gB (VP7)

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeLuca, N.; Bzik, D.J.; Bond, V.C.

1982-10-30

The tsB5 strain of Herpes Simplex Virus type 1 (HSV-1) contains at least two mutations; one mutation specifies the syncytial phenotype and the other confers temperature sensitivity for virus growth. These functions are known to be located between the prototypic map coordinates 0.30 and 0.42. In this study it was demonstrated that tsB5 enters human embryonic lung (HEL) cells more rapidly than KOS, another strain of HSV-1. The EcoRI restriction fragment F from the KOS strain (map coordinates 0.315 to 0.421) was mapped with eight restriction endonucleases, and 16 recombinant plasmids were constructed which contained varying portions of the KOSmore » genome. Recombinant viruses were generated by marker-rescue and marker-transfer cotransfection procedures, using intact DNA from one strain and a recombinant plasmid containing DNA from the other strain. The region of the crossover between the two nonisogenic strains was inferred by the identification of restriction sites in the recombinants that were characteristic of the parental strains. The recombinants were subjected to phenotypic analysis. Syncytium formation, rate of virus entry, and the production of gB were all separable by the crossovers that produced the recombinants. The KOS sequences which rescue the syncytial phenotype of tsB5 were localized to 1.5 kb (map coordinates 0.345 to 0.355), and the temperature-sensitive mutation was localized to 1.2 kb (0.360 to 0.368), giving an average separation between the mutations of 2.5 kb on the 150-kb genome. DNA sequences that specify a functional domain for virus entry were localized to the nucleotide sequences between the two mutations. All three functions could be encoded by the virus gene specifying the gB glycoprotein.« less

Brain tumor segmentation from multimodal magnetic resonance images via sparse representation.

PubMed

Li, Yuhong; Jia, Fucang; Qin, Jing

2016-10-01

Accurately segmenting and quantifying brain gliomas from magnetic resonance (MR) images remains a challenging task because of the large spatial and structural variability among brain tumors. To develop a fully automatic and accurate brain tumor segmentation algorithm, we present a probabilistic model of multimodal MR brain tumor segmentation. This model combines sparse representation and the Markov random field (MRF) to solve the spatial and structural variability problem. We formulate the tumor segmentation problem as a multi-classification task by labeling each voxel as the maximum posterior probability. We estimate the maximum a posteriori (MAP) probability by introducing the sparse representation into a likelihood probability and a MRF into the prior probability. Considering the MAP as an NP-hard problem, we convert the maximum posterior probability estimation into a minimum energy optimization problem and employ graph cuts to find the solution to the MAP estimation. Our method is evaluated using the Brain Tumor Segmentation Challenge 2013 database (BRATS 2013) and obtained Dice coefficient metric values of 0.85, 0.75, and 0.69 on the high-grade Challenge data set, 0.73, 0.56, and 0.54 on the high-grade Challenge LeaderBoard data set, and 0.84, 0.54, and 0.57 on the low-grade Challenge data set for the complete, core, and enhancing regions. The experimental results show that the proposed algorithm is valid and ranks 2nd compared with the state-of-the-art tumor segmentation algorithms in the MICCAI BRATS 2013 challenge. Copyright © 2016 Elsevier B.V. All rights reserved.

Analysis of chaos attractors of MCG-recordings.

PubMed

Jiang, Shiqin; Yang, Fan; Yi, Panke; Chen, Bo; Luo, Ming; Wang, Lemin

2006-01-01

By studying the chaos attractor of cardiac magnetic induction strength B(z) generated by the electrical activity of the heart, we found that its projection in the reconstructed phase space has a similar shape with the map of the total current dipole vector. It is worth noting that the map of the total current dipole vector is computed with MCG recordings measured at 36 locations, whereas the chaos attractor of B(z) is generated by only one cardiac magnetic field recordings on the measured plan. We discuss only two subjects of different ages in this paper.

Improvements in Diagnostic Accuracy with Quantitative Dynamic Contrast-Enhanced MRI

DTIC Science & Technology

2014-03-01

values   With the fat B1 map it is now possible to obtain a B1 map for the whole field of view. To do this we have been testing software to...10.1002/ mrm .21120. 7. Nehrke K. On the steady-state properties of actual flip angle imaging (AFI). Magn. Reson. Med. 2009;61:84–92. doi: 10.1002/ mrm ...by bilateral dynamic contrast‐enhanced MRI: A sensitivity and specificity study. Magn. … 2008;59:747–54. doi: 10.1002/ mrm .21530. 11. Hylton N

WE-G-BRD-01: A Data-Driven 4D-MRI Motion Model to Estimate Full Field-Of-View Abdominal Motion From 2D Image Navigators During MR-Linac Treatment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stemkens, B; Tijssen, RHN; Denis de Senneville, B Denis

2015-06-15

Purpose: To estimate full field-of-view abdominal respiratory motion from fast 2D image navigators using a 4D-MRI based motion model. This will allow for radiation dose accumulation mapping during MR-Linac treatment. Methods: Experiments were conducted on a Philips Ingenia 1.5T MRI. First, a retrospectively ordered 4D-MRI was constructed using 3D transient-bSSFP with radial in-plane sampling. Motion fields were calculated through 3D non-rigid registration. From these motion fields a PCA-based abdominal motion model was constructed and used to warp a 3D reference volume to fast 2D cine-MR image navigators that can be used for real-time tracking. To test this procedure, a time-seriesmore » consisting of two interleaved orthogonal slices (sagittal and coronal), positioned on the pancreas or kidneys, were acquired for 1m38s (dynamic scan-time=0.196ms), during normal, shallow, or deep breathing. The coronal slices were used to update the optimal weights for the first two PCA components, in order to warp the 3D reference image and construct a dynamic 4D-MRI time-series. The interleaved sagittal slices served as an independent measure to test the model’s accuracy and fit. Spatial maps of the root-mean-squared error (RMSE) and histograms of the motion differences within the pancreas and kidneys were used to evaluate the method. Results: Cranio-caudal motion was accurately calculated within the pancreas using the model for normal and shallow breathing with an RMSE of 1.6mm and 1.5mm and a histogram median and standard deviation below 0.2 and 1.7mm, respectively. For deep-breathing an underestimation of the inhale amplitude was observed (RMSE=4.1mm). Respiratory-induced antero-posterior and lateral motion were correctly mapped (RMSE=0.6/0.5mm). Kidney motion demonstrated good motion estimation with RMSE-values of 0.95 and 2.4mm for the right and left kidney, respectively. Conclusion: We have demonstrated a method that can calculate dynamic 3D abdominal motion in a large volume, while acquiring real-time cine-MR images for MR-guided radiotherapy.« less

Magnetometric mapping of superconducting RF cavities

NASA Astrophysics Data System (ADS)

Schmitz, B.; Köszegi, J.; Alomari, K.; Kugeler, O.; Knobloch, J.

2018-05-01

A scalable mapping system for superconducting RF (SRF) cavities is presented. Currently, it combines local temperature measurement with 3D magnetic field mapping along the outer surface of the resonator. This allows for the observation of dynamic effects that have an impact on the superconducting properties of a cavity, such as the normal to superconducting phase transition or a quench. The system was developed for a single cell 1.3 GHz TESLA-type cavity, but can be easily adopted to arbitrary other cavity types. A data acquisition rate of 500 Hz for all channels simultaneously (i.e., 2 ms acquisition time for a complete map) and a magnetic field resolution of currently up to 14 mA/m/μ0 = 17 nT have been implemented. While temperature mapping is a well known technique in SRF research, the integration of magnetic field mapping opens the possibility of detailed studies of trapped magnetic flux and its impact on the surface resistance. It is shown that magnetic field sensors based on the anisotropic magnetoresistance effect can be used in the cryogenic environment with improved sensitivity compared to room temperature. Furthermore, examples of first successful combined temperature and magnetic-field maps are presented.

Kinematic Sunyaev-Zel'dovich Effect with Projected Fields: A Novel Probe of the Baryon Distribution with Planck, WMAP, and WISE Data.

PubMed

Hill, J Colin; Ferraro, Simone; Battaglia, Nick; Liu, Jia; Spergel, David N

2016-07-29

The kinematic Sunyaev-Zel'dovich (KSZ) effect-the Doppler boosting of cosmic microwave background (CMB) photons due to Compton scattering off free electrons with nonzero bulk velocity-probes the abundance and the distribution of baryons in the Universe. All KSZ measurements to date have explicitly required spectroscopic redshifts. Here, we implement a novel estimator for the KSZ-large-scale structure cross-correlation based on projected fields: it does not require redshift estimates for individual objects, allowing KSZ measurements from large-scale imaging surveys. We apply this estimator to cleaned CMB temperature maps constructed from Planck and WMAP data and a galaxy sample from the Wide-field Infrared Survey Explorer (WISE). We measure the KSZ effect at 3.8σ-4.5σ significance, depending on the use of additional WISE galaxy bias constraints. We verify that our measurements are robust to possible dust emission from the WISE galaxies. Assuming the standard Λ cold dark matter cosmology, we directly constrain (f_{b}/0.158)(f_{free}/1.0)=1.48±0.19 (statistical error only) at redshift z≈0.4, where f_{b} is the fraction of matter in baryonic form and f_{free} is the free electron fraction. This is the tightest KSZ-derived constraint reported to date on these parameters. Astronomers have long known that baryons do not trace dark matter on ∼ kiloparsec scales and there has been strong evidence that galaxies are baryon poor. The consistency between the f_{b} value found here and the values inferred from analyses of the primordial CMB and big bang nucleosynthesis verifies that baryons approximately trace the dark matter distribution down to ∼ megaparsec scales. While our projected-field estimator is already competitive with other KSZ approaches when applied to current data sets (because we are able to use the full-sky WISE photometric survey), it will yield enormous signal-to-noise ratios when applied to upcoming high-resolution, multifrequency CMB surveys.

Interhemispheric Asymmetry of the Sunward Plasma Flows for Strongly Dominant IMF BZ > 0

NASA Astrophysics Data System (ADS)

Yakymenko, K. N.; Koustov, A. V.; Fiori, R. A. D.

2018-01-01

Super Dual Auroral Radar Network (SuperDARN) convection maps obtained simultaneously in both hemispheres are averaged to infer polar cap ionospheric flow patterns under strongly dominant positive interplanetary magnetic field (IMF) Bz component. The data set consisted of winter observations in the Northern Hemisphere simultaneously with summer observations in the Southern Hemisphere. Long-lasting high-latitude dayside reverse convection cells are shown to have faster sunward flows at near-magnetic noon hours in the summer/Southern Hemisphere. Sunward flows typically deviate from the midnight-noon meridian toward 10-11 h of magnetic local time in the summer/Southern Hemisphere and are more aligned with the midnight-noon meridian in the winter/Northern Hemisphere. Flow deviations in the winter/Northern Hemisphere can be both toward prenoon and postnoon hours, and there is no clear relationship between flow deviation and the IMF By component. No strong preference for the sunward flow occurrence depending on the IMF Bx polarity was found. In addition, the rate of the sunward flow speed increase in response to an increase in driving conditions was found to be comparable for the IMF Bx > 0 and Bx < 0.

Integral field spectroscopy of local LCBGs: NGC 7673, a case study. Physical properties of star-forming regions

NASA Astrophysics Data System (ADS)

Castillo-Morales, A.; Gallego, J.; Pérez-Gallego, J.; Guzmán, R.; Muñoz-Mateos, J. C.; Zamorano, J.; Sánchez, S. F.

2011-03-01

Physical properties of the star-forming regions in the local Luminous Compact Blue Galaxy (LCBG) NGC 7673 are studied in detail using 3D spectroscopic data taken with the PMAS fibre pack (PPAK) integral field unit at the 3.5-m telescope in the Centro Astronómico Hispano Alemán (CAHA). We derive integrated and spatially resolved properties such as extinction, star formation rate (SFR) and metallicity for this galaxy. Our data show an extinction map with maximum values located at the position of the main clumps of star formation showing small spatial variations [E(B-V)t= 0.12-0.21 mag]. We derive an Hα-based SFR for this galaxy of 6.2 ± 0.8 M⊙ yr-1 in agreement with the SFR derived from infrared and radio continuum fluxes. The star formation is located mainly in clumps A, B, C and F. Different properties measured in clump B make this region peculiar. We find the highest Hα luminosity with an SFR surface density of 0.5 M⊙ yr-1 kpc-2 in this clump. In our previous work, the kinematic analysis for this galaxy shows an asymmetrical ionized gas velocity field with a kinematic decoupled component located at the position of clump B. This region shows the absence of strong absorption features and the presence of a Wolf-Rayet stellar population indicating that this is a young burst of massive stars. Furthermore, we estimate a gas metallicity of 12 + log(O/H) = 8.20 ± 0.15 (0.32 solar) for the integrated galaxy using the R23 index. The values derived for the different clumps with this method show small metallicity variations in this galaxy, with values in the range 8.12 (for clump A) to 8.23 (for clump B) for 12 + log(O/H). The analysis of the emission-line ratios discards the presence of any active galactic nuclei (AGN) activity or shocks as the ionization source in this galaxy. Between the possible mechanisms to explain the starburst activity in this galaxy, our 3D spectroscopic data support the scenario of an on-going interaction with the possibility for clump B to be the dwarf satellite galaxy.

Spatial and Global Sensory Suppression Mapping Encompassing the Central 10° Field in Anisometropic Amblyopia.

PubMed

Li, Jingjing; Li, Jinrong; Chen, Zidong; Liu, Jing; Yuan, Junpeng; Cai, Xiaoxiao; Deng, Daming; Yu, Minbin

2017-01-01

We investigate the efficacy of a novel dichoptic mapping paradigm in evaluating visual function of anisometropic amblyopes. Using standard clinical measures of visual function (visual acuity, stereo acuity, Bagolini lenses, and neutral density filters) and a novel quantitative mapping technique, 26 patients with anisometropic amblyopia (mean age = 19.15 ± 4.42 years) were assessed. Two additional psychophysical interocular suppression measurements were tested with dichoptic global motion coherence and binocular phase combination tasks. Luminance reduction was achieved by placing neutral density filters in front of the normal eye. Our study revealed that suppression changes across the central 10° visual field by mean luminance modulation in amblyopes as well as normal controls. Using simulation and an elimination of interocular suppression, we identified a novel method to effectively reflect the distribution of suppression in anisometropic amblyopia. Additionally, the new quantitative mapping technique was in good agreement with conventional clinical measures, such as interocular acuity difference (P < 0.001) and stereo acuity (P = 0.005). There was a good consistency between the results of interocular suppression with dichoptic mapping paradigm and the results of the other two psychophysical methods (suppression mapping versus binocular phase combination, P < 0.001; suppression mapping versus global motion coherence, P = 0.005). The dichoptic suppression mapping technique is an effective method to represent impaired visual function in patients with anisometropic amblyopia. It offers a potential in "micro-"antisuppression mapping tests and therapies for amblyopia.

Planck intermediate results: XXXVIII. E- and B-modes of dust polarization from the magnetized filamentary structure of the interstellar medium

DOE PAGES

Ade, P. A. R.; Aghanim, N.; Arnaud, M.; ...

2016-02-09

The quest for a B-mode imprint from primordial gravity waves on the polarization of the cosmic microwave background (CMB) requires the characterization of foreground polarization from Galactic dust. In this paper, we present a statistical study of the filamentary structure of the 353 GHz Planck Stokes maps at high Galactic latitude, relevant to the study of dust emission as a polarized foreground to the CMB. We filter the intensity and polarization maps to isolate filaments in the range of angular scales where the power asymmetry between E-modes and B-modes is observed. Using the Smoothed Hessian Major Axis Filament Finder (SMAFF),more » we identify 259 filaments at high Galactic latitude, with lengths larger or equal to 2° (corresponding to 3.5 pc in length for a typical distance of 100 pc). Thesefilaments show a preferred orientation parallel to the magnetic field projected onto the plane of the sky, derived from their polarization angles. We present mean maps of the filaments in Stokes I, Q, U, E, and B, computed by stacking individual images rotated to align the orientations of the filaments. Combining the stacked images and the histogram of relative orientations, we estimate the mean polarization fraction of the filaments to be 11%. Furthermore, we show that the correlation between the filaments and the magnetic field orientations may account for the E and B asymmetry and the C ℓ TE/C ℓ EE ratio, reported in the power spectra analysis of the Planck353 GHz polarization maps. Finally, future models of the dust foreground for CMB polarization studies will need to take into account the observed correlation between the dust polarization and the structure of interstellar matter.« less

VizieR Online Data Catalog: New planetary nebulae in LMC (Reid+, 2006)

NASA Astrophysics Data System (ADS)

Reid, W. A.; Parker, Q. A.

2006-05-01

Over the last few years, we have specially constructed additional deep, homogeneous, narrow-band H and matching broad-band 'SR' (Short Red) maps of the entire central 25deg2 of the LMC. These unique maps were obtained from co-adding 12 well-matched UKST 2-h Hα exposures and six 15-min equivalent SR-band exposures on the same field using high-resolution Tech-Pan film. The 'SuperCOSMOS' plate-measuring machine at the Royal Observatory Edinburgh (Hambly et al., 2001MNRAS.326.1279) has scanned, co-added and pixel-matched these exposures, creating 10-m (0.67-arcsec) pixel data which goes 1.35 and 1mag deeper than individual exposures, achieving the full canonical Poissonian depth gain, e.g. Bland-Hawthorn, Shopbell & Malin (1993AJ....106.2154B). This gives a depth ~21.5 for the SR images and Requiv~22 for Hα (4.5x10-17erg/cm2/s/{AA}) which is at least 1-mag deeper than the best wide-field narrow-band LMC images currently available. (2 data files).

Diffusion-weighted magnetic resonance imaging using different b-value combinations for the evaluation of treatment results after volumetric MR-guided high-intensity focused ultrasound ablation of uterine fibroids.

PubMed

Ikink, Marlijne E; Voogt, Marianne J; van den Bosch, Maurice A A J; Nijenhuis, Robbert J; Keserci, Bilgin; Kim, Young-sun; Vincken, Koen L; Bartels, Lambertus W

2014-09-01

To assess the value of diffusion-weighted magnetic resonance imaging (DWI) and apparent diffusion coefficient (ADC) mapping using different b-value combinations for treatment evaluation after magnetic resonance-guided high-intensity focused ultrasound (MR-HIFU) of uterine fibroids. Fifty-six patients with 67 uterine fibroids were treated with volumetric MR-HIFU. Pre-treatment and post-treatment images were obtained using contrast-enhanced T1-weighted MRI (CE-T1WI) and DWI using b = 0, 200, 400, 600, 800 s/mm(2). ADC maps were generated using subsets of b-values to investigate the effects of tissue ablation on water diffusion and perfusion in fibroids treated with MR-HIFU. Four combinations of b-values were used: (1) all b-values; (2) b = 0, 200 s/mm(2); (3) b = 400, 600, 800 s/mm(2); and (4) b = 0, 800 s/mm(2). Using the lowest b-values (0 and 200 s/mm(2)), the mean ADC value in the ablated tissue reduced significantly (p < 0.001) compared with baseline. Calculating the ADC value with the highest b-values (400, 600, 800 s/mm(2)), the ADC increased significantly (p < 0.001) post-treatment. ADC maps calculated with the lowest b-values resulted in the best visual agreement of non-perfused fibroid tissue detected on CE images. Other b-value combinations and normal myometrium showed no difference in ADC after MR-HIFU treatment. A decrease in contrast agent uptake within the ablated region on CE-T1WI was correlated to a significantly decreased ADC when b = 0 and 200 s/mm(2) were used. DWI could be useful for treatment evaluation after MR-HIFU of uterine fibroids. The ADC in fibroid tissue is influenced by the choice of b- values. Low b-values seem the best choice to emphasise perfusion effects after MR-HIFU.

Spatial selectivity and binaural responses in the inferior colliculus of the great horned owl.

PubMed

Volman, S F; Konishi, M

1989-09-01

In this study we have investigated the processing of auditory cues for sound localization in the great horned owl (Bubo virginianus). Previous studies have shown that the barn owl, whose ears are asymmetrically oriented in the vertical plane, has a 2-dimensional, topographic representation of auditory space in the external division of the inferior colliculus (ICx). As in the barn owl, the great horned owl's ICx is anatomically distinct and projects to the optic tectum. Neurons in ICx respond over only a small range of azimuths (mean = 32 degrees), and azimuth is topographically mapped. In contrast to the barn owl, the great horned owl has bilaterally symmetrical ears and its receptive fields are not restricted in elevation. The binaural cues available for sound localization were measured both with cochlear microphonic recordings and with a microphone attached to a probe tube in the auditory canal. Interaural time disparity (ITD) varied monotonically with azimuth. Interaural intensity differences (IID) also changed with azimuth, but the largest IIDs were less than 15 dB, and the variation was not monotonic. Neither ITD nor IID varied systematically with changes in the vertical position of a sound source. We used dichotic stimulation to determine the sensitivity of ICx neurons to these binaural cues. Best ITD of ICx units was topographically mapped and strongly correlated with receptive-field azimuth. The width of ITD tuning curves, measured at 50% of the maximum response, averaged 72 microseconds. All ICx neurons responded only to binaural stimulation and had nonmonotonic IID tuning curves. Best IID was weakly, but significantly, correlated with best ITD (r = 0.39, p less than 0.05). The IID tuning curves, however, were broad (mean 50% width = 24 dB), and 67% of the units had best IIDs within 5 dB of 0 dB IID. ITD tuning was sensitive to variations in IID in the direction opposite to that expected for time-intensity trading, but the magnitude of this effect was only 1.5 microseconds/dB IID. We conclude that, in the great horned owl, the spatial selectivity of ICx neurons arises primarily from their ITD tuning. Except for the absence of elevation selectivity and the narrow range of best IIDs, ICx in the great horned owl appears to be organized much the same as in the barn owl.

Hot deformation behaviors and processing maps of B{sub 4}C/Al6061 neutron absorber composites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Yu-Li

In this study, the hot deformation behaviors of 30 wt.% B{sub 4}C/Al6061 neutron absorber composites (NACs) have been investigated by conducting isothermal compression tests at temperatures ranging from 653 K to 803 K and strain rates from 0.01 to 10 s{sup −1}. It was found that, during hot compression, the B{sub 4}C/Al6061 NACs exhibited a steady flow characteristic which can be expressed by the Zener-Hollomon parameter as a hyperbolic-sine function of flow stress. High average activation energy (185.62 kJ/mol) of B{sub 4}C/Al6061 NACs is noted in current study owing to the high content of B{sub 4}C particle. The optimum hotmore » working conditions for B{sub 4}C/Al6061 NACs are found to be 760–803 K/0.01–0.05 s{sup −1} based on processing map and microstructure evolution. Typical material instabilities are thought to be attributed to void formation, adiabatic shear bands (ASB), particle debonding, and matrix cracking. Finally, the effect of the plastic deformation zones (PDZs) on the microstructure evolution in this 30 wt.% B{sub 4}C/Al6061 composite is found to be very important. - Highlights: •The hot deformation behavior of the 30 wt.% B{sub 4}C/Al6061 NACs was first analyzed. •The 3D efficiency map and the instability map are developed. •The optimum hot working conditions were identified and validated by SEM and TEM. •The hot deformation schematic diagram of 30 wt.% B{sub 4}C/Al6061 NACs is developed.« less

Geologic map and structure sections of the Clear Lake Volcanics, Northern California

USGS Publications Warehouse

Hearn, B.C.; Donnelly-Nolan, J. M.; Goff, F.E.

1995-01-01

The Clear Lake Volcanics are located in the California Coast Ranges about 150 km north of San Francisco. This Quaternary volcanic field has erupted intermittently since 2.1 million years ago. This volcanic field is considered a high-threat volcanic system (Ewert and others, 2005) The adjacent Geysers geothermal field, largest power-producing geothermal field in the world, is powered by the magmatic heat source for the volcanic field. This report consists of three sheets that include the geologic map, one table, two figures, three cross sections, description of map units, charts of standard and diagrammatic correlation of map units, and references. This map supersedes U.S. Geological Survey Open-File Report 76-751. Descriptions of map units are grouped by geographic area. Summaries of the evolution, chemistry, structure, and tectonic setting of the Clear Lake Volcanics are given in Hearn and others (1981) and Donnelly-Nolan and others (1981). The geology of parts of the area underlain by the Cache Formation is based on mapping by Rymer (1981); the geology of parts of the areas underlain by the Sonoma Volcanics, Franciscan assemblage, and Great Valley sequence is based on mapping by McLaughlin (1978). Volcanic compositional map units are basalt, basaltic andesite, andesite, dacite, rhyodacite, and rhyolite, based on SiO2 content. Included in this report are maps showing the distribution of volcanic rocks through time and a chart showing erupted volumes of different lava types through time. A table gives petrographic data for each map unit by mineral type, abundance, and size. Most ages are potassium-argon (K/Ar) ages determined for whole-rock samples and mineral separates by Donnelly-Nolan and others (1981), unless otherwise noted. A few ages are carbon-14 ages or were estimated from geologic relationships. Magnetic polarities are from Mankinen and others (1978; 1981) or were determined in the field by B.C. Hearn, Jr., using a portable fluxgate magnetometer. Thickness for most units is estimated from topographic relief except where drill-hole data were available.

Longitudinal stability of MRI for mapping brain change using tensor-based morphometry.

PubMed

Leow, Alex D; Klunder, Andrea D; Jack, Clifford R; Toga, Arthur W; Dale, Anders M; Bernstein, Matt A; Britson, Paula J; Gunter, Jeffrey L; Ward, Chadwick P; Whitwell, Jennifer L; Borowski, Bret J; Fleisher, Adam S; Fox, Nick C; Harvey, Danielle; Kornak, John; Schuff, Norbert; Studholme, Colin; Alexander, Gene E; Weiner, Michael W; Thompson, Paul M

2006-06-01

Measures of brain change can be computed from sequential MRI scans, providing valuable information on disease progression, e.g., for patient monitoring and drug trials. Tensor-based morphometry (TBM) creates maps of these brain changes, visualizing the 3D profile and rates of tissue growth or atrophy, but its sensitivity depends on the contrast and geometric stability of the images. As part of the Alzheimer's Disease Neuroimaging Initiative (ADNI), 17 normal elderly subjects were scanned twice (at a 2-week interval) with several 3D 1.5 T MRI pulse sequences: high and low flip angle SPGR/FLASH (from which Synthetic T1 images were generated), MP-RAGE, IR-SPGR (N = 10) and MEDIC (N = 7) scans. For each subject and scan type, a 3D deformation map aligned baseline and follow-up scans, computed with a nonlinear, inverse-consistent elastic registration algorithm. Voxelwise statistics, in ICBM stereotaxic space, visualized the profile of mean absolute change and its cross-subject variance; these maps were then compared using permutation testing. Image stability depended on: (1) the pulse sequence; (2) the transmit/receive coil type (birdcage versus phased array); (3) spatial distortion corrections (using MEDIC sequence information); (4) B1-field intensity inhomogeneity correction (using N3). SPGR/FLASH images acquired using a birdcage coil had least overall deviation. N3 correction reduced coil type and pulse sequence differences and improved scan reproducibility, except for Synthetic T1 images (which were intrinsically corrected for B1-inhomogeneity). No strong evidence favored B0 correction. Although SPGR/FLASH images showed least deviation here, pulse sequence selection for the ADNI project was based on multiple additional image analyses, to be reported elsewhere.

Longitudinal stability of MRI for mapping brain change using tensor-based morphometry

PubMed Central

Leow, Alex D.; Klunder, Andrea D.; Jack, Clifford R.; Toga, Arthur W.; Dale, Anders M.; Bernstein, Matt A.; Britson, Paula J.; Gunter, Jeffrey L.; Ward, Chadwick P.; Whitwell, Jennifer L.; Borowski, Bret J.; Fleisher, Adam S.; Fox, Nick C.; Harvey, Danielle; Kornak, John; Schuff, Norbert; Studholme, Colin; Alexander, Gene E.; Weiner, Michael W.; Thompson, Paul M.

2007-01-01

Measures of brain change can be computed from sequential MRI scans, providing valuable information on disease progression, e.g., for patient monitoring and drug trials. Tensor-based morphometry (TBM) creates maps of these brain changes, visualizing the 3D profile and rates of tissue growth or atrophy, but its sensitivity depends on the contrast and geometric stability of the images. A s part of the Alzheimer’s Disease Neuroimaging Initiative (ADNI), 17 normal elderly subjects were scanned twice (at a 2-week interval) with several 3D 1.5 T MRI pulse sequences: high and low flip angle SPGR/FLASH (from which Synthetic T1 images were generated), MP-RAGE, IR-SPGR (N = 10) and MEDIC (N = 7) scans. For each subject and scan type, a 3D deformation map aligned baseline and follow-up scans, computed with a nonlinear, inverse-consistent elastic registration algorithm. Voxelwise statistics, in ICBM stereotaxic space, visualized the profile of mean absolute change and its cross-subject variance; these maps were then compared using permutation testing. Image stability depended on: (1) the pulse sequence; (2) the transmit/receive coil type (birdcage versus phased array); (3) spatial distortion corrections (using MEDIC sequence information); (4) B1-field intensity inhomogeneity correction (using N3). SPGR/FLASH images acquired using a birdcage coil had least overall deviation. N3 correction reduced coil type and pulse sequence differences and improved scan reproducibility, except for Synthetic T1 images (which were intrinsically corrected for B1-inhomogeneity). No strong evidence favored B0 correction. Although SPGR/FLASH images showed least deviation here, pulse sequence selection for the ADNI project was based on multiple additional image analyses, to be reported elsewhere. PMID:16480900

Anisotropic magnetic particles in a magnetic field

PubMed Central

Martchenko, Ilya; Mihut, Adriana M.; Bialik, Erik; Hirt, Ann M.; Rufier, Chantal; Menzel, Andreas; Dietsch, Hervé; Linse, Per

2016-01-01

We characterize the structural properties of magnetic ellipsoidal hematite colloids with an aspect ratio ρ ≈ 2.3 using a combination of small-angle X-ray scattering and computer simulations. The evolution of the phase diagram with packing fraction φ and the strength of an applied magnetic field B is described, and the coupling between orientational order of magnetic ellipsoids and the bulk magnetic behavior of their suspension addressed. We establish quantitative structural criteria for the different phase and arrest transitions and map distinct isotropic, polarized non-nematic, and nematic phases over an extended range in the φ–B coordinates. We show that upon a rotational arrest of the ellipsoids around φ = 0.59, the bulk magnetic behavior of their suspension switches from superparamagnetic to ordered weakly ferromagnetic. If densely packed and arrested, these magnetic particles thus provide persisting remanent magnetization of the suspension. By exploring structural and magnetic properties together, we extend the often used colloid-atom analogy to the case of magnetic spins. PMID:27722439

The effect of addition of olive oil and "Aceto balsamico di Modena" wine vinegar in conjunction with active atmosphere packaging on the microbial and sensory quality of "Lollo Verde" lettuce and rocket salad.

PubMed

Arvanitoyannis, Ioannis S; Bouletis, Achilleas D; Papa, Eirini A; Gkagtzis, Dimitrios C; Hadjichristodoulou, Christos; Papaloucas, C

2011-12-01

Fresh rocket "Eruca Sativa" and lettuce "Lollo Verde" leaves were stored with the addition of olive oil and wine vinegar "Aceto balsamico di Modena" under modified atmosphere packaging (MAP) (5% O(2)/10% CO(2)/85% N(2) for MAP A and 2% O(2)/5% CO(2)/93% N(2) for MAP B). The microbial (mesophilic, psychrotrophic bacteria and Enterobacteriacae), physical (color and firmness) and sensory parameters of samples were studied in relation to storage time (up to 10 days at 5 ± 1 °C). The effect of wine vinegar and the application of both MAP treatments reduced the growth of all bacteria populations (p < 0.05). Samples with olive oil stored under MAP A gave the best score for overall impression (3 and 2.1 for MAP A and B respectively at the 9th day of storage) while the addition of vinegar limited sensory shelf-life to 3 days (p < 0.05). Firmness was negatively affected by wine vinegar while samples with olive oil stored under MAP A maintained firmness close to normal. Color attributes were maintained better under both MAP treatments (p < 0.05). Copyright © 2011 Elsevier Ltd. All rights reserved.

A novel allele of TaGW2-A1 is located in a finely mapped QTL that increases grain weight but decreases grain number in wheat (Triticum aestivum L.).

PubMed

Zhai, Huijie; Feng, Zhiyu; Du, Xiaofen; Song, Yane; Liu, Xinye; Qi, Zhongqi; Song, Long; Li, Jiang; Li, Linghong; Peng, Huiru; Hu, Zhaorong; Yao, Yingyin; Xin, Mingming; Xiao, Shihe; Sun, Qixin; Ni, Zhongfu

2018-03-01

A novel TaGW2-A1 allele was identified from a stable, robust QTL region, which is pleiotropic for thousand grain weight, grain number per spike, and grain morphometric parameters in wheat. Thousand grain weight (TGW) and grain number per spike (GNS) are two crucial determinants of wheat spike yield, and genetic dissection of their relationships can help to fine-tune these two components and maximize grain yield. By evaluating 191 recombinant inbred lines in 11 field trials, we identified five genomic regions on chromosomes 1B, 3A, 3B, 5B, or 7A that solely influenced either TGW or GNS, and a further region on chromosome 6A that concurrently affected TGW and GNS. The QTL of interest on chromosome 6A, which was flanked by wsnp_BE490604A_Ta_2_1 and wsnp_RFL_Contig1340_448996 and designated as QTgw/Gns.cau-6A, was finely mapped to a genetic interval shorter than 0.538 cM using near isogenic lines (NILs). The elite NILs of QTgw/Gns.cau-6A increased TGW by 8.33%, but decreased GNS by 3.05% in six field trials. Grain Weight 2 (TaGW2-A1), a well-characterized gene that negatively regulates TGW and grain width in wheat, was located within the finely mapped interval of QTgw/Gns.cau-6A. A novel and rare TaGW2-A1 allele with a 114-bp deletion in the 5' flanking region was identified in the parent with higher TGW, and it reduced TaGW2-A1 promoter activity and expression. In conclusion, these results expand our knowledge of the genetic and molecular basis of TGW-GNS trade-offs in wheat. The QTLs and the novel TaGW2-A1 allele are likely useful for the development of cultivars with higher TGW and/or higher GNS.

Antioxidant and immunoregulatory activity of alkali-extractable polysaccharides from mung bean.

PubMed

Yao, Yang; Zhu, Yingying; Ren, Guixing

2016-03-01

Alkali-extractable polysaccharides from the seeds of mung beans and two polysaccharide sub-fractions (MAP-1 and MAP-2) were isolated and purified by anion-exchange and gel filtration chromatography. The average molecular weights (Mws) of MAP-1 and MAP-2 were 94.2 kDa and 60.4 kDa, respectively. Monosaccharide component analysis indicated that MAP-1 was composed of Rha, Ara, Glu, Gal, and GalA in a molar ratio of 1.1:0.4:0.7:0.5:0.3. MAP-2 consisted of Xyl, Rha, Gal, Glu and GalA with a relative molar ratio of 0.4:1.4:1.6:0.5:0.2. Antioxidant assays indicated that both MAP-1 and MAP-2 exhibit significant antioxidant activity in a dose-dependent manner. An in vitro study further showed that MAP-1 and MAP-2 were both able to stimulate the production of secretory molecules (NO, TNF-α and IL-6) by RAW 264.7 murine macrophages in a concentration-dependent manner. These findings suggest that the polysaccharides isolated in our study have immunoregulatory effects on macrophages and can be used as a beneficial health food. Copyright © 2015. Published by Elsevier B.V.

A search for weak or complex magnetic fields in the B3V star ι Herculis

NASA Astrophysics Data System (ADS)

Wade, G. A.; Folsom, C. P.; Petit, P.; Petit, V.; Lignières, F.; Aurière, M.; Böhm, T.

2014-11-01

We obtained 128 high signal-to-noise ratio Stokes V spectra of the B3V star ι Her on five consecutive nights in 2012 with the ESPaDOnS spectropolarimeter at the Canada-France-Hawaii Telescope, with the aim of searching for the presence of weak and/or complex magnetic fields. Least-squares deconvolution (LSD) mean profiles were computed from individual spectra, averaged over individual nights and over the entire run. No Zeeman signatures are detected in any of the profiles. The longitudinal magnetic field in the grand average profile was measured to be -0.24 ± 0.32 G, as compared to -0.22 ± 0.32 G in the null profile. Our observations therefore provide no evidence for the presence of Zeeman signatures analogous to those observed in the A0V star Vega by Lignières et al. We interpret these observations in three ways. First, we compare the LSD profiles with synthetic Stokes V profiles corresponding to organized (dipolar) magnetic fields, for which we find an upper limit of about 8 G on the polar strength of any surface dipole present. Secondly, we compare the grand average profile with calculations corresponding to the random magnetic spot topologies of Kochukhov & Sudnik, inferring that spots, if present, of 2° radius with strengths of 2-4 G and a filling factor of 50 per cent should have been detected in our data. Finally, we compare the observations with synthetic V profiles corresponding to the surface magnetic maps of Vega (Petit et al.) computed for the spectral characteristics of ι Her. We conclude that while it is unlikely we would have detected a magnetic field identical to Vega's, we would have likely detected one with a peak strength of about 30 G, i.e. approximately four times as strong as that of Vega.

Physical map of the Brucella melitensis 16 M chromosome.

PubMed Central

Allardet-Servent, A; Carles-Nurit, M J; Bourg, G; Michaux, S; Ramuz, M

1991-01-01

We present the first restriction map of the Brucella melitensis 16 M chromosome obtained by Southern blot hybridization of SpeI, XhoI, and XbaI fragments separated by pulsed-field gel electrophoresis. All restriction fragments (a total of 113) were mapped into an open circle. The main difficulty in mapping involved the exceedingly high number of restriction fragments, as was expected considering the 59% G + C content of the Brucella genome. Several cloned genes were placed on this map, especially rRNA operons which are repeated three times. The size of the B. melitensis chromosome, estimated as 2,600 kb long in a previous study, appeared longer (3,130 kb) by restriction mapping. This restriction map is an initial approach to achieve a genetic map of the Brucella chromosome. Images PMID:2007548

Comparison of B0 versus B0 and B1 field inhomogeneity correction for glycosaminoglycan chemical exchange saturation transfer imaging.

PubMed

Müller-Lutz, Anja; Ljimani, Alexandra; Stabinska, Julia; Zaiss, Moritz; Boos, Johannes; Wittsack, Hans-Jörg; Schleich, Christoph

2018-05-14

The study compares glycosaminoglycan chemical exchange saturation transfer (gagCEST) imaging of intervertebral discs corrected for solely B 0 inhomogeneities or both B 0 and B 1 inhomogeneities. Lumbar intervertebral discs of 20 volunteers were examined with T 2 -weighted and gagCEST imaging. Field inhomogeneity correction was performed with B 0 correction only and with correction of both B 0 and B 1 . GagCEST effects measured by the asymmetric magnetization transfer ratio (MTR asym ) and signal-to-noise ratio (SNR) were compared between both methods. Significant higher MTR asym and SNR values were obtained in the nucleus pulposus using B 0 and B 1 correction compared with B 0 -corrected gagCEST. The GagCEST effect was significantly different in the nucleus pulposus compared with the annulus fibrosus for both methods. The B 0 and B 1 field inhomogeneity correction method leads to an improved quality of gagCEST imaging in IVDs compared with only B 0 correction.

Breast MRI at 7 Tesla with a bilateral coil and robust fat suppression.

PubMed

Brown, Ryan; Storey, Pippa; Geppert, Christian; McGorty, KellyAnne; Klautau Leite, Ana Paula; Babb, James; Sodickson, Daniel K; Wiggins, Graham C; Moy, Linda

2014-03-01

To develop a bilateral coil and fat suppressed T1-weighted sequence for 7 Tesla (T) breast MRI. A dual-solenoid coil and three-dimensional (3D) T1w gradient echo sequence with B1+ insensitive fat suppression (FS) were developed. T1w FS image quality was characterized through image uniformity and fat-water contrast measurements in 11 subjects. Signal-to-noise ratio (SNR) and flip angle maps were acquired to assess the coil performance. Bilateral contrast-enhanced and unilateral high resolution (0.6 mm isotropic, 6.5 min acquisition time) imaging highlighted the 7T SNR advantage. Reliable and effective FS and high image quality was observed in all subjects at 7T, indicating that the custom coil and pulse sequence were insensitive to high-field obstacles such as variable tissue loading. 7T and 3T image uniformity was similar (P=0.24), indicating adequate 7T B1+ uniformity. High 7T SNR and fat-water contrast enabled 0.6 mm isotropic imaging and visualization of a high level of fibroglandular tissue detail. 7T T1w FS bilateral breast imaging is feasible with a custom radiofrequency (RF) coil and pulse sequence. Similar image uniformity was achieved at 7T and 3T, despite different RF field behavior and variable coil-tissue interaction due to anatomic differences that might be expected to alter magnetic field patterns. Copyright © 2013 Wiley Periodicals, Inc.

Breast MRI at 7 Tesla with a Bilateral Coil and Robust Fat Suppression

PubMed Central

Brown, Ryan; Storey, Pippa; Geppert, Christian; McGorty, KellyAnne; Leite, Ana Paula Klautau; Babb, James; Sodickson, Daniel K.; Wiggins, Graham C.; Moy, Linda

2013-01-01

Purpose To develop a bilateral coil and optimized fat suppressed T1-weighted sequence for 7T breast MRI. Materials and Methods A dual-solenoid coil and 3D T1w gradient echo sequence with B1+ insensitive fat suppression (FS) were developed for 7T. T1w FS image quality was characterized through image uniformity and fat/water contrast measurements in 11 subjects. Signal-to-noise ratio (SNR) and flip angle maps were acquired to assess the coil performance. Bilateral contrast-enhanced and unilateral high resolution (0.6 mm isotropic, 6.5 min acquisition time) imaging highlighted the 7 T SNR advantage. Results Reliable and effective FS and high image quality was observed in all subjects at 7T, indicating that the custom coil and pulse sequence were insensitive to high-field obstacles such as variable tissue loading. 7T and 3T T1w FS image uniformity was similar (P=0.24), indicating adequate 7T B1+ uniformity. High 7T SNR and fat/water contrast enabled 0.6 mm isotropic imaging and visualization of a high level of fibroglandular tissue detail. Conclusion 7T T1w FS bilateral breast imaging is feasible with a custom RF coil and pulse sequence. Similar image uniformity was achieved at 7T and 3T, despite different RF field behavior and variable coil-tissue interaction due to anatomic differences that might be expected to alter magnetic field patterns. PMID:24123517

Direct and Indirect Effects of UV-B Exposure on Litter Decomposition: A Meta-Analysis

PubMed Central

Song, Xinzhang; Peng, Changhui; Jiang, Hong; Zhu, Qiuan; Wang, Weifeng

2013-01-01

Ultraviolet-B (UV-B) exposure in the course of litter decomposition may have a direct effect on decomposition rates via changing states of photodegradation or decomposer constitution in litter while UV-B exposure during growth periods may alter chemical compositions and physical properties of plants. Consequently, these changes will indirectly affect subsequent litter decomposition processes in soil. Although studies are available on both the positive and negative effects (including no observable effects) of UV-B exposure on litter decomposition, a comprehensive analysis leading to an adequate understanding remains unresolved. Using data from 93 studies across six biomes, this introductory meta-analysis found that elevated UV-B directly increased litter decomposition rates by 7% and indirectly by 12% while attenuated UV-B directly decreased litter decomposition rates by 23% and indirectly increased litter decomposition rates by 7%. However, neither positive nor negative effects were statistically significant. Woody plant litter decomposition seemed more sensitive to UV-B than herbaceous plant litter except under conditions of indirect effects of elevated UV-B. Furthermore, levels of UV-B intensity significantly affected litter decomposition response to UV-B (P<0.05). UV-B effects on litter decomposition were to a large degree compounded by climatic factors (e.g., MAP and MAT) (P<0.05) and litter chemistry (e.g., lignin content) (P<0.01). Results suggest these factors likely have a bearing on masking the important role of UV-B on litter decomposition. No significant differences in UV-B effects on litter decomposition were found between study types (field experiment vs. laboratory incubation), litter forms (leaf vs. needle), and decay duration. Indirect effects of elevated UV-B on litter decomposition significantly increased with decay duration (P<0.001). Additionally, relatively small changes in UV-B exposure intensity (30%) had significant direct effects on litter decomposition (P<0.05). The intent of this meta-analysis was to improve our understanding of the overall effects of UV-B on litter decomposition. PMID:23818993

Destruction of the Last Good Magnetic Surface in Diii-D Usn with Elms and C-Coils Shot 115467 due to C-Coils Using Maps

NASA Astrophysics Data System (ADS)

McCray, A.; Punjabi, A.; Ali, H.

2004-11-01

Unperturbed magnetic topology of DIII-D shot 115467 is described by the symmetric simple map (SSM) with map parameter k=0.2623 [1], then last good surface passes through x=0 and y=0.9995, q_edge=6.48 (same as in shot 115467) if six iterations of SSM are taken to be equivalent to single toroidal circuit of DIII-D. The dipole map (DM) calculates the effects of localized, external high mode numbers magnetic perturbations on motion of field lines. We use dipole map to describe effects of C-coils on field line trajectories in DIII-D. We apply DM after each iteration of SSM, with s=1.0021, x_dipole=1.5617, y_dipole= 0 [1] for shot 115467. We study the changes in the last good surface and its destruction as a function of I_C-coil. This work is supported by NASA SHARP program and DE-FG02-02ER54673. [1] H. Ali, A. Punjabi, A. Boozer, and T. Evans, presented at the 31st European Physical Society Plasma Physics Meeting, London, UK, June 29, 2004, paper P2-172.

Cross-sectional transport imaging in a multijunction solar cell

DOE PAGES

Haegel, Nancy M.; Ke, Chi -Wen; Taha, Hesham; ...

2016-12-01

Here, we combine a highly localized electron-beam point source excitation to generate excess free carriers with the spatial resolution of optical near-field imaging to map recombination in a cross-sectioned multijunction (Ga 0.5In 0.5P/GaIn 0.01As/Ge) solar cell. By mapping the spatial variations in emission of light for fixed generation (as opposed to traditional cathodoluminescence (CL), which maps integrated emission as a function of position of generation), it is possible to directly monitor the motion of carriers and photons. We observe carrier diffusion throughout the full width of the middle (GaInAs) cell, as well as luminescent coupling from point source excitation inmore » the top cell GaInP to the middle cell. Supporting CL and near-field photoluminescence (PL) measurements demonstrate the excitation-dependent Fermi level splitting effects that influence cross-sectioned spectroscopy results, as well as transport limitations on the spatial resolution of conventional cross-sectional far-field measurements.« less

Publications - RI 2001-1B | Alaska Division of Geological & Geophysical

Science.gov Websites

content DGGS RI 2001-1B Publication Details Title: Geologic map of the Chulitna region, southcentral , M.L., Reifenstuhl, R.R., and Clough, J.G., 2001, Geologic map of the Chulitna region, southcentral of the Chulitna region, southcentral Alaska, scale 1:63,360 (12.0 M) Digital Geospatial Data Digital

The Egyptian geomagnetic reference field to the Epoch, 2010.0

NASA Astrophysics Data System (ADS)

Deebes, H. A.; Abd Elaal, E. M.; Arafa, T.; Lethy, A.; El Emam, A.; Ghamry, E.; Odah, H.

2017-06-01

The present work is a compilation of two tasks within the frame of the project ;Geomagnetic Survey & Detailed Geomagnetic Measurements within the Egyptian Territory; funded by the ;Science and Technology Development Fund agency (STDF);. The National Research Institute of Astronomy and Geophysics (NRIAG), has conducted a new extensive land geomagnetic survey that covers the whole Egyptian territory. The field measurements have been done at 3212 points along all the asphalted roads, defined tracks, and ill-defined tracks in Egypt; with total length of 11,586 km. In the present work, the measurements cover for the first time new areas as: the southern eastern borders of Egypt including Halayeb and Shlatin, the Quattara depresion in the western desert, and the new roads between Farafra and Baharia oasis. Also marine geomagnetic survey have been applied for the first time in Naser lake. Misallat and Abu-Simble geomagnetic observatories have been used to reduce the field data to the Epoch 2010. During the field measurements, whenever possible, the old stations occupied by the previous observers have been re-occupied to determine the secular variations at these points. The geomagnetic anomaly maps, the normal geomagnetic field maps with their corresponding secular variation maps, the normal geomagnetic field equations of the geomagnetic elements (EGRF) and their corresponding secular variations equations, are outlined. The anomalous sites, as discovered from the anomaly maps are, only, mentioned. In addition, a correlation between the International Geomagnetic Reference Field (IGRF) 2010.0 and the Egyptian Geomagnetic Reference Field (EGRF) 2010 is indicated.

A medical device-grade T1 and ECV phantom for global T1 mapping quality assurance-the T1 Mapping and ECV Standardization in cardiovascular magnetic resonance (T1MES) program.

PubMed

Captur, Gabriella; Gatehouse, Peter; Keenan, Kathryn E; Heslinga, Friso G; Bruehl, Ruediger; Prothmann, Marcel; Graves, Martin J; Eames, Richard J; Torlasco, Camilla; Benedetti, Giulia; Donovan, Jacqueline; Ittermann, Bernd; Boubertakh, Redha; Bathgate, Andrew; Royet, Celine; Pang, Wenjie; Nezafat, Reza; Salerno, Michael; Kellman, Peter; Moon, James C

2016-09-22

T 1 mapping and extracellular volume (ECV) have the potential to guide patient care and serve as surrogate end-points in clinical trials, but measurements differ between cardiovascular magnetic resonance (CMR) scanners and pulse sequences. To help deliver T 1 mapping to global clinical care, we developed a phantom-based quality assurance (QA) system for verification of measurement stability over time at individual sites, with further aims of generalization of results across sites, vendor systems, software versions and imaging sequences. We thus created T1MES: The T1 Mapping and ECV Standardization Program. A design collaboration consisting of a specialist MRI small-medium enterprise, clinicians, physicists and national metrology institutes was formed. A phantom was designed covering clinically relevant ranges of T 1 and T 2 in blood and myocardium, pre and post-contrast, for 1.5 T and 3 T. Reproducible mass manufacture was established. The device received regulatory clearance by the Food and Drug Administration (FDA) and Conformité Européene (CE) marking. The T1MES phantom is an agarose gel-based phantom using nickel chloride as the paramagnetic relaxation modifier. It was reproducibly specified and mass-produced with a rigorously repeatable process. Each phantom contains nine differently-doped agarose gel tubes embedded in a gel/beads matrix. Phantoms were free of air bubbles and susceptibility artifacts at both field strengths and T 1 maps were free from off-resonance artifacts. The incorporation of high-density polyethylene beads in the main gel fill was effective at flattening the B 1 field. T 1 and T 2 values measured in T1MES showed coefficients of variation of 1 % or less between repeat scans indicating good short-term reproducibility. Temperature dependency experiments confirmed that over the range 15-30 °C the short-T 1 tubes were more stable with temperature than the long-T 1 tubes. A batch of 69 phantoms was mass-produced with random sampling of ten of these showing coefficients of variations for T 1 of 0.64 ± 0.45 % and 0.49 ± 0.34 % at 1.5 T and 3 T respectively. The T1MES program has developed a T 1 mapping phantom to CE/FDA manufacturing standards. An initial 69 phantoms with a multi-vendor user manual are now being scanned fortnightly in centers worldwide. Future results will explore T 1 mapping sequences, platform performance, stability and the potential for standardization.

Strain map of the tongue in normal and ALS speech patterns from tagged and diffusion MRI

NASA Astrophysics Data System (ADS)

Xing, Fangxu; Prince, Jerry L.; Stone, Maureen; Reese, Timothy G.; Atassi, Nazem; Wedeen, Van J.; El Fakhri, Georges; Woo, Jonghye

2018-03-01

Amyotrophic Lateral Sclerosis (ALS) is a neurological disease that causes death of neurons controlling muscle movements. Loss of speech and swallowing functions is a major impact due to degeneration of the tongue muscles. In speech studies using magnetic resonance (MR) techniques, diffusion tensor imaging (DTI) is used to capture internal tongue muscle fiber structures in three-dimensions (3D) in a non-invasive manner. Tagged magnetic resonance images (tMRI) are used to record tongue motion during speech. In this work, we aim to combine information obtained with both MR imaging techniques to compare the functionality characteristics of the tongue between normal and ALS subjects. We first extracted 3D motion of the tongue using tMRI from fourteen normal subjects in speech. The estimated motion sequences were then warped using diffeomorphic registration into the b0 spaces of the DTI data of two normal subjects and an ALS patient. We then constructed motion atlases by averaging all warped motion fields in each b0 space, and computed strain in the line of action along the muscle fiber directions provided by tractography. Strain in line with the fiber directions provides a quantitative map of the potential active region of the tongue during speech. Comparison between normal and ALS subjects explores the changing volume of compressing tongue tissues in speech facing the situation of muscle degradation. The proposed framework provides for the first time a dynamic map of contracting fibers in ALS speech patterns, and has the potential to provide more insight into the detrimental effects of ALS on speech.

Strain Map of the Tongue in Normal and ALS Speech Patterns from Tagged and Diffusion MRI.

PubMed

Xing, Fangxu; Prince, Jerry L; Stone, Maureen; Reese, Timothy G; Atassi, Nazem; Wedeen, Van J; El Fakhri, Georges; Woo, Jonghye

2018-02-01

Amyotrophic Lateral Sclerosis (ALS) is a neurological disease that causes death of neurons controlling muscle movements. Loss of speech and swallowing functions is a major impact due to degeneration of the tongue muscles. In speech studies using magnetic resonance (MR) techniques, diffusion tensor imaging (DTI) is used to capture internal tongue muscle fiber structures in three-dimensions (3D) in a non-invasive manner. Tagged magnetic resonance images (tMRI) are used to record tongue motion during speech. In this work, we aim to combine information obtained with both MR imaging techniques to compare the functionality characteristics of the tongue between normal and ALS subjects. We first extracted 3D motion of the tongue using tMRI from fourteen normal subjects in speech. The estimated motion sequences were then warped using diffeomorphic registration into the b0 spaces of the DTI data of two normal subjects and an ALS patient. We then constructed motion atlases by averaging all warped motion fields in each b0 space, and computed strain in the line of action along the muscle fiber directions provided by tractography. Strain in line with the fiber directions provides a quantitative map of the potential active region of the tongue during speech. Comparison between normal and ALS subjects explores the changing volume of compressing tongue tissues in speech facing the situation of muscle degradation. The proposed framework provides for the first time a dynamic map of contracting fibers in ALS speech patterns, and has the potential to provide more insight into the detrimental effects of ALS on speech.

Scanning micro-Hall probe mapping of magnetic flux distributions and current densities in YBa{sub 2}Cu{sub 3}O{sub 7}

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xing, W.; Heinrich, B.; Zhou, H.

1994-12-31

Mapping of the magnetic flux density B{sub z} (perpendicular to the film plane) for a YBa{sub 2}Cu{sub 3}O{sub 7} thin-film sample was carried out using a scanning micro-Hall probe. The sheet magnetization and sheet current densities were calculated from the B{sub z} distributions. From the known sheet magnetization, the tangential (B{sub x,y}) and normal components of the flux density B were calculated in the vicinity of the film. It was found that the sheet current density was mostly determined by 2B{sub x,y}/d, where d is the film thickness. The evolution of flux penetration as a function of applied field willmore » be shown.« less

Roadmap for searching cosmic rays correlated with the extraterrestrial neutrinos seen at IceCube

NASA Astrophysics Data System (ADS)

Carpio, J. A.; Gago, A. M.

2017-06-01

We have built sky maps showing the expected arrival directions of 120 EeV ultrahigh-energy cosmic rays (UHECRs) directionally correlated with the latest astrophysical neutrino tracks observed at IceCube, including the four-year high-energy starting events (HESEs) and the two-year northern tracks, taken as point sources. We have considered contributions to UHECR deflections from the Galactic and the extragalactic magnetic field and a UHECR composition compatible with the current expectations. We have used the Jansson-Farrar JF12 model for the Galactic magnetic field and an extragalactic magnetic field strength of 1 nG and coherence length of 1 Mpc. We observe that the regions outside of the Galactic plane are more strongly correlated with the neutrino tracks than those adjacent to or in it, where IceCube HESE events 37 and 47 are good candidates to search for excesses, or anisotropies, in the UHECR flux. On the other hand, clustered northern tracks around (l ,b )=(0 ° ,-3 0 ° ) and (l ,b )=(-15 0 ° ,-3 0 ° ) are promising candidates for a stacked point source search. For example, we have focused on the region of UHECR arrival directions, at 150 EeV, correlated with IceCube HESE event 37 located at (l ,b )=(-137.1 ° ,65.8 ° ) in the northern hemisphere, far away from the Galactic plane, obtaining an angular size ˜5 ° , being ˜3 ° for 200 EeV and ˜8 ° for 120 EeV. We report a p value of 0.20 for a stacked point source search using current Auger and Telescope Array data, consistent with current results from both collaborations. Using Telescope Array data alone, we found a projected live time of 72 years to find correlations, but clearly this must improve with the planned Auger upgrade.

Airborne gamma-ray spectrometer and magnetometer survey, Durango A, B, C, and D, Colorado. Volume I. Detail area. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1983-01-01

An airborne combined radiometric and magnetic survey was performed for the Department of Energy (DOE) over the Durango A, Durango B, Durango C, and Durango D Detail Areas of southwestern Colorado. The Durango A Detail Area is within the coverage of the Needle Mountains and Silverton 15' map sheets, and the Pole Creek Mountain, Rio Grande Pyramid, Emerald Lake, Granite Peak, Vallecito Reservoir, and Lemon Reservoir 7.5' map sheets of the National Topographic Map Series (NTMS). The Durango B Detail Area is within the coverage of the Silverton 15' map sheet and the Wetterhorn Peak, Uncompahgre Peak, Lake City, Redcloudmore » Peak, Lake San Cristobal, Pole Creek Mountain, and Finger Mesa 7.5' map sheets of the NTMS. The Durango C Detail Area is within the coverage of the Platoro and Wolf Creek Pass 15' map sheets of the NTMS. The Durango D Detail Area is within the coverage of the Granite Lake, Cimarrona Peak, Bear Mountain, and Oakbrush Ridge 7.5' map sheets of the NTMS. Radiometric data were corrected for live time, aircraft and equipment background, cosmic background, atmospheric radon, Compton scatter, and altitude dependence. The corrected data were statistically evaluated, gridded, and contoured to produce maps of the radiometric variables, uranium, potassium, and thorium; their ratios; and the residual magnetic field. These maps have been analyzed in order to produce a multi-variant analysis contour map based on the radiometric response of the individual geological units. A geochemical analysis has been performed, using the radiometric and magnetic contour maps, the multi-variant analysis map, and factor analysis techniques, to produce a geochemical analysis map for the area.« less

Wayfinding and Glaucoma: A Virtual Reality Experiment.

PubMed

Daga, Fábio B; Macagno, Eduardo; Stevenson, Cory; Elhosseiny, Ahmed; Diniz-Filho, Alberto; Boer, Erwin R; Schulze, Jürgen; Medeiros, Felipe A

2017-07-01

Wayfinding, the process of determining and following a route between an origin and a destination, is an integral part of everyday tasks. The purpose of this study was to investigate the impact of glaucomatous visual field loss on wayfinding behavior using an immersive virtual reality (VR) environment. This cross-sectional study included 31 glaucomatous patients and 20 healthy subjects without evidence of overall cognitive impairment. Wayfinding experiments were modeled after the Morris water maze navigation task and conducted in an immersive VR environment. Two rooms were built varying only in the complexity of the visual scene in order to promote allocentric-based (room A, with multiple visual cues) versus egocentric-based (room B, with single visual cue) spatial representations of the environment. Wayfinding tasks in each room consisted of revisiting previously visible targets that subsequently became invisible. For room A, glaucoma patients spent on average 35.0 seconds to perform the wayfinding task, whereas healthy subjects spent an average of 24.4 seconds (P = 0.001). For room B, no statistically significant difference was seen on average time to complete the task (26.2 seconds versus 23.4 seconds, respectively; P = 0.514). For room A, each 1-dB worse binocular mean sensitivity was associated with 3.4% (P = 0.001) increase in time to complete the task. Glaucoma patients performed significantly worse on allocentric-based wayfinding tasks conducted in a VR environment, suggesting visual field loss may affect the construction of spatial cognitive maps relevant to successful wayfinding. VR environments may represent a useful approach for assessing functional vision endpoints for clinical trials of emerging therapies in ophthalmology.

National Dam Safety Program. Woodward Dam (Inventory Number NY 507), Lower Hudson River Basin, Orange County, New York. Phase I Inspection Report,

DTIC Science & Technology

1981-06-30

omomrnuurI CONTENTS Location Plan Watershed Map Plate la : Field Sketch of Woodward Dam Plate Ib: Field Sketch of Greenleaf Dam Plate 2: Plan of Dam...goOFftkoww P L "mm alom+0a,0164m asm a Gooch~~A’~e mftLrrL - ol-ob o prat -n 4A ~ /e4 SojA S~tT IIV&-~ ~ i pqPiE5M 1%b, k&vs APPENDIX F...in ry flScrvice orflSi).. L I) Ip. lv.ay ConcrCLC Sp’%way Las j’ r. Joints Surfncc of S p 5.3i). y ’Mclarical Ar .Dra .o ~~~ LI:C azard Class E

Statistical simulations of the dust foreground to cosmic microwave background polarization

NASA Astrophysics Data System (ADS)

Vansyngel, F.; Boulanger, F.; Ghosh, T.; Wandelt, B.; Aumont, J.; Bracco, A.; Levrier, F.; Martin, P. G.; Montier, L.

2017-07-01

The characterization of the dust polarization foreground to the cosmic microwave background (CMB) is a necessary step toward the detection of the B-mode signal associated with primordial gravitational waves. We present a method to simulate maps of polarized dust emission on the sphere that is similar to the approach used for CMB anisotropies. This method builds on the understanding of Galactic polarization stemming from the analysis of Planck data. It relates the dust polarization sky to the structure of the Galactic magnetic field and its coupling with interstellar matter and turbulence. The Galactic magnetic field is modeled as a superposition of a mean uniform field and a Gaussian random (turbulent) component with a power-law power spectrum of exponent αM. The integration along the line of sight carried out to compute Stokes maps is approximated by a sum over a small number of emitting layers with different realizations of the random component of the magnetic field. The model parameters are constrained to fit the power spectra of dust polarization EE, BB, and TE measured using Planck data. We find that the slopes of the E and B power spectra of dust polarization are matched for αM = -2.5, an exponent close to that measured for total dust intensity but larger than the Kolmogorov exponent - 11/3. The model allows us to compute multiple realizations of the Stokes Q and U maps for different realizations of the random component of the magnetic field, and to quantify the variance of dust polarization spectra for any given sky area outside of the Galactic plane. The simulations reproduce the scaling relation between the dust polarization power and the mean total dust intensity including the observed dispersion around the mean relation. We also propose a method to carry out multifrequency simulations, including the decorrelation measured recently by Planck, using a given covariance matrix of the polarization maps. These simulations are well suited to optimize component separation methods and to quantify the confidence with which the dust and CMB B-modes can be separated in present and future experiments. We also provide an astrophysical perspective on our phenomenological modeling of the dust polarization spectra.

Undergraduate Field Courses in Volcanology at the University of California, Davis

NASA Astrophysics Data System (ADS)

Schiffman, P.

2002-05-01

At U.C. Davis, undergraduate Geology majors have two opportunities to participate in extended field courses in volcanology: (1) all majors spend one week in a volcanology module during their six-week, "capstone" Summer Field Geology (GEL 110) course, and (2) all majors may enroll in a two-week, Introductory Volcanology course (GEL 138) offered each summer at Kilauea Volcano. The former course is required of all majors in order to fulfill their B.S. degree requirements, whereas the latter fulfills upper division elective units for either the B.A. or B.S. degree in Geology. The volcanology module in GEL 110 is based at U.C.'s White Mountain Research Station in Bishop, California and includes four separate exercises: (1) mapping patterns of consolidation of tephra at the Black Point tuff cone in order to understand the processes of palagonitization, (2) contouring graphic mean and sorting for tephra collected from the Red Cones cinder cone to understand Strombolian processes, (3) measuring a stratigraphic section of the Bishop Tuff in the lower Owens River Gorge to differentiate cooling units in ignimbrites, and (4) mapping the relationships amongst pumice units and obsidian at the Glass Mountain flow to understand evolution of silicic flows. Most exercises require laboratory measurements for grain size or density (Mayfield and Schiffman, 1998). GEL 138, based at the Kilauea Military Camp, includes a daily schedule of morning lectures and afternoon field excursions and exercises. Exercises include: (1) measuring a stratigraphic section of the Keanakako'i Ash Member to interpret pre-1790 periods of hydrovolcanism, (2) measuring and contouring ground temperatures in the Steaming Bluffs thermal area (3) conducting granulometric measurements of tephra from the Nanawale sand hills to understand the genesis of littoral cones, (4) mapping of soil pH around the perimeter of Kilauea Caldera to illuminate climatic effects (i.e.,vog and wind patterns) on the summit region, and (5) mapping lava flows from the SW rift zone of Mauna Loa at South Point. Reference: Mayfield, J. and Schiffman, P., (1998) Measuring the density of porous volcanic rocks in the field using a Saran coating. Journal of Geological Education 46, 460-464.

Automated high resolution mapping of coffee in Rwanda using an expert Bayesian network

NASA Astrophysics Data System (ADS)

Mukashema, A.; Veldkamp, A.; Vrieling, A.

2014-12-01

African highland agro-ecosystems are dominated by small-scale agricultural fields that often contain a mix of annual and perennial crops. This makes such systems difficult to map by remote sensing. We developed an expert Bayesian network model to extract the small-scale coffee fields of Rwanda from very high resolution data. The model was subsequently applied to aerial orthophotos covering more than 99% of Rwanda and on one QuickBird image for the remaining part. The method consists of a stepwise adjustment of pixel probabilities, which incorporates expert knowledge on size of coffee trees and fields, and on their location. The initial naive Bayesian network, which is a spectral-based classification, yielded a coffee map with an overall accuracy of around 50%. This confirms that standard spectral variables alone cannot accurately identify coffee fields from high resolution images. The combination of spectral and ancillary data (DEM and a forest map) allowed mapping of coffee fields and associated uncertainties with an overall accuracy of 87%. Aggregated to district units, the mapped coffee areas demonstrated a high correlation with the coffee areas reported in the detailed national coffee census of 2009 (R2 = 0.92). Unlike the census data our map provides high spatial resolution of coffee area patterns of Rwanda. The proposed method has potential for mapping other perennial small scale cropping systems in the East African Highlands and elsewhere.

Visual Field Map Clusters in High-Order Visual Processing: Organization of V3A/V3B and a New Cloverleaf Cluster in the Posterior Superior Temporal Sulcus

PubMed Central

Barton, Brian; Brewer, Alyssa A.

2017-01-01

The cortical hierarchy of the human visual system has been shown to be organized around retinal spatial coordinates throughout much of low- and mid-level visual processing. These regions contain visual field maps (VFMs) that each follows the organization of the retina, with neighboring aspects of the visual field processed in neighboring cortical locations. On a larger, macrostructural scale, groups of such sensory cortical field maps (CFMs) in both the visual and auditory systems are organized into roughly circular cloverleaf clusters. CFMs within clusters tend to share properties such as receptive field distribution, cortical magnification, and processing specialization. Here we use fMRI and population receptive field (pRF) modeling to investigate the extent of VFM and cluster organization with an examination of higher-level visual processing in temporal cortex and compare these measurements to mid-level visual processing in dorsal occipital cortex. In human temporal cortex, the posterior superior temporal sulcus (pSTS) has been implicated in various neuroimaging studies as subserving higher-order vision, including face processing, biological motion perception, and multimodal audiovisual integration. In human dorsal occipital cortex, the transverse occipital sulcus (TOS) contains the V3A/B cluster, which comprises two VFMs subserving mid-level motion perception and visuospatial attention. For the first time, we present the organization of VFMs in pSTS in a cloverleaf cluster. This pSTS cluster contains four VFMs bilaterally: pSTS-1:4. We characterize these pSTS VFMs as relatively small at ∼125 mm2 with relatively large pRF sizes of ∼2–8° of visual angle across the central 10° of the visual field. V3A and V3B are ∼230 mm2 in surface area, with pRF sizes here similarly ∼1–8° of visual angle across the same region. In addition, cortical magnification measurements show that a larger extent of the pSTS VFM surface areas are devoted to the peripheral visual field than those in the V3A/B cluster. Reliability measurements of VFMs in pSTS and V3A/B reveal that these cloverleaf clusters are remarkably consistent and functionally differentiable. Our findings add to the growing number of measurements of widespread sensory CFMs organized into cloverleaf clusters, indicating that CFMs and cloverleaf clusters may both be fundamental organizing principles in cortical sensory processing. PMID:28293182

Evaluation of candidate geomagnetic field models for IGRF-11

NASA Astrophysics Data System (ADS)

Finlay, C. C.; Maus, S.; Beggan, C. D.; Hamoudi, M.; Lowes, F. J.; Olsen, N.; Thébault, E.

2010-10-01

The eleventh generation of the International Geomagnetic Reference Field (IGRF) was agreed in December 2009 by a task force appointed by the International Association of Geomagnetism and Aeronomy (IAGA) Division V Working Group V-MOD. New spherical harmonic main field models for epochs 2005.0 (DGRF-2005) and 2010.0 (IGRF-2010), and predictive linear secular variation for the interval 2010.0-2015.0 (SV-2010-2015) were derived from weighted averages of candidate models submitted by teams led by DTU Space, Denmark (team A); NOAA/NGDC, U.S.A. (team B); BGS, U.K. (team C); IZMIRAN, Russia (team D); EOST, France (team E); IPGP, France (team F); GFZ, Germany (team G) and NASA-GSFC, U.S.A. (team H). Here, we report the evaluations of candidate models carried out by the IGRF-11 task force during October/November 2009 and describe the weightings used to derive the new IGRF-11 model. The evaluations include calculations of root mean square vector field differences between the candidates, comparisons of the power spectra, and degree correlations between the candidates and a mean model. Coefficient by coefficient analysis including determination of weighting factors used in a robust estimation of mean coefficients is also reported. Maps of differences in the vertical field intensity at Earth's surface between the candidates and weighted mean models are presented. Candidates with anomalous aspects are identified and efforts made to pinpoint both troublesome coefficients and geographical regions where large variations between candidates originate. A retrospective analysis of IGRF-10 main field candidates for epoch 2005.0 and predictive secular variation candidates for 2005.0-2010.0 using the new IGRF-11 models as a reference is also reported. The high quality and consistency of main field models derived using vector satellite data is demonstrated; based on internal consistency DGRF-2005 has a formal root mean square vector field error over Earth's surface of 1.0 nT. Difficulties nevertheless remain in accurately forecasting field evolution only five years into the future.

High-performance magnetic field sensor based on superconducting quantum interference filters

NASA Astrophysics Data System (ADS)

Caputo, P.; Oppenländer, J.; Häussler, Ch.; Tomes, J.; Friesch, A.; Träuble, T.; Schopohl, N.

2004-08-01

We have developed an absolute magnetic field sensor using a superconducting quantum interference filter (SQIF) made of high-Tc grain-boundary Josephson junctions. The device shows the typical magnetic-field-dependent voltage response V(B ), which is a sharp deltalike dip in the vicinity of zero-magnetic field. When the SQIF is cooled with magnetic shield, and then the shield is removed, the presence of the ambient magnetic field induces a shift of the dip position from B0≈0 to a value B ≈B1, which is about the average value of the Earth's magnetic field, at our latitude. When the SQIF is cooled in the ambient field without shielding, the dip is first found at B ≈B1, and the further shielding of the SQIF results in a shift of the dip towards B0≈0. The low hysteresis observed in the sequence of experiments (less than 5% of B1) makes SQIFs suitable for high precision measurements of the absolute magnetic field. The experimental results are discussed in view of potential applications of high-Tc SQIFs in magnetometry.

SU-E-J-119: Head-And-Neck Digital Phantoms for Geometric and Dosimetric Uncertainty Evaluation of CT-CBCT Deformable Image Registration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shen, Z; Koyfman, S; Xia, P

2015-06-15

Purpose: To evaluate geometric and dosimetric uncertainties of CT-CBCT deformable image registration (DIR) algorithms using digital phantoms generated from real patients. Methods: We selected ten H&N cancer patients with adaptive IMRT. For each patient, a planning CT (CT1), a replanning CT (CT2), and a pretreatment CBCT (CBCT1) were used as the basis for digital phantom creation. Manually adjusted meshes were created for selected ROIs (e.g. PTVs, brainstem, spinal cord, mandible, and parotids) on CT1 and CT2. The mesh vertices were input into a thin-plate spline algorithm to generate a reference displacement vector field (DVF). The reference DVF was applied tomore » CBCT1 to create a simulated mid-treatment CBCT (CBCT2). The CT-CBCT digital phantom consisted of CT1 and CBCT2, which were linked by the reference DVF. Three DIR algorithms (Demons, B-Spline, and intensity-based) were applied to these ten digital phantoms. The images, ROIs, and volumetric doses were mapped from CT1 to CBCT2 using the DVFs computed by these three DIRs and compared to those mapped using the reference DVF. Results: The average Dice coefficients for selected ROIs were from 0.83 to 0.94 for Demons, from 0.82 to 0.95 for B-Spline, and from 0.67 to 0.89 for intensity-based DIR. The average Hausdorff distances for selected ROIs were from 2.4 to 6.2 mm for Demons, from 1.8 to 5.9 mm for B-Spline, and from 2.8 to 11.2 mm for intensity-based DIR. The average absolute dose errors for selected ROIs were from 0.7 to 2.1 Gy for Demons, from 0.7 to 2.9 Gy for B- Spline, and from 1.3 to 4.5 Gy for intensity-based DIR. Conclusion: Using clinically realistic CT-CBCT digital phantoms, Demons and B-Spline were shown to have similar geometric and dosimetric uncertainties while intensity-based DIR had the worst uncertainties. CT-CBCT DIR has the potential to provide accurate CBCT-based dose verification for H&N adaptive radiotherapy. Z Shen: None; K Bzdusek: an employee of Philips Healthcare; S Koyfman: None; P Xia: received research grants from Philips Healthcare and Siemens Healthcare.« less

Thermodynamics of Ising spins on the triangular kagome lattice: Exact analytical method and Monte Carlo simulations

NASA Astrophysics Data System (ADS)

Loh, Y. L.; Yao, D. X.; Carlson, E. W.

2008-04-01

A new class of two-dimensional magnetic materials Cu9X2(cpa)6ṡxH2O ( cpa=2 -carboxypentonic acid; X=F,Cl,Br ) was recently fabricated in which Cu sites form a triangular kagome lattice (TKL). As the simplest model of geometric frustration in such a system, we study the thermodynamics of Ising spins on the TKL using exact analytic method as well as Monte Carlo simulations. We present the free energy, internal energy, specific heat, entropy, sublattice magnetizations, and susceptibility. We describe the rich phase diagram of the model as a function of coupling constants, temperature, and applied magnetic field. For frustrated interactions in the absence of applied field, the ground state is a spin liquid phase with residual entropy per spin s0/kB=(1)/(9)ln72≈0.4752… . In weak applied field, the system maps to the dimer model on a honeycomb lattice, with residual entropy 0.0359 per spin and quasi-long-range order with power-law spin-spin correlations that should be detectable by neutron scattering. The power-law correlations become exponential at finite temperatures, but the correlation length may still be long.

Defeating the Warrior: genetic architecture of triticale resistance against a novel aggressive yellow rust race.

PubMed

Losert, Dominik; Maurer, Hans Peter; Leiser, Willmar L; Würschum, Tobias

2017-04-01

Genome-wide association mapping of resistance against the novel, aggressive 'Warrior' race of yellow rust in triticale revealed a genetic architecture with some medium-effect QTL and a quantitative component, which in combination confer high levels of resistance on both leaves and ears. Yellow rust is an important destructive fungal disease in small grain cereals and the exotic 'Warrior' race has recently conquered Europe. The aim of this study was to investigate the genetic architecture of yellow rust resistance in hexaploid winter triticale as the basis for a successful resistance breeding. To this end, a diverse panel of 919 genotypes was evaluated for yellow rust infection on leaves and ears in multi-location field trials and genotyped by genotyping-by-sequencing as well as for known Yr resistance loci. Genome-wide association mapping identified ten quantitative trait loci (QTL) for yellow rust resistance on the leaves and seven of these also for ear resistance. The total genotypic variance explained by the QTL amounted to 44.0% for leaf and 26.0% for ear resistance. The same three medium-effect QTL were identified for both traits on chromosomes 1B, 2B, and 7B. Interestingly, plants pyramiding the resistance allele of all three medium-effect QTL were generally most resistant, but constitute less than 5% of the investigated triticale breeding material. Nevertheless, a genome-wide prediction yielded a higher predictive ability than prediction based on these three QTL. Taken together, our results show that yellow rust resistance in winter triticale is genetically complex, including both medium-effect QTL as well as a quantitative resistance component. Resistance to the novel 'Warrior' race of this fungal pathogen is consequently best achieved by recurrent selection in the field based on identified resistant lines and can potentially be assisted by genomic approaches.

More on the scalar-tensor BF theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Singh, Harvendra

2009-09-15

This work is based on an earlier proposal [H. Singh, Phys. Lett. B 673, 68 (2009)] that the membrane BF theory consists of matter fields along with Chern-Simons fields as well as the auxiliary pairs of scalar and tensor fields. In particular, we discuss the supersymmetry aspects of such a membrane theory. It is concluded that the theory possesses maximal supersymmetry, and it is related to the L-BLG theory via a field map. We obtain fuzzy-sphere solution, and corresponding tensor field configuration is given.

Mapping energetics of atom probe evaporation events through first principles calculations.

PubMed

Peralta, Joaquín; Broderick, Scott R; Rajan, Krishna

2013-09-01

The purpose of this work is to use atomistic modeling to determine accurate inputs into the atom probe tomography (APT) reconstruction process. One of these inputs is evaporation field; however, a challenge occurs because single ions and dimers have different evaporation fields. We have calculated the evaporation field of Al and Sc ions and Al-Al and Al-Sc dimers from an L1₂-Al₃Sc surface using ab initio calculations and with a high electric field applied to the surface. The evaporation field is defined as the electric field at which the energy barrier size is calculated as zero, corresponding to the minimum field that atoms from the surface can break their bonds and evaporate from the surface. The evaporation field of the surface atoms are ranked from least to greatest as: Al-Al dimer, Al ion, Sc ion, and Al-Sc dimer. The first principles results were compared with experimental data in the form of an ion evaporation map, which maps multi-ion evaporations. From the ion evaporation map of L1₂-Al₃Sc, we extract relative evaporation fields and identify that an Al-Al dimer has a lower evaporation field than an Al-Sc dimer. Additionally, comparatively an Al-Al surface dimer is more likely to evaporate as a dimer, while an Al-Sc surface dimer is more likely to evaporate as single ions. These conclusions from the experiment agree with the ab initio calculations, validating the use of this approach for modeling APT energetics. Copyright © 2013 Elsevier B.V. All rights reserved.

Whole-genome mapping reveals a large chromosomal inversion on Iberian Brucella suis biovar 2 strains.

PubMed

Ferreira, Ana Cristina; Dias, Ricardo; de Sá, Maria Inácia Corrêa; Tenreiro, Rogério

2016-08-30

Optical mapping is a technology able to quickly generate high resolution ordered whole-genome restriction maps of bacteria, being a proven approach to search for diversity among bacterial isolates. In this work, optical whole-genome maps were used to compare closely-related Brucella suis biovar 2 strains. This biovar is the unique isolated in domestic pigs and wild boars in Portugal and Spain and most of the strains share specific molecular characteristics establishing an Iberian clonal lineage that can be differentiated from another lineage mainly isolated in several Central European countries. We performed the BamHI whole-genome optical maps of five B. suis biovar 2 field strains, isolated from wild boars in Portugal and Spain (three from the Iberian lineage and two from the Central European one) as well as of the reference strain B. suis biovar 2 ATCC 23445 (Central European lineage, Denmark). Each strain showed a distinct, highly individual configuration of 228-231 BamHI fragments. Nevertheless, a low divergence was globally observed in chromosome II (1.6%) relatively to chromosome I (2.4%). Optical mapping also disclosed genomic events associated with B. suis strains in chromosome I, namely one indel (3.5kb) and one large inversion (944kb). By using targeted-PCR in a set of 176 B. suis strains, including all biovars and haplotypes, the indel was found to be specific of the reference strain ATCC 23445 and the large inversion was shown to be an exclusive genomic marker of the Iberian clonal lineage of biovar 2. Copyright © 2016 Elsevier B.V. All rights reserved.

Visibility and artifacts of gold fiducial markers used for image guided radiation therapy of pancreatic cancer on MRI

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gurney-Champion, Oliver J., E-mail: o.j.gurney-champion@amc.uva.nl; Lens, Eelco; Horst, Astrid van der

2015-05-15

Purpose: In radiation therapy of pancreatic cancer, tumor alignment prior to each treatment fraction is improved when intratumoral gold fiducial markers (from here onwards: markers), which are visible on computed tomography (CT) and cone beam CT, are used. Visibility of these markers on magnetic resonance imaging (MRI) might improve image registration between CT and magnetic resonance (MR) images for tumor delineation purposes. However, concomitant image artifacts induced by markers are undesirable. The extent of visibility and artifact size depend on MRI-sequence parameters. The authors’ goal was to determine for various markers their potential to be visible and to generate artifacts,more » using measures that are independent of the MRI-sequence parameters. Methods: The authors selected ten different markers suitable for endoscopic placement in the pancreas and placed them into a phantom. The markers varied in diameter (0.28–0.6 mm), shape, and iron content (0%–0.5%). For each marker, the authors calculated T{sub 2}{sup ∗}-maps and ΔB{sub 0}-maps using MRI measurements. A decrease in relaxation time T{sub 2}{sup ∗} can cause signal voids, associated with visibility, while a change in the magnetic field B{sub 0} can cause signal shifts, which are associated with artifacts. These shifts inhibit accurate tumor delineation. As a measure for potential visibility, the authors used the volume of low T{sub 2}{sup ∗}, i.e., the volume for which T{sub 2}{sup ∗} differed from the background by >15 ms. As a measure for potential artifacts, the authors used the volume for which |ΔB{sub 0}| > 9.4 × 10{sup −8} T (4 Hz). To test whether there is a correlation between visibility and artifact size, the authors calculated the Spearman’s correlation coefficient (R{sub s}) between the volume of low T{sub 2}{sup ∗} and the volume of high |ΔB{sub 0}|. The authors compared the maps with images obtained using a clinical MR-sequence. Finally, for the best visible marker as well as the marker that showed the smallest artifact, the authors compared the phantom data with in vivo MR-images in four pancreatic cancer patients. Results: The authors found a strong correlation (R{sub s} = 1.00, p < 0.01) between the volume of low T{sub 2}{sup ∗} and the volume with high |ΔB{sub 0}|. Visibility in clinical MR-images increased with lower T{sub 2}{sup ∗}. Signal shift artifacts became worse for markers with high |ΔB{sub 0}|. The marker that was best visible in the phantom, a folded marker with 0.5% iron content, was also visible in vivo, but showed artifacts on diffusion weighted images. The marker with the smallest artifact in the phantom, a small, stretched, ironless marker, was indiscernible on in vivo MR-images. Conclusions: Changes in T{sub 2}{sup ∗} and ΔB{sub 0} are sequence-independent measures for potential visibility and artifact size, respectively. Improved visibility of markers correlates strongly to signal shift artifacts; therefore, marker choice will depend on the clinical purpose. When visibility of the markers is most important, markers that contain iron are optimal, preferably in a folded configuration. For artifact sensitive imaging, small ironless markers are best, preferably in a stretched configuration.« less

Characterization of paramagnetic effects of molecular oxygen on blood oxygenation level-dependent-modulated hyperoxic contrast studies of the human brain.

PubMed

Pilkinton, David T; Gaddam, Santosh R; Reddy, Ravinder

2011-09-01

In hyperoxic contrast studies modulated by the blood oxygenation level-dependent effect, it is often assumed that hyperoxia is a purely intravascular, positive contrast agent in T 2*-weighted images, and the effects that are not due to blood oxygenation level-dependent contrast are small enough to be ignored. In this study, this assumption is re-evaluated and non-blood oxygenation level-dependent effects in T 2*-weighted hyperoxic contrast studies of the human brain were characterized. We observed significant negative signal changes in T 2*-weighted images in the frontal lobes; B(0) maps suggest that this effect was primarily due to increased intravoxel dephasing from increased static field inhomogeneity due to susceptibility changes from oxygen in and around the upper airway. These static field effects were shown to scale with magnetic field strength. Signal changes observed around the brain periphery and in the ventricles suggest the effect of image distortions from oxygen-induced bulk B(0) shifts, along with a possible contribution from decreased T 2* due to oxygen dissolved in the cerebrospinal fluid. Reducing the concentration of inhaled oxygen was shown to mitigate negative contrast of molecular oxygen due to these effects, while still maintaining sufficient blood oxygenation level-dependent contrast to produce accurate measurements of cerebral blood volume. Copyright © 2011 Wiley-Liss, Inc.

FARADAY TOMOGRAPHY OF THE NORTH POLAR SPUR: CONSTRAINTS ON THE DISTANCE TO THE SPUR AND ON THE MAGNETIC FIELD OF THE GALAXY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sun, X. H.; Gaensler, B. M.; Landecker, T. L.

2015-09-20

We present radio continuum and polarization images of the North Polar Spur (NPS) from the Global Magneto-ionic Medium Survey conducted with the Dominion Radio Astrophysical Observatory 26 m Telescope. We fit polarization angle versus wavelength squared over 2048 frequency channels from 1280 to 1750 MHz to obtain a Faraday rotation measure (RM) map of the NPS. Combining this RM map with a published Faraday depth (FD) map of the entire Galaxy in this direction, we derive the FD introduced by the NPS and the Galactic interstellar medium (ISM) in front of and behind the NPS. The FD contributed by themore » NPS is close to zero, indicating that the NPS is an emitting only feature. The FD caused by the ISM in front of the NPS is consistent with zero at b > 50°, implying that this part of the NPS is local at a distance of approximately several hundred parsecs. The FD contributed by the ISM behind the NPS gradually increases with Galactic latitude up to b = 44°, and decreases at higher Galactic latitudes. This implies that either the part of the NPS at b < 44° is distant or the NPS is local but there is a sign change of the large-scale magnetic field. If the NPS is local, there is then no evidence for a large-scale anti-symmetry pattern in the FD of the Milky Way. The FD introduced by the ISM behind the NPS at latitudes b > 50° can be explained by including a coherent vertical magnetic field.« less

NovoTTF™-100A System (Tumor Treating Fields) transducer array layout planning for glioblastoma: a NovoTAL™ system user study.

PubMed

Chaudhry, Aafia; Benson, Laura; Varshaver, Michael; Farber, Ori; Weinberg, Uri; Kirson, Eilon; Palti, Yoram

2015-11-11

Optune™, previously known as the NovoTTF-100A System™, generates Tumor Treating Fields (TTFields), an effective anti-mitotic therapy for glioblastoma. The system delivers intermediate frequency, alternating electric fields to the supratentorial brain. Patient therapy is personalized by configuring transducer array layout placement on the scalp to the tumor site using MRI measurements and the NovoTAL System. Transducer array layout mapping optimizes therapy by maximizing electric field intensity to the tumor site. This study evaluated physician performance in conducting transducer array layout mapping using the NovoTAL System compared with mapping performed by the Novocure in-house clinical team. Fourteen physicians (7 neuro-oncologists, 4 medical oncologists, and 3 neurosurgeons) evaluated five blinded cases of recurrent glioblastoma and performed head size and tumor location measurements using a standard Digital Imaging and Communications in Medicine reader. Concordance with Novocure measurement and intra- and inter-rater reliability were assessed using relevant correlation coefficients. The study criterion for success was a concordance correlation coefficient (CCC) >0.80. CCC for each physician versus Novocure on 20 MRI measurements was 0.96 (standard deviation, SD ± 0.03, range 0.90-1.00), indicating very high agreement between the two groups. Intra- and inter-rater reliability correlation coefficients were similarly high: 0.83 (SD ±0.15, range 0.54-1.00) and 0.80 (SD ±0.18, range 0.48-1.00), respectively. This user study demonstrated an excellent level of concordance between prescribing physicians and Novocure in-house clinical teams in performing transducer array layout planning. Intra-rater reliability was very high, indicating reproducible performance. Physicians prescribing TTFields, when trained on the NovoTAL System, can independently perform transducer array layout mapping required for the initiation and maintenance of patients on TTFields therapy.

Geologic Field Notes, Geochemical Analyses, and Field Photographs of Outcrops and Rock Samples from the Big Delta B-1 Quadrangle, East-Central Alaska

USGS Publications Warehouse

Day, Warren C.; O'Neill, J. Michael

2008-01-01

The U.S. Geological Survey, in cooperation with the Alaska Department of Natural Resources Division of Mining, Land, and Water, has released a geologic map of the Big Delta B-1 quadrangle of east-central Alaska (Day and others, 2007). This companion report presents the major element oxide and trace element geochemical analyses, including those for gold, silver, and base metals, for representative rock units and for grab samples from quartz veins and mineralized zones within the quadrangle. Also included are field station locations, field notes, structural data, and field photographs based primarily on observations by W.C. Day with additions by J.M. O'Neill and B.M. Gamble, all of the U.S. Geological Survey. The data are provided in both Microsoft Excel spread sheet format and as a Microsoft Access database.

Connecting the dots: a correlation between ionizing radiation and cloud mass-loss rate traced by optical integral field spectroscopy

NASA Astrophysics Data System (ADS)

McLeod, A. F.; Gritschneder, M.; Dale, J. E.; Ginsburg, A.; Klaassen, P. D.; Mottram, J. C.; Preibisch, T.; Ramsay, S.; Reiter, M.; Testi, L.

2016-11-01

We present an analysis of the effect of feedback from O- and B-type stars with data from the integral field spectrograph Multi Unit Spectroscopic Explorer (MUSE) mounted on the Very Large Telescope of pillar-like structures in the Carina Nebular Complex, one of the most massive star-forming regions in the Galaxy. For the observed pillars, we compute gas electron densities and temperatures maps, produce integrated line and velocity maps of the ionized gas, study the ionization fronts at the pillar tips, analyse the properties of the single regions, and detect two ionized jets originating from two distinct pillar tips. For each pillar tip, we determine the incident ionizing photon flux Q0, pil originating from the nearby massive O- and B-type stars and compute the mass-loss rate dot{M} of the pillar tips due to photoevaporation caused by the incident ionizing radiation. We combine the results of the Carina data set with archival MUSE data of a pillar in NGC 3603 and with previously published MUSE data of the Pillars of Creation in M16, and with a total of 10 analysed pillars, find tight correlations between the ionizing photon flux and the electron density, the electron density and the distance from the ionizing sources, and the ionizing photon flux and the mass-loss rate. The combined MUSE data sets of pillars in regions with different physical conditions and stellar content therefore yield an empirical quantification of the feedback effects of ionizing radiation. In agreement with models, we find that dot{M}∝ Q_0,pil^{1/2}.

Gravity field error analysis: Applications of GPS receivers and gradiometers on low orbiting platforms

NASA Technical Reports Server (NTRS)

Schrama, E.

1990-01-01

The concept of a Global Positioning System (GPS) receiver as a tracking facility and a gradiometer as a separate instrument on a low orbiting platform offers a unique tool to map the Earth's gravitational field with unprecedented accuracies. The former technique allows determination of the spacecraft's ephemeris at any epoch to within 3 to 10 cm, the latter permits the measurement of the tensor of second order derivatives of the gravity field to within 0.01 to 0.0001 Eotvos units depending on the type of gradiometer. First, a variety of error sources in gradiometry where emphasis is placed on the rotational problem pursuing as well a static as a dynamic approach is described. Next, an analytical technique is described and applied for an error analysis of gravity field parameters from gradiometer and GPS observation types. Results are discussed for various configurations proposed on Topex/Poseidon, Gravity Probe-B, and Aristoteles, indicating that GPS only solutions may be computed up to degree and order 35, 55, and 85 respectively, whereas a combined GPS/gradiometer experiment on Aristoteles may result in an acceptable solution up to degree and order 240.

Construction and analysis of a high-density genetic linkage map in cabbage (Brassica oleracea L. var. capitata)

PubMed Central

2012-01-01

Background Brassica oleracea encompass a family of vegetables and cabbage that are among the most widely cultivated crops. In 2009, the B. oleracea Genome Sequencing Project was launched using next generation sequencing technology. None of the available maps were detailed enough to anchor the sequence scaffolds for the Genome Sequencing Project. This report describes the development of a large number of SSR and SNP markers from the whole genome shotgun sequence data of B. oleracea, and the construction of a high-density genetic linkage map using a double haploid mapping population. Results The B. oleracea high-density genetic linkage map that was constructed includes 1,227 markers in nine linkage groups spanning a total of 1197.9 cM with an average of 0.98 cM between adjacent loci. There were 602 SSR markers and 625 SNP markers on the map. The chromosome with the highest number of markers (186) was C03, and the chromosome with smallest number of markers (99) was C09. Conclusions This first high-density map allowed the assembled scaffolds to be anchored to pseudochromosomes. The map also provides useful information for positional cloning, molecular breeding, and integration of information of genes and traits in B. oleracea. All the markers on the map will be transferable and could be used for the construction of other genetic maps. PMID:23033896

Dissipation in the superconducting mixed state in the presence of a small oscillatory magnetic-field component

NASA Astrophysics Data System (ADS)

Risse, M. P.; Aikele, M. G.; Doettinger, S. G.; Huebener, R. P.; Tsuei, C. C.; Naito, M.

1997-06-01

We have studied the electric resistivity in superconducting amorphous Mo3Si films in a perpendicular magnetic field B0+B1 sin ωt with B1<0 we observed perfectly Ohmic behavior at currents I<

Passive acoustic mapping of magnetic microbubbles for cavitation enhancement and localization.

PubMed

Crake, Calum; Victor, Marie de Saint; Owen, Joshua; Coviello, Christian; Collin, Jamie; Coussios, Constantin-C; Stride, Eleanor

2015-01-21

Magnetic targeting of microbubbles functionalized with superparamagnetic nanoparticles has been demonstrated previously for diagnostic (B-mode) ultrasound imaging and shown to enhance gene delivery in vitro and in vivo. In the present work, passive acoustic mapping (PAM) was used to investigate the potential of magnetic microbubbles for localizing and enhancing cavitation activity under focused ultrasound. Suspensions of magnetic microbubbles consisting of 1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC), air and 10 nm diameter iron oxide nanoparticles were injected into a tissue mimicking phantom at different flow velocities (from 0 to 50 mm s(-1)) with or without an applied magnetic field. Microbubbles were excited using a 500 kHz single element focused transducer at peak negative focal pressures of 0.1-1.0 MPa, while a 64 channel imaging array passively recorded their acoustic emissions. Magnetic localization of microbubble-induced cavitation activity was successfully achieved and could be resolved using PAM as a shift in the spatial distribution and increases in the intensity and sustainability of cavitation activity under the influence of a magnetic field. Under flow conditions at shear rates of up to 100 s(-1) targeting efficacy was maintained. Application of a magnetic field was shown to consistently increase the energy of cavitation emissions by a factor of 2-5 times over the duration of exposures compared to the case without targeting, which was approximately equivalent to doubling the injected microbubble dose. These results suggest that magnetic targeting could be used to localize and increase the concentration of microbubbles and hence cavitation activity for a given systemic dose of microbubbles or ultrasound intensity.

Mapping the Structure-Function Relationship in Glaucoma and Healthy Patients Measured with Spectralis OCT and Humphrey Perimetry

PubMed Central

Muñoz–Negrete, Francisco J.; Oblanca, Noelia; Rebolleda, Gema

2018-01-01

Purpose To study the structure-function relationship in glaucoma and healthy patients assessed with Spectralis OCT and Humphrey perimetry using new statistical approaches. Materials and Methods Eighty-five eyes were prospectively selected and divided into 2 groups: glaucoma (44) and healthy patients (41). Three different statistical approaches were carried out: (1) factor analysis of the threshold sensitivities (dB) (automated perimetry) and the macular thickness (μm) (Spectralis OCT), subsequently applying Pearson's correlation to the obtained regions, (2) nonparametric regression analysis relating the values in each pair of regions that showed significant correlation, and (3) nonparametric spatial regressions using three models designed for the purpose of this study. Results In the glaucoma group, a map that relates structural and functional damage was drawn. The strongest correlation with visual fields was observed in the peripheral nasal region of both superior and inferior hemigrids (r = 0.602 and r = 0.458, resp.). The estimated functions obtained with the nonparametric regressions provided the mean sensitivity that corresponds to each given macular thickness. These functions allowed for accurate characterization of the structure-function relationship. Conclusions Both maps and point-to-point functions obtained linking structure and function damage contribute to a better understanding of this relationship and may help in the future to improve glaucoma diagnosis. PMID:29850196

Mapping Neogene and Quaternary sedimentary deposits in northeastern Brazil by integrating geophysics, remote sensing and geological field data

NASA Astrophysics Data System (ADS)

Andrades-Filho, Clódis de Oliveira; Rossetti, Dilce de Fátima; Bezerra, Francisco Hilario Rego; Medeiros, Walter Eugênio; Valeriano, Márcio de Morisson; Cremon, Édipo Henrique; Oliveira, Roberto Gusmão de

2014-12-01

Neogene and late Quaternary sedimentary deposits corresponding respectively to the Barreiras Formation and Post-Barreiras Sediments are abundant along the Brazilian coast. Such deposits are valuable for reconstructing sea level fluctuations and recording tectonic reactivation along the passive margin of South America. Despite this relevance, much effort remains to be invested in discriminating these units in their various areas of occurrence. The main objective of this work is to develop and test a new methodology for semi-automated mapping of Neogene and late Quaternary sedimentary deposits in northeastern Brazil integrating geophysical and remote sensing data. The central onshore Paraíba Basin was selected due to the recent availability of a detailed map based on the integration of surface and subsurface geological data. We used airborne gamma-ray spectrometry (i.e., potassium-K and thorium-Th concentration) and morphometric data (i.e., relief-dissection, slope and elevation) extracted from the digital elevation model (DEM) generated by the Shuttle Radar Topography Mission (SRTM). The procedures included: (a) data integration using geographic information systems (GIS); (b) exploratory statistical analyses, including the definition of parameters and thresholds for class discrimination for a set of sample plots; and (c) development and application of a decision-tree classification. Data validation was based on: (i) statistical analysis of geochemical and airborne gamma-ray spectrometry data consisting of K and Th concentrations; and (ii) map validation with the support of a confusion matrix, overall accuracy, as well as quantity disagreement and allocation disagreement for accuracy assessment based on field points. The concentration of K successfully separated the sedimentary units of the basin from Precambrian basement rocks. The relief-dissection morphometric variable allowed the discrimination between the Barreiras Formation and the Post-Barreiras Sediments. In addition, two units of the latter (i.e., PB1 and PB2) previously mapped in the field were promptly separated based on Th concentration. A regression analysis indicated that the relationship between geophysical and geochemical values obtained for the PB1, PB2 and Barreiras Formation is significant (R-squared = 0.91; p-value <0.05). Map validation presented a high overall accuracy of 84%, with a coefficient of quantity disagreement of 12% and a coefficient of allocation disagreement of 8%. These results indicate that the methodology applied in the central onshore Paraíba Basin can be successfully used for mapping the Barreiras Formation and Post-Barreiras Sediments in other areas of the Brazilian coast. The ability to rapidly and precisely map these units using such methodology could reveal their geographic distribution along the northeastern coast of Brazil.

Viscous flux flow velocity and stress distribution in the Kim model of a long rectangular slab superconductor

NASA Astrophysics Data System (ADS)

Yang, Yong; Chai, Xueguang

2018-05-01

When a bulk superconductor endures the magnetization process, enormous mechanical stresses are imposed on the bulk, which often leads to cracking. In the present work, we aim to resolve the viscous flux flow velocity υ 0/w, i.e. υ 0 (because w is a constant) and the stress distribution in a long rectangular slab superconductor for the decreasing external magnetic field (B a ) after zero-field cooling (ZFC) and field cooling (FC) using the Kim model and viscous flux flow equation simultaneously. The viscous flux flow velocity υ 0/w and the magnetic field B* at which the body forces point away in all of the slab volumes during B a reduction, are determined by both B a and the decreasing rate (db a /dt) of the external magnetic field normalized by the full penetration field B p . In previous studies, υ 0/w obtained by the Bean model with viscous flux flow is only determined by db a /dt, and the field B* that is derived only from the Kim model is a positive constant when the maximum external magnetic field is chosen. This means that the findings in this paper have more physical contents than the previous results. The field B* < 0 can be kept for any value of B a when the rate db a /dt is greater than a certain value. There is an extreme value for any curve of maximum stress changing with decreasing field B a after ZFC if B* ≤ 0. The effect of db a /dt on the stress is significant in the cases of both ZFC and FC.

The monophasic action potential upstroke: a means of characterizing local conduction.

PubMed

Levine, J H; Moore, E N; Kadish, A H; Guarnieri, T; Spear, J F

1986-11-01

The upstrokes of monophasic action potentials (MAPs) recorded with an extracellular pressure electrode were characterized in isolated canine tissue preparations in vitro. The characteristics of the MAP upstroke were compared with those of the local action potential foot as well as with the characteristics of approaching electrical activation during uniform and asynchronous conduction. The upstroke of the MAP was exponential during uniform conduction. The time constant of rise of the MAP upstroke (TMAP) correlated with that of the action potential foot (Tfoot): TMAP + 1.01 Tfoot + 0.50; r2 = .80. Furthermore, changes in Tfoot with alterations in cycle length were associated with similar changes in TMAP: Tfoot = 1.06 TMAP - 0.11; r2 = .78. In addition, TMAP and Tfoot both deviated from exponential during asynchronous activation; the inflections that developed in the MAP upstroke correlated in time with intracellular action potential upstrokes that were asynchronous in onset in these tissues. Finally, the field of view of the MAP was determined and was found to be dependent in part on tissue architecture and the space constant. Specifically, the field of view of the MAP was found to be greater parallel compared with transverse to fiber orientation (6.02 +/- 1.74 vs 3.03 +/- 1.10 mm; p less than .01). These data suggest that the MAP upstroke may be used to define and characterize local electrical activation. The relatively large field of view of the MAP suggests that this technique may be a sensitive means to record focal membrane phenomena in vivo.

Probing star formation and feedback in dwarf galaxies. Integral field view of the blue compact galaxy Tololo 1937-423

NASA Astrophysics Data System (ADS)

Cairós, L. M.; González-Pérez, J. N.

2017-12-01

Context. Blue compact galaxies (BCG) are gas-rich, low-mass, small systems that form stars at unusually high rates. This makes them excellent laboratories for investigating the process of star-formation (SF) at galactic scales and the effects of massive stellar feedback on the interstellar (and intergalactic) medium. Aims: We analyzed the BCG Tololo 1937-423 using optical integral field spectroscopy to probe its morphology, stellar content, nebular excitation and ionization properties, and the kinematics of its warm ionized gas. Methods: Tololo 1937-423 was observed with the Visible Multi-Object Spectrograph at the Very Large Telescope. We took data in the wavelength range 4150-7400 Å, covering a field of view of 27″× 27″ on the sky with a spatial sampling of 0.̋67. From these data we built maps in the continuum and brighter emission lines, diagnostic line ratio maps, and velocity dispersion fields. We also generated the integrated spectrum of the main H II regions and young stellar clusters to determine reliable physical parameters and oxygen abundances. Results: We found that Tololo 1937-423 is currently undergoing an extended starburst. In the Hα maps we identified nine major clumps, aligned mostly northeast-southwest, and stretching to galactocentric distances ≥2 kpc. The galaxy presents a single continuum peak that is not cospatial with any knot in emission lines, indicating at least two relatively recent episodes of SF. The inhomogeneous dust distribution reachs its maximum (E(B-V) 0.97) roughly at the position of the continuum peak. We found shocked regions in the galaxy outer regions and at the edges of the SF knots. The oxygen abundance, 12 + log(O/H) 8.20 ± 0.1, is similar in all the SF regions, suggesting a chemically homogeneous ionized interstellar medium over spatial scales of several kpc. The ionized gas kinematics displays an overall regular rotation around a northwest-southeast axis, with a maximum velocity of 70 ± 7 km s-1. Conclusions: The morphology of the galaxy and the two different episodes of SF suggest a scenario of triggered (induced by supernova shock waves) SF acting in Tololo 1937-423. The inferred ages for the different SF episodes ( 13-80 Myr for the central post-starburst and 5-7 Myr for the ongoing SF) are consistent with triggered SF, with the most recent SF episode caused by the collective effect of stellar winds and supernova explosions from the central post-starburst. The velocity dispersion pattern, with higher velocity dispersions found at the edges of the SF regions, and shocked regions in the galaxy, also favor this scenario. Based on observations made with ESO Telescopes at Paranal Observatory under programme ID 079.B-0445.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ade, P. A. R.; Aghanim, N.; Arnaud, M.

The quest for a B-mode imprint from primordial gravity waves on the polarization of the cosmic microwave background (CMB) requires the characterization of foreground polarization from Galactic dust. In this paper, we present a statistical study of the filamentary structure of the 353 GHz Planck Stokes maps at high Galactic latitude, relevant to the study of dust emission as a polarized foreground to the CMB. We filter the intensity and polarization maps to isolate filaments in the range of angular scales where the power asymmetry between E-modes and B-modes is observed. Using the Smoothed Hessian Major Axis Filament Finder (SMAFF),more » we identify 259 filaments at high Galactic latitude, with lengths larger or equal to 2° (corresponding to 3.5 pc in length for a typical distance of 100 pc). Thesefilaments show a preferred orientation parallel to the magnetic field projected onto the plane of the sky, derived from their polarization angles. We present mean maps of the filaments in Stokes I, Q, U, E, and B, computed by stacking individual images rotated to align the orientations of the filaments. Combining the stacked images and the histogram of relative orientations, we estimate the mean polarization fraction of the filaments to be 11%. Furthermore, we show that the correlation between the filaments and the magnetic field orientations may account for the E and B asymmetry and the C ℓ TE/C ℓ EE ratio, reported in the power spectra analysis of the Planck353 GHz polarization maps. Finally, future models of the dust foreground for CMB polarization studies will need to take into account the observed correlation between the dust polarization and the structure of interstellar matter.« less

New Mars free-air and Bouguer gravity: Correlation with topography, geology and large impact basins

NASA Technical Reports Server (NTRS)

Frey, Herbert; Bills, Bruce G.; Kiefer, Walter S.; Nerem, R. Steven; Roark, James H.; Zuber, Maria T.

1993-01-01

Free-air and Bouguer gravity anomalies from a 50x50 field (MGM635), derived at the Goddard Space Flight Center, with global topography, geology, and the distribution of large impact basins was compared. The free-air gravity anomalies were derived from re-analysis of Viking Orbiter and Mariner 9 tracking data and have a spatial resolution of 250-300 km. Bouguer anomalies were calculated using a 50x50 expansion of the current Mars topography and the GSFC degree 50 geoid as the equipotential reference surface. Rotational flattening was removed using a moment of inertia of 0.365 and the corrections from Table B2 of Sleep and Phillips. Crustal density and mean density were assumed to be 2.9 and 3.93 gm/cm(sup 3). The spherical harmonic topography used has zero mean elevation, and differs from the USGS maps by about 2 km. Comparisons with global geology use a simplified map with about 1/3 the number of units on the current maps. For correlation with impact basins, the recent compilation by Schultz and Frey was used.

Arctic lead detection using a waveform mixture algorithm from CryoSat-2 data

NASA Astrophysics Data System (ADS)

Lee, Sanggyun; Kim, Hyun-cheol; Im, Jungho

2018-05-01

We propose a waveform mixture algorithm to detect leads from CryoSat-2 data, which is novel and different from the existing threshold-based lead detection methods. The waveform mixture algorithm adopts the concept of spectral mixture analysis, which is widely used in the field of hyperspectral image analysis. This lead detection method was evaluated with high-resolution (250 m) MODIS images and showed comparable and promising performance in detecting leads when compared to the previous methods. The robustness of the proposed approach also lies in the fact that it does not require the rescaling of parameters (i.e., stack standard deviation, stack skewness, stack kurtosis, pulse peakiness, and backscatter σ0), as it directly uses L1B waveform data, unlike the existing threshold-based methods. Monthly lead fraction maps were produced by the waveform mixture algorithm, which shows interannual variability of recent sea ice cover during 2011-2016, excluding the summer season (i.e., June to September). We also compared the lead fraction maps to other lead fraction maps generated from previously published data sets, resulting in similar spatiotemporal patterns.

Improved UTE-based attenuation correction for cranial PET-MR using dynamic magnetic field monitoring

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aitken, A. P.; Giese, D.; Tsoumpas, C.

2014-01-15

Purpose: Ultrashort echo time (UTE) MRI has been proposed as a way to produce segmented attenuation maps for PET, as it provides contrast between bone, air, and soft tissue. However, UTE sequences require samples to be acquired during rapidly changing gradient fields, which makes the resulting images prone to eddy current artifacts. In this work it is demonstrated that this can lead to misclassification of tissues in segmented attenuation maps (AC maps) and that these effects can be corrected for by measuring the true k-space trajectories using a magnetic field camera. Methods: The k-space trajectories during a dual echo UTEmore » sequence were measured using a dynamic magnetic field camera. UTE images were reconstructed using nominal trajectories and again using the measured trajectories. A numerical phantom was used to demonstrate the effect of reconstructing with incorrect trajectories. Images of an ovine leg phantom were reconstructed and segmented and the resulting attenuation maps were compared to a segmented map derived from a CT scan of the same phantom, using the Dice similarity measure. The feasibility of the proposed method was demonstrated inin vivo cranial imaging in five healthy volunteers. Simulated PET data were generated for one volunteer to show the impact of misclassifications on the PET reconstruction. Results: Images of the numerical phantom exhibited blurring and edge artifacts on the bone–tissue and air–tissue interfaces when nominal k-space trajectories were used, leading to misclassification of soft tissue as bone and misclassification of bone as air. Images of the tissue phantom and thein vivo cranial images exhibited the same artifacts. The artifacts were greatly reduced when the measured trajectories were used. For the tissue phantom, the Dice coefficient for bone in MR relative to CT was 0.616 using the nominal trajectories and 0.814 using the measured trajectories. The Dice coefficients for soft tissue were 0.933 and 0.934 for the nominal and measured cases, respectively. For air the corresponding figures were 0.991 and 0.993. Compared to an unattenuated reference image, the mean error in simulated PET uptake in the brain was 9.16% when AC maps derived from nominal trajectories was used, with errors in the SUV{sub max} for simulated lesions in the range of 7.17%–12.19%. Corresponding figures when AC maps derived from measured trajectories were used were 0.34% (mean error) and −0.21% to +1.81% (lesions). Conclusions: Eddy current artifacts in UTE imaging can be corrected for by measuring the true k-space trajectories during a calibration scan and using them in subsequent image reconstructions. This improves the accuracy of segmented PET attenuation maps derived from UTE sequences and subsequent PET reconstruction.« less

Properties of the statpac visual field index.

PubMed

Artes, Paul H; O'Leary, Neil; Hutchison, Donna M; Heckler, Lisa; Sharpe, Glen P; Nicolela, Marcelo T; Chauhan, Balwantray C

2011-06-08

Purpose. To compare the properties of the visual field index (VFI) to those of mean deviation (MD) in patients with glaucoma. Methods. MD and VFI were calculated in data obtained from an ongoing longitudinal study in which patients with glaucoma (N = 109, 204 eyes) were observed for 9.8 years (median, 21 tests) with static automated perimetry. MD and VFI were compared in one test of each eye, and a subset of 30 tests were selected to compare the VFI with the judgments of eight experts who judged the percentage of the remaining visual field. In series of tests obtained over time, rates of change, statistical significance, evidence of nonlinearity, and variability were compared between both indices. Results. In single tests, MD and VFI were closely related (r = 0.88, P < 0.001). The relationship between both indices appeared linear, except in visual fields with MDs better than -5.0 dB where 29 (22%) of 129 eyes exhibited a ceiling effect (VFI = 100%). Based on this relationship, the predicted VFIs for visual fields with MDs of -5, -10, and -15 dB were 91%, 76%, and 60%, respectively. The percentage of remaining visual field suggested by the VFI exceeded the range of the experts' subjective judgments in 16 (53%) of 30 eyes. In series of tests obtained over time, rates of change with the two indices were closely related (r = 0.79, P < 0.001), and statistically significant reductions over time (P < 0.05) occurred in a similar number of eyes (92 [45%] with MD, and 87 [43%] with VFI). Of the 105 eyes with statistically significant (P < 0.05) negative trend in either MD or VFI, 74 (70%) showed such trends with both indices (κ = 0.69). The variability of MD and VFI increased with damage, and there was no evidence that change over time was more linear with VFI than with MD. Conclusions. The VFI provides a simple and understandable metric of visual field damage, but its estimates of remaining visual field were more optimistic than those of the experts. Rates of change over time with both indices were closely related, but the reliance of the VFI on pattern deviation probability maps caused a ceiling effect that may have reduced its sensitivity to change in eyes with early damage. In this group of patients there was no evidence to suggest that the VFI is either superior or inferior to the MD as a summary measure of visual field damage.

Theoretical Prediction of the Heats of Formation, Densities, and Relative Sensitivities for 5,7-dinitro-5,7-diaza-1,3-dioxabicyclo (3:3:0)octan-2-one

DTIC Science & Technology

2016-04-01

dioxabicyclo(3:3:0)octan-2-one molecule .............................................1 Fig. 2 Electrostatic potential map of 5,7-dinitro-5,7-diaza-1,3...the impact sensitivities, the electrostatic maps on the 0.001 isosurfaces were generated with the scalar range of the electrostatic surface potential... Electrostatic potential map of 5,7-dinitro-5,7-diaza-1,3-dioxabicyclo(3:3:0)octan-2- one, a) with and b-c) without molecule overlay. Image c) shows the opposite

The Optical Gravitational Lensing Experiment. BVI Maps of Dense Stellar Regions. III. The Galactic Bulge

NASA Astrophysics Data System (ADS)

Udalski, A.; Szymanski, M.; Kubiak, M.; Pietrzynski, G.; Soszynski, I.; Wozniak, P.; Zebrun, K.; Szewczyk, O.; Wyrzykowski, L.

2002-09-01

We present the VI photometric maps of the Galactic bulge. They contain VI photometry and astrometry of about 30 million stars from 49 fields of 0.225 square degree each in the Galactic center region. The data were collected during the second phase of the OGLE microlensing project. We discuss the accuracy of data and present color-magnitude diagrams of selected fields observed by OGLE in the Galactic bulge. The VI maps of the Galactic bulge are accessible electronically for the astronomical community from the OGLE Internet archive.

Combating Conflict Related Sexual Violence: More Than a Stability Concern

DTIC Science & Technology

2014-06-13

violence can cause serious bodily harm or mental harm to members of the group (International Criminal Court 2002, 3; Ellis 2007). Under crimes against...population was subjugated to Japanese 46 rule and were provided with horrific visual, physical, and emotional reminders of the futility of any...maps.google.com/ maps /ms?msid=214870171076954118166.0004b9bcb533b0ee2c1f8&msa=0&ie= UTF8&ll=12.848235,58.136902&spn=43.135476,135.258178&t=m&output=em bed

Simulating the large-scale structure of HI intensity maps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Seehars, Sebastian; Paranjape, Aseem; Witzemann, Amadeus

Intensity mapping of neutral hydrogen (HI) is a promising observational probe of cosmology and large-scale structure. We present wide field simulations of HI intensity maps based on N-body simulations of a 2.6 Gpc / h box with 2048{sup 3} particles (particle mass 1.6 × 10{sup 11} M{sub ⊙} / h). Using a conditional mass function to populate the simulated dark matter density field with halos below the mass resolution of the simulation (10{sup 8} M{sub ⊙} / h < M{sub halo} < 10{sup 13} M{sub ⊙} / h), we assign HI to those halos according to a phenomenological halo to HI mass relation. The simulations span a redshift range of 0.35 ∼< z ∼< 0.9 in redshift bins of width Δ z ≈ 0.05 andmore » cover a quarter of the sky at an angular resolution of about 7'. We use the simulated intensity maps to study the impact of non-linear effects and redshift space distortions on the angular clustering of HI. Focusing on the autocorrelations of the maps, we apply and compare several estimators for the angular power spectrum and its covariance. We verify that these estimators agree with analytic predictions on large scales and study the validity of approximations based on Gaussian random fields, particularly in the context of the covariance. We discuss how our results and the simulated maps can be useful for planning and interpreting future HI intensity mapping surveys.« less

Application of digital soil mapping in Argentina: An example using apparent soil electrical conductivity

NASA Astrophysics Data System (ADS)

Domenech, Marisa; Castro Franco, Mauricio; Costa, Jose Luis; Aparicio, Virginia

2017-04-01

Apparent soil electrical conductivity (ECa) has been used to capture soil data in several Argentinean Pampas locations. The aim of this study was to generate digital soil mapping on the basis of understanding the relation among ECa and soil properties in three farming fields of the southeast Buenos Aires province. We carried out a geostatistical analysis using ECa data obtained at two depths 0-30cm (ECa_30cm) and 0-90cm (ECa_90cm). Then, two zones derived from ECa measurements were delimited in each field. A soil-sampling scheme was applied in each zone using two depths: 0-30cm and 30-90cm. Texture, Organic Matter Content (OMC), cation-exchange capacity (CEC), pH, saturated paste electrical conductivity (ECe) and effective depth were analyzed. The relation between zones and soil properties were studied using nested factor ANOVA. Our results indicated that clay content and effective depth showed significant differences among ECa_30 zones in all fields. In Argentine Pampas, the presence of petrocalcic horizons limits the effective soil depth at field scale. These horizons vary in depth, structure, hardness and carbonates content. In addition, they influence the spatial pattern of clay content. The relation among other physical and chemical soil properties was not consistent. Two soil unit maps were delimited in each field. These results might support irrigation management due to clay content and effective depth would be controlling soil water storage. Our findings highlight the high accuracy use of soil sensors in developing digital soil mapping at field scale, irrigation management zones, precision agriculture and hydrological modeling in Pampas region conditions.

Optical mapping of Langendorff-perfused human hearts: establishing a model for the study of ventricular fibrillation in humans.

PubMed

Nanthakumar, Kumaraswamy; Jalife, José; Massé, Stéphane; Downar, Eugene; Pop, Mihaela; Asta, John; Ross, Heather; Rao, Vivek; Mironov, Sergey; Sevaptsidis, Elias; Rogers, Jack; Wright, Graham; Dhopeshwarkar, Rajesh

2007-07-01

Our objective was to establish a novel model for the study of ventricular fibrillation (VF) in humans. We adopted the established techniques of optical mapping to human ventricles for the first time to determine whether human VF is the result of wave breaks and singularity point formation and is maintained by high-frequency rotors and fibrillatory conduction. We describe the technique of acquiring optical signals in human hearts during VF, their characteristics, and the feasibility of possible analyses that could be performed to elucidate mechanisms of human VF. We used explanted hearts from five cardiomyopathic patients who underwent transplantation. The hearts were Langendorff perfused with Tyrode solution (95% O(2)-5% CO(2)), and the potentiometric dye di-4-ANEPPS was injected as a bolus into the coronary circulation. Fluorescence was excited at 531 +/- 20 nm with a 150-W halogen light source; the emission signal was long-pass filtered at 610 nm and recorded with a mapping camera. Fractional change of fluorescence varied between 2% and 12%. Average signal-to-noise ratio was 40 dB. The mean velocity of VF wave fronts was 0.25 +/- 0.04 m/s. Submillimetric spatial resolution (0.65-0.85 mm), activation mapping, and transformation of the data to phase-based analysis revealed reentrant, colliding, and fractionating wave fronts in human VF. On many occasions the VF wave fronts were as large as the entire vertical length (8 cm) of the mapping field, suggesting that there are a limited number of wave fronts on the human heart during VF. Phase transformation of the optical signals allowed the first demonstration ever of phase singularity point, wave breaks, and rotor formation in human VF. This method provides opportunities for potential analyses toward elucidation of the mechanisms of VF and defibrillation in humans.

Effect of Two Different Doses of Dexmedetomidine on Stress Response in Laparoscopic Pyeloplasty: A Randomized Prospective Controlled Study.

PubMed

Shamim, Rafat; Srivastava, Shashi; Rastogi, Amit; Kishore, Kamal; Srivastava, Aneesh

2017-01-01

Clonidine, opioids, β-blockers, and dexmedetomidine have been tried to attenuate stress responses during laparoscopic surgery. We evaluated the efficacy of dexmedetomidine in two different doses in attenuating stress responses on patients undergoing laparoscopic pyeloplasty. Ninety patients were assigned to one of the three groups: Group A, Group B, and Group C. Group B received dexmedetomidine 1 mcg/kg as loading dose, followed by 0.7 mcg/kg/h for maintenance; Group C received dexmedetomidine 0.7 mcg/kg as a loading dose, followed by 0.5 mcg/kg/h for maintenance. Group A received normal saline. Stress responses were assessed by the variations in heart rate (HR), mean arterial pressure (MAP), blood glucose levels, and serum cortisol levels. One-way analysis of variance test was applied. Multiple comparisons between groups were done with post hoc Bonferroni test. The HR and MAP were found to be higher in Group A. The difference was statistically significant ( P < 0.05) during intubation, carbon dioxide insufflation, and extubation when compared with Groups B and C. Blood glucose levels at postintubation and at extubation were higher in Group A and statistically significant ( P < 0.05) when compared with Groups B and C. Serum cortisol levels at postintubation, during midsurgery, and 2 h after extubation were higher in Group A and statistically significant ( P < 0.05) when compared with Groups B and C. However, HR, MAP, blood glucose levels, and serum cortisol levels were similar in dexmedetomidine groups. Dexmedetomidine decreases stress response and provides good condition for maintenance of anesthesia. Dexmedetomidine when used in lower dose in Group C decreases stress response comparable to higher dose in Group B.

Theoretical Prediction of the Heats of Formation, Densities, and Relative Sensitivities for 3,7-diamino-2,4,6,8-tetranitro-1,5-diazanaphthalene (DATNP) and 3,7-diamino-2,4,6,8-tetranitro-1,5-diazanaphthalene 1,5-N-oxide (DATNPO)

DTIC Science & Technology

2016-02-01

Figures Fig. 1 Optimized structure of a) 1 and b) 2 ......................................................2 Fig. 2 Electrostatic potential map of 1...3 Electrostatic potential map of 2, without a) and with b) molecule overlay...previous report.7 For the estimation of the impact sensitivities, the electrostatic maps on the 0.001 isosurfaces were generated with the scalar range

Magneto-conductance fingerprints of purely quantum states in the open quantum dot limit

NASA Astrophysics Data System (ADS)

Mendoza, Michel; Ujevic, Sebastian

2012-06-01

We present quantum magneto-conductance simulations, at the quantum low energy condition, to study the open quantum dot limit. The longitudinal conductance G(E,B) of spinless and non-interacting electrons is mapped as a function of the magnetic field B and the energy E of the electrons. The quantum dot linked to the semi-infinite leads is tuned by quantum point contacts of variable width w. We analyze the transition from a quantum wire to an open quantum dot and then to an effective closed system. The transition, as a function of w, occurs in the following sequence: evolution of quasi-Landau levels to Fano resonances and quasi-bound states between the quasi-Landau levels, followed by the formation of crossings that evolve to anti-crossings inside the quasi-Landau level region. After that, Fano resonances are created between the quasi-Landau states with the final generation of resonant tunneling peaks. By comparing the G(E,B) maps, we identify the closed and open-like limits of the system as a function of the applied magnetic field. These results were used to build quantum openness diagrams G(w,B). Also, these maps allow us to determine the w-limit value from which we can qualitatively relate the closed system properties to the open one. The above analysis can be used to identify single spinless particle effects in experimental measurements of the open quantum dot limit.

A new surveillance and response tool: risk map of infected Oncomelania hupensis detected by Loop-mediated isothermal amplification (LAMP) from pooled samples.

PubMed

Tong, Qun-Bo; Chen, Rui; Zhang, Yi; Yang, Guo-Jing; Kumagai, Takashi; Furushima-Shimogawara, Rieko; Lou, Di; Yang, Kun; Wen, Li-Yong; Lu, Shao-Hong; Ohta, Nobuo; Zhou, Xiao-Nong

2015-01-01

Although schistosomiasis remains a serious health problem worldwide, significant achievements in schistosomiasis control has been made in the People's Republic of China. The disease has been eliminated in five out of 12 endemic provinces, and the prevalence in remaining endemic areas is very low and is heading toward elimination. A rapid and sensitive method for monitoring the distribution of infected Oncomelania hupensis is urgently required. We applied a loop-mediated isothermal amplification (LAMP) assay targeting 28S rDNA for the rapid and effective detection of Schistosoma japonicum DNA in infected and prepatent infected O. hupensis snails. The detection limit of the LAMP method was 100 fg of S. japonicum genomic DNA. To promote the application of the approach in the field, the LAMP assay was used to detect infection in pooled samples of field-collected snails. In the pooled sample detection, snails were collected from 28 endemic areas, and 50 snails from each area were pooled based on the maximum pool size estimation, crushed together and DNA was extracted from each pooled sample as template for the LAMP assay. Based on the formula for detection from pooled samples, the proportion of positive pooled samples and the positive proportion of O. hupensis detected by LAMP of Xima village reached 66.67% and 1.33%, while those of Heini, Hongjia, Yangjiang and Huangshan villages were 33.33% and 0.67%, and those of Tuanzhou and Suliao villages were 16.67% and 0.33%, respectively. The remaining 21 monitoring field sites gave negative results. A risk map for the transmission of schistosomiasis was constructed using ArcMap, based on the positive proportion of O. hupensis infected with S. japonicum, as detected by the LAMP assay, which will form a guide for surveillance and response strategies in high risk areas. Copyright © 2014 Elsevier B.V. All rights reserved.

Electric Propulsion Test and Evaluation Methodologies for Plasma in the Environments of Space and Testing (EP TEMPEST)

DTIC Science & Technology

2016-04-14

Swanson AEDC Path 1: Magnetized electron transport impeded across magnetic field lines; transport via electron-particle collisions Path 2*: Electron...T&E (higher pressure, metallic walls) → Impacts stability, performance, plume properties, thruster lifetime Magnetic Field Lines Plasma Plume...Development of T&E Methodologies • Current-Voltage- Magnetic Field (I-V-B) Mapping • Facility Interaction Studies • Background Pressure • Plasma Wall

Radiofrequency Electromagnetic Field Map of Timisoara

NASA Astrophysics Data System (ADS)

Stefu, N.; Solyom, I.; Arama, A.

2015-12-01

There are many electromagnetic field (EMF) sources nowadays acting simultaneously, especially in urban areas, making the theoretical estimation of electromagnetic power at ground level very difficult. This paper reports on EMF maps built with measurements collected in Timisoara, at various radiofrequencies. A grid of 15×15 squares was built (approximate resolution 400m x 400m) and measurements of the average and maximum values of the electric field E, magnetic field H and total power density S at 0.9, 1.8 and 2.4 GHz were collected in every node of the grid. Positions of the nodes in terms of latitude and longitude were also collected. Maps were built presenting the spatial distribution of the measured quantities over Timisoara. Potential influences of EMF on public health are discussed.

CNR considerations for rapid real-time MRI tumor tracking in radiotherapy hybrid devices: Effects of B{sub 0} field strength

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wachowicz, K., E-mail: keith.wachowicz@albertaheal

2016-08-15

Purpose: This work examines the subject of contrast-to-noise ratio (CNR), specifically between tumor and tissue background, and its dependence on the MRI field strength, B{sub 0}. This examination is motivated by the recent interest and developments in MRI/radiotherapy hybrids where real-time imaging can be used to guide treatment beams. The ability to distinguish a tumor from background tissue is of primary importance in this field, and this work seeks to elucidate the complex relationship between the CNR and B{sub 0} that is too often assumed to be purely linear. Methods: Experimentally based models of B{sub 0}-dependant relaxation for various tumormore » and normal tissues from the literature were used in conjunction with signal equations for MR sequences suitable for rapid real-time imaging to develop field-dependent predictions for CNR. These CNR models were developed for liver, lung, breast, glioma, and kidney tumors for spoiled gradient-echo, balanced steady-state free precession (bSSFP), and single-shot half-Fourier fast spin echo sequences. Results: Due to the pattern in which the relaxation properties of tissues are found to vary over B{sub 0} field (specifically the T{sub 1} time), there was always an improved CNR at lower fields compared to linear dependency. Further, in some tumor sites, the CNR at lower fields was found to be comparable to, or sometimes higher than those at higher fields (i.e., bSSFP CNR for glioma, kidney, and liver tumors). Conclusions: In terms of CNR, lower B{sub 0} fields have been shown to perform as well or better than higher fields for some tumor sites due to superior T{sub 1} contrast. In other sites this effect was less pronounced, reversing the CNR advantage. This complex relationship between CNR and B{sub 0} reveals both low and high magnetic fields as viable options for tumor tracking in MRI/radiotherapy hybrids.« less

Complete Bouguer gravity anomaly map of the state of Colorado

USGS Publications Warehouse

Abrams, Gerda A.

1993-01-01

The Bouguer gravity anomaly map is part of a folio of maps of Colorado cosponsored by the National Mineral Resources Assessment Program (NAMRAP) and the National Geologic Mapping Program (COGEOMAP) and was produced to assist in studies of the mineral resource potential and tectonic setting of the State. Previous compilations of about 12,000 gravity stations by Behrendt and Bajwa (1974a,b) are updated by this map. The data was reduced at a 2.67 g/cm3 and the grid contoured at 3 mGal intervals. This map will aid in the mineral resource assessment by indicating buried intrusive complexes, volcanic fields, major faults and shear zones, and sedimentary basins; helping to identify concealed geologic units; and identifying localities that might be hydrothermically altered or mineralized.

AzTEC half square degree survey of the SHADES fields - I. Maps, catalogues and source counts

NASA Astrophysics Data System (ADS)

Austermann, J. E.; Dunlop, J. S.; Perera, T. A.; Scott, K. S.; Wilson, G. W.; Aretxaga, I.; Hughes, D. H.; Almaini, O.; Chapin, E. L.; Chapman, S. C.; Cirasuolo, M.; Clements, D. L.; Coppin, K. E. K.; Dunne, L.; Dye, S.; Eales, S. A.; Egami, E.; Farrah, D.; Ferrusca, D.; Flynn, S.; Haig, D.; Halpern, M.; Ibar, E.; Ivison, R. J.; van Kampen, E.; Kang, Y.; Kim, S.; Lacey, C.; Lowenthal, J. D.; Mauskopf, P. D.; McLure, R. J.; Mortier, A. M. J.; Negrello, M.; Oliver, S.; Peacock, J. A.; Pope, A.; Rawlings, S.; Rieke, G.; Roseboom, I.; Rowan-Robinson, M.; Scott, D.; Serjeant, S.; Smail, I.; Swinbank, A. M.; Stevens, J. A.; Velazquez, M.; Wagg, J.; Yun, M. S.

2010-01-01

We present the first results from the largest deep extragalactic mm-wavelength survey undertaken to date. These results are derived from maps covering over 0.7deg2, made at λ = 1.1mm, using the AzTEC continuum camera mounted on the James Clerk Maxwell Telescope. The maps were made in the two fields originally targeted at λ = 850μm with the Submillimetre Common-User Bolometer Array (SCUBA) in the SCUBA Half-Degree Extragalactic Survey (SHADES) project, namely the Lockman Hole East (mapped to a depth of 0.9-1.3 mJy rms) and the Subaru/XMM-Newton Deep Field (mapped to a depth of 1.0-1.7 mJy rms). The wealth of existing and forthcoming deep multifrequency data in these two fields will allow the bright mm source population revealed by these new wide-area 1.1mm images to be explored in detail in subsequent papers. Here, we present the maps themselves, a catalogue of 114 high-significance submillimetre galaxy detections, and a thorough statistical analysis leading to the most robust determination to date of the 1.1mm source number counts. These new maps, covering an area nearly three times greater than the SCUBA SHADES maps, currently provide the largest sample of cosmological volumes of the high-redshift Universe in the mm or sub-mm. Through careful comparison, we find that both the Cosmic Evolution Survey (COSMOS) and the Great Observatories Origins Deep Survey (GOODS) North fields, also imaged with AzTEC, contain an excess of mm sources over the new 1.1mm source-count baseline established here. In particular, our new AzTEC/SHADES results indicate that very luminous high-redshift dust enshrouded starbursts (S1.1mm > 3mJy) are 25-50 per cent less common than would have been inferred from these smaller surveys, thus highlighting the potential roles of cosmic variance and clustering in such measurements. We compare number count predictions from recent models of the evolving mm/sub-mm source population to these sub-mm bright galaxy surveys, which provide important constraints for the ongoing refinement of semi-analytic and hydrodynamical models of galaxy formation, and find that all available models overpredict the number of bright submillimetre galaxies found in this survey.

Deductive Sensemaking Principles Using Personal Constructs of the Field Commanders

DTIC Science & Technology

2007-06-01

unclassified b . ABSTRACT unclassified c. THIS PAGE unclassified ABSTRACT The virtue of defining and measuring the commander’s performance solely...seeing the world in which he lives; ( b ) the individual builds constructs and tries them on evolving contexts; (c) the construct can be applied to...ability to (a) anticipate future state of nature; ( b ) cope with state changing in the battlefield; and (c) replicate past experiences and map them into

Live cell refractometry using Hilbert phase microscopy and confocal reflectance microscopy.

PubMed

Lue, Niyom; Choi, Wonshik; Popescu, Gabriel; Yaqoob, Zahid; Badizadegan, Kamran; Dasari, Ramachandra R; Feld, Michael S

2009-11-26

Quantitative chemical analysis has served as a useful tool for understanding cellular metabolisms in biology. Among many physical properties used in chemical analysis, refractive index in particular has provided molecular concentration that is an important indicator for biological activities. In this report, we present a method of extracting full-field refractive index maps of live cells in their native states. We first record full-field optical thickness maps of living cells by Hilbert phase microscopy and then acquire physical thickness maps of the same cells using a custom-built confocal reflectance microscope. Full-field and axially averaged refractive index maps are acquired from the ratio of optical thickness to physical thickness. The accuracy of the axially averaged index measurement is 0.002. This approach can provide novel biological assays of label-free living cells in situ.

Live Cell Refractometry Using Hilbert Phase Microscopy and Confocal Reflectance Microscopy†

PubMed Central

Lue, Niyom; Choi, Wonshik; Popescu, Gabriel; Yaqoob, Zahid; Badizadegan, Kamran; Dasari, Ramachandra R.; Feld, Michael S.

2010-01-01

Quantitative chemical analysis has served as a useful tool for understanding cellular metabolisms in biology. Among many physical properties used in chemical analysis, refractive index in particular has provided molecular concentration that is an important indicator for biological activities. In this report, we present a method of extracting full-field refractive index maps of live cells in their native states. We first record full-field optical thickness maps of living cells by Hilbert phase microscopy and then acquire physical thickness maps of the same cells using a custom-built confocal reflectance microscope. Full-field and axially averaged refractive index maps are acquired from the ratio of optical thickness to physical thickness. The accuracy of the axially averaged index measurement is 0.002. This approach can provide novel biological assays of label-free living cells in situ. PMID:19803506

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fogh, Ellen; Toft-Petersen, Rasmus; Ressouche, Eric

Here, the magnetic phase diagram of magnetoelectric LiCoPO 4 is established using neutron diffraction and magnetometry in fields up to 25.9T applied along the crystallographic b axis. For fields greater than 11.9T, the magnetic unit cell triples in size with propagation vector Q = (0,1/3,0). A magnetized elliptic cycloid is formed with spins in the (b,c) plane and the major axis oriented along b. Such a structure allows for the magnetoelectric effect with an electric polarization along c induced by magnetic fields applied along b. Intriguingly, additional ordering vectors Q ≈ (0,1/4,0) and Q ≈ (0,1/2,0) appear for increasing fieldsmore » in the hysteresis region below the transition field. Traces of this behavior are also observed in the magnetization. A simple model based on a mean-field approach is proposed to explain these additional ordering vectors. In the field interval 20.5–21.0T, the propagation vector Q = (0,1/3,0) remains but the spins orient differently compared to the cycloid phase. Furthermore, above 21.0T and up until saturation, a commensurate magnetic structure exists with a ferromagnetic component along b and an antiferromagnetic component along« less

QTL mapping of selenium content using a RIL population in wheat

PubMed Central

Wang, Pei; Wang, Huinan; Liu, Qing; Tian, Xia; Shi, Yanxi

2017-01-01

Selenium (Se) is an essential trace element that plays various roles in human health. Understanding the genetic control of Se content and quantitative trait loci (QTL) mapping provide a basis for Se biofortification of wheat to enhance grain Se content. In the present study, a set of recombinant inbred lines (RILs) derived from two Chinese winter wheat varieties (Tainong18 and Linmai6) was used to detect QTLs for Se content in hydroponic and field trials. In total, 16 QTLs for six Se content-related traits were detected on eight chromosomes, 1B, 2B, 4B, 5A, 5B, 5D, 6A, and 7D. Of these, seven QTLs were detected at the seedling stage and nine at the adult stage. The contribution of each QTL to Se content ranged from 7.37% to 20.22%. QSsece-7D.2, located between marker loci D-3033829 and D-1668160, had the highest contribution (20.22%). This study helps in understanding the genetic basis for Se contents and will provide a basis for gene mapping of Se content in wheat. PMID:28880898

Mapping the stability field of Jupiter Trojans

NASA Technical Reports Server (NTRS)

Levison, H. F.; Shoemaker, E. M.; Wolfe, R. F.

1991-01-01

Jupiter Trojans are a remnant of outer solar system planetesimals captured into stable or quasistable libration about the 1:1 resonance with the mean motion of Jupiter. The observed swarms of Trojans may provide insight into the original mass of condensed solids in the zone from which the Jovian planets accumulated, provided that the mechanisms of capture can be understood. As the first step toward this understanding, the stability field of Trojans were mapped in the coordinate proper eccentricity, e(sub p), and libration amplitude, D. To accomplish this mapping, the orbits of 100 particles with e(sub p) in the range of 0 to 0.8 and D in the range 0 to 140 deg were numerically integrated. Orbits of the Sun, the four Jovian planets, and the massless particles were integrated as a full N-body system, in a barycentric frame using fourth order symplectic scheme.

Frequency Mapping of Rat Spinal Cord at 7T

NASA Astrophysics Data System (ADS)

Chen, Evan; Rauscher, Alexander; Kozlowski, Piotr; Yung, Andrew

2012-10-01

The spinal cord is an integral part of the nervous system responsible for sensory, motor, and reflex control crucial to all bodily function. Due to its non-invasive nature, MRI is well matched for characterizing and imaging of spinal cord, and is used extensively for clinical applications. Recent developments in magnetic resonance imaging (MRI) at high field (7T) using phase represents a new approach of characterizing spinal cord myelin. Theory suggests that microstructure differences in myelinated white matter (WM) and non-myelinated gray matter (GM) affect MR phase, measurable frequency shifts. Data from pilot experiments using a multi-gradient echo (MGE) sequence to image rat spinal cords placed parallel to main magnetic field B0 has shown frequency shifts between not only between WM and GM, but also between specific WM tracts of the dorsal column, including the fasciculus gracilis, fasciculus cuneatus, and corticospinal tract. Using MGE, frequency maps at multiple echo times (TE) between 4ms and 22ms show a non-linear relationship between WM frequency, contrary to what was previously expected. These results demonstrate the effectiveness of MGE in revealing new information about spinal cord tissue microstructure, and lays important groundwork for in-vivo and human studies.

Troposphere Delay Raytracing Applied in VLBI Analysis

NASA Astrophysics Data System (ADS)

Eriksson, David; MacMillan, Daniel; Gipson, John

2014-12-01

Tropospheric delay modeling error is one of the largest sources of error in VLBI analysis. For standard operational solutions, we use the VMF1 elevation-dependent mapping functions derived from European Centre for Medium Range Forecasting (ECMWF) data. These mapping functions assume that tropospheric delay at a site is azimuthally symmetric. As this assumption does not reflect reality, we have instead determined the raytrace delay along the signal path through the three-dimensional troposphere refractivity field for each VLBI quasar observation. We calculated the troposphere refractivity fields from the pressure, temperature, specific humidity, and geopotential height fields of the NASA GSFC GEOS-5 numerical weather model. We discuss results using raytrace delay in the analysis of the CONT11 R&D sessions. When applied in VLBI analysis, baseline length repeatabilities were better for 70% of baselines with raytraced delays than with VMF1 mapping functions. Vertical repeatabilities were better for 2/3 of all stations. The reference frame scale bias error was 0.02 ppb for raytracing versus 0.08 ppb and 0.06 ppb for VMF1 and NMF, respectively.

Developing a regional canopy fuels assessment strategy using multi-scale lidar

USGS Publications Warehouse

Peterson, Birgit E.; Nelson, Kurtis

2011-01-01

Accurate assessments of canopy fuels are needed by fire scientists to understand fire behavior and to predict future fire occurrence. A key descriptor for canopy fuels is canopy bulk density (CBD). CBD is closely linked to the structure of the canopy; therefore, lidar measurements are particularly well suited to assessments of CBD. LANDFIRE scientists are exploring methods to integrate airborne and spaceborne lidar datasets into a national mapping effort. In this study, airborne lidar, spaceborne lidar, and field data are used to map CBD in the Yukon Flats Ecoregion, with the airborne lidar serving as a bridge between the field data and the spaceborne observations. The field-based CBD was positively correlated with airborne lidar observations (R2=0.78). Mapped values of CBD using the airborne lidar dataset were significantly correlated with spaceborne lidar observations when analyzed by forest type (R2=0.62, evergreen and R2=0.71, mixed). Though continued research is necessary to validate these results, they do support the feasibility of airborne and, most importantly, spaceborne lidar data for canopy fuels assessment.

40 CFR 180.593 - Etoxazole; tolerances for residues.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Papaya 0.20 Pepper/eggplant subgroup 8-10B 0.20 Peppermint, oil 20 Peppermint, tops 10 Pistachio 0.01..., forage 0.80 Corn, field, grain 0.01 Corn, field, refined oil 0.03 Corn, field, stover 4.0 Corn, pop... Sheep, liver 0.01 Spearmint, oil 20 Spearmint, tops 10 Squash/cucumber subgroup 9B 0.02 Star apple 0.20...

40 CFR 180.593 - Etoxazole; tolerances for residues.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Papaya 0.20 Pepper/eggplant subgroup 8-10B 0.20 Peppermint, oil 20 Peppermint, tops 10 Pistachio 0.01..., forage 0.80 Corn, field, grain 0.01 Corn, field, refined oil 0.03 Corn, field, stover 4.0 Corn, pop... Sheep, liver 0.01 Spearmint, oil 20 Spearmint, tops 10 Squash/cucumber subgroup 9B 0.02 Star apple 0.20...

Identification of land degradation evidences in an organic farm using probability maps (Croatia)

NASA Astrophysics Data System (ADS)

Pereira, Paulo; Bogunovic, Igor; Estebaranz, Ferran

2017-04-01

Land degradation is a biophysical process with important impacts on society, economy and policy. Areas affected by land degradation do not provide services in quality and with capacity to full-field the communities that depends on them (Amaya-Romero et al., 2015; Beyene, 2015; Lanckriet et al., 2015). Agricultural activities are one of the main causes of land degradation (Kraaijvanger and Veldkamp, 2015), especially when they decrease soil organic matter (SOM), a crucial element for soil fertility. In temperate areas, the critical level of SOM concentration in agricultural soils is 3.4%. Below this level there is a potential decrease of soil quality (Loveland and Weeb, 2003). However, no previous work was carried out in other environments, such as the Mediterranean. The spatial distribution of potential degraded land is important to be identified and mapped, in order to identify the areas that need restoration (Brevik et al., 2016; Pereira et al., 2017). The aim of this work is to assess the spatial distribution of areas with evidences of land degradation (SOM bellow 3.4%) using probability maps in an organic farm located in Croatia. In order to find the best method, we compared several probability methods, such as Ordinary Kriging (OK), Simple Kriging (SK), Universal Kriging (UK), Indicator Kriging (IK), Probability Kriging (PK) and Disjunctive Kriging (DK). The study area is located on the Istria peninsula (45°3' N; 14°2' E), with a total area of 182 ha. One hundred eighty-two soil samples (0-30 cm) were collected during July of 2015 and SOM was assessed using wet combustion procedure. The assessment of the best probability method was carried out using leave one out cross validation method. The probability method with the lowest Root Mean Squared Error (RMSE) was the most accurate. The results showed that the best method to predict the probability of potential land degradation was SK with an RMSE of 0.635, followed by DK (RMSE=0.636), UK (RMSE=0.660), OK (RMSE=0.660), IK (RMSE=0.722) and PK (RMSE=1.661). According to the most accurate method, it is observed that the majority of the area studied has a high probability to be degraded. Measures are needed to restore this area. References Amaya-Romero, M., Abd-Elmabod, S., Munoz-Rojas, M., Castellano, G., Ceacero, C., Alvarez, S., Mendez, M., De la Rosa, D. (2015) Evaluating soil threats under climate change scenarios in the Andalusia region, Southern Spain. Land Degradation and Development, 26, 441-449. Beyene, F. (2015) Incentives and challenges in community based rangeland management: Evidence from Eastern Ethiopia. Land Degradation and Development, 26, 502-509. Brevik, E., Calzolari, C., Miller, B., Pereira, P., Kabala, C., Baumgarten, A., Jordán, A. (2016) Historical perspectives and future needs in soil mapping, classification and pedological modelling, Geoderma, 264, Part B, 256-274. Kraaijvanger, R., Veldkamp, T. (2015) Grain productivity, fertilizer response and nutrient balance of farming systems in Tigray, Ethiopia: A Multiprespective view in relation do soil fertility degradation. Land Degradation and Development, 26, 701-710. Lanckriet, S., Derudder, B., Naudts, J., Bauer, H., Deckers, J., Haile, M., Nyssen, J. (2015) A political ecology perspective of land degradation in the North Ethiopian Highlands. Land Degradation and Development, 26, 521-530. Loveland, P., Weeb, J. (2003) Is there a critical level of organic matter in the agricultural soils of temperate regions: a review. Soil & Tillage Research, 70, 1-18. Pereira, P., Brevik, E., Munoz-Rojas, M., Miller, B., Smetanova, A., Depellegrin, D., Misiune, I., Novara, A., Cerda, A. Soil mapping and process modelling for sustainable land management. In: Pereira, P., Brevik, E., Munoz-Rojas, M., Miller, B. (Eds.) Soil mapping and process modelling for sustainable land use management (Elsevier Publishing House) ISBN: 9780128052006

Stress field modeling of the Carpathian Basin based on compiled tectonic maps

NASA Astrophysics Data System (ADS)

Albert, Gáspár; Ungvári, Zsuzsanna; Szentpéteri, Krisztián

2014-05-01

The estimation of the stress field in the Carpathian Basin is tackled by several authors. Their modeling methods usually based on measurements (borehole-, focal mechanism- and geodesic data) and the result is a possible structural pattern of the region. Our method works indirectly: the analysis is aimed to project a possible 2D stress field over the already mapped/known/compiled lineament pattern. This includes a component-wise interpolation of the tensor-field, which is based on the generated irregular point cloud in the puffer zone of the mapped lineaments. The interpolated values appear on contour and tensor maps, and show the relative stress field of the area. In 2006 Horváth et al. compiled the 'Atlas of the present-day geodynamics of the Pannonian basin'. To test our method we processed the lineaments of the 1:1 500 000 scale 'Map of neotectonic (active) structures' published in this atlas. The geodynamic parameters (i.e. normal, reverse, right- and left lateral strike-slip faults, etc.) of the lines on this map were mostly explained in the legend. We classified the linear elements according to these parameters and created a geo-referenced mapping database. This database contains the polyline sections of the map lineaments as vectors (i.e. line sections), and the directions of the stress field as attributes of these vectors. The directions of the dip-parallel-, strike-parallel- and vertical stress-vectors are calculated from the geodynamical parameters of the line section. Since we created relative stress field properties, the eigenvalues of the vectors were maximized to one. Each point in the point cloud inherits the stress property of the line section, from which it was derived. During the modeling we tried several point-cloud generating- and interpolation methods. The analysis of the interpolated tensor fields revealed that the model was able to reproduce a geodynamic synthesis of the Carpathian Basin, which can be correlated with the synthesis of the Atlas published in 2006. The method was primarily aimed to reconstruct paleo-stress fields. References Horváth, F., Bada, G., Windhoffer, G., Csontos, L., Dombrádi, E., Dövényi, P., Fodor, L., Grenerczy, G., Síkhegyi, F., Szafián, P., Székely, B., Timár, G., Tóth, L., Tóth, T. 2006: Atlas of the present-day geodynamics of the Pannonian basin: Euroconform maps with explanatory text. Magyar Geofizika 47, 133-137.

VizieR Online Data Catalog: Gould's Belt VLA survey. III. Orion region (Kounkel+, 2014)

NASA Astrophysics Data System (ADS)

Kounkel, M.; Hartmann, L.; Loinard, L.; Mioduszewski, A. J.; Dzib, S. A.; Ortiz-Leon, G. N.; Rodriguez, L. F.; Pech, G.; Rivera, J. L.; Torres, R. M.; Boden, A. F.; Evans, N. J., II; Briceno, C.; Tobin, J.

2015-09-01

Fields in the Orion A and B molecular clouds were observed with the Karl G. Jansky Very Large Array (VLA) in its A configuration. The 210 individual fields have been split into 7 maps, with 30 fields being observed per map, as follows: 12 in λ Ori, 3 in L1622, 27 are shared between NGC 2068 and NGC 2071, 14 are shared between NGC 2023 and NGC 2024, 11 in σ Ori, 109 in the Orion Nebula Cluster (ONC), 16 in L1641-N, 8 in L1641-C, and 10 in L1641-S (see Figures 1-7). All the maps were imaged closely in time, and a total of three epochs separated by approximately a full month were acquired in summer 2011. Assuming a FWHM diameter of the primary beam of 10' and 6' at 4.5 and 7.5GHz respectively, the total area covered by our observations is 2.26 and 1.35deg2, respectively. (2 data files).

Structure-contour maps on the top of the Mississippian carbonates and on top of the upper Cambrian and lower Ordovician Arbuckle Group, Joplin 1 degree by 2 degrees Quadrangle, Kansas and Missouri

USGS Publications Warehouse

Blair, Kevin P.; Berendsen, Pieter; Seeger, Cheryl M.

1992-01-01

This publication is a part of the folio of maps of the Joplin 1° X 2° quadrangle, Kansas and Missouri, which was prepared under the Conterminuous United States Mineral Assessment Program. Other publications in this folio to date include the U.S. Geological Survey Miscellaneous Field Studies Maps MF-2125-A and B (Erickson and others, 1990; Grisafe and Rueff, 1992). Additional maps showing other geologic aspects of the Joplin quadrangle will be published as U.S. Geological Survey maps bearing this same serial number with different letter suffixes (MF-2125-D, -E, and so forth).

Metropolitan Spokane Region Water Resources Study. Appendix B. Geology and Groundwater

DTIC Science & Technology

1976-01-01

to develop and confirm map data. Engineering Geology. Large-scale (1:24,000) mapping of near- surface soil classification and drainage characteristics...of the great lava field. By the beginning of the Pleistocene Ice Age, a broad valley had developed at about 1600 feet altitude. This pre-glacial...has developed on re level basalt surfaces. In the southern and eastern portions of the study area, chemical alteration has caused deep decomposition

New constraints on modelling the random magnetic field of the MW

NASA Astrophysics Data System (ADS)

Beck, Marcus C.; Beck, Alexander M.; Beck, Rainer; Dolag, Klaus; Strong, Andrew W.; Nielaba, Peter

2016-05-01

We extend the description of the isotropic and anisotropic random component of the small-scale magnetic field within the existing magnetic field model of the Milky Way from Jansson & Farrar, by including random realizations of the small-scale component. Using a magnetic-field power spectrum with Gaussian random fields, the NE2001 model for the thermal electrons and the Galactic cosmic-ray electron distribution from the current GALPROP model we derive full-sky maps for the total and polarized synchrotron intensity as well as the Faraday rotation-measure distribution. While previous work assumed that small-scale fluctuations average out along the line-of-sight or which only computed ensemble averages of random fields, we show that these fluctuations need to be carefully taken into account. Comparing with observational data we obtain not only good agreement with 408 MHz total and WMAP7 22 GHz polarized intensity emission maps, but also an improved agreement with Galactic foreground rotation-measure maps and power spectra, whose amplitude and shape strongly depend on the parameters of the random field. We demonstrate that a correlation length of 0≈22 pc (05 pc being a 5σ lower limit) is needed to match the slope of the observed power spectrum of Galactic foreground rotation-measure maps. Using multiple realizations allows us also to infer errors on individual observables. We find that previously-used amplitudes for random and anisotropic random magnetic field components need to be rescaled by factors of ≈0.3 and 0.6 to account for the new small-scale contributions. Our model predicts a rotation measure of -2.8±7.1 rad/m2 and 04.4±11. rad/m2 for the north and south Galactic poles respectively, in good agreement with observations. Applying our model to deflections of ultra-high-energy cosmic rays we infer a mean deflection of ≈3.5±1.1 degree for 60 EeV protons arriving from CenA.

Alteration Map Showing Major Faults and Veins and Associated Water-Quality Signatures of the Animas River Watershed Headwaters Near Silverton, Southwest Colorado

USGS Publications Warehouse

Bove, Dana J.; Yager, Douglas B.; Mast, M. Alisa; Dalton, J. Brad

2007-01-01

This map was produced to provide hard-copy and digital data for alteration assemblages in the historical mining area centered on the Tertiary San Juan and Silverton calderas. The data have direct application to geoenvironmental and mineral exploration objectives. This dataset represents alteration mapping for the upper Animas River watershed near Silverton, Colorado. The map is based on detailed 1:12,000-scale field mapping, X-ray diffraction (XRD) analysis, mineral mapping by remote sensing (AVIRIS) data, and 1:24,000-scale aerial photographic interpretation. Geologic structures were compiled and generalized from multiple published and unpublished sources (Burbank and Luedke, 1964; Steven and others, 1974; Luedke and Burbank 1975a, b; Lipman, 1976; Luedke and Burbank, 1987; Luedke, 1996) (see Index Map). Unpublished mapping of the Ironton quadrangle by D.J. Bove and J.P. Kurtz in 1997-1999 was included.

Galactic synchrotron radiation from radio to microwaves, and its relation to cosmic-ray propagation models: past, present and future

NASA Astrophysics Data System (ADS)

Orlando, Elena

2016-04-01

Galactic synchrotron radiation observed from radio to microwaves is produced by cosmic-ray (CR) electrons propagating in magnetic fields (B-fields). The low-frequency foreground component separated maps by WMAP and Planck depend on the assumed synchrotron spectrum. The synchrotron spectrum varies for different line of sights as a result of changes on the CR spectrum due to propagation effects and source distributions. Our present knowledge of the CR spectrum at different locations in the Galaxy is not sufficient to distinguish various possibilities in the modeling. As a consequence uncertainties on synchrotron emission models complicate the foreground component separation analysis with Planck and future microwave telescopes. Hence, any advancement in synchrotron modeling is important for separating the different foreground components.The first step towards a more comprehensive understanding of degeneracy and correlation among the synchrotron model parameters is outlined in our Strong et al. 2011 and Orlando et al. 2013 papers. In the latter the conclusion was that CR spectrum, propagation models, B-fields, and foreground component separation analysis need to be studied simultaneously in order to properly obtain and interpret the synchrotron foreground. Indeed for the officially released Planck maps, we use only the best spectral model from our above paper for the component separation analysis.Here we present a collections of our latest results on synchrotron, CRs and B-fields in the context of CR propagation, showing also our recent work on B-fields within the Planck Collaboration. We underline also the importance of using the constraints on CRs that we obtain from gamma ray observations. Methods and perspectives for further studies on the synchrotron foreground will be addressed.

From Complex B1 Mapping to Local SAR Estimation for Human Brain MR Imaging Using Multi-channel Transceiver Coil at 7T

PubMed Central

Zhang, Xiaotong; Schmitter, Sebastian; Van de Moortel, Pierre-François; Liu, Jiaen

2014-01-01

Elevated Specific Absorption Rate (SAR) associated with increased main magnetic field strength remains as a major safety concern in ultra-high-field (UHF) Magnetic Resonance Imaging (MRI) applications. The calculation of local SAR requires the knowledge of the electric field induced by radiofrequency (RF) excitation, and the local electrical properties of tissues. Since electric field distribution cannot be directly mapped in conventional MR measurements, SAR estimation is usually performed using numerical model-based electromagnetic simulations which, however, are highly time consuming and cannot account for the specific anatomy and tissue properties of the subject undergoing a scan. In the present study, starting from the measurable RF magnetic fields (B1) in MRI, we conducted a series of mathematical deduction to estimate the local, voxel-wise and subject-specific SAR for each single coil element using a multi-channel transceiver array coil. We first evaluated the feasibility of this approach in numerical simulations including two different human head models. We further conducted experimental study in a physical phantom and in two human subjects at 7T using a multi-channel transceiver head coil. Accuracy of the results is discussed in the context of predicting local SAR in the human brain at UHF MRI using multi-channel RF transmission. PMID:23508259

Diagnosing and Mapping Pulmonary Emphysema on X-Ray Projection Images: Incremental Value of Grating-Based X-Ray Dark-Field Imaging

PubMed Central

Meinel, Felix G.; Schwab, Felix; Schleede, Simone; Bech, Martin; Herzen, Julia; Achterhold, Klaus; Auweter, Sigrid; Bamberg, Fabian; Yildirim, Ali Ö.; Bohla, Alexander; Eickelberg, Oliver; Loewen, Rod; Gifford, Martin; Ruth, Ronald; Reiser, Maximilian F.; Pfeiffer, Franz; Nikolaou, Konstantin

2013-01-01

Purpose To assess whether grating-based X-ray dark-field imaging can increase the sensitivity of X-ray projection images in the diagnosis of pulmonary emphysema and allow for a more accurate assessment of emphysema distribution. Materials and Methods Lungs from three mice with pulmonary emphysema and three healthy mice were imaged ex vivo using a laser-driven compact synchrotron X-ray source. Median signal intensities of transmission (T), dark-field (V) and a combined parameter (normalized scatter) were compared between emphysema and control group. To determine the diagnostic value of each parameter in differentiating between healthy and emphysematous lung tissue, a receiver-operating-characteristic (ROC) curve analysis was performed both on a per-pixel and a per-individual basis. Parametric maps of emphysema distribution were generated using transmission, dark-field and normalized scatter signal and correlated with histopathology. Results Transmission values relative to water were higher for emphysematous lungs than for control lungs (1.11 vs. 1.06, p<0.001). There was no difference in median dark-field signal intensities between both groups (0.66 vs. 0.66). Median normalized scatter was significantly lower in the emphysematous lungs compared to controls (4.9 vs. 10.8, p<0.001), and was the best parameter for differentiation of healthy vs. emphysematous lung tissue. In a per-pixel analysis, the area under the ROC curve (AUC) for the normalized scatter value was significantly higher than for transmission (0.86 vs. 0.78, p<0.001) and dark-field value (0.86 vs. 0.52, p<0.001) alone. Normalized scatter showed very high sensitivity for a wide range of specificity values (94% sensitivity at 75% specificity). Using the normalized scatter signal to display the regional distribution of emphysema provides color-coded parametric maps, which show the best correlation with histopathology. Conclusion In a murine model, the complementary information provided by X-ray transmission and dark-field images adds incremental diagnostic value in detecting pulmonary emphysema and visualizing its regional distribution as compared to conventional X-ray projections. PMID:23555692

Diagnosing and mapping pulmonary emphysema on X-ray projection images: incremental value of grating-based X-ray dark-field imaging.

PubMed

Meinel, Felix G; Schwab, Felix; Schleede, Simone; Bech, Martin; Herzen, Julia; Achterhold, Klaus; Auweter, Sigrid; Bamberg, Fabian; Yildirim, Ali Ö; Bohla, Alexander; Eickelberg, Oliver; Loewen, Rod; Gifford, Martin; Ruth, Ronald; Reiser, Maximilian F; Pfeiffer, Franz; Nikolaou, Konstantin

2013-01-01

To assess whether grating-based X-ray dark-field imaging can increase the sensitivity of X-ray projection images in the diagnosis of pulmonary emphysema and allow for a more accurate assessment of emphysema distribution. Lungs from three mice with pulmonary emphysema and three healthy mice were imaged ex vivo using a laser-driven compact synchrotron X-ray source. Median signal intensities of transmission (T), dark-field (V) and a combined parameter (normalized scatter) were compared between emphysema and control group. To determine the diagnostic value of each parameter in differentiating between healthy and emphysematous lung tissue, a receiver-operating-characteristic (ROC) curve analysis was performed both on a per-pixel and a per-individual basis. Parametric maps of emphysema distribution were generated using transmission, dark-field and normalized scatter signal and correlated with histopathology. Transmission values relative to water were higher for emphysematous lungs than for control lungs (1.11 vs. 1.06, p<0.001). There was no difference in median dark-field signal intensities between both groups (0.66 vs. 0.66). Median normalized scatter was significantly lower in the emphysematous lungs compared to controls (4.9 vs. 10.8, p<0.001), and was the best parameter for differentiation of healthy vs. emphysematous lung tissue. In a per-pixel analysis, the area under the ROC curve (AUC) for the normalized scatter value was significantly higher than for transmission (0.86 vs. 0.78, p<0.001) and dark-field value (0.86 vs. 0.52, p<0.001) alone. Normalized scatter showed very high sensitivity for a wide range of specificity values (94% sensitivity at 75% specificity). Using the normalized scatter signal to display the regional distribution of emphysema provides color-coded parametric maps, which show the best correlation with histopathology. In a murine model, the complementary information provided by X-ray transmission and dark-field images adds incremental diagnostic value in detecting pulmonary emphysema and visualizing its regional distribution as compared to conventional X-ray projections.

Boundary conformal anomalies on hyperbolic spaces and Euclidean balls

NASA Astrophysics Data System (ADS)

Rodriguez-Gomez, Diego; Russo, Jorge G.

2017-12-01

We compute conformal anomalies for conformal field theories with free conformal scalars and massless spin 1/2 fields in hyperbolic space ℍ d and in the ball B^d , for 2≤d≤7. These spaces are related by a conformal transformation. In even dimensional spaces, the conformal anomalies on ℍ2 n and B^{2n} are shown to be identical. In odd dimensional spaces, the conformal anomaly on B^{2n+1} comes from a boundary contribution, which exactly coincides with that of ℍ2 n + 1 provided one identifies the UV short-distance cutoff on B^{2n+1} with the inverse large distance IR cutoff on ℍ2 n + 1, just as prescribed by the conformal map. As an application, we determine, for the first time, the conformal anomaly coefficients multiplying the Euler characteristic of the boundary for scalars and half-spin fields with various boundary conditions in d = 5 and d = 7.

Cross-correlation cosmography with intensity mapping of the neutral hydrogen 21 cm emission

NASA Astrophysics Data System (ADS)

Pourtsidou, A.; Bacon, D.; Crittenden, R.

2015-11-01

The cross-correlation of a foreground density field with two different background convergence fields can be used to measure cosmographic distance ratios and constrain dark energy parameters. We investigate the possibility of performing such measurements using a combination of optical galaxy surveys and neutral hydrogen (HI) intensity mapping surveys, with emphasis on the performance of the planned Square Kilometre Array (SKA). Using HI intensity mapping to probe the foreground density tracer field and/or the background source fields has the advantage of excellent redshift resolution and a longer lever arm achieved by using the lensing signal from high redshift background sources. Our results show that, for our best SKA-optical configuration of surveys, a constant equation of state for dark energy can be constrained to ≃8 % for a sky coverage fsky=0.5 and assuming a σ (ΩDE)=0.03 prior for the dark energy density parameter. We also show that using the cosmic microwave background as the second source plane is not competitive, even when considering a COrE-like satellite.

Using manual prostate contours to enhance deformable registration of endorectal MRI.

PubMed

Cheung, M R; Krishnan, K

2012-10-01

Endorectal MRI provides detailed images of the prostate anatomy and is useful for radiation treatment planning. Here we describe a Demons field-initialized B-spline deformable registration of prostate MRI. T2-weighted endorectal MRIs of five patients were used. The prostate and the tumor of each patient were manually contoured. The planning MRIs and their segmentations were simulated by warping the corresponding endorectal MRIs using thin plate spline (TPS). Deformable registration was initialized using the deformation field generated using Demons algorithm to map the deformed prostate MRI to the non-deformed one. The solution was refined with B-Spline registration. Volume overlap similarity was used to assess the accuracy of registration and to suggest a minimum margin to account for the registration errors. Initialization using Demons algorithm took about 15 min on a computer with 2.8 GHz Intel, 1.3 GB RAM. Refinement B-spline registration (200 iterations) took less than 5 min. Using the synthetic images as the ground truth, at zero margin, the average (S.D.) 98 (±0.4)% for prostate coverage was 97 (±1)% for tumor. The average (±S.D.) treatment margin required to cover the entire prostate was 1.5 (±0.2)mm. The average (± S.D.) treatment margin required to cover the tumor was 0.7 (±0.1)mm. We also demonstrated the challenges in registering an in vivo deformed MRI to an in vivo non-deformed MRI. We here present a deformable registration scheme that can overcome large deformation. This platform is expected to be useful for prostate cancer radiation treatment planning. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

A High-Density Consensus Map of Common Wheat Integrating Four Mapping Populations Scanned by the 90K SNP Array

PubMed Central

Wen, Weie; He, Zhonghu; Gao, Fengmei; Liu, Jindong; Jin, Hui; Zhai, Shengnan; Qu, Yanying; Xia, Xianchun

2017-01-01

A high-density consensus map is a powerful tool for gene mapping, cloning and molecular marker-assisted selection in wheat breeding. The objective of this study was to construct a high-density, single nucleotide polymorphism (SNP)-based consensus map of common wheat (Triticum aestivum L.) by integrating genetic maps from four recombinant inbred line populations. The populations were each genotyped using the wheat 90K Infinium iSelect SNP assay. A total of 29,692 SNP markers were mapped on 21 linkage groups corresponding to 21 hexaploid wheat chromosomes, covering 2,906.86 cM, with an overall marker density of 10.21 markers/cM. Compared with the previous maps based on the wheat 90K SNP chip detected 22,736 (76.6%) of the SNPs with consistent chromosomal locations, whereas 1,974 (6.7%) showed different chromosomal locations, and 4,982 (16.8%) were newly mapped. Alignment of the present consensus map and the wheat expressed sequence tags (ESTs) Chromosome Bin Map enabled assignment of 1,221 SNP markers to specific chromosome bins and 819 ESTs were integrated into the consensus map. The marker orders of the consensus map were validated based on physical positions on the wheat genome with Spearman rank correlation coefficients ranging from 0.69 (4D) to 0.97 (1A, 4B, 5B, and 6A), and were also confirmed by comparison with genetic position on the previously 40K SNP consensus map with Spearman rank correlation coefficients ranging from 0.84 (6D) to 0.99 (6A). Chromosomal rearrangements reported previously were confirmed in the present consensus map and new putative rearrangements were identified. In addition, an integrated consensus map was developed through the combination of five published maps with ours, containing 52,607 molecular markers. The consensus map described here provided a high-density SNP marker map and a reliable order of SNPs, representing a step forward in mapping and validation of chromosomal locations of SNPs on the wheat 90K array. Moreover, it can be used as a reference for quantitative trait loci (QTL) mapping to facilitate exploitation of genes and QTL in wheat breeding. PMID:28848588

Selection of vegetation indices for mapping the sugarcane condition around the oil and gas field of North West Java Basin, Indonesia

NASA Astrophysics Data System (ADS)

Muji Susantoro, Tri; Wikantika, Ketut; Saepuloh, Asep; Handoyo Harsolumakso, Agus

2018-05-01

Selection of vegetation indices in plant mapping is needed to provide the best information of plant conditions. The methods used in this research are the standard deviation and the linear regression. This research tried to determine the vegetation indices used for mapping the sugarcane conditions around oil and gas fields. The data used in this study is Landsat 8 OLI/TIRS. The standard deviation analysis on the 23 vegetation indices with 27 samples has resulted in the six highest standard deviations of vegetation indices, termed as GRVI, SR, NLI, SIPI, GEMI and LAI. The standard deviation values are 0.47; 0.43; 0.30; 0.17; 0.16 and 0.13. Regression correlation analysis on the 23 vegetation indices with 280 samples has resulted in the six vegetation indices, termed as NDVI, ENDVI, GDVI, VARI, LAI and SIPI. This was performed based on regression correlation with the lowest value R2 than 0,8. The combined analysis of the standard deviation and the regression correlation has obtained the five vegetation indices, termed as NDVI, ENDVI, GDVI, LAI and SIPI. The results of the analysis of both methods show that a combination of two methods needs to be done to produce a good analysis of sugarcane conditions. It has been clarified through field surveys and showed good results for the prediction of microseepages.

Far-Field RF Sheaths due to Shear Alfvén Waves in the LAPD

NASA Astrophysics Data System (ADS)

Martin, Michael; van Compernolle, Bart; Gekelman, Walter; Pribyl, Pat; Carter, Troy; D'Ippolito, Daniel A.; Myra, James R.

2013-10-01

Ion cyclotron resonance heating (ICRH) is an important tool in current fusion experiments and will be an essential heating component in ITER. ICRH could be limited by deleterious effects due to the formation of radio frequency (RF) sheaths in the near-field (at the antenna) and in the far-field (e.g. in the divertor region). Far-field sheaths are thought to be caused by the direct launch of or mode conversion to a shear Alfvén wave with an electric field component parallel to the background magnetic field at the wall. In this experiment a limiter plate was inserted into a cylindrical plasma in the LAPD (ne ~ 1010-11 cm-3, Te ~ 5 eV, B0 = 1.2 kG) and RF sheaths were created by directly launching the shear Alfven wave. Plasma potential measurements were made with an emissive probe. DC plasma potential rectification was observed along field lines connected to the plate, serving as an indirect measure of RF sheath formation. 2-D maps of plasma properties and rectified plasma potential will be presented. This research is part of an ongoing campaign to study the formation and structure of RF sheaths.

The Simple Map for Single-null Divertor Tokamak : How to Find Chaos

NASA Astrophysics Data System (ADS)

Martinez, Ilissa; Ali, Halima; Punjabi, Alkesh

2000-10-01

The Simple Map^1 represents the magnetic field inside a single-null divertor tokamak. The Simple map is given by the equations X_n+1=X_n-KYn (1-Y_n) and Y_n+1=Y_n+KX_n+1. We fix k at 0.6 and X0 at 0. We choose two different starting values of Y_0. These two values are very close together. These values of Y0 represent two field lines which start out very close together. We calculate the distance between two field lines as n is increased. This distance is given by d_n. For both equations given by the distance formula (d_n=[Y_n,2-Y_n,1)^2+(X_n,2-X_n,1)^2]. If dn increases exponentially as n is increased we find chaos, if dn does not increase exponentially then you have not found chaos. We have found chaos, Y0 must be less than one, but higher than 0.9971 for chaos. For Y0 between 0 and 0.9971, there is no chaos. This work is supported by US DOE OFES. Ms. Ilissa Martinez is a HU CFRT Summer Fusion High School Workshop Scholar from the Blanca Malaret High School in Puerto Rico. She is supported by NASA SHARP Plus Program. 1. Punjabi A, Verma A and Booze A, Phys Rev Lett 69 3322 (1992) and J Plasma Phys 52 91 (1994)

Radiofrequency pulse design in parallel transmission under strict temperature constraints.

PubMed

Boulant, Nicolas; Massire, Aurélien; Amadon, Alexis; Vignaud, Alexandre

2014-09-01

To gain radiofrequency (RF) pulse performance by directly addressing the temperature constraints, as opposed to the specific absorption rate (SAR) constraints, in parallel transmission at ultra-high field. The magnitude least-squares RF pulse design problem under hard SAR constraints was solved repeatedly by using the virtual observation points and an active-set algorithm. The SAR constraints were updated at each iteration based on the result of a thermal simulation. The numerical study was performed for an SAR-demanding and simplified time of flight sequence using B1 and ΔB0 maps obtained in vivo on a human brain at 7T. The proposed adjustment of the SAR constraints combined with an active-set algorithm provided higher flexibility in RF pulse design within a reasonable time. The modifications of those constraints acted directly upon the thermal response as desired. Although further confidence in the thermal models is needed, this study shows that RF pulse design under strict temperature constraints is within reach, allowing better RF pulse performance and faster acquisitions at ultra-high fields at the cost of higher sequence complexity. Copyright © 2013 Wiley Periodicals, Inc.

Multi-scale graph-cut algorithm for efficient water-fat separation.

PubMed

Berglund, Johan; Skorpil, Mikael

2017-09-01

To improve the accuracy and robustness to noise in water-fat separation by unifying the multiscale and graph cut based approaches to B 0 -correction. A previously proposed water-fat separation algorithm that corrects for B 0 field inhomogeneity in 3D by a single quadratic pseudo-Boolean optimization (QPBO) graph cut was incorporated into a multi-scale framework, where field map solutions are propagated from coarse to fine scales for voxels that are not resolved by the graph cut. The accuracy of the single-scale and multi-scale QPBO algorithms was evaluated against benchmark reference datasets. The robustness to noise was evaluated by adding noise to the input data prior to water-fat separation. Both algorithms achieved the highest accuracy when compared with seven previously published methods, while computation times were acceptable for implementation in clinical routine. The multi-scale algorithm was more robust to noise than the single-scale algorithm, while causing only a small increase (+10%) of the reconstruction time. The proposed 3D multi-scale QPBO algorithm offers accurate water-fat separation, robustness to noise, and fast reconstruction. The software implementation is freely available to the research community. Magn Reson Med 78:941-949, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Allelic Analysis of Sheath Blight Resistance with Association Mapping in Rice

PubMed Central

Jia, Limeng; Yan, Wengui; Zhu, Chengsong; Agrama, Hesham A.; Jackson, Aaron; Yeater, Kathleen; Li, Xiaobai; Huang, Bihu; Hu, Biaolin; McClung, Anna; Wu, Dianxing

2012-01-01

Sheath blight (ShB) caused by the soil-borne pathogen Rhizoctonia solani is one of the most devastating diseases in rice world-wide. Global attention has focused on examining individual mapping populations for quantitative trait loci (QTLs) for ShB resistance, but to date no study has taken advantage of association mapping to examine hundreds of lines for potentially novel QTLs. Our objective was to identify ShB QTLs via association mapping in rice using 217 sub-core entries from the USDA rice core collection, which were phenotyped with a micro-chamber screening method and genotyped with 155 genome-wide markers. Structure analysis divided the mapping panel into five groups, and model comparison revealed that PCA5 with genomic control was the best model for association mapping of ShB. Ten marker loci on seven chromosomes were significantly associated with response to the ShB pathogen. Among multiple alleles in each identified loci, the allele contributing the greatest effect to ShB resistance was named the putative resistant allele. Among 217 entries, entry GSOR 310389 contained the most putative resistant alleles, eight out of ten. The number of putative resistant alleles presented in an entry was highly and significantly correlated with the decrease of ShB rating (r = −0.535) or the increase of ShB resistance. Majority of the resistant entries that contained a large number of the putative resistant alleles belonged to indica, which is consistent with a general observation that most ShB resistant accessions are of indica origin. These findings demonstrate the potential to improve breeding efficiency by using marker-assisted selection to pyramid putative resistant alleles from various loci in a cultivar for enhanced ShB resistance in rice. PMID:22427867

Body Topography Parcellates Human Sensory and Motor Cortex.

PubMed

Kuehn, Esther; Dinse, Juliane; Jakobsen, Estrid; Long, Xiangyu; Schäfer, Andreas; Bazin, Pierre-Louis; Villringer, Arno; Sereno, Martin I; Margulies, Daniel S

2017-07-01

The cytoarchitectonic map as proposed by Brodmann currently dominates models of human sensorimotor cortical structure, function, and plasticity. According to this model, primary motor cortex, area 4, and primary somatosensory cortex, area 3b, are homogenous areas, with the major division lying between the two. Accumulating empirical and theoretical evidence, however, has begun to question the validity of the Brodmann map for various cortical areas. Here, we combined in vivo cortical myelin mapping with functional connectivity analyses and topographic mapping techniques to reassess the validity of the Brodmann map in human primary sensorimotor cortex. We provide empirical evidence that area 4 and area 3b are not homogenous, but are subdivided into distinct cortical fields, each representing a major body part (the hand and the face). Myelin reductions at the hand-face borders are cortical layer-specific, and coincide with intrinsic functional connectivity borders as defined using large-scale resting state analyses. Our data extend the Brodmann model in human sensorimotor cortex and suggest that body parts are an important organizing principle, similar to the distinction between sensory and motor processing. © The Author 2017. Published by Oxford University Press.

Genetic and physical map of the von Recklinghausen neurofibromatosis (NF1) region on chromosome 17

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yagle, M.K.; Parruti, G.; Xu, W.

The von Recklinghausen neurofibromatosis 1 (NF1) locus has been previously assigned to the proximal long arm of chromosome 17, and two NF1 patients have been identified who have constitutional balanced translocations involving 17q11.2. The authors have constructed a cosmid library from a chromosome-mediated gene transfectant, KLT8, that contains approximately 10% of chromosome 17, including 17q11.2. Cosmids isolated from this library have been mapped across a panel of somatic cell hybrids, including the hybrids from the two patients, and have been localized to seven small regions of proximal 17q. They have 5 cosmids that map directly above the two NF1 translocations,more » and 11 cosmids that map directly below. Of these, 2 cosmids in each region are linked to the disease locus and 3 of these cosmids show no recombination. One distal cosmid, 2B/B35, detects the two NF1 translocations by pulsed-field gel analysis and has been used to produce a long-range restriction map that covers the translocations.« less

Recent CCD Images of Hubble's Variable Nebula (NGC 2261)

NASA Astrophysics Data System (ADS)

Meisel, D.; Dykstra, W.; Schulitz, F.

1992-05-01

Four CCD exposures of Hubble's Variable Nebula were taken with the RIT Kodak KF-4200 array using the 0.6m Hawaii telescope at Mauna Kea. The field of view was 5' x 7' of arc with a resolution of 0.3" per pixel. The effective wavelengths were v 5300A, r 6200A, i 8000A and ii 9000A. Preliminary image processing has been done on Macintosh IIfxs and LCs using NIH Image1.44b20 and has revealed considerable detail in the dust cloud, but no obvious obscuration features as seen at past epochs. Final image processing is continuing on Sun workstations using IRAF and SAO Image. Differences of structure between the wavelength bands and comparisons between images at other epochs, CO maps, and polarimetry will be discussed.

Mapping paddy rice planting area in cold temperate climate region through analysis of time series Landsat 8 (OLI), Landsat 7 (ETM+) and MODIS imagery

NASA Astrophysics Data System (ADS)

Qin, Yuanwei; Xiao, Xiangming; Dong, Jinwei; Zhou, Yuting; Zhu, Zhe; Zhang, Geli; Du, Guoming; Jin, Cui; Kou, Weili; Wang, Jie; Li, Xiangping

2015-07-01

Accurate and timely rice paddy field maps with a fine spatial resolution would greatly improve our understanding of the effects of paddy rice agriculture on greenhouse gases emissions, food and water security, and human health. Rice paddy field maps were developed using optical images with high temporal resolution and coarse spatial resolution (e.g., Moderate Resolution Imaging Spectroradiometer (MODIS)) or low temporal resolution and high spatial resolution (e.g., Landsat TM/ETM+). In the past, the accuracy and efficiency for rice paddy field mapping at fine spatial resolutions were limited by the poor data availability and image-based algorithms. In this paper, time series MODIS and Landsat ETM+/OLI images, and the pixel- and phenology-based algorithm are used to map paddy rice planting area. The unique physical features of rice paddy fields during the flooding/open-canopy period are captured with the dynamics of vegetation indices, which are then used to identify rice paddy fields. The algorithm is tested in the Sanjiang Plain (path/row 114/27) in China in 2013. The overall accuracy of the resulted map of paddy rice planting area generated by both Landsat ETM+ and OLI is 97.3%, when evaluated with areas of interest (AOIs) derived from geo-referenced field photos. The paddy rice planting area map also agrees reasonably well with the official statistics at the level of state farms (R2 = 0.94). These results demonstrate that the combination of fine spatial resolution images and the phenology-based algorithm can provide a simple, robust, and automated approach to map the distribution of paddy rice agriculture in a year.

Mapping paddy rice planting area in cold temperate climate region through analysis of time series Landsat 8 (OLI), Landsat 7 (ETM+) and MODIS imagery.

PubMed

Qin, Yuanwei; Xiao, Xiangming; Dong, Jinwei; Zhou, Yuting; Zhu, Zhe; Zhang, Geli; Du, Guoming; Jin, Cui; Kou, Weili; Wang, Jie; Li, Xiangping

2015-07-01

Accurate and timely rice paddy field maps with a fine spatial resolution would greatly improve our understanding of the effects of paddy rice agriculture on greenhouse gases emissions, food and water security, and human health. Rice paddy field maps were developed using optical images with high temporal resolution and coarse spatial resolution (e.g., Moderate Resolution Imaging Spectroradiometer (MODIS)) or low temporal resolution and high spatial resolution (e.g., Landsat TM/ETM+). In the past, the accuracy and efficiency for rice paddy field mapping at fine spatial resolutions were limited by the poor data availability and image-based algorithms. In this paper, time series MODIS and Landsat ETM+/OLI images, and the pixel- and phenology-based algorithm are used to map paddy rice planting area. The unique physical features of rice paddy fields during the flooding/open-canopy period are captured with the dynamics of vegetation indices, which are then used to identify rice paddy fields. The algorithm is tested in the Sanjiang Plain (path/row 114/27) in China in 2013. The overall accuracy of the resulted map of paddy rice planting area generated by both Landsat ETM+ and OLI is 97.3%, when evaluated with areas of interest (AOIs) derived from geo-referenced field photos. The paddy rice planting area map also agrees reasonably well with the official statistics at the level of state farms ( R 2 = 0.94). These results demonstrate that the combination of fine spatial resolution images and the phenology-based algorithm can provide a simple, robust, and automated approach to map the distribution of paddy rice agriculture in a year.

Global Ocean Tides. Part VII. The Diurnal Principal Solar Tide (P1), Atlas of Tidal Charts and Maps.

DTIC Science & Technology

1981-05-01

Dens Mapping Agency Monterey, CA 93940 Aerospace (enter ATTN: (’I)R B. Schrainm St. Louis, MO 63118 ATTN: William P. Wall Director Don McEntee Naval...Dr. J. R. Apel Cambridge, MA 02138 II. 0. Motjeld ATI"N: l)r. F. M. (;aposchkin C. A. Pearson l)r. G. C. Wiffenbach M. Byrne B. Stevens DISTRIBUTION

AT1 receptor-mediated uptake of angiotensin II and NHE-3 expression in proximal tubule cells through a microtubule-dependent endocytic pathway.

PubMed

Li, Xiao C; Hopfer, Ulrich; Zhuo, Jia L

2009-11-01

Angiotensin II (ANG II) is taken up by proximal tubule (PT) cells via AT1 (AT1a) receptor-mediated endocytosis, but the underlying cellular mechanisms remain poorly understood. The present study tested the hypothesis that the microtubule- rather than the clathrin-dependent endocytic pathway regulates AT1-mediated uptake of ANG II and ANG II-induced sodium and hydrogen exchanger-3 (NHE-3) expression in PT cells. The expression of AT1 receptors, clathrin light (LC) and heavy chain (HC) proteins, and type 1 microtubule-associated proteins (MAPs; MAP-1A and MAP-1B) in PT cells were knocked down by their respective small interfering (si) RNAs before AT1-mediated FITC-ANG II uptake and ANG II-induced NHE-3 expression were studied. AT1 siRNAs inhibited AT1 expression and blocked ANG II-induced NHE-3 expression in PT cells, as expected (P < 0.01). Clathrin LC or HC siRNAs knocked down their respective proteins by approximately 90% with a peak response at 24 h, and blocked the clathrin-dependent uptake of Alexa Fluor 594-transferrin (P < 0.01). However, neither LC nor HC siRNAs inhibited AT1-mediated uptake of FITC-ANG II or affected ANG II-induced NHE-3 expression. MAP-1A or MAP-1B siRNAs markedly knocked down MAP-1A or MAP-1B proteins in a time-dependent manner with peak inhibitions at 48 h (>76.8%, P < 0.01). MAP protein knockdown resulted in approximately 52% decreases in AT1-mediated FITC-ANG II uptake and approximately 66% decreases in ANG II-induced NHE-3 expression (P < 0.01). These effects were associated with threefold decreases in ANG II-induced MAP kinases ERK 1/2 activation (P < 0.01), but not with altered AT1 expression or clathrin-dependent transferrin uptake. Both losartan and AT1a receptor deletion in mouse PT cells completely abolished the effects of MAP-1A knockdown on ANG II-induced NHE-3 expression and activation of MAP kinases ERK1/2. Our findings suggest that the alternative microtubule-dependent endocytic pathway, rather than the canonical clathrin-dependent pathway, plays an important role in AT1 (AT1a)-mediated uptake of extracellular ANG II and ANG II-induced NHE-3 expression in PT cells.

Triple Modular Redundancy (TMR) in a Configurable Fault-Tolerant Processor (CFTP) for Space Applications

DTIC Science & Technology

2003-12-01

internal structure ARCHITECTURE rtl OF log_barrel IS signal sel1, sel2, sel3, sel4 : std_logic_vector ( 1 downto 0); signal buf0b, buf0c, buf0d...shift(2); sel3(0) <= ar_or_log and shift(2); sel4 (1) <= l_or_r and shift(3); sel4 (0) <= ar_or_log and shift(3); buf0b <= in_word(14 downto 0...mux4: word_mux4 port map ( a => buf3a, b => buf3b, c => buf3c, d => buf3d, sel => sel4 , out_word => out_word

Multi-parametric MRI findings of granulomatous prostatitis developing after intravesical bacillus calmette-guérin therapy.

PubMed

Gottlieb, Josh; Princenthal, Robert; Cohen, Martin I

2017-07-01

To evaluate the multi-parametric MRI (mpMRI) findings in patients with biopsy-proven granulomatous prostatitis and prior Bacillus Calmette-Guérin (BCG) exposure. MRI was performed in six patients with pathologically proven granulomatous prostatitis and a prior history of bladder cancer treated with intravesical BCG therapy. Multi-parametric prostate MRI images were recorded on a GE 750W or Philips Achieva 3.0 Tesla MRI scanner with high-resolution, small-field-of-view imaging consisting of axial T2, axial T1, coronal T2, sagittal T2, axial multiple b-value diffusion (multiple values up to 1200 or 1400), and dynamic contrast-enhanced 3D axial T1 with fat suppression sequence. Two different patterns of MR findings were observed. Five of the six patients had a low mean ADC value <1000 (decreased signal on ADC map images) and isointense signal on high-b-value imaging (b = 1200 or 1400), consistent with nonspecific granulomatous prostatitis. The other pattern seen in one of the six patients was decreased signal on the ADC map images with increased signal on the high-b-value sequence, revealing true restricted diffusion indistinguishable from aggressive prostate cancer. This patient had biopsy-confirmed acute BCG prostatitis. Our study suggests that patients with known BCG exposure and PI-RADS v2 scores ≤3, showing similar mpMRI findings as demonstrated, may not require prostate biopsy.

Molecular Genetic Studies of Bone Mechanical Strain and of Pedigrees with Very High Bone Density

DTIC Science & Technology

2007-11-01

regulating the expression of BSP. 17 0-25 Map3k4 Clcn7 Thbs2 Traf7 Tnf Notch3 Vegfa Runx2 Involved in normal skeletal patterning. Critical for...Chrs cM Genes 8 38–69 Ptger1 Junb Mt1, 2 Cdh11 Hsd11b2 Cdh1 Cbfb Hsd17b2 Il17c 16 30–46 Col8a1 EphA3 Pit1 17 0–25 Map3k4 Clcn7 Thbs2 Traf7 Tnf Notch3

Multiscale Reconstruction for Magnetic Resonance Fingerprinting

PubMed Central

Pierre, Eric Y.; Ma, Dan; Chen, Yong; Badve, Chaitra; Griswold, Mark A.

2015-01-01

Purpose To reduce acquisition time needed to obtain reliable parametric maps with Magnetic Resonance Fingerprinting. Methods An iterative-denoising algorithm is initialized by reconstructing the MRF image series at low image resolution. For subsequent iterations, the method enforces pixel-wise fidelity to the best-matching dictionary template then enforces fidelity to the acquired data at slightly higher spatial resolution. After convergence, parametric maps with desirable spatial resolution are obtained through template matching of the final image series. The proposed method was evaluated on phantom and in-vivo data using the highly-undersampled, variable-density spiral trajectory and compared with the original MRF method. The benefits of additional sparsity constraints were also evaluated. When available, gold standard parameter maps were used to quantify the performance of each method. Results The proposed approach allowed convergence to accurate parametric maps with as few as 300 time points of acquisition, as compared to 1000 in the original MRF work. Simultaneous quantification of T1, T2, proton density (PD) and B0 field variations in the brain was achieved in vivo for a 256×256 matrix for a total acquisition time of 10.2s, representing a 3-fold reduction in acquisition time. Conclusions The proposed iterative multiscale reconstruction reliably increases MRF acquisition speed and accuracy. PMID:26132462

Characterizing regional soil mineral composition using spectroscopyand geostatistics

USGS Publications Warehouse

Mulder, V.L.; de Bruin, S.; Weyermann, J.; Kokaly, Raymond F.; Schaepman, M.E.

2013-01-01

This work aims at improving the mapping of major mineral variability at regional scale using scale-dependent spatial variability observed in remote sensing data. Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) data and statistical methods were combined with laboratory-based mineral characterization of field samples to create maps of the distributions of clay, mica and carbonate minerals and their abundances. The Material Identification and Characterization Algorithm (MICA) was used to identify the spectrally-dominant minerals in field samples; these results were combined with ASTER data using multinomial logistic regression to map mineral distributions. X-ray diffraction (XRD)was used to quantify mineral composition in field samples. XRD results were combined with ASTER data using multiple linear regression to map mineral abundances. We testedwhether smoothing of the ASTER data to match the scale of variability of the target sample would improve model correlations. Smoothing was donewith Fixed Rank Kriging (FRK) to represent the mediumand long-range spatial variability in the ASTER data. Stronger correlations resulted using the smoothed data compared to results obtained with the original data. Highest model accuracies came from using both medium and long-range scaled ASTER data as input to the statistical models. High correlation coefficients were obtained for the abundances of calcite and mica (R2 = 0.71 and 0.70, respectively). Moderately-high correlation coefficients were found for smectite and kaolinite (R2 = 0.57 and 0.45, respectively). Maps of mineral distributions, obtained by relating ASTER data to MICA analysis of field samples, were found to characterize major soil mineral variability (overall accuracies for mica, smectite and kaolinite were 76%, 89% and 86% respectively). The results of this study suggest that the distributions of minerals and their abundances derived using FRK-smoothed ASTER data more closely match the spatial variability of soil and environmental properties at regional scale.

Field emission investigations of single crystal LaB6 FEA fabricated by femtosecond laser direct writing

NASA Astrophysics Data System (ADS)

Liu, Hongliang; Zhang, Xin; Li, Yuancheng; Xiao, Yixin; Zhang, Wei; Zhang, Jiu-Xing

2018-04-01

The femtosecond laser direct writing method has been used to fabricate the single crystal lanthanum hexaboride (LaB6) field-emission tip arrays (FEAs). The morphologies, structure phase, and field emission of the single crystal LaB6 FEAs are systematically studied. The nanostructures on the surface of tips with the LaB6 phase were formed, resulting in favor of improving field emission, particularly for samples with the nanohill shaped bulges having the size of about 100 nm. The produced single crystal LaB6 FEAs have a uniform structure and a controllable curvature radius of about 0.5-3.0 μm. The FEAs with a curvature radius of about 0.5 μm as field emitters have the best field emission performance, which the field emission turns on and the threshold electric fields are as low as 2.2 and 3.8 V/μm with an emission current of 1.0 A/cm2 at 8.0 V/μm, and the emission current exhibits high stability. These indicate that the processed LaB6 FEAs have a good prospect applied in vacuum microelectronic devices and the simple femtosecond laser direct writing method could lead to an approach for the development of electron sources.

High-Density Genetic Linkage Map Construction and Quantitative Trait Locus Mapping for Hawthorn (Crataegus pinnatifida Bunge).

PubMed

Zhao, Yuhui; Su, Kai; Wang, Gang; Zhang, Liping; Zhang, Jijun; Li, Junpeng; Guo, Yinshan

2017-07-14

Genetic linkage maps are an important tool in genetic and genomic research. In this study, two hawthorn cultivars, Qiujinxing and Damianqiu, and 107 progenies from a cross between them were used for constructing a high-density genetic linkage map using the 2b-restriction site-associated DNA (2b-RAD) sequencing method, as well as for mapping quantitative trait loci (QTL) for flavonoid content. In total, 206,411,693 single-end reads were obtained, with an average sequencing depth of 57× in the parents and 23× in the progeny. After quality trimming, 117,896 high-quality 2b-RAD tags were retained, of which 42,279 were polymorphic; of these, 12,951 markers were used for constructing the genetic linkage map. The map contained 17 linkage groups and 3,894 markers, with a total map length of 1,551.97 cM and an average marker interval of 0.40 cM. QTL mapping identified 21 QTLs associated with flavonoid content in 10 linkage groups, which explained 16.30-59.00% of the variance. This is the first high-density linkage map for hawthorn, which will serve as a basis for fine-scale QTL mapping and marker-assisted selection of important traits in hawthorn germplasm and will facilitate chromosome assignment for hawthorn whole-genome assemblies in the future.

SU-G-JeP2-10: On the Need for a Dynamic Model for Patient-Specific Distortion Corrections for MR-Only Pelvis Treatment Planning

DOE Office of Scientific and Technical Information (OSTI.GOV)

Glide-Hurst, C; Zheng, W; Stehning, C

Purpose: Patient-specific distortions, particularly near tissue/air interfaces, require assessment and possible corrections for MRI-only radiation treatment planning (RTP). However, patients are dynamic due to changes in physiological status and motion during imaging sessions. This work investigated the need for dynamic patient-specific distortion corrections to support pelvis MR-only RTP. Methods: The pelvises of healthy volunteers were imaged at 1.0T, 1.5T, and 3.0T. Patient-specific distortion field maps were generated using a dual-echo gradient-recalled echo (GRE) sequence with B0 field maps obtained from the phase difference between the two echoes acquired at two timepoints: empty and full bladders. To quantify changes arising frommore » respiratory state, end-inhalation and end-expiration data were acquired. Distortion map differences were computed between the empty/full bladder and inhalation/expiration to characterize local changes. The normalized frequency distortion distributions in T2-weighted TSE images were characterized, particularly for simulated prostate planning target volumes (PTVs). Results: Changes in rectal and bowel air location were observed, likely due to changes in bladder filling. Within the PTVs, displacement differences (mean ± stdev, range) were −0.02 ± 0.02 mm (−0.13 to 0.07 mm) for 1.0T, −0.1 ± 0.2 mm (−0.92 to 0.74 mm) for 1.5T, and −0.20 ± 0.03 mm (−0.61 to 0.38 mm) for 3.0T. Local changes of ∼1 mm at the prostate-rectal interface were observed for an extreme case at 1.5T. For end-inhale and end-exhale scans at 3.0T, 99% of the voxels had Δx differences within ±0.25mm, thus the displacement differences due to respiratory state appear negligible in the pelvis. Conclusion: Our work suggests that transient bowel/rectal gas due to bladder filling may yield non-negligible patient-specific distortion differences near the prostate/rectal interface, whereas respiration had minimal effect. A temporal patient model for patient-specific distortion corrections may be advantageous for MR-only RTP, although further investigations in larger cohorts are needed to fully characterize distortion magnitude. The submitting institution has research agreements with Philips Healthcare. Research sponsored by a Henry Ford Health System Internal Mentored Grant.« less

Magnetic order, hysteresis, and phase coexistence in magnetoelectric LiCoPO 4

DOE PAGES

Fogh, Ellen; Toft-Petersen, Rasmus; Ressouche, Eric; ...

2017-09-15

Here, the magnetic phase diagram of magnetoelectric LiCoPO 4 is established using neutron diffraction and magnetometry in fields up to 25.9T applied along the crystallographic b axis. For fields greater than 11.9T, the magnetic unit cell triples in size with propagation vector Q = (0,1/3,0). A magnetized elliptic cycloid is formed with spins in the (b,c) plane and the major axis oriented along b. Such a structure allows for the magnetoelectric effect with an electric polarization along c induced by magnetic fields applied along b. Intriguingly, additional ordering vectors Q ≈ (0,1/4,0) and Q ≈ (0,1/2,0) appear for increasing fieldsmore » in the hysteresis region below the transition field. Traces of this behavior are also observed in the magnetization. A simple model based on a mean-field approach is proposed to explain these additional ordering vectors. In the field interval 20.5–21.0T, the propagation vector Q = (0,1/3,0) remains but the spins orient differently compared to the cycloid phase. Furthermore, above 21.0T and up until saturation, a commensurate magnetic structure exists with a ferromagnetic component along b and an antiferromagnetic component along« less

Spatial-temporal three-dimensional ultrasound plane-by-plane active cavitation mapping for high-intensity focused ultrasound in free field and pulsatile flow.

PubMed

Ding, Ting; Hu, Hong; Bai, Chen; Guo, Shifang; Yang, Miao; Wang, Supin; Wan, Mingxi

2016-07-01

Cavitation plays important roles in almost all high-intensity focused ultrasound (HIFU) applications. However, current two-dimensional (2D) cavitation mapping could only provide cavitation activity in one plane. This study proposed a three-dimensional (3D) ultrasound plane-by-plane active cavitation mapping (3D-UPACM) for HIFU in free field and pulsatile flow. The acquisition of channel-domain raw radio-frequency (RF) data in 3D space was performed by sequential plane-by-plane 2D ultrafast active cavitation mapping. Between two adjacent unit locations, there was a waiting time to make cavitation nuclei distribution of the liquid back to the original state. The 3D cavitation map equivalent to the one detected at one time and over the entire volume could be reconstructed by Marching Cube algorithm. Minimum variance (MV) adaptive beamforming was combined with coherence factor (CF) weighting (MVCF) or compressive sensing (CS) method (MVCS) to process the raw RF data for improved beamforming or more rapid data processing. The feasibility of 3D-UPACM was demonstrated in tap-water and a phantom vessel with pulsatile flow. The time interval between temporal evolutions of cavitation bubble cloud could be several microseconds. MVCF beamformer had a signal-to-noise ratio (SNR) at 14.17dB higher, lateral and axial resolution at 2.88times and 1.88times, respectively, which were compared with those of B-mode active cavitation mapping. MVCS beamformer had only 14.94% time penalty of that of MVCF beamformer. This 3D-UPACM technique employs the linear array of a current ultrasound diagnosis system rather than a 2D array transducer to decrease the cost of the instrument. Moreover, although the application is limited by the requirement for a gassy fluid medium or a constant supply of new cavitation nuclei that allows replenishment of nuclei between HIFU exposures, this technique may exhibit a useful tool in 3D cavitation mapping for HIFU with high speed, precision and resolution, especially in a laboratory environment where more careful analysis may be required under controlled conditions. Copyright © 2016 Elsevier B.V. All rights reserved.

Body Mapping as a Youth Sexual Health Intervention and Data Collection Tool.

PubMed

Lys, Candice; Gesink, Dionne; Strike, Carol; Larkin, June

2018-06-01

In this article, we describe and evaluate body mapping as (a) an arts-based activity within Fostering Open eXpression Among Youth (FOXY), an educational intervention targeting Northwest Territories (NWT) youth, and (b) a research data collection tool. Data included individual interviews with 41 female participants (aged 13-17 years) who attended FOXY body mapping workshops in six communities in 2013, field notes taken by the researcher during the workshops and interviews, and written reflections from seven FOXY facilitators on the body mapping process (from 2013 to 2016). Thematic analysis explored the utility of body mapping using a developmental evaluation methodology. The results show body mapping is an intervention tool that supports and encourages participant self-reflection, introspection, personal connectedness, and processing difficult emotions. Body mapping is also a data collection catalyst that enables trust and youth voice in research, reduces verbal communication barriers, and facilitates the collection of rich data regarding personal experiences.

Staufen 2 regulates mGluR long-term depression and Map1b mRNA distribution in hippocampal neurons.

PubMed

Lebeau, Geneviève; Miller, Linda C; Tartas, Maylis; McAdam, Robyn; Laplante, Isabel; Badeaux, Frédérique; DesGroseillers, Luc; Sossin, Wayne S; Lacaille, Jean-Claude

2011-01-01

The two members of the Staufen family of RNA-binding proteins, Stau1 and Stau2, are present in distinct ribonucleoprotein complexes and associate with different mRNAs. Stau1 is required for protein synthesis-dependent long-term potentiation (L-LTP) in hippocampal pyramidal cells. However, the role of Stau2 in synaptic plasticity remains unexplored. We found that unlike Stau1, Stau2 is not required for L-LTP. In contrast, Stau2, but not Stau1, is necessary for DHPG-induced protein synthesis-dependent long-term depression (mGluR-LTD). While Stau2 is involved in early development of spines, its down-regulation does not alter spine morphology or spontaneous miniature synaptic activity in older cultures where LTD occurs. In addition, Stau2, but not Stau1, knockdown reduces the dendritic localization of Map1b mRNA, a specific transcript involved in mGluR-LTD. Moreover, mGluR stimulation with DHPG induces Map1b, but not Map2, mRNA dissociation from mRNA granules containing Stau2 and the ribosomal protein P0. This dissociation was not observed in cells in which Stau2 was depleted. Finally, Stau2 knockdown reduces basal Map1b protein expression in dendrites and prevents DHPG-induced increases in dendritic Map1b protein level. We suggest a role for Stau2 in the generation and regulation of Map1b mRNA containing granules that are required for mGluR-LTD.

Spatial variability of soil carbon stock in the Urucu river basin, Central Amazon-Brazil.

PubMed

Ceddia, Marcos Bacis; Villela, André Luis Oliveira; Pinheiro, Érika Flávia Machado; Wendroth, Ole

2015-09-01

The Amazon Forest plays a major role in C sequestration and release. However, few regional estimates of soil organic carbon (SOC) stock in this ecoregion exist. One of the barriers to improve SOC estimates is the lack of recent soil data at high spatial resolution, which hampers the application of new methods for mapping SOC stock. The aims of this work were: (i) to quantify SOC stock under undisturbed vegetation for the 0-30 and the 0-100 cm under Amazon Forest; (ii) to correlate the SOC stock with soil mapping units and relief attributes and (iii) to evaluate three geostatistical techniques to generate maps of SOC stock (ordinary, isotopic and heterotopic cokriging). The study site is located in the Central region of Amazon State, Brazil. The soil survey covered the study site that has an area of 80 km(2) and resulted in a 1:10,000 soil map. It consisted of 315 field observations (96 complete soil profiles and 219 boreholes). SOC stock was calculated by summing C stocks by horizon, determined as a product of BD, SOC and the horizon thickness. For each one of the 315 soil observations, relief attributes were derived from a topographic map to understand SOC dynamics. The SOC stocks across 30 and 100 cm soil depth were 3.28 and 7.32 kg C m(-2), respectively, which is, 34 and 16%, lower than other studies. The SOC stock is higher in soils developed in relief forms exhibiting well-drained soils, which are covered by Upland Dense Tropical Rainforest. Only SOC stock in the upper 100 cm exhibited spatial dependence allowing the generation of spatial variability maps based on spatial (co)-regionalization. The CTI was inversely correlated with SOC stock and was the only auxiliary variable feasible to be used in cokriging interpolation. The heterotopic cokriging presented the best performance for mapping SOC stock. Copyright © 2015 Elsevier B.V. All rights reserved.

Progress and promises of human cardiac magnetic resonance at ultrahigh fields: a physics perspective.

PubMed

Niendorf, Thoralf; Graessl, Andreas; Thalhammer, Christof; Dieringer, Matthias A; Kraus, Oliver; Santoro, Davide; Fuchs, Katharina; Hezel, Fabian; Waiczies, Sonia; Ittermann, Bernd; Winter, Lukas

2013-04-01

A growing number of reports eloquently speak about explorations into cardiac magnetic resonance (CMR) at ultrahigh magnetic fields (B0≥7.0 T). Realizing the progress, promises and challenges of ultrahigh field (UHF) CMR this perspective outlines current trends in enabling MR technology tailored for cardiac MR in the short wavelength regime. For this purpose many channel radiofrequency (RF) technology concepts are outlined. Basic principles of mapping and shimming of transmission fields including RF power deposition considerations are presented. Explorations motivated by the safe operation of UHF-CMR even in the presence of conductive implants are described together with the physics, numerical simulations and experiments, all of which detailing antenna effects and RF heating induced by intracoronary stents at 7.0 T. Early applications of CMR at 7.0 T and their clinical implications for explorations into cardiovascular diseases are explored including assessment of cardiac function, myocardial tissue characterization, MR angiography of large and small vessels as well as heteronuclear MR of the heart and the skin. A concluding section ventures a glance beyond the horizon and explores future directions. The goal here is not to be comprehensive but to inspire the biomedical and diagnostic imaging communities to throw further weight behind the solution of the many remaining unsolved problems and technical obstacles of UHF-CMR with the goal to transfer MR physics driven methodological advancements into extra clinical value. Copyright © 2012 Elsevier Inc. All rights reserved.

Residual effects of monoammonium phosphate, gypsum and elemental sulfur on cadmium phytoavailability and translocation from soil to wheat in an effluent irrigated field.

PubMed

Qayyum, Muhammad Farooq; Rehman, Muhammad Zia Ur; Ali, Shafaqat; Rizwan, Muhammad; Naeem, Asif; Maqsood, Muhammad Aamer; Khalid, Hinnan; Rinklebe, Jörg; Ok, Yong Sik

2017-05-01

Cadmium (Cd) accumulation in agricultural soils is one of the major threats to food security. The application of inorganic amendments such as mono-ammonium phosphate (MAP), gypsum and elemental sulfur (S) could alleviate the negative effects of Cd in crops. However, their long-term residual effects on decreasing Cd uptake in latter crops remain unclear. A field that had previously been applied with treatments including control and 0.2, 0.4 and 0.8% by weight of each MAP, gypsum and S, and grown with wheat and rice and thereafter wheat in the rotation was selected for this study. Wheat (Triticum aestivum L.) was grown in the same field as the third crop without further application of amendments to evaluate the residual effects of the amendments on Cd uptake by wheat. Plants were harvested at maturity and grain, and straw yield along with Cd concentration in soil, straw, and grains was determined. The addition of MAP and gypsum significantly increased wheat growth and yield and decreased Cd accumulation in straw and grains compared to control while the reverse was found in S application. Both MAP and gypsum decreased AB-DTPA extractable Cd in soil while S increased the bioavailable Cd in soil. Both MAP and gypsum increased the Cd immobilization in the soil and S decreased Cd immobilization in a dose-additive manner. We conclude that MAP and gypsum had a significant residual effect on decreasing Cd uptake in wheat. The cost-benefit ratio revealed that gypsum is an effective amendment for decreasing Cd concentration in plants. Copyright © 2017 Elsevier Ltd. All rights reserved.

Diagnostic classification of macular ganglion cell and retinal nerve fiber layer analysis: differentiation of false-positives from glaucoma.

PubMed

Kim, Ko Eun; Jeoung, Jin Wook; Park, Ki Ho; Kim, Dong Myung; Kim, Seok Hwan

2015-03-01

To investigate the rate and associated factors of false-positive diagnostic classification of ganglion cell analysis (GCA) and retinal nerve fiber layer (RNFL) maps, and characteristic false-positive patterns on optical coherence tomography (OCT) deviation maps. Prospective, cross-sectional study. A total of 104 healthy eyes of 104 normal participants. All participants underwent peripapillary and macular spectral-domain (Cirrus-HD, Carl Zeiss Meditec Inc, Dublin, CA) OCT scans. False-positive diagnostic classification was defined as yellow or red color-coded areas for GCA and RNFL maps. Univariate and multivariate logistic regression analyses were used to determine associated factors. Eyes with abnormal OCT deviation maps were categorized on the basis of the shape and location of abnormal color-coded area. Differences in clinical characteristics among the subgroups were compared. (1) The rate and associated factors of false-positive OCT maps; (2) patterns of false-positive, color-coded areas on the GCA deviation map and associated clinical characteristics. Of the 104 healthy eyes, 42 (40.4%) and 32 (30.8%) showed abnormal diagnostic classifications on any of the GCA and RNFL maps, respectively. Multivariate analysis revealed that false-positive GCA diagnostic classification was associated with longer axial length and larger fovea-disc angle, whereas longer axial length and smaller disc area were associated with abnormal RNFL maps. Eyes with abnormal GCA deviation map were categorized as group A (donut-shaped round area around the inner annulus), group B (island-like isolated area), and group C (diffuse, circular area with an irregular inner margin in either). The axial length showed a significant increasing trend from group A to C (P=0.001), and likewise, the refractive error was more myopic in group C than in groups A (P=0.015) and B (P=0.014). Group C had thinner average ganglion cell-inner plexiform layer thickness compared with other groups (group A=B>C, P=0.004). Abnormal OCT diagnostic classification should be interpreted with caution, especially in eyes with long axial lengths, large fovea-disc angles, and small optic discs. Our findings suggest that the characteristic patterns of OCT deviation map can provide useful clues to distinguish glaucomatous changes from false-positive findings. Copyright © 2015 American Academy of Ophthalmology. Published by Elsevier Inc. All rights reserved.

Cardiac imaging at 7 Tesla: Single- and two-spoke radiofrequency pulse design with 16-channel parallel excitation.

PubMed

Schmitter, Sebastian; DelaBarre, Lance; Wu, Xiaoping; Greiser, Andreas; Wang, Dingxin; Auerbach, Edward J; Vaughan, J Thomas; Uğurbil, Kâmil; Van de Moortele, Pierre-François

2013-11-01

Higher signal to noise ratio (SNR) and improved contrast have been demonstrated at ultra-high magnetic fields (≥7 Tesla [T]) in multiple targets, often with multi-channel transmit methods to address the deleterious impact on tissue contrast due to spatial variations in B1 (+) profiles. When imaging the heart at 7T, however, respiratory and cardiac motion, as well as B0 inhomogeneity, greatly increase the methodological challenge. In this study we compare two-spoke parallel transmit (pTX) RF pulses with static B1 (+) shimming in cardiac imaging at 7T. Using a 16-channel pTX system, slice-selective two-spoke pTX pulses and static B1 (+) shimming were applied in cardiac CINE imaging. B1 (+) and B0 mapping required modified cardiac triggered sequences. Excitation homogeneity and RF energy were compared in different imaging orientations. Two-spoke pulses provide higher excitation homogeneity than B1 (+) shimming, especially in the more challenging posterior region of the heart. The peak value of channel-wise RF energy was reduced, allowing for a higher flip angle, hence increased tissue contrast. Image quality with two-spoke excitation proved to be stable throughout the entire cardiac cycle. Two-spoke pTX excitation has been successfully demonstrated in the human heart at 7T, with improved image quality and reduced RF pulse energy when compared with B1 (+) shimming. Copyright © 2013 Wiley Periodicals, Inc.

Mapping of stripe rust resistance QTL in Cappelle-Desprez × PBW343 RIL population effective in northern wheat belt of India.

PubMed

Pawar, Sushma Kumari; Sharma, Davinder; Duhan, Joginder Singh; Saharan, Mahender Singh; Tiwari, Ratan; Sharma, Indu

2016-06-01

Stripe rust caused by Puccinia striiformis f. sp. tritici is most important and devastating disease of wheat worldwide, which affects the grain yields, quality and nutrition. To elucidate, the genetic basis of resistance, a mapping population of recombinant inbred lines was developed from a cross between resistant Cappelle-Desprez and susceptible cultivar PBW343 using single-seed descent. Variety PBW343 had been one of the most popular cultivars of North Western Plains Zone, for more than a decade, before succumbing to the stripe rust. Cappelle-Desprez, a source of durable adult plant resistance, has maintained its resistance against stripe rust for a long time in Europe. Map construction and QTL analysis were completed with 1012 polymorphic (DArT and SSR) markers. Screenings for stripe rust disease were carried out in field condition for two consecutive crop seasons (2012-2013 and 2013-2014). Susceptible parent (PBW343) achieved a significant level of disease i.e., 100 % in both the years. In present investigations, resistance in Cappelle-Desprez was found stable and response to the rust ranged from 0 to 1.5 % over the years. The estimated broad-sense heritability (h 2 ) of stripe rust rAUDPC in the mapping population was 0.82. The relative area under the disease progress curve data showed continuous distributions, indicating that trait was controlled multigenically. Genomic region identified on chromosome 2D, was located within the short arm, with flanking markers (Xgwm484-Xcfd73), explained phenotypic variation (PVE) ranged from 13.9 to 31.8 %. The genomic region identified on chromosome 5B was found with the effect of maximum contribution with flanking DArT markers (1376633|F|0-1207571|F|0), PVE ranged from 24 to 27.0 %. This can, therefore, be utilized for marker assisted selection in developing much needed stripe rust resistant lines for the northern wheat belt of India.

First USGS urban seismic hazard maps predict the effects of soils

USGS Publications Warehouse

Cramer, C.H.; Gomberg, J.S.; Schweig, E.S.; Waldron, B.A.; Tucker, K.

2006-01-01

Probabilistic and scenario urban seismic hazard maps have been produced for Memphis, Shelby County, Tennessee covering a six-quadrangle area of the city. The nine probabilistic maps are for peak ground acceleration and 0.2 s and 1.0 s spectral acceleration and for 10%, 5%, and 2% probability of being exceeded in 50 years. Six scenario maps for these three ground motions have also been generated for both an M7.7 and M6.2 on the southwest arm of the New Madrid seismic zone ending at Marked Tree, Arkansas. All maps include the effect of local geology. Relative to the national seismic hazard maps, the effect of the thick sediments beneath Memphis is to decrease 0.2 s probabilistic ground motions by 0-30% and increase 1.0 s probabilistic ground motions by ???100%. Probabilistic peak ground accelerations remain at levels similar to the national maps, although the ground motion gradient across Shelby County is reduced and ground motions are more uniform within the county. The M7.7 scenario maps show ground motions similar to the 5%-in-50-year probabilistic maps. As an effect of local geology, both M7.7 and M6.2 scenario maps show a more uniform seismic ground-motion hazard across Shelby County than scenario maps with constant site conditions (i.e., NEHRP B/C boundary).

Characterization of the quantitative trait locus OilA1 for oil content in Brassica napus.

PubMed

Chen, Yubo; Qi, Lu; Zhang, Xiaoyu; Huang, Jixiang; Wang, Jibian; Chen, Hongcheng; Ni, Xiyuan; Xu, Fei; Dong, Yanjun; Xu, Haiming; Zhao, Jianyi

2013-10-01

Increasing seed oil content has become one of the most important breeding criteria in rapeseed (Brassica napus). However, oil content is a complex quantitative trait. QTL mapping in a double haploid population (SG population) emerging from a cross between a German (Sollux) and Chinese (Gaoyou) cultivars revealed one QTL for oil content on linkage group A1 (OilA1), which was mapped to a 17 cM genetic interval. To further validate and characterize the OilA1, we constructed a high-resolution map using B. rapa sequence resources and developed a set of near-isogenic lines (NILs) by employing a DH line SG-DH267 as donor and Chinese parent Gaoyou as recurrent background. The results showed highly conserved synteny order between B. rapa and B. napus within the linkage group A1 and revealed a possible centromere region between two markers ZAASA1-38 and NTP3 (2.5 cM). OilA1 was firstly validated by 250 BC5F2 plants and was confirmed in a 10.6 cM interval between the markers ZAASA1-47 and ZAASA1-77. Further substitution mapping was conducted by using two generations of QTL-NILs, 283 lines from eight BC5F3:4 families and 428 plants from six BC5F4 sub-NILs and thus narrowed the OilA1 interval to 6.9 cM and 4.3 cM (1.4 Mb), respectively. Field investigations with two replications using homozygous BC5F3:4 sister sub-NILs indicated that NILs, which carry a Sollux chromosome segment across the target region showed significant higher oil content (1.26 %, p < 0.001) than their sister NILs containing Gaoyou chromosome. The OilA1 locus is of particular interest for breeding purpose in China because 80 % of Chinese cultivars do not carry this desirable allele.

Characterization of molecular diversity and genome-wide mapping of loci associated with resistance to stripe rust and stem rust in Ethiopian bread wheat accessions.

PubMed

Muleta, Kebede T; Rouse, Matthew N; Rynearson, Sheri; Chen, Xianming; Buta, Bedada G; Pumphrey, Michael O

2017-08-04

The narrow genetic basis of resistance in modern wheat cultivars and the strong selection response of pathogen populations have been responsible for periodic and devastating epidemics of the wheat rust diseases. Characterizing new sources of resistance and incorporating multiple genes into elite cultivars is the most widely accepted current mechanism to achieve durable varietal performance against changes in pathogen virulence. Here, we report a high-density molecular characterization and genome-wide association study (GWAS) of stripe rust and stem rust resistance in 190 Ethiopian bread wheat lines based on phenotypic data from multi-environment field trials and seedling resistance screening experiments. A total of 24,281 single nucleotide polymorphism (SNP) markers filtered from the wheat 90 K iSelect genotyping assay was used to survey Ethiopian germplasm for population structure, genetic diversity and marker-trait associations. Upon screening for field resistance to stripe rust in the Pacific Northwest of the United States and Ethiopia over multiple growing seasons, and against multiple races of stripe rust and stem rust at seedling stage, eight accessions displayed resistance to all tested races of stem rust and field resistance to stripe rust in all environments. Our GWAS results show 15 loci were significantly associated with seedling and adult plant resistance to stripe rust at false discovery rate (FDR)-adjusted probability (P) <0.10. GWAS also detected 9 additional genomic regions significantly associated (FDR-adjusted P < 0.10) with seedling resistance to stem rust in the Ethiopian wheat accessions. Many of the identified resistance loci were mapped close to previously identified rust resistance genes; however, three loci on the short arms of chromosomes 5A and 7B for stripe rust resistance and two on chromosomes 3B and 7B for stem rust resistance may be novel. Our results demonstrate that considerable genetic variation resides within the landrace accessions that can be utilized to broaden the genetic base of rust resistance in wheat breeding germplasm. The molecular markers identified in this study should be useful in efficiently targeting the associated resistance loci in marker-assisted breeding for rust resistance in Ethiopia and other countries.

TH-CD-BRA-03: Direct Measurement of Magnetic Field Correction Factors, KQB, for Application in Future Codes of Practice for Reference Dosimetry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wolthaus, J; Asselen, B van; Woodings, S

2016-06-15

Purpose: With an MR-linac, radiation is delivered in the presence of a magnetic field. Modifications in the codes of practice (CoPs) for reference dosimetry are required to incorporate the effect of the magnetic field. Methods: In most CoPs the absorbed dose is determined using the well-known kQ formalism as the product of the calibration coefficient, the corrected electrometer reading and kQ, to account for the difference in beam quality. To keep a similar formalism a single correction factor is introduced which replaces kQ, and which corrects for beam quality and B-field, kQ,B. In this study we propose a method tomore » determine kQ,B under reference conditions in the MRLinac without using a primary standard, as the product of:- the ratio between detector readings without and with B-field (kB),- the ratio between doses in the point of measurement with and without B-field (rho),- kQ in the absence of the B-field in the MRLinac beam (kQmrl0,Q0),The ratio of the readings, which covers the change in detector reading due to the different electron trajectories in the detector, was measured with a waterproof ionization chamber (IBA-FC65g) in a water phantom in the MRLinac without and with B-field. The change in dose-to-water in the point of measurement due to the B-field was determined with a Monte Carlo based TPS. Results: For the presented approach, the measured ratio of readings is 0.956, the calculated ratio of doses in the point of measurement is 0.995. Based on TPR20,10 measurements kQ was calculated as 0.989 using NCS-18. This yields a value of 0.9408 for kQ,B. Conclusion: The presented approach to determine kQ,B agrees with a method based on primary standards within 0.4% with an uncertainty of 1% (1 std.uncert). It differs from a similar approach using a PMMA-phantom and an NE2571 chamber with 1.3%.« less

Wide-field 12CO (J=2-1) and 13CO (J=2-1) Observations toward the Aquila Rift and Serpens Molecular Cloud Complexes. I. Molecular Clouds and Their Physical Properties

NASA Astrophysics Data System (ADS)

Nakamura, Fumitaka; Dobashi, Kazuhito; Shimoikura, Tomomi; Tanaka, Tomohiro; Onishi, Toshikazu

2017-03-01

We present the results of wide-field 12CO (J=2{--}1) and 13CO (J=2{--}1) observations toward the Aquila Rift and Serpens molecular cloud complexes (25^\\circ < l< 33^\\circ and 1^\\circ < b< 6^\\circ ) at an angular resolution of 3.‧4 (≈ 0.25 pc) and at a velocity resolution of 0.079 km s-1 with velocity coverage of -5 {km} {{{s}}}-1< {V}{LSR}< 35 {km} {{{s}}}-1. We found that the 13CO emission better traces the structures seen in the extinction map, and derived the {X}{13{CO}}-factor of this region. Applying SCIMES to the 13CO data cube, we identified 61 clouds and derived their mass, radii, and line widths. The line width-radius relation of the identified clouds basically follows those of nearby molecular clouds. The majority of the identified clouds are close to virial equilibrium, although the dispersion is large. By inspecting the 12CO channel maps by eye, we found several arcs that are spatially extended to 0.°2-3° in length. In the longitude-velocity diagrams of 12CO, we also found two spatially extended components that appear to converge toward Serpens South and the W40 region. The existence of two components with different velocities and arcs suggests that large-scale expanding bubbles and/or flows play a role in the formation and evolution of the Serpens South and W40 cloud.

Magma reservoir subsidence mechanics: Theoretical summary and application to Kilauea Volcano, Hawaii

NASA Astrophysics Data System (ADS)

Ryan, Michael P.; Blevins, James Y. K.; Okamura, Arnold T.; Koyanagi, Robert Y.

1983-05-01

An analytic model has been developed for the prediction of the three-dimensional deformation field generated by the withdrawal of magma from a sill-like storage compartment during an intrusion or eruption cycle. The model is based on the work of Berry and Sales (1961, 1962) and predicts the vertical displacement components over the areal plane. Model parameters are the depth of burial h, the intrusion half width a, the intrusion half length b, the thickness of the magmatic interior at the moment of melt withdrawal tm, and the planform aspect ratio ξ = a/b. The products of the model include areal deformation maps. Systematic variation in model parameters within the context of Kilauea Volcano, Hawaii, have revealed that circular and elliptical deformation patterns result from the collapse of draining rectilinear intrusions at depth. Moreover, the geometric parameters of a storage compartment may interact in complex ways to produce similar deformation patterns. The model has been applied to Kilauea Volcano for three periods of pronounced summit subsidence: (1) 1921-1927 (bracketing the steamblast eruptive phases of 1924); (2) June 1972 to December 1972, and (3) December 1972 to May 1973. Application of the model requires the simultaneous optimization of five predicted deformation features with respect to field measurements and the derivative deformation maps: (1) the vertical displacement maxima; (2) the vertical displacement gradients over the areal plane, (3) the lateral extent of the deformation field, (4) the aspect ratio of the subsidence pattern, and (5) the strike of the major axis of the deformation field. The constrained geometries and volumes of the inferred collapsed storage cavities for each period are (1) 1921-1927: depth ≅ 3 km, a ≅ 1500 m, b ≅ 4500 m, tm ≅ 20 m, V 540×106 m3, (2) June 1972 to December 1972: depth ≅ 3.3 km, a ≅ 600 m, b ≅ 2000 m, tm ≅ 1 m, V ≅ 4.8×106 m3, and (3) December 1972 to May 1973: depth ≅ 2.2 km, a ≅ 500 m, b ≅ 1612 m, tm ≅ 1 m, V ≅ 3.2×106 m3. For 2 and 3, calculated magmatic thicknesses tm happen to be in the range (3.48-0.15 m) of measurements for sill-like bodies in deeply dissected Hawaiian shield volcanoes. The fits obtained between calculated and observed deformation patterns allow quantification of the location, overall dimensions, orientation, and volume of the discrete, still molten, interior of sill-like compartments from which magma is tapped during eruption or intrusion.

Magneto-photocurrent in organic photovoltaic cells; the effect of short-lived charge transfer states

NASA Astrophysics Data System (ADS)

Ehrenfreund, Eitan; Devir-Wolfman, A.; Khachatryan, B.; Gautam, B.; Tessler, N.; Vardeny, Z. V.

2014-03-01

The spin degrees of freedom are responsible for the magnetic field effects in organic devices at low magnetic fields. The MFE is formed via a variety of spin-mixing mechanisms, such as the hyperfine (typical strength: Bhf<0.003 T), triplet-polaron or triplet-triplet (Btrip<0.1 T) interactions, that limit the response by their respective strength. We report on magneto-photocurrent (MPC) response of bulk hetero-junction organic photovoltaic cells in an extended field range B =0.00005 - 8 Tesla, and found that spin mixing mechanisms are still operative even at the highest fields. In fact, the response MPC(B) can be divided into three main regions, each with a different sign: sharp response that increases with B up to B1 ~ 0.04 T; broad response that decreases with B in the range from B1 to B2 ~ 0.3-0.7 T; and even broader response that increases above B2; this response does not saturate even at 8.5 T. We attribute the latter MPC component to short-lived charge transfer excitons (CTE) where spin-mixing is caused by the difference of the donor/acceptor g factors; a mechanism that is increasingly more effective at high magnetic field. Supported by the US-Israel BSF.

Simultaneous Measurement of T2 and Apparent Diffusion Coefficient (T2+ADC) in the Heart With Motion-Compensated Spin Echo Diffusion-Weighted Imaging

PubMed Central

Aliotta, Eric; Moulin, Kévin; Zhang, Zhaohuan; Ennis, Daniel B.

2018-01-01

Purpose To evaluate a technique for simultaneous quantitative T2 and apparent diffusion coefficient (ADC) mapping in the heart (T2+ADC) using spin echo (SE) diffusion-weighted imaging (DWI). Theory and Methods T2 maps from T2+ADC were compared with single-echo SE in phantoms and with T2-prepared (T2-prep) balanced steady-state free precession (bSSFP) in healthy volunteers. ADC maps from T2+ADC were compared with conventional DWI in phantoms and in vivo. T2+ADC was also demonstrated in a patient with acute myocardial infarction (MI). Results Phantom T2 values from T2+ADC were closer to a single-echo SE reference than T2-prep bSSFP (−2.3 ± 6.0% vs 22.2 ± 16.3%; P < 0.01), and ADC values were in excellent agreement with DWI (0.28 ± 0.4%). In volunteers, myocardial T2 values from T2+ADC were significantly shorter than T2-prep bSSFP (35.8 ± 3.1 vs 46.8 ± 3.8 ms; P < 0.01); myocardial ADC was not significantly (N.S.) different between T2+ADC and conventional motion-compensated DWI (1.39 ± 0.18 vs 1.38 ± 0.18 mm2/ms; P = N.S.). In the patient, T2 and ADC were both significantly elevated in the infarct compared with remote myocardium (T2: 40.4 ± 7.6 vs 56.8 ± 22.0; P < 0.01; ADC: 1.47 ± 0.59 vs 1.65 ± 0.65 mm2/ms; P < 0.01). Conclusion T2+ADC generated coregistered, free-breathing T2 and ADC maps in healthy volunteers and a patient with acute MI with no cost in accuracy, precision, or scan time compared with DWI. PMID:28516485

Hα Intensity Map of the Repeating Fast Radio Burst FRB 121102 Host Galaxy from Subaru/Kyoto 3DII AO-assisted Optical Integral-field Spectroscopy

NASA Astrophysics Data System (ADS)

Kokubo, Mitsuru; Mitsuda, Kazuma; Sugai, Hajime; Ozaki, Shinobu; Minowa, Yosuke; Hattori, Takashi; Hayano, Yutaka; Matsubayashi, Kazuya; Shimono, Atsushi; Sako, Shigeyuki; Doi, Mamoru

2017-08-01

We present the Hα intensity map of the host galaxy of the repeating fast radio burst FRB 121102 at a redshift of z = 0.193 obtained with the AO-assisted Kyoto 3DII optical integral-field unit mounted on the 8.2 m Subaru Telescope. We detected a compact Hα-emitting (I.e., star-forming) region in the galaxy, which has a much smaller angular size (< 0\\buildrel{\\prime\\prime}\\over{.} 57 (1.9 kpc) at full width at half maximum (FWHM)) than the extended stellar continuum emission region determined by the Gemini/GMOS z\\prime -band image (≃ 1\\buildrel{\\prime\\prime}\\over{.} 4 (4.6 kpc) at FWHM with ellipticity b/a=0.45). The spatial offset between the centroid of the Hα emission region and the position of the radio bursts is 0\\buildrel{\\prime\\prime}\\over{.} 08+/- 0\\buildrel{\\prime\\prime}\\over{.} 02 (0.26 ± 0.07 kpc), indicating that FRB 121102 is located within the star-forming region. This close spatial association of FRB 121102 with the star-forming region is consistent with expectations from young pulsar/magnetar models for FRB 121102, and it also suggests that the observed Hα emission region can make a major dispersion measure (DM) contribution to the host galaxy DM component of FRB 121102. Nevertheless, the largest possible value of the DM contribution from the Hα emission region inferred from our observations still requires a significant amount of ionized baryons in intergalactic medium (IGM; the so-called “missing” baryons) as the DM source of FRB 121102, and we obtain a 90% confidence level lower limit on the cosmic baryon density in the IGM in the low-redshift universe as {{{Ω }}}{IGM}> 0.012. Based on data collected at Subaru Telescope, which is operated by the National Astronomical Observatory of Japan.

Digital Geologic Mapping and Integration with the Geoweb: The Death Knell for Exclusively Paper Geologic Maps

NASA Astrophysics Data System (ADS)

House, P. K.

2008-12-01

The combination of traditional methods of geologic mapping with rapidly developing web-based geospatial applications ('the geoweb') and the various collaborative opportunities of web 2.0 have the potential to change the nature, value, and relevance of geologic maps and related field studies. Parallel advances in basic GPS technology, digital photography, and related integrative applications provide practicing geologic mappers with greatly enhanced methods for collecting, visualizing, interpreting, and disseminating geologic information. Even a cursory application of available tools can make field and office work more enriching and efficient; whereas more advanced and systematic applications provide new avenues for collaboration, outreach, and public education. Moreover, they ensure a much broader audience among an immense number of internet savvy end-users with very specific expectations for geospatial data availability. Perplexingly, the geologic community as a whole is not fully exploring this opportunity despite the inevitable revolution in portends. The slow acceptance follows a broad generational trend wherein seasoned professionals are lagging behind geology students and recent graduates in their grasp of and interest in the capabilities of the geoweb and web 2.0 types of applications. Possible explanations for this include: fear of the unknown, fear of learning curve, lack of interest, lack of academic/professional incentive, and (hopefully not) reluctance toward open collaboration. Although some aspects of the expanding geoweb are cloaked in arcane computer code, others are extremely simple to understand and use. A particularly obvious and simple application to enhance any field study is photo geotagging, the digital documentation of the locations of key outcrops, illustrative vistas, and particularly complicated geologic field relations. Viewing geotagged photos in their appropriate context on a virtual globe with high-resolution imagery can be an extremely useful accompaniment to compilation of field mapping efforts. It can also complement published geologic maps by vastly improving their comprehensibility when field photos, and specific notes can be viewed interactively with them. Other useful applications include GPS tracking/documentation of field traverses; invoking multiple geologic layers; 3-D visualizations of terrain and structure; and online collaboration with colleagues via blogs or wikis. Additional steps towards collaborative geologic mapping on the web may also enhance efficient and open sharing of data and ideas. Geologists are well aware that paper geologic maps can convey tremendous amounts of information. Digital geologic maps linked via a virtual globe with field data, diverse imagery, historical photographs, explanatory diagrams, and 3-D models convey a much greater amount of information and can provide a much richer context for comprehension and interpretation. They can also serve as an efficient, entertaining, and potentially compelling mechanism for fostering inspiration in the minds of budding (and aging) geologists.

VIMOS integral field spectroscopy of blue compact galaxies. I. Morphological properties, diagnostic emission-line ratios, and kinematics

NASA Astrophysics Data System (ADS)

Cairós, L. M.; Caon, N.; Weilbacher, P. M.

2015-05-01

Context. Blue compact galaxies (BCG) are gas-rich, low-luminosity, low-metallicity systems that undergo a violent burst of star formation. These galaxies offer us a unique opportunity to investigate collective star formation and its effects on galaxy evolution in a relatively simple environment. Spatially resolved spectrophotometric studies of BCGs are essential for a better understanding of the role of starburst-driven feedback processes on the kinematical and chemical evolution of low-mass galaxies near and far. Aims: We carry out an integral field spectroscopic study of a sample of BCGs, with the aim of probing the morphology, kinematics, dust extinction, and excitation mechanisms of their warm interstellar medium. Methods: Eight BCGs were observed with the VIMOS integral field unit at the Very Large Telescope using blue and orange grisms in high-resolution mode. At a spatial sampling of 0''&dotbelow;67 per spaxel, we covered about 30″ × 30″ on the sky, with a wavelength range of 4150...7400 Å. Emission lines were fitted with a single Gaussian profile to measure their wavelength, flux, and width. From these data we built two-dimensional maps of the continuum and the most prominent emission-lines, as well as diagnostic line ratios, extinction, and kinematic maps. Results: An atlas has been produced with the following: emission-line fluxes and continuum emission; ionization, interstellar extinction, and electron density maps from line ratios; velocity and velocity dispersion fields. From integrated spectroscopy, it includes tables of the extinction corrected line fluxes and equivalent widths, diagnostic-line ratios, physical parameters, and the abundances for the brightest star-forming knots and for the whole galaxy. Based on observations made with ESO Telescopes at the Paranal Observatory under program ID 079.B-0445.The reduced datacubes and their error maps (FITS files) are only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (ftp://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/577/A21

Magnetic Doppler imaging of the chemically peculiar star HD 125248

NASA Astrophysics Data System (ADS)

Rusomarov, N.; Kochukhov, O.; Ryabchikova, T.; Ilyin, I.

2016-04-01

Context. Intermediate-mass, chemically peculiar stars with strong magnetic fields provide an excellent opportunity to study the topology of their surface magnetic fields and the interplay between magnetic geometries and abundance inhomogeneities in the atmospheres of these stars. Aims: We reconstruct detailed maps of the surface magnetic field and abundance distributions for the magnetic Ap star HD 125248. Methods: We performed the analysis based on phase-resolved, four Stokes parameter spectropolarimetric observations obtained with the HARPSpol instrument. These data were interpreted with the help of magnetic Doppler imaging techniques and model atmospheres taking the effects of strong magnetic fields and nonsolar chemical composition into account. Results: We improved the atmospheric parameters of the star, Teff = 9850 ± 250 K and log g = 4.05 ± 0.10. We performed detailed abundance analysis, which confirmed that HD 125248 has abundances typical of other Ap stars, and discovered significant vertical stratification effects for the Fe II and Cr II ions. We computed LSD Stokes profiles using several line masks corresponding to Fe-peak and rare earth elements, and studied their behavior with rotational phase. Combining previous longitudinal field measurements with our own observations, we improved the rotational period of the star Prot = 9.29558 ± 0.00006 d. Magnetic Doppler imaging of HD 125248 showed that its magnetic field is mostly poloidal and quasi-dipolar with two large spots of different polarity and field strength. The chemical maps of Fe, Cr, Ce, Nd, Gd, and Ti show abundance contrasts of 0.9-3.5 dex. Among these elements, the Fe abundance map does not show high-contrast features. Cr is overabundant around the negative magnetic pole and has 3.5 dex abundance range. The rare earth elements and Ti are overabundant near the positive magnetic pole. Conclusions: The magnetic field of HD 125248 has strong deviations from the classical oblique dipole field geometry. A comparison of the magnetic field topology of HD 125248 with the results derived for other stars using four Stokes magnetic Doppler imaging suggests evidence that the field topology becomes simpler with increasing age. The abundance maps show weak correlation with magnetic field geometry, but they do not agree with the theoretical atomic diffusion calculations, which predict element accumulation in the horizontal field regions. Based on observations collected at the European Southern Observatory, Chile (ESO programs 088.D-0066, 090.D-0256).

Diagnostic performance of qualitative shear-wave elastography according to different color map opacities for breast masses.

PubMed

Kim, Hana; Youk, Ji Hyun; Gweon, Hye Mi; Kim, Jeong-Ah; Son, Eun Ju

2013-08-01

To compare the diagnostic performance of qualitative shear-wave elastography (SWE) according to three different color map opacities for breast masses 101 patients aged 21-77 years with 113 breast masses underwent B-mode US and SWE under three different color map opacities (50%, 19% and 100%) before biopsy or surgery. Following SWE features were reviewed: visual pattern classification (pattern 1-4), color homogeneity (Ehomo) and six-point color score of maximum elasticity (Ecol). Combined with B-mode US and SWE, the likelihood of malignancy (LOM) was also scored. The area under the curve (AUC) was obtained by ROC curve analysis to assess the diagnostic performance under each color opacity. A visual color pattern, Ehomo, Ecol and LOM scoring were significantly different between benign and malignant lesions under all color opacities (P<0.001). For 50% opacity, AUCs of visual color pattern, Ecol, Ehomo and LOM scoring were 0.902, 0.951, 0.835 and 0.975. But, for each SWE feature, there was no significant difference in the AUC among three different color opacities. For all color opacities, visual color pattern and Ecol showed significantly higher AUC than Ehomo. In addition, a combined set of B-mode US and SWE showed significantly higher AUC than SWE alone for color patterns, Ehomo, but no significant difference was found in Ecol. Qualitative SWE was useful to differentiate benign from malignant breast lesion under all color opacities. The difference in color map opacity did not significantly influence diagnostic performance of SWE. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Implementation of a Configurable Fault Tolerant Processor (CFTP)

DTIC Science & Technology

2003-03-01

internal structure ARCHITECTURE rtl OF log_barrel IS signal sel1, sel2, sel3, sel4 : std_logic_vector ( 1 downto 0); signal buf0b, buf0c...sel3(1) <= l_or_r and shift(2); sel3(0) <= ar_or_log and shift(2); sel4 (1) <= l_or_r and shift(3); sel4 (0) <= ar_or_log and shift(3); buf0b...out_word => buf3a ); mux4: word_mux4 port map ( a => buf3a, b => buf3b, c => buf3c, d => buf3d, sel => sel4

Geology of the Harper Quadrangle, Liberia

USGS Publications Warehouse

Brock, M.R.; Chidester, A.H.; Baker, M.G.W.

1974-01-01

As part of a program undertaken cooperatively by the Liberian Geological Survey (LGS) and the U. S. Geological Survey (USGS), under the sponsorship of the Government of Liberia and the Agency for International Development, U. S. Department of State, Liberia was mapped by geologic and geophysical methods during the period 1965 to 1972. The resulting geologic and geophysical maps are published in ten folios, each covering one quadrangle (see index map). The first systematic mapping in the Harper quadrangle was by Baker, S. P. Srivastava, and W. E. Stewart (LGS) at a scale of 1:500,000 in the vicinity of Harper in the southeastern, and of Karloke in the northeastern part of the quadrangle in 1960-61. Brock and Chidester carried out systematic mapping of the quadrangle at a scale of 1:250,000 in the period September 1971-May 1972; the geologic map was compiled from field data gathered by project geologists and private companies as indicated in the source diagram, photogeologic maps, interpretation of airborne magnetic and radiometric surveys, field mapping, and ground-based radiometric surveys in which hand-held scintillators were used. R. W. Bromery, C. S. Wotorson, and J. C. Behrendt contributed to the interpretation of geophysical data. Total-intensity aeromagnetic and total-count gamma radiation maps (Behrendt and Wotorson, in press a, b), and unpublished data derived from those maps, including the near-surface and the regional magnetic components and aeromagnetic/radiometric correlations, were used in the interpretation.

The structural diversity of ABS{sub 3} compounds with d{sup 0} electronic configuration for the B-cation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brehm, John A., E-mail: brehmj@sas.upenn.edu; Bennett, Joseph W.; Schoenberg, Michael Rutenberg

2014-06-14

We use first-principles density functional theory within the local density approximation to ascertain the ground state structure of real and theoretical compounds with the formula ABS{sub 3} (A = K, Rb, Cs, Ca, Sr, Ba, Tl, Sn, Pb, and Bi; and B = Sc, Y, Ti, Zr, V, and Nb) under the constraint that B must have a d{sup 0} electronic configuration. Our findings indicate that none of these AB combinations prefer a perovskite ground state with corner-sharing BS{sub 6} octahedra, but that they prefer phases with either edge- or face-sharing motifs. Further, a simple two-dimensional structure field map createdmore » from A and B ionic radii provides a neat demarcation between combinations preferring face-sharing versus edge-sharing phases for most of these combinations. We then show that by modifying the common Goldschmidt tolerance factor with a multiplicative term based on the electronegativity difference between A and S, the demarcation between predicted edge-sharing and face-sharing ground state phases is enhanced. We also demonstrate that, by calculating the free energy contribution of phonons, some of these compounds may assume multiple phases as synthesis temperatures are altered, or as ambient temperatures rise or fall.« less

BA3b and BA1 activate in a serial fashion after median nerve stimulation: direct evidence from combining source analysis of evoked fields and cytoarchitectonic probabilistic maps.

PubMed

Papadelis, Christos; Eickhoff, Simon B; Zilles, Karl; Ioannides, Andreas A

2011-01-01

This study combines source analysis imaging data for early somatosensory processing and the probabilistic cytoarchitectonic maps (PCMs). Human somatosensory evoked fields (SEFs) were recorded by stimulating left and right median nerves. Filtering the recorded responses in different frequency ranges identified the most responsive frequency band. The short-latency averaged SEFs were analyzed using a single equivalent current dipole (ECD) model and magnetic field tomography (MFT). The identified foci of activity were superimposed with PCMs. Two major components of opposite polarity were prominent around 21 and 31 ms. A weak component around 25 ms was also identified. For the most responsive frequency band (50-150 Hz) ECD and MFT revealed one focal source at the contralateral Brodmann area 3b (BA3b) at the peak of N20. The component ~25 ms was localised in Brodmann area 1 (BA1) in 50-150 Hz. By using ECD, focal generators around 28-30 ms located initially in BA3b and 2 ms later to BA1. MFT also revealed two focal sources - one in BA3b and one in BA1 for these latencies. Our results provide direct evidence that the earliest cortical response after median nerve stimulation is generated within the contralateral BA3b. BA1 activation few milliseconds later indicates a serial mode of somatosensory processing within cytoarchitectonic SI subdivisions. Analysis of non-invasive magnetoencephalography (MEG) data and the use of PCMs allow unambiguous and quantitative (probabilistic) interpretation of cytoarchitectonic identity of activated areas following median nerve stimulation, even with the simple ECD model, but only when the model fits the data extremely well. Copyright © 2010 Elsevier Inc. All rights reserved.

Japanese Magsat Team. A: Crustal structure near Japan and its Antarctic Station. B: Electric currents and hydromagnetic waves in the ionosphere and the magnetosphere

NASA Technical Reports Server (NTRS)

Fukushima, N.; Maeda, H.; Yukutake, T.; Tanaka, M.; Oshima, S.; Ogawa, K.; Kawamura, M.; Miyzaki, Y.; Uyeda, S.; Kobayashi, K. (Principal Investigator)

1981-01-01

Efforts continue in compiling tapes which contain vector and scalar data decimated at an interval of 0.5 sec, together with time and position data. A map of the total force field anomaly around Japan was developed which shows a negative magnetic anomaly in the Okhotsk Sea. Examination of vector residuals from the MGST model shows that the total force perturbation is almost ascribable to the perturbation parallel to the main geomagnetic field and that the contribution from the perturbation transverse to the main field to the total force perturbation is negligibly small. The influences of ionospheric current with equatorial electroject and of the magnetospheric field aligned current on the dawn-dusk asymmetry of daily geomagnetic variations are being considered. The total amount of electric current flowing through the plane of the Magsat orbit loop was calculated by direct application of Maxwell's equation. Results show that the total electric current is 1 to 5 ampheres, and the current direction is either sunward or antisunward.

Spectrally based bathymetric mapping of a dynamic, sand‐bedded channel: Niobrara River, Nebraska, USA

USGS Publications Warehouse

Dilbone, Elizabeth; Legleiter, Carl; Alexander, Jason S.; McElroy, Brandon

2018-01-01

Methods for spectrally based mapping of river bathymetry have been developed and tested in clear‐flowing, gravel‐bed channels, with limited application to turbid, sand‐bed rivers. This study used hyperspectral images and field surveys from the dynamic, sandy Niobrara River to evaluate three depth retrieval methods. The first regression‐based approach, optimal band ratio analysis (OBRA), paired in situ depth measurements with image pixel values to estimate depth. The second approach used ground‐based field spectra to calibrate an OBRA relationship. The third technique, image‐to‐depth quantile transformation (IDQT), estimated depth by linking the cumulative distribution function (CDF) of depth to the CDF of an image‐derived variable. OBRA yielded the lowest depth retrieval mean error (0.005 m) and highest observed versus predicted R2 (0.817). Although misalignment between field and image data did not compromise the performance of OBRA in this study, poor georeferencing could limit regression‐based approaches such as OBRA in dynamic, sand‐bedded rivers. Field spectroscopy‐based depth maps exhibited a mean error with a slight shallow bias (0.068 m) but provided reliable estimates for most of the study reach. IDQT had a strong deep bias but provided informative relative depth maps. Overprediction of depth by IDQT highlights the need for an unbiased sampling strategy to define the depth CDF. Although each of the techniques we tested demonstrated potential to provide accurate depth estimates in sand‐bed rivers, each method also was subject to certain constraints and limitations.

Asteroid (21) Lutetia: Disk-resolved photometric analysis of Baetica region

NASA Astrophysics Data System (ADS)

Hasselmann, P. H.; Barucci, M. A.; Fornasier, S.; Leyrat, C.; Carvano, J. M.; Lazzaro, D.; Sierks, H.

2016-03-01

(21) Lutetia has been visited by Rosetta mission on July 2010 and observed with a phase angle ranging from 0.15° to 156.8°. The Baetica region, located at the north pole has been extensively observed by OSIRIS cameras system. Baetica encompass a region called North Pole Crater Cluster (NPCC), shows a cluster of superposed craters which presents signs of variegation at the small phase angle images. For studying the location, we used 187 images distributed throughout 14 filter recorded by the NAC (Narrow Angle Camera) and WAC (Wide Angle Camera) of the OSIRIS system on-board Rosetta taken during the fly-by. Then, we photometrically modeled the region using Minnaert disk-function and Akimov phase function to obtain a resolved spectral slope map at phase angles of 5 ° and 20 ° . We observed a dichotomy between Gallicum and Danuvius-Sarnus Labes in the NPCC, but no significant phase reddening (- 0.04 ± 0.045 % μm-1deg-1). In the next step, we applied the Hapke (Hapke, B. [2008]. Icarus 195, 918-926; Hapke, B. [2012]. Theory of Reflectance and Emittance Spectroscopy, second ed. Cambridge University Press) model for the NAC F82+F22 (649.2 nm), WAC F13 (375 nm) and WAC F17 (631.6 nm) and we obtained normal albedo maps and Hapke parameter maps for NAC F82+F22. On Baetica, at 649.2 nm, the geometric albedo is 0.205 ± 0.005 , the average single-scattering albedo is 0.181 ± 0.005 , the average asymmetric factor is - 0.342 ± 0.003 , the average shadow-hiding opposition effect amplitude and width are 0.824 ± 0.002 and 0.040 ± 0.0007 , the average roughness slope is 11.45 ° ± 3 ° and the average porosity is 0.85 ± 0.002 . We are unable to confirm the presence of coherent-backscattering mechanism. In the NPCC, the normal albedo variegation among the craters walls reach 8% brighter for Gallicum Labes and 2% fainter for Danuvius Labes. The Hapke parameter maps also show a dichotomy at the opposition effect coefficients, single-scattering albedo and asymmetric factor, that may be attributed to the maturation degree of the regolith or to compositonal variation. In addition, we compared the Hapke (Hapke, B. [2008]. Icarus 195, 918-926; Hapke, B. [2012]. Theory of Reflectance and Emittance Spectroscopy, second ed. Cambridge University Press) and Hapke (Hapke, B. [1993]. Theory of Reflectance and Emittance Spectroscopy) parameters with laboratory samples and other small Solar System bodies visited by space missions.

On Ex Situ NMR: Developing portable low-cost and/or single sided NMR/MRI

DOE Office of Scientific and Technical Information (OSTI.GOV)

Demas, V; Herberg, J; Maxwell, R

2006-06-09

Nuclear magnetic resonance spectroscopy (NMR) is of unsurpassed versatility in its ability to non-destructively probe for chemical identity. Portable, low-cost NMR sensors would enable on site identification of potentially hazardous substances, such as signatures from production of nuclear, chemical, and biological weapon agents, narcotics, explosives, toxins, and poisons. There exist however problems that need to be considered in the case of such sensors: (a) small-scale magnets produce inhomogeneous magnetic fields and therefore undesired Larmor frequency distributions that conceal much of the useful spectral information, and (b) sensitivity in most experiments decreases due to the inherently low and strongly inhomogeneous fieldsmore » associated with portable instruments. Our approach is to: (a) try to improve the field of low cost magnets either with hardware (e.g. magnet design and construction of ''shim coils'') or via special pulse sequences, where the field is ''effectively shimmed'' to appear homogeneous to the sample, and (b) to use microcoils to improve sensitivity and to allow focusing in smaller regions and therefore smaller static field variations. We have been working in setting up a table top, 2-Tesla permanent Halbach magnet system for tabletop NMR. The Spectrometer console is a Tecmag Apollo, controlled by a dell notebook. Currently an external linear chemagnetics rf amplifier is being used, though the power requirements for our system are quite low (a few Watts). The Magnetic Resonance lab in LLNL, has developed several types and sizes of microcoils, which have been proven to perform well for NMR experiments. We have evaluated an rf, 360 {micro}m O.D., microcoil probe that was built previously. We have finished mapping the magnetic field of the magnet. In the optimal position (in terms of field quality), the field inhomogeneity was at 17ppm. Preliminary fluorine spectra with a resolved two peak separation have now been obtained. For the field, as mapped, we have initial designs of first degree shimming, or gradient coils (linear correction to the field). We have calculated ''shim pulses'' to effectively shim the mapped field, for ideal gradient coils. These calculations will be repeated after the coils will be built and evaluated.« less

The influence of magnetic field on the cold neutral medium mass fraction and its alignment with density structures

NASA Astrophysics Data System (ADS)

Villagran, M. A.; Gazol, A.

2018-06-01

To contribute to the understanding of the magnetic field's influence on the segregation of cold neutral medium (CNM) in the solar neighbourhood we analyse magnetohydrodynamic simulations that include the main physical characteristics of the local neutral atomic interstellar medium. The simulations have a continuous solenoidal Fourier forcing in a periodic box of 100 pc per side and an initial uniform magnetic field (B_0) with intensities ranging between ˜0.4 and ˜8 μG. Our main results are as follows. (i) The CNM mass fraction diminishes with the increase in magnetic field intensity. (ii) There is a preferred alignment between CNM structures and B in all our B0 range but the preference weakens as B0 increases. It is worth noticing that this preference is also present in two-dimensional projections making an extreme angle (0 or π / 2) with respect to B_0 and it is only lost for the strongest magnetic field when the angle of projection is perpendicular to B_0. (iii) The aforementioned results are prevalent despite the inclusion of self-gravity in our continuously forced simulations with a mean density similar to the average value of the solar neighbourhood. (iv) Given a fixed B0 and slightly higher mean densities, up to double, the effects of self-gravity are still not qualitatively significant.

Tilt optimized flip uniformity (TOFU) RF pulse for uniform image contrast at low specific absorption rate levels in combination with a surface breast coil at 7 Tesla.

PubMed

van Kalleveen, Irene M L; Boer, Vincent O; Luijten, Peter R; Klomp, Dennis W J

2015-08-01

Going to ultrahigh field MRI (e.g., 7 Tesla [T]), the nonuniformity of the B1+ field and the increased radiofrequency (RF) power deposition become challenging. While surface coils improve the power efficiency in B1+, its field remains nonuniform. In this work, an RF pulse was designed that uses the slab selection to compensate the inhomogeneous B1+ field of a surface coil without a substantial increase in specific absorption rate (SAR). A breast surface coil was used with a decaying B1+ field in the anterior-posterior direction of the human breast. Slab selective RF pulses were designed and compared with adiabatic and spokes RF pulses. Proof of principle was demonstrated with FFE and B1+ maps of the human breast. In vivo measurements obtained with the breast surface coil show that the tilt optimized flip uniformity (TOFU) RF pulses can improve the flip angle homogeneity by 31%, while the SAR will be lower compared with BIR-4 and spokes RF pulses. By applying TOFU RF pulses to the breast surface coil, we are able to compensate the inhomogeneous B1+ field, while keeping the SAR low. Therefore stronger T1 -weighting in FFE sequences can be obtained, while pulse durations can remain short, as shown in the human breast at 7T. © 2014 Wiley Periodicals, Inc.

Inversion of Gravity and Magnetic Field Data for Tyrrhena Patera

NASA Technical Reports Server (NTRS)

Milbury, C.; Schubert, G.; Raymond, C. A.; Smrekar, S. E.

2011-01-01

Tyrrhena Patera is located to the southeast/northeast of the Isidis/Hellas impact basin. It was geologically active into the Late Amazonian, although the main edifice was formed in the Noachian(approximately 3.7-4.0 Ga). Tyrrhena Patera and the surrounding area contain gravity and magnetic anomalies that appear to be correlated. The results presented here are for the anomalies 1a and 1b (closest to Tyrrhena Patera), however other anomalies in this region have been modeled and will be presented at the conference.The Mars Global Surveyor (MGS) free-air gravity signature of Tyrrhena Patera has been studied by Kiefer, who inferred the existence of an extinct magma chamber below it. The magnetic signature has been mapped by Lillis R. J. et al., who compared electron reflectometer data, analogous to the total magnetic field, for Syrtis Major and Tyrrhena Patera and argued for demagnetization of both volcanoes.

'Nano-immuno test' for the detection of live Mycobacterium avium subspecies paratuberculosis bacilli in the milk samples using magnetic nano-particles and chromogen.

PubMed

Singh, Manju; Singh, Shoor Vir; Gupta, Saurabh; Chaubey, Kundan Kumar; Stephan, Bjorn John; Sohal, Jagdip Singh; Dutta, Manali

2018-04-26

Early rapid detection of Mycobacterium avium subspecies paratuberculosis (MAP) bacilli in milk samples is the major challenge since traditional culture method is time consuming and laboratory dependent. We report a simple, sensitive and specific nano-technology based 'Nano-immuno test' capable of detecting viable MAP bacilli in the milk samples within 10 h. Viable MAP bacilli were captured by MAP specific antibody-conjugated magnetic nano-particles using resazurin dye as chromogen. Test was optimized using true culture positive (10-bovine and 12-goats) and true culture negative (16-bovine and 25-goats) raw milk samples. Domestic livestock species in India are endemically infected with MAP. After successful optimization, sensitivity and specificity of the 'nano-immuno test' in goats with respect to milk culture was 91.7% and 96.0%, respectively. Whereas, it was 90.0% (sensitivity) and 92.6% (specificity) with respect to IS900 PCR. In bovine milk samples, sensitivity and specificity of 'nano-immuno test' with respect to milk culture was 90.0% and 93.7%, respectively. However, with respect to IS900 PCR, the sensitivity and specificity was 88.9% and 94.1%, respectively. Test was validated with field raw milk samples (goats-258 and bovine-138) collected from domestic livestock species to detect live/viable MAP bacilli. Of 138 bovine raw milk samples screened by six diagnostic tests, 81 (58.7%) milk samples were positive for MAP infection in one or more than one diagnostic tests. Of 81 (58.7%) positive bovine raw milk samples, only 24 (17.4%) samples were detected positive for the presence of viable MAP bacilli. Of 258 goats raw milk samples screened by six diagnostic tests, 141 (54.6%) were positive for MAP infection in one or more than one test. Of 141 (54.6%) positive raw milk samples from goats, only 48 (34.0%) were detected positive for live MAP bacilli. Simplicity and efficiency of this novel 'nano-immuno test' makes it suitable for wide-scale screening of milk samples in the field. Standardization, validation and re-usability of functionalized nano-particles and the test was successfully achieved in field samples. Test was highly specific, simple to perform and easy to read by naked eyes and does not require laboratory support in the performance of test. Test has potential to be used as screening test to estimate bio-load of MAP in milk samples at National level.

HIGH ENERGY PARTICLE ACCELERATOR

DOEpatents

Courant, E.D.; Livingston, M.S.; Snyder, H.S.

1959-04-14

An improved apparatus is presented for focusing charged particles in an accelerator. In essence, the invention includes means for establishing a magnetic field in discrete sectors along the path of moving charged particles, the magnetic field varying in each sector in accordance with the relation. B = B/ sub 0/ STAln (r-r/sub 0/)/r/sub 0/!, where B/sub 0/ is the value of the magnetic field at the equilibrium orbit of radius r/sub 0/ of the path of the particles, B equals the magnetic field at the radius r of the chamber and n equals the magnetic field gradient index, the polarity of n being abruptly reversed a plurality of times as the particles travel along their arcuate path. With this arrangement, the particles are alternately converged towards the axis of their equillbrium orbit and diverged therefrom in successive sectors with a resultant focusing effect.

Organization of cerebellar and area "y" projections to the nucleus reticularis tegmenti pontis in macaque monkeys.

PubMed

Stanton, G B

2001-04-02

Axonal projections to the nucleus reticularis tegmenti pontis (RTP) were studied in 11 macaque monkeys by mapping axonal degeneration from lesions centered in the dentate and interpositus anterior (IA) nuclei and by mapping anterograde transport of tritiated amino acid precursors injected into the dentate nucleus. Projections from the dentate and IA nuclei overlap in central parts of the body of RTP, but the terminal field of dentate axons extends dorsomedial and rostral to the terminal field of IA axons, and IA terminal fields extend more ventrolaterally. A caudal to rostral topography of projections from each nucleus onto dorsal to ventral parts of RTP was seen. Projections from rostral parts of both nuclei terminate in a sublemniscal part of the nucleus. The topography of dentate and IA projections onto central to ventrolateral RTP appears to match somatotopic maps of these cerebellar nuclei with the somatotopic map of projections to RTP from primary motor cortex. Projections from caudal and ventral parts of the dentate nucleus appear to overlap oculomotor inputs to rostral, dorsal, and medial RTP from the frontal and supplementary eye fields, the superior colliculus, and the oculomotor region of the caudal fastigial nucleus. Projections to the paramedian part of RTP from vestibular area "y" were also found in two cases that correlated with projections to vertical oculomotor motoneurons. The maps of dentate and IA projections onto RTP correlate predictably with maps of dentate and IA projections to the ventrolateral thalamus and subnuclei of the red nucleus that were made from these same cases (Stanton [1980b] J. Comp. Neurol. 192:377-385). Copyright 2001 Wiley-Liss, Inc.

Strategies to improve phase-stability of ultrafast swept source optical coherence tomography for single shot imaging of transient mechanical waves at 16 kHz frame rate

DOE Office of Scientific and Technical Information (OSTI.GOV)

Song, Shaozhen; Wei, Wei; Hsieh, Bao-Yu

We present single-shot phase-sensitive imaging of propagating mechanical waves within tissue, enabled by an ultrafast optical coherence tomography (OCT) system powered by a 1.628 MHz Fourier domain mode-locked (FDML) swept laser source. We propose a practical strategy for phase-sensitive measurement by comparing the phases between adjacent OCT B-scans, where the B-scan contains a number of A-scans equaling an integer number of FDML buffers. With this approach, we show that micro-strain fields can be mapped with ∼3.0 nm sensitivity at ∼16 000 fps. The system's capabilities are demonstrated on porcine cornea by imaging mechanical wave propagation launched by a pulsed UV laser beam, promisingmore » non-contact, real-time, and high-resolution optical coherence elastography.« less

On the interpolation of volumetric water content in research catchments

NASA Astrophysics Data System (ADS)

Dlamini, Phesheya; Chaplot, Vincent

Digital Soil Mapping (DSM) is widely used in the environmental sciences because of its accuracy and efficiency in producing soil maps compared to the traditional soil mapping. Numerous studies have investigated how the sampling density and the interpolation process of data points affect the prediction quality. While, the interpolation process is straight forward for primary attributes such as soil gravimetric water content (θg) and soil bulk density (ρb), the DSM of volumetric water content (θv), the product of θg by ρb, may either involve direct interpolations of θv (approach 1) or independent interpolation of ρb and θg data points and subsequent multiplication of ρb and θg maps (approach 2). The main objective of this study was to compare the accuracy of these two mapping approaches for θv. A 23 ha grassland catchment in KwaZulu-Natal, South Africa was selected for this study. A total of 317 data points were randomly selected and sampled during the dry season in the topsoil (0-0.05 m) for θg by ρb estimation. Data points were interpolated following approaches 1 and 2, and using inverse distance weighting with 3 or 12 neighboring points (IDW3; IDW12), regular spline with tension (RST) and ordinary kriging (OK). Based on an independent validation set of 70 data points, OK was the best interpolator for ρb (mean absolute error, MAE of 0.081 g cm-3), while θg was best estimated using IDW12 (MAE = 1.697%) and θv by IDW3 (MAE = 1.814%). It was found that approach 1 underestimated θv. Approach 2 tended to overestimate θv, but reduced the prediction bias by an average of 37% and only improved the prediction accuracy by 1.3% compared to approach 1. Such a great benefit of approach 2 (i.e., the subsequent multiplication of interpolated maps of primary variables) was unexpected considering that a higher sampling density (∼14 data point ha-1 in the present study) tends to minimize the differences between interpolations techniques and approaches. In the context of much lower sampling densities, as generally encountered in environmental studies, one can thus expect approach 2 to yield significantly greater accuracy than approach 1. This approach 2 seems promising and can be further tested for DSM of other secondary variables.

Fine-mapping of the HNF1B multicancer locus identifies candidate variants that mediate endometrial cancer risk.

PubMed

Painter, Jodie N; O'Mara, Tracy A; Batra, Jyotsna; Cheng, Timothy; Lose, Felicity A; Dennis, Joe; Michailidou, Kyriaki; Tyrer, Jonathan P; Ahmed, Shahana; Ferguson, Kaltin; Healey, Catherine S; Kaufmann, Susanne; Hillman, Kristine M; Walpole, Carina; Moya, Leire; Pollock, Pamela; Jones, Angela; Howarth, Kimberley; Martin, Lynn; Gorman, Maggie; Hodgson, Shirley; De Polanco, Ma Magdalena Echeverry; Sans, Monica; Carracedo, Angel; Castellvi-Bel, Sergi; Rojas-Martinez, Augusto; Santos, Erika; Teixeira, Manuel R; Carvajal-Carmona, Luis; Shu, Xiao-Ou; Long, Jirong; Zheng, Wei; Xiang, Yong-Bing; Montgomery, Grant W; Webb, Penelope M; Scott, Rodney J; McEvoy, Mark; Attia, John; Holliday, Elizabeth; Martin, Nicholas G; Nyholt, Dale R; Henders, Anjali K; Fasching, Peter A; Hein, Alexander; Beckmann, Matthias W; Renner, Stefan P; Dörk, Thilo; Hillemanns, Peter; Dürst, Matthias; Runnebaum, Ingo; Lambrechts, Diether; Coenegrachts, Lieve; Schrauwen, Stefanie; Amant, Frederic; Winterhoff, Boris; Dowdy, Sean C; Goode, Ellen L; Teoman, Attila; Salvesen, Helga B; Trovik, Jone; Njolstad, Tormund S; Werner, Henrica M J; Ashton, Katie; Proietto, Tony; Otton, Geoffrey; Tzortzatos, Gerasimos; Mints, Miriam; Tham, Emma; Hall, Per; Czene, Kamila; Liu, Jianjun; Li, Jingmei; Hopper, John L; Southey, Melissa C; Ekici, Arif B; Ruebner, Matthias; Johnson, Nicola; Peto, Julian; Burwinkel, Barbara; Marme, Frederik; Brenner, Hermann; Dieffenbach, Aida K; Meindl, Alfons; Brauch, Hiltrud; Lindblom, Annika; Depreeuw, Jeroen; Moisse, Matthieu; Chang-Claude, Jenny; Rudolph, Anja; Couch, Fergus J; Olson, Janet E; Giles, Graham G; Bruinsma, Fiona; Cunningham, Julie M; Fridley, Brooke L; Børresen-Dale, Anne-Lise; Kristensen, Vessela N; Cox, Angela; Swerdlow, Anthony J; Orr, Nicholas; Bolla, Manjeet K; Wang, Qin; Weber, Rachel Palmieri; Chen, Zhihua; Shah, Mitul; French, Juliet D; Pharoah, Paul D P; Dunning, Alison M; Tomlinson, Ian; Easton, Douglas F; Edwards, Stacey L; Thompson, Deborah J; Spurdle, Amanda B

2015-03-01

Common variants in the hepatocyte nuclear factor 1 homeobox B (HNF1B) gene are associated with the risk of Type II diabetes and multiple cancers. Evidence to date indicates that cancer risk may be mediated via genetic or epigenetic effects on HNF1B gene expression. We previously found single-nucleotide polymorphisms (SNPs) at the HNF1B locus to be associated with endometrial cancer, and now report extensive fine-mapping and in silico and laboratory analyses of this locus. Analysis of 1184 genotyped and imputed SNPs in 6608 Caucasian cases and 37 925 controls, and 895 Asian cases and 1968 controls, revealed the best signal of association for SNP rs11263763 (P = 8.4 × 10(-14), odds ratio = 0.86, 95% confidence interval = 0.82-0.89), located within HNF1B intron 1. Haplotype analysis and conditional analyses provide no evidence of further independent endometrial cancer risk variants at this locus. SNP rs11263763 genotype was associated with HNF1B mRNA expression but not with HNF1B methylation in endometrial tumor samples from The Cancer Genome Atlas. Genetic analyses prioritized rs11263763 and four other SNPs in high-to-moderate linkage disequilibrium as the most likely causal SNPs. Three of these SNPs map to the extended HNF1B promoter based on chromatin marks extending from the minimal promoter region. Reporter assays demonstrated that this extended region reduces activity in combination with the minimal HNF1B promoter, and that the minor alleles of rs11263763 or rs8064454 are associated with decreased HNF1B promoter activity. Our findings provide evidence for a single signal associated with endometrial cancer risk at the HNF1B locus, and that risk is likely mediated via altered HNF1B gene expression. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Fine-mapping of the HNF1B multicancer locus identifies candidate variants that mediate endometrial cancer risk

PubMed Central

Painter, Jodie N.; O'Mara, Tracy A.; Batra, Jyotsna; Cheng, Timothy; Lose, Felicity A.; Dennis, Joe; Michailidou, Kyriaki; Tyrer, Jonathan P.; Ahmed, Shahana; Ferguson, Kaltin; Healey, Catherine S.; Kaufmann, Susanne; Hillman, Kristine M.; Walpole, Carina; Moya, Leire; Pollock, Pamela; Jones, Angela; Howarth, Kimberley; Martin, Lynn; Gorman, Maggie; Hodgson, Shirley; De Polanco, Ma. Magdalena Echeverry; Sans, Monica; Carracedo, Angel; Castellvi-Bel, Sergi; Rojas-Martinez, Augusto; Santos, Erika; Teixeira, Manuel R.; Carvajal-Carmona, Luis; Shu, Xiao-Ou; Long, Jirong; Zheng, Wei; Xiang, Yong-Bing; Montgomery, Grant W.; Webb, Penelope M.; Scott, Rodney J.; McEvoy, Mark; Attia, John; Holliday, Elizabeth; Martin, Nicholas G.; Nyholt, Dale R.; Henders, Anjali K.; Fasching, Peter A.; Hein, Alexander; Beckmann, Matthias W.; Renner, Stefan P.; Dörk, Thilo; Hillemanns, Peter; Dürst, Matthias; Runnebaum, Ingo; Lambrechts, Diether; Coenegrachts, Lieve; Schrauwen, Stefanie; Amant, Frederic; Winterhoff, Boris; Dowdy, Sean C.; Goode, Ellen L.; Teoman, Attila; Salvesen, Helga B.; Trovik, Jone; Njolstad, Tormund S.; Werner, Henrica M.J.; Ashton, Katie; Proietto, Tony; Otton, Geoffrey; Tzortzatos, Gerasimos; Mints, Miriam; Tham, Emma; Hall, Per; Czene, Kamila; Liu, Jianjun; Li, Jingmei; Hopper, John L.; Southey, Melissa C.; Ekici, Arif B.; Ruebner, Matthias; Johnson, Nicola; Peto, Julian; Burwinkel, Barbara; Marme, Frederik; Brenner, Hermann; Dieffenbach, Aida K.; Meindl, Alfons; Brauch, Hiltrud; Lindblom, Annika; Depreeuw, Jeroen; Moisse, Matthieu; Chang-Claude, Jenny; Rudolph, Anja; Couch, Fergus J.; Olson, Janet E.; Giles, Graham G.; Bruinsma, Fiona; Cunningham, Julie M.; Fridley, Brooke L.; Børresen-Dale, Anne-Lise; Kristensen, Vessela N.; Cox, Angela; Swerdlow, Anthony J.; Orr, Nicholas; Bolla, Manjeet K.; Wang, Qin; Weber, Rachel Palmieri; Chen, Zhihua; Shah, Mitul; French, Juliet D.; Pharoah, Paul D.P.; Dunning, Alison M.; Tomlinson, Ian; Easton, Douglas F.; Edwards, Stacey L.; Thompson, Deborah J.; Spurdle, Amanda B.

2015-01-01

Common variants in the hepatocyte nuclear factor 1 homeobox B (HNF1B) gene are associated with the risk of Type II diabetes and multiple cancers. Evidence to date indicates that cancer risk may be mediated via genetic or epigenetic effects on HNF1B gene expression. We previously found single-nucleotide polymorphisms (SNPs) at the HNF1B locus to be associated with endometrial cancer, and now report extensive fine-mapping and in silico and laboratory analyses of this locus. Analysis of 1184 genotyped and imputed SNPs in 6608 Caucasian cases and 37 925 controls, and 895 Asian cases and 1968 controls, revealed the best signal of association for SNP rs11263763 (P = 8.4 × 10−14, odds ratio = 0.86, 95% confidence interval = 0.82–0.89), located within HNF1B intron 1. Haplotype analysis and conditional analyses provide no evidence of further independent endometrial cancer risk variants at this locus. SNP rs11263763 genotype was associated with HNF1B mRNA expression but not with HNF1B methylation in endometrial tumor samples from The Cancer Genome Atlas. Genetic analyses prioritized rs11263763 and four other SNPs in high-to-moderate linkage disequilibrium as the most likely causal SNPs. Three of these SNPs map to the extended HNF1B promoter based on chromatin marks extending from the minimal promoter region. Reporter assays demonstrated that this extended region reduces activity in combination with the minimal HNF1B promoter, and that the minor alleles of rs11263763 or rs8064454 are associated with decreased HNF1B promoter activity. Our findings provide evidence for a single signal associated with endometrial cancer risk at the HNF1B locus, and that risk is likely mediated via altered HNF1B gene expression. PMID:25378557

Development of New Military Applicant Profile (MAP) Autobiographical Questionnaires for Use in Predicting Early Army Attrition

DTIC Science & Technology

1985-01-01

y’. - " Research Note 85-11 in .. Development of New Military Applicant Profile (MAP) Autobiographical Questionnaires for Use in Predicting Early...Manpower and Personnel Research Laboratory Joyce L. Shields, Director Si- V T c ,-wt h>b- ’fl ~P Toved U. S. Army , Research Institute for the...Behavioral and Social Sciences January 1985 v5 1 (-1 ,,o -4. U. S. ARMY RESEARCH INSTITUTE FOR THE BEHAVIORAL AND SOCIAL SCIENCES A Field Operating Agency

Precipitation Field and Intrastorm Flow of Supercell Convective Storms.

DTIC Science & Technology

1981-08-01

1978: Observations of radome transmission losses at 5 cm wavelengths. Preprints 18th Conf. on Radar Meteor., Atlanta, Amer. Meteor. Soc., 288-291. , and...La, and Lr are loss factors (dimensionless) for the radome, the transmission path, and atmospheric gaseous absorp- tion. Typical values are Lc - 2dB...surface fields. Objectively analyzed maps of streamflow , wind com- ponents, temperature, dew point, pressure, divergence, vorticity, mix- ing ratio, and

Computational Design of Biomimetic Gels With Properties of Human Tissues

DTIC Science & Technology

2008-12-01

poly(styrene-block- isoprene -block-styrene) copolymer or SIS in the I-selective solvent has been chosen as a model triblock copolymer for this study...our model. A A B B B RC Fig. 2. Schematic representation of A1B3A1 triblock copolymer mapped on DPD model. Poly(styrene-block- isoprene -block...Pa making G 2.25 times higher for c changes from 0.16 to 0.33 (density of styrene and isoprene blocks are taken to be 1.04 and 0.913 g/cm3

Development and Application of a Low Frequency Near-Field Interferometric-TOA 3D Lightning Mapping Array

NASA Astrophysics Data System (ADS)

Lyu, F.; Cummer, S. A.; Weinert, J. L.; McTague, L. E.; Solanki, R.; Barrett, J.

2014-12-01

Lightning processes radiated extremely wideband electromagnetic signals. Lightning images mapped by VHF interferometry and VHF time of arrival lightning mapping arrays enable us to understand the lightning in-cloud detail development during the extent of flash that can not always be captured by cameras because of the shield of cloud. Lightning processes radiate electromagnetically over an extremely wide bandwidth, offering the possibility of multispectral lightning radio imaging. Low frequency signals are often used for lightning detection, but usually only for ground point location or thunderstorm tracking. Some recent results have demonstrated lightning LF 3D mapping of discrete lightning pulses, but imaging of continuous LF emissions have not been shown. In this work, we report a GPS-synchronized LF near field interferometric-TOA 3D lightning mapping array applied to image the development of lightning flashes on second time scale. Cross-correlation, as used in broadband interferometry, is applied in our system to find windowed arrival time differences with sub-microsecond time resolution. However, because the sources are in the near field of the array, time of arrival processing is used to find the source locations with a typical precision of 100 meters. We show that this system images the complete lightning flash structure with thousands of LF sources for extensive flashes. Importantly, this system is able to map both continuous emissions like dart leaders, and bursty or discrete emissions. Lightning stepped leader and dart leader propagation speeds are estimated to 0.56-2.5x105 m/s and 0.8-2.0x106 m/s respectively, which are consistent with previous reports. In many aspects our LF images are remarkably similar to VHF lightning mapping array images, despite the 1000 times difference in frequency, which may suggest some special links between the LF and VHF emission during lightning processes.

Gradient-based Electrical Properties Tomography (gEPT): a Robust Method for Mapping Electrical Properties of Biological Tissues In Vivo Using Magnetic Resonance Imaging

PubMed Central

Liu, Jiaen; Zhang, Xiaotong; Schmitter, Sebastian; Van de Moortele, Pierre-Francois; He, Bin

2014-01-01

Purpose To develop high-resolution electrical properties tomography (EPT) methods and investigate a gradient-based EPT (gEPT) approach which aims to reconstruct the electrical properties (EP), including conductivity and permittivity, of an imaged sample from experimentally measured B1 maps with improved boundary reconstruction and robustness against measurement noise. Theory and Methods Using a multi-channel transmit/receive stripline head coil, with acquired B1 maps for each coil element, by assuming negligible Bz component compared to transverse B1 components, a theory describing the relationship between B1 field, EP value and their spatial gradient has been proposed. The final EP images were obtained through spatial integration over the reconstructed EP gradient. Numerical simulation, physical phantom and in vivo human experiments at 7 T have been conducted to evaluate the performance of the proposed methods. Results Reconstruction results were compared with target EP values in both simulations and phantom experiments. Human experimental results were compared with EP values in literature. Satisfactory agreement was observed with improved boundary reconstruction. Importantly, the proposed gEPT method proved to be more robust against noise when compared to previously described non-gradient-based EPT approaches. Conclusion The proposed gEPT approach holds promises to improve EP mapping quality by recovering the boundary information and enhancing robustness against noise. PMID:25213371

Compensating for magnetic field inhomogeneity in multigradient-echo-based MR thermometry.

PubMed

Simonis, Frank F J; Petersen, Esben T; Bartels, Lambertus W; Lagendijk, Jan J W; van den Berg, Cornelis A T

2015-03-01

MR thermometry (MRT) is a noninvasive method for measuring temperature that can potentially be used for radio frequency (RF) safety monitoring. This application requires measuring absolute temperature. In this study, a multigradient-echo (mGE) MRT sequence was used for that purpose. A drawback of this sequence, however, is that its accuracy is affected by background gradients. In this article, we present a method to minimize this effect and to improve absolute temperature measurements using MRI. By determining background gradients using a B0 map or by combining data acquired with two opposing readout directions, the error can be removed in a homogenous phantom, thus improving temperature maps. All scans were performed on a 3T system using ethylene glycol-filled phantoms. Background gradients were varied, and one phantom was uniformly heated to validate both compensation approaches. Independent temperature recordings were made with optical probes. Errors correlated closely to the background gradients in all experiments. Temperature distributions showed a much smaller standard deviation when the corrections were applied (0.21°C vs. 0.45°C) and correlated well with thermo-optical probes. The corrections offer the possibility to measure RF heating in phantoms more precisely. This allows mGE MRT to become a valuable tool in RF safety assessment. © 2014 Wiley Periodicals, Inc.

75 FR 21039 - Notice of Temporary Road Closure of Coal Pit Spring-Cave Gulch Road (6287-0-B0), Within the Cave...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-22

... stabilization. The BLM posted signs at main entry points to the temporary closure area. Maps of the closed roads...; HAG10-0046] Notice of Temporary Road Closure of Coal Pit Spring--Cave Gulch Road (6287-0-B0), Within the... closure. SUMMARY: Notice is hereby given that a temporary road closure to public access, use, or occupancy...

ALMA deep field in SSA22: Survey design and source catalog of a 20 arcmin2 survey at 1.1 mm

NASA Astrophysics Data System (ADS)

Umehata, Hideki; Hatsukade, Bunyo; Smail, Ian; Alexander, David M.; Ivison, Rob J.; Matsuda, Yuichi; Tamura, Yoichi; Kohno, Kotaro; Kato, Yuta; Hayatsu, Natsuki H.; Kubo, Mariko; Ikarashi, Soh

2018-06-01

To search for dust-obscured star-formation activity in the early Universe, it is essential to obtain a deep and wide submillimeter/millimeter map. The advent of the Atacama Large Millimeter/submillimeter Array (ALMA) has enabled us to obtain such maps with sufficiently high spatial resolution to be free from source confusion. We present a new 1.1 mm-wave map obtained by ALMA in the SSA22 field. The field contains a remarkable proto-cluster at z = 3.09; therefore, it is an ideal region to investigate the role of a large-scale cosmic web on dust-obscured star formation. The typical 1σ depth of our map is 73 μJy beam-1 with a {0^{^''.}5} resolution. Combining the present survey with earlier, archived observations, we map an area of 20 arcmin2 (71 comoving Mpc2 at z = 3.09). Within the combined survey area we have detected 35 sources at a signal-to-noise ratio (S/N) >5, with flux densities of S1.1mm = 0.43-5.6 mJy, equivalent to star-formation rates of ≳100-1000 M⊙ yr-1 at z = 3.09, for a Chabrier initial mass function: 17 sources out of 35 are new detections. The cumulative number counts show an excess by a factor of three to five compared to blank fields. The excess suggests enhanced, dust-enshrouded star-formation activity in the proto-cluster on a 10 comoving Mpc scale, indicating accelerated galaxy evolution in this overdense region.

Isotropy-violation diagnostics for B-mode polarization foregrounds to the Cosmic Microwave Background

NASA Astrophysics Data System (ADS)

Rotti, Aditya; Huffenberger, Kevin

2016-09-01

Isotropy-violation statistics can highlight polarized galactic foregrounds that contaminate primordial B-modes in the Cosmic Microwave Background (CMB). We propose a particular isotropy-violation test and apply it to polarized Planck 353 GHz data, constructing a map that indicates B-mode foreground dust power over the sky. We build our main isotropy test in harmonic space via the bipolar spherical harmonic basis, and our method helps us to identify the least-contaminated directions. By this measure, there are regions of low foreground in and around the BICEP field, near the South Galactic Pole, and in the Northern Galactic Hemisphere. There is also a possible foreground feature in the BICEP field. We compare our results to those based on the local power spectrum, which is computed on discs using a version of the method of Planck Int. XXX (2016). The discs method is closely related to our isotropy-violation diagnostic. We pay special care to the treatment of noise, including chance correlations with the foregrounds. Currently we use our isotropy tool to assess the cleanest portions of the sky, but in the future such methods will allow isotropy-based null tests for foreground contamination in maps purported to measure primordial B-modes, particularly in cases of limited frequency coverage.

Presence of B. thailandensis and B. thailandensis expressing B. pseudomallei-like capsular polysaccharide in Thailand, and their associations with serological response to B. pseudomallei.

PubMed

Hantrakun, Viriya; Thaipadungpanit, Janjira; Rongkard, Patpong; Srilohasin, Prapaporn; Amornchai, Premjit; Langla, Sayan; Mukaka, Mavuto; Chantratita, Narisara; Wuthiekanun, Vanaporn; Dance, David A B; Day, Nicholas P J; Peacock, Sharon J; Limmathurotsakul, Direk

2018-01-01

Burkholderia pseudomallei is an environmental Gram-negative bacillus and the cause of melioidosis. B. thailandensis, some strains of which express a B. pseudomallei-like capsular polysaccharide (BTCV), is also commonly found in the environment in Southeast Asia but is considered non-pathogenic. The aim of the study was to determine the distribution of B. thailandensis and its capsular variant in Thailand and investigate whether its presence is associated with a serological response to B. pseudomallei. We evaluated the presence of B. pseudomallei and B. thailandensis in 61 rice fields in Northeast (n = 21), East (n = 19) and Central (n = 21) Thailand. We found BTCV in rice fields in East and Central but not Northeast Thailand. Fourteen fields were culture positive for B. pseudomallei alone, 8 for B. thailandensis alone, 11 for both B. pseudomallei and B. thailandensis, 6 for both B. thailandensis and BTCV, and 5 for B. pseudomallei, B. thailandensis and BTCV. Serological testing using the indirect hemagglutination assay (IHA) of 96 farmers who worked in the study fields demonstrated that farmers who worked in B. pseudomallei-positive fields had higher IHA titers than those who worked in B. pseudomallei-negative fields (median 1:40 [range: <1:10-1:640] vs. <1:10 [range: <1:10-1:320], p = 0.002). In a multivariable ordered logistic regression model, IHA titers were significantly associated with the presence of B. pseudomallei (aOR = 3.7; 95% CI 1.8-7.8, p = 0.001) but were not associated with presence of B. thailandensis (p = 0.32) or BTCV (p = 0.32). One sequence type (696) was identified for the 27 BTCV isolates tested. This is the first report of BTCV in Thailand. The presence of B. pseudomallei and B. thailandensis in the same field was not uncommon. Our findings suggest that IHA positivity of healthy rice farmers in Thailand is associated with the presence of B. pseudomallei in rice fields rather than B. thailandensis or BTCV.

Assessing stream bank condition using airborne LiDAR and high spatial resolution image data in temperate semirural areas in Victoria, Australia

NASA Astrophysics Data System (ADS)

Johansen, Kasper; Grove, James; Denham, Robert; Phinn, Stuart

2013-01-01

Stream bank condition is an important physical form indicator for streams related to the environmental condition of riparian corridors. This research developed and applied an approach for mapping bank condition from airborne light detection and ranging (LiDAR) and high-spatial resolution optical image data in a temperate forest/woodland/urban environment. Field observations of bank condition were related to LiDAR and optical image-derived variables, including bank slope, plant projective cover, bank-full width, valley confinement, bank height, bank top crenulation, and ground vegetation cover. Image-based variables, showing correlation with the field measurements of stream bank condition, were used as input to a cumulative logistic regression model to estimate and map bank condition. The highest correlation was achieved between field-assessed bank condition and image-derived average bank slope (R2=0.60, n=41), ground vegetation cover (R=0.43, n=41), bank width/height ratio (R=0.41, n=41), and valley confinement (producer's accuracy=100%, n=9). Cross-validation showed an average misclassification error of 0.95 from an ordinal scale from 0 to 4 using the developed model. This approach was developed to support the remotely sensed mapping of stream bank condition for 26,000 km of streams in Victoria, Australia, from 2010 to 2012.

Updated sesame genome assembly and fine mapping of plant height and seed coat color QTLs using a new high-density genetic map.

PubMed

Wang, Linhai; Xia, Qiuju; Zhang, Yanxin; Zhu, Xiaodong; Zhu, Xiaofeng; Li, Donghua; Ni, Xuemei; Gao, Yuan; Xiang, Haitao; Wei, Xin; Yu, Jingyin; Quan, Zhiwu; Zhang, Xiurong

2016-01-05

Sesame is an important high-quality oil seed crop. The sesame genome was de novo sequenced and assembled in 2014 (version 1.0); however, the number of anchored pseudomolecules was higher than the chromosome number (2n = 2x = 26) due to the lack of a high-density genetic map with 13 linkage groups. We resequenced a permanent population consisting of 430 recombinant inbred lines and constructed a genetic map to improve the sesame genome assembly. We successfully anchored 327 scaffolds onto 13 pseudomolecules. The new genome assembly (version 2.0) included 97.5 % of the scaffolds greater than 150 kb in size present in assembly version 1.0 and increased the total pseudomolecule length from 233.7 to 258.4 Mb with 94.3 % of the genome assembled and 97.2 % of the predicted gene models anchored. Based on the new genome assembly, a bin map including 1,522 bins spanning 1090.99 cM was generated and used to identified 41 quantitative trait loci (QTLs) for sesame plant height and 9 for seed coat color. The plant height-related QTLs explained 3-24 % the phenotypic variation (mean value, 8 %), and 29 of them were detected in at least two field trials. Two major loci (qPH-8.2 and qPH-3.3) that contributed 23 and 18 % of the plant height were located in 350 and 928-kb spaces on Chr8 and Chr3, respectively. qPH-3.3, is predicted to be responsible for the semi-dwarf sesame plant phenotype and contains 102 candidate genes. This is the first report of a sesame semi-dwarf locus and provides an interesting opportunity for a plant architecture study of the sesame. For the sesame seed coat color, the QTLs of the color spaces L*, a*, and b* were detected with contribution rates of 3-46 %. qSCb-4.1 contributed approximately 39 % of the b* value and was located on Chr4 in a 199.9-kb space. A list of 32 candidate genes for the locus, including a predicted black seed coat-related gene, was determined by screening the newly anchored genome. This study offers a high-density genetic map and an improved assembly of the sesame genome. The number of linkage groups and pseudomolecules in this assembly equals the number of sesame chromosomes for the first time. The map and updated genome assembly are expected to serve as a platform for future comparative genomics and genetic studies.

Single-channel, box-shaped, monopole-type antenna for B1+ field manipulation in conjunction with the traveling-wave concept in 9.4 T MRI.

PubMed

Zivkovic, Irena; Scheffler, Klaus

2015-08-01

We have developed a single-channel, box-shaped, monopole-type antenna which, if used in two different configurations, excites complementary B1+ field distributions in the traveling-wave setup. A new monopole-type, single-channel antenna for RF excitation in 9.4 T magnetic resonance imaging is proposed. The antenna is entirely made of copper without lumped elements. Two complementary B1+ field distributions of two different antenna configurations were measured and combined as a root sum of squares. B1+ field inhomogeneity of the combined maps was calculated and compared with published results. By combining B1+ field distributions generated by two antenna configurations, a "no voids" pattern was achieved for the entire upper brain. B1+ inhomogeneity of approximately 20 % was achieved for sagittal and transverse slices; it was <24 % for coronal slices. The results were comparable with those from CP, with "no voids" in slice B1+ inhomogeneity of multichannel loop arrays. The efficiency of the proposed antenna was lower than that of a multichannel array but comparable with that of a patch antenna. The proposed single-channel antenna is a promising candidate for traveling-wave brain imaging. It can be combined with the time-interleaved acquisition of modes (TIAMO) concept if reconfigurability is obtained with a single-antenna element.

TH-CD-BRA-05: First Water Calorimetric Dw Measurement and Direct Measurement of Magnetic Field Correction Factors, KQ,B, in a 1.5 T B-Field of An MRI Linac

DOE Office of Scientific and Technical Information (OSTI.GOV)

Prez, L de; Pooter, J de; Jansen, B

2016-06-15

Purpose: Reference dosimetry in MR-guided radiotherapy is performed in the presence of a B-field. As a consequence the response of ionization chambers changes considerably and depends on parameters not considered in traditional reference dosimetry. Therefore future Codes of Practices need ionization chamber correction factors to correct for both the change in beam quality and the presence of a B-field. The objective was to study the feasibility of water calorimetric absorbed-dose measurements in a 1.5 T B-field of an MRLinac and the direct measurement of kQ,B calibration of ionization chambers. Methods: Calorimetric absorbed dose to water Dw was measured with amore » new water calorimeter in the bore of an MRLinac (TPR20,10 of 0.702). Two waterproof ionization chambers (PTW 30013, IBA FC-65G) were calibrated inside the calorimeter phantom (ND,w,Q,B). Both measurements were normalized to a monitor ionization chamber. Ionization chamber measurements were corrected for conventional influence parameter. Based on the chambers’ Co-60 calibrations (ND,w,Q0), measured directly against the calorimeter. In this study the correction factors kQ,B was determined as the ratio of the calibration coefficients in the MRLinac and in Co-60. Additionally, kB was determined based on kQ values obtained with the IAEA TRS-398 Code of Practice. Results: The kQ,B factors of the ionization chambers mentioned above were respectively 0.9488(8) and 0.9445(8) with resulting kB factors of 0.961(13) and 0.952(13) with standard uncertainties on the least significant digit(s) between brackets. Conclusion: Calorimetric Dw measurements and calibration of waterproof ionization chambers were successfully carried out in the 1.5 T B-field of an MRLinac with a standard uncertainty of 0.7%. Preliminary kQ,B and kB factors were determined with standard uncertainties of respectively 0.8% and 1.3%. The kQ,B agrees with an alternative method within 0.4%. The feasibility of water calorimetry in the presence of B-fields was demonstrated by the direct determination of Dw and kQ,B. This work was supported by EMRP grant HLT06. The EMRP is jointly funded by the EMRP participating countries within EURAMET and the European Union.« less

Genetic and physical mapping at the limb-girdle muscular dystrophy locus (LGMD2B) on chromosome 2p

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bashir, R.; Keers, S.; Strachan, T.

1996-04-01

The limb-girdle muscular dystrophies (LGMD) are a genetically heterogeneous group of disorders, different forms of which have been mapped to at least six distinct genetic loci. We have mapped to at least six distinct genetic loci. We have mapped an autosomal recessive form of LGMD (LGMD2B) to chromosome 2p13. Two other conditions have been shown to map to this region or to the homologous region in mouse: a gene for a form of autosomal recessive distal muscular dystrophy, Miyoshi myopathy, shows linkage to the same markers on chromosome 2p as LGMD2B, and an autosomal recessive mouse mutation mnd2, in whichmore » there is rapidly progressive paralysis and muscle atrophy, has been mapped to mouse chromosome 6 to a region showing conserved synteny with human chromosome 2p12-p13. We have assembled a 6-cM YAC contig spanning the LGMD2B locus and have mapped seven genes and 13 anonymous polymorphic microsatellites to it. Using haplotype analysis in the linked families, we have narrowed our region of interest to a 0-cM interval between D2S2113 and D2S145, which does not overlap with the critical region for mnd2 in mouse. Use of these most closely linked markers will help to determine the relationship between LGMD2B and Miyoshi myopathy. YACs selected from our contig will be the starting point for the cloning of the LGMD2B gene and thereby establish the biological basis for this form of muscular dystrophy and its relationship with the other limb-girdle muscular dystrophies. 26 refs., 6 figs.« less

27 CFR 9.186 - Niagara Escarpment.

Code of Federal Regulations, 2010 CFR

2010-04-01

... significance. (b) Approved Maps. The appropriate maps for determining the boundaries of the “Niagara Escarpment... Ridge Road, and then east on Ridge Road (State Route 104) about 0.15 mile to the road's first... westward along the contour line (through the Escarpment, Ramsey Ridge, and Lewiston Heights subdivisions...

27 CFR 9.186 - Niagara Escarpment.

Code of Federal Regulations, 2011 CFR

2011-04-01

... significance. (b) Approved Maps. The appropriate maps for determining the boundaries of the “Niagara Escarpment... Ridge Road, and then east on Ridge Road (State Route 104) about 0.15 mile to the road's first... westward along the contour line (through the Escarpment, Ramsey Ridge, and Lewiston Heights subdivisions...

Updating the New Zealand Glacier Inventory

NASA Astrophysics Data System (ADS)

Baumann, S. C.; Anderson, B.; Mackintosh, A.; Lorrey, A.; Chinn, T.; Collier, C.; Rack, W.; Purdie, H.

2017-12-01

The last complete glacier inventory of New Zealand dates from the year 1978 (North Island 1988) and was manually constructed from oblique aerial photographs and geodetic maps (Chinn 2001). The inventory has been partly updated by Gjermundsen et al. (2011) for the year 2002 (40% of total area) and by Sirguey & More (2010) for the year 2009 (32% of total area), both using ASTER satellite imagery. We used Landsat 8 OLI/TIRS satellite data from February/March 2016 to map the total glaciated area. Clean and debris-covered ice were mapped semi-automatically. The band ratio approach was used for clean ice (ratio: red/SWIR). We mapped debris-covered ice using a supervised classification (maximum likelihood). Manual post processing was necessary due to misclassifications (e.g. lakes, clouds) or mapping in shadowed areas. It was also necessary to manually combine the clean and debris-covered parts into single glaciers. Additional input data for the post processing were Sentinel 2 images from the same time period, orthophotos from Land Information New Zealand (resolution: 0.75 m, date: Nov 2014), and the 1978/88 outlines from the GLIMS database (http://www.glims.org/). As the Sentinel 2 data were more heavily cloud covered compared to the Landsat 8 images, they were only used for post processing and not for the classification itself. Initial results show that New Zealand glaciers covered an area of about 1050 km² in 2016, a reduction of 16% since 1978. Approximately 17% of glacier area was covered in surface debris. The glaciers in the central Southern Alps around Mt Cook reduced in area by 24%. Glaciers in the North Island of New Zealand reduced by 71% since 1988, and only 2 km² of ice cover remained in 2016. Chinn, TJH (2001). "Distribution of the glacial water resources of New Zealand." Journal of Hydrology (NZ) 40(2): 139-187 Gjermundsen, EF, Mathieu, R, Kääb, A, Chinn, TJH, Fitzharris, B & Hagen, JO (2011). "Assessment of multispectral glacier mapping methods and derivation of glacier area changes, 1978-2002, in the central Southern Alps, New Zealand, from ASTER satellite data, field survey and existing inventory data." Journal of Glaciology 57(204): 667-683 Sirguey, P & More, B (2010). GLIMS Glacier Database. Boulder, NSIDC

Diffusion tensor magnetic resonance imaging of the pancreas.

PubMed

Nissan, Noam; Golan, Talia; Furman-Haran, Edna; Apter, Sara; Inbar, Yael; Ariche, Arie; Bar-Zakay, Barak; Goldes, Yuri; Schvimer, Michael; Grobgeld, Dov; Degani, Hadassa

2014-01-01

To develop a diffusion-tensor-imaging (DTI) protocol that is sensitive to the complex diffusion and perfusion properties of the healthy and malignant pancreas tissues. Twenty-eight healthy volunteers and nine patients with pancreatic-ductal-adenocacinoma (PDAC), were scanned at 3T with T2-weighted and DTI sequences. Healthy volunteers were also scanned with multi-b diffusion-weighted-imaging (DWI), whereas a standard clinical protocol complemented the PDAC patients' scans. Image processing at pixel resolution yielded parametric maps of three directional diffusion coefficients λ1, λ2, λ3, apparent diffusion coefficient (ADC), and fractional anisotropy (FA), as well as a λ1-vector map, and a main diffusion-direction map. DTI measurements of healthy pancreatic tissue at b-values 0,500 s/mm² yielded: λ1 = (2.65±0.35)×10⁻³, λ2 = (1.87±0.22)×10⁻³, λ3 = (1.20±0.18)×10⁻³, ADC = (1.91±0.22)×10⁻³ (all in mm²/s units) and FA = 0.38±0.06. Using b-values of 100,500 s/mm² led to a significant reduction in λ1, λ2, λ3 and ADC (p<.0001) and a significant increase (p<0.0001) in FA. The reduction in the diffusion coefficients suggested a contribution of a fast intra-voxel-incoherent-motion (IVIM) component at b≤100 s/mm², which was confirmed by the multi-b DWI results. In PDACs, λ1, λ2, λ3 and ADC in both 0,500 s/mm² and 100,500 s/mm² b-values sets, as well as the reduction in these diffusion coefficients between the two sets, were significantly lower in comparison to the distal normal pancreatic tissue, suggesting higher cellularity and diminution of the fast-IVIM component in the cancer tissue. DTI using two reference b-values 0 and 100 s/mm² enabled characterization of the water diffusion and anisotropy of the healthy pancreas, taking into account a contribution of IVIM. The reduction in the diffusion coefficients of PDAC, as compared to normal pancreatic tissue, and the smaller change in these coefficients in PDAC when the reference b-value was modified from 0 to 100 s/mm², helped identifying the presence of malignancy.

International Geomagnetic Reference Field: the 12th generation

NASA Astrophysics Data System (ADS)

Thébault, Erwan; Finlay, Christopher C.; Beggan, Ciarán D.; Alken, Patrick; Aubert, Julien; Barrois, Olivier; Bertrand, Francois; Bondar, Tatiana; Boness, Axel; Brocco, Laura; Canet, Elisabeth; Chambodut, Aude; Chulliat, Arnaud; Coïsson, Pierdavide; Civet, François; Du, Aimin; Fournier, Alexandre; Fratter, Isabelle; Gillet, Nicolas; Hamilton, Brian; Hamoudi, Mohamed; Hulot, Gauthier; Jager, Thomas; Korte, Monika; Kuang, Weijia; Lalanne, Xavier; Langlais, Benoit; Léger, Jean-Michel; Lesur, Vincent; Lowes, Frank J.; Macmillan, Susan; Mandea, Mioara; Manoj, Chandrasekharan; Maus, Stefan; Olsen, Nils; Petrov, Valeriy; Ridley, Victoria; Rother, Martin; Sabaka, Terence J.; Saturnino, Diana; Schachtschneider, Reyko; Sirol, Olivier; Tangborn, Andrew; Thomson, Alan; Tøffner-Clausen, Lars; Vigneron, Pierre; Wardinski, Ingo; Zvereva, Tatiana

2015-05-01

The 12th generation of the International Geomagnetic Reference Field (IGRF) was adopted in December 2014 by the Working Group V-MOD appointed by the International Association of Geomagnetism and Aeronomy (IAGA). It updates the previous IGRF generation with a definitive main field model for epoch 2010.0, a main field model for epoch 2015.0, and a linear annual predictive secular variation model for 2015.0-2020.0. Here, we present the equations defining the IGRF model, provide the spherical harmonic coefficients, and provide maps of the magnetic declination, inclination, and total intensity for epoch 2015.0 and their predicted rates of change for 2015.0-2020.0. We also update the magnetic pole positions and discuss briefly the latest changes and possible future trends of the Earth's magnetic field.

KSC-2011-6925

NASA Image and Video Library

2011-09-10

CAPE CANAVERAL, Fla. – Over a group of trees and bushes, the United Launch Alliance Delta II Heavy rocket carrying NASA’s twin Gravity Recovery and Interior Laboratory (GRAIL) mission launches off Space Launch Complex 17B on Cape Canaveral Air Force Station in Florida. The spacecraft launched at 9:08:52 a.m. EDT Sept. 10. GRAIL-A will separate from the second stage of the rocket at about one hour, 21 minutes after liftoff, followed by GRAIL-B at 90 minutes after launch. The spacecraft are embarking on a three-month journey to reach the moon. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future moon vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/George Roberts

KSC-2011-6891

NASA Image and Video Library

2011-09-10

CAPE CANAVERAL, Fla. – At ignition, flames from the engines begin liftoff of the United Launch Alliance Delta II Heavy rocket carrying NASA’s twin Gravity Recovery and Interior Laboratory (GRAIL) mission off Space Launch Complex 17B on Cape Canaveral Air Force Station. The spacecraft launched at 9:08:52 a.m. EDT Sept. 10. GRAIL-A will separate from the second stage of the rocket at about one hour, 21 minutes after liftoff, followed by GRAIL-B at 90 minutes after launch. The spacecraft are embarking on a three-month journey to reach the moon. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future moon vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/Sandra Joseph and Don Kight

KSC-2011-6899

NASA Image and Video Library

2011-09-10

CAPE CANAVERAL, Fla. – Plumes of smoke surround of the United Launch Alliance Delta II Heavy rocket carrying NASA’s twin Gravity Recovery and Interior Laboratory (GRAIL) mission off Space Launch Complex 17B on Cape Canaveral Air Force Station In Florida. The spacecraft launched at 9:08:52 a.m. EDT Sept. 10. GRAIL-A will separate from the second stage of the rocket at about one hour, 21 minutes after liftoff, followed by GRAIL-B at 90 minutes after launch. The spacecraft are embarking on a three-month journey to reach the moon. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future moon vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/Sandra Joseph and Don Kight

KSC-2011-6889

NASA Image and Video Library

2011-09-10

CAPE CANAVERAL, Fla. – Overlooking the Central Florida coast, engine ignition begins liftoff of the United Launch Alliance Delta II Heavy rocket carrying NASA’s twin Gravity Recovery and Interior Laboratory (GRAIL) mission off Space Launch Complex 17B on Cape Canaveral Air Force Station. The spacecraft launched at 9:08:52 a.m. EDT Sept. 10. GRAIL-A will separate from the second stage of the rocket at about one hour, 21 minutes after liftoff, followed by GRAIL-B at 90 minutes after launch. The spacecraft are embarking on a three-month journey to reach the moon. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future moon vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/Sandra Joseph and Don Kight

KSC-2011-6893

NASA Image and Video Library

2011-09-10

CAPE CANAVERAL, Fla. – Flames and smoke from the engines surround the United Launch Alliance Delta II rocket at liftoff carrying NASA’s twin Gravity Recovery and Interior Laboratory (GRAIL) mission off Space Launch Complex 17B on Cape Canaveral Air Force Station in Florida. The spacecraft launched at 9:08:52 a.m. EDT Sept. 10. GRAIL-A will separate from the second stage of the rocket at about one hour, 21 minutes after liftoff, followed by GRAIL-B at 90 minutes after launch. The spacecraft are embarking on a three-month journey to reach the moon. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future moon vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/Sandra Joseph and Don Kight

KSC-2011-6864

NASA Image and Video Library

2011-09-10

CAPE CANAVERAL, Fla. – Fire and smoke light up the sky as a United Launch Alliance Delta II Heavy rocket propels NASA’s Gravity Recovery and Interior Laboratory (GRAIL) mission into space. Liftoff from Space Launch Complex 17B on Cape Canaveral Air Force Station in Florida was at 9:08:52 a.m. EDT Sept.10. GRAIL-A will separate from the second stage of the rocket at about one hour, 21 minutes after liftoff, followed by GRAIL-B at 90 minutes after launch. The spacecraft are embarking on a three-month journey to reach the moon. GRAIL will fly twin spacecraft in tandem around the moon to precisely measure and map variations in the moon's gravitational field. The mission will provide the most accurate global gravity field to date for any planet, including Earth. This detailed information will reveal differences in the density of the moon's crust and mantle and will help answer fundamental questions about the moon's internal structure, thermal evolution, and history of collisions with asteroids. The aim is to map the moon's gravity field so completely that future moon vehicles can safely navigate anywhere on the moon’s surface. For more information, visit http://www.nasa.gov/grail. Photo credit: NASA/Darrell McCall

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rotti, Aditya; Huffenberger, Kevin, E-mail: adityarotti@gmail.com, E-mail: khuffenberger@fsu.edu

Isotropy-violation statistics can highlight polarized galactic foregrounds that contaminate primordial B -modes in the Cosmic Microwave Background (CMB). We propose a particular isotropy-violation test and apply it to polarized Planck 353 GHz data, constructing a map that indicates B -mode foreground dust power over the sky. We build our main isotropy test in harmonic space via the bipolar spherical harmonic basis, and our method helps us to identify the least-contaminated directions. By this measure, there are regions of low foreground in and around the BICEP field, near the South Galactic Pole, and in the Northern Galactic Hemisphere. There is alsomore » a possible foreground feature in the BICEP field. We compare our results to those based on the local power spectrum, which is computed on discs using a version of the method of Planck Int. XXX (2016). The discs method is closely related to our isotropy-violation diagnostic. We pay special care to the treatment of noise, including chance correlations with the foregrounds. Currently we use our isotropy tool to assess the cleanest portions of the sky, but in the future such methods will allow isotropy-based null tests for foreground contamination in maps purported to measure primordial B -modes, particularly in cases of limited frequency coverage.« less

Fusion of pixel and object-based features for weed mapping using unmanned aerial vehicle imagery

NASA Astrophysics Data System (ADS)

Gao, Junfeng; Liao, Wenzhi; Nuyttens, David; Lootens, Peter; Vangeyte, Jürgen; Pižurica, Aleksandra; He, Yong; Pieters, Jan G.

2018-05-01

The developments in the use of unmanned aerial vehicles (UAVs) and advanced imaging sensors provide new opportunities for ultra-high resolution (e.g., less than a 10 cm ground sampling distance (GSD)) crop field monitoring and mapping in precision agriculture applications. In this study, we developed a strategy for inter- and intra-row weed detection in early season maize fields from aerial visual imagery. More specifically, the Hough transform algorithm (HT) was applied to the orthomosaicked images for inter-row weed detection. A semi-automatic Object-Based Image Analysis (OBIA) procedure was developed with Random Forests (RF) combined with feature selection techniques to classify soil, weeds and maize. Furthermore, the two binary weed masks generated from HT and OBIA were fused for accurate binary weed image. The developed RF classifier was evaluated by 5-fold cross validation, and it obtained an overall accuracy of 0.945, and Kappa value of 0.912. Finally, the relationship of detected weeds and their ground truth densities was quantified by a fitted linear model with a coefficient of determination of 0.895 and a root mean square error of 0.026. Besides, the importance of input features was evaluated, and it was found that the ratio of vegetation length and width was the most significant feature for the classification model. Overall, our approach can yield a satisfactory weed map, and we expect that the obtained accurate and timely weed map from UAV imagery will be applicable to realize site-specific weed management (SSWM) in early season crop fields for reducing spraying non-selective herbicides and costs.

A unified large/small-scale dynamo in helical turbulence

NASA Astrophysics Data System (ADS)

Bhat, Pallavi; Subramanian, Kandaswamy; Brandenburg, Axel

2016-09-01

We use high resolution direct numerical simulations (DNS) to show that helical turbulence can generate significant large-scale fields even in the presence of strong small-scale dynamo action. During the kinematic stage, the unified large/small-scale dynamo grows fields with a shape-invariant eigenfunction, with most power peaked at small scales or large k, as in Subramanian & Brandenburg. Nevertheless, the large-scale field can be clearly detected as an excess power at small k in the negatively polarized component of the energy spectrum for a forcing with positively polarized waves. Its strength overline{B}, relative to the total rms field Brms, decreases with increasing magnetic Reynolds number, ReM. However, as the Lorentz force becomes important, the field generated by the unified dynamo orders itself by saturating on successively larger scales. The magnetic integral scale for the positively polarized waves, characterizing the small-scale field, increases significantly from the kinematic stage to saturation. This implies that the small-scale field becomes as coherent as possible for a given forcing scale, which averts the ReM-dependent quenching of overline{B}/B_rms. These results are obtained for 10243 DNS with magnetic Prandtl numbers of PrM = 0.1 and 10. For PrM = 0.1, overline{B}/B_rms grows from about 0.04 to about 0.4 at saturation, aided in the final stages by helicity dissipation. For PrM = 10, overline{B}/B_rms grows from much less than 0.01 to values of the order the 0.2. Our results confirm that there is a unified large/small-scale dynamo in helical turbulence.

HFF-DeepSpace Photometric Catalogs of the 12 Hubble Frontier Fields, Clusters, and Parallels: Photometry, Photometric Redshifts, and Stellar Masses

NASA Astrophysics Data System (ADS)

Shipley, Heath V.; Lange-Vagle, Daniel; Marchesini, Danilo; Brammer, Gabriel B.; Ferrarese, Laura; Stefanon, Mauro; Kado-Fong, Erin; Whitaker, Katherine E.; Oesch, Pascal A.; Feinstein, Adina D.; Labbé, Ivo; Lundgren, Britt; Martis, Nicholas; Muzzin, Adam; Nedkova, Kalina; Skelton, Rosalind; van der Wel, Arjen

2018-03-01

We present Hubble multi-wavelength photometric catalogs, including (up to) 17 filters with the Advanced Camera for Surveys and Wide Field Camera 3 from the ultra-violet to near-infrared for the Hubble Frontier Fields and associated parallels. We have constructed homogeneous photometric catalogs for all six clusters and their parallels. To further expand these data catalogs, we have added ultra-deep K S -band imaging at 2.2 μm from the Very Large Telescope HAWK-I and Keck-I MOSFIRE instruments. We also add post-cryogenic Spitzer imaging at 3.6 and 4.5 μm with the Infrared Array Camera (IRAC), as well as archival IRAC 5.8 and 8.0 μm imaging when available. We introduce the public release of the multi-wavelength (0.2–8 μm) photometric catalogs, and we describe the unique steps applied for the construction of these catalogs. Particular emphasis is given to the source detection band, the contamination of light from the bright cluster galaxies (bCGs), and intra-cluster light (ICL). In addition to the photometric catalogs, we provide catalogs of photometric redshifts and stellar population properties. Furthermore, this includes all the images used in the construction of the catalogs, including the combined models of bCGs and ICL, the residual images, segmentation maps, and more. These catalogs are a robust data set of the Hubble Frontier Fields and will be an important aid in designing future surveys, as well as planning follow-up programs with current and future observatories to answer key questions remaining about first light, reionization, the assembly of galaxies, and many more topics, most notably by identifying high-redshift sources to target.

Dependence of the cyclization of branched tetraethers (CBT) on soil moisture in the Chinese Loess Plateau and the adjacent areas: implications for palaeorainfall reconstructions

NASA Astrophysics Data System (ADS)

Wang, H.; Liu, W.; Zhang, C. L.

2014-06-01

Branched glycerol dialkyl glycerol tetraethers (bGDGTs) have been show promising for continental paleotemperature studies in loess-paleosol sequences (LPSs). Thus far, however, little is known about the effect of soil moisture on their distributions on the Chinese Loess Plateau (CLP). In this study, the relationships between environmental variables and the cyclization of bGDGTs (the so called CBT index) were investigated in a comprehensive set of surface soils in the CLP and its adjacent arid/semi-arid areas. We find that CBT correlates best with soil water content (SWC) or mean annual precipitation (MAP) for the total sample set. Particularly for the CLP soils, there is a significant positive relationship between CBT and MAP (CBT = -0.0021 · MAP + 1.7, n = 37, R2 = 0.87; MAP range: 210-680 mm). This indicates that CBT is mainly controlled by soil moisture in the alkalescent soils (pH > 7) in arid/semi-arid regions, where it is not sensitive to soil pH. Therefore, we suggest that CBT can potentially be used as a palaeorainfall proxy on the CLP. According to the preliminary CBT-MAP relationship for modern CLP soils, palaeorainfall history was reconstructed from three LPSs (Yuanbao, Lantian, and Mangshan) with published bGDGT data spanning the past 70 ka. The CBT-derived MAP records of the three sites consistently show precession-driven variations resembling the speleothem δ18O monsoon record, and are also in general accord with the fluctuations of the respective magnetic susceptibility (MS) record, supporting CBT as a reasonable proxy for palaeorainfall reconstruction in LPS studies. Moreover, the comparison of CBT-derived MAP and bGDGT-derived temperature may enable us to further assess the relative timing and magnitude of hydrological and thermal changes on the CLP, independent of chronology.

ALMA Observations of Dust Polarization and Molecular Line Emission from the Class 0 Protostellar Source Serpens SMM1

NASA Astrophysics Data System (ADS)

Hull, Charles L. H.; Girart, Josep M.; Tychoniec, Łukasz; Rao, Ramprasad; Cortés, Paulo C.; Pokhrel, Riwaj; Zhang, Qizhou; Houde, Martin; Dunham, Michael M.; Kristensen, Lars E.; Lai, Shih-Ping; Li, Zhi-Yun; Plambeck, Richard L.

2017-10-01

We present high angular resolution dust polarization and molecular line observations carried out with the Atacama Large Millimeter/submillimeter Array (ALMA) toward the Class 0 protostar Serpens SMM1. By complementing these observations with new polarization observations from the Submillimeter Array (SMA) and archival data from the Combined Array for Research in Millimeter-wave Astronomy (CARMA) and the James Clerk Maxwell Telescopes (JCMT), we can compare the magnetic field orientations at different spatial scales. We find major changes in the magnetic field orientation between large (˜0.1 pc) scales—where the magnetic field is oriented E-W, perpendicular to the major axis of the dusty filament where SMM1 is embedded—and the intermediate and small scales probed by CARMA (˜1000 au resolution), the SMA (˜350 au resolution), and ALMA (˜140 au resolution). The ALMA maps reveal that the redshifted lobe of the bipolar outflow is shaping the magnetic field in SMM1 on the southeast side of the source; however, on the northwestern side and elsewhere in the source, low-velocity shocks may be causing the observed chaotic magnetic field pattern. High-spatial-resolution continuum and spectral-line observations also reveal a tight (˜130 au) protobinary system in SMM1-b, the eastern component of which is launching an extremely high-velocity, one-sided jet visible in both {CO}(J=2\\to 1) and {SiO}(J=5\\to 4); however, that jet does not appear to be shaping the magnetic field. These observations show that with the sensitivity and resolution of ALMA, we can now begin to understand the role that feedback (e.g., from protostellar outflows) plays in shaping the magnetic field in very young, star-forming sources like SMM1.

Planck intermediate results: XXXII. The relative orientation between the magnetic field and structures traced by interstellar dust

DOE PAGES

Adam, R.; Ade, P. A. R.; Aghanim, N.; ...

2016-02-09

The role of the magnetic field in the formation of the filamentary structures observed in the interstellar medium (ISM) is a debated topic owing to the paucity of relevant observations needed to test existing models. The Planck all-sky maps of linearly polarized emission from dust at 353 GHz provide the required combination of imaging and statistics to study the correlation between the structures of the Galactic magnetic field and of interstellar matter over the whole sky, both in the diffuse ISM and in molecular clouds. The data reveal that structures, or ridges, in the intensity map have counterparts in themore » Stokes Q and/or U maps. In this paper, we focus our study on structures at intermediate and high Galactic latitudes, which cover two orders of magnitude in column density, from 10 20 to 10 22 cm -2. We measure the magnetic field orientation on the plane ofthe sky from the polarization data, and present an algorithm to estimate the orientation of the ridges from the dust intensity map. We use analytical models to account for projection effects. Comparing polarization angles on and off the structures, we estimate the mean ratio between the strengths of the turbulent and mean components of the magnetic field to be between 0.6 and 1.0, with a preferred value of 0.8. We find that the ridges are usually aligned with the magnetic field measured on the structures. This statistical trend becomes more striking for increasing polarization fraction and decreasing column density. There is no alignment for the highest column density ridges. We interpret the increase in alignment with polarization fraction as a consequence of projection effects. We present maps to show that the decrease in alignment for high column density is not due to a loss of correlation between the distribution of matter and the geometry of the magnetic field. In molecular complexes, we also observe structures perpendicular to the magnetic field, which, statistically, cannot be accounted for by projection effects. This first statistical study of the relative orientation between the matter structures and the magnetic field in the ISM points out that, at the angular scales probed by Planck, the field geometry projected on the plane of the sky is correlated with the distribution of matter. In the diffuse ISM, the structures of matter are usually aligned with the magnetic field, while perpendicular structures appear in molecular clouds. Finally, we discuss our results in the context of models and MHD simulations, which attempt to describe the respective roles of turbulence, magnetic field, and self-gravity in the formation of structures in the magnetized ISM.« less

Planck intermediate results. XXXII. The relative orientation between the magnetic field and structures traced by interstellar dust

NASA Astrophysics Data System (ADS)

Planck Collaboration; Adam, R.; Ade, P. A. R.; Aghanim, N.; Alves, M. I. R.; Arnaud, M.; Arzoumanian, D.; Ashdown, M.; Aumont, J.; Baccigalupi, C.; Banday, A. J.; Barreiro, R. B.; Bartolo, N.; Battaner, E.; Benabed, K.; Benoit-Lévy, A.; Bernard, J.-P.; Bersanelli, M.; Bielewicz, P.; Bonaldi, A.; Bonavera, L.; Bond, J. R.; Borrill, J.; Bouchet, F. R.; Boulanger, F.; Bracco, A.; Burigana, C.; Butler, R. C.; Calabrese, E.; Cardoso, J.-F.; Catalano, A.; Chamballu, A.; Chiang, H. C.; Christensen, P. R.; Colombi, S.; Colombo, L. P. L.; Combet, C.; Couchot, F.; Crill, B. P.; Curto, A.; Cuttaia, F.; Danese, L.; Davies, R. D.; Davis, R. J.; de Bernardis, P.; de Rosa, A.; de Zotti, G.; Delabrouille, J.; Dickinson, C.; Diego, J. M.; Dole, H.; Donzelli, S.; Doré, O.; Douspis, M.; Ducout, A.; Dupac, X.; Efstathiou, G.; Elsner, F.; Enßlin, T. A.; Eriksen, H. K.; Falgarone, E.; Ferrière, K.; Finelli, F.; Forni, O.; Frailis, M.; Fraisse, A. A.; Franceschi, E.; Frejsel, A.; Galeotta, S.; Galli, S.; Ganga, K.; Ghosh, T.; Giard, M.; Gjerløw, E.; González-Nuevo, J.; Górski, K. M.; Gregorio, A.; Gruppuso, A.; Guillet, V.; Hansen, F. K.; Hanson, D.; Harrison, D. L.; Henrot-Versillé, S.; Hernández-Monteagudo, C.; Herranz, D.; Hildebrandt, S. R.; Hivon, E.; Hobson, M.; Holmes, W. A.; Hovest, W.; Huffenberger, K. M.; Hurier, G.; Jaffe, A. H.; Jaffe, T. R.; Jones, W. C.; Juvela, M.; Keihänen, E.; Keskitalo, R.; Kisner, T. S.; Kneissl, R.; Knoche, J.; Kunz, M.; Kurki-Suonio, H.; Lagache, G.; Lamarre, J.-M.; Lasenby, A.; Lattanzi, M.; Lawrence, C. R.; Leonardi, R.; Levrier, F.; Liguori, M.; Lilje, P. B.; Linden-Vørnle, M.; López-Caniego, M.; Lubin, P. M.; Macías-Pérez, J. F.; Maffei, B.; Maino, D.; Mandolesi, N.; Maris, M.; Marshall, D. J.; Martin, P. G.; Martínez-González, E.; Masi, S.; Matarrese, S.; Mazzotta, P.; Melchiorri, A.; Mendes, L.; Mennella, A.; Migliaccio, M.; Miville-Deschênes, M.-A.; Moneti, A.; Montier, L.; Morgante, G.; Mortlock, D.; Munshi, D.; Murphy, J. A.; Naselsky, P.; Natoli, P.; Nørgaard-Nielsen, H. U.; Noviello, F.; Novikov, D.; Novikov, I.; Oppermann, N.; Oxborrow, C. A.; Pagano, L.; Pajot, F.; Paoletti, D.; Pasian, F.; Perdereau, O.; Perotto, L.; Perrotta, F.; Pettorino, V.; Piacentini, F.; Piat, M.; Plaszczynski, S.; Pointecouteau, E.; Polenta, G.; Ponthieu, N.; Popa, L.; Pratt, G. W.; Prunet, S.; Puget, J.-L.; Rachen, J. P.; Reach, W. T.; Reinecke, M.; Remazeilles, M.; Renault, C.; Ristorcelli, I.; Rocha, G.; Roudier, G.; Rubiño-Martín, J. A.; Rusholme, B.; Sandri, M.; Santos, D.; Savini, G.; Scott, D.; Soler, J. D.; Spencer, L. D.; Stolyarov, V.; Sudiwala, R.; Sunyaev, R.; Sutton, D.; Suur-Uski, A.-S.; Sygnet, J.-F.; Tauber, J. A.; Terenzi, L.; Toffolatti, L.; Tomasi, M.; Tristram, M.; Tucci, M.; Umana, G.; Valenziano, L.; Valiviita, J.; Van Tent, B.; Vielva, P.; Villa, F.; Wade, L. A.; Wandelt, B. D.; Wehus, I. K.; Wiesemeyer, H.; Yvon, D.; Zacchei, A.; Zonca, A.

2016-02-01

The role of the magnetic field in the formation of the filamentary structures observed in the interstellar medium (ISM) is a debated topic owing to the paucity of relevant observations needed to test existing models. The Planck all-sky maps of linearly polarized emission from dust at 353 GHz provide the required combination of imaging and statistics to study the correlation between the structures of the Galactic magnetic field and of interstellar matter over the whole sky, both in the diffuse ISM and in molecular clouds. The data reveal that structures, or ridges, in the intensity map have counterparts in the Stokes Q and/or U maps. We focus our study on structures at intermediate and high Galactic latitudes, which cover two orders of magnitude in column density, from 1020 to 1022 cm-2. We measure the magnetic field orientation on the plane ofthe sky from the polarization data, and present an algorithm to estimate the orientation of the ridges from the dust intensity map. We use analytical models to account for projection effects. Comparing polarization angles on and off the structures, we estimate the mean ratio between the strengths of the turbulent and mean components of the magnetic field to be between 0.6 and 1.0, with a preferred value of 0.8. We find that the ridges are usually aligned with the magnetic field measured on the structures. This statistical trend becomes more striking for increasing polarization fraction and decreasing column density. There is no alignment for the highest column density ridges. We interpret the increase in alignment with polarization fraction as a consequence of projection effects. We present maps to show that the decrease in alignment for high column density is not due to a loss of correlation between the distribution of matter and the geometry of the magnetic field. In molecular complexes, we also observe structures perpendicular to the magnetic field, which, statistically, cannot be accounted for by projection effects. This first statistical study of the relative orientation between the matter structures and the magnetic field in the ISM points out that, at the angular scales probed by Planck, the field geometry projected on the plane of the sky is correlated with the distribution of matter. In the diffuse ISM, the structures of matter are usually aligned with the magnetic field, while perpendicular structures appear in molecular clouds. We discuss our results in the context of models and MHD simulations, which attempt to describe the respective roles of turbulence, magnetic field, and self-gravity in the formation of structures in the magnetized ISM.

Planck intermediate results: XXXII. The relative orientation between the magnetic field and structures traced by interstellar dust

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adam, R.; Ade, P. A. R.; Aghanim, N.

The role of the magnetic field in the formation of the filamentary structures observed in the interstellar medium (ISM) is a debated topic owing to the paucity of relevant observations needed to test existing models. The Planck all-sky maps of linearly polarized emission from dust at 353 GHz provide the required combination of imaging and statistics to study the correlation between the structures of the Galactic magnetic field and of interstellar matter over the whole sky, both in the diffuse ISM and in molecular clouds. The data reveal that structures, or ridges, in the intensity map have counterparts in themore » Stokes Q and/or U maps. In this paper, we focus our study on structures at intermediate and high Galactic latitudes, which cover two orders of magnitude in column density, from 10 20 to 10 22 cm -2. We measure the magnetic field orientation on the plane ofthe sky from the polarization data, and present an algorithm to estimate the orientation of the ridges from the dust intensity map. We use analytical models to account for projection effects. Comparing polarization angles on and off the structures, we estimate the mean ratio between the strengths of the turbulent and mean components of the magnetic field to be between 0.6 and 1.0, with a preferred value of 0.8. We find that the ridges are usually aligned with the magnetic field measured on the structures. This statistical trend becomes more striking for increasing polarization fraction and decreasing column density. There is no alignment for the highest column density ridges. We interpret the increase in alignment with polarization fraction as a consequence of projection effects. We present maps to show that the decrease in alignment for high column density is not due to a loss of correlation between the distribution of matter and the geometry of the magnetic field. In molecular complexes, we also observe structures perpendicular to the magnetic field, which, statistically, cannot be accounted for by projection effects. This first statistical study of the relative orientation between the matter structures and the magnetic field in the ISM points out that, at the angular scales probed by Planck, the field geometry projected on the plane of the sky is correlated with the distribution of matter. In the diffuse ISM, the structures of matter are usually aligned with the magnetic field, while perpendicular structures appear in molecular clouds. Finally, we discuss our results in the context of models and MHD simulations, which attempt to describe the respective roles of turbulence, magnetic field, and self-gravity in the formation of structures in the magnetized ISM.« less

Mapping the X-shaped Milky Way Bulge

NASA Astrophysics Data System (ADS)

Saito, R. K.; Zoccali, M.; McWilliam, A.; Minniti, D.; Gonzalez, O. A.; Hill, V.

2011-09-01

We analyzed the distribution of the red clump (RC) stars throughout the Galactic bulge using Two Micron All Sky Survey data. We mapped the position of the RC in 1 deg2 fields within the area |l| <= 8fdg5 and 3fdg5 <= |b| <= 8fdg5, for a total of 170 deg2. The single RC seen in the central area splits into two components at high Galactic longitudes in both hemispheres, produced by two structures at different distances along the same line of sight. The X-shape is clearly visible in the Z-X plane for longitudes close to the l = 0° axis. Crude measurements of the space densities of RC stars in the bright and faint RC populations are consistent with the adopted RC distances, providing further supporting evidence that the X-structure is real, and that there is approximate front-back symmetry in our bulge fields. We conclude that the Milky Way bulge has an X-shaped structure within |l| <~ 2°, seen almost edge-on with respect to the line of sight. Additional deep near-infrared photometry extending into the innermost bulge regions combined with spectroscopic data is needed in order to discriminate among the different possibilities that can cause the observed X-shaped structure.

Magnetic-field-induced dose effects in MR-guided radiotherapy systems: dependence on the magnetic field strength.

PubMed

Raaijmakers, A J E; Raaymakers, B W; Lagendijk, J J W

2008-02-21

Several institutes are currently working on the development of a radiotherapy treatment system with online MR imaging (MRI) modality. The main difference between their designs is the magnetic field strength of the MRI system. While we have chosen a 1.5 Tesla (T) magnetic field strength, the Cross Cancer Institute in Edmonton will be using a 0.2 T MRI scanner and the company Viewray aims to use 0.3 T. The magnetic field strength will affect the severity of magnetic field dose effects, such as the electron return effect (ERE): considerable dose increase at tissue air boundaries due to returning electrons. This paper has investigated how the ERE dose increase depends on the magnetic field strength. Therefore, four situations where the ERE occurs have been simulated: ERE at the distal side of the beam, the lateral ERE, ERE in cylindrical air cavities and ERE in the lungs. The magnetic field comparison values were 0.2, 0.75, 1.5 and 3 T. Results show that, in general, magnetic field dose effects are reduced at lower magnetic field strengths. At the distal side, the ERE dose increase is largest for B = 0.75 T and depends on the irradiation field size for B = 0.2 T. The lateral ERE is strongest for B = 3 T but shows no effect for B = 0.2 T. Around cylindrical air cavities, dose inhomogeneities disappear if the radius of the cavity becomes small relative to the in-air radius of the secondary electron trajectories. At larger cavities (r > 1 cm), dose inhomogeneities exist for all magnetic field strengths. In water-lung-water phantoms, the ERE dose increase takes place at the water-lung transition and the dose decreases at the lung-water transition, but these effects are minimal for B = 0.2 T. These results will contribute to evaluating the trade-off between magnetic field dose effects and image quality of MR-guided radiotherapy systems.

Sea Surface Salinity and Wind Retrieval Algorithm Using Combined Passive-Active L-Band Microwave Data

NASA Technical Reports Server (NTRS)

Yueh, Simon H.; Chaubell, Mario J.

2011-01-01

Aquarius is a combined passive/active L-band microwave instrument developed to map the salinity field at the surface of the ocean from space. The data will support studies of the coupling between ocean circulation, the global water cycle, and climate. The primary science objective of this mission is to monitor the seasonal and interannual variation of the large scale features of the surface salinity field in the open ocean with a spatial resolution of 150 kilometers and a retrieval accuracy of 0.2 practical salinity units globally on a monthly basis. The measurement principle is based on the response of the L-band (1.413 gigahertz) sea surface brightness temperatures (T (sub B)) to sea surface salinity. To achieve the required 0.2 practical salinity units accuracy, the impact of sea surface roughness (e.g. wind-generated ripples and waves) along with several factors on the observed brightness temperature has to be corrected to better than a few tenths of a degree Kelvin. To the end, Aquarius includes a scatterometer to help correct for this surface roughness effect.

MIPS AGN and Galaxy Evolution Survey

NASA Astrophysics Data System (ADS)

Jannuzi, Buell; Armus, Lee; Borys, Colin; Brand, Kate; Brodwin, Mark; Brown, Michael; Cool, Richard; Desai, Vandana; Dey, Arjun; Dickinson, Mark; Dole, Herve; Eisenstein, Daniel; Kochanek, Christopher; Le Floc'h, Emeric; Morrison, Jane; Papovich, Casey; Perez-Gonzalez, Pablo; Rieke, George; Rieke, Marcia; Stern, Daniel; Weiner, Ben; Zehavi, Idit

2008-03-01

We propose a far-IR survey of the 9 square degree Bootes field of the NOAO Deep Wide-Field Survey (NDWFS) to 5-sigma flux limits of 0.2, 12.8 and 120 mJy to detect approximately 60000, 3000, and 400 sources at 24, 70 and 160 microns respectively. By combining observations at different roll angles, our maps will have excellent control of detector drifts, enabling precise fluctuation analyses in all three maps. In combination with the matching X-ray, UV, optical, near-IR, and mid-IR photometry, variability data, and the 22,000 spectroscopic redshifts for the field, we have three primary goals. First, we will survey the evolution of LIRGS/ULIRGS to redshifts of 0.6/1.3 at 24 microns and 0.4/0.8 at 70 microns. Over 500 0.6

Rotating-frame gradient fields for magnetic resonance imaging and nuclear magnetic resonance in low fields

DOEpatents

Bouchard, Louis-Serge; Pines, Alexander; Demas, Vasiliki

2014-01-21

A system and method for Fourier encoding a nuclear magnetic resonance (NMR) signal is disclosed. A static magnetic field B.sub.0 is provided along a first direction. An NMR signal from the sample is Fourier encoded by applying a rotating-frame gradient field B.sub.G superimposed on the B.sub.0, where the B.sub.G comprises a vector component rotating in a plane perpendicular to the first direction at an angular frequency .omega.in a laboratory frame. The Fourier-encoded NMR signal is detected.

North–South Asymmetry of the Rotation of the Solar Magnetic Field

NASA Astrophysics Data System (ADS)

Xie, Jinglan; Shi, Xiangjun; Qu, Zhining

2018-03-01

Using the rotation rates of the solar magnetic field during solar cycles 21 to 23 obtained by Chu et al. by analyzing the synoptic magnetic maps produced by the NSO/Kitt Peak and SOHO/MDI during the years 1975 to 2008, the temporal variation of the equatorial rotation rate (A) and the latitude gradient of rotation (B) in the northern and southern hemispheres are studied separately. The results indicate that the rotation is more differential (about 4.3%) in the southern hemisphere in the considered time frame. It is found that the north–south asymmetry of A and the asymmetry of B show increasing trends in the considered time frame, while the north–south asymmetry of the solar activity shows a decreasing trend. There exists a significant negative correlation (at 95% confidence level) between the asymmetry of B and the asymmetry of the solar activity, and this may be due to stronger magnetic activity in a certain hemisphere that may suppress the differential rotation to some extent. The periodicities in the variation of A and B are also studied, and periods of about 5.0 and 10.5 yr (5.5 and 10.4 yr) can be found for the variation of the northern (southern) hemisphere B. Moreover, the north–south asymmetry of A and the asymmetry of B have similar periods of about 2.6–2.7 and 5.2–5.3 yr. Further, cross-correlation analysis indicates that there exists a phase difference (about eight months) between the northern and southern hemisphere B, and this means that the northern hemisphere B generally leads by about eight months.

Simultaneous localization and calibration for electromagnetic tracking systems.

PubMed

Sadjadi, Hossein; Hashtrudi-Zaad, Keyvan; Fichtinger, Gabor

2016-06-01

In clinical environments, field distortion can cause significant electromagnetic tracking errors. Therefore, dynamic calibration of electromagnetic tracking systems is essential to compensate for measurement errors. It is proposed to integrate the motion model of the tracked instrument with redundant EM sensor observations and to apply a simultaneous localization and mapping algorithm in order to accurately estimate the pose of the instrument and create a map of the field distortion in real-time. Experiments were conducted in the presence of ferromagnetic and electrically-conductive field distorting objects and results compared with those of a conventional sensor fusion approach. The proposed method reduced the tracking error from 3.94±1.61 mm to 1.82±0.62 mm in the presence of steel, and from 0.31±0.22 mm to 0.11±0.14 mm in the presence of aluminum. With reduced tracking error and independence from external tracking devices or pre-operative calibrations, the approach is promising for reliable EM navigation in various clinical procedures. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd.

Landau levels with magnetic tunneling in a Weyl semimetal and magnetoconductance of a ballistic p -n junction

NASA Astrophysics Data System (ADS)

Saykin, D. R.; Tikhonov, K. S.; Rodionov, Ya. I.

2018-01-01

We study the Landau levels (LLs) of a Weyl semimetal with two adjacent Weyl nodes. We consider different orientations η =∠ (B ,k0) of magnetic field B with respect to k0, the vector of Weyl node splitting. A magnetic field facilitates the tunneling between the nodes, giving rise to a gap in the transverse energy of the zeroth LL. We show how the spectrum is rearranged at different η and how this manifests itself in the change of behavior of the differential magnetoconductance d G (B )/d B of a ballistic p -n junction. Unlike the single-cone model where Klein tunneling reveals itself in positive d G (B )/d B , in the two-cone case, G (B ) is nonmonotonic with a maximum at Bc∝Φ0k02/ln(k0lE) for large k0lE , where lE=√{ℏ v /|e |E } , with E for the built-in electric field and Φ0 for the magnetic flux quantum.

Maps showing aeromagnetic survey and geologic interpretation of the Chignik and Sutwik Island quadrangles, Alaska

USGS Publications Warehouse

Case, J.E.; Cox, D.P.; Detra, D.E.; Detterman, R.L.; Wilson, Frederic H.

1981-01-01

An aeromagnetic survey over part of the Chignik and Sutwik Island quadrangles, on the southern Alaska Peninsula, was flown in 1977 as part of the Alaska mineral resource assessment program (AMRAP). Maps at scales 1:250,000 and 1:63,360 have been released on open-file (U.s. Geological Survey, 1978a, 1978b). This report includes the aeromagnetic map superimposed on the topographic base (sheet 1) and an interpretation map superimposed on the topographic and simplified geologic base (sheet 2). This discussion provides an interpretation of the aeromagnetic data with respect to regional geology, occurrence of ore deposits and prospects, and potential oil and gas resources. The survey was flown along northwest-southeast lines, spaced about 1.6 km apart, at a nominal elevation of about 300 m above the land surface. A proton-precession magnetometer was used for the survey, and the resulting digital data were computer contoured at intervals of 10 and 50 gammas (sheet 1). The International Geomagnetic Reference Field (IGRF) of 1965, updated to 1977, was removed from the total field data.

Functional Interactions between Major Rice Blast Resistance Genes, Pi-ta and Pi-b, and Minor Blast Resistance QTL.

PubMed

Chen, Xinglong; Jia, Yulin; Jia, Melissa H; Pinson, Shannon; Wang, Xueyan; Wu, Bo Ming

2018-04-16

Major blast resistance (R) genes confer resistance in a gene-for-gene manner. However, little information is available on interactions between R genes. In this study, interactions between two rice blast R genes, Pi-ta and Pi-b, and other minor blast resistance quantitative trait loci (QTL) were investigated in a recombinant inbred line (RIL) population comprising of 243 RILs from a 'Cybonnet' (CYBT)×'Saber' (SB) cross. CYBT has the R gene Pi-ta and SB has Pi-b. Ten differential isolates of four Magnaporthe oryzae races (IB-1, IB-17, IB-49, and IE-1K) were used to evaluate disease reactions of the 243 RILs under greenhouse conditions. Five resistance QTL were mapped on chromosomes 2, 3, 8, 9, and 12 with a linkage map of 179 single nucleotide polymorphism (SNP) markers. Among them, qBR12 (Q1), was mapped at the Pi-ta locus and accounted for 45.41% of phenotypic variation while qBR2 (Q2) was located at the Pi-b locus and accounted for24.81%of disease reactions. An additive-by-additive epistatic interaction between Q1 (Pi-ta) and Q2 (Pi-b) was detected; they can enhance the disease resistance by an additive 0.93 using the 0 to 9 standard phenotyping method. These results suggest that Pi-ta interacts synergistically with Pi-b.

Computer Programs to Display and Modify Data in Geographic Coordinates and Methods to Transfer Positions to and from Maps, with Applications to Gravity Data Processing, Global Positioning Systems, and 30-Meter Digital Elevation Models

USGS Publications Warehouse

Plouff, Donald

1998-01-01

Computer programs were written in the Fortran language to process and display gravity data with locations expressed in geographic coordinates. The programs and associated processes have been tested for gravity data in an area of about 125,000 square kilometers in northwest Nevada, southeast Oregon, and northeast California. This report discusses the geographic aspects of data processing. Utilization of the programs begins with application of a template (printed in PostScript format) to transfer locations obtained with Global Positioning Systems to and from field maps and includes a 5-digit geographic-based map naming convention for field maps. Computer programs, with source codes that can be copied, are used to display data values (printed in PostScript format) and data coverage, insert data into files, extract data from files, shift locations, test for redundancy, and organize data by map quadrangles. It is suggested that 30-meter Digital Elevation Models needed for gravity terrain corrections and other applications should be accessed in a file search by using the USGS 7.5-minute map name as a file name, for example, file '40117_B8.DEM' contains elevation data for the map with a southeast corner at lat 40? 07' 30' N. and lon 117? 52' 30' W.

First results from ideal 2-D MHD reconstruction: magnetopause reconnection event seen by Cluster

NASA Astrophysics Data System (ADS)

Teh, W.-L.; Ã-. Sonnerup, B. U.

2008-09-01

We have applied a new reconstruction method (Sonnerup and Teh, 2008), based on the ideal single-fluid MHD equations in a steady-state, two-dimensional geometry, to a reconnection event observed by the Cluster-3 (C3) spacecraft on 5 July 2001, 06:23 UT, at the dawn-side Northern-Hemisphere magnetopause. The event has been previously studied by use of Grad-Shafranov (GS) reconstruction, performed in the deHoffmann-Teller frame, and using the assumption that the flow effects were either negligible or the flow was aligned with the magnetic field. Our new method allows the reconstruction to be performed in the frame of reference moving with the reconnection site (the X-line). In the event studied, this motion is tailward/equatorward at 140 km/s. The principal result of the study is that the new method functions well, generating a magnetic field map that is qualitatively similar to those obtained in the earlier GS-based reconstructions but now includes the reconnection site itself. In comparison with the earlier map by Hasegawa et al. (2004), our new map has a slightly improved ability (cc=0.979 versus cc=0.975) to predict the fields measured by the other three Cluster spacecraft, at distances from C3 ranging from 2132 km (C1) to 2646 km (C4). The new field map indicates the presence of a magnetic X-point, located some 5300 km tailward/equatorward of C3 at the time of its traversal of the magnetopause. In the immediate vicinity of the X-point, the ideal-MHD assumption breaks down, i.e. resistive and/or other effects should be included. We have circumvented this problem by an ad-hoc procedure in which we allow the axial part of convection electric field to be non-constant near the reconnection site. The new reconstruction method also provides a map of the velocity field, in which the inflow into the wedge of reconnected field lines and the plasma jet within it can be seen, and maps of the electric potential and of the electric current distribution. Even though the velocity map is expected to be inaccurate near the X-point, it provides high-quality predictions (cc=0.969) of the velocity components at points along the path of C1, some of which are close to the X-point; the predictions of density and pressure are less good. Except near the reconnection site, the new reconstruction provides a complete characterization, in unprecedented detail, of the entire dynamic plasma and field equilibrium, reconstructed from the C3 data. It represents our best prediction to date of what the actual configuration was like. But, since substantial time variations were present in the event, the recovered structure by necessity includes considerable time aliasing. The invariant direction used in the reconstruction, is found to agree, within 6°, with a recent theoretical prediction of the X-line orientation by Swisdak and Drake (2007).

Fast macromolecular proton fraction mapping of the human liver in vivo for quantitative assessment of hepatic fibrosis

PubMed Central

Yarnykh, Vasily L.; Tartaglione, Erica V.; Ioannou, George N.

2015-01-01

Macromolecular proton fraction (MPF) is a quantitative MRI parameter determining the magnetization transfer (MT) effect in tissues and defined as a relative amount of immobile macromolecular protons involved into magnetization exchange with mobile water protons. MPF has a potential for quantitative assessment of fibrous tissue due to intrinsically high MPF specific for collagen. The goal of this study was to investigate a relationship between histologically determined fibrosis stage and MPF in the liver parenchyma measured using a recently developed fast single-point clinically-targeted MPF mapping method. Optimal saturation parameters for single-point liver MPF measurements were determined from the analysis of liver Z-spectra in vivo based on the error propagation model. Sixteen patients with chronic hepatitis C viral infection underwent 3T MRI using an optimized liver MPF mapping protocol. Fourteen patients had prior liver biopsy with histologically staged fibrosis (METAVIR scores F0-F3), and two patients had clinically diagnosed cirrhosis (score F4 was assigned). The protocol included four breath-hold three-dimensional scans with 2×3×6 mm3 resolution and 10 transverse sections: 1) dynamic acquisition of MT-weighted and reference images; 2) dynamic acquisition of three images for variable flip angle T1 mapping; 3) dual-echo B0 map; and 4) actual flip-angle imaging B1 map. Average liver MPF was determined as the mode of MPF histograms. MPF was significantly increased in patients with clinically significant fibrosis (scores F2-F4, n=6) compared to patients with no or mild fibrosis (scores F0-F1, n=10): 6.49±0.36% vs. 5.94±0.26%, P<0.01 (Mann-Whitney test). MPF and fibrosis score were strongly positively correlated with the Spearman's rank correlation coefficient 0.80 (P<0.001). This study demonstrates the feasibility of fast MPF mapping of the human liver in vivo and confirms the hypothesis that MPF is increased in hepatic fibrosis and associated with fibrosis stage. MPF may be useful as a non-invasive imaging biomarker of hepatic fibrosis. PMID:26503401

Reliable B Cell Epitope Predictions: Impacts of Method Development and Improved Benchmarking

PubMed Central

Kringelum, Jens Vindahl; Lundegaard, Claus; Lund, Ole; Nielsen, Morten

2012-01-01

The interaction between antibodies and antigens is one of the most important immune system mechanisms for clearing infectious organisms from the host. Antibodies bind to antigens at sites referred to as B-cell epitopes. Identification of the exact location of B-cell epitopes is essential in several biomedical applications such as; rational vaccine design, development of disease diagnostics and immunotherapeutics. However, experimental mapping of epitopes is resource intensive making in silico methods an appealing complementary approach. To date, the reported performance of methods for in silico mapping of B-cell epitopes has been moderate. Several issues regarding the evaluation data sets may however have led to the performance values being underestimated: Rarely, all potential epitopes have been mapped on an antigen, and antibodies are generally raised against the antigen in a given biological context not against the antigen monomer. Improper dealing with these aspects leads to many artificial false positive predictions and hence to incorrect low performance values. To demonstrate the impact of proper benchmark definitions, we here present an updated version of the DiscoTope method incorporating a novel spatial neighborhood definition and half-sphere exposure as surface measure. Compared to other state-of-the-art prediction methods, Discotope-2.0 displayed improved performance both in cross-validation and in independent evaluations. Using DiscoTope-2.0, we assessed the impact on performance when using proper benchmark definitions. For 13 proteins in the training data set where sufficient biological information was available to make a proper benchmark redefinition, the average AUC performance was improved from 0.791 to 0.824. Similarly, the average AUC performance on an independent evaluation data set improved from 0.712 to 0.727. Our results thus demonstrate that given proper benchmark definitions, B-cell epitope prediction methods achieve highly significant predictive performances suggesting these tools to be a powerful asset in rational epitope discovery. The updated version of DiscoTope is available at www.cbs.dtu.dk/services/DiscoTope-2.0. PMID:23300419

Elemental and lattice-parameter mapping of binary oxide superlattices of (LaNiO 3 ) 4 /(LaMnO 3 ) 2 at atomic resolution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kwon, Ji-Hwan; Lu, Ping; Hoffman, Jason

2016-12-19

We construct the elemental distribution and lattice strain maps from the measured atomic column positions in a (LaNiO3)(4)/(LaMnO3)(2) superlattice over a large field of view. The correlation between the distribution of B-cations and the lattice parameter in the form of Vegard's law is validated using atomic resolution energy dispersive x-ray spectroscopy (EDS). The maps show negligible Mn intermixing in the LaNiO3 layer, while Ni intermixing in the LaMnO3 layer improves away from the substrate interface to 9.5 atomic% from the 8th period onwards, indicating that the superlattice interfacial sharpness is established as the distance from the substrate increases. The mapsmore » allow an observation of the compositional defects of the B-sites, which is not possible by Z-contrast alone. Thus, this study demonstrates a promising approach for atomic scale correlative study of lattice strain and composition, and a method for the calibration of atomic resolution EDS maps.« less

Magnetic field topology of τ Scorpii. The uniqueness problem of Stokes V ZDI inversions

NASA Astrophysics Data System (ADS)

Kochukhov, O.; Wade, G. A.

2016-02-01

Context. The early B-type star τ Sco exhibits an unusually complex, relatively weak surface magnetic field. Its topology was previously studied with the Zeeman Doppler imaging (ZDI) modelling of high-resolution circular polarisation (Stokes V) observations. Aims: Here we assess the robustness of the Stokes V ZDI reconstruction of the magnetic field geometry of τ Sco and explore the consequences of using different parameterisations of the surface magnetic maps. Methods: This analysis is based on the archival ESPaDOnS high-resolution Stokes V observations and employs an independent ZDI magnetic inversion code. Results: We succeeded in reproducing previously published magnetic field maps of τ Sco using both general harmonic expansion and a direct, pixel-based representation of the magnetic field. These maps suggest that the field topology of τ Sco is comprised of comparable contributions of the poloidal and toroidal magnetic components. At the same time, we also found that available Stokes V observations can be successfully fitted with restricted harmonic expansions, by either neglecting the toroidal field altogether, or linking the radial and horizontal components of the poloidal field as required by the widely used potential field extrapolation technique. These alternative modelling approaches lead to a stronger and topologically more complex surface field structure. The field distributions, which were recovered with different ZDI options, differ significantly and yield indistinguishable Stokes V profiles but different linear polarisation (Stokes Q and U) signatures. Conclusions: Our investigation underscores the well-known problem of non-uniqueness of the Stokes V ZDI inversions. For the magnetic stars with properties similar to τ Sco (relatively complex field, slow rotation) the outcome of magnetic reconstruction strongly depends on the adopted field parameterisation, rendering photospheric magnetic mapping and determination of the extended magnetospheric field topology ambiguous. Stokes Q and U spectropolarimetric observations represent the only way of breaking the degeneracy of surface magnetic field models. Based on observations obtained at the Canada-France-Hawaii Telescope (CFHT) which is operated by the National Research Council of Canada, the Institut National des Sciences de l'Univers of the Centre National de la Recherche Scientifique of France, and the University of Hawaii.

Mapping the absolute magnetic field and evaluating the quadratic Zeeman-effect-induced systematic error in an atom interferometer gravimeter

NASA Astrophysics Data System (ADS)

Hu, Qing-Qing; Freier, Christian; Leykauf, Bastian; Schkolnik, Vladimir; Yang, Jun; Krutzik, Markus; Peters, Achim

2017-09-01

Precisely evaluating the systematic error induced by the quadratic Zeeman effect is important for developing atom interferometer gravimeters aiming at an accuracy in the μ Gal regime (1 μ Gal =10-8m /s2 ≈10-9g ). This paper reports on the experimental investigation of Raman spectroscopy-based magnetic field measurements and the evaluation of the systematic error in the gravimetric atom interferometer (GAIN) due to quadratic Zeeman effect. We discuss Raman duration and frequency step-size-dependent magnetic field measurement uncertainty, present vector light shift and tensor light shift induced magnetic field measurement offset, and map the absolute magnetic field inside the interferometer chamber of GAIN with an uncertainty of 0.72 nT and a spatial resolution of 12.8 mm. We evaluate the quadratic Zeeman-effect-induced gravity measurement error in GAIN as 2.04 μ Gal . The methods shown in this paper are important for precisely mapping the absolute magnetic field in vacuum and reducing the quadratic Zeeman-effect-induced systematic error in Raman transition-based precision measurements, such as atomic interferometer gravimeters.

Sensitivity of fields generated within magnetically shielded volumes to changes in magnetic permeability

NASA Astrophysics Data System (ADS)

Andalib, T.; Martin, J. W.; Bidinosti, C. P.; Mammei, R. R.; Jamieson, B.; Lang, M.; Kikawa, T.

2017-09-01

Future experiments seeking to measure the neutron electric dipole moment (nEDM) require stable and homogeneous magnetic fields. Normally these experiments use a coil internal to a passively magnetically shielded volume to generate the magnetic field. The stability of the magnetic field generated by the coil within the magnetically shielded volume may be influenced by a number of factors. The factor studied here is the dependence of the internally generated field on the magnetic permeability μ of the shield material. We provide measurements of the temperature-dependence of the permeability of the material used in a set of prototype magnetic shields, using experimental parameters nearer to those of nEDM experiments than previously reported in the literature. Our measurements imply a range of 1/μ dμ/dT from 0-2.7%/K. Assuming typical nEDM experiment coil and shield parameters gives μ/B0 dB0/dμ = 0.01, resulting in a temperature dependence of the magnetic field in a typical nEDM experiment of dB0/dT = 0 - 270 pT/K for B0 = 1 μT. The results are useful for estimating the necessary level of temperature control in nEDM experiments.

Note: Electron energy spectroscopy mapping of surface with scanning tunneling microscope.

PubMed

Li, Meng; Xu, Chunkai; Zhang, Panke; Li, Zhean; Chen, Xiangjun

2016-08-01

We report a novel scanning probe electron energy spectrometer (SPEES) which combines a double toroidal analyzer with a scanning tunneling microscope to achieve both topography imaging and electron energy spectroscopy mapping of surface in situ. The spatial resolution of spectroscopy mapping is determined to be better than 0.7 ± 0.2 μm at a tip sample distance of 7 μm. Meanwhile, the size of the field emission electron beam spot on the surface is also measured, and is about 3.6 ± 0.8 μm in diameter. This unambiguously demonstrates that the spatial resolution of SPEES technique can be much better than the size of the incident electron beam.

First measurements of error fields on W7-X using flux surface mapping

DOE PAGES

Lazerson, Samuel A.; Otte, Matthias; Bozhenkov, Sergey; ...

2016-08-03

Error fields have been detected and quantified using the flux surface mapping diagnostic system on Wendelstein 7-X (W7-X). A low-field 'more » $${\\rlap{-}\\ \\iota} =1/2$$ ' magnetic configuration ($${\\rlap{-}\\ \\iota} =\\iota /2\\pi $$ ), sensitive to error fields, was developed in order to detect their presence using the flux surface mapping diagnostic. In this configuration, a vacuum flux surface with rotational transform of n/m = 1/2 is created at the mid-radius of the vacuum flux surfaces. If no error fields are present a vanishingly small n/m = 5/10 island chain should be present. Modeling indicates that if an n = 1 perturbing field is applied by the trim coils, a large n/m = 1/2 island chain will be opened. This island chain is used to create a perturbation large enough to be imaged by the diagnostic. Phase and amplitude scans of the applied field allow the measurement of a small $$\\sim 0.04$$ m intrinsic island chain with a $${{130}^{\\circ}}$$ phase relative to the first module of the W7-X experiment. Lastly, these error fields are determined to be small and easily correctable by the trim coil system.« less

SU-F-I-24: Feasibility of Magnetic Susceptibility to Relative Electron Density Conversion Method for Radiation Therapy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ito, K; Kadoya, N; Chiba, M

2016-06-15

Purpose: The aim of this study is to develop radiation treatment planning using magnetic susceptibility obtained from quantitative susceptibility mapping (QSM) via MR imaging. This study demonstrates the feasibility of a method for generating a substitute for a CT image from an MRI. Methods: The head of a healthy volunteer was scanned using a CT scanner and a 3.0 T MRI scanner. The CT imaging was performed with a slice thickness of 2.5 mm at 80 and 120 kV (dual-energy scan). These CT images were converted to relative electron density (rED) using the CT-rED conversion table generated by a previousmore » dual-energy CT scan. The CT-rED conversion table was generated using the conversion of the energy-subtracted CT number to rED via a single linear relationship. One T2 star-weighted 3D gradient echo-based sequence with four different echo times images was acquired using the MRI scanner. These T2 star-weighted images were used to estimate the phase data. To estimate the local field map, a Laplacian unwrapping of the phase and background field removal algorithm were implemented to process phase data. To generate a magnetic susceptibility map from the local field map, we used morphology enabled dipole inversion method. The rED map was resampled to the same resolution as magnetic susceptibility, and the magnetic susceptibility-rED conversion table was obtained via voxel-by-voxel mapping between the magnetic susceptibility and rED maps. Results: A correlation between magnetic susceptibility and rED is not observed through our method. Conclusion: Our results show that the correlation between magnetic susceptibility and rED is not observed. As the next step, we assume that the voxel of the magnetic susceptibility map comprises two materials, such as water (0 ppm) and bone (-2.2 ppm) or water and marrow (0.81ppm). The elements of each voxel were estimated from the ratio of the two materials.« less

Joint water-fat separation and deblurring for spiral imaging.

PubMed

Wang, Dinghui; Zwart, Nicholas R; Pipe, James G

2018-06-01

Most previous approaches to spiral Dixon water-fat imaging perform the water-fat separation and deblurring sequentially based on the assumption that the phase accumulation and blurring as a result of off-resonance are separable. This condition can easily be violated in regions where the B 0 inhomogeneity varies rapidly. The goal of this work is to present a novel joint water-fat separation and deblurring method for spiral imaging. The proposed approach is based on a more accurate signal model that takes into account the phase accumulation and blurring simultaneously. A conjugate gradient method is used in the image domain to reconstruct the deblurred water and fat iteratively. Spatially varying convolutions with a local convergence criterion are used to reduce the computational demand. Both simulation and high-resolution brain imaging have demonstrated that the proposed joint method consistently improves the quality of reconstructed water and fat images compared with the sequential approach, especially in regions where the field inhomogeneity changes rapidly in space. The loss of signal-to-noise-ratio as a result of deblurring is minor at optimal echo times. High-quality water-fat spiral imaging can be achieved with the proposed joint approach, provided that an accurate field map of B 0 inhomogeneity is available. Magn Reson Med 79:3218-3228, 2018. © 2017 International Society for Magnetic Resonance in Medicine. © 2017 International Society for Magnetic Resonance in Medicine.

Mapping carbon storage in urban trees with multi-source remote sensing data: relationships between biomass, land use, and demographics in Boston neighborhoods.

PubMed

Raciti, Steve M; Hutyra, Lucy R; Newell, Jared D

2014-12-01

High resolution maps of urban vegetation and biomass are powerful tools for policy-makers and community groups seeking to reduce rates of urban runoff, moderate urban heat island effects, and mitigate the effects of greenhouse gas emissions. We developed a very high resolution map of urban tree biomass, assessed the scale sensitivities in biomass estimation, compared our results with lower resolution estimates, and explored the demographic relationships in biomass distribution across the City of Boston. We integrated remote sensing data (including LiDAR-based tree height estimates) and field-based observations to map canopy cover and aboveground tree carbon storage at ~1m spatial scale. Mean tree canopy cover was estimated to be 25.5±1.5% and carbon storage was 355Gg (28.8MgCha(-1)) for the City of Boston. Tree biomass was highest in forest patches (110.7MgCha(-1)), but residential (32.8MgCha(-1)) and developed open (23.5MgCha(-1)) land uses also contained relatively high carbon stocks. In contrast with previous studies, we did not find significant correlations between tree biomass and the demographic characteristics of Boston neighborhoods, including income, education, race, or population density. The proportion of households that rent was negatively correlated with urban tree biomass (R(2)=0.26, p=0.04) and correlated with Priority Planting Index values (R(2)=0.55, p=0.001), potentially reflecting differences in land management among rented and owner-occupied residential properties. We compared our very high resolution biomass map to lower resolution biomass products from other sources and found that those products consistently underestimated biomass within urban areas. This underestimation became more severe as spatial resolution decreased. This research demonstrates that 1) urban areas contain considerable tree carbon stocks; 2) canopy cover and biomass may not be related to the demographic characteristics of Boston neighborhoods; and 3) that recent advances in high resolution remote sensing have the potential to improve the characterization and management of urban vegetation. Copyright © 2014 Elsevier B.V. All rights reserved.

Quantitation Error in 1H MRS Caused by B1 Inhomogeneity and Chemical Shift Displacement.

PubMed

Watanabe, Hidehiro; Takaya, Nobuhiro

2017-11-08

The quantitation accuracy in proton magnetic resonance spectroscopy ( 1 H MRS) improves at higher B 0 field. However, a larger chemical shift displacement (CSD) and stronger B 1 inhomogeneity exist. In this work, we evaluate the quantitation accuracy for the spectra of metabolite mixtures in phantom experiments at 4.7T. We demonstrate a position-dependent error in quantitation and propose a correction method by measuring water signals. All experiments were conducted on a whole-body 4.7T magnetic resonance (MR) system with a quadrature volume coil for transmission and reception. We arranged three bottles filled with metabolite solutions of N-acetyl aspartate (NAA) and creatine (Cr) in a vertical row inside a cylindrical phantom filled with water. Peak areas of three singlets of NAA and Cr were measured on three 1 H spectra at three volume of interests (VOIs) inside three bottles. We also measured a series of water spectra with a shifted carrier frequency and measured a reception sensitivity map. The ratios of NAA and Cr at 3.92 ppm to Cr at 3.01 ppm differed amongst the three VOIs in peak area, which leads to a position-dependent error. The nature of slope depicting the relationship between peak areas and the shifted values of frequency was like that between the reception sensitivities and displacement at every VOI. CSD and inhomogeneity of reception sensitivity cause amplitude modulation along the direction of chemical shift on the spectra, resulting in a quantitation error. This error may be more significant at higher B 0 field where CSD and B 1 inhomogeneity are more severe. This error may also occur in reception using a surface coil having inhomogeneous B 1 . Since this type of error is around a few percent, the data should be analyzed with greater attention while discussing small differences in the studies of 1 H MRS.

2D modeling of DC potential structures induced by RF sheaths with transverse currents in front of ICRF antenna

NASA Astrophysics Data System (ADS)

Faudot, E.; Heuraux, S.; Colas, L.

2005-09-01

Understanding DC potential generation in front of ICRF antennas is crucial for long pulse high RF power systems. DC potentials are produced by sheath rectification of these RF potentials. To reach this goal, near RF parallel electric fields have to be computed in 3D and integrated along open magnetic field lines to yield a 2D RF potential map in a transverse plane. DC potentials are produced by sheath rectification of these RF potentials. As RF potentials are spatially inhomogeneous, transverse polarization currents are created, modifying RF and DC maps. Such modifications are quantified on a `test map' having initially a Gaussian shape and assuming that the map remains Gaussian near its summit,the time behavior of the peak can be estimated analytically in presence of polarization current as a function of its width r0 and amplitude φ0 (normalized to a characteristic length for transverse transport and to the local temperature). A `peaking factor' is built from the DC peak potential normalized to φ0, and validated with a 2D fluid code and a 2D PIC code (XOOPIC). In an unexpected way transverse currents can increase this factor. Realistic situations of a Tore Supra antenna are also studied, with self-consistent near fields provided by ICANT code. Basic processes will be detailed and an evaluation of the `peaking factor' for ITER will be presented for a given configuration.

2D modeling of DC potential structures induced by RF sheaths with transverse currents in front of ICRF antenna

DOE Office of Scientific and Technical Information (OSTI.GOV)

Faudot, E.; Heuraux, S.; Colas, L.

2005-09-26

Understanding DC potential generation in front of ICRF antennas is crucial for long pulse high RF power systems. DC potentials are produced by sheath rectification of these RF potentials. To reach this goal, near RF parallel electric fields have to be computed in 3D and integrated along open magnetic field lines to yield a 2D RF potential map in a transverse plane. DC potentials are produced by sheath rectification of these RF potentials. As RF potentials are spatially inhomogeneous, transverse polarization currents are created, modifying RF and DC maps. Such modifications are quantified on a 'test map' having initially amore » Gaussian shape and assuming that the map remains Gaussian near its summit,the time behavior of the peak can be estimated analytically in presence of polarization current as a function of its width r0 and amplitude {phi}0 (normalized to a characteristic length for transverse transport and to the local temperature). A 'peaking factor' is built from the DC peak potential normalized to {phi}0, and validated with a 2D fluid code and a 2D PIC code (XOOPIC). In an unexpected way transverse currents can increase this factor. Realistic situations of a Tore Supra antenna are also studied, with self-consistent near fields provided by ICANT code. Basic processes will be detailed and an evaluation of the 'peaking factor' for ITER will be presented for a given configuration.« less

2D seismic interpretation and characterization of the Hauterivian-Early Barremian source rock in Al Baraka oil field, Komombo Basin, Upper Egypt

NASA Astrophysics Data System (ADS)

Ali, Moamen; Darwish, M.; Essa, Mahmoud A.; Abdelhady, A.

2018-03-01

Komombo Basin is located in Upper Egypt about 570 km southeast of Cairo; it is an asymmetrical half graben and the first oil producing basin in Upper Egypt. The Six Hills Formation is of Early Cretaceous age and subdivided into seven members from base to top (A-G); meanwhile the B member is of Hauterivian-Early Barremian and it is the only source rock of Komombo Basin. Therefore, a detailed study of the SR should be carried out, which includes the determination of the main structural elements, thickness, facies distribution and characterization of the B member SR which has not been conducted previously in the study area. Twenty 2D seismic lines were interpreted with three vertical seismic profiles (VSP) to construct the depth structure-tectonic map on the top of the B member and to highlight the major structural elements. The interpretation of depth structure contour map shows two main fault trends directed towards the NW-SE and NE to ENE directions. The NW-SE trend is the dominant one, creating a major half-graben system. Also the depth values range from -8400 ft at the depocenter in the eastern part to -4800 ft at the shoulder of the basin in the northwestern part of the study area. Meanwhile the Isopach contour map of the B member shows a variable thickness ranging between 300 ft to 750 ft. The facies model shows that the B member SR is composed mainly of shale with some sandstone streaks. The B member rock samples were collected from Al Baraka-1 and Al Baraka SE-1 in the eastern part of Komombo Basin. The results indicate that the organic matter content (TOC) has mainly good to very good (1-3.36 wt %), The B member samples have HI values in the range 157-365 (mg HC/g TOC) and dominated by Type II/III kerogen, and is thus considered to be oil-gas prone based on Rock-Eval pyrolysis, Tmax values between 442° and 456° C therefore interpreted to be mature for hydrocarbon generation. Based on the measured vitrinite equivalent reflectance values, the B member SR samples have a range 0.7-1.14%Ro, in the oil generation window.

Quantitative prediction of radio frequency induced local heating derived from measured magnetic field maps in magnetic resonance imaging: A phantom validation at 7 T

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Xiaotong; Liu, Jiaen; Van de Moortele, Pierre-Francois

2014-12-15

Electrical Properties Tomography (EPT) technique utilizes measurable radio frequency (RF) coil induced magnetic fields (B1 fields) in a Magnetic Resonance Imaging (MRI) system to quantitatively reconstruct the local electrical properties (EP) of biological tissues. Information derived from the same data set, e.g., complex numbers of B1 distribution towards electric field calculation, can be used to estimate, on a subject-specific basis, local Specific Absorption Rate (SAR). SAR plays a significant role in RF pulse design for high-field MRI applications, where maximum local tissue heating remains one of the most constraining limits. The purpose of the present work is to investigate themore » feasibility of such B1-based local SAR estimation, expanding on previously proposed EPT approaches. To this end, B1 calibration was obtained in a gelatin phantom at 7 T with a multi-channel transmit coil, under a particular multi-channel B1-shim setting (B1-shim I). Using this unique set of B1 calibration, local SAR distribution was subsequently predicted for B1-shim I, as well as for another B1-shim setting (B1-shim II), considering a specific set of parameter for a heating MRI protocol consisting of RF pulses plaid at 1% duty cycle. Local SAR results, which could not be directly measured with MRI, were subsequently converted into temperature change which in turn were validated against temperature changes measured by MRI Thermometry based on the proton chemical shift.« less

Spectral properties and ASTER-based alteration mapping of Masahim volcano facies, SE Iran

NASA Astrophysics Data System (ADS)

Tayebi, Mohammad H.; Tangestani, Majid H.; Vincent, Robert K.; Neal, Devin

2014-10-01

This study applies Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) data and the Mixture Tuned Matched Filtering (MTMF) algorithm to map the sub-pixel distribution of alteration minerals associated with the Masahim volcano, SE Iran for understanding the spatial relationship between alteration minerals and volcano facies. Investigations of the alteration mineralogy were conducted using field-spectroscopy, X-ray diffraction (XRD) analysis and ASTER Short Wave Infrared (SWIR) spectral data. In order to spectrally characterize the stratovolcano deposits, lithological units and alteration minerals, the volcano was divided into three facies: the Central, Proximal, and Medial-distal facies. The reflectance spectra of rock samples show absorption features of a number of minerals including white mica, kaolinite, montmorillonite, illite, goethite, hematite, jarosite, opal, and chlorite. The end-members of key alteration minerals including sericite (phyllic zone), kaolinite (argillic zone) and chlorite (propylitic zone) were extracted from imagery using the Pixel Purity Index (PPI) method and were used to map alteration minerals. Accuracy assessment through field observations was used to verify the fraction maps. The results showed that most prominent altered rocks situated at the central facies of volcano. The alteration minerals were discriminated with the coefficient of determination (R2) of 0.74, 0.81, and 0.68 for kaolinite, sericite, and chlorite, respectively. The results of this study have the potential to refine the map of alteration zones in the Masahim volcano.

Scaling behavior near the itinerant ferromagnetic quantum critical point (FQCP) of NiCoCrx for 0.8

NASA Astrophysics Data System (ADS)

Sales, Brian; Jin, Ke; Bei, Hongbin; Nichols, John; Chisholm, Matthew; May, Andrew; McGuire, Michael

Low temperature magnetization, resistivity and heat capacity data are reported for the concentrated solid solution NiCoCrx as a function of temperature and magnetic field. In the quantum critical region the low field (0.001-0.01 T) magnetic susceptibility, Chi, diverges as T- 1 / 2 and the magnetization data exhibits T/B scaling from 0.001 2 Tesla, the crossover temperature from the QC to Fermi liquid regime is no longer linear in B, and is better described by B0.75. This scaling behavior is particularly accurate in describing the normalized magnetoresistance data [Rho(B,T)-Rho(0,T)]/T, which is equivalent to the ratio of relaxation rates associated with magnetic field and temperature TauT/TauB. The location of the QCP is sensitive to the composition x and the strain generated during synthesis. These medium-entropy alloys are interesting model systems to explore the role of chemical disorder at FQCP. Research supported by the DOE Office of Science, Materials Science and Engineering Division, and the Energy Dissipation to Defect Evolution EFRC.