Sample records for background phase variations

  1. Earth Tide Analysis Specifics in Case of Unstable Aquifer Regime

    NASA Astrophysics Data System (ADS)

    Vinogradov, Evgeny; Gorbunova, Ella; Besedina, Alina; Kabychenko, Nikolay

    2017-06-01

    We consider the main factors that affect underground water flow including aquifer supply, collector state, and distant earthquakes seismic waves' passage. In geodynamically stable conditions underground inflow change can significantly distort hydrogeological response to Earth tides, which leads to the incorrect estimation of phase shift between tidal harmonics of ground displacement and water level variations in a wellbore. Besides an original approach to phase shift estimation that allows us to get one value per day for the semidiurnal M2 wave, we offer the empirical method of excluding periods of time that are strongly affected by high inflow. In spite of rather strong ground motion during earthquake waves' passage, we did not observe corresponding phase shift change against the background on significant recurrent variations due to fluctuating inflow influence. Though inflow variations do not look like the only important parameter that must be taken into consideration while performing phase shift analysis, permeability estimation is not adequate without correction based on background alternations of aquifer parameters due to natural and anthropogenic reasons.

  2. Earth Tide Analysis Specifics in Case of Unstable Aquifer Regime

    NASA Astrophysics Data System (ADS)

    Vinogradov, Evgeny; Gorbunova, Ella; Besedina, Alina; Kabychenko, Nikolay

    2018-05-01

    We consider the main factors that affect underground water flow including aquifer supply, collector state, and distant earthquakes seismic waves' passage. In geodynamically stable conditions underground inflow change can significantly distort hydrogeological response to Earth tides, which leads to the incorrect estimation of phase shift between tidal harmonics of ground displacement and water level variations in a wellbore. Besides an original approach to phase shift estimation that allows us to get one value per day for the semidiurnal M2 wave, we offer the empirical method of excluding periods of time that are strongly affected by high inflow. In spite of rather strong ground motion during earthquake waves' passage, we did not observe corresponding phase shift change against the background on significant recurrent variations due to fluctuating inflow influence. Though inflow variations do not look like the only important parameter that must be taken into consideration while performing phase shift analysis, permeability estimation is not adequate without correction based on background alternations of aquifer parameters due to natural and anthropogenic reasons.

  3. Fluid surface compensation in digital holographic microscopy for topography measurement

    NASA Astrophysics Data System (ADS)

    Lin, Li-Chien; Tu, Han-Yen; Lai, Xin-Ji; Wang, Sheng-Shiun; Cheng, Chau-Jern

    2012-06-01

    A novel technique is presented for surface compensation and topography measurement of a specimen in fluid medium by digital holographic microscopy (DHM). In the measurement, the specimen is preserved in a culture dish full of liquid culture medium and an environmental vibration induces a series of ripples to create a non-uniform background on the reconstructed phase image. A background surface compensation algorithm is proposed to account for this problem. First, we distinguish the cell image from the non-uniform background and a morphological image operation is used to reduce the noise effect on the background surface areas. Then, an adaptive sampling from the background surface is employed, taking dense samples from the high-variation area while leaving the smooth region mostly untouched. A surface fitting algorithm based on the optimal bi-cubic functional approximation is used to establish a whole background surface for the phase image. Once the background surface is found, the background compensated phase can be obtained by subtracting the estimated background from the original phase image. From the experimental results, the proposed algorithm performs effectively in removing the non-uniform background of the phase image and has the ability to obtain the specimen topography inside fluid medium under environmental vibrations.

  4. Search for Teff variations along the Solar Cycle

    NASA Astrophysics Data System (ADS)

    Caccin, B.; Penza, V.

    The measurements of the total solar irradiance (TSI) show the existence of variations on characteristic times going from few minutes to whole solar cycle, as a result of different physical mechanisms acting on different temporal scales. Along the cycle delta (TSI) is the order of 0.15%, in phase with the magnetic activity (cf. Fröhlich, \\cite{frohlich}), attributed mainly to the overcompensation of the facular brightness vs the spot darkness and to a network variation. The problem of determining also a possible contribution due to a global variation of the photospheric background remains open. \\ Here we study the variations of the line-depth ratios measured by Gray and Livingston (\\cite{grayliv97a}, \\cite{grayliv97b}) to determine delta Teff along the cycle and show that they cannot be attributed to a modulation of the photospheric background alone, but that active region effects are, probably, dominant.

  5. Relativistic electron plasma oscillations in an inhomogeneous ion background

    NASA Astrophysics Data System (ADS)

    Karmakar, Mithun; Maity, Chandan; Chakrabarti, Nikhil

    2018-06-01

    The combined effect of relativistic electron mass variation and background ion inhomogeneity on the phase mixing process of large amplitude electron oscillations in cold plasmas have been analyzed by using Lagrangian coordinates. An inhomogeneity in the ion density is assumed to be time-independent but spatially periodic, and a periodic perturbation in the electron density is considered as well. An approximate space-time dependent solution is obtained in the weakly-relativistic limit by employing the Bogolyubov and Krylov method of averaging. It is shown that the phase mixing process of relativistically corrected electron oscillations is strongly influenced by the presence of a pre-existing ion density ripple in the plasma background.

  6. Phase processing for quantitative susceptibility mapping of regions with large susceptibility and lack of signal.

    PubMed

    Fortier, Véronique; Levesque, Ives R

    2018-06-01

    Phase processing impacts the accuracy of quantitative susceptibility mapping (QSM). Techniques for phase unwrapping and background removal have been proposed and demonstrated mostly in brain. In this work, phase processing was evaluated in the context of large susceptibility variations (Δχ) and negligible signal, in particular for susceptibility estimation using the iterative phase replacement (IPR) algorithm. Continuous Laplacian, region-growing, and quality-guided unwrapping were evaluated. For background removal, Laplacian boundary value (LBV), projection onto dipole fields (PDF), sophisticated harmonic artifact reduction for phase data (SHARP), variable-kernel sophisticated harmonic artifact reduction for phase data (V-SHARP), regularization enabled sophisticated harmonic artifact reduction for phase data (RESHARP), and 3D quadratic polynomial field removal were studied. Each algorithm was quantitatively evaluated in simulation and qualitatively in vivo. Additionally, IPR-QSM maps were produced to evaluate the impact of phase processing on the susceptibility in the context of large Δχ with negligible signal. Quality-guided unwrapping was the most accurate technique, whereas continuous Laplacian performed poorly in this context. All background removal algorithms tested resulted in important phase inaccuracies, suggesting that techniques used for brain do not translate well to situations where large Δχ and no or low signal are expected. LBV produced the smallest errors, followed closely by PDF. Results suggest that quality-guided unwrapping should be preferred, with PDF or LBV for background removal, for QSM in regions with large Δχ and negligible signal. This reduces the susceptibility inaccuracy introduced by phase processing. Accurate background removal remains an open question. Magn Reson Med 79:3103-3113, 2017. © 2017 International Society for Magnetic Resonance in Medicine. © 2017 International Society for Magnetic Resonance in Medicine.

  7. Background field removal using a region adaptive kernel for quantitative susceptibility mapping of human brain

    NASA Astrophysics Data System (ADS)

    Fang, Jinsheng; Bao, Lijun; Li, Xu; van Zijl, Peter C. M.; Chen, Zhong

    2017-08-01

    Background field removal is an important MR phase preprocessing step for quantitative susceptibility mapping (QSM). It separates the local field induced by tissue magnetic susceptibility sources from the background field generated by sources outside a region of interest, e.g. brain, such as air-tissue interface. In the vicinity of air-tissue boundary, e.g. skull and paranasal sinuses, where large susceptibility variations exist, present background field removal methods are usually insufficient and these regions often need to be excluded by brain mask erosion at the expense of losing information of local field and thus susceptibility measures in these regions. In this paper, we propose an extension to the variable-kernel sophisticated harmonic artifact reduction for phase data (V-SHARP) background field removal method using a region adaptive kernel (R-SHARP), in which a scalable spherical Gaussian kernel (SGK) is employed with its kernel radius and weights adjustable according to an energy "functional" reflecting the magnitude of field variation. Such an energy functional is defined in terms of a contour and two fitting functions incorporating regularization terms, from which a curve evolution model in level set formation is derived for energy minimization. We utilize it to detect regions of with a large field gradient caused by strong susceptibility variation. In such regions, the SGK will have a small radius and high weight at the sphere center in a manner adaptive to the voxel energy of the field perturbation. Using the proposed method, the background field generated from external sources can be effectively removed to get a more accurate estimation of the local field and thus of the QSM dipole inversion to map local tissue susceptibility sources. Numerical simulation, phantom and in vivo human brain data demonstrate improved performance of R-SHARP compared to V-SHARP and RESHARP (regularization enabled SHARP) methods, even when the whole paranasal sinus regions are preserved in the brain mask. Shadow artifacts due to strong susceptibility variations in the derived QSM maps could also be largely eliminated using the R-SHARP method, leading to more accurate QSM reconstruction.

  8. Background field removal using a region adaptive kernel for quantitative susceptibility mapping of human brain.

    PubMed

    Fang, Jinsheng; Bao, Lijun; Li, Xu; van Zijl, Peter C M; Chen, Zhong

    2017-08-01

    Background field removal is an important MR phase preprocessing step for quantitative susceptibility mapping (QSM). It separates the local field induced by tissue magnetic susceptibility sources from the background field generated by sources outside a region of interest, e.g. brain, such as air-tissue interface. In the vicinity of air-tissue boundary, e.g. skull and paranasal sinuses, where large susceptibility variations exist, present background field removal methods are usually insufficient and these regions often need to be excluded by brain mask erosion at the expense of losing information of local field and thus susceptibility measures in these regions. In this paper, we propose an extension to the variable-kernel sophisticated harmonic artifact reduction for phase data (V-SHARP) background field removal method using a region adaptive kernel (R-SHARP), in which a scalable spherical Gaussian kernel (SGK) is employed with its kernel radius and weights adjustable according to an energy "functional" reflecting the magnitude of field variation. Such an energy functional is defined in terms of a contour and two fitting functions incorporating regularization terms, from which a curve evolution model in level set formation is derived for energy minimization. We utilize it to detect regions of with a large field gradient caused by strong susceptibility variation. In such regions, the SGK will have a small radius and high weight at the sphere center in a manner adaptive to the voxel energy of the field perturbation. Using the proposed method, the background field generated from external sources can be effectively removed to get a more accurate estimation of the local field and thus of the QSM dipole inversion to map local tissue susceptibility sources. Numerical simulation, phantom and in vivo human brain data demonstrate improved performance of R-SHARP compared to V-SHARP and RESHARP (regularization enabled SHARP) methods, even when the whole paranasal sinus regions are preserved in the brain mask. Shadow artifacts due to strong susceptibility variations in the derived QSM maps could also be largely eliminated using the R-SHARP method, leading to more accurate QSM reconstruction. Copyright © 2017. Published by Elsevier Inc.

  9. Reform-based science teaching: A mixed-methods approach to explaining variation in secondary science teacher practice

    NASA Astrophysics Data System (ADS)

    Jetty, Lauren E.

    The purpose of this two-phase, sequential explanatory mixed-methods study was to understand and explain the variation seen in secondary science teachers' enactment of reform-based instructional practices. Utilizing teacher socialization theory, this mixed-methods analysis was conducted to determine the relative influence of secondary science teachers' characteristics, backgrounds and experiences across their teacher development to explain the range of teaching practices exhibited by graduates from three reform-oriented teacher preparation programs. Data for this study were obtained from the Investigating the Meaningfulness of Preservice Programs Across the Continuum of Teaching (IMPPACT) Project, a multi-university, longitudinal study funded by NSF. In the first quantitative phase of the study, data for the sample (N=120) were collected from three surveys from the IMPPACT Project database. Hierarchical multiple regression analysis was used to examine the separate as well as the combined influence of factors such as teachers' personal and professional background characteristics, beliefs about reform-based science teaching, feelings of preparedness to teach science, school context, school culture and climate of professional learning, and influences of the policy environment on the teachers' use of reform-based instructional practices. Findings indicate three blocks of variables, professional background, beliefs/efficacy, and local school context added significant contribution to explaining nearly 38% of the variation in secondary science teachers' use of reform-based instructional practices. The five variables that significantly contributed to explaining variation in teachers' use of reform-based instructional practices in the full model were, university of teacher preparation, sense of preparation for teaching science, the quality of professional development, science content focused professional, and the perceived level of professional autonomy. Using the results from phase one, the second qualitative phase selected six case study teachers based on their levels of reform-based teaching practices to highlight teachers across the range of practices from low, average, to high levels of implementation. Using multiple interview sources, phase two helped to further explain the variation in levels of reform-based practices. Themes related to teachers' backgrounds, local contexts, and state policy environments were developed as they related to teachers' socialization experiences across these contexts. The results of the qualitative analysis identified the following factors differentiating teachers who enacted reform-based instructional practices from those who did not: 1) extensive science research experiences prior to their preservice teacher preparation; 2) the structure and quality of their field placements; 3) developing and valuing a research-based understanding of teaching and learning as a result of their preservice teacher preparation experiences; 4) the professional culture of their school context where there was support for a high degree of professional autonomy and receiving support from "educational companions" with a specific focus on teacher pedagogy to support student learning; and 5) a greater sense of agency to navigate their districts' interpretation and implementation of state polices. Implications for key stakeholders as well as directions for future research are discussed.

  10. Streptococcus pneumoniae TIGR4 Phase-Locked Opacity Variants Differ in Virulence Phenotypes.

    PubMed

    Oliver, Melissa B; Basu Roy, Ankita; Kumar, Ranjit; Lefkowitz, Elliot J; Swords, W Edward

    2017-01-01

    Streptococcus pneumoniae (pneumococcus) is a leading human pathogen that can cause serious localized and invasive diseases. Pneumococci can undergo a spontaneous and reversible phase variation that is reflected in colony opacity and which allows the population to adapt to different host environments. Generally, transparent variants are adapted for nasopharyngeal colonization, whereas opaque variants are associated with invasive disease. In recent work, colony phase variation was shown to occur by means of recombination events to generate multiple alleles of the hsdS targeting domain of a DNA methylase complex, which mediates epigenetic changes in gene expression. A panel of isogenic strains were created in the well-studied S. pneumoniae TIGR4 background that are "locked" in the transparent ( n = 4) or opaque ( n = 2) colony phenotype. The strains had significant differences in colony size which were stable over multiple passages in vitro and in vivo . While there were no significant differences in adherence for the phase-locked mutant strains to immortalized epithelial cells, biofilm formation and viability were reduced for the opaque variants in static assays. Nasopharyngeal colonization was stable for all strains, but the mortality rates differed between them. Transcript profiling by transcriptome sequencing (RNA-seq) analyses revealed that the expression levels of certain virulence factors were increased in a phase-specific manner. As epigenetic regulation of phase variation (often referred to as "phasevarion") is emerging as a common theme for mucosal pathogens, these results serve as a model for future studies of host-pathogen interactions. IMPORTANCE A growing number of bacterial species undergo epigenetic phase variation due to variable expression or specificity of DNA-modifying enzymes. For pneumococci, this phase variation has long been appreciated as being revealed by changes in colony opacity, which are reflected in changes in expression or accessibility of factors on the bacterial surface. Recent work showed that recombination-generated variation in alleles of the HsdS DNA methylase specificity subunit mediated pneumococcal phase variation. We generated phase-locked populations of S. pneumoniae TIGR4 expressing a single nonvariant hsdS allele and observed significant differences in gene expression and virulence. These results highlight the importance of focused pathogenesis studies within specific phase types. Moreover, the generation of single-allele hsdS constructs will greatly facilitate such studies.

  11. Streptococcus pneumoniae TIGR4 Phase-Locked Opacity Variants Differ in Virulence Phenotypes

    PubMed Central

    Oliver, Melissa B.; Basu Roy, Ankita; Kumar, Ranjit; Lefkowitz, Elliot J.

    2017-01-01

    ABSTRACT Streptococcus pneumoniae (pneumococcus) is a leading human pathogen that can cause serious localized and invasive diseases. Pneumococci can undergo a spontaneous and reversible phase variation that is reflected in colony opacity and which allows the population to adapt to different host environments. Generally, transparent variants are adapted for nasopharyngeal colonization, whereas opaque variants are associated with invasive disease. In recent work, colony phase variation was shown to occur by means of recombination events to generate multiple alleles of the hsdS targeting domain of a DNA methylase complex, which mediates epigenetic changes in gene expression. A panel of isogenic strains were created in the well-studied S. pneumoniae TIGR4 background that are “locked” in the transparent (n = 4) or opaque (n = 2) colony phenotype. The strains had significant differences in colony size which were stable over multiple passages in vitro and in vivo. While there were no significant differences in adherence for the phase-locked mutant strains to immortalized epithelial cells, biofilm formation and viability were reduced for the opaque variants in static assays. Nasopharyngeal colonization was stable for all strains, but the mortality rates differed between them. Transcript profiling by transcriptome sequencing (RNA-seq) analyses revealed that the expression levels of certain virulence factors were increased in a phase-specific manner. As epigenetic regulation of phase variation (often referred to as "phasevarion") is emerging as a common theme for mucosal pathogens, these results serve as a model for future studies of host-pathogen interactions. IMPORTANCE A growing number of bacterial species undergo epigenetic phase variation due to variable expression or specificity of DNA-modifying enzymes. For pneumococci, this phase variation has long been appreciated as being revealed by changes in colony opacity, which are reflected in changes in expression or accessibility of factors on the bacterial surface. Recent work showed that recombination-generated variation in alleles of the HsdS DNA methylase specificity subunit mediated pneumococcal phase variation. We generated phase-locked populations of S. pneumoniae TIGR4 expressing a single nonvariant hsdS allele and observed significant differences in gene expression and virulence. These results highlight the importance of focused pathogenesis studies within specific phase types. Moreover, the generation of single-allele hsdS constructs will greatly facilitate such studies. PMID:29152579

  12. Probing pre-inflationary anisotropy with directional variations in the gravitational wave background

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Furuya, Yu; Niiyama, Yuki; Sendouda, Yuuiti, E-mail: furuya@tap.st.hirosaki-u.ac.jp, E-mail: niiyama@tap.st.hirosaki-u.ac.jp, E-mail: sendouda@hirosaki-u.ac.jp

    We perform a detailed analysis on a primordial gravitational-wave background amplified during a Kasner-like pre-inflationary phase allowing for general triaxial anisotropies. It is found that the predicted angular distribution map of gravitational-wave intensity on large scales exhibits topologically distinctive patterns according to the degree of the pre-inflationary anisotropy, thereby serving as a potential probe for the pre-inflationary early universe with future all-sky observations of gravitational waves. We also derive an observational limit on the amplitude of such anisotropic gravitational waves from the B -mode polarisation of the cosmic microwave background.

  13. Meta-Analysis of Human Factors Engineering Studies Comparing Individual Differences, Practice Effects and Equipment Design Variations.

    DTIC Science & Technology

    1985-02-21

    Approvoid foT public 90Ieleol, 2* . tJni7nited " - . - o . - ’--. * . -... . 1 UNCLASSIFIED S, E CURITY CLASSIFICATION OF THIS PAGE-" REPORT DOCUMENTATION...ACCESSION NO. 11. TITLE (Include Security Classification) . Veta -Analysis of Human Factors Engineering Studies Comparing Individual Differences, Practice...Background C Opportunity D Significance E History III. PHASE I FINAL REPORT A Literature Review B Formal Analysis C Results D Implications for Phase II IV

  14. A new level set model for cell image segmentation

    NASA Astrophysics Data System (ADS)

    Ma, Jing-Feng; Hou, Kai; Bao, Shang-Lian; Chen, Chun

    2011-02-01

    In this paper we first determine three phases of cell images: background, cytoplasm and nucleolus according to the general physical characteristics of cell images, and then develop a variational model, based on these characteristics, to segment nucleolus and cytoplasm from their relatively complicated backgrounds. In the meantime, the preprocessing obtained information of cell images using the OTSU algorithm is used to initialize the level set function in the model, which can speed up the segmentation and present satisfactory results in cell image processing.

  15. Born iterative reconstruction using perturbed-phase field estimates.

    PubMed

    Astheimer, Jeffrey P; Waag, Robert C

    2008-10-01

    A method of image reconstruction from scattering measurements for use in ultrasonic imaging is presented. The method employs distorted-wave Born iteration but does not require using a forward-problem solver or solving large systems of equations. These calculations are avoided by limiting intermediate estimates of medium variations to smooth functions in which the propagated fields can be approximated by phase perturbations derived from variations in a geometric path along rays. The reconstruction itself is formed by a modification of the filtered-backpropagation formula that includes correction terms to account for propagation through an estimated background. Numerical studies that validate the method for parameter ranges of interest in medical applications are presented. The efficiency of this method offers the possibility of real-time imaging from scattering measurements.

  16. A High Resolution Capacitive Sensing System for the Measurement of Water Content in Crude Oil

    PubMed Central

    Aslam, Muhammad Zubair; Tang, Tong Boon

    2014-01-01

    This paper presents the design of a non-intrusive system to measure ultra-low water content in crude oil. The system is based on a capacitance to phase angle conversion method. Water content is measured with a capacitance sensor comprising two semi-cylindrical electrodes mounted on the outer side of a glass tube. The presence of water induces a capacitance change that in turn converts into a phase angle, with respect to a main oscillator. A differential sensing technique is adopted not only to ensure high immunity against temperature variation and background noise, but also to eliminate phase jitter and amplitude variation of the main oscillator that could destabilize the output. The complete capacitive sensing system was implemented in hardware and experiment results using crude oil samples demonstrated that a resolution of ±50 ppm of water content in crude oil was achieved by the proposed design. PMID:24967606

  17. A high resolution capacitive sensing system for the measurement of water content in crude oil.

    PubMed

    Zubair, Muhammad; Tang, Tong Boon

    2014-06-25

    This paper presents the design of a non-intrusive system to measure ultra-low water content in crude oil. The system is based on a capacitance to phase angle conversion method. Water content is measured with a capacitance sensor comprising two semi-cylindrical electrodes mounted on the outer side of a glass tube. The presence of water induces a capacitance change that in turn converts into a phase angle, with respect to a main oscillator. A differential sensing technique is adopted not only to ensure high immunity against temperature variation and background noise, but also to eliminate phase jitter and amplitude variation of the main oscillator that could destabilize the output. The complete capacitive sensing system was implemented in hardware and experiment results using crude oil samples demonstrated that a resolution of ± 50 ppm of water content in crude oil was achieved by the proposed design.

  18. A stationary phase solution for mountain waves with application to mesospheric mountain waves generated by Auckland Island

    NASA Astrophysics Data System (ADS)

    Broutman, Dave; Eckermann, Stephen D.; Knight, Harold; Ma, Jun

    2017-01-01

    A relatively general stationary phase solution is derived for mountain waves from localized topography. It applies to hydrostatic, nonhydrostatic, or anelastic dispersion relations, to arbitrary localized topography, and to arbitrary smooth vertically varying background temperature and vector wind profiles. A simple method is introduced to compute the ray Jacobian that quantifies the effects of horizontal geometrical spreading in the stationary phase solution. The stationary phase solution is applied to mesospheric mountain waves generated by Auckland Island during the Deep Propagating Gravity Wave Experiment. The results are compared to a Fourier solution. The emphasis is on interpretations involving horizontal geometrical spreading. The results show larger horizontal geometrical spreading for nonhydrostatic waves than for hydrostatic waves in the region directly above the island; the dominant effect of horizontal geometrical spreading in the lower ˜30 km of the atmosphere, compared to the effects of refraction and background density variation; and the enhanced geometrical spreading due to directional wind in the approach to a critical layer in the mesosphere.

  19. Monitoring in-vitro bovine embryo development during the first days after fertilization (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Kandel, Mikhail E.; Rubessa, Marcello; Fernandes, Daniel; Nguyen, Tan H.; Wheeler, Matthew B.; Popescu, Gabriel

    2016-03-01

    Conventional label-based contrast enhancement techniques (e.g., fluorescence) frequently modify the genetic makeup of tagged cells, making them poor candidates for use in in-vitro fertilization applications. Instead, we choose a label-free form of contrast, based on interferometric imaging, sensitive to optical path length differences. Compared to, single HeLa cells, typical mammalian ova and embryos are more than an order of magnitude thicker. As a result, regions of large phase variation lead to phase wrapping and an overall reduction in signal intensity occurs due to multiple scattering. These effects manifest themselves in low-spatial frequencies (blurs), with the desired details buried in the background. We present a phase shifting interferometer that yields the derivative of the phase, a quantity whose value is particularly sensitive to local variations and fine details. We demonstrate that our new real-time imaging platform is valuable in measuring the multiday development of bovine embryos. Reconstructing the derivative of the image phase and amplitude, we characterize the motion of previously low-contrast structures, which are relevant for embryo viability tests.

  20. Born iterative reconstruction using perturbed-phase field estimates

    PubMed Central

    Astheimer, Jeffrey P.; Waag, Robert C.

    2008-01-01

    A method of image reconstruction from scattering measurements for use in ultrasonic imaging is presented. The method employs distorted-wave Born iteration but does not require using a forward-problem solver or solving large systems of equations. These calculations are avoided by limiting intermediate estimates of medium variations to smooth functions in which the propagated fields can be approximated by phase perturbations derived from variations in a geometric path along rays. The reconstruction itself is formed by a modification of the filtered-backpropagation formula that includes correction terms to account for propagation through an estimated background. Numerical studies that validate the method for parameter ranges of interest in medical applications are presented. The efficiency of this method offers the possibility of real-time imaging from scattering measurements. PMID:19062873

  1. Symmetric Phase Only Filtering for Improved DPIV Data Processing

    NASA Technical Reports Server (NTRS)

    Wernet, Mark P.

    2006-01-01

    The standard approach in Digital Particle Image Velocimetry (DPIV) data processing is to use Fast Fourier Transforms to obtain the cross-correlation of two single exposure subregions, where the location of the cross-correlation peak is representative of the most probable particle displacement across the subregion. This standard DPIV processing technique is analogous to Matched Spatial Filtering, a technique commonly used in optical correlators to perform the crosscorrelation operation. Phase only filtering is a well known variation of Matched Spatial Filtering, which when used to process DPIV image data yields correlation peaks which are narrower and up to an order of magnitude larger than those obtained using traditional DPIV processing. In addition to possessing desirable correlation plane features, phase only filters also provide superior performance in the presence of DC noise in the correlation subregion. When DPIV image subregions contaminated with surface flare light or high background noise levels are processed using phase only filters, the correlation peak pertaining only to the particle displacement is readily detected above any signal stemming from the DC objects. Tedious image masking or background image subtraction are not required. Both theoretical and experimental analyses of the signal-to-noise ratio performance of the filter functions are presented. In addition, a new Symmetric Phase Only Filtering (SPOF) technique, which is a variation on the traditional phase only filtering technique, is described and demonstrated. The SPOF technique exceeds the performance of the traditionally accepted phase only filtering techniques and is easily implemented in standard DPIV FFT based correlation processing with no significant computational performance penalty. An "Automatic" SPOF algorithm is presented which determines when the SPOF is able to provide better signal to noise results than traditional PIV processing. The SPOF based optical correlation processing approach is presented as a new paradigm for more robust cross-correlation processing of low signal-to-noise ratio DPIV image data."

  2. Modulation of MJO-Associated North Pacific Storm Track Variation by the QBO

    NASA Astrophysics Data System (ADS)

    Wang, J.; Kim, H. M.; Chang, E. K. M.; Son, S. W.

    2017-12-01

    The North Pacific storm track (NPST) is a preferred region of extratropical synoptic-scale disturbances which plays a critical role in the mid-latitude weather and climate variability during the cool season (October to March). Extreme precipitation, heat/cold events, and sub-seasonal variation of the North Atlantic Oscillation (NAO) are found to be caused/modulated by the NPST. Thus investigating the variability of the NPST and the possible precursors for its variation is an important field of research. The Madden-Julian Oscillation (MJO) is the dominant intraseasonal mode in the tropics. A teleconnection between the MJO and the NPST has been realized recently. However, the MJO-NPST relationship shows a significant dependence on the background state. As previous studies primarily kept an eye on the modulation of El Niño Southern Oscillation (ENSO) on the MJO-NPST relationship, this study focuses on the role of the Quasi-Biennial Oscillation (QBO) because the QBO is suggested to make a much larger contribution to the interannual variability of the MJO than ENSO does. Results of this study show a regulation of the MJO-NPST relationship by different phases of the QBO. The amplitude of the MJO associated NPST variation is generally larger in the easterly phase of the QBO (EQBO) than in westerly phase of the QBO (WQBO). The pattern of the NPST variation also exhibits significant differences between the two QBO phases. The analysis of the underlying mechanism from the perspective of intraseasonal mean flow indicates an important role of the MJO associated baroclinicity in the enhanced amplitude of the NPST variation in EQBO years. On the other hand, the pattern differences in the NPST variation during different QBO phases result from changes in the intraseasonal baroclinic energy conversion and corresponding energy propagation. The results of this study suggest a consideration of the QBO impact in reproducing the MJO-midlatitudes teleconnection in general circulation models (GCMs). This study also provides a potential route for the improvement of the sub-seasonal prediction of extratropical storm activities.

  3. Background Noises Versus Intraseasonal Variation Signals: Small vs. Large Convective Cloud Objects From CERES Aqua Observations

    NASA Technical Reports Server (NTRS)

    Xu, Kuan-Man

    2015-01-01

    During inactive phases of Madden-Julian Oscillation (MJO), there are plenty of deep but small convective systems and far fewer deep and large ones. During active phases of MJO, a manifestation of an increase in the occurrence of large and deep cloud clusters results from an amplification of large-scale motions by stronger convective heating. This study is designed to quantitatively examine the roles of small and large cloud clusters during the MJO life cycle. We analyze the cloud object data from Aqua CERES (Clouds and the Earth's Radiant Energy System) observations between July 2006 and June 2010 for tropical deep convective (DC) and cirrostratus (CS) cloud object types according to the real-time multivariate MJO index, which assigns the tropics to one of the eight MJO phases each day. The cloud object is a contiguous region of the earth with a single dominant cloud-system type. The criteria for defining these cloud types are overcast footprints and cloud top pressures less than 400 hPa, but DC has higher cloud optical depths (=10) than those of CS (<10). The size distributions, defined as the footprint numbers as a function of cloud object diameters, for particular MJO phases depart greatly from the combined (8-phase) distribution at large cloud-object diameters due to the reduced/increased numbers of cloud objects related to changes in the large-scale environments. The medium diameter corresponding to the combined distribution is determined and used to partition all cloud objects into "small" and "large" groups of a particular phase. The two groups corresponding to the combined distribution have nearly equal numbers of footprints. The medium diameters are 502 km for DC and 310 km for cirrostratus. The range of the variation between two extreme phases (typically, the most active and depressed phases) for the small group is 6-11% in terms of the numbers of cloud objects and the total footprint numbers. The corresponding range for the large group is 19-44%. In terms of the probability density functions of radiative and cloud physical properties, there are virtually no differences between the MJO phases for the small group, but there are significant differences for the large groups for both DC and CS types. These results suggest that the intreseasonal variation signals reside at the large cloud clusters while the small cloud clusters represent the background noises resulting from various types of the tropical waves with different wavenumbers and propagation speeds/directions.

  4. Phase variation and microevolution at homopolymeric tracts in Bordetella pertussis

    PubMed Central

    Gogol, Emily B; Cummings, Craig A; Burns, Ryan C; Relman, David A

    2007-01-01

    Background Bordetella pertussis, the causative agent of whooping cough, is a highly clonal pathogen of the respiratory tract. Its lack of genetic diversity, relative to many bacterial pathogens, could limit its ability to adapt to a hostile and changing host environment. This limitation might be overcome by phase variation, as observed for other mucosal pathogens. One of the most common mechanisms of phase variation is reversible expansion or contraction of homopolymeric tracts (HPTs). Results The genomes of B. pertussis and the two closely related species, B. bronchiseptica and B. parapertussis, were screened for homopolymeric tracts longer than expected on the basis of chance, given their nucleotide compositions. Sixty-nine such HPTs were found in total among the three genomes, 74% of which were polymorphic among the three species. Nine HPTs were genotyped in a collection of 90 geographically and temporally diverse B. pertussis strains using the polymerase chain reaction/ligase detection reaction (PCR/LDR) assay. Six HPTs were polymorphic in this collection of B. pertussis strains. Of note, one of these polymorphic HPTs was found in the fimX promoter, where a single base insertion variant was present in seven strains, all of which were isolated prior to introduction of the pertussis vaccine. Transcript abundance of fimX was found to be 3.8-fold lower in strains carrying the longer allele. HPTs in three other genes, tcfA, bapC, and BP3651, varied widely in composition across the strain collection and displayed allelic polymorphism within single cultures. Conclusion Allelic polymorphism at homopolymeric tracts is common within the B. pertussis genome. Phase variability may be an important mechanism in B. pertussis for evasion of the immune system and adaptation to different niches in the human host. High sensitivity and specificity make the PCR/LDR assay a powerful tool for investigating allelic variation at HPTs. Using this method, allelic diversity and phase variation were demonstrated at several B. pertussis loci. PMID:17509142

  5. Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling

    PubMed Central

    2013-01-01

    Background In this study, a multi-parent population of barley cultivars was grown in the field for two consecutive years and then straw saccharification (sugar release by enzymes) was subsequently analysed in the laboratory to identify the cultivars with the highest consistent sugar yield. This experiment was used to assess the benefit of accounting for both the multi-phase and multi-environment aspects of large-scale phenotyping experiments with field-grown germplasm through sound statistical design and analysis. Results Complementary designs at both the field and laboratory phases of the experiment ensured that non-genetic sources of variation could be separated from the genetic variation of cultivars, which was the main target of the study. The field phase included biological replication and plot randomisation. The laboratory phase employed re-randomisation and technical replication of samples within a batch, with a subset of cultivars chosen as duplicates that were randomly allocated across batches. The resulting data was analysed using a linear mixed model that incorporated field and laboratory variation and a cultivar by trial interaction, and ensured that the cultivar means were more accurately represented than if the non-genetic variation was ignored. The heritability detected was more than doubled in each year of the trial by accounting for the non-genetic variation in the analysis, clearly showing the benefit of this design and approach. Conclusions The importance of accounting for both field and laboratory variation, as well as the cultivar by trial interaction, by fitting a single statistical model (multi-environment trial, MET, model), was evidenced by the changes in list of the top 40 cultivars showing the highest sugar yields. Failure to account for this interaction resulted in only eight cultivars that were consistently in the top 40 in different years. The correspondence between the rankings of cultivars was much higher at 25 in the MET model. This approach is suited to any multi-phase and multi-environment population-based genetic experiment. PMID:24359577

  6. T1 and susceptibility contrast at high fields

    NASA Astrophysics Data System (ADS)

    Neelavalli, Jaladhar

    Clinical imaging at high magnetic field strengths (≥ 3Tesla) is sought after primarily due to the increased signal strength available at these fields. This increased SNR can be used to perform: (a) high resolution imaging in the same time as at lower field strengths; (b) the same resolution imaging with much faster acquisition; and (c) functional MR imaging (fMRI), dynamic perfusion and diffusion imaging with increased sensitivity. However they are also associated with increased power deposition (SAR) due to increase in imaging frequency and longer T1 relaxation times. Longer T1s mean longer imaging times for generating good T1 contrast images. On the other hand for faster imaging, at high fields fast spin echo or magnetization prepared sequences are conventionally proposed which are, however, associated with high SAR values. Imaging with low SAR is more and more important as we move towards high fields and particularly for patients with metallic implants like pacemakers or deep brain stimulator. The SAR limit acceptable for these patients is much less than the limit acceptable for normal subjects. A new method is proposed for imaging at high fields with good contrast with simultaneous reduction in power deposition. Further, T1 based contrast optimization problem in FLASH imaging is considered for tissues with different T1s but same spin densities. The solution providing optimal imaging parameters is simplified for quick and easy computation in a clinical setting. The efficacy of the simplification is evaluated and practical limits under which the simplification can be applied are worked out. The phase difference due to variation in magnetic susceptibility property among biological tissues is another unique source of contrast which is different from the conventional T1, T2 and T2* contrast. This susceptibility based phase contrast has become more and more important at high fields, partly due to contrast generation issues due to longer T 1s and shorter T2s and partly because of the invariance of most tissue susceptibilities with field strength. This essentially ensures a constant available phase contrast between tissues across field strengths. In fact, with the increased SNR at high fields, the phase CNR actually increases with field strength which is even better. Susceptibility weighted imaging, which uniquely combines this phase and magnitude information to generate enhanced susceptibility contrast magnitude images, has proven to be an important tool in the study of various neurological conditions like, Alzheimer's, Parkinson's, Huntington's disease and multiple sclerosis even at conventional field strength of 1.5T and should have more applicability at high fields. A major issue in using phase images for susceptibility contrast, directly or as processed SWI magnitude images, is the large scale background phase variations that obscure the local susceptibility based contrast. A novel method is proposed for removing such geometrically induced large scale phase variations using a Fourier Transform based field calculation method. It is shown that the new method is capable of successfully removing the background field effects. It is shown that the new method is not only capable of successfully removing the background field effects but also helps in preserving more local phase information.

  7. Self-calibrating generalized phase-shifting interferometry of three phase-steps based on geometric concept of volume enclosed by a surface

    NASA Astrophysics Data System (ADS)

    Meneses-Fabian, Cruz

    2016-12-01

    This paper presents a non-iterative, fast, and simple algorithm for phase retrieval, in phase-shifting interferometry of three unknown and unequal phase-steps, based on the geometric concept of the volume enclosed by a surface. This approach can be divided in three stages; first the background is eliminated by the subtraction of two interferograms, for obtaining a secondary pattern; second, a surface is built by the product of two secondary patterns and the volume enclosed by this surface is computed; and third, the ratio between two enclosed volumes is approximated to a constant that depends on the phase-steps, with which a system of equations is established, and its solution allows the measurement of the phase-steps to be obtained. Additional advantages of this approach are its immunity to noise, and its capacity to support high spatial variations in the illumination. This approach is theoretically described and is numerically and experimentally verified.

  8. Phase Inversion: Inferring Solar Subphotospheric Flow and Other Asphericity from the Distortion of Acoustic Waves

    NASA Technical Reports Server (NTRS)

    Gough, Douglas; Merryfield, William J.; Toomre, Juri

    1998-01-01

    A method is proposed for analyzing an almost monochromatic train of waves propagating in a single direction in an inhomogeneous medium that is not otherwise changing in time. An effective phase is defined in terms of the Hilbert transform of the wave function, which is related, via the JWKB approximation, to the spatial variation of the background state against which the wave is propagating. The contaminating effect of interference between the truly monochromatic components of the train is eliminated using its propagation properties. Measurement errors, provided they are uncorrelated, are manifest as rapidly varying noise; although that noise can dominate the raw phase-processed signal, it can largely be removed by low-pass filtering. The intended purpose of the analysis is to determine the distortion of solar oscillations induced by horizontal structural variation and material flow. It should be possible to apply the method directly to sectoral modes. The horizontal phase distortion provides a measure of longitudinally averaged properties of the Sun in the vicinity of the equator, averaged also in radius down to the depth to which the modes penetrate. By combining such averages from different modes, the two-dimensional variation can be inferred by standard inversion techniques. After taking due account of horizontal refraction, it should be possible to apply the technique also to locally sectoral modes that propagate obliquely to the equator and thereby build a network of lateral averages at each radius, from which the full three-dimensional structure of the Sun can, in principle, be determined as an inverse Radon transform.

  9. The austral peregrine falcon: Color variation, productivity, and pesticides

    USGS Publications Warehouse

    Ellis, D.H.

    1985-01-01

    The austral peregrine falcon (Falco peregrinus cassini) was studied in the Andean foot- hills and across the Patagonian steppe from November to December 1981. The birds under study (18 pairs) were reproducing at or near normal (pre-DDT) levels for other races. Pesticide residues, while elevated, were well below the values associated with reproductive failure in other populations. With one exception, eggshells were not abnormally thin. The peregrine falcon in Patagonia exhibits extreme color variation. Pallid birds are nearly pure white below (light cream as juveniles), whereas normally pigmented birds are black-crowned and conspicuously barred with black ventrally. Rare individuals of the Normal Phase display black heads, broad black ventral barring, and warm reddish-brown ventral background coloration.

  10. Small vs. Large Convective Cloud Objects from CERES Aqua Observations: Where are the Intraseasonal Variation Signals?

    NASA Technical Reports Server (NTRS)

    Xu, Kuan-Man

    2016-01-01

    During inactive phases of Madden-Julian oscillation (MJO), there are plenty of deep but small convective systems and far fewer deep and large ones. During active phases of MJO, a manifestation of an increase in the occurrence of large and deep cloud clusters results from an amplification of large-scale motions by stronger convective heating. This study is designed to quantitatively examine the roles of small and large cloud clusters during the MJO life cycle. We analyze the cloud object data from Aqua CERES observations for tropical deep convective (DC) and cirrostratus (CS) cloud object types according to the real-time multivariate MJO index. The cloud object is a contiguous region of the earth with a single dominant cloud-system type. The size distributions, defined as the footprint numbers as a function of cloud object diameters, for particular MJO phases depart greatly from the combined (8-phase) distribution at large cloud-object diameters due to the reduced/increased numbers of cloud objects related to changes in the large-scale environments. The medium diameter corresponding to the combined distribution is determined and used to partition all cloud objects into "small" and "large" groups of a particular phase. The two groups corresponding to the combined distribution have nearly equal numbers of footprints. The medium diameters are 502 km for DC and 310 km for cirrostratus. The range of the variation between two extreme phases (typically, the most active and depressed phases) for the small group is 6-11% in terms of the numbers of cloud objects and the total footprint numbers. The corresponding range for the large group is 19-44%. In terms of the probability density functions of radiative and cloud physical properties, there are virtually no differences between the MJO phases for the small group, but there are significant differences for the large groups for both DC and CS types. These results suggest that the intreseasonal variation signals reside at the large cloud clusters while the small cloud clusters represent the background noises resulting from various types of the tropical waves with different wavenumbers and propagation directions/speeds.

  11. Per- and poly-fluoroalkyl substances (PFASs) in the urban, industrial, and background atmosphere of Northeastern China coast around the Bohai Sea: Occurrence, partitioning, and seasonal variation

    NASA Astrophysics Data System (ADS)

    Yao, Yiming; Chang, Shuai; Zhao, Yangyang; Tang, Jianhui; Sun, Hongwen; Xie, Zhiyong

    2017-10-01

    Air samples were collected using high-volume samplers at two coastal towns on the Bohai Sea in China, 320 km apart, and at a background site (North Huangcheng Island) in the Bohai Sea, 50 km from the coast. A suite of neutral and ionic per- and poly-fluoroalkyl substances (PFASs) was investigated. Urban activity was related to high levels of neutral PFASs at Tianjin while perfluorooctanoic carboxylic acid (PFOA) was dominant in the atmosphere at Weifang, possibly due to industrial sources. Polyfluoroalkyl phosphoric acid diesters (diPAPs) occurred in the particle phase only, with a total concentration range of 0.02-6.72 pg m-3. The dominant homologue was 6:2 diPAP. PFASs profiles at NHI suggested direct atmospheric transport of neutral and ionic PFASs from source regions. Temperature-dependent partitioning of fluorotelomer alcohols (FTOHs) was observed in winter, when total concentrations and particle-phase fractions of FTOHs were significantly higher as compared to those in summer. Correlation analyses suggested more active gas-phase degradation of FTOHs in summer and likely heterogeneous degradation in both seasons. Overall, it is necessary to account for ionic PFASs in both gas and particle phases and particulate matter was important for atmospheric transport and for determining the fate of PFASs, especially in areas close to a source region.

  12. [Variations of solar activity and radiation situation on board MIR station during the period 1986-1994].

    PubMed

    Bondarenko, V A; Mitrikas, V G; Tsetlin , V V

    1995-01-01

    This paper is dedicated to the analysis of the radiation situation onboard Mir station over a period of 1986-1994, there examined the main cosmophysics parameters and indices of the solar activity as well as the variations of the parameters of the earth's magnetic field and their association with the changes in the power of absorbed dose onboard the station. There noted the high levels of radiation exposure to the cosmonauts under terrestrial conditions when carrying out the roentgeno-radiologic examinations and procedures comparable or exceeding the absorbed doses during the flights. For revealing the regular associations of the radiation situation onboard the station with the parameters of solar activity there has been analyzed the time changes of average monthly values of dose power since the beginning of station functioning in 1986 until returning the fifteenth expedition to Earth. From the analyses of the results it might be assumed that the best statistical associations of average monthly power of the absorbed dose are found with the streams of protons of GCR. Wolff numbers and background stream of the radio emission of the Sun which reflects the existence of the radiation situation upon the phase of solar activity cycle. From this paper it transpires that calculating the dose loads during the period of the extreme phases of solar activity, it is possible to make between them the interpolations of time dependence by analogy with the dynamics in time of the background streams of GCR or Wolff numbers.

  13. Visual signal detection in structured backgrounds. II. Effects of contrast gain control, background variations, and white noise

    NASA Technical Reports Server (NTRS)

    Eckstein, M. P.; Ahumada, A. J. Jr; Watson, A. B.

    1997-01-01

    Studies of visual detection of a signal superimposed on one of two identical backgrounds show performance degradation when the background has high contrast and is similar in spatial frequency and/or orientation to the signal. To account for this finding, models include a contrast gain control mechanism that pools activity across spatial frequency, orientation and space to inhibit (divisively) the response of the receptor sensitive to the signal. In tasks in which the observer has to detect a known signal added to one of M different backgrounds grounds due to added visual noise, the main sources of degradation are the stochastic noise in the image and the suboptimal visual processing. We investigate how these two sources of degradation (contrast gain control and variations in the background) interact in a task in which the signal is embedded in one of M locations in a complex spatially varying background (structured background). We use backgrounds extracted from patient digital medical images. To isolate effects of the fixed deterministic background (the contrast gain control) from the effects of the background variations, we conduct detection experiments with three different background conditions: (1) uniform background, (2) a repeated sample of structured background, and (3) different samples of structured background. Results show that human visual detection degrades from the uniform background condition to the repeated background condition and degrades even further in the different backgrounds condition. These results suggest that both the contrast gain control mechanism and the background random variations degrade human performance in detection of a signal in a complex, spatially varying background. A filter model and added white noise are used to generate estimates of sampling efficiencies, an equivalent internal noise, an equivalent contrast-gain-control-induced noise, and an equivalent noise due to the variations in the structured background.

  14. Modulation of the atmospheric quasi-biweekly oscillation on the diurnal variation of the occurrence frequency of the Tibetan Plateau vortices

    NASA Astrophysics Data System (ADS)

    Li, Lun; Zhang, Renhe; Wen, Min

    2018-06-01

    In this study, modulation of the atmospheric quasi-biweekly oscillation (QBWO) on diurnal variation of the occurrence frequency of Tibetan Plateau vortices (TPVs) during May-August of 2000-2009 was investigated. The diurnal variations of the occurrence frequency of the TPVs (OFTPVs) and the related dynamic and thermodynamic features in the positive and negative phases of QBWO were compared. In both the positive and negative phases, the OFTPVs reaches the maximum from evening to midnight (18-00 LT, LT indicates the local time), and minimum from early morning to noon (06-12 LT). At 18 LT, there is strongest convergence at 500 hPa and ascending motion, as well as the most abundant net water vapor budget over the Tibetan Plateau, which is in favor of the precipitation and the related condensation latent heat release, corresponding to the maximum of OFTPVs in 18-00 LT. On the contrary, in the early morning at 06 LT, the conditions are most unfavorable for genesis of TPVs in 06-12 LT. QBWO leads to stronger convergence at 500 hPa, ascending motion as well as more massive water vapor in the positive phases than those in the negative phases, resulting in larger numbers of TPVs occur in all of the four periods of a day (00-06 LT, 06-12 LT, 12-18 LT, and 18-00 LT) in the former. The TPVs generating from the early morning to noon (06-12 LT) are weaker and more sensitive and fragile to the disadvantageous background, while the TPVs occurring from evening to midnight (18-00 LT) are stronger and seem to be well tolerated, leading to more remarkable contrast between the OFTPVs in the negative and positive phases in 06-12 LT than in 18-00 LT.

  15. Brominated flame retardants in Chinese air before and after the phase out of polybrominated diphenyl ethers

    NASA Astrophysics Data System (ADS)

    Li, Wen-Long; Qi, Hong; Ma, Wan-Li; Liu, Li-Yan; Zhang, Zhi; Mohammed, Mohammed O. A.; Song, Wei-Wei; Zhang, Zifeng; Li, Yi-Fan

    2015-09-01

    Brominated flame retardants (BFRs), including polybrominated diphenyl ethers (PBDEs) and novel non-BDE flame retardants (NBFRs), were analyzed in Chinese air during China's POPs Soil and Air Monitoring Program Phase I (SAMP-I) and Phase II (SAMP-II). The levels of Σ12PBDEs and Σ6NBFRs in urban sites were significantly higher than those in rural sites and background sites. The higher detection rate and concentrations of high molecular weight PBDEs and NBFRs in Phase II indicated the changing of the commercial pattern of BFRs after the phase out of PBDEs in China. Temperature was the major factor affecting the seasonal variations of molecular weight BFRs in atmosphere. A significant correlation between BFRs concentration and gross domestic product (GDP) was observed, with the GDP parameter explained 59.4% and 72.7% of the total variability for Octa-BDEs and low molecular weight NBFRs, respectively. Our findings indicated an evolving commercial usage of BFRs from SAMP-I to SAMP-II, i.e. shifting from lower molecular weight to higher molecular weight congeners in China.

  16. Detectability index of differential phase contrast CT compared with conventional CT: a preliminary channelized Hotelling observer study

    NASA Astrophysics Data System (ADS)

    Tang, Xiangyang; Yang, Yi; Tang, Shaojie

    2013-03-01

    Under the framework of model observer with signal and background exactly known (SKE/BKE), we investigate the detectability of differential phase contrast CT compared with that of the conventional attenuation-based CT. Using the channelized Hotelling observer and the radially symmetric difference-of-Gaussians channel template , we investigate the detectability index and its variation over the dimension of object and detector cells. The preliminary data show that the differential phase contrast CT outperforms the conventional attenuation-based CT significantly in the detectability index while both the object to be detected and the cell of detector used for data acquisition are relatively small. However, the differential phase contrast CT's dominance in the detectability index diminishes with increasing dimension of either object or detector cell, and virtually disappears while the dimension of object or detector cell approaches a threshold, respectively. It is hoped that the preliminary data reported in this paper may provide insightful understanding of the differential phase contrast CT's characteristic in the detectability index and its comparison with that of the conventional attenuation-based CT.

  17. Hawking radiation and classical tunneling: A ray phase space approach

    NASA Astrophysics Data System (ADS)

    Tracy, E. R.; Zhigunov, D.

    2016-01-01

    Acoustic waves in fluids undergoing the transition from sub- to supersonic flow satisfy governing equations similar to those for light waves in the immediate vicinity of a black hole event horizon. This acoustic analogy has been used by Unruh and others as a conceptual model for "Hawking radiation." Here, we use variational methods, originally introduced by Brizard for the study of linearized MHD, and ray phase space methods, to analyze linearized acoustics in the presence of background flows. The variational formulation endows the evolution equations with natural Hermitian and symplectic structures that prove useful for later analysis. We derive a 2 × 2 normal form governing the wave evolution in the vicinity of the "event horizon." This shows that the acoustic model can be reduced locally (in ray phase space) to a standard (scalar) tunneling process weakly coupled to a unidirectional non-dispersive wave (the "incoming wave"). Given the normal form, the Hawking "thermal spectrum" can be derived by invoking standard tunneling theory, but only by ignoring the coupling to the incoming wave. Deriving the normal form requires a novel extension of the modular ray-based theory used previously to study tunneling and mode conversion in plasmas. We also discuss how ray phase space methods can be used to change representation, which brings the problem into a form where the wave functions are less singular than in the usual formulation, a fact that might prove useful in numerical studies.

  18. A Different View of Solar Spectral Irradiance Variations: Modeling Total Energy over Six-Month Intervals.

    PubMed

    Woods, Thomas N; Snow, Martin; Harder, Jerald; Chapman, Gary; Cookson, Angela

    A different approach to studying solar spectral irradiance (SSI) variations, without the need for long-term (multi-year) instrument degradation corrections, is examining the total energy of the irradiance variation during 6-month periods. This duration is selected because a solar active region typically appears suddenly and then takes 5 to 7 months to decay and disperse back into the quiet-Sun network. The solar outburst energy, which is defined as the irradiance integrated over the 6-month period and thus includes the energy from all phases of active region evolution, could be considered the primary cause for the irradiance variations. Because solar cycle variation is the consequence of multiple active region outbursts, understanding the energy spectral variation may provide a reasonable estimate of the variations for the 11-year solar activity cycle. The moderate-term (6-month) variations from the Solar Radiation and Climate Experiment (SORCE) instruments can be decomposed into positive (in-phase with solar cycle) and negative (out-of-phase) contributions by modeling the variations using the San Fernando Observatory (SFO) facular excess and sunspot deficit proxies, respectively. These excess and deficit variations are fit over 6-month intervals every 2 months over the mission, and these fitted variations are then integrated over time for the 6-month energy. The dominant component indicates which wavelengths are in-phase and which are out-of-phase with solar activity. The results from this study indicate out-of-phase variations for the 1400 - 1600 nm range, with all other wavelengths having in-phase variations.

  19. Spatial-frequency spectrum of patterns changes the visibility of spatial-phase differences

    NASA Technical Reports Server (NTRS)

    Lawton, T. B.

    1985-01-01

    It is shown that spatial-frequency components over a 4-octave range affected the visibility of spatial-phase differences. Contrast thresholds were measured for discrimination between two (+45- and -45-deg) spatial phases of a sinusoidal test grating added to a background grating. The background could contain one or several sinusoidal components, all in 0-deg phase. Phase differences between the test and the background were visible at lower contrasts when test and background frequencies were harmonically related than when they were not, when test and background frequencies were within 1 octave than when they were farther apart, when the fundamental frequency of the background was low than when it was high, and for some discriminations more than for others, after practice. The visibility of phase differences was not affected by additional components in the background if the fundamental and difference frequencies of the background remained unchanged. Observers' reports of their strategies gave information about the types of attentive processing that were used to discriminate phase differences. Attentive processing facilitated phase discrimination for multifrequency gratings spanning a much wider range of spatial frequencies than would be possible by using only local preattentive processing. These results were consistent with the visibility of phase differences being processed by some combination of even- and odd-symmetric simple cells tuned to a wide range of different spatial frequencies.

  20. Phase rainbow refractometry for accurate droplet variation characterization.

    PubMed

    Wu, Yingchun; Promvongsa, Jantarat; Saengkaew, Sawitree; Wu, Xuecheng; Chen, Jia; Gréhan, Gérard

    2016-10-15

    We developed a one-dimensional phase rainbow refractometer for the accurate trans-dimensional measurements of droplet size on the micrometer scale as well as the tiny droplet diameter variations at the nanoscale. The dependence of the phase shift of the rainbow ripple structures on the droplet variations is revealed. The phase-shifting rainbow image is recorded by a telecentric one-dimensional rainbow imaging system. Experiments on the evaporating monodispersed droplet stream show that the phase rainbow refractometer can measure the tiny droplet diameter changes down to tens of nanometers. This one-dimensional phase rainbow refractometer is capable of measuring the droplet refractive index and diameter, as well as variations.

  1. Image processing of vaporizing GDI sprays: a new curvature-based approach

    NASA Astrophysics Data System (ADS)

    Lazzaro, Maurizio; Ianniello, Roberto

    2018-01-01

    This article introduces an innovative method for the segmentation of Mie-scattering and schlieren images of GDI sprays. The contours of the liquid phase are obtained by segmenting the scattering images of the spray by means of optimal filtering of the image, relying on variational methods, and an original thresholding procedure based on an iterative application of Otsu’s method. The segmentation of schlieren images, to get the contours of the spray vapour phase, is obtained by exploiting the surface curvature of the image to strongly enhance the intensity texture due to the vapour density gradients. This approach allows one to unambiguously discern the whole vapour phase of the spray from the background. Additional information about the spray liquid phase can be obtained by thresholding filtered schlieren images. The potential of this method has been substantiated in the segmentation of schlieren and scattering images of a GDI spray of isooctane. The fuel, heated to 363 K, was injected into nitrogen at a density of 1.12 and 3.5 kg m-3 with temperatures of 333 K and 573 K.

  2. Daily cycling of nitric oxide synthase (NOS) in the hippocampus of pigeons (C. livia)

    PubMed Central

    2013-01-01

    Background Nitric oxide synthase (NOS) is essential for the synthesis of nitric oxide (NO), a non-conventional neurotransmitter with an important role in synaptic plasticity underlying processes of hippocampus-dependent memory and in the regulation of biological clocks and circadian rhythms. Many studies have shown that both the NOS cytosolic protein content and its enzymatic activity present a circadian variation in different regions of the rodent brain, including the hippocampus. The present study investigated the daily variation of NOS enzymatic activity and the cytosolic content of nNOS in the hippocampus of pigeons. Results Adult pigeons kept under a skeleton photoperiod were assigned to six different groups. Homogenates of the hippocampus obtained at six different times-of-day were used for NOS analyses. Both iNOS activity and nNOS cytosolic protein concentrations were highest during the subjective light phase and lowest in the subjective dark phase of the circadian period. ANOVA showed significant time differences for iNOS enzymatic activity (p < 0.05) and for nNOS protein content (p < 0.05) in the hippocampus. A significant daily rhythm for both iNOS and nNOS was confirmed by analysis with the Cosinor method (p < 0.05). The present findings indicate that the enzymatic activity of iNOS and content of nNOS protein in the hippocampus of pigeons exhibit a daily rhythm, with acrophase values occurring during the behavioral activity phase. Conclusions The data corroborate the reports on circadian variation of NOS in the mammalian hippocampus and can be considered indicative of a dynamic interaction between hippocampus-dependent processes and circadian clock mechanisms. PMID:24176048

  3. Filter paper solid-phase radioimmunoassay for human rotavirus surface immunoglobulins.

    PubMed Central

    Watanabe, H; Holmes, I H

    1977-01-01

    A filter paper solid-phase radioimmunoassay has been developed. Filter paper disks adsorbed a large amount of rotavirus and serum globulin and gave small mean variation of coating and low background binding. The rotavirus isolated from stools from infants with acute enteritis 1, 3, and 4 days after onset of symptoms was shown to be already covered with immunoglobulin G (IgG), IgA, and IgM antibodies by this radioimmunoassay, by immunoelectrophoresis, and by immune electron microscopy. The immunoglobulins covering the virus particle were partially separated during 125I labeling and eluted at the position expected for IgG during Sephadex G-200 gel filtration. Rabbit antiserum prepared against purified fecal rotavirus contained not only rotavirus antibodies but also a fairly large amount of immunoglobulin antibody, reflecting the antibodies on the rotavirus particle surface. Images PMID:199613

  4. Weak-signal Phase Calibration Strategies for Large DSN Arrays

    NASA Technical Reports Server (NTRS)

    Jones, Dayton L.

    2005-01-01

    The NASA Deep Space Network (DSN) is studying arrays of large numbers of small, mass-produced radio antennas as a cost-effective way to increase downlink sensitivity and data rates for future missions. An important issue for the operation of large arrays is the accuracy with which signals from hundreds of small antennas can be combined. This is particularly true at Ka band (32 GHz) where atmospheric phase variations can be large and rapidly changing. A number of algorithms exist to correct the phases of signals from individual antennas in the case where a spacecraft signal provides a useful signal-to-noise ratio (SNR) on time scales shorter than the atmospheric coherence time. However, for very weak spacecraft signals it will be necessary to rely on background natural radio sources to maintain array phasing. Very weak signals could result from a spacecraft emergency or by design, such as direct-to-Earth data transmissions from distant planetary atmospheric or surface probes using only low gain antennas. This paper considers the parameter space where external real-time phase calibration will be necessary, and what this requires in terms of array configuration and signal processing. The inherent limitations of this technique are also discussed.

  5. Inter- and Intraspecific Variation in the Germination Response to Light Quality and Scarification in Grasses Growing in Two-phase Mosaics of the Chihuahuan Desert

    PubMed Central

    PEZZANI, FABIANA; MONTAÑA, CARLOS

    2006-01-01

    • Background and Aims In many locations, plants are faced with adjacent, contrasting environments, and the between-species differential evolution of life history traits can be interpreted as an evolutionary response to this environmental heterogeneity. However, there has been little research on the intraspecific variability in these attributes as a possible evolutionary response of plants. • Methods In the two-phase mosaic of the Chihuahuan Desert (adjacent patches with contrasting resource availability), analyses were carried out of the germination response to the scarification and light quality to which grass seeds growing on these patches are exposed (open and closed habitats). • Key Results Species that grow in open habitats exhibited a higher germination success than those from closed habitats after scarification. At both the inter- and intraspecific level, there were differences in the germination percentage and in the germination speed in response to light quality. Intraspecific variation in the species from the closed habitat (Pleuraphis mutica and Trichloris crinita) and in Chloris virgata (which grows in both habitats) was due to genetic variation (the family factor was significant), but there was no genetic variation in phenotypic plasticity (non-significant interaction between family and light quality). In contrast, for the species that grows only in the open habitat (Dasyochloa pulchella), the family did not have a significant effect, but there was genetic variation in the phenotypic plasticity (significant interaction between family and light quality). • Conclusions In C. virgata, P. mutica and T. crinita, natural selection could be favouring those genotypes that responded better in each light environment, but it is not possible that the natural selection resulted in different optimal phenotypes in each habitat. On the contrary, in D. pulchella, selection could have reduced the genetic variation, but there is the possibility of the evolution of reaction norms, resulting in the selection of alternative phenotypes for each habitat. PMID:16621861

  6. Genetic Background and Environment Influence the Effects of Mutations in pykF and Help Reveal Mechanisms Underlying Their Benefit

    DTIC Science & Technology

    2015-08-01

    another trait (Losos 2011). All of these factors make it hard to identify adaptations. Mutations are the ultimate source of genetic variation that is...effects when added to the same evolved background (See Table 2.2 for results of one-way ANOVAs). Genetic background explains most (~ 88%) of the variation ...in fitness whereas the variation explained by different pykF alleles is negligible (~2%) compared to statistical noise (~8%) (Table 2.3). These

  7. Areal Mass Oscillations in Planar Targets Due to Feedout: Theory and Simulations.

    NASA Astrophysics Data System (ADS)

    Velikovich, A. L.; Schmitt, A. J.; Karasik, M.; Obenschain, S. P.; Serlin, V.; Pawley, C. J.; Gardner, J. H.; Aglitskiy, Y.; Metzler, N.

    2001-10-01

    When a planar shock wave breaks out at a rippled rear surface of a laser-driven target, the lateral pressure gradient in a rippled rarefaction wave propagating back to the front surface causes a lateral mass redistribution that reverses the phase of mass variation. If the driving laser pulse has no foot, then the RT growth, starting when the rarefaction wave reaches the front surface, causes the second phase reversal of mass variation, and continues at the initial phase, as consistently observed in feedout experiments on Nike. A foot of the laser pulse can cause an early phase reversal of mass variation, making the strong shock wave driven by the main pulse interact with a density variation in a rippled rarefaction wave rather than with static rear surface ripples. Theory and simulations predict that this interaction can make the phase of mass variation reverse one or three times. Then the phase of the RT growing mode would be opposite to that of the initial mass variation.

  8. Establishment of an international database for genetic variants in esophageal cancer.

    PubMed

    Vihinen, Mauno

    2016-10-01

    The establishment of a database has been suggested in order to collect, organize, and distribute genetic information about esophageal cancer. The World Organization for Specialized Studies on Diseases of the Esophagus and the Human Variome Project will be in charge of a central database of information about esophageal cancer-related variations from publications, databases, and laboratories; in addition to genetic details, clinical parameters will also be included. The aim will be to get all the central players in research, clinical, and commercial laboratories to contribute. The database will follow established recommendations and guidelines. The database will require a team of dedicated curators with different backgrounds. Numerous layers of systematics will be applied to facilitate computational analyses. The data items will be extensively integrated with other information sources. The database will be distributed as open access to ensure exchange of the data with other databases. Variations will be reported in relation to reference sequences on three levels--DNA, RNA, and protein-whenever applicable. In the first phase, the database will concentrate on genetic variations including both somatic and germline variations for susceptibility genes. Additional types of information can be integrated at a later stage. © 2016 New York Academy of Sciences.

  9. Natural abundance deuterium and 18-oxygen effects on the precision of the doubly labeled water method

    NASA Technical Reports Server (NTRS)

    Horvitz, M. A.; Schoeller, D. A.

    2001-01-01

    The doubly labeled water method for measuring total energy expenditure is subject to error from natural variations in the background 2H and 18O in body water. There is disagreement as to whether the variations in background abundances of the two stable isotopes covary and what relative doses of 2H and 18O minimize the impact of variation on the precision of the method. We have performed two studies to investigate the amount and covariance of the background variations. These were a study of urine collected weekly from eight subjects who remained in the Madison, WI locale for 6 wk and frequent urine samples from 14 subjects during round-trip travel to a locale > or = 500 miles from Madison, WI. Background variation in excess of analytical error was detected in six of the eight nontravelers, and covariance was demonstrated in four subjects. Background variation was detected in all 14 travelers, and covariance was demonstrated in 11 subjects. The median slopes of the regression lines of delta2H vs. delta18O were 6 and 7, respectively. Modeling indicated that 2H and 18O doses yielding a 6:1 ratio of final enrichments should minimize this error introduced to the doubly labeled water method.

  10. Natural abundance deuterium and 18-oxygen effects on the precision of the doubly labeled water method.

    PubMed

    Horvitz, M A; Schoeller, D A

    2001-06-01

    The doubly labeled water method for measuring total energy expenditure is subject to error from natural variations in the background 2H and 18O in body water. There is disagreement as to whether the variations in background abundances of the two stable isotopes covary and what relative doses of 2H and 18O minimize the impact of variation on the precision of the method. We have performed two studies to investigate the amount and covariance of the background variations. These were a study of urine collected weekly from eight subjects who remained in the Madison, WI locale for 6 wk and frequent urine samples from 14 subjects during round-trip travel to a locale > or = 500 miles from Madison, WI. Background variation in excess of analytical error was detected in six of the eight nontravelers, and covariance was demonstrated in four subjects. Background variation was detected in all 14 travelers, and covariance was demonstrated in 11 subjects. The median slopes of the regression lines of delta2H vs. delta18O were 6 and 7, respectively. Modeling indicated that 2H and 18O doses yielding a 6:1 ratio of final enrichments should minimize this error introduced to the doubly labeled water method.

  11. Pattern and forcing of Northern Hemisphere glacier variations during the last millennium

    NASA Astrophysics Data System (ADS)

    Porter, Stephen C.

    1986-07-01

    Time series depicting mountain glacier fluctuations in the Alps display generally similar patterns over the last two centuries, as do chronologies of glacier variations for the same interval from elsewhere in the Northern Hemisphere. Episodes of glacier advance consistently are associated with intervals of high average volcanic aerosol production, as inferred from acidity variations in a Greenland ice core. Advances occur whenever acidity levels rise sharply from background values to reach concentrations ≥1.2 μequiv H +/kg above background. A phase lag of about 10-15 yr, equivalent to reported response lags of Alpine glacier termini, separates the beginning of acidity increases from the beginning of subsequent ice advances. A similar relationship, but based on limited and less-reliable historical data and on lichenometric ages, is found for the preceding 2 centuries. Calibrated radiocarbon dates related to advances of non-calving and non-surging glaciers during the earlier part of the Little Ice Age display a comparable consistent pattern. An interval of reduced acidity values between about 1090 and 1230 A.D. correlates with a time of inferred glacier contraction during the Medieval Optimum. The observed close relation between Noothern Hemisphere glacier fluctuations and variations in Greenland ice-core acidity suggests that sulfur-rich aerosols generated by volcanic eruptions are a primary forcing mechanism of glacier fluctuations, and therefore of climate, on a decadal scale. The amount of surface cooling attributable to individual large eruptions or to episodes of eruptions is simlar to the probable average temperature reduction during culminations of Little Ice Age alacier advances (ca. 0.5°-1.2°C), as inferred from depression of equilibrium-line altitudes.

  12. Precise interpolar phasing of abrupt climate change during the last ice age.

    PubMed

    2015-04-30

    The last glacial period exhibited abrupt Dansgaard-Oeschger climatic oscillations, evidence of which is preserved in a variety of Northern Hemisphere palaeoclimate archives. Ice cores show that Antarctica cooled during the warm phases of the Greenland Dansgaard-Oeschger cycle and vice versa, suggesting an interhemispheric redistribution of heat through a mechanism called the bipolar seesaw. Variations in the Atlantic meridional overturning circulation (AMOC) strength are thought to have been important, but much uncertainty remains regarding the dynamics and trigger of these abrupt events. Key information is contained in the relative phasing of hemispheric climate variations, yet the large, poorly constrained difference between gas age and ice age and the relatively low resolution of methane records from Antarctic ice cores have so far precluded methane-based synchronization at the required sub-centennial precision. Here we use a recently drilled high-accumulation Antarctic ice core to show that, on average, abrupt Greenland warming leads the corresponding Antarctic cooling onset by 218 ± 92 years (2σ) for Dansgaard-Oeschger events, including the Bølling event; Greenland cooling leads the corresponding onset of Antarctic warming by 208 ± 96 years. Our results demonstrate a north-to-south directionality of the abrupt climatic signal, which is propagated to the Southern Hemisphere high latitudes by oceanic rather than atmospheric processes. The similar interpolar phasing of warming and cooling transitions suggests that the transfer time of the climatic signal is independent of the AMOC background state. Our findings confirm a central role for ocean circulation in the bipolar seesaw and provide clear criteria for assessing hypotheses and model simulations of Dansgaard-Oeschger dynamics.

  13. Prediction of solar activity from solar background magnetic field variations in cycles 21-23

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shepherd, Simon J.; Zharkov, Sergei I.; Zharkova, Valentina V., E-mail: s.j.shepherd@brad.ac.uk, E-mail: s.zharkov@hull.ac.uk, E-mail: valentina.zharkova@northumbria.ac.uk

    2014-11-01

    A comprehensive spectral analysis of both the solar background magnetic field (SBMF) in cycles 21-23 and the sunspot magnetic field in cycle 23 reported in our recent paper showed the presence of two principal components (PCs) of SBMF having opposite polarity, e.g., originating in the northern and southern hemispheres, respectively. Over a duration of one solar cycle, both waves are found to travel with an increasing phase shift toward the northern hemisphere in odd cycles 21 and 23 and to the southern hemisphere in even cycle 22. These waves were linked to solar dynamo waves assumed to form in differentmore » layers of the solar interior. In this paper, for the first time, the PCs of SBMF in cycles 21-23 are analyzed with the symbolic regression technique using Hamiltonian principles, allowing us to uncover the underlying mathematical laws governing these complex waves in the SBMF presented by PCs and to extrapolate these PCs to cycles 24-26. The PCs predicted for cycle 24 very closely fit (with an accuracy better than 98%) the PCs derived from the SBMF observations in this cycle. This approach also predicts a strong reduction of the SBMF in cycles 25 and 26 and, thus, a reduction of the resulting solar activity. This decrease is accompanied by an increasing phase shift between the two predicted PCs (magnetic waves) in cycle 25 leading to their full separation into the opposite hemispheres in cycle 26. The variations of the modulus summary of the two PCs in SBMF reveals a remarkable resemblance to the average number of sunspots in cycles 21-24 and to predictions of reduced sunspot numbers compared to cycle 24: 80% in cycle 25 and 40% in cycle 26.« less

  14. A wide-band fiber optic frequency distribution system employing thermally controlled phase compensation

    NASA Technical Reports Server (NTRS)

    Johnson, Dean; Calhoun, Malcolm; Sydnor, Richard; Lutes, George

    1993-01-01

    An active wide-band fiber optic frequency distribution system employing a thermally controlled phase compensator to stabilize phase variations induced by environmental temperature changes is described. The distribution system utilizes bidirectional dual wavelength transmission to provide optical feedback of induced phase variations of 100 MHz signals propagating along the distribution cable. The phase compensation considered differs from earlier narrow-band phase compensation designs in that it uses a thermally controlled fiber delay coil rather than a VCO or phase modulation to compensate for induced phase variations. Two advantages of the wide-band system over earlier designs are (1) that it provides phase compensation for all transmitted frequencies, and (2) the compensation is applied after the optical interface rather than electronically ahead of it as in earlier schemes. Experimental results on the first prototype shows that the thermal stabilizer reduces phase variations and Allan deviation by a factor of forty over an equivalent uncompensated fiber optic distribution system.

  15. New global electron density observations from GPS-RO in the D- and E-Region ionosphere

    NASA Astrophysics Data System (ADS)

    Wu, Dong L.

    2018-06-01

    A novel retrieval technique is developed for electron density (Ne) in the D- and E-region (80-120 km) using the high-quality 50-Hz GPS radio occultation (GPS-RO) phase measurements. The new algorithm assumes a slow, linear variation in the F-region background when the GPS-RO passes through the D- and E-region, and extracts the Ne profiles at 80-130 km from the phase advance signal caused by Ne. Unlike the conventional Abel function, the new approach produces a sharp Ne weighting function in the lower ionosphere, and the Ne retrievals are in good agreement with the IRI (International Reference Ionosphere) model in terms of monthly maps, zonal means and diurnal variations. The daytime GPS-RO Ne profiles can be well characterized by the α-Chapman function of three parameters (NmE, hmE and H), showing that the bottom of E-region is deepening and sharpening towards the summer pole. At high latitudes the monthly GPS-RO Ne maps at 80-120 km reveal clear enhancement in the auroral zones, more prominent at night, as a result of energetic electron precipitation (EEP) from the outer radiation belt. The D-/E-region auroral Ne is strongly correlated with Kp on a daily basis. The new Ne data allow further comprehensive analyses of the sporadic E (Es) phenomena in connection with the background Ne in the E-region. The layered (2-10 km) and fluctuated (<2 km) Es components, namely Ne_Layer than Ne_Pert, are extracted with respect to the background Ne_Region on a profile-by-profile basis. The Ne_Layer component has a strong but highly-refined peak at ∼105 km, with an amplitude smaller than Ne_Region approximately by an order of magnitude. The Ne_Pert component, which was studied extensively in the past, is ∼2 orders of magnitude weaker than Ne_Layer. Both Ne_Layer and Ne_Pert are subject to significant diurnal and semidiurnal variations, showing downward progression with local time in amplitude. The 11-year solar cycle dominates the Ne interannual variations, showing larger Ne_Region and Ne_Layer but smaller Ne_Pert amplitudes in the solar maximum years. Enhanced Ne profiles are often observed in the polar winter, showing good correlation with solar proton events (SPEs) and geomagnetic activity. The new methodology offers great potential for retrieving low Ne in the D-region, where radio propagation and communication blackouts can occur due to enhanced ionization. For space weather applications it is recommended for GPS-RO operations to raise the top of high-rate data acquisition to ∼140 km in the future.

  16. Investigation of effects of background water on upwelled reflectance spectra and techniques for analysis of dilute primary-treated sewage sludge

    NASA Technical Reports Server (NTRS)

    Whitlock, C. H.; Usry, J. W.; Witte, W. G.; Farmer, F. H.; Gurganus, E. A.

    1979-01-01

    In an effort to improve understanding of the effects of variations in background water on reflectance spectra, laboratory tests were conducted with various concentrations of sewage sludge diluted with several types of background water. The results from these tests indicate that reflectance spectra for sewage-sludge mixtures are dependent upon the reflectance of the background water. Both the ratio of sewage-sludge reflectance to background-water reflectance and the ratio of the difference in reflectance to background-water reflectance show spectral variations for different turbid background waters. The difference in reflectance is the only parameter considered.

  17. B1- non-uniformity correction of phased-array coils without measuring coil sensitivity.

    PubMed

    Damen, Frederick C; Cai, Kejia

    2018-04-18

    Parallel imaging can be used to increase SNR and shorten acquisition times, albeit, at the cost of image non-uniformity. B 1 - non-uniformity correction techniques are confounded by signal that varies not only due to coil induced B 1 - sensitivity variation, but also the object's own intrinsic signal. Herein, we propose a method that makes minimal assumptions and uses only the coil images themselves to produce a single combined B 1 - non-uniformity-corrected complex image with the highest available SNR. A novel background noise classifier is used to select voxels of sufficient quality to avoid the need for regularization. Unique properties of the magnitude and phase were used to reduce the B 1 - sensitivity to two joint additive models for estimation of the B 1 - inhomogeneity. The complementary corruption of the imaged object across the coil images is used to abate individual coil correction imperfections. Results are presented from two anatomical cases: (a) an abdominal image that is challenging in both extreme B 1 - sensitivity and intrinsic tissue signal variation, and (b) a brain image with moderate B 1 - sensitivity and intrinsic tissue signal variation. A new relative Signal-to-Noise Ratio (rSNR) quality metric is proposed to evaluate the performance of the proposed method and the RF receiving coil array. The proposed method has been shown to be robust to imaged objects with widely inhomogeneous intrinsic signal, and resilient to poorly performing coil elements. Copyright © 2018. Published by Elsevier Inc.

  18. Design of a Comprehensive Biochemistry and Molecular Biology Experiment: Phase Variation Caused by Recombinational Regulation of Bacterial Gene Expression

    ERIC Educational Resources Information Center

    Sheng, Xiumei; Xu, Shungao; Lu, Renyun; Isaac, Dadzie; Zhang, Xueyi; Zhang, Haifang; Wang, Huifang; Qiao, Zheng; Huang, Xinxiang

    2014-01-01

    Scientific experiments are indispensable parts of Biochemistry and Molecular Biology. In this study, a comprehensive Biochemistry and Molecular Biology experiment about "Salmonella enterica" serovar Typhi Flagellar phase variation has been designed. It consisted of three parts, namely, inducement of bacterial Flagellar phase variation,…

  19. Passage of Campylobacter jejuni through the chicken reservoir or mice promotes phase variation in contingency genes Cj0045 and Cj0170 that strongly associates with colonization and disease in a mouse model

    PubMed Central

    Kim, Joo-Sung; Artymovich, Katherine A.; Hall, David F.; Smith, Eric J.; Fulton, Richard; Bell, Julia; Dybas, Leslie; Mansfield, Linda S.; Tempelman, Robert; Wilson, David L.

    2012-01-01

    Human illness due to Camplyobacter jejuni infection is closely associated with consumption of poultry products. We previously demonstrated a 50 % shift in allele frequency (phase variation) in contingency gene Cj1139 (wlaN) during passage of C. jejuni NCTC11168 populations through Ross 308 broiler chickens. We hypothesized that phase variation in contingency genes during chicken passage could promote subsequent colonization and disease in humans. To test this hypothesis, we passaged C. jejuni strains NCTC11168, 33292, 81-176, KanR4 and CamR2 through broiler chickens and analysed the ability of passaged and non-passaged populations to colonize C57BL6 IL-10-deficient mice, our model for human colonization and disease. We utilized fragment analysis and nucleotide sequence analysis to measure phase variation in contingency genes. Passage through the chicken reservoir promoted phase variation in five specific contingency genes, and these ‘successful’ populations colonized mice. When phase variation did not occur in these same five contingency genes during chicken passage, these ‘unsuccessful’ populations failed to colonize mice. Phase variation during chicken passage generated small insertions or deletions (indels) in the homopolymeric tract (HT) in contingency genes. Single-colony isolates of C. jejuni strain KanR4 carrying an allele of contingency gene Cj0170 with a10G HT colonized mice at high frequency and caused disease symptoms, whereas single-colony isolates carrying the 9G allele failed to colonize mice. Supporting results were observed for the successful 9G allele of Cj0045 in strain 33292. These data suggest that phase variation in Cj0170 and Cj0045 is strongly associated with mouse colonization and disease, and that the chicken reservoir can play an active role in natural selection, phase variation and disease. PMID:22343355

  20. Passage of Campylobacter jejuni through the chicken reservoir or mice promotes phase variation in contingency genes Cj0045 and Cj0170 that strongly associates with colonization and disease in a mouse model.

    PubMed

    Kim, Joo-Sung; Artymovich, Katherine A; Hall, David F; Smith, Eric J; Fulton, Richard; Bell, Julia; Dybas, Leslie; Mansfield, Linda S; Tempelman, Robert; Wilson, David L; Linz, John E

    2012-05-01

    Human illness due to Camplyobacter jejuni infection is closely associated with consumption of poultry products. We previously demonstrated a 50 % shift in allele frequency (phase variation) in contingency gene Cj1139 (wlaN) during passage of C. jejuni NCTC11168 populations through Ross 308 broiler chickens. We hypothesized that phase variation in contingency genes during chicken passage could promote subsequent colonization and disease in humans. To test this hypothesis, we passaged C. jejuni strains NCTC11168, 33292, 81-176, KanR4 and CamR2 through broiler chickens and analysed the ability of passaged and non-passaged populations to colonize C57BL6 IL-10-deficient mice, our model for human colonization and disease. We utilized fragment analysis and nucleotide sequence analysis to measure phase variation in contingency genes. Passage through the chicken reservoir promoted phase variation in five specific contingency genes, and these 'successful' populations colonized mice. When phase variation did not occur in these same five contingency genes during chicken passage, these 'unsuccessful' populations failed to colonize mice. Phase variation during chicken passage generated small insertions or deletions (indels) in the homopolymeric tract (HT) in contingency genes. Single-colony isolates of C. jejuni strain KanR4 carrying an allele of contingency gene Cj0170 with a10G HT colonized mice at high frequency and caused disease symptoms, whereas single-colony isolates carrying the 9G allele failed to colonize mice. Supporting results were observed for the successful 9G allele of Cj0045 in strain 33292. These data suggest that phase variation in Cj0170 and Cj0045 is strongly associated with mouse colonization and disease, and that the chicken reservoir can play an active role in natural selection, phase variation and disease.

  1. Spatio-Temporal Variability of the Phase of Total Ozone Quasi-Decennial Oscillations

    NASA Astrophysics Data System (ADS)

    Visheratin, K. N.

    2017-12-01

    The SBUV/SBUV2 (65° S-65° N) and Bodeker Scientific (90° S-90° N) satellite databases have been used for composite and cross-wavelet analyses of the spatio-temporal variability of phase relations between a 11-year cycle of solar activity (SA) and quasi-decennial oscillations (QDOs) of total ozone content (TOC). For globally average TOC values, the QDO maxima coincide in phase with the solar-activity maxima, and amplitude variations of TOC correlate with those of the 11-year solar cycle. According to the analysis of amplitude and phase of QDOs for the zonal average TOC fields, a QDO amplitude is about 6-7 Dobson Units (DU) in the high northern and southern latitudes, and it does not exceed 2-3 DU in the tropic regions. The latitudinal TOC variations are distinguished by a delay of the quasi-decennial oscillation phase in the southern latitudes in comparison with the northern latitudes. The TOC maxima phase coincides with the SA maxima phase in the tropic regions; the TOC variations go ahead of the SA variations, on average, in moderate and high latitudes of the Northern Hemisphere; the TOC variations are behind the SA variations in the Southern Hemisphere. The phase delay between TOC QDO maxima in the northern and southern latitudes appears to increase in the course of time, and the TOC quasi-decennial variations in the Arctic and Antarctic subpolar regions occur approximately in an antiphase over the last two decades.

  2. Assessment of POPs in air from Spain using passive sampling from 2008 to 2015. Part II: Spatial and temporal observations of PCDD/Fs and dl-PCBs.

    PubMed

    Muñoz-Arnanz, Juan; Roscales, Jose L; Vicente, Alba; Ros, María; Barrios, Laura; Morales, Laura; Abad, Esteban; Jiménez, Begoña

    2018-09-01

    Time series (2008-2015) of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) and dioxin-like polychlorinated biphenyls (dl-PCBs) in ambient air from the Spanish Monitoring Program were analyzed. A total of 321 samples were collected seasonally each year in 5 urban and 7 background sites by means of passive air sampling. Air concentrations were higher at urban than background sites (urban vs. background concentration ranges): PCDD/Fs (26.9-1010 vs. 20.0-357 fg/m 3 ), non-ortho PCBs (0.113-3.14 vs. 0.042-2.00 pg/m 3 ) and mono-ortho PCBs (0.644-41.3 vs. 0.500-32.8 pg/m 3 ). Results showed significant decreases from 2009 for non-ortho PCBs and PCDD/Fs as well as for WHO 2006 -TEQs. These declines were sharper, and sometimes only significant, in urban places resulting in converging levels at urban and background sites for these pollutants at the end of the study period. In contrast, mono-ortho PCBs did not show any significant variation but a steady flat temporal behavior in their concentrations, suggesting the existence of different sources between mono-ortho and non-ortho PCBs. Seasonality was observed for air burdens of all these POPs. PCDD/Fs were mostly measured at higher concentrations in colder than in hot seasons, and the opposite was true for dl-PCBs. Seasonal variations for PCDD/Fs appeared to be related to changes in their sources (e.g. domestic heating, open burning) rather than to temperature per se. In contrast, environmental temperature dependent factors (e.g. increased partitioning into the gas phase) drove seasonal variations in dl-PCBs instead of seasonal changes in their sources. Regarding spatial patterns, significant greater levels of PCDD/Fs and dl-PCBs were generally found in cities compared to background areas, pointing out the role of densely populated areas as sources for these pollutants in Spain. As proven by our results, long-term monitoring activities are essential to assess and understand temporal behaviors for these POPs, as well as to evaluate the achievement of Stockholm Convention objectives. Copyright © 2018 Elsevier B.V. All rights reserved.

  3. The response of middle atmospheric ozone to solar UV irradiance variations with a period of 27 days

    NASA Technical Reports Server (NTRS)

    Chen, LI; Brasseur, Guy; London, Julius

    1994-01-01

    A one-dimensional photochemical-dynamical-radiative time-dependent model was used to study the response of middle atmospheric temperature and ozone to solar UV irradiance variations with the period of 27 days. The model solar UV O(x), HO(x), NO(x), and CIO(x)families and modeled solar UV variations. The amplitude of the primary temperature response to the solar UV variation is plus 0.4 K at 85-90 km with a phase lag of about 6 days. A secondary maximum response of plus 0.3 K at 45-50 km appears with a phase lag of 1 day. There is a maximum positive ozone response to the 27-day solar UV oscillation of 2.5 percent at 80-90 km with a phase lag of about 10 days after the solar irradiance maximum. At 70 km the ozone response is about 1.2 percent and is out of phase with the solar variation. In the upper stratosphere (40-50 km) the relative ozone variation is small, about 0.2 percent to 0.3 percent, and there is a negative phase of about 4 days between the ozone and solar oscillations. These oscillations are in phase in the middle stratosphere (35-40 km) where there is again a maximum relative response of about 0.6 percent. The reasons for these ozone amplitude and phase variations are discussed.

  4. Self-energy functional theory with symmetry breaking for disordered lattice bosons

    NASA Astrophysics Data System (ADS)

    Hügel, Dario; Strand, Hugo U. R.; Pollet, Lode

    2018-07-01

    We extend the self-energy functional theory to the case of interacting lattice bosons in the presence of symmetry breaking and quenched disorder. The self-energy functional we derive depends only on the self-energies of the disorder-averaged propagators, allowing for the construction of general non-perturbative approximations. Using a simple single-site reference system with only three variational parameters, we are able to reproduce numerically exact quantum Monte Carlo (QMC) results on local observables of the Bose–Hubbard model with box disorder with high accuracy. At strong interactions, the phase boundaries are reproduced qualitatively but shifted with respect to the ones observed with QMC due to the extremely low condensate fraction in the superfluid phase. Deep in the strongly-disordered weakly-interacting regime, the simple reference system employed is insufficient and no stationary solutions can be found within its restricted variational subspace. By systematically analyzing thermodynamical observables and the spectral function, we find that the strongly interacting Bose glass is characterized by different regimes, depending on which local occupations are activated as a function of the disorder strength. We find that the particles delocalize into isolated superfluid lakes over a strongly localized background around maximally-occupied sites whenever these sites are particularly rare. Our results indicate that the transition from the Bose glass to the superfluid phase around unit filling at strong interactions is driven by the percolation of superfluid lakes which form around doubly occupied sites.

  5. The impact of photon flight path on S1 pulse shape analysis in liquid xenon two-phase detectors

    NASA Astrophysics Data System (ADS)

    Moongweluwan, M.

    2016-02-01

    The LUX dark matter search experiment is a 350 kg dual-phase xenon time projection chamber located at the 4850 ft level of the Sanford Underground Research Facility in Lead, SD. The success of two-phase xenon detectors for dark matter searches relies on their ability to distinguish electron recoil (ER) background events from nuclear recoil (NR) signal events. Typically, the NR-ER discrimination is obtained from the ratio of the electroluminescence light (S2) to the prompt scintillation light (S1). Analysis of the S1 pulse shape is an additional discrimination technique that can be used to distinguish NR from ER. Pulse-shape NR-ER discrimination can be achieved based on the ratio of the de-excitation processes from singlet and triplet states that generate the S1. The NR S1 is dominated by the de-excitation process from singlet states with a time constant of about 3 ns while the ER S1 is dominated by the de-excitation process from triplet states with a time constant of about 24 ns. As the size of the detectors increases, the variation in the S1 photon flight path can become comparable to these decay constants, reducing the utility of pulse-shape analysis to separate NR from ER. The effect of path length variations in the LUX detector has been studied using the results of simulations and the impact on the S1 pulse shape analysis is discussed.

  6. A positivity preserving and conservative variational scheme for phase-field modeling of two-phase flows

    NASA Astrophysics Data System (ADS)

    Joshi, Vaibhav; Jaiman, Rajeev K.

    2018-05-01

    We present a positivity preserving variational scheme for the phase-field modeling of incompressible two-phase flows with high density ratio. The variational finite element technique relies on the Allen-Cahn phase-field equation for capturing the phase interface on a fixed Eulerian mesh with mass conservative and energy-stable discretization. The mass conservation is achieved by enforcing a Lagrange multiplier which has both temporal and spatial dependence on the underlying solution of the phase-field equation. To make the scheme energy-stable in a variational sense, we discretize the spatial part of the Lagrange multiplier in the phase-field equation by the mid-point approximation. The proposed variational technique is designed to reduce the spurious and unphysical oscillations in the solution while maintaining the second-order accuracy of both spatial and temporal discretizations. We integrate the Allen-Cahn phase-field equation with the incompressible Navier-Stokes equations for modeling a broad range of two-phase flow and fluid-fluid interface problems. The coupling of the implicit discretizations corresponding to the phase-field and the incompressible flow equations is achieved via nonlinear partitioned iterative procedure. Comparison of results between the standard linear stabilized finite element method and the present variational formulation shows a remarkable reduction of oscillations in the solution while retaining the boundedness of the phase-indicator field. We perform a standalone test to verify the accuracy and stability of the Allen-Cahn two-phase solver. We examine the convergence and accuracy properties of the coupled phase-field solver through the standard benchmarks of the Laplace-Young law and a sloshing tank problem. Two- and three-dimensional dam break problems are simulated to assess the capability of the phase-field solver for complex air-water interfaces involving topological changes on unstructured meshes. Finally, we demonstrate the phase-field solver for a practical offshore engineering application of wave-structure interaction.

  7. Broadband manipulation of acoustic wavefronts by pentamode metasurface

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tian, Ye; Wei, Qi, E-mail: weiqi@nju.edu.cn; Cheng, Ying

    2015-11-30

    An acoustic metasurface with a sub-wavelength thickness can manipulate acoustic wavefronts freely by the introduction of abrupt phase variation. However, the existence of a narrow bandwidth and a low transmittance limits further applications. Here, we present a broadband and highly transparent acoustic metasurface based on a frequency-independent generalized acoustic Snell's law and pentamode metamaterials. The proposal employs a gradient velocity to redirect refracted waves and pentamode metamaterials to improve impedance matching between the metasurface and the background medium. Excellent wavefront manipulation based on the metasurface is further demonstrated by anomalous refraction, generation of non-diffracting Bessel beam, and sub-wavelength flat focusing.

  8. Permeability Sensitivity Functions and Rapid Simulation of Hydraulic-Testing Measurements Using Perturbation Theory

    NASA Astrophysics Data System (ADS)

    Escobar Gómez, J. D.; Torres-Verdín, C.

    2018-03-01

    Single-well pressure-diffusion simulators enable improved quantitative understanding of hydraulic-testing measurements in the presence of arbitrary spatial variations of rock properties. Simulators of this type implement robust numerical algorithms which are often computationally expensive, thereby making the solution of the forward modeling problem onerous and inefficient. We introduce a time-domain perturbation theory for anisotropic permeable media to efficiently and accurately approximate the transient pressure response of spatially complex aquifers. Although theoretically valid for any spatially dependent rock/fluid property, our single-phase flow study emphasizes arbitrary spatial variations of permeability and anisotropy, which constitute key objectives of hydraulic-testing operations. Contrary to time-honored techniques, the perturbation method invokes pressure-flow deconvolution to compute the background medium's permeability sensitivity function (PSF) with a single numerical simulation run. Subsequently, the first-order term of the perturbed solution is obtained by solving an integral equation that weighs the spatial variations of permeability with the spatial-dependent and time-dependent PSF. Finally, discrete convolution transforms the constant-flow approximation to arbitrary multirate conditions. Multidimensional numerical simulation studies for a wide range of single-well field conditions indicate that perturbed solutions can be computed in less than a few CPU seconds with relative errors in pressure of <5%, corresponding to perturbations in background permeability of up to two orders of magnitude. Our work confirms that the proposed joint perturbation-convolution (JPC) method is an efficient alternative to analytical and numerical solutions for accurate modeling of pressure-diffusion phenomena induced by Neumann or Dirichlet boundary conditions.

  9. Design of a comprehensive biochemistry and molecular biology experiment: phase variation caused by recombinational regulation of bacterial gene expression.

    PubMed

    Sheng, Xiumei; Xu, Shungao; Lu, Renyun; Isaac, Dadzie; Zhang, Xueyi; Zhang, Haifang; Wang, Huifang; Qiao, Zheng; Huang, Xinxiang

    2014-01-01

    Scientific experiments are indispensable parts of Biochemistry and Molecular Biology. In this study, a comprehensive Biochemistry and Molecular Biology experiment about Salmonella enterica serovar Typhi Flagellar phase variation has been designed. It consisted of three parts, namely, inducement of bacterial Flagellar phase variation, antibody agglutination test, and PCR analysis. Phase variation was observed by baterial motility assay and identified by antibody agglutination test and PCR analysis. This comprehensive experiment can be performed to help students improve their ability to use the knowledge acquired in Biochemistry and Molecular Biology. Copyright © 2014 by The International Union of Biochemistry and Molecular Biology.

  10. Testing the Interstellar Wind Helium Flow Direction with Galileo Euvs Data

    NASA Astrophysics Data System (ADS)

    Pryor, W. R.; Simmons, K. E.; Ajello, J. M.; Tobiska, W. K.; Retherford, K. D.; Stern, S. A.; Feldman, P. D.; Frisch, P. C.; Bzowski, M.; Grava, C.

    2014-12-01

    Forty years of measurements of the flow of interstellar helium through the heliosphere suggest that variations of the flow direction with time are possible. We will model Galileo Extreme Ultraviolet Spectrometer (EUVS) data to determine the best-fitting flow direction and compare it to values obtained by other spacecraft. The Galileo EUVS (Hord et al., 1992) was mounted on the spinning part of the spacecraft and obtained interstellar wind hydrogen Lyman-alpha 121.6 nm and helium 58.4 nm data on great circles passing near the ecliptic poles during the interplanetary cruise phase of the mission and also during the Jupiter orbital phase of the mission. The Galileo hydrogen cruise data have been previously published (Hord et al., 1991, Pryor et al., 1992; 1996; 2001), but the helium data have not. Our model was previously used by Ajello et al., 1978, 1979 to model Mariner 10 interstellar wind helium data, and by Stern et al., 2012 and Feldman et al., 2012 to model the interplanetary helium background near the moon in Lunar Reconnaissance Orbiter (LRO) Lyman-alpha Mapping Project (LAMP) data. The model has been updated to include recent determinations of daily helium 58.4 nm solar flux variations and helium losses due to EUV photoionization and electron impact ionization.

  11. Precise interpolar phasing of abrupt climate change during the last ice age

    USGS Publications Warehouse

    ,; Buizert, Christo; Adrian, Betty M.; Ahn, Jinho; Albert, Mary; Alley, Richard B.; Baggenstos, Daniel; Bauska, Thomas K.; Bay, Ryan C.; Bencivengo, Brian B.; Bentley, Charles R.; Brook, Edward J.; Chellman, Nathan J.; Clow, Gary D.; Cole-Dai, Jihong; Conway, Howard; Cravens, Eric; Cuffey, Kurt M.; Dunbar, Nelia W.; Edwards, Jon S.; Fegyveresi, John M.; Ferris, Dave G.; Fitzpatrick, Joan J.; Fudge, T. J.; Gibson, Chris J.; Gkinis, Vasileios; Goetz, Joshua J.; Gregory, Stephanie; Hargreaves, Geoffrey Mill; Iverson, Nels; Johnson, Jay A.; Jones, Tyler R.; Kalk, Michael L.; Kippenhan, Matthew J.; Koffman, Bess G.; Kreutz, Karl; Kuhl, Tanner W.; Lebar, Donald A.; Lee, James E.; Marcott, Shaun A.; Markle, Bradley R.; Maselli, Olivia J.; McConnell, Joseph R.; McGwire, Kenneth C.; Mitchell, Logan E.; Mortensen, Nicolai B.; Neff, Peter D.; Nishiizumi, Kunihiko; Nunn, Richard M.; Orsi, Anais J.; Pasteris, Daniel R.; Pedro, Joel B.; Pettit, Erin C.; Price, P. Buford; Priscu, John C.; Rhodes, Rachael H.; Rosen, Julia L.; Schauer, Andrew J.; Schoenemann, Spruce W.; Sendelbach, Paul J.; Severinghaus, Jeffrey P.; Shturmakov, Alexander J.; Sigl, Michael; Slawny, Kristina R.; Souney, Joseph M.; Sowers, Todd A.; Spencer, Matthew K.; Steig, Eric J.; Taylor, Kendrick C.; Twickler, Mark S.; Vaughn, Bruce H.; Voigt, Donald E.; Waddington, Edwin D.; Welten, Kees C.; Wendricks, Anthony W.; White, James W. C.; Winstrup, Mai; Wong, Gifford J.; Woodruff, Thomas E.

    2015-01-01

    The last glacial period exhibited abrupt Dansgaard–Oeschger climatic oscillations, evidence of which is preserved in a variety of Northern Hemisphere palaeoclimate archives1. Ice cores show that Antarctica cooled during the warm phases of the Greenland Dansgaard–Oeschger cycle and vice versa2, 3, suggesting an interhemispheric redistribution of heat through a mechanism called the bipolar seesaw4, 5, 6. Variations in the Atlantic meridional overturning circulation (AMOC) strength are thought to have been important, but much uncertainty remains regarding the dynamics and trigger of these abrupt events7, 8, 9. Key information is contained in the relative phasing of hemispheric climate variations, yet the large, poorly constrained difference between gas age and ice age and the relatively low resolution of methane records from Antarctic ice cores have so far precluded methane-based synchronization at the required sub-centennial precision2, 3,10. Here we use a recently drilled high-accumulation Antarctic ice core to show that, on average, abrupt Greenland warming leads the corresponding Antarctic cooling onset by 218 ± 92 years (2σ) for Dansgaard–Oeschger events, including the Bølling event; Greenland cooling leads the corresponding onset of Antarctic warming by 208 ± 96 years. Our results demonstrate a north-to-south directionality of the abrupt climatic signal, which is propagated to the Southern Hemisphere high latitudes by oceanic rather than atmospheric processes. The similar interpolar phasing of warming and cooling transitions suggests that the transfer time of the climatic signal is independent of the AMOC background state. Our findings confirm a central role for ocean circulation in the bipolar seesaw and provide clear criteria for assessing hypotheses and model simulations of Dansgaard–Oeschger dynamics.

  12. Current status of the Double Chooz experiment

    NASA Astrophysics Data System (ADS)

    Haser, J.; Double Chooz Collaboration

    2016-04-01

    The Double Chooz reactor antineutrino experiment aims for a precision measurement of the neutrino mixing angle θ13. Located at the Chooz nuclear power plant in France, it observes an energy dependent deficit in the electron antineutrino spectrum, currently with one detector filled with gadolinium-loaded liquid scintillator at a baseline of 1.05 km. The Double Chooz analysis utilizes different approaches to extract θ13: A combined rate and spectral shape fit as well as a background-model-independent analysis based on reactor power variations are performed, giving consistent results. Among the recent reactor-based oscillation experiments with comparable baseline it was the only one to observe reactor shutdown phases, during which all reactors are turned off. These enabled to measure the backgrounds solely, allowing to crosscheck the background models used in the oscillation analysis. At present an improved analysis was put forward with twice as much data statistics collected compared to the last publication. Revised selection criteria and background studies enhance the signal to background ratio while a decrease in the corresponding uncertainties is achieved. Along with an improved energy calibration the overall systematic uncertainty on θ13 is reduced, preparing for a two detector analysis. The new analysis obtains from 467.90 live days with 66.5 GW-ton-years of exposure (reactor power × detector mass × live time) a value of sin2 ⁡ 2θ13 =0.090-0.029+0.032(stat + syst).

  13. Pairing versus phase coherence of doped holes in distinct quantum spin backgrounds

    NASA Astrophysics Data System (ADS)

    Zhu, Zheng; Sheng, D. N.; Weng, Zheng-Yu

    2018-03-01

    We examine the pairing structure of holes injected into two distinct spin backgrounds: a short-range antiferromagnetic phase versus a symmetry protected topological phase. Based on density matrix renormalization group (DMRG) simulation, we find that although there is a strong binding between two holes in both phases, phase fluctuations can significantly influence the pair-pair correlation depending on the spin-spin correlation in the background. Here the phase fluctuation is identified as an intrinsic string operator nonlocally controlled by the spins. We show that while the pairing amplitude is generally large, the coherent Cooper pairing can be substantially weakened by the phase fluctuation in the symmetry-protected topological phase, in contrast to the short-range antiferromagnetic phase. It provides an example of a non-BCS mechanism for pairing, in which the paring phase coherence is determined by the underlying spin state self-consistently, bearing an interesting resemblance to the pseudogap physics in the cuprate.

  14. Quantitative evaluation of phase processing approaches in susceptibility weighted imaging

    NASA Astrophysics Data System (ADS)

    Li, Ningzhi; Wang, Wen-Tung; Sati, Pascal; Pham, Dzung L.; Butman, John A.

    2012-03-01

    Susceptibility weighted imaging (SWI) takes advantage of the local variation in susceptibility between different tissues to enable highly detailed visualization of the cerebral venous system and sensitive detection of intracranial hemorrhages. Thus, it has been increasingly used in magnetic resonance imaging studies of traumatic brain injury as well as other intracranial pathologies. In SWI, magnitude information is combined with phase information to enhance the susceptibility induced image contrast. Because of global susceptibility variations across the image, the rate of phase accumulation varies widely across the image resulting in phase wrapping artifacts that interfere with the local assessment of phase variation. Homodyne filtering is a common approach to eliminate this global phase variation. However, filter size requires careful selection in order to preserve image contrast and avoid errors resulting from residual phase wraps. An alternative approach is to apply phase unwrapping prior to high pass filtering. A suitable phase unwrapping algorithm guarantees no residual phase wraps but additional computational steps are required. In this work, we quantitatively evaluate these two phase processing approaches on both simulated and real data using different filters and cutoff frequencies. Our analysis leads to an improved understanding of the relationship between phase wraps, susceptibility effects, and acquisition parameters. Although homodyne filtering approaches are faster and more straightforward, phase unwrapping approaches perform more accurately in a wider variety of acquisition scenarios.

  15. Evaluating mitochondrial DNA variation in autism spectrum disorders

    PubMed Central

    HADJIXENOFONTOS, ATHENA; SCHMIDT, MICHAEL A.; WHITEHEAD, PATRICE L.; KONIDARI, IOANNA; HEDGES, DALE J.; WRIGHT, HARRY H.; ABRAMSON, RUTH K.; MENON, RAMKUMAR; WILLIAMS, SCOTT M.; CUCCARO, MICHAEL L.; HAINES, JONATHAN L.; GILBERT, JOHN R.; PERICAK-VANCE, MARGARET A.; MARTIN, EDEN R.; MCCAULEY, JACOB L.

    2012-01-01

    SUMMARY Despite the increasing speculation that oxidative stress and abnormal energy metabolism may play a role in Autism Spectrum Disorders (ASD), and the observation that patients with mitochondrial defects have symptoms consistent with ASD, there are no comprehensive published studies examining the role of mitochondrial variation in autism. Therefore, we have sought to comprehensively examine the role of mitochondrial DNA (mtDNA) variation with regard to ASD risk, employing a multi-phase approach. In phase 1 of our experiment, we examined 132 mtDNA single-nucleotide polymorphisms (SNPs) genotyped as part of our genome-wide association studies of ASD. In phase 2 we genotyped the major European mitochondrial haplogroup-defining variants within an expanded set of autism probands and controls. Finally in phase 3, we resequenced the entire mtDNA in a subset of our Caucasian samples (~400 proband-father pairs). In each phase we tested whether mitochondrial variation showed evidence of association to ASD. Despite a thorough interrogation of mtDNA variation, we found no evidence to suggest a major role for mtDNA variation in ASD susceptibility. Accordingly, while there may be attractive biological hints suggesting the role of mitochondria in ASD our data indicate that mtDNA variation is not a major contributing factor to the development of ASD. PMID:23130936

  16. Investigation of advanced phase-shifting projected fringe profilometry techniques

    NASA Astrophysics Data System (ADS)

    Liu, Hongyu

    1999-11-01

    The phase-shifting projected fringe profilometry (PSPFP) technique is a powerful tool in the profile measurements of rough engineering surfaces. Compared with other competing techniques, this technique is notable for its full-field measurement capacity, system simplicity, high measurement speed, and low environmental vulnerability. The main purpose of this dissertation is to tackle three important problems, which severely limit the capability and the accuracy of the PSPFP technique, with some new approaches. Chapter 1 provides some background information of the PSPFP technique including the measurement principles, basic features, and related techniques is briefly introduced. The objectives and organization of the thesis are also outlined. Chapter 2 gives a theoretical treatment to the absolute PSPFP measurement. The mathematical formulations and basic requirements of the absolute PSPFP measurement and its supporting techniques are discussed in detail. Chapter 3 introduces the experimental verification of the proposed absolute PSPFP technique. Some design details of a prototype system are discussed as supplements to the previous theoretical analysis. Various fundamental experiments performed for concept verification and accuracy evaluation are introduced together with some brief comments. Chapter 4 presents the theoretical study of speckle- induced phase measurement errors. In this analysis, the expression for speckle-induced phase errors is first derived based on the multiplicative noise model of image- plane speckles. The statistics and the system dependence of speckle-induced phase errors are then thoroughly studied through numerical simulations and analytical derivations. Based on the analysis, some suggestions on the system design are given to improve measurement accuracy. Chapter 5 discusses a new technique combating surface reflectivity variations. The formula used for error compensation is first derived based on a simplified model of the detection process. The techniques coping with two major effects of surface reflectivity variations are then introduced. Some fundamental problems in the proposed technique are studied through simulations. Chapter 6 briefly summarizes the major contributions of the current work and provides some suggestions for the future research.

  17. Interdecadal change in the Eurasia-Pacific anti-phase relation of atmospheric mass and its possible link with PDO

    NASA Astrophysics Data System (ADS)

    Zhang, Qian; Guan, Zhaoyong

    2017-02-01

    Based on the known climatic shift that occurred in 1976, we divide the present study period into two epochs: epoch-I, for 1958-1976; and epoch-II, for 1977-2002. Using ERA-40 and the 20th century reanalysis data, we investigate the interdecadal change in the Eurasia-Pacific anti-phase relation (EPAR) pattern of atmospheric mass (AM) during boreal winter before and after 1976. It is found that anomalous AM over lands is highly and negatively correlated with anomalous AM over oceans in the Northern Hemisphere during the winter season. This correlation does not change much from epoch-I to epoch-II. However, the correlation pattern of surface air pressure anomalies with variations of anomalous AM over lands changes remarkably from epoch-I to epoch-II; the EPAR pattern emerges evidently in the later period, whereas it is not significant in epoch-I. The occurrence of the EPAR pattern in epoch-II may be attributable to the Pacific Decadal Oscillation (PDO). The PDO may modulate the EPAR pattern in two ways. Firstly, the interdecadal component of the PDO as a background may modulate the intensities of the Aleutian low, East Asian trough, and westerly flow, acting as a waveguide during the warm phase (epoch-II) of the PDO. Secondly, the interannual variations of sea surface temperature anomalies in the North Pacific, in association with the PDO, may affect the interannual variations of AM, which facilitates the existence of the EPAR pattern in epoch-II only. With the teleconnection pattern having changed before and after 1976, winter climate anomalies, including rainfall and temperature, are found to be different in many regions in the Northern Hemisphere between epoch-I and epoch-II. All the results of the present work are meaningful for a better understanding of climate anomalies during boreal winter.

  18. Quantitative assessment of groundwater quality using a biological indicator: some preliminary observations.

    PubMed

    Pfeil, R M; Venkat, J A; Plimmer, J R; Sham, S; Davis, K; Nair, P P

    1994-02-01

    The genotoxicity of groundwater was evaluated, using a novel application of the SOS microplate assay (SOSMA). Organic residues were extracted from groundwater samples from Maryland, Pennsylvania, and Delaware by using C-18 bonded silica solid phase extraction tubes. Total organic carbon content (TOC) of water samples was also determined. The genotoxicity of the extracts was determined by the SOSMA. Relative activity (RA) as determined by the SOSMA is a quantitative measure of genotoxicity based on a comparison to the activity of the mutagen, 4-nitroquinoline oxide. Low levels of RA (about 2x background) were detected in waters from sites within these states. There was considerable temporal and spatial variation in the observed RA, but no definite patterns were observed in the variation. Between sampling sites there was a positive correlation between RA and TOC; however, this relationship appeared to be reversed occasionally within a sampling site. The extraction and bioassay methods provide an easy and relatively inexpensive means of determining water quality.

  19. A Madden-Julian Oscillation in Tropospheric Ozone

    NASA Technical Reports Server (NTRS)

    Ziemke, J. R.; Chandra, S.

    2004-01-01

    This is the first study to indicate a Madden-Julian Oscillation (MJO) in tropospheric ozone. Tropospheric ozone is derived using differential measurements of total column ozone and stratospheric column ozone measured from total ozone mapping spectrometer (TOMS) and microwave limb sounder (MLS) instruments. Two broad regions of significant MJO signal are identified in the tropics, one in the western Pacific and the other in the eastern Pacific. Over both regions, MJO variations in tropospheric ozone represent 5- 10 DU peak-to-peak anomalies. These variations are significant compared to mean background amounts of 20 DU or less over most of the tropical Pacific. The implications of these results are: (1) model values of TCO in the tropical Pacific region, when accounted for the MJO may be highly variable depending upon the phase of the MJO, and (2) MJO signals of this magnitude would need to be considered when investigating and interpreting particular pollution events since ozone is a precursor of the hydroxyl (OH) radical, the main oxidizing agent of pollutants in the lower atmosphere.

  20. Background levels of methane in Mars’ atmosphere show strong seasonal variations

    NASA Astrophysics Data System (ADS)

    Webster, Christopher R.; Mahaffy, Paul R.; Atreya, Sushil K.; Moores, John E.; Flesch, Gregory J.; Malespin, Charles; McKay, Christopher P.; Martinez, German; Smith, Christina L.; Martin-Torres, Javier; Gomez-Elvira, Javier; Zorzano, Maria-Paz; Wong, Michael H.; Trainer, Melissa G.; Steele, Andrew; Archer, Doug; Sutter, Brad; Coll, Patrice J.; Freissinet, Caroline; Meslin, Pierre-Yves; Gough, Raina V.; House, Christopher H.; Pavlov, Alexander; Eigenbrode, Jennifer L.; Glavin, Daniel P.; Pearson, John C.; Keymeulen, Didier; Christensen, Lance E.; Schwenzer, Susanne P.; Navarro-Gonzalez, Rafael; Pla-García, Jorge; Rafkin, Scot C. R.; Vicente-Retortillo, Álvaro; Kahanpää, Henrik; Viudez-Moreiras, Daniel; Smith, Michael D.; Harri, Ari-Matti; Genzer, Maria; Hassler, Donald M.; Lemmon, Mark; Crisp, Joy; Sander, Stanley P.; Zurek, Richard W.; Vasavada, Ashwin R.

    2018-06-01

    Variable levels of methane in the martian atmosphere have eluded explanation partly because the measurements are not repeatable in time or location. We report in situ measurements at Gale crater made over a 5-year period by the Tunable Laser Spectrometer on the Curiosity rover. The background levels of methane have a mean value 0.41 ± 0.16 parts per billion by volume (ppbv) (95% confidence interval) and exhibit a strong, repeatable seasonal variation (0.24 to 0.65 ppbv). This variation is greater than that predicted from either ultraviolet degradation of impact-delivered organics on the surface or from the annual surface pressure cycle. The large seasonal variation in the background and occurrences of higher temporary spikes (~7 ppbv) are consistent with small localized sources of methane released from martian surface or subsurface reservoirs.

  1. Interdecadal changes in El Nino onset in the last four decades

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, B.

    The characteristics of the onset of the Pacific basin-wide warming have experienced notable changes since the late 1970s. The changes are caused by a concurrent change in the background state on which El Nino evolves. For the most significant warm episodes before the late 1970s (1957, 1965, and 1972), the atmospheric anomalies in the onset phase (November to December of the year preceding the El Nino) were characterized by a giant anomalous cyclone over east Australia whose eastward movement brought anomalous westerlies into the western equatorial Pacific, causing development of the basin-wide warming. Meanwhile, the trades in the southeastern Pacificmore » relaxed back to their weakest stage, resulting in a South American coastal warming, which led the central Pacific warming about three seasons. Conversely, in the warm episodes after the late 1970s (1982, 1986-87, and 1991), the onset phase was characterized by an anomalous cyclone over the Philippine Sea whose intensification established anomalous westerlies in the western equatorial Pacific. Concurrently, the trades were enhanced in the southeastern Pacific, so that the coastal warming off Ecuado occurred after the central Pacific warming. It is found that the atmospheric anomalies occurring in the onset phase are controlled by background SSTs that exhibit a significant secular variation. In the late 1970s, the tropical Pacific between 20{degrees}S and 20{degrees}N experienced an abrupt interdecadal warming, concurrent with a cooling in the extratropical North Pacific and South Pacific and a deepening of the Aleutian Low. The interdecadal change of the background state affected El Nino onset by altering the formation of the onset cyclone and equatorial westerly anomalies and through changing the trades in the southeast Pacific, which determine whether a South American coastal warming leads or follows the warming at the central equatorial Pacific. 49 refs., 13 figs.« less

  2. Approximate Genealogies Under Genetic Hitchhiking

    PubMed Central

    Pfaffelhuber, P.; Haubold, B.; Wakolbinger, A.

    2006-01-01

    The rapid fixation of an advantageous allele leads to a reduction in linked neutral variation around the target of selection. The genealogy at a neutral locus in such a selective sweep can be simulated by first generating a random path of the advantageous allele's frequency and then a structured coalescent in this background. Usually the frequency path is approximated by a logistic growth curve. We discuss an alternative method that approximates the genealogy by a random binary splitting tree, a so-called Yule tree that does not require first constructing a frequency path. Compared to the coalescent in a logistic background, this method gives a slightly better approximation for identity by descent during the selective phase and a much better approximation for the number of lineages that stem from the founder of the selective sweep. In applications such as the approximation of the distribution of Tajima's D, the two approximation methods perform equally well. For relevant parameter ranges, the Yule approximation is faster. PMID:17182733

  3. Washout of hepatocellular carcinoma on portal venous phase of multidetector computed tomography in a pre-transplant population.

    PubMed

    Kitzing, Yu Xuan; Ng, Bernard H K; Kitzing, Bjoern; Waugh, Richard; Kench, James G; Strasser, Simone I; McCormack, Samuel

    2015-12-01

    Washout is an important diagnostic imaging feature of hepatocellular carcinoma (HCC) on computed tomography (CT). The primary aim of this study is to evaluate the prevalence and the interobserver variation in the detection of portal venous phase (PVP) washout of HCCs using CT in a transplant population. The secondary aim is to evaluate factors influencing the detection of PVP washout. Forty-five patients who underwent CT liver imaging within the 60 days before transplantation had viable HCCs confirmed on pathology. Two radiologists retrospectively reviewed the images for HCCs including features of arterial enhancement and PVP washout. Clinical data, peak kilovoltage, imaging features of portal hypertension, region of interest attenuation measurements of the individual lesions, background liver parenchyma and portal vein were obtained. Liver to lesion attenuation ratio was also calculated. Statistical analysis was performed. The two readers identified 50 arterially enhancing HCCs in 45 patients. In consensus, the two readers identified washout in 60% of the HCCs with a substantial interobserver agreement (kappa = 0.633). PVP washout was associated with larger lesion size, increased background liver parenchyma attenuation, increased liver to lesion attenuation ratio, increased portal vein attenuation and hepatitis B viral status (P = 0.027, 0.008, 0.014, 0.017 and 0.037 respectively). In our transplant population, portal venous phase washout was seen in 60% of the hypervascular HCCs. Factors influencing the presence of PVP washout include lesion size as well as the liver and portal vein attenuation reflective of the portal haemodynamics. © 2015 The Royal Australian and New Zealand College of Radiologists.

  4. Temperature Responses to Spectral Solar Variability on Decadal Time Scales

    NASA Technical Reports Server (NTRS)

    Cahalan, Robert F.; Wen, Guoyong; Harder, Jerald W.; Pilewskie, Peter

    2010-01-01

    Two scenarios of spectral solar forcing, namely Spectral Irradiance Monitor (SIM)-based out-of-phase variations and conventional in-phase variations, are input to a time-dependent radiative-convective model (RCM), and to the GISS modelE. Both scenarios and models give maximum temperature responses in the upper stratosphere, decreasing to the surface. Upper stratospheric peak-to-peak responses to out-of-phase forcing are approx.0.6 K and approx.0.9 K in RCM and modelE, approx.5 times larger than responses to in-phase forcing. Stratospheric responses are in-phase with TSI and UV variations, and resemble HALOE observed 11-year temperature variations. For in-phase forcing, ocean mixed layer response lags surface air response by approx.2 years, and is approx.0.06 K compared to approx.0.14 K for atmosphere. For out-of-phase forcing, lags are similar, but surface responses are significantly smaller. For both scenarios, modelE surface responses are less than 0.1 K in the tropics, and display similar patterns over oceanic regions, but complex responses over land.

  5. Phase diagram of an extended Agassi model

    NASA Astrophysics Data System (ADS)

    García-Ramos, J. E.; Dukelsky, J.; Pérez-Fernández, P.; Arias, J. M.

    2018-05-01

    Background: The Agassi model [D. Agassi, Nucl. Phys. A 116, 49 (1968), 10.1016/0375-9474(68)90482-X] is an extension of the Lipkin-Meshkov-Glick (LMG) model [H. J. Lipkin, N. Meshkov, and A. J. Glick, Nucl. Phys. 62, 188 (1965), 10.1016/0029-5582(65)90862-X] that incorporates the pairing interaction. It is a schematic model that describes the interplay between particle-hole and pair correlations. It was proposed in the 1960s by D. Agassi as a model to simulate the properties of the quadrupole plus pairing model. Purpose: The aim of this work is to extend a previous study by Davis and Heiss [J. Phys. G: Nucl. Phys. 12, 805 (1986), 10.1088/0305-4616/12/9/006] generalizing the Agassi model and analyze in detail the phase diagram of the model as well as the different regions with coexistence of several phases. Method: We solve the model Hamiltonian through the Hartree-Fock-Bogoliubov (HFB) approximation, introducing two variational parameters that play the role of order parameters. We also compare the HFB calculations with the exact ones. Results: We obtain the phase diagram of the model and classify the order of the different quantum phase transitions appearing in the diagram. The phase diagram presents broad regions where several phases, up to three, coexist. Moreover, there is also a line and a point where four and five phases are degenerated, respectively. Conclusions: The phase diagram of the extended Agassi model presents a rich variety of phases. Phase coexistence is present in extended areas of the parameter space. The model could be an important tool for benchmarking novel many-body approximations.

  6. First results of GERDA Phase II and consistency with background models

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Allardt, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Belyaev, S. T.; Benato, G.; Bettini, A.; Bezrukov, L.; Bode1, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; Di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Frodyma, N.; Gangapshev, A.; Garfagnini, A.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Janicskó Csáthy, J.; Jochum, J.; Junker, M.; Kazalov, V.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Lehnert, B.; Liao, H. Y.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Medinaceli, E.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Palioselitis, D.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Salathe, M.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schulz, O.; Schütz, A.-K.; Schwingenheuer, B.; Selivanenko, O.; Shevzik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zuber, K.; Zuzel, G.

    2017-01-01

    The GERDA (GERmanium Detector Array) is an experiment for the search of neutrinoless double beta decay (0νββ) in 76Ge, located at Laboratori Nazionali del Gran Sasso of INFN (Italy). GERDA operates bare high purity germanium detectors submersed in liquid Argon (LAr). Phase II of data-taking started in Dec 2015 and is currently ongoing. In Phase II 35 kg of germanium detectors enriched in 76Ge including thirty newly produced Broad Energy Germanium (BEGe) detectors is operating to reach an exposure of 100 kg·yr within about 3 years data taking. The design goal of Phase II is to reduce the background by one order of magnitude to get the sensitivity for T1/20ν = O≤ft( {{{10}26}} \\right){{ yr}}. To achieve the necessary background reduction, the setup was complemented with LAr veto. Analysis of the background spectrum of Phase II demonstrates consistency with the background models. Furthermore 226Ra and 232Th contamination levels consistent with screening results. In the first Phase II data release we found no hint for a 0νββ decay signal and place a limit of this process T1/20ν > 5.3 \\cdot {1025} yr (90% C.L., sensitivity 4.0·1025 yr). First results of GERDA Phase II will be presented.

  7. Temperature and ice layer trends in the summer middle atmosphere

    NASA Astrophysics Data System (ADS)

    Lübken, F.-J.; Berger, U.

    2012-04-01

    We present results from our LIMA model (Leibniz Institute Middle Atmosphere Model) which nicely reproduces mean conditions of the summer mesopause region and also mean characteristics of ice layers known as noctilucent clouds. LIMA nudges to ECMWF data in the troposphere and lower stratosphere which influences the background conditions in the mesosphere. We study temperature trends in the mesosphere at middle and polar latitudes and compared with temperature trends from satellites, lidar, and phase height observations. For the first time large observed temperature trends in the summer mesosphere can be reproduced and explained by a model. As will be shown, stratospheric ozone has a major impact on temperature trends in the summer mesosphere. The temperature trend is not uniform in time: it is moderate from 1961 (the beginning of our record) until the beginning of the 1980s. Thereafter, temperatures decrease much stronger until the mid 1990s. Thereafter, temperatures are nearly constant or even increase with time. As will be shown, trends in ozone and carbon dioxide explain most of this behavior. Ice layers in the summer mesosphere are very sensitive to background conditions and are therefore considered to be appropriate tracers for long term variations in the middle atmosphere. We use LIMA background conditions to determine ice layer characteristics in the mesopause region. We compare our results with measurements, for example with albedos from the SBUV satellites, and show that we can nicely reproduce observed trends. It turns out that temperature trends are positive (negative) in the upper (lower) part of the ice layer regime. This complicates an interpretation of NLC long term variations in terms of temperature trends.

  8. Simple Sequence Repeats Provide a Substrate for Phenotypic Variation in the Neurospora crassa Circadian Clock

    PubMed Central

    Michael, Todd P.; Park, Sohyun; Kim, Tae-Sung; Booth, Jim; Byer, Amanda; Sun, Qi; Chory, Joanne; Lee, Kwangwon

    2007-01-01

    Background WHITE COLLAR-1 (WC-1) mediates interactions between the circadian clock and the environment by acting as both a core clock component and as a blue light photoreceptor in Neurospora crassa. Loss of the amino-terminal polyglutamine (NpolyQ) domain in WC-1 results in an arrhythmic circadian clock; this data is consistent with this simple sequence repeat (SSR) being essential for clock function. Methodology/Principal Findings Since SSRs are often polymorphic in length across natural populations, we reasoned that investigating natural variation of the WC-1 NpolyQ may provide insight into its role in the circadian clock. We observed significant phenotypic variation in the period, phase and temperature compensation of circadian regulated asexual conidiation across 143 N. crassa accessions. In addition to the NpolyQ, we identified two other simple sequence repeats in WC-1. The sizes of all three WC-1 SSRs correlated with polymorphisms in other clock genes, latitude and circadian period length. Furthermore, in a cross between two N. crassa accessions, the WC-1 NpolyQ co-segregated with period length. Conclusions/Significance Natural variation of the WC-1 NpolyQ suggests a mechanism by which period length can be varied and selected for by the local environment that does not deleteriously affect WC-1 activity. Understanding natural variation in the N. crassa circadian clock will facilitate an understanding of how fungi exploit their environments. PMID:17726525

  9. Optimized phase gradient measurements and phase-amplitude interplay in optical coherence elastography

    NASA Astrophysics Data System (ADS)

    Zaitsev, Vladimir Y.; Matveyev, Alexander L.; Matveev, Lev A.; Gelikonov, Grigory V.; Sovetsky, Aleksandr A.; Vitkin, Alex

    2016-11-01

    In compressional optical coherence elastography, phase-variation gradients are used for estimating quasistatic strains created in tissue. Using reference and deformed optical coherence tomography (OCT) scans, one typically compares phases from pixels with the same coordinates in both scans. Usually, this limits the allowable strains to fairly small values < to 10-3, with the caveat that such weak phase gradients may become corrupted by stronger measurement noises. Here, we extend the OCT phase-resolved elastographic methodology by (1) showing that an order of magnitude greater strains can significantly increase the accuracy of derived phase-gradient differences, while also avoiding error-phone phase-unwrapping procedures and minimizing the influence of decorrelation noise caused by suprapixel displacements, (2) discussing the appearance of artifactual stiff inclusions in resultant OCT elastograms in the vicinity of bright scatterers due to the amplitude-phase interplay in phase-variation measurements, and (3) deriving/evaluating methods of phase-gradient estimation that can outperform conventionally used least-square gradient fitting. We present analytical arguments, numerical simulations, and experimental examples to demonstrate the advantages of the proposed optimized phase-variation methodology.

  10. Time-correlated coincidences at the sudbury neutrino observatory: An antineutrino search

    NASA Astrophysics Data System (ADS)

    Shokair, Timothy Milad

    This dissertation presents a search for antineutrinos in all three phases of data from the Sudbury Neutrino Observatory. This work presents a new method for detecting time correlated coincidences in water detectors. There are two separate searches: an outside search for the inverse beta decay of antineutrinos on protons and an inside search for the inverse beta decay of antineutrinos on deuterons. The inside search found 3 antineutrino candidates in Phase I with an expected background of 3.83+0.71-0.72 events, 28 antineutrino candidates in Phase II with an expected background of 21.25+3.72-3.75 events, 4 antineutrino candidates in Phase III with an expected background of 6.06 +/- 1.14 events. The outside search found 4 antineutrino candidates in Phase I with an expected background of 1.21+0.14-0.17 events, 8 antineutrino candidates in Phase II with an expected background of 9.77+1.06-1.34 events, 0 antineutrino candidates in Phase III with an expected background of 0.46 +/- 0.29 events. Including the expected contribution of antineutrinos from nuclear reactors after oscillations, a limit on the solar antineutrino flux is computed to be F8Bn¯ ≤ 2.5 x 103 cm-2s -1. Taking the flux limit and the measured 8B solar neutrino flux, a limit on the neutrino to antineutrino conversion probability of P(nu → nu) ≤ 5.0 x 10-4. These limits are the best limits from a water detector.

  11. Long-term variations in the gamma-ray background on SMM

    NASA Technical Reports Server (NTRS)

    Kurfess, J. D.; Share, G. H.; Kinzer, R. L.; Johnson, W. N.; Adams, J. H., Jr.

    1989-01-01

    Long-term temporal variations in the various components of the background radiation detected by the gamma-ray spectrometer on the Solar Maximum Mission are presented. The SMM gamma-ray spectrometer was launched in February, 1980 and continues to operate normally. The extended period of mission operations has provided a large data base in which it is possible to investigate a variety of environmental and instrumental background effects. In particular, several effects associated with orbital precession are introduced and discussed.

  12. The role of ensemble-based statistics in variational assimilation of cloud-affected observations from infrared imagers

    NASA Astrophysics Data System (ADS)

    Hacker, Joshua; Vandenberghe, Francois; Jung, Byoung-Jo; Snyder, Chris

    2017-04-01

    Effective assimilation of cloud-affected radiance observations from space-borne imagers, with the aim of improving cloud analysis and forecasting, has proven to be difficult. Large observation biases, nonlinear observation operators, and non-Gaussian innovation statistics present many challenges. Ensemble-variational data assimilation (EnVar) systems offer the benefits of flow-dependent background error statistics from an ensemble, and the ability of variational minimization to handle nonlinearity. The specific benefits of ensemble statistics, relative to static background errors more commonly used in variational systems, have not been quantified for the problem of assimilating cloudy radiances. A simple experiment framework is constructed with a regional NWP model and operational variational data assimilation system, to provide the basis understanding the importance of ensemble statistics in cloudy radiance assimilation. Restricting the observations to those corresponding to clouds in the background forecast leads to innovations that are more Gaussian. The number of large innovations is reduced compared to the more general case of all observations, but not eliminated. The Huber norm is investigated to handle the fat tails of the distributions, and allow more observations to be assimilated without the need for strict background checks that eliminate them. Comparing assimilation using only ensemble background error statistics with assimilation using only static background error statistics elucidates the importance of the ensemble statistics. Although the cost functions in both experiments converge to similar values after sufficient outer-loop iterations, the resulting cloud water, ice, and snow content are greater in the ensemble-based analysis. The subsequent forecasts from the ensemble-based analysis also retain more condensed water species, indicating that the local environment is more supportive of clouds. In this presentation we provide details that explain the apparent benefit from using ensembles for cloudy radiance assimilation in an EnVar context.

  13. Impact of respiratory-correlated CT sorting algorithms on the choice of margin definition for free-breathing lung radiotherapy treatments.

    PubMed

    Thengumpallil, Sheeba; Germond, Jean-François; Bourhis, Jean; Bochud, François; Moeckli, Raphaël

    2016-06-01

    To investigate the impact of Toshiba phase- and amplitude-sorting algorithms on the margin strategies for free-breathing lung radiotherapy treatments in the presence of breathing variations. 4D CT of a sphere inside a dynamic thorax phantom was acquired. The 4D CT was reconstructed according to the phase- and amplitude-sorting algorithms. The phantom was moved by reproducing amplitude, frequency, and a mix of amplitude and frequency variations. Artefact analysis was performed for Mid-Ventilation and ITV-based strategies on the images reconstructed by phase- and amplitude-sorting algorithms. The target volume deviation was assessed by comparing the target volume acquired during irregular motion to the volume acquired during regular motion. The amplitude-sorting algorithm shows reduced artefacts for only amplitude variations while the phase-sorting algorithm for only frequency variations. For amplitude and frequency variations, both algorithms perform similarly. Most of the artefacts are blurring and incomplete structures. We found larger artefacts and volume differences for the Mid-Ventilation with respect to the ITV strategy, resulting in a higher relative difference of the surface distortion value which ranges between maximum 14.6% and minimum 4.1%. The amplitude- is superior to the phase-sorting algorithm in the reduction of motion artefacts for amplitude variations while phase-sorting for frequency variations. A proper choice of 4D CT sorting algorithm is important in order to reduce motion artefacts, especially if Mid-Ventilation strategy is used. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  14. Detecting atmospheric normal modes with periods less than 6 h by barometric observations

    NASA Astrophysics Data System (ADS)

    Ermolenko, S. I.; Shved, G. M.; Jacobi, Ch.

    2018-04-01

    The theory of atmospheric normal modes (ANMs) predicts the existence of relatively short-period gravity-inertia ANMs. Simultaneous observations of surface air-pressure variations by barometers at distant stations of the Global Geodynamics Project network during an interval of 6 months were used to detect individual gravity-inertia ANMs with periods of ∼2-5 h. Evidence was found for five ANMs with a lifetime of ∼10 days. The data of the stations, which are close in both latitude and longitude, were utilized for deriving the phases of the detected ANMs. The phases revealed wave propagation to the west and increase of zonal wavenumbers with frequency. As all the detected gravity-inertia ANMs are westward propagating, they are suggested to be generated due to the breakdown of migrating solar tides and/or large-scale Rossby waves. The existence of an ANM background will complicate the detection of the translational motions of the Earth's inner core.

  15. Charge modeling of ionic polymer-metal composites for dynamic curvature sensing

    NASA Astrophysics Data System (ADS)

    Bahramzadeh, Yousef; Shahinpoor, Mohsen

    2011-04-01

    A curvature sensor based on Ionic Polymer-Metal Composite (IPMC) is proposed and characterized for sensing of curvature variation in structures such as inflatable space structures in which using low power and flexible curvature sensor is of high importance for dynamic monitoring of shape at desired points. The linearity of output signal of sensor for calibration, effect of deflection rate at low frequencies and the phase delay between the output signal and the input deformation of IPMC curvature sensor is investigated. An analytical chemo-electro-mechanical model for charge dynamic of IPMC sensor is presented based on Nernst-Planck partial differential equation which can be used to explain the phenomena observed in experiments. The rate dependency of output signal and phase delay between the applied deformation and sensor signal is studied using the proposed model. The model provides a background for predicting the general characteristics of IPMC sensor. It is shown that IPMC sensor exhibits good linearity, sensitivity, and repeatability for dynamic curvature sensing of inflatable structures.

  16. Seasonal features of the quasi-biennial variations of the NO2 stratospheric content derived from results of ground-based measurements

    NASA Astrophysics Data System (ADS)

    Aheyeva, Viktoryia; Gruzdev, Aleksandr N.

    2016-04-01

    According to the results of ground-based spectrometric measurements of the stratospheric column NO2 contents (SC NO2) within the Network for the Detection of Atmospheric Composition Change (NDACC), satellite measurements of total ozone (TO) and ERA-Interim reanalysis data of temperature, seasonal and latitudinal distributions of the amplitudes of the quasi-biennial variations of these quantities are obtained. The dependence of the diurnal cycle in the SC NO2 on the phase of quasi-biennial oscillation in the equatorial stratospheric wind (QBO) is revealed. The QBO effects in the SC NO2, TO, and stratospheric temperature in the northern (NH) and southern (SH) hemispheres are most significant during the winter-spring periods. Furthermore they exhibit an essential inter-hemispheric asymmetry. The SC NO2 in the Antarctic for the west QBO phase is less than that for the east phase, and the quasi-biennial variations of the SC NO2 in the SH middle latitudes are opposite to the variations in the Antarctic. In the NH, the winter values of the SC NO2 are generally less during the west QBO phase than during the east phase, whereas in spring, on the contrary, the NO2 values for the west QBO phase exceed those for the east phase. Along with SC NO2, the features of the quasi-biennial variations of TO and stratospheric temperature are discussed. Possible mechanisms of the quasi-biennial variations of the analyzed parameters are considered for the different latitudinal zones.

  17. Seasonal features of quasi-biennial variations of NO2 stratospheric content derived from ground-based measurements

    NASA Astrophysics Data System (ADS)

    Ageyeva, V. Yu.; Gruzdev, A. N.

    2017-01-01

    Seasonal and latitudinal distributions of amplitudes of quasi-biennial variations in total NO2 content (NO2 TC), total ozone content (TOC), and stratospheric temperature are obtained. NO2 TC data from ground-based spectrometric measurements within the Network for the Detection of Atmospheric Composition Change (NDACC), TOC data from satellite measurements, and stratospheric temperature data from ERA-Interim reanalysis are used for the analysis. The differences in the NO2 TC diurnal cycles are identified between the westerly and easterly phases of the quasi-biennial oscillations (QBO) of equatorial stratospheric wind. The QBO effects in the NO2 TC, TOC, and stratospheric temperature in the Northern (NH) and Southern (SH) hemispheres are most significant in the winter-spring periods, with essential differences between the NH and SH. The NO2 TC in the Antarctic is less for the westerly phase of the QBO than that for the easterly phase, and the NO2 TC quasi-biennial variations in the SH mid-latitudes are opposite of the variations in the Antarctic. In the NH, the winter values of the NO2 TC are generally less during the westerly QBO phase than during the easterly phase, whereas in spring, on the contrary, the values for the westerly QBO phase exceed those for the easterly phase. Along with NO2, the features of the quasi-biennial variations of TOC and stratospheric temperature are discussed. Possible mechanisms of the quasi-biennial variations of the analyzed parameters are considered for the different latitudinal zones.

  18. Estimating Genetic and Maternal Effects Determining Variation in Immune Function of a Mixed-Mating Snail

    PubMed Central

    Seppälä, Otto; Langeloh, Laura

    2016-01-01

    Evolution of host defenses such as immune function requires heritable genetic variation in them. However, also non-genetic maternal effects can contribute to phenotypic variation, thus being an alternative target for natural selection. We investigated the role of individuals’ genetic background and maternal effects in determining immune defense traits (phenoloxidase and antibacterial activity of hemolymph), as well as in survival and growth, in the simultaneously hermaphroditic snail Lymnaea stagnalis. We utilized the mixed mating system of this species by producing full-sib families in which each parental snail had produced offspring as both a dam and as a sire, and tested whether genetic background (family) and non-genetic maternal effects (dam nested within family) explain trait variation. Immune defense traits and growth were affected solely by individuals’ genetic background. Survival of snails did not show family-level variation. Additionally, some snails were produced through self-fertilization. They showed reduced growth and survival suggesting recessive load or overdominance. Immune defense traits did not respond to inbreeding. Our results suggest that the variation in snail immune function and growth was due to genetic differences. Since immune traits did not respond to inbreeding, this variation is most likely due to additive or epistatic genetic variance. PMID:27551822

  19. A mechanism of midlatitude noontime foE long-term variations inferred from European observations

    NASA Astrophysics Data System (ADS)

    Mikhailov, A. V.; Perrone, L.; Nusinov, A. A.

    2017-04-01

    Manually scaled June noontime monthly median foE values at three European stations Rome, Juliusruh, and Slough/Chilton were used to understand the mechanism of foE long-term variations. The 11 year running mean smoothed foE manifests long-term (for some solar cycles) variations with the rising phase at the end of 1960-1985 and the falling phase after 1985. A close relationship (even in details) between (foEave)11y and (R12)11y variations with the correlation coefficient of 0.996 (absolutely significant according to Fisher F criterion) suggests that the Sun is the source of these (foEave)11y long-term variations. After removing solar activity long-term variations the residual (foEave)11y trend is very small ( 0.029% per decade) being absolutely insignificant. This means that all (foEave)11y variations are removed with one solar activity index, (R12)11y, i.e., this means that long-term variations are fully controlled by solar activity. Theory of midlatitude daytime E region tells us that long-term variations of solar EUV in two lines λ = 977 Å (CIII) and λ = 1025.7 Å (HLyβ) and X-ray radiation with λ < 100 Å (both manifesting the same long-term variations with the rising phase at the end of 1960-1985 and the falling phase after 1985) are responsible for the observed (foEave)11y variations. Therefore, the observed daytime midlatitude foE long-term variations have a natural (not anthropogenic) origin related to long-term variations of solar activity. No peculiarities in relation with the last deep solar minimum in 2008-2009 have been revealed.

  20. Role of Vpma phase variation in Mycoplasma agalactiae pathogenesis

    PubMed Central

    Chopra-Dewasthaly, Rohini; Baumgartner, Martina; Gamper, Erika; Innerebner, Carmen; Zimmermann, Martina; Schilcher, Franz; Tichy, Alexander; Winter, Petra; Rosengarten, Renate; Spergser, Joachim

    2015-01-01

    Compared with other bacterial pathogens, the molecular mechanisms of mycoplasma pathogenicity are largely unknown. Several studies in the past have shown that pathogenic mycoplasmas are equipped with sophisticated genetic systems that allow them to undergo high-frequency surface antigenic variations. Although never clearly proven, these variable mycoplasma surface components are often implicated in host immune evasion and adaptation. Vpma surface lipoproteins of the ruminant pathogen Mycoplasma agalactiae are encoded on a genomic pathogenicity island–like locus and are considered as one of the well-characterized model systems of mycoplasma surface antigenic variation. The present study assesses the role of these phase-variable Vpmas in the molecular pathogenesis of M. agalactiae by testing the wild-type strain PG2 in comparison with the xer1-disrupted Vpma ‘phase-locked’ mutants in sheep infection models. The data clearly illustrate that although Xer1 recombinase is not a virulence factor of M. agalactiae and Vpma phase variation is not necessary for establishing an infection, it might critically influence the survival and persistence of the pathogen under natural field conditions, mainly due to a better capacity for dissemination and evoking systemic responses. This is the first study where mycoplasma ‘phase-locked’ mutants are tested in vivo to elucidate the role of phase variation during infection. PMID:22809092

  1. Humans, Fish, and Whales: How Right Whales Modify Calling Behavior in Response to Shifting Background Noise Conditions.

    PubMed

    Parks, Susan E; Groch, Karina; Flores, Paulo; Sousa-Lima, Renata; Urazghildiiev, Ildar R

    2016-01-01

    This study investigates the role of behavioral plasticity in the variation of sound production of southern right whales (Eubalaena australis) in response to changes in the ambient background noise conditions. Data were collected from southern right whales in Brazilian waters in October and November 2011. The goal of this study was to quantify differences in right whale vocalizations recorded in low background noise as a control, fish chorus noise, and vessel noise. Variation in call parameters were detected among the three background noise conditions and have implications for future studies of noise effects on whale sound production.

  2. Effects of large-scale wind driven turbulence on sound propagation

    NASA Technical Reports Server (NTRS)

    Noble, John M.; Bass, Henry E.; Raspet, Richard

    1990-01-01

    Acoustic measurements made in the atmosphere have shown significant fluctuations in amplitude and phase resulting from the interaction with time varying meteorological conditions. The observed variations appear to have short term and long term (1 to 5 minutes) variations at least in the phase of the acoustic signal. One possible way to account for this long term variation is the use of a large scale wind driven turbulence model. From a Fourier analysis of the phase variations, the outer scales for the large scale turbulence is 200 meters and greater, which corresponds to turbulence in the energy-containing subrange. The large scale turbulence is assumed to be elongated longitudinal vortex pairs roughly aligned with the mean wind. Due to the size of the vortex pair compared to the scale of the present experiment, the effect of the vortex pair on the acoustic field can be modeled as the sound speed of the atmosphere varying with time. The model provides results with the same trends and variations in phase observed experimentally.

  3. Investigating Cardiac MRI Based Right Ventricular Contractility As A Novel Non-Invasive Metric of Pulmonary Arterial Pressure

    PubMed Central

    Menon, Prahlad G; Adhypak, Srilakshmi M; Williams, Ronald B; Doyle, Mark; Biederman, Robert WW

    2014-01-01

    BACKGROUND We test the hypothesis that cardiac magnetic resonance (CMR) imaging-based indices of four-dimensional (4D) (three dimensions (3D) + time) right ventricle (RV) function have predictive values in ascertaining invasive pulmonary arterial systolic pressure (PASP) measurements from right heart catheterization (RHC) in patients with pulmonary arterial hypertension (PAH). METHODS We studied five patients with idiopathic PAH and two age and sex-matched controls for RV function using a novel contractility index (CI) for amplitude and phase to peak contraction established from analysis of regional shape variation in the RV endocardium over 20 cardiac phases, segmented from CMR images in multiple orientations. RESULTS The amplitude of RV contractility correlated inversely with RV ejection fraction (RVEF; R2 = 0.64, P = 0.03) and PASP (R2 = 0.71, P = 0.02). Phase of peak RV contractility also correlated inversely to RVEF (R2 = 0.499, P = 0.12) and PASP (R2 = 0.66, P = 0.04). CONCLUSIONS RV contractility analyzed from CMR offers promising non-invasive metrics for classification of PAH, which are congruent with invasive pressure measurements. PMID:25624777

  4. Phase formation in selected surface-roughened plasma-nitrided 304 austenite stainless steel.

    PubMed

    Singh, Gajendra Prasad; Joseph, Alphonsa; Raole, Prakash Manohar; Barhai, Prema Kanta; Mukherjee, Subroto

    2008-04-01

    Direct current (DC) glow discharge plasma nitriding was carried out on three selected surface-roughened AISI 304 stainless steel samples at 833 K under 4 mbar pressures for 24 h in the presence of N 2 :H 2 gas mixtures of 50 : 50 ratios. After plasma nitriding, the phase formation, case depth, surface roughness, and microhardness of a plasma-nitrided layer were evaluated by glancing angle x-ray diffractogram, optical microscope, stylus profilometer, and Vickers microhardness tester techniques. The case depth, surface hardness, and phase formation variations were observed with a variation in initial surface roughness. The diffraction patterns of the plasma-nitrided samples showed the modified intensities of the α and γ phases along with those of the CrN, Fe 4 N, and Fe 3 N phases. Hardness and case depth variations were observed with a variation in surface roughness. A maximum hardness of 1058 Hv and a case depth of 95 μm were achieved in least surface-roughened samples.

  5. Analysis of temporal variation in human masticatory cycles during gum chewing.

    PubMed

    Crane, Elizabeth A; Rothman, Edward D; Childers, David; Gerstner, Geoffrey E

    2013-10-01

    The study investigated modulation of fast and slow opening (FO, SO) and closing (FC, SC) chewing cycle phases using gum-chewing sequences in humans. Twenty-two healthy adult subjects participated by chewing gum for at least 20s on the right side and at least 20s on the left side while jaw movements were tracked with a 3D motion analysis system. Jaw movement data were digitized, and chewing cycle phases were identified and analysed for all chewing cycles in a complete sequence. All four chewing cycle phase durations were more variant than total cycle durations, a result found in other non-human primates. Significant negative correlations existed between the opening phases, SO and FO, and between the closing phases, SC and FC; however, there was less consistency in terms of which phases were negatively correlated both between subjects, and between chewing sides within subjects, compared with results reported in other species. The coordination of intra-cycle phases appears to be flexible and to follow complex rules during gum-chewing in humans. Alternatively, the observed intra-cycle phase relationships could simply reflect: (1) variation in jaw kinematics due to variation in how gum was handled by the tongue on a chew-by-chew basis in our experimental design or (2) by variation due to data sampling noise and/or how phases were defined and identified. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Long-Time Variation of Magnetic Structure in (Pr xLa 1-x)Co 2Si 2: Coexistence of Slow and Fast Processes in Magnetic Phase Transition

    DOE PAGES

    Motoya, Kiyoichiro; Hagihala, Masato; Shigeoka, Toru; ...

    2017-03-14

    In this paper, long-time variations of the magnetic structure in PrCo 2Si 2 and (Pr 0.98La 0.02)Co 2Si 2 were studied by magnetization and time-resolved neutron scattering measurements. The amplitudes of magnetic Bragg peaks showed marked time variations after cooling or heating across the magnetic transition temperature T 1 between two different antiferromagnetic phases. However, the amplitude of the time variation decreased rapidly with increasing distance from T 1. Finally, we analyzed the results on the basis of a phase transition model that includes the coexistence of fast and slow processes.

  7. Averaged variational principle for autoresonant Bernstein-Greene-Kruskal modes

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Khain, P.; Friedland, L.

    2010-10-15

    Whitham's averaged variational principle is applied in studying dynamics of formation of autoresonant (continuously phase-locked) Bernstein-Greene-Kruskal (BGK) modes in a plasma driven by a chirped frequency ponderomotive wave. A flat-top electron velocity distribution is used as a model allowing a variational formulation within the water bag theory. The corresponding Lagrangian, averaged over the fast phase variable yields evolution equations for the slow field variables, allows uniform description of all stages of excitation of driven-chirped BGK modes, and predicts modulational stability of these nonlinear phase-space structures. Numerical solutions of the system of slow variational equations are in good agreement with Vlasov-Poissonmore » simulations.« less

  8. A wideband analog correlator system for AMiBA

    NASA Astrophysics Data System (ADS)

    Li, Chao-Te; Kubo, Derek; Han, Chih-Chiang; Chen, Chung-Cheng; Chen, Ming-Tang; Lien, Chun-Hsien; Wang, Huei; Wei, Ray-Ming; Yang, Chia-Hsiang; Chiueh, Tzi-Dar; Peterson, Jeffrey; Kesteven, Michael; Wilson, Warwick

    2004-10-01

    A wideband correlator system with a bandwidth of 16 GHz or more is required for Array for Microwave Background Anisotropy (AMiBA) to achieve the sensitivity of 10μK in one hour of observation. Double-balanced diode mixers were used as multipliers in 4-lag correlator modules. Several wideband modules were developed for IF signal distribution between receivers and correlators. Correlator outputs were amplified, and digitized by voltage-to-frequency converters. Data acquisition circuits were designed using field programmable gate arrays (FPGA). Subsequent data transfer and control software were based on the configuration for Australia Telescope Compact Array. Transform matrix method will be adopted during calibration to take into account the phase and amplitude variations of analog devices across the passband.

  9. The hydrolytic activity of esterases in the yeast Saccharomyces cerevisiae is strain dependent.

    PubMed

    Kwolek-Mirek, Magdalena; Bednarska, Sabina; Zadrąg-Tęcza, Renata; Bartosz, Grzegorz

    2011-11-01

    Ester precursors of fluorogenic or chromogenic probes are often employed in studies of yeast cell biology. This study was aimed at a comparison of the ability of several commonly used laboratory wild-type Saccharomyces cerevisiae strains to hydrolyse the following model esters: fluorescein diacetate, 2-naphthyl acetate, PNPA (p-nitrophenyl acetate) and AMQI (7-acetoxy-1-methylquinolinum iodide). In all the strains, the esterase activity was localized mainly to the cytosol. Considerable differences in esterase activity were observed between various wild-type laboratory yeast strains. The phase of growth also contributed to the variation in esterase activity of the yeast. This diversity implies the need for caution in using intracellularly hydrolysed probes for a comparison of yeast strains with various genetic backgrounds.

  10. Achromatic half-wave plate for submillimeter instruments in cosmic microwave background astronomy: modeling and simulation.

    PubMed

    Savini, Giorgio; Pisano, Giampaolo; Ade, Peter A R

    2006-12-10

    We adopted an existing formalism and modified it to simulate, with high precision, the transmission, reflection, and absorption of multiple-plate birefringent devices as a function of frequency. To validate the model, we use it to compare the measured properties of an achromatic five-plate device with a broadband antireflection coating to expectations derived from the material optical constants and its geometric configuration. The half-wave plate presented here is observed to perform well with a phase shift variation of < 2 degrees from the ideal 180 degrees over a bandwidth of Deltav/v approximately 1 at millimeter wavelengths. This formalism represents a powerful design tool for birefringent polarization modulators and enables its optical properties to be specified with high accuracy.

  11. Study of the GERDA Phase II background spectrum

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Allardt, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Belyaev, S. T.; Benato, G.; Bettini, A.; Bezrukov, L.; Bode, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; Di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Frodyma, N.; Gangapshev, A.; Garfagnini, A.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Janicskó Csáthy, J.; Jochum, J.; Junker, M.; Kazalov, V.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Lehnert, B.; Liao, H. Y.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Medinaceli, E.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Palioselitis, D.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Salathe, M.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schulz, O.; Schütz, A.-K.; Schwingenheuer, B.; Selivanenko, O.; Shevzik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zuber, K.; Zuzel, G.

    2017-09-01

    The Gerda experiment, located at the Laboratori Nazionali del Gran Sasso (LNGS) of INFN in Italy, searches for the neutrinoless double beta (0νββ) decay of 76Ge. Gerda Phase II is aiming to reach a sensitivity for the 0νββ half life of 1026 yr in ˜ 3 years of physics data taking with 100 kg·yr of exposure and a background index of ˜ 10-3 cts/(keV·kg·yr). After 6 months of acquisition a first data release with 10.8 kg·yr of exposure is performed, showing that the design background is achieved. In this work a study of the Phase II background spectrum, the main spectral structures and the background sources will be presented and discussed.

  12. Stimulus background influences phase invariant coding by correlated neural activity

    PubMed Central

    Metzen, Michael G; Chacron, Maurice J

    2017-01-01

    Previously we reported that correlations between the activities of peripheral afferents mediate a phase invariant representation of natural communication stimuli that is refined across successive processing stages thereby leading to perception and behavior in the weakly electric fish Apteronotus leptorhynchus (Metzen et al., 2016). Here, we explore how phase invariant coding and perception of natural communication stimuli are affected by changes in the sinusoidal background over which they occur. We found that increasing background frequency led to phase locking, which decreased both detectability and phase invariant coding. Correlated afferent activity was a much better predictor of behavior as assessed from both invariance and detectability than single neuron activity. Thus, our results provide not only further evidence that correlated activity likely determines perception of natural communication signals, but also a novel explanation as to why these preferentially occur on top of low frequency as well as low-intensity sinusoidal backgrounds. DOI: http://dx.doi.org/10.7554/eLife.24482.001 PMID:28315519

  13. Weak variations of Lipschitz graphs and stability of phase boundaries

    NASA Astrophysics Data System (ADS)

    Grabovsky, Yury; Kucher, Vladislav A.; Truskinovsky, Lev

    2011-03-01

    In the case of Lipschitz extremals of vectorial variational problems, an important class of strong variations originates from smooth deformations of the corresponding non-smooth graphs. These seemingly singular variations, which can be viewed as combinations of weak inner and outer variations, produce directions of differentiability of the functional and lead to singularity-centered necessary conditions on strong local minima: an equality, arising from stationarity, and an inequality, implying configurational stability of the singularity set. To illustrate the underlying coupling between inner and outer variations, we study in detail the case of smooth surfaces of gradient discontinuity representing, for instance, martensitic phase boundaries in non-linear elasticity.

  14. Response of hot element flush wall gauges in oscillating laminar flow

    NASA Technical Reports Server (NTRS)

    Giddings, T. A.; Cook, W. J.

    1986-01-01

    The time dependent response characteristics of flush-mounted hot element gauges used as instruments to measure wall shear stress in unsteady periodic air flows were investigated. The study was initiated because anomalous results were obtained from the gauges in oscillating turbulent flows for the phase relation of the wall shear stress variation, indicating possible gauge response problems. Flat plate laminar oscillating turbulent flows characterized by a mean free stream velocity with a superposed sinusoidal variation were performed. Laminar rather than turbulent flows were studied, because a numerical solution for the phase angle between the free stream velocity and the wall shear stress variation that is known to be correct can be obtained. The focus is on comparing the phase angle indicated by the hot element gauges with corresponding numerical prediction for the phase angle, since agreement would indicate that the hot element gauges faithfully follow the true wall shear stress variation.

  15. Determination of perchlorate in drinking water by ion chromatography using macrocycle-based concentration and separation methods.

    PubMed

    Lamb, John D; Simpson, David; Jensen, Bryce D; Gardner, Joseph S; Peterson, Quinn P

    2006-06-16

    Macrocycle-based ion chromatography provides a convenient, reliable method for the determination of perchlorate ion, which is currently of great interest to the environmental community. This study shows that effective perchlorate determinations can be made using standard conductimetric detection by combining an 18-crown-6-based mobile phase with an underivatized reversed-phase mobile phase ion chromatography (MPIC) column. One unique feature of this method is the flexibility in column capacity that is achieved through simple variations in eluent concentrations of 18-crown-6 and KOH, facilitating the separation of target analyte anions such as perchlorate. Using a standard anion exchange column as concentrator makes possible the determination of perchlorate as low as 0.2 ug/L in low ionic strength matrices. Determination of perchlorate at the sub-ug/L level in pure water and in spiked local city hard water samples with high background ion concentrations can be achieved this way. However, like other IC techniques, this method is challenged to achieve analyses at the ug/L level in the demanding high ionic strength matrix described by the United States Environmental Protection Agency (EPA) (1,000 mg/L chloride, sulfate and carbonate). We approached this challenge by use of the Cryptand C1 concentrator column, provided by Dionex Corporation, to effectively preconcentrate perchlorate while reducing background ion concentrations in the high ionic strength matrix. The retention characteristics of the concentrator column were studied in order to maximize its effectiveness for perchlorate determinations. The method makes possible the determination of perchlorate at the 5 ug/L level in the highest ionic strength matrix described by the EPA.

  16. Cosmological backgrounds of gravitational waves and eLISA/NGO: phase transitions, cosmic strings and other sources

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Binétruy, Pierre; Dufaux, Jean-François; Bohé, Alejandro

    We review several cosmological backgrounds of gravitational waves accessible to direct-detection experiments, with a special emphasis on those backgrounds due to first-order phase transitions and networks of cosmic (super-)strings. For these two particular sources, we revisit in detail the computation of the gravitational wave background and improve the results of previous works in the literature. We apply our results to identify the scientific potential of the NGO/eLISA mission of ESA regarding the detectability of cosmological backgrounds.

  17. SAR Observation and Numerical Simulation of Internal Solitary Wave Refraction and Reconnection Behind the Dongsha Atoll

    NASA Astrophysics Data System (ADS)

    Jia, T.; Liang, J. J.; Li, X.-M.; Sha, J.

    2018-01-01

    The refraction and reconnection of internal solitary waves (ISWs) around the Dongsha Atoll (DSA) in the northern South China Sea (SCS) are investigated based on spaceborne synthetic aperture radar (SAR) observations and numerical simulations. In general, a long ISW front propagating from the deep basin of the northern SCS splits into northern and southern branches when it passes the DSA. In this study, the statistics of Envisat Advanced SAR (ASAR) images show that the northern and southern wave branches can reconnect behind the DSA, but the reconnection location varies. A previously developed nonlinear refraction model is set up to simulate the refraction and reconnection of the ISWs behind the DSA, and the model is used to evaluate the effects of ocean stratification, background currents, and incoming ISW characteristics at the DSA on the variation in reconnection locations. The results of the first realistic simulation agree with consecutive TerraSAR-X (TSX) images captured within 12 h of each other. Further sensitivity simulations show that ocean stratification, background currents, and initial wave amplitudes all affect the phase speeds of wave branches and therefore shift their reconnection locations while shapes and locations of incoming wave branches upstream of the DSA profoundly influence the subsequent propagation paths. This study clarifies the variation in reconnection locations of ISWs downstream of the DSA and reveals the important mechanisms governing the reconnection process, which can improve our understanding of the propagation of ISWs near the DSA.

  18. Background levels of methane in Mars' atmosphere show strong seasonal variations.

    PubMed

    Webster, Christopher R; Mahaffy, Paul R; Atreya, Sushil K; Moores, John E; Flesch, Gregory J; Malespin, Charles; McKay, Christopher P; Martinez, German; Smith, Christina L; Martin-Torres, Javier; Gomez-Elvira, Javier; Zorzano, Maria-Paz; Wong, Michael H; Trainer, Melissa G; Steele, Andrew; Archer, Doug; Sutter, Brad; Coll, Patrice J; Freissinet, Caroline; Meslin, Pierre-Yves; Gough, Raina V; House, Christopher H; Pavlov, Alexander; Eigenbrode, Jennifer L; Glavin, Daniel P; Pearson, John C; Keymeulen, Didier; Christensen, Lance E; Schwenzer, Susanne P; Navarro-Gonzalez, Rafael; Pla-García, Jorge; Rafkin, Scot C R; Vicente-Retortillo, Álvaro; Kahanpää, Henrik; Viudez-Moreiras, Daniel; Smith, Michael D; Harri, Ari-Matti; Genzer, Maria; Hassler, Donald M; Lemmon, Mark; Crisp, Joy; Sander, Stanley P; Zurek, Richard W; Vasavada, Ashwin R

    2018-06-08

    Variable levels of methane in the martian atmosphere have eluded explanation partly because the measurements are not repeatable in time or location. We report in situ measurements at Gale crater made over a 5-year period by the Tunable Laser Spectrometer on the Curiosity rover. The background levels of methane have a mean value 0.41 ± 0.16 parts per billion by volume (ppbv) (95% confidence interval) and exhibit a strong, repeatable seasonal variation (0.24 to 0.65 ppbv). This variation is greater than that predicted from either ultraviolet degradation of impact-delivered organics on the surface or from the annual surface pressure cycle. The large seasonal variation in the background and occurrences of higher temporary spikes (~7 ppbv) are consistent with small localized sources of methane released from martian surface or subsurface reservoirs. Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  19. On the response to ocean surface currents in synthetic aperture radar imagery

    NASA Technical Reports Server (NTRS)

    Phillips, O. M.

    1984-01-01

    The balance of wave action spectral density for a fixed wave-number is expressed in terms of a new dimensionless function, the degree of saturation, b, and is applied to an analysis of the variations of this quantity (and local spectral level) at wave-numbers large compared to that of the spectral peak, that are produced by variations in the ocean surface currents in the presence of wind input and wave breaking. Particular care is taken to provide physically based representations of wind input and loss by wave breaking and a relatively convenient equation is derived that specifies the distribution of the degree of saturation in a current field, relative to its ambient (undisturbed) background in the absence of currents. The magnitude of the variations in b depends on two parameters, U(o)/c, where U/(o) is the velocity scale of the current and c the phase speed of the surface waves at the (fixed) wave-number considered or sampled by SAR, and S = (L/lambda) (u*/c)(2), where L is the length scale of the current distribution, lambda the wavelength of the surface waves the length scale of the current distribution, lambda the wavelength of the surface waves and u* the friction velocity of the wind.

  20. Variational Transition State Theory

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Truhlar, Donald G.

    2016-09-29

    This is the final report on a project involving the development and applications of variational transition state theory. This project involved the development of variational transition state theory for gas-phase reactions, including optimized multidimensional tunneling contributions and the application of this theory to gas-phase reactions with a special emphasis on developing reaction rate theory in directions that are important for applications to combustion. The development of variational transition state theory with optimized multidimensional tunneling as a useful computational tool for combustion kinetics involved eight objectives.

  1. A post-reconstruction method to correct cupping artifacts in cone beam breast computed tomography

    PubMed Central

    Altunbas, M. C.; Shaw, C. C.; Chen, L.; Lai, C.; Liu, X.; Han, T.; Wang, T.

    2007-01-01

    In cone beam breast computed tomography (CT), scattered radiation leads to nonuniform biasing of CT numbers known as a cupping artifact. Besides being visual distractions, cupping artifacts appear as background nonuniformities, which impair efficient gray scale windowing and pose a problem in threshold based volume visualization/segmentation. To overcome this problem, we have developed a background nonuniformity correction method specifically designed for cone beam breast CT. With this technique, the cupping artifact is modeled as an additive background signal profile in the reconstructed breast images. Due to the largely circularly symmetric shape of a typical breast, the additive background signal profile was also assumed to be circularly symmetric. The radial variation of the background signals were estimated by measuring the spatial variation of adipose tissue signals in front view breast images. To extract adipose tissue signals in an automated manner, a signal sampling scheme in polar coordinates and a background trend fitting algorithm were implemented. The background fits compared with targeted adipose tissue signal value (constant throughout the breast volume) to get an additive correction value for each tissue voxel. To test the accuracy, we applied the technique to cone beam CT images of mastectomy specimens. After correction, the images demonstrated significantly improved signal uniformity in both front and side view slices. The reduction of both intra-slice and inter-slice variations in adipose tissue CT numbers supported our observations. PMID:17822018

  2. New Global Electron Density Observations from GPS-RO in the D- and E-Region Ionosphere

    NASA Technical Reports Server (NTRS)

    Wu, Dong L.

    2017-01-01

    A novel retrieval technique is developed for electron density (N(sub e)) in the D- and E-region (80-120 km) using the high-quality 50-Hz GPS radio occultation (GPS-RO) phase measurements. The new algorithm assumes a slow, linear variation in the F-region background when the GPS-RO passes through the D- and E-region, and extracts the N(sub e) profiles at 80-130 km from the phase advance signal caused by N(sub e). Unlike the conventional Abel function, the new approach produces a sharp N(sub e) weighting function in the lower ionosphere, and the N(sub e) retrievals are in good agreement with the IRI (International Reference Ionosphere) model in terms of monthly maps, zonal means and diurnal variations. The daytime GPS-RO N(sub e) profiles can be well characterized by the alpha-Chapman function of three parameters (N(sub mE), h(sub mE) and H), showing that the bottom of E-region is deepening and sharpening towards the summer pole. At high latitudes the monthly GPS-RO N(sub e) maps at 80-120 km reveal clear enhancement in the auroral zones, more prominent at night, as a result of energetic electron precipitation (EEP) from the outer radiation belt. The D-/E-region auroral N(sub e) is strongly correlated with K(sub p) on a daily basis. The new N(sub e) data allow further comprehensive analyses of the sporadic E (E(sub s)) phenomena in connection with the background N(sub e) in the E-region. The layered (2-10 km) and fluctuated (less than 2 km) E(sub s) components, namely N(sub e_Layer) than N(sub e_Pert), are extracted with respect to the background N( sub e_Region) on a profile-by-profile basis. The N(sub e_Layer) component has a strong but highly-refined peak at approximately 105 km, with an amplitude smaller than N(sub e_Region) approximately by an order of magnitude. The N(sub e_Pert) component, which was studied extensively in the past, is approximately 2 orders of magnitude weaker than N(sub e_Layer). Both N(sub e_Layer) and N(sub e_Pert) are subject to significant diurnal and semidiurnal variations, showing downward progression with local time in amplitude. The 11-year solar cycle dominates the N(sub e) interannual variations, showing larger N(sub e_Region) and N(sub e_Layer) but smaller N(sub e_Pert) amplitudes in the solar maximum years. Enhanced Ne profiles are often observed in the polar winter, showing good correlation with solar proton events (SPEs) and geomagnetic activity. The new methodology offers great potential for retrieving low N(sub e) in the D-region, where radio propagation and communication blackouts can occur due to enhanced ionization. For space weather applications it is recommended for GPSRO operations to raise the top of high-rate data acquisition to approximately 140 km in the future.

  3. Endogenous Delta/Theta Sound-Brain Phase Entrainment Accelerates the Buildup of Auditory Streaming.

    PubMed

    Riecke, Lars; Sack, Alexander T; Schroeder, Charles E

    2015-12-21

    In many natural listening situations, meaningful sounds (e.g., speech) fluctuate in slow rhythms among other sounds. When a slow rhythmic auditory stream is selectively attended, endogenous delta (1‒4 Hz) oscillations in auditory cortex may shift their timing so that higher-excitability neuronal phases become aligned with salient events in that stream [1, 2]. As a consequence of this stream-brain phase entrainment [3], these events are processed and perceived more readily than temporally non-overlapping events [4-11], essentially enhancing the neural segregation between the attended stream and temporally noncoherent streams [12]. Stream-brain phase entrainment is robust to acoustic interference [13-20] provided that target stream-evoked rhythmic activity can be segregated from noncoherent activity evoked by other sounds [21], a process that usually builds up over time [22-27]. However, it has remained unclear whether stream-brain phase entrainment functionally contributes to this buildup of rhythmic streams or whether it is merely an epiphenomenon of it. Here, we addressed this issue directly by experimentally manipulating endogenous stream-brain phase entrainment in human auditory cortex with non-invasive transcranial alternating current stimulation (TACS) [28-30]. We assessed the consequences of these manipulations on the perceptual buildup of the target stream (the time required to recognize its presence in a noisy background), using behavioral measures in 20 healthy listeners performing a naturalistic listening task. Experimentally induced cyclic 4-Hz variations in stream-brain phase entrainment reliably caused a cyclic 4-Hz pattern in perceptual buildup time. Our findings demonstrate that strong endogenous delta/theta stream-brain phase entrainment accelerates the perceptual emergence of task-relevant rhythmic streams in noisy environments. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. A systematic analysis of the XMM-Newton background: III. Impact of the magnetospheric environment

    NASA Astrophysics Data System (ADS)

    Ghizzardi, Simona; Marelli, Martino; Salvetti, David; Gastaldello, Fabio; Molendi, Silvano; De Luca, Andrea; Moretti, Alberto; Rossetti, Mariachiara; Tiengo, Andrea

    2017-12-01

    A detailed characterization of the particle induced background is fundamental for many of the scientific objectives of the Athena X-ray telescope, thus an adequate knowledge of the background that will be encountered by Athena is desirable. Current X-ray telescopes have shown that the intensity of the particle induced background can be highly variable. Different regions of the magnetosphere can have very different environmental conditions, which can, in principle, differently affect the particle induced background detected by the instruments. We present results concerning the influence of the magnetospheric environment on the background detected by EPIC instrument onboard XMM-Newton through the estimate of the variation of the in-Field-of-View background excess along the XMM-Newton orbit. An important contribution to the XMM background, which may affect the Athena background as well, comes from soft proton flares. Along with the flaring component a low-intensity component is also present. We find that both show modest variations in the different magnetozones and that the soft proton component shows a strong trend with the distance from Earth.

  5. Assessment of Musculoskeletal Strength and Levels of Fatigue during Different Phases of Menstrual Cycle in Young Adults

    PubMed Central

    D Souza, Urban John; Shivaprakash, G

    2017-01-01

    Introduction Some of the physiological factors and athletic performance might show variation along the phases of menstrual cycle. The alterations seen in these physiological parameters of various systems relating to oscillations in hormonal levels do affect the autonomic nervous system and metabolic functions. Former studies heave inconclusively about the influence of hormones on exercise performance, predominantly muscle strength and rate of fatigue during different phases of the menstrual cycle. Studies regarding influence of these variations during bleeding phase were not done. Aim To evaluate the muscle strength variations and also the rate of fatigue during various phases of the menstrual cycle in young adults. Materials and Methods This was a prospective study conducted among 100 healthy adult female volunteers aged 18-24 years, with normal regular menstrual cycles persistent between 26- 32 days (average of 28 days), for a minimum of last 6 months. Muscle strength was assessed by calculating the work done and fatigue rate using Mosso’s ergograph and by handgrip dynamometer strength. Each subject was evaluated consecutively for two menstrual cycles in all three phases which were classified as Phase 1- Menstrual phase, Phase 2- Follicular phase and Phase 3- Luteal phase. The data obtained was analysed by statistical tool One-way ANOVA followed by a post-hoc Tukeys test. A p-value of ≤ 0.05 was considered significant. Results The amount of work done and handgrip strength was significantly higher in phase 2 (p<0.001) and relatively reduced in phase 1 and 3 (p<0.001) of menstrual cycle. In terms of fatigue rate percentage, phase 2 showed significantly lesser values (p<0.001) as compared to phase 1 and 3 of menstrual cycle. Conclusion We conclude that the cyclical variation in endogenous reproductive hormones increases the muscle strength in follicular phase of the menstrual cycle. Thus provide support for the influence of these hormones in regulation of these parameters in the premenopausal age group. PMID:28384857

  6. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kubo, Jisuke; Yamada, Masatoshi; Institut für Theoretische Physik, Universität Heidelberg,Philosophenweg 16, 69120 Heidelberg

    We assume that the origin of the electroweak (EW) scale is a gauge-invariant scalar-bilinear condensation in a strongly interacting non-abelian gauge sector, which is connected to the standard model via a Higgs portal coupling. The dynamical scale genesis appears as a phase transition at finite temperature, and it can produce a gravitational wave (GW) background in the early Universe. We find that the critical temperature of the scale phase transition lies above that of the EW phase transition and below few O(100) GeV and it is strongly first-order. We calculate the spectrum of the GW background and find the scalemore » phase transition is strong enough that the GW background can be observed by DECIGO.« less

  7. Reduction of observer variation using matched CT-PET for lung cancer delineation: A three-dimensional analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Steenbakkers, Roel; Duppen, Joop C.; Fitton, Isabelle

    2006-02-01

    Purpose: Target delineation using only CT information introduces large geometric uncertainties in radiotherapy for lung cancer. Therefore, a reduction of the delineation variability is needed. The impact of including a matched CT scan with 2-[{sup 18}F]fluoro-2-deoxy-D-glucose positron emission tomography (FDG-PET) and adaptation of the delineation protocol and software on target delineation in lung cancer was evaluated in an extensive multi-institutional setting and compared with the delineations using CT only. Methods and Materials: The study was separated into two phases. For the first phase, 11 radiation oncologists (observers) delineated the gross tumor volume (GTV), including the pathologic lymph nodes of 22more » lung cancer patients (Stages I-IIIB) on CT only. For the second phase (1 year later), the same radiation oncologists delineated the GTV of the same 22 patients on a matched CT-FDG-PET scan using an adapted delineation protocol and software (according to the results of the first phase). All delineated volumes were analyzed in detail. The observer variation was computed in three dimensions by measuring the distance between the median GTV surface and each individual GTV. The variation in distance of all radiation oncologists was expressed as a standard deviation. The observer variation was evaluated for anatomic regions (lung, mediastinum, chest wall, atelectasis, and lymph nodes) and interpretation regions (agreement and disagreement; i.e., >80% vs. <80% of the radiation oncologists delineated the same structure, respectively). All radiation oncologist-computer interactions were recorded and analyzed with a tool called 'Big Brother.' Results: The overall three-dimensional observer variation was reduced from 1.0 cm (SD) for the first phase (CT only) to 0.4 cm (SD) for the second phase (matched CT-FDG-PET). The largest reduction in the observer variation was seen in the atelectasis region (SD 1.9 cm reduced to 0.5 cm). The mean ratio between the common and encompassing volume was 0.17 and 0.29 for the first and second phases, respectively. For the first phase, the common volume was 0 in 4 patients (i.e., no common point for all GTVs). In the second phase, the common volume was always >0. For all anatomic regions, the interpretation differences among the radiation oncologists were reduced. The amount of disagreement was 45% and 18% for the first and second phase, respectively. Furthermore, the mean delineation time (12 vs. 16 min, p < 0.001) and mean number of corrections (25 vs. 39, p < 0.001) were reduced in the second phase compared with the first phase. Conclusion: For high-precision radiotherapy, the delineation of lung target volumes using only CT introduces too great a variability among radiation oncologists. Implementing matched CT-FDG-PET and adapted delineation protocol and software reduced observer variation in lung cancer delineation significantly with respect to CT only. However, the remaining observer variation was still large compared with other geometric uncertainties (setup variation and organ motion)« less

  8. Computational Assessment of Naturally Occurring Neutron and Photon Background Radiation Produced by Extraterrestrial Sources

    DOE PAGES

    Miller, Thomas Martin; de Wet, Wouter C.; Patton, Bruce W.

    2015-10-28

    In this study, a computational assessment of the variation in terrestrial neutron and photon background from extraterrestrial sources is presented. The motivation of this assessment is to evaluate the practicality of developing a tool or database to estimate background in real time (or near–real time) during an experimental measurement or to even predict the background for future measurements. The extraterrestrial source focused on during this assessment is naturally occurring galactic cosmic rays (GCRs). The MCNP6 transport code was used to perform the computational assessment. However, the GCR source available in MCNP6 was not used. Rather, models developed and maintained bymore » NASA were used to generate the GCR sources. The largest variation in both neutron and photon background spectra was found to be caused by changes in elevation on Earth's surface, which can be as large as an order of magnitude. All other perturbations produced background variations on the order of a factor of 3 or less. The most interesting finding was that ~80% and 50% of terrestrial background neutrons and photons, respectively, are generated by interactions in Earth's surface and other naturally occurring and man-made objects near a detector of particles from extraterrestrial sources and their progeny created in Earth's atmosphere. In conclusion, this assessment shows that it will be difficult to estimate the terrestrial background from extraterrestrial sources without a good understanding of a detector's surroundings. Therefore, estimating or predicting background during a measurement environment like a mobile random search will be difficult.« less

  9. Phase and amplitude Variation of Weddell Sea Anomaly at King Sejong Station in Antarctic between 2005 and 2009

    NASA Astrophysics Data System (ADS)

    Chung, J.; Lee, C.; Jee, G.

    2011-12-01

    The Weddell Sea Anomaly (WSA) in ionosphere has been defined by higher electron density at nighttime than during the daytime on summer season near the region of the Weddell Sea.Recent studies show the WSA is an extreme case of longitudinal variation and occurrs all of season except for winter when F10.7 is high. We examine the temporal variation of the WSA using the ground-based GPS TEC measured King Sejong station (geographic latitude 62.2°S, longitude 58.5°W, corrected geomagnetic latitude 48°S) in Antarctic between 2005 and 2009 in condition of solar minimum. We analyze the characteristics of diurnal and semi-diurnal variation for all of years and examine the yearly and seasonal variation of phase and amplitude of the WSA. Our results of local time GPS TEC variation show the amplitudes of the WSA are significant in the summer and its phases appear to be changed according to the season.

  10. The correlation of VLF propagation variations with atmospheric planetary-scale waves

    NASA Technical Reports Server (NTRS)

    Cavalieri, D. J.; Deland, R. J.; Potemra, T. A.; Gavin, R. F.

    1973-01-01

    Variations in the received daytime phase of long distance, cesium-controlled, VLF transmission were compared to the height variations of the 10-mb isobaric surface during the first three months of 1965 and 1969. The VLF phase values are also compared to height variations of constant electron densities in the E-region and to variations of f-min which have been shown to be well correlated with planetary-scale variations in the stratosphere by Deland and Cavalieri (1973). The VLF phase variations show good correlation with these previous ionospheric measurements and with the 10-mb surfaces. The planetary scale waves in the stratosphere are shown to be travelling on the average eastward in 1965 and westward in 1969. These correlations are interpreted as due to the propagation of travelling planetary scale waves with westward tilted wave fronts. Upward energy transport due to the vertical structure of those waves is also discussed. These correlations provide further evidence for the coupling between the lower ionosphere at about 70 km altitude (the daytime VLF reflection height and the stratosphere, and they demonstrate the importance of planetary wave phenomena to VLF propagation.

  11. The Lyman-alpha Imager onboard Solar Polar Orbit Telescope

    NASA Astrophysics Data System (ADS)

    Li, Baoquan; Li, Haitao; Zhou, Sizhong; Jiang, Bo

    2013-12-01

    Solar Polar ORbit Telescope (SPORT) was originally proposed in 2004 by the National Space Science Center, Chinese Academy of Sciences, which is currently being under background engineering study phase in China. SPORT will carry a suite of remote-sensing and in-situ instruments to observe coronal mass ejections (CMEs), solar high-latitude magnetism, and the fast solar wind from a polar orbit around the Sun. The Lyman-alpha Imager (LMI) is one of the key remotesensing instruments onboard SPORT with 45arcmin FOV, 2000mm effective focal length and 1.4arcsec/pixel spatial resolution . The size of LMI is φ150×1000mm, and the weight is less than10kg, including the 7kg telescope tube and 3kg electronic box. There are three 121.6nm filters used in the LMI optical path, so the 98% spectral purity image of 121.6nm can be achieved. The 121.6nm solar Lyman-alpha line is produced in the chromosphere and very sensitive to plasma temperature, plasma velocity and magnetism variation in the chromosphere. Solar Lyman-alpha disk image is an ideal tracker for corona magnetism variation.

  12. Spectra of Baroclinic Inertia-Gravity Wave Turbulence

    NASA Technical Reports Server (NTRS)

    Glazman, Roman E.

    1996-01-01

    Baroclinic inertia-gravity (IG) waves form a persistent background of thermocline depth and sea surface height oscillations. They also contribute to the kinetic energy of horizontal motions in the subsurface layer. Measured by the ratio of water particle velocity to wave phase speed, the wave nonlinearity may be rather high. Given a continuous supply of energy from external sources, nonlinear wave-wave interactions among IG waves would result in inertial cascades of energy, momentum, and wave action. Based on a recently developed theory of wave turbulence in scale-dependent systems, these cascades are investigated and IG wave spectra are derived for an arbitrary degree of wave nonlinearity. Comparisons with satellite-altimetry-based spectra of surface height variations and with energy spectra of horizontal velocity fluctuations show good agreement. The well-known spectral peak at the inertial frequency is thus explained as a result of the inverse cascade. Finally, we discuss a possibility of inferring the internal Rossby radius of deformation and other dynamical properties of the upper thermocline from the spectra of SSH (sea surface height) variations based on altimeter measurements.

  13. Two-frequency timing of the pulsar B1937+21 in Kalyazin and Kashima in 1997 2002

    NASA Astrophysics Data System (ADS)

    Ilyasov, Yu. P.; Imae, M.; Hanado, Y.; Oreshko, V. V.; Potapov, V. A.; Rodin, A. E.; Sekido, M.

    2005-01-01

    We present the results from our timing of the millisecond pulsar B1937+21, performed jointly since 1997 on two radio telescopes: the RT-64 in Kalyazin (Russia) at a frequency of 0.6GHz and RT-34 in Kashima (Japan) at a frequency of 2.15 GHz. The rms value of the pulse time of arrival (TOA) residuals for the pulsar at the barycenter of the Solar system is 1.8 μs (the relative variation is ≈10-14 over the observing period). The TOA residuals are shown to be dominated by white phase noise, which allows this pulsar to be used as an independent time scale keeper. The upper limit for the gravitational background energy density Ωg h 2 at frequencies ≈6.5 × 10-9 Hz is estimated to be no higher than 10-6. Based on the long-term timing of the pulsar, we have improved its parameters and accurately determined the dispersion measure and its time variation over the period 1984 2002, which was, on average, -0.00114(3) pc cm-3 yr-1.

  14. Theory of microemulsions in a gravitational field

    NASA Technical Reports Server (NTRS)

    Jeng, J. F.; Miller, Clarence A.

    1989-01-01

    A theory of microemulsions developed previously is extended to include the effect of a gravitational field. It predicts variation with position of drop size, drop volume fraction, and area per molecule in the surfactant films within a microemulsion phase. Variation in volume fraction is greatest and occurs in such a way that oil content increases with increasing elevation, as has been found experimentally. Large composition variations are predicted within a middle phase microemulsion near optimal conditions because inversion from the water-continuous to the oil-continuous arrangement occurs with increasing elevation. Generally speaking, gravity reduces solubilization within microemulsions and promotes separation of excess phases.

  15. Diurnal Variation in Gravity Wave Activity at Low and Middle Latitudes

    NASA Technical Reports Server (NTRS)

    Andrioli, V. F.; Fritts, D. C.; Batista, P. P.; Clemesha, B. R.; Janches, Diego

    2013-01-01

    We employ a modified composite day extension of the Hocking (2005) analysis method to study gravity wave (GW) activity in the mesosphere and lower thermosphere using 4 meteor radars spanning latitudes from 7deg S to 53.6deg S. Diurnal and semidiurnal modulations were observed in GW variances over all sites. Semidiurnal modulation with downward phase propagation was observed at lower latitudes mainly near the equinoxes. Diurnal modulations occur mainly near solstice and, except for the zonal component at Cariri (7deg S), do not exhibit downward phase propagation. At a higher latitude (SAAMER, 53.6deg S) these modulations are only observed in the meridional component where we can observe diurnal variation from March to May, and semidiurnal, during January, February, October (above 88 km) and November. Some of these modulations with downward phase progression correlate well with wind shear. When the wind shear is well correlated with the maximum of the variances the diurnal tide has its largest amplitudes, i.e., near equinox. Correlations exhibiting variations with tidal phases suggest significant GW-tidal interactions that have different characters depending on the tidal components and possible mean wind shears. Modulations that do not exhibit phase variations could be indicative of diurnal variations in GW sources.

  16. Multiview human activity recognition system based on spatiotemporal template for video surveillance system

    NASA Astrophysics Data System (ADS)

    Kushwaha, Alok Kumar Singh; Srivastava, Rajeev

    2015-09-01

    An efficient view invariant framework for the recognition of human activities from an input video sequence is presented. The proposed framework is composed of three consecutive modules: (i) detect and locate people by background subtraction, (ii) view invariant spatiotemporal template creation for different activities, (iii) and finally, template matching is performed for view invariant activity recognition. The foreground objects present in a scene are extracted using change detection and background modeling. The view invariant templates are constructed using the motion history images and object shape information for different human activities in a video sequence. For matching the spatiotemporal templates for various activities, the moment invariants and Mahalanobis distance are used. The proposed approach is tested successfully on our own viewpoint dataset, KTH action recognition dataset, i3DPost multiview dataset, MSR viewpoint action dataset, VideoWeb multiview dataset, and WVU multiview human action recognition dataset. From the experimental results and analysis over the chosen datasets, it is observed that the proposed framework is robust, flexible, and efficient with respect to multiple views activity recognition, scale, and phase variations.

  17. Simulation of Z(3) walls and string production via bubble nucleation in a quark-hadron transition

    NASA Astrophysics Data System (ADS)

    Gupta, Uma Shankar; Mohapatra, Ranjita K.; Srivastava, Ajit M.; Tiwari, Vivek K.

    2010-10-01

    We study the dynamics of confinement-deconfinement phase transition in the context of relativistic heavy-ion collisions within the framework of effective models for the Polyakov loop order parameter. We study the formation of Z(3) walls and associated strings in the initial transition from the confining (hadronic) phase to the deconfining [quark-gluon plasma (QGP)] phase via the so-called Kibble mechanism. Essential physics of the Kibble mechanism is contained in a sort of domain structure arising after any phase transition which represents random variation of the order parameter at distances beyond the typical correlation length. We implement this domain structure by using the Polyakov loop effective model with a first order phase transition and confine ourselves with temperature/time ranges so that the first order confinement-deconfinement transition proceeds via bubble nucleation, leading to a well defined domain structure. The formation of Z(3) walls and associated strings results from the coalescence of QGP bubbles expanding in the confining background. We investigate the evolution of the Z(3) wall and string network. We also calculate the energy density fluctuations associated with Z(3) wall network and strings which decay away after the temperature drops below the quark-hadron transition temperature during the expansion of QGP. We discuss evolution of these quantities with changing temperature via Bjorken’s hydrodynamical model and discuss possible experimental signatures resulting from the presence of Z(3) wall network and associate strings.

  18. Simulation of Z(3) walls and string production via bubble nucleation in a quark-hadron transition

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gupta, Uma Shankar; Tiwari, Vivek K.; Mohapatra, Ranjita K.

    2010-10-01

    We study the dynamics of confinement-deconfinement phase transition in the context of relativistic heavy-ion collisions within the framework of effective models for the Polyakov loop order parameter. We study the formation of Z(3) walls and associated strings in the initial transition from the confining (hadronic) phase to the deconfining [quark-gluon plasma (QGP)] phase via the so-called Kibble mechanism. Essential physics of the Kibble mechanism is contained in a sort of domain structure arising after any phase transition which represents random variation of the order parameter at distances beyond the typical correlation length. We implement this domain structure by using themore » Polyakov loop effective model with a first order phase transition and confine ourselves with temperature/time ranges so that the first order confinement-deconfinement transition proceeds via bubble nucleation, leading to a well defined domain structure. The formation of Z(3) walls and associated strings results from the coalescence of QGP bubbles expanding in the confining background. We investigate the evolution of the Z(3) wall and string network. We also calculate the energy density fluctuations associated with Z(3) wall network and strings which decay away after the temperature drops below the quark-hadron transition temperature during the expansion of QGP. We discuss evolution of these quantities with changing temperature via Bjorken's hydrodynamical model and discuss possible experimental signatures resulting from the presence of Z(3) wall network and associate strings.« less

  19. Active background suppression with the liquid argon scintillation veto of GERDA Phase II

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Allardt, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Belyaev, S. T.; Benato, G.; Bettini, A.; Bezrukov, L.; Bode, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; Di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Frodyma, N.; Gangapshev, A.; Garfagnini, A.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Janicskó Csáthy, J.; Jochum, J.; Junker, M.; Kazalov, V.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Lehnert, B.; Liao, H. Y.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Medinaceli, E.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Palioselitis, D.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Salathe, M.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schulz, O.; Schütz, A.-K.; Schwingenheuer, B.; Selivanenko, O.; Shevzik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zuber, K.; Zuzel, G.

    2017-09-01

    The observation of neutrinoless double beta decay would allow to shed light onto the particle nature of neutrinos. Gerda is aiming to perform a background-free search for this process using high purity germanium detectors enriched in 76Ge operated in liquid argon. This goal relies on the application of active background suppression techniques. A low background light instrumentation has been installed for Phase II to detect events with coincident energy deposition in the nearby liquid argon. The intended background index of ˜10-3 cts/(keV·ky·yr) has been confirmed.

  20. Evaluating the association of common APOA2 variants with type 2 diabetes

    PubMed Central

    Duesing, Konsta; Charpentier, Guillaume; Marre, Michel; Tichet, Jean; Hercberg, Serge; Balkau, Beverley; Froguel, Philippe; Gibson, Fernando

    2009-01-01

    Background APOA2 is a positional and biological candidate gene for type 2 diabetes at the chromosome 1q21-q24 susceptibility locus. The aim of this study was to examine if HapMap phase II tag SNPs in APOA2 are associated with type 2 diabetes and quantitative traits in French Caucasian subjects. Methods We genotyped the three HapMap phase II tagging SNPs (rs6413453, rs5085 and rs5082) required to capture the common variation spanning the APOA2 locus in our type 2 diabetes case-control cohort comprising 3,093 French Caucasian subjects. The association between these variants and quantitative traits was also examined in the normoglycaemic adults of the control cohort. In addition, meta-analysis of publicly available whole genome association data was performed. Results None of the APOA2 tag SNPs were associated with type 2 diabetes in the French Caucasian case-control cohort (rs6413453, P = 0.619; rs5085, P = 0.245; rs5082, P = 0.591). However, rs5082 was marginally associated with total cholesterol levels (P = 0.026) and waist-to-hip ratio (P = 0.029). The meta-analysis of data from 12,387 subjects confirmed our finding that common variation at the APOA2 locus is not associated with type 2 diabetes. Conclusion The available data does not support a role for common variants in APOA2 on type 2 diabetes susceptibility or related quantitative traits in Northern Europeans. PMID:19216768

  1. C5-C12 volatile organic compounds at roadside, residential, and background locations in Ankara, Turkey: temporal and spatial variations and sources.

    PubMed

    Kuntasal, Oznur Oğuz; Kilavuz, Seda Aslan; Karman, Deniz; Wang, Daniel; Tuncel, Gürdal

    2013-10-01

    Concentrations of 91 volatile organic compounds (VOCs) ranging from C5 to C12 were measured at three sites in Ankara, the capital of Turkey, in the summer of 2003 and winter of 2004. Samples were collected at roadside, residential and background stations at consecutive 4-hr intervals over a 24-hr period for six weeks in each season. Air samples were collected onto cartridges packed with Tenax TA and Carbopack B resins and analyzed by thermal desorption, followed by gas chromatography coupled to a mass selective detector (GC/MSD). Time resolved data provided information on ambient levels, temporal and spatial variations and sources of VOCs in Ankara. Toluene is the most abundant compound at all sites with and average concentration of 13.1 ?g m(-3). The mean concentrations of benzene are 12.6, 5.2, and 2.4 ?g m(-3) during winter at roadside, residential and background stations, respectively. Diurnal variation in the data together with toluene to benzene concentration ratio (T:B) that is close to 2.0 indicated the influence of traffic related emissions at residential and roadside stations during winter season. Higher T:B ratio observed at residential and background stations during summer period and correlation analysis indicated additional VOC sources. Temporal variations and low m,p-xylene to ethylbenzene ratio (mpX:E) indicated that transported air mass is the major VOC source influencing VOC concentrations measured at the background station.

  2. Circadian variation of EEG power spectra in NREM and REM sleep in humans: dissociation from body temperature

    NASA Technical Reports Server (NTRS)

    Dijk, D. J.

    1999-01-01

    In humans, EEG power spectra in REM and NREM sleep, as well as characteristics of sleep spindles such as their duration, amplitude, frequency and incidence, vary with circadian phase. Recently it has been hypothesized that circadian variations in EEG spectra in humans are caused by variations in brain or body temperature and may not represent phenomena relevant to sleep regulatory processes. To test this directly, a further analysis of EEG power spectra - collected in a forced desynchrony protocol in which sleep episodes were scheduled to a 28-h period while the rhythms of body temperature and plasma melatonin were oscillating at their near 24-h period - was carried out. EEG power spectra were computed for NREM and REM sleep occurring between 90-120 and 270-300 degrees of the circadian melatonin rhythm, i.e. just after the clearance of melatonin from plasma in the 'morning' and just after the 'evening' increase in melatonin secretion. Average body temperatures during scheduled sleep at these two circadian phases were identical (36.72 degrees C). Despite identical body temperatures, the power spectra in NREM sleep were very different at these two circadian phases. EEG activity in the low frequency spindle range was significantly and markedly enhanced after the evening increase in plasma melatonin as compared to the morning phase. For REM sleep, significant differences in power spectra during these two circadian phases, in particular in the alpha range, were also observed. The results confirm that EEG power spectra in NREM and REM sleep vary with circadian phase, suggesting that the direct contribution of temperature to the circadian variation in EEG power spectra is absent or only minor, and are at variance with the hypothesis that circadian variations in EEG power spectra are caused by variations in temperature.

  3. Tunable geometric Fano resonances in a metal/insulator stack

    NASA Astrophysics Data System (ADS)

    Grotewohl, Herbert

    We present a theoretical analysis of surface-plasmon-mediated mode-coupling in a planar thin film metal/insulator stack. The spatial overlap of a surface plasmon polariton (SPP) and a waveguide mode results in a Fano interference analog. Tuning of the material parameters effects the modes and output fields of the system. Lastly, the intensity and phase sensitivity of the system are compared to a standard surface plasmon resonance (SPR). We begin with background information on Fano interference, an interference effect between two indistinguishable pathways. Originally described for autoionization, we discuss the analogs in other systems. We discuss the features of Fano interference in the mode diagrams, and the Fano resonance observed in the output field. The idea of a geometric Fano resonance (GFR) occurring in the angular domain is presented. Background information on surface plasmon polaritons is covered next. The dielectric properties of metals and how they relate to surface plasmons is first reviewed. The theoretical background of SPPs on an infinite planar surface is covered. The modes of a two planar interface metal/insulator stack are reviewed and the leaky properties of the waveguide are shown in the reflectance. We solve for modes of a three interface metal/insulator stack and shows an avoided crossing in the modes indicative of Fano interference. We observe the asymmetric Fano resonance in the angular domain in the reflectance. The tunability of the material parameters tunes the GFR of the system. The GFR tuning is explored and different Fano lineshapes are observed. We also observe a reversal of the asymmetry Fano lineshape, attributed to the relate phase interactions of the non-interacting modes. The phase of the GFR is calculated and discussed for the variations of the parameters. The reflected field is explored as the insulator permittivities are varied. As the waveguide permittivity is varied, we show there is little response from the system. As the exterior permittivity is varied, the reflectance exhibits the geometric Fano resonance and the tunability of the lineshape is explored. Finally, we calculate the sensitivities of our metal/insulator stack to changes in the permittivity and compare them to the sensitivities of SPRs.

  4. Removing Background Noise with Phased Array Signal Processing

    NASA Technical Reports Server (NTRS)

    Podboy, Gary; Stephens, David

    2015-01-01

    Preliminary results are presented from a test conducted to determine how well microphone phased array processing software could pull an acoustic signal out of background noise. The array consisted of 24 microphones in an aerodynamic fairing designed to be mounted in-flow. The processing was conducted using Functional Beam forming software developed by Optinav combined with cross spectral matrix subtraction. The test was conducted in the free-jet of the Nozzle Acoustic Test Rig at NASA GRC. The background noise was produced by the interaction of the free-jet flow with the solid surfaces in the flow. The acoustic signals were produced by acoustic drivers. The results show that the phased array processing was able to pull the acoustic signal out of the background noise provided the signal was no more than 20 dB below the background noise level measured using a conventional single microphone equipped with an aerodynamic forebody.

  5. Analysis of In-Flight Vibration Measurements from Helicopter Transmissions

    NASA Technical Reports Server (NTRS)

    Mosher, Marianne; Huff, Ed; Barszcz

    2004-01-01

    In-flight vibration measurements from the transmission of an OH-58C KIOWA are analyzed. In order to understand the effect of normal flight variation on signal shape, the first gear mesh components of the planetary gear system and bevel gear are studied in detail. Systematic patterns occur in the amplitude and phase of these signal components with implications for making time synchronous averages and interpreting gear metrics in flight. The phase of the signal component increases as the torque increases; limits on the torque range included in a time synchronous average may now be selected to correspond to phase change limits on the underlying signal. For some sensors and components, an increase in phase variation and/or abrupt change in the slope of the phase dependence on torque are observed in regions of very low amplitude of the signal component. A physical mechanism for this deviation is postulated. Time synchronous averages should not be constructed in torque regions with wide phase variation.

  6. Multipath noise reduction spread spectrum signals

    NASA Technical Reports Server (NTRS)

    Meehan, Thomas K. (Inventor)

    1994-01-01

    The concepts of early-prompt delay tracking, multipath correction of early-prompt delay tracking from correlation shape, and carrier phase multipath correction are addressed. In early-prompt delay tracking, since multipath is always delayed with respect to the direct signals, the system derives phase and pseudorange observables from earlier correlation lags. In multipath correction of early-prompt delay tracking from correlation shape, the system looks for relative variations of amplitude across the code correlation function that do not match the predicted multipath-free code cross-correlation shape. The system then uses deviations from the multipath-free shape to infer the magnitude of multipath, and to generate corrections pseudorange observables. In carrier phase multipath correction, the system looks for variations of phase among plural early and prompt lags. The system uses the measured phase variations, along with the general principle that the multipath errors are larger for later lags, to infer the presence of multipath, and to generate corrections for carrier-phase observables.

  7. Berry phase for spin-1/2 particles moving in a space-time with torsion

    NASA Astrophysics Data System (ADS)

    Alimohammadi, M.; Shariati, A.

    Berry phase for a spin-1/2 particle moving in a flat space-time with torsion is investigated in the context of the Einstein-Cartan-Dirac model. It is shown that if the torsion is due to a dense polarized background, then there is a Berry phase only if the fermion is massless and its momentum is perpendicular to the direction of the background polarization. The order of magnitude of this Berry phase is discussed in other theoretical frameworks.

  8. Method and apparatus for stabilizing pulsed microwave amplifiers

    DOEpatents

    Hopkins, Donald B.

    1993-01-01

    Phase and amplitude variations at the output of a high power pulsed microwave amplifier arising from instabilities of the driving electron beam are suppressed with a feed-forward system that can stabilize pulses which are too brief for regulation by conventional feedback techniques. Such variations tend to be similar during successive pulses. The variations are detected during each pulse by comparing the amplifier output with the low power input signal to obtain phase and amplitude error signals. This enables storage of phase and amplitude correction signals which are used to make compensating changes in the low power input signal during the following amplifier output pulse which suppress the variations. In the preferred form of the invention, successive increments of the correction signals for each pulse are stored in separate channels of a multi-channel storage. Sequential readout of the increments during the next pulse provides variable control voltages to a voltage controlled phase shifter and voltage controlled amplitude modulator in the amplifier input signal path.

  9. Method and apparatus for stabilizing pulsed microwave amplifiers

    DOEpatents

    Hopkins, D.B.

    1993-01-26

    Phase and amplitude variations at the output of a high power pulsed microwave amplifier arising from instabilities of the driving electron beam are suppressed with a feed-forward system that can stabilize pulses which are too brief for regulation by conventional feedback techniques. Such variations tend to be similar during successive pulses. The variations are detected during each pulse by comparing the amplifier output with the low power input signal to obtain phase and amplitude error signals. This enables storage of phase and amplitude correction signals which are used to make compensating changes in the low power input signal during the following amplifier output pulse which suppress the variations. In the preferred form of the invention, successive increments of the correction signals for each pulse are stored in separate channels of a multi-channel storage. Sequential readout of the increments during the next pulse provides variable control voltages to a voltage controlled phase shifter and voltage controlled amplitude modulator in the amplifier input signal path.

  10. Characterization of the Solid-Phase Behavior of n-Nonylammonium Tetrachlorocuprate by Fourier Transform Infrared Spectroscopy

    NASA Astrophysics Data System (ADS)

    Ning, Guo

    1995-06-01

    The solid-phase behavior of [n-C9H19NH3]2CuCl4 was investigated by infrared spectroscopy. The nature of the three solid phases (phase I, phase II, and phase III) is discussed. A temperature-dependent study of infrared spectra provides evidence for the occurrence of structural phase transitions related to the dynamics of the alkyl chains and -NH3 polar heads. The phase transition at Tc1 (22°C) arises from variation in the interaction and packing structure of the chain. The phase transition at Tc2 (34°C) is related to variation in partial conformational order-disorder at the intramolecular level. The GTG or GTG‧ and small concentration of TG structures near the CH3 group are generated in phase III (above 38°C).

  11. Cosmological structure formation from soft topological defects

    NASA Technical Reports Server (NTRS)

    Hill, Christopher T.; Schramm, David N.; Fry, J. N.

    1988-01-01

    Some models have extremely low-mass pseudo-Goldstone bosons that can lead to vacuum phase transitions at late times, after the decoupling of the microwave background.. This can generate structure formation at redshifts z greater than or approx 10 on mass scales as large as M approx 10 to the 18th solar masses. Such low energy transitions can lead to large but phenomenologically acceptable density inhomogeneities in soft topological defects (e.g., domain walls) with minimal variations in the microwave anisotropy, as small as delta Y/T less than or approx 10 to the minus 6 power. This mechanism is independent of the existence of hot, cold, or baryonic dark matter. It is a novel alternative to both cosmic string and to inflationary quantum fluctuations as the origin of structure in the Universe.

  12. Nonlinear Waves in the Terrestrial Quasiparallel Foreshock.

    PubMed

    Hnat, B; Kolotkov, D Y; O'Connell, D; Nakariakov, V M; Rowlands, G

    2016-12-02

    We provide strongly conclusive evidence that the cubic nonlinearity plays an important part in the evolution of the large amplitude magnetic structures in the terrestrial foreshock. Large amplitude nonlinear wave trains at frequencies above the proton cyclotron frequency are identified after nonharmonic slow variations are filtered out by applying the empirical mode decomposition. Numerical solutions of the derivative nonlinear Schrödinger equation, predicted analytically by the use of a pseudopotential approach, are found to be consistent with the observed wave forms. The approximate phase speed of these nonlinear waves, indicated by the parameters of numerical solutions, is of the order of the local Alfvén speed. We suggest that the feedback of the large amplitude fluctuations on background plasma is reflected in the evolution of the pseudopotential.

  13. Digital simulation of hybrid loop operation in RFI backgrounds.

    NASA Technical Reports Server (NTRS)

    Ziemer, R. E.; Nelson, D. R.

    1972-01-01

    A digital computer model for Monte-Carlo simulation of an imperfect second-order hybrid phase-locked loop (PLL) operating in radio-frequency interference (RFI) and Gaussian noise backgrounds has been developed. Characterization of hybrid loop performance in terms of cycle slipping statistics and phase error variance, through computer simulation, indicates that the hybrid loop has desirable performance characteristics in RFI backgrounds over the conventional PLL or the costas loop.

  14. Microfluidic-SANS: insitu molecular insight into complex fluid processing and high throughput characterisation

    NASA Astrophysics Data System (ADS)

    Lopez, Carlos; Watanabe, Takaichi; Cabral, Joao; Graham, Peter; Porcar, Lionel; Martel, Anne

    2014-03-01

    The coupling of microfluidics and small angle neutron scattering (SANS) is successfully demonstrated for the first time. We have developed novel microdevices with suitably low SANS background and high pressure compatibility for the investigation of flow-induced phenomena and high throughput phase mapping of complex fluids. We successfully obtained scattering profiles from 50 micron channels, in 10s - 100s second acquisition times. The microfluidic geometry enables the variation of both flow type and magnitude, beyond traditional rheo-SANS setups, and is exceptionally well-suited for complex fluids due to the commensurability of relevant time and lengthscales. We demonstrate our approach by studying model flow responsive systems, including surfactant/co-surfactant/water mixtures, with well-known equilibrium phase behaviour,: sodium dodecyl sulfate (SDS)/octanol/brine, cetyltrimethyl ammonium chloride (C16TAC)/pentanol/water and a model microemulsion system (C10E4 /decane/ D20), as well as polyelectrolyte solutions. Finally, using an online micromixer we are able to implement a high throughput approach, scanning in excess of 10 scattering profiles/min for a continuous aqueous surfactant dilution over two decades in concentration.

  15. Nonlinear climate sensitivity and its implications for future greenhouse warming.

    PubMed

    Friedrich, Tobias; Timmermann, Axel; Tigchelaar, Michelle; Elison Timm, Oliver; Ganopolski, Andrey

    2016-11-01

    Global mean surface temperatures are rising in response to anthropogenic greenhouse gas emissions. The magnitude of this warming at equilibrium for a given radiative forcing-referred to as specific equilibrium climate sensitivity ( S )-is still subject to uncertainties. We estimate global mean temperature variations and S using a 784,000-year-long field reconstruction of sea surface temperatures and a transient paleoclimate model simulation. Our results reveal that S is strongly dependent on the climate background state, with significantly larger values attained during warm phases. Using the Representative Concentration Pathway 8.5 for future greenhouse radiative forcing, we find that the range of paleo-based estimates of Earth's future warming by 2100 CE overlaps with the upper range of climate simulations conducted as part of the Coupled Model Intercomparison Project Phase 5 (CMIP5). Furthermore, we find that within the 21st century, global mean temperatures will very likely exceed maximum levels reconstructed for the last 784,000 years. On the basis of temperature data from eight glacial cycles, our results provide an independent validation of the magnitude of current CMIP5 warming projections.

  16. Nonlinear climate sensitivity and its implications for future greenhouse warming

    PubMed Central

    Friedrich, Tobias; Timmermann, Axel; Tigchelaar, Michelle; Elison Timm, Oliver; Ganopolski, Andrey

    2016-01-01

    Global mean surface temperatures are rising in response to anthropogenic greenhouse gas emissions. The magnitude of this warming at equilibrium for a given radiative forcing—referred to as specific equilibrium climate sensitivity (S)—is still subject to uncertainties. We estimate global mean temperature variations and S using a 784,000-year-long field reconstruction of sea surface temperatures and a transient paleoclimate model simulation. Our results reveal that S is strongly dependent on the climate background state, with significantly larger values attained during warm phases. Using the Representative Concentration Pathway 8.5 for future greenhouse radiative forcing, we find that the range of paleo-based estimates of Earth’s future warming by 2100 CE overlaps with the upper range of climate simulations conducted as part of the Coupled Model Intercomparison Project Phase 5 (CMIP5). Furthermore, we find that within the 21st century, global mean temperatures will very likely exceed maximum levels reconstructed for the last 784,000 years. On the basis of temperature data from eight glacial cycles, our results provide an independent validation of the magnitude of current CMIP5 warming projections. PMID:28861462

  17. Colour and pattern change against visually heterogeneous backgrounds in the tree frog Hyla japonica.

    PubMed

    Kang, Changku; Kim, Ye Eun; Jang, Yikweon

    2016-03-02

    Colour change in animals can be adaptive phenotypic plasticity in heterogeneous environments. Camouflage through background colour matching has been considered a primary force that drives the evolution of colour changing ability. However, the mechanism to which animals change their colour and patterns under visually heterogeneous backgrounds (i.e. consisting of more than one colour) has only been identified in limited taxa. Here, we investigated the colour change process of the Japanese tree frog (Hyla japonica) against patterned backgrounds and elucidated how the expression of dorsal patterns changes against various achromatic/chromatic backgrounds with/without patterns. Our main findings are i) frogs primarily responded to the achromatic differences in background, ii) their contrasting dorsal patterns were conditionally expressed dependent on the brightness of backgrounds, iii) against mixed coloured background, frogs adopted intermediate forms between two colours. Using predator (avian and snake) vision models, we determined that colour differences against different backgrounds yielded perceptible changes in dorsal colours. We also found substantial individual variation in colour changing ability and the levels of dorsal pattern expression between individuals. We discuss the possibility of correlational selection on colour changing ability and resting behaviour that maintains the high variation in colour changing ability within population.

  18. Analytical model for effect of temperature variation on PSF consistency in wavefront coding infrared imaging system

    NASA Astrophysics Data System (ADS)

    Feng, Bin; Shi, Zelin; Zhang, Chengshuo; Xu, Baoshu; Zhang, Xiaodong

    2016-05-01

    The point spread function (PSF) inconsistency caused by temperature variation leads to artifacts in decoded images of a wavefront coding infrared imaging system. Therefore, this paper proposes an analytical model for the effect of temperature variation on the PSF consistency. In the proposed model, a formula for the thermal deformation of an optical phase mask is derived. This formula indicates that a cubic optical phase mask (CPM) is still cubic after thermal deformation. A proposed equivalent cubic phase mask (E-CPM) is a virtual and room-temperature lens which characterizes the optical effect of temperature variation on the CPM. Additionally, a calculating method for PSF consistency after temperature variation is presented. Numerical simulation illustrates the validity of the proposed model and some significant conclusions are drawn. Given the form parameter, the PSF consistency achieved by a Ge-material CPM is better than the PSF consistency by a ZnSe-material CPM. The effect of the optical phase mask on PSF inconsistency is much slighter than that of the auxiliary lens group. A large form parameter of the CPM will introduce large defocus-insensitive aberrations, which improves the PSF consistency but degrades the room-temperature MTF.

  19. Separation of O/X Polarization Modes on Oblique Ionospheric Soundings

    NASA Astrophysics Data System (ADS)

    Harris, T. J.; Cervera, M. A.; Pederick, L. H.; Quinn, A. D.

    2017-12-01

    The oblique-incidence sounder (OIS) is a well-established instrument for determining the state of the ionosphere, with several advantages over vertical-incidence sounders (VIS). However, the processing and interpretation of OIS ionograms is more complicated than that of VIS ionograms. Due to the Earth's magnetic field, the ionosphere is birefringent at radio frequencies and a VIS or OIS will typically see two distinct ionospheric returns, known as the O and X modes. The separation of these two modes on a VIS, using a polarimetric receive antenna, is a well-established technique. However, this process is more complicated on an OIS due to a variable separation in the phase difference between the two modes, as measured between the two arms of a polarimetric antenna. Using a polarimetric antenna that can be rotated and tilted, we show that this variation in phase separation within an ionogram is caused by the variation in incidence angle, with some configurations leading to greater variation in phase separation. We then develop an algorithm for separating O and X modes in oblique ionograms that can account for the variation in phase separation, and we demonstrate successful separation even in relatively difficult cases. The variation in phase separation can also be exploited to estimate the incident elevation, a technique which may be useful for other applications of HF radio.

  20. Intracultural variation of knowledge about wild plant uses in the Biosphere Reserve Grosses Walsertal (Austria)

    PubMed Central

    2012-01-01

    Background Leading scholars in ethnobiology and ethnomedicine continuously stress the need for moving beyond the bare description of local knowledge and to additionally analyse and theorise about the characteristics and dynamics of human interactions with plants and related local knowledge. Analyses of the variation of local knowledge are thereby perceived as minimal standard. In this study we investigate the distribution and variation of wild plant knowledge in five domains: food, drinks, human medicine, veterinary medicine and customs. We assess relations between the wild plant knowledge of informants and their socio-demographic as well as geographic background. Method Research was conducted in the Biosphere Reserve Grosses Walsertal, Austria. Structured questionnaires were used to inquire wild plant knowledge from 433 informants with varying socio-demographic and geographic background. Children assisted in the data collection. Data was analysed using descriptive statistics and generalized linear models. Results and discussion A majority of respondents is familiar with wild plant uses, however to varying degrees. Knowledge variations depend on the socio-demographic and geographic background of the informants as well as on the domains of knowledge under investigation: women, older informants and homegardeners report more human medicinal applications and applications in drinks than men, younger informants and non-homegardeners; farmers know a greater variety of veterinary medicinal applications than non-farmers; the place of residence relates significantly to food and veterinary uses. Customs are difficult to investigate in standardized matrices. The household-related distribution of work and the general socio-cultural context are especially helpful in order to explain intracultural variation of knowledge in the Grosses Walsertal. Conclusions Research on the intracultural variation of local knowledge exposes cultural characteristics and highlights the cultural embeddedness of local knowledge. The impact of socio-cultural developments on local knowledge may be anticipated from understanding the intracultural variation of knowledge. PMID:22770375

  1. Reproducibility studies for experimental epitope detection in macrophages (EDIM).

    PubMed

    Japink, Dennis; Nap, Marius; Sosef, Meindert N; Nelemans, Patty J; Coy, Johannes F; Beets, Geerard; von Meyenfeldt, Maarten F; Leers, Math P G

    2014-05-01

    We have recently described epitope detection in macrophages (EDIM) by flow cytometry. This is a promising tool for the diagnosis and follow-up of malignancies. However, biological and technical validation is warranted before clinical applicability can be explored. The pre-analytic and analytic phases were investigated. Five different aspects were assessed: blood sample stability, intra-individual variability in healthy persons, intra-assay variation, inter-assay variation and assay transferability. The post-analytic phase was already partly standardized and described in an earlier study. The outcomes in the pre-analytic phase showed that samples are stable for 24h after venipuncture. Biological variation over time was similar to that of serum tumor marker assays; each patient has a baseline value. Intra-assay variation showed good reproducibility, while inter-assay variation showed reproducibility similar to that of to established serum tumor marker assays. Furthermore, the assay showed excellent transferability between analyzers. Under optimal analytic conditions the EDIM method is technically stable, reproducible and transferable. Biological variation over time needs further assessment in future work. Copyright © 2014 Elsevier B.V. All rights reserved.

  2. On the Limitations of Variational Bias Correction

    NASA Technical Reports Server (NTRS)

    Moradi, Isaac; Mccarty, Will; Gelaro, Ronald

    2018-01-01

    Satellite radiances are the largest dataset assimilated into Numerical Weather Prediction (NWP) models, however the data are subject to errors and uncertainties that need to be accounted for before assimilating into the NWP models. Variational bias correction uses the time series of observation minus background to estimate the observations bias. This technique does not distinguish between the background error, forward operator error, and observations error so that all these errors are summed up together and counted as observation error. We identify some sources of observations errors (e.g., antenna emissivity, non-linearity in the calibration, and antenna pattern) and show the limitations of variational bias corrections on estimating these errors.

  3. Motor and cognitive performances of parkinsonian patients in the on and off phases of the disease.

    PubMed Central

    Girotti, F; Carella, F; Grassi, M P; Soliveri, P; Marano, R; Caraceni, T

    1986-01-01

    Twenty-one Parkinsonian patients were tested in on and off phases during chronic levodopa therapy for cognitive function, affective status, and evaluation of motor performance with reaction and movement times. A worsening of mood was observed from the on to the off phase. No variation in cognitive performance was observed from the on to the off phase in spite of evident motor changes. Mood changes during on-off variations may reflect involvement of mesocortical and mesolimbic dopaminergic systems. PMID:3734822

  4. In situ Observations of Magnetosonic Waves Modulated by Background Plasma Density

    NASA Astrophysics Data System (ADS)

    Yu, X.; Yuan, Z.; Huang, S.; Wang, D.; Funsten, H. O.

    2017-12-01

    We report in situ observations by the Van Allen Probe mission that magnetosonic (MS) waves are clearly relevant to appear relevant to the background plasma number density. As the satellite moved across dense and tenuous plasma alternatively, MS waves occurred only in lower density region. As the observed protons with 'ring' distributions provide free energy, local linear growth rates are calculated and show that magnetosonic waves can be locally excited in tenuous plasma. With variations of the background plasma density, the temporal variations of local wave growth rates calculated with the observed proton ring distributions, show a remarkable agreement with those of the observed wave amplitude. Therefore, the paper provides a direct proof that background plasma densities can modulate the amplitudes of magnetosonic waves through controlling the wave growth rates.

  5. Measurement of EUV lithography pupil amplitude and phase variation via image-based methodology

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Levinson, Zachary; Verduijn, Erik; Wood, Obert R.

    2016-04-01

    Here, an approach to image-based EUV aberration metrology using binary mask targets and iterative model-based solutions to extract both the amplitude and phase components of the aberrated pupil function is presented. The approach is enabled through previously developed modeling, fitting, and extraction algorithms. We seek to examine the behavior of pupil amplitude variation in real-optical systems. Optimized target images were captured under several conditions to fit the resulting pupil responses. Both the amplitude and phase components of the pupil function were extracted from a zone-plate-based EUV mask microscope. The pupil amplitude variation was expanded in three different bases: Zernike polynomials,more » Legendre polynomials, and Hermite polynomials. It was found that the Zernike polynomials describe pupil amplitude variation most effectively of the three.« less

  6. Lipopolysaccharide variation in Coxiella burnetti: intrastrain heterogeneity in structure and antigenicity.

    PubMed Central

    Hackstadt, T; Peacock, M G; Hitchcock, P J; Cole, R L

    1985-01-01

    We isolated lipopolysaccharides (LPSs) from phase variants of Coxiella burnetii Nine Mile and compared the isolated LPS and C. burnetii cells by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and immunoblotting. The LPSs were found to be the predominant component which varied structurally and antigenically between virulent phase I and avirulent phase II. A comparison of techniques historically used to extract the phase I antigenic component revealed that the aqueous phase of phenol-water, trichloroacetic acid, and dimethyl sulfoxide extractions of phase I C. burnettii cells all contained phase I LPS, although the efficiency and specificity of extraction varied. Our studies provide additional evidence that phase variation in C. burnetii is analogous to the smooth-to-rough LPS variation of gram-negative enteric bacteria, with phase I LPS being equivalent to smooth LPS and phase II being equivalent to rough LPS. In addition, we identified a variant with a third LPS chemotype with appears to have a structural complexity intermediate to phase I and II LPSs. All three C. burnetii LPS contain a 2-keto-3-deoxyoctulosonic acid-like substance, heptose, and gel Limulus amoebocyte lysates in subnanogram amounts. The C. burnetii LPSs were nontoxic to chicken embryos at doses of over 80 micrograms per embryo, in contrast to Salmonella typhimurium smooth- and rough-type LPSs, which were toxic in nanogram amounts. Images PMID:3988339

  7. Holographic cosmology and phase transitions of SYM theory

    NASA Astrophysics Data System (ADS)

    Ghoroku, Kazuo; Meyer, René; Toyoda, Fumihiko

    2017-10-01

    We study the time development of strongly coupled N =4 supersymmetric Yang Mills (SYM) theory on cosmological Friedmann-Robertson-Walker (FRW) backgrounds via the AdS/CFT correspondence. We implement the cosmological background as a boundary metric fulfilling the Friedmann equation with a four-dimensional cosmological constant and a dark radiation term. We analyze the dual bulk solution of the type IIB supergravity and find that the time dependence of the FRW background strongly influences the dynamical properties of the SYM theory. We in particular find a phase transition between a confined and a deconfined phase. We also argue that some cosmological solutions could be related to the inflationary scenario.

  8. Eco-geographical diversification of bitter taste receptor genes (TAS2Rs) among subspecies of chimpanzees (Pan troglodytes).

    PubMed

    Hayakawa, Takashi; Sugawara, Tohru; Go, Yasuhiro; Udono, Toshifumi; Hirai, Hirohisa; Imai, Hiroo

    2012-01-01

    Chimpanzees (Pan troglodytes) have region-specific difference in dietary repertoires from East to West across tropical Africa. Such differences may result from different genetic backgrounds in addition to cultural variations. We analyzed the sequences of all bitter taste receptor genes (cTAS2Rs) in a total of 59 chimpanzees, including 4 putative subspecies. We identified genetic variations including single-nucleotide variations (SNVs), insertions and deletions (indels), gene-conversion variations, and copy-number variations (CNVs) in cTAS2Rs. Approximately two-thirds of all cTAS2R haplotypes in the amino acid sequence were unique to each subspecies. We analyzed the evolutionary backgrounds of natural selection behind such diversification. Our previous study concluded that diversification of cTAS2Rs in western chimpanzees (P. t. verus) may have resulted from balancing selection. In contrast, the present study found that purifying selection dominates as the evolutionary form of diversification of the so-called human cluster of cTAS2Rs in eastern chimpanzees (P. t. schweinfurthii) and that the other cTAS2Rs were under no obvious selection as a whole. Such marked diversification of cTAS2Rs with different evolutionary backgrounds among subspecies of chimpanzees probably reflects their subspecies-specific dietary repertoires.

  9. Eco-Geographical Diversification of Bitter Taste Receptor Genes (TAS2Rs) among Subspecies of Chimpanzees (Pan troglodytes)

    PubMed Central

    Hayakawa, Takashi; Sugawara, Tohru; Go, Yasuhiro; Udono, Toshifumi; Hirai, Hirohisa; Imai, Hiroo

    2012-01-01

    Chimpanzees (Pan troglodytes) have region-specific difference in dietary repertoires from East to West across tropical Africa. Such differences may result from different genetic backgrounds in addition to cultural variations. We analyzed the sequences of all bitter taste receptor genes (cTAS2Rs) in a total of 59 chimpanzees, including 4 putative subspecies. We identified genetic variations including single-nucleotide variations (SNVs), insertions and deletions (indels), gene-conversion variations, and copy-number variations (CNVs) in cTAS2Rs. Approximately two-thirds of all cTAS2R haplotypes in the amino acid sequence were unique to each subspecies. We analyzed the evolutionary backgrounds of natural selection behind such diversification. Our previous study concluded that diversification of cTAS2Rs in western chimpanzees (P. t. verus) may have resulted from balancing selection. In contrast, the present study found that purifying selection dominates as the evolutionary form of diversification of the so-called human cluster of cTAS2Rs in eastern chimpanzees (P. t. schweinfurthii) and that the other cTAS2Rs were under no obvious selection as a whole. Such marked diversification of cTAS2Rs with different evolutionary backgrounds among subspecies of chimpanzees probably reflects their subspecies-specific dietary repertoires. PMID:22916235

  10. On the variability of LSI+61 deg 303 (identical with GT 0236)

    NASA Technical Reports Server (NTRS)

    Tanzi, E. G.; Bignami, G. F.; Caraveo, P. A.; Maraschi, L.; Sormani, F.; Treves, A.

    1982-01-01

    Out of six long and six short wavelength observations, one spectrum exhibits a significant photometric variation: or approximately 20%. Interpreting the continuum as due to superposition of an early B main sequence star plus a gaseous component contributing at lambda 2000 A, the wavelength dependence of the variation suggests that it derives from the latter component. The data indicate that if the observed variation is phase dependent, a minimum should occur between phases 0.8 and 0.2. However, since the variation is observed in only one spectrum, it may well be erratic.

  11. Influence of patchy saturation on seismic dispersion and attenuation in fractured porous media

    NASA Astrophysics Data System (ADS)

    Jinwei, Zhang; Handong, Huang; Chunhua, Wu; Sheng, Zhang; Gang, Wu; Fang, Chen

    2018-04-01

    Wave induced fluid flow due to mesoscopic heterogeneity can explain seismic dispersion and attenuation in the seismic frequency band. The mesoscopic heterogeneity mainly contains lithological variations, patchy saturation and mesoscopic fractures. The patchy saturation models which are locally based on Biot theory for porous media have been deeply studied, but the patchy saturation model for fractured porous media is rarely studied. In this paper, we develop a model to describe the poroelastic characteristics in fractured porous media where the background and fractures are filled with different fluids based on two scales of squirt flow. The seismic dispersion and attenuation in fractured porous media occur in two scales, the microscale due to fluid flow between pores and micro-cracks and mesoscale due to fluid flow between background and heterogeneities. We derive the complex stiffness tensor through the solution of stress equivalence and fluid conservation. Two new parameters embodying the fluid effects are introduced into the model compared with the single fluid phase model. The model is consistent with Gassmann-Wood equation at low frequency limit and consistent with the isolated fracture model at high frequency limit. After the frequency dependent stiffness tensor is obtained, the variations of velocities and inverse quality factors with frequency are analyzed through several numerical examples. We investigated three poroelastic cases: medium including pores and micro-cracks, media including pores, micro-cracks and fractures, media including pores and fractures. The frequency dependent characteristics of patchy saturation model are different with those of single fluid model not only in characteristic frequency but also in the magnitude of the attenuation. Finally, we discuss the results obtained and the special case where the fractures are saturated with gas or dry and the background is filled with water. We also compare our results with those of patchy saturation model and double porosity model. The results will contribute to the actual exploration work to a certain extent, such as the fluid identification in fractured reservoirs.

  12. Influence of patchy saturation on seismic dispersion and attenuation in fractured porous media

    NASA Astrophysics Data System (ADS)

    Zhang, Jinwei; Huang, Handong; Wu, Chunhua; Zhang, Sheng; Wu, Gang; Chen, Fang

    2018-07-01

    Wave-induced fluid flow due to mesoscopic heterogeneity can explain seismic dispersion and attenuation in the seismic frequency band. The mesoscopic heterogeneity mainly contains lithological variations, patchy saturation and mesoscopic fractures. The patchy saturation models which are locally based on Biot theory for porous media have been deeply studied, but the patchy saturation model for fractured porous media is rarely studied. In this paper, we develop a model to describe the poroelastic characteristics in fractured porous media where the background and fractures are filled with different fluids based on two scales of squirt flow. The seismic dispersion and attenuation in fractured porous media occur in two scales, the microscale due to fluid flow between pores and microcracks and mesoscale due to fluid flow between background and heterogeneities. We derive the complex stiffness tensor through the solution of stress equivalence and fluid conservation. Two new parameters embodying the fluid effects are introduced into the model compared with the single fluid phase model. The model is consistent with Gassmann-Wood equation at low-frequency limit and consistent with the isolated fracture model at high-frequency limit. After the frequency-dependent stiffness tensor is obtained, the variations of velocities and inverse quality factors with frequency are analysed through several numerical examples. We investigated three poroelastic cases: medium including pores and microcracks; media including pores, microcracks and fractures; media including pores and fractures. The frequency-dependent characteristics of patchy saturation model are different with those of single fluid model not only in characteristic frequency but also in the magnitude of the attenuation. Finally, we discuss the results obtained and the special case where the fractures are saturated with gas or dry and the background is filled with water. We also compare our results with those of patchy saturation model and double porosity model. The results will contribute to the actual exploration work to a certain extent, such as the fluid identification in fractured reservoirs.

  13. Phase Variation Analysis of Coxiella burnetii during Serial Passage in Cell Culture by Use of Monoclonal Antibodies

    PubMed Central

    Hotta, Akitoyo; Kawamura, Midori; To, Ho; Andoh, Masako; Yamaguchi, Tsuyoshi; Fukushi, Hideto; Hirai, Katsuya

    2002-01-01

    Antigenic changes in Coxiella burnetii Nine Mile strain phase I during serial passages in cell culture were analyzed with three groups of monoclonal antibodies (MAbs) against lipopolysaccharide. The MAbs of group 1 did not react with organisms that were passaged over five times, and the MAbs of group 2 did not react with organisms that were passaged over eight times. The MAbs of group 3 reacted with organisms passaged up to 15 times but did not react with phase II cells. These results suggest that C. burnetii could be differentiated into four phase states during phase variation. PMID:12117996

  14. Three filters for visualization of phase objects with large variations of phase gradients

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sagan, Arkadiusz; Antosiewicz, Tomasz J.; Szoplik, Tomasz

    2009-02-20

    We propose three amplitude filters for visualization of phase objects. They interact with the spectra of pure-phase objects in the frequency plane and are based on tangent and error functions as well as antisymmetric combination of square roots. The error function is a normalized form of the Gaussian function. The antisymmetric square-root filter is composed of two square-root filters to widen its spatial frequency spectral range. Their advantage over other known amplitude frequency-domain filters, such as linear or square-root graded ones, is that they allow high-contrast visualization of objects with large variations of phase gradients.

  15. Cable delay compensator for microwave signal distribution over optical fibers

    NASA Astrophysics Data System (ADS)

    Primas, Lori E.

    1990-12-01

    The basic principles of microwave fiber-optic systems are outlined with emphasis on fiber-optic cable delay compensators (CDC). Degradation of frequency and phase stability is considered, and it is pointed out that the long-term stability of a fiber-optic link is degraded by group delay variations due to temperature fluctuations in the optical fiber and low-frequency noise characteristics of the laser. A CDC employing a voltage-controlled oscillator to correct for phase variations in the optical fiber is presented, and the static as well as dynamic closed-loop analyses of the fiber-optic CDC are discussed. A constructed narrow-band fiber-optic CDC is shown to reduce phase variations caused by temperature fluctuations by a factor of 400. A wide-band CDC utilizing a temperature-controlled coil of fiber to compensate for phase delay is also proposed.

  16. Effect of water phase transition on dynamic ruptures with thermal pressurization: Numerical simulations with changes in physical properties of water

    NASA Astrophysics Data System (ADS)

    Urata, Yumi; Kuge, Keiko; Kase, Yuko

    2015-02-01

    Phase transitions of pore water have never been considered in dynamic rupture simulations with thermal pressurization (TP), although they may control TP. From numerical simulations of dynamic rupture propagation including TP, in the absence of any water phase transition process, we predict that frictional heating and TP are likely to change liquid pore water into supercritical water for a strike-slip fault under depth-dependent stress. This phase transition causes changes of a few orders of magnitude in viscosity, compressibility, and thermal expansion among physical properties of water, thus affecting the diffusion of pore pressure. Accordingly, we perform numerical simulations of dynamic ruptures with TP, considering physical properties that vary with the pressure and temperature of pore water on a fault. To observe the effects of the phase transition, we assume uniform initial stress and no fault-normal variations in fluid density and viscosity. The results suggest that the varying physical properties decrease the total slip in cases with high stress at depth and small shear zone thickness. When fault-normal variations in fluid density and viscosity are included in the diffusion equation, they activate TP much earlier than the phase transition. As a consequence, the total slip becomes greater than that in the case with constant physical properties, eradicating the phase transition effect. Varying physical properties do not affect the rupture velocity, irrespective of the fault-normal variations. Thus, the phase transition of pore water has little effect on dynamic ruptures. Fault-normal variations in fluid density and viscosity may play a more significant role.

  17. Seafloor age dependence of Rayleigh wave phase velocities in the Indian Ocean

    NASA Astrophysics Data System (ADS)

    Godfrey, Karen E.; Dalton, Colleen A.; Ritsema, Jeroen

    2017-05-01

    Variations in the phase velocity of fundamental-mode Rayleigh waves across the Indian Ocean are determined using two inversion approaches. First, variations in phase velocity as a function of seafloor age are estimated using a pure-path age-dependent inversion method. Second, a two-dimensional parameterization is used to solve for phase velocity within 1.25° × 1.25° grid cells. Rayleigh wave travel time delays have been measured between periods of 38 and 200 s. The number of measurements in the study area ranges between 4139 paths at a period of 200 s and 22,272 paths at a period of 40 s. At periods < 100 s, the phase velocity variations are strongly controlled by seafloor age and shown to be consistent with temperature variations predicted by the half-space-cooling model for a mantle potential temperature of 1400°C. The inferred thermal structure beneath the Indian Ocean is most similar to the structure of the Pacific upper mantle, where phase velocities can also be explained by a half-space-cooling model. The thermal structure is not consistent with that of the Atlantic upper mantle, which is best fit by a plate-cooling model and requires a thin plate. Removing age-dependent phase velocity from the 2-D maps of the Indian Ocean highlights anomalously high velocities at the Rodriguez Triple Junction and the Australian-Antarctic Discordance and anomalously low velocities immediately to the west of the Central Indian Ridge.

  18. Mitigation of ^{42}Ar/^{42}K background for the GERDA Phase II experiment

    NASA Astrophysics Data System (ADS)

    Lubashevskiy, A.; Agostini, M.; Budjáš, D.; Gangapshev, A.; Gusev, K.; Heisel, M.; Klimenko, A.; Lazzaro, A.; Lehnert, B.; Pelczar, K.; Schönert, S.; Smolnikov, A.; Walter, M.; Zuzel, G.

    2018-01-01

    Background coming from the ^{42}Ar decay chain is considered to be one of the most relevant for the Gerda experiment, which searches for the neutrinoless double beta decay of ^{76}Ge. The sensitivity strongly relies on the absence of background around the Q-value of the decay. Background coming from ^{42}K, a progeny of ^{42}Ar, can contribute to that background via electrons from the continuous spectrum with an endpoint at 3.5 MeV. Research and development on the suppression methods targeting this source of background were performed at the low-background test facility LArGe . It was demonstrated that by reducing ^{42}K ion collection on the surfaces of the broad energy germanium detectors in combination with pulse shape discrimination techniques and an argon scintillation veto, it is possible to suppress ^{42}K background by three orders of magnitude. This is sufficient for Phase II of the Gerda experiment.

  19. Seasonal and diurnal variation in concentrations of gaseous and particulate phase endosulfan

    NASA Astrophysics Data System (ADS)

    Li, Qingbo; Wang, Xianyu; Song, Jing; Sui, Hongqi; Huang, Lei; Li, Lu

    2012-12-01

    Successive 52-week air monitoring of α-endosulfan (α-E), β-endosulfan (β-E) and endosulfan sulfate (E.S) in the gaseous and particulate phases was conducted in Dalian city, northeast China by using an active high-volume sampler. Significant seasonal and diurnal variations in endosulfan concentrations were observed. It was found that the concentration of gaseous-phase α-E peaked in the summer and the concentration of particulate phase α-E peaked in the winter. For E.S, both gaseous and particulate phase concentrations peaked in the summer. α-E was distributed predominantly in the gas phase in the summer but was distributed mainly in the particulate phase in the winter. β-E was distributed mainly in the gas phase in the summer and in the particulate phase at other times of the year. E.S was distributed mainly in the particulate phase throughout the year. Elevated temperatures facilitated the volatilization of α-E from particle surfaces but exerted little effect on β-E and had almost no effect on E.S. Trajectory-based analysis indicates that the seasonal variation in atmospheric concentrations of endosulfan in Dalian city was influenced strongly by the land and sea air masses. In addition, differences in endosulfan concentrations in the particulate phase between day and night were likely due to the circulation of sea/land breezes. The 'cold-condensation' effect occurring during the night may result in the attachment of endosulfan to the particulate phase.

  20. Menstrual Cycle Effects on Perceived Exertion and Pain During Exercise Among Sedentary Women

    PubMed Central

    Bryan, Angela D.; Eaton, Melissa

    2011-01-01

    Abstract Background Increasing cardiovascular fitness through exercise participation among sedentary people is important for decreasing all-cause mortality. From an intervention perspective, identifying modifiable factors that maximize the successful initiation of exercise is of utmost importance. For women, cyclic hormonal variations can influence aspects of health and health behaviors, from smoking cessation efficacy to physiological responses to exercise. The purpose of this study was to examine the influence of menstrual cycle phase and hormonal contraceptive (HC) use on subjective response to an initial bout of moderate intensity exercise among previously sedentary women (n = 117). Methods Women completed a treadmill exercise challenge session at 65% of their previously determined maximum oxygen consumption (Vo2 max) during the early follicular, late follicular, or luteal phase. Participants reported ratings of perceived exertion and pain using Borg's Rating of Perceived Exertion (RPE) and CR10 scales at 10, 20, and 30 minutes during the exercise session. Results There was a significant menstrual phase × birth control interaction on change in RPE [F(2, 111) = 3.75, p < 0.05] and change in perceived pain [F(2, 110) = 3.31, p < 0.05]. Women in the early follicular phase who were not using HCs had significantly greater increases in RPE and increases in pain compared with women in the late follicular and luteal phases. Conclusions Our results indicate that the use of HC and cycle phase influence sedentary women's subjective response to exercise. These results have important implications for the timing of exercise interventions aimed at increasing exercise among sedentary women. PMID:21219246

  1. Paternal epigenetic effects of population density on locust phase-related characteristics associated with heat-shock protein expression.

    PubMed

    Chen, Bing; Li, Shaoqin; Ren, Qiang; Tong, Xiwen; Zhang, Xia; Kang, Le

    2015-02-01

    Many species exhibit transgenerational plasticity by which environmental cues experienced by either parent can be transmitted to their offspring, resulting in phenotypic variants in offspring to match ancestral environments. However, the manner by which paternal experiences affect offspring plasticity through epigenetic inheritance in animals generally remains unclear. In this study, we examined the transgenerational effects of population density on phase-related traits in the migratory locust Locusta migratoria. Using an experimental design that explicitly controls genetic background, we found that the effects of crowd or isolation rearing on phase plasticity could be inherited to the offspring. The isolation of gregarious locusts resulted in reduced weight in offspring eggs and altered morphometric traits in hatchlings, whereas crowding of solitarious locusts exhibited opposite effects. The consequences of density changes were transmitted by both maternal and paternal inheritance, although the expression of paternal effects was not as pronounced as that of maternal effects. Prominent expression of heat-shock proteins (Hsps), such as Hsp90, Hsp70 and Hsp20.6, could be triggered by density changes. Hsps were significantly upregulated upon crowding but downregulated upon isolation. The variation in parental Hsp expression was also transmitted to the offspring, in which the pattern of inheritance was consistent with that of phase characteristics. These results revealed a paternal effect on phase polyphenism and Hsp expression induced by population density, and defined a model system that could be used to study the paternal epigenetic inheritance of environmental changes. © 2015 John Wiley & Sons Ltd.

  2. A new stylolite classification scheme to estimate compaction and local permeability variations

    NASA Astrophysics Data System (ADS)

    Koehn, D.; Rood, M. P.; Beaudoin, N.; Chung, P.; Bons, P. D.; Gomez-Rivas, E.

    2016-12-01

    We modeled the geometrical roughening of bedding-parallel, mainly layer-dominated stylolites in order to understand their structural evolution, to present an advanced classification of stylolite shapes and to relate this classification to chemical compaction and permeability variations at stylolites. Stylolites are rough dissolution seams that develop in sedimentary basins during chemical compaction. In the Zechstein 2 carbonate units, an important lean gas reservoir in the southern Permian Zechstein basin in Germany, stylolites influence local fluid flow, mineral replacement reactions and hence the permeability of the reservoir. Our simulations demonstrate that layer-dominated stylolites can grow in three distinct stages: an initial slow nucleation phase, a fast layer-pinning phase and a final freezing phase if the layer is completely dissolved during growth. Dissolution of the pinning layer and thus destruction of the stylolite's compaction tracking capabilities is a function of the background noise in the rock and the dissolution rate of the layer itself. Low background noise needs a slower dissolving layer for pinning to be successful but produces flatter teeth than higher background noise. We present an advanced classification based on our simulations and separate stylolites into four classes: (1) rectangular layer type, (2) seismogram pinning type, (3) suture/sharp peak type and (4) simple wave-like type. Rectangular layer type stylolites are the most appropriate for chemical compaction estimates because they grow linearly and record most of the actual compaction (up to 40 mm in the Zechstein example). Seismogram pinning type stylolites also provide good tracking capabilities, with the largest teeth tracking most of the compaction. Suture/sharp peak type stylolites grow in a non-linear fashion and thus do not record most of the actual compaction. However, when a non-linear growth law is used, the compaction estimates are similar to those making use of the rectangular layer type stylolites. Simple wave-like stylolites are not useful for compaction estimates, since their growth is highly non-linear with a very low growth exponent. In the case where sealing material is collected at the tooth during dissolution, stylolites can act as barriers for local fluid flow as they intensify sealing capabilities of pinning layers. However, the development of teeth and spikes offsets and thus destroys continuous stylolite seams so that the permeability across the stylolite becomes very heterogeneous and they are no continuous barriers. This behavior is best shown in rectangular layer and seismogram pinning type stylolites that develop efficient fluid barriers at teeth tips but destroy sealing capabilities of layers by offsetting them at the flank, leading to a permeability anisotropy along 2-D stylolite planes. Suture/sharp peak stylolites can create fluid barriers if they collect enough sealing material. However, if the collecting material does not seal or if spikes offset the sealing material the stylolite leaks. We propose that our classification can be used to realistically estimate chemical compaction in reservoirs and gives an indication on how heterogeneous the permeability of stylolites can be.

  3. First results from GERDA Phase II

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Allardt, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Belyaev, S. T.; Benato, G.; Bettini, A.; Bezrukov, L.; Bode, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; Di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Frodyma, N.; Gangapshev, A.; Garfagnini, A.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Janicskó Csáthy, J.; Jochum, J.; Junker, M.; Kazalov, V.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Lehnert, B.; Liao, H. Y.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Medinaceli, E.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Palioselitis, D.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Salathe, M.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schulz, O.; Schütz, A.-K.; Schwingenheuer, B.; Selivanenko, O.; Shevchik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zuber, K.; Zuzel, G.

    2017-09-01

    Gerda is designed for a background-free search of 76Ge neutrinoless double-β decay, using bare Ge detectors in liquid Ar. The experiment was upgraded after the successful completion of Phase I to double the target mass and further reduce the background. Newly-designed Ge detectors were installed along with LAr scintillation sensors. Phase II of data-taking started in Dec 2015 with approximately 36 kg of Ge detectors and is currently ongoing. The first results based on 10.8 kg· yr of exposure are presented. The background goal of 10-3 cts/(keV· kg· yr) is achieved and a search for neutrinoless double-β decay is performed by combining Phase I and II data. No signal is found and a new limit is set at T1/20ν > 5.3 \\cdot {1025} yr (90% C.L.).

  4. Volcanic tremor and frequency gliding during dike intrusions at Kı¯lauea—A tale of three eruptions

    NASA Astrophysics Data System (ADS)

    Unglert, K.; Jellinek, A. M.

    2015-02-01

    To characterize syneruptive/intrusive deviations from background volcanic tremor at Kı¯lauea, Hawai`i, we analyze the spatial and temporal properties of broadband tremor during dike intrusions into the East Rift Zone (ERZ) in 2007 and 2011, as well as during explosive eruptive activity at Kı¯lauea's summit in 2008. Background tremor was similar for each event, and the 2008 explosions did not affect its properties. In contrast, the intrusions were accompanied by departures from this background in the form of two phases of seismicity that were separated in space and time. In both 2007 and 2011, Phase I was characterized by a quick succession of discrete events, which were most intense at the onset of intrusion near the presumed locations of the dikes intruding into the ERZ. Phase II, marked by continuous broadband tremor around the summit, followed 10-14 h later. In 2007, Phase II tremor was accompanied by a monotonic downward shift (glide) of spectral peaks between ˜0.6 and 1.5 Hz over at least 15 h. During Phase II in 2011, a gradual upward and subsequent symmetric downward glide between ˜0.6 and 6.6 Hz occurred over 5-10 h, respectively. The spectra during both phases differed from the background and 2008, as well as from each other, indicating different physical mechanisms. Phase I in 2007 and 2011 is probably related to the mechanics of dike intrusion. Phase II tremor may be characteristic for evolving magma-bubble dynamics related to the geometry of the plumbing system and the style of magma flow.

  5. Colour and pattern change against visually heterogeneous backgrounds in the tree frog Hyla japonica

    PubMed Central

    Kang, Changku; Kim, Ye Eun; Jang, Yikweon

    2016-01-01

    Colour change in animals can be adaptive phenotypic plasticity in heterogeneous environments. Camouflage through background colour matching has been considered a primary force that drives the evolution of colour changing ability. However, the mechanism to which animals change their colour and patterns under visually heterogeneous backgrounds (i.e. consisting of more than one colour) has only been identified in limited taxa. Here, we investigated the colour change process of the Japanese tree frog (Hyla japonica) against patterned backgrounds and elucidated how the expression of dorsal patterns changes against various achromatic/chromatic backgrounds with/without patterns. Our main findings are i) frogs primarily responded to the achromatic differences in background, ii) their contrasting dorsal patterns were conditionally expressed dependent on the brightness of backgrounds, iii) against mixed coloured background, frogs adopted intermediate forms between two colours. Using predator (avian and snake) vision models, we determined that colour differences against different backgrounds yielded perceptible changes in dorsal colours. We also found substantial individual variation in colour changing ability and the levels of dorsal pattern expression between individuals. We discuss the possibility of correlational selection on colour changing ability and resting behaviour that maintains the high variation in colour changing ability within population. PMID:26932675

  6. Phenotypic variation of Pseudomonas brassicacearum as a plant root-colonization strategy.

    PubMed

    Achouak, Wafa; Conrod, Sandrine; Cohen, Valérie; Heulin, Thierry

    2004-08-01

    Pseudomonas brassicacearum was isolated as a major root-colonizing population from Arabidopsis thaliana. The strain NFM421 of P. brassicacearum undergoes phenotypic variation during A. thaliana and Brassica napus root colonization in vitro as well as in soil, resulting in different colony appearance on agar surfaces. Bacteria forming translucent colonies (phase II cells) essentially were localized at the surface of young roots and root tips, whereas wild-type cells (phase I cells) were localized at the basal part of roots. The ability of phase II cells to spread and colonize new sites on root surface correlates with over-production of flagellin as evidenced by sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis of surface proteins and microsequencing. Moreover, phase II cells showed a higher ability to swim and to swarm on semisolid agar medium. Phase I and phase II cells of P. brassicacearum NFM421 were tagged genetically with green fluorescent protein and red fluorescent protein. Confocal scanning laser microscopy was used to localize phase II cells on secondary roots and root tips of A. thaliana, whereas phase I cells essentially were localized at the basal part of roots. These experiments were conducted in vitro and in soil. Phenotypic variation on plant roots is likely to be a colonization strategy that may explain the high colonization power of P. brassicacearum.

  7. MAVEN Observations of Solar Wind-Driven Magnetosonic Waves Heating the Martian Dayside Ionosphere

    NASA Astrophysics Data System (ADS)

    Fowler, C. M.; Andersson, L.; Ergun, R. E.; Harada, Y.; Hara, T.; Collinson, G.; Peterson, W. K.; Espley, J.; Halekas, J.; Mcfadden, J.; Mitchell, D. L.; Mazelle, C.; Benna, M.; Jakosky, B. M.

    2018-05-01

    We present Mars Atmosphere and Volatile EvolutioN observations of large-amplitude magnetosonic waves propagating through the magnetosheath into the Martian ionosphere near the subsolar point on the dayside of the planet. The observed waves grow in amplitude as predicted for a wave propagating into a denser, charged medium, with wave amplitudes reaching 25 nT, equivalent to ˜40% of the background field strength. These waves drive significant density and temperature variations (˜20% to 100% in amplitude) in the suprathermal electrons and light ion species (H+) that correlate with compressional fronts of the magnetosonic waves. Density and temperature variations are also observed for the ionospheric electrons, and heavy ion species (O+ and O2+); however, these variations are not in phase with the magnetic field variations. Whistler waves are observed at compressional wave fronts and are thought to be produced by unstable, anistropic suprathermal electrons. The magnetosonic waves drive significant ion and electron heating down to just above the exobase region. Ion heating rates are estimated to be between 0.03 and 0.2 eVs-1 per ion, and heavier ions could thus gain escape energy if located in this heating region for ˜10-70 s. The measured ionospheric density profile indicates severe ionospheric erosion above the exobase region, and this is likely caused by substantial ion outflow that is driven by the observed heating. The effectiveness of these magnetosonic waves to energize the plasma close to the exobase could have important implications for the long-term climate evolution for unmagnetized bodies that are exposed to the solar wind.

  8. Biomarker-Guided Adaptive Trial Designs in Phase II and Phase III: A Methodological Review

    PubMed Central

    Antoniou, Miranta; Jorgensen, Andrea L; Kolamunnage-Dona, Ruwanthi

    2016-01-01

    Background Personalized medicine is a growing area of research which aims to tailor the treatment given to a patient according to one or more personal characteristics. These characteristics can be demographic such as age or gender, or biological such as a genetic or other biomarker. Prior to utilizing a patient’s biomarker information in clinical practice, robust testing in terms of analytical validity, clinical validity and clinical utility is necessary. A number of clinical trial designs have been proposed for testing a biomarker’s clinical utility, including Phase II and Phase III clinical trials which aim to test the effectiveness of a biomarker-guided approach to treatment; these designs can be broadly classified into adaptive and non-adaptive. While adaptive designs allow planned modifications based on accumulating information during a trial, non-adaptive designs are typically simpler but less flexible. Methods and Findings We have undertaken a comprehensive review of biomarker-guided adaptive trial designs proposed in the past decade. We have identified eight distinct biomarker-guided adaptive designs and nine variations from 107 studies. Substantial variability has been observed in terms of how trial designs are described and particularly in the terminology used by different authors. We have graphically displayed the current biomarker-guided adaptive trial designs and summarised the characteristics of each design. Conclusions Our in-depth overview provides future researchers with clarity in definition, methodology and terminology for biomarker-guided adaptive trial designs. PMID:26910238

  9. Pesticides in the atmosphere: a comparison of gas-particle partitioning and particle size distribution of legacy and current-use pesticides

    NASA Astrophysics Data System (ADS)

    Degrendele, C.; Okonski, K.; Melymuk, L.; Landlová, L.; Kukučka, P.; Audy, O.; Kohoutek, J.; Čupr, P.; Klánová, J.

    2015-09-01

    This study presents a comparison of seasonal variation, gas-particle partitioning and particle-phase size distribution of organochlorine pesticides (OCPs) and current-use pesticides (CUPs) in air. Two years (2012/2013) of weekly air samples were collected at a background site in the Czech Republic using a high-volume air sampler. To study the particle-phase size distribution, air samples were also collected at an urban and rural site in the area of Brno, Czech Republic, using a cascade impactor separating atmospheric particulates according to six size fractions. The timing and frequencies of detection of CUPs related to their legal status, usage amounts and their environmental persistence, while OCPs were consistently detected throughout the year. Two different seasonal trends were noted: certain compounds had higher concentrations only during the growing season (April-September) and other compounds showed two peaks, first in the growing season and second in plowing season (October-November). In general, gas-particle partitioning of pesticides was governed by physicochemical properties, with higher vapor pressure leading to higher gas phase fractions, and associated seasonality in gas-particle partitioning was observed in nine pesticides. However, some anomalous partitioning was observed for fenpropimorph and chlorpyrifos suggesting the influence of current pesticide application on gas-particle distributions. Nine pesticides had highest particle phase concentrations on fine particles (< 0.95 μm) and four pesticides on coarser (> 1.5 μm) particles.

  10. Bipartite life cycle of coral reef fishes promotes increasing shape disparity of the head skeleton during ontogeny: an example from damselfishes (Pomacentridae)

    PubMed Central

    2011-01-01

    Background Quantitative studies of the variation of disparity during ontogeny exhibited by the radiation of coral reef fishes are lacking. Such studies dealing with the variation of disparity, i.e. the diversity of organic form, over ontogeny could be a first step in detecting evolutionary mechanisms in these fishes. The damselfishes (Pomacentridae) have a bipartite life-cycle, as do the majority of demersal coral reef fishes. During their pelagic dispersion phase, all larvae feed on planktonic prey. On the other hand, juveniles and adults associated with the coral reef environment show a higher diversity of diets. Using geometric morphometrics, we study the ontogenetic dynamic of shape disparity of different head skeletal units (neurocranium, suspensorium and opercle, mandible and premaxilla) in this fish family. We expected that larvae of different species might be relatively similar in shapes. Alternatively, specialization may become notable even in the juvenile and adult phase. Results The disparity levels increase significantly throughout ontogeny for each skeletal unit. At settlement, all larval shapes are already species-specific. Damselfishes show high levels of ontogenetic allometry during their post-settlement growth. The divergence of allometric patterns largely explains the changes in patterns and levels of shape disparity over ontogeny. The rate of shape change and the length of ontogenetic trajectories seem to be less variable among species. We also show that the high levels of shape disparity at the adult stage are correlated to a higher level of ecological and functional diversity in this stage. Conclusion Diversification throughout ontogeny of damselfishes results from the interaction among several developmental novelties enhancing disparity. The bipartite life-cycle of damselfishes exemplifies a case where the variation of environmental factors, i.e. the transition from the more homogeneous oceanic environment to the coral reef offering a wide range of feeding habits, promotes increasing shape disparity of the head skeleton over the ontogeny of fishes. PMID:21450094

  11. Neutrinoless double beta decay in Gerda

    NASA Astrophysics Data System (ADS)

    Grabmayr, Peter; Gerda Collaboration

    2015-10-01

    The Germanium Detector Array (Gerda) experiment searches for the neutrinoless double beta decay in 76Ge. This lepton number violating process is predicted by extensions of the standard model. Gerda follows a staged approach by increasing mass and lowering the background level from phase to phase. Gerda is setup at the Gran Sasso underground laboratory of INFN, Italy. An array of high-purity germanium detectors is lowered directly in liquid argon for shielding and cooling. Further background reduction is achieved by an instrumented water buffer. In Phase I an exposure of 21.6 kg yr was collected at a background level of 10-2 cts/(keV kg yr). The lower limit on the half-life of 76Ge > 2 . 1 .1025 yr (90% C.L.) has been published. Further analyses search for decay into excited states or the accompanied Majoron decay. Presently, Phase II is in preparation which intends to reach a background level of 10-3 cts/(keV kg yr) and to increase the exposure to 100 kg yr. About 20 kg of novel thick-window BEGe (Broad Energy Germanium) detectors will be added and the liquid argon will be instrumented. The status of Phase II preparation and results from the commissioning runs will be presented as well as some further results from Phase I.

  12. Inferring the phase of the moon from the color of sunset

    NASA Astrophysics Data System (ADS)

    Thiermann, Ryan; Sweeney, Alison; Murugan, Arvind

    We use information theory to investigate whether patterns in the spectral progression of twilight are informative of the lunar phase. Such optical cues have been sought to explain the synchronized spawning of corals and other biological processes that are coupled to the lunar cycle. We first quantify the maximum available information about lunar phase in twilight by combining measurements of twilight spectrum and models of spectral variations due to weather and atmospheric changes. We then quantify the biophysically accessible information by accounting for the spectral resolution of opsin proteins and the temporal resolution with which organisms can track spectral changes. We find that in most climates, relative spectral variation is a more reliable indicator of lunar phase than intensity variation alone since the former is less affected by cloud cover. We also find that organisms can extract most available information with three distinct opsins and reasonable integration times.

  13. FBG wavelength demodulation based on a radio frequency optical true time delay method.

    PubMed

    Wang, Jin; Zhu, Wanshan; Ma, Chenyuan; Xu, Tong

    2018-06-01

    A new fiber Bragg grating (FBG) wavelength shift demodulation method based on optical true time delay microwave phase detection is proposed. We used a microwave photonic link (MPL) to transport a radio frequency (RF) signal over a dispersion compensation fiber (DCF). The wavelength shift of the FBG will cause the time delay change of the optical carrier that propagates in an optical fiber with chromatic dispersion, which will result in the variation of the RF signal phase. A long DCF was adopted to enlarge the RF signal phase variation. An IQ mixer was used to measure the RF phase variation of the RF signal propagating in the MPL, and the wavelength shift of the FBG can be obtained by the measured RF signal phase variation. The experimental results showed that the wavelength shift measurement resolution is 2 pm when the group velocity dispersion of the DCF is 79.5 ps/nm and the frequency of the RF signal is 18 GHz. The demodulation time is as short as 0.1 ms. The measurement resolution can be improved simply by using a higher frequency of the RF signal and a longer DCF or larger chromatic dispersion value of the DCF.

  14. Genetical Analysis of Chromosomal Interaction Effects on the Activities of the Glucose 6-Phosphate and 6-Phosphogluconate Dehydrogenases in DROSOPHILA MELANOGASTER

    PubMed Central

    Miyashita, Naohiko; Laurie-Ahlberg, C. C.

    1984-01-01

    By combining ten second and ten third chromosomes, we investigated chromosomal interaction with respect to the action of the modifier factors on G6PD and 6PGD activities in Drosophila melanogaster. Analysis of variance revealed that highly significant chromosomal interaction exists for both enzyme activities. From the estimated variance components, it was concluded that the variation in enzyme activity attributed to the interaction is as great as the variation attributed to the second chromosome but less than attributed to the third chromosome. The interaction is not explained by the variation of body size (live weight). The interaction is generated from both the lack of correlation of second chromosomes for third chromosome backgrounds and the heterogeneous variance of second chromosomes for different third chromosome backgrounds. Large and constant correlation between G6PD and 6PGD activities were found for third chromosomes with any second chromosome background, whereas the correlations for second chromosomes were much smaller and varied considerably with the third chromosome background. This result suggests that the activity modifiers on the second chromosome are under the influence of third chromosome factors. PMID:6425115

  15. Diffraction Effects in the SOFIA Telescope and Cavity Door

    NASA Astrophysics Data System (ADS)

    Erickson, E. F.; Haas, M. R.; Davis, P. K.

    2005-12-01

    Calculations of diffraction phenomena for SOFIA (the Stratospheric Observatory for Infrared Astronomy) are described. The analyses establish the diffraction-limited point-spread function for the planned central obscuration of the telescope, confirm the specification for the oversized primary mirror diameter, evaluate spider diffraction effects, and determine the variation in focal-plane flux with position of the telescope relative to the cavity door. The latter is a concern because motion between the door aperture and the telescope can vary the flux from a point source and the sky background by diffraction (even when the door aperture does not physically obstruct the geometrical beam). We find all these effects to be acceptable in terms of observatory performance, with the possible exception of fractional background variations 3E-3 at wavelengths 1mm. Fractional background variations larger than 1E-6 can exceed photon shot noise in one second for broad-band, background-limited infrared detectors systems. However, we expect that synchronous signal demodulation using the telescope's chopping secondary mirror will obviate this effect, assuming modulation of the diffracted sky radiation by the relative motion of the door and telescope occurs at frequencies well below the chopoper frequency. This work is supported by the National Aeronautics and Space Administration.

  16. Subtelomeric Rearrangements and Copy Number Variations in People with Intellectual Disabilities

    ERIC Educational Resources Information Center

    Christofolini, D. M.; De Paula Ramos, M. A.; Kulikowski, L. D.; Da Silva Bellucco, F. T.; Belangero, S. I. N.; Brunoni, D.; Melaragno, M. I.

    2010-01-01

    Background: The most prevalent type of structural variation in the human genome is represented by copy number variations that can affect transcription levels, sequence, structure and function of genes. Method: In the present study, we used the multiplex ligation-dependent probe amplification (MLPA) technique and quantitative PCR for the detection…

  17. Simultaneous stereoselective analysis by capillary electrophoresis of tramadol enantiomers and their main phase I metabolites in urine.

    PubMed

    Rudaz, S; Veuthey, J L; Desiderio, C; Fanali, S

    1999-06-18

    Capillary zone electrophoresis was successfully applied to the enantiomeric resolution of racemic tramadol and its six phase I metabolites using carboxymethylated beta-cyclodextrin (CMB) added to the background electrolyte (BGE). Baseline resolution of tramadol and its metabolites was obtained in less than 30 min using a 50 mM phosphate buffer (pH 2.5) containing 5 mM of CMB. Chiral determinations of tramadol and its main three metabolites, O-demethyltramadol (M1), N-demethyltramadol (M2) and O-demethyl-N-demethyltramadol (M5), were performed in urine after a simple double liquid-liquid extraction of 200 microliters of biological material. In the tested concentration range (0.5-20 micrograms/ml, except for M2: 0.5-10 micrograms/ml) coefficients of correlation superior than 0.994 were obtained. Within-day variation determined on three different concentrations for each enantiomers showed accuracies ranging from 95.4% to 103.2%. The relative standard deviation (RSD) of these assays was determined to be less than 10.0%. Day-to-day variation presented accuracies ranging from 96.3% to 106.5% with a RSD less than 9.0%. After oral administration of 100 mg of tramadol hydrochloride to an healthy volunteer, the urinary excretion was monitored during 30 h. About 15% of the dose was excreted as unchanged tramadol. The enantiomeric ratios of all the excreted analytes, T, M1, M2 and M5, were found to be very different to 1.0, showing that a stereoselective metabolism of tramadol clearly occurred.

  18. The Effect of Boiling on Seismic Properties of Water-Saturated Fractured Rock

    NASA Astrophysics Data System (ADS)

    Grab, Melchior; Quintal, Beatriz; Caspari, Eva; Deuber, Claudia; Maurer, Hansruedi; Greenhalgh, Stewart

    2017-11-01

    Seismic campaigns for exploring geothermal systems aim at detecting permeable formations in the subsurface and evaluating the energy state of the pore fluids. High-enthalpy geothermal resources are known to contain fluids ranging from liquid water up to liquid-vapor mixtures in regions where boiling occurs and, ultimately, to vapor-dominated fluids, for instance, if hot parts of the reservoir get depressurized during production. In this study, we implement the properties of single- and two-phase fluids into a numerical poroelastic model to compute frequency-dependent seismic velocities and attenuation factors of a fractured rock as a function of fluid state. Fluid properties are computed while considering that thermodynamic interaction between the fluid phases takes place. This leads to frequency-dependent fluid properties and fluid internal attenuation. As shown in a first example, if the fluid contains very small amounts of vapor, fluid internal attenuation is of similar magnitude as attenuation in fractured rock due to other mechanisms. In a second example, seismic properties of a fractured geothermal reservoir with spatially varying fluid properties are calculated. Using the resulting seismic properties as an input model, the seismic response of the reservoir is then computed while the hydrothermal structure is assumed to vary over time. The resulting seismograms demonstrate that anomalies in the seismic response due to fluid state variability are small compared to variations caused by geological background heterogeneity. However, the hydrothermal structure in the reservoir can be delineated from amplitude anomalies when the variations due to geology can be ruled out such as in time-lapse experiments.

  19. Numerical assessment of factors affecting nonlinear internal waves in the South China Sea

    NASA Astrophysics Data System (ADS)

    Li, Qiang

    2014-02-01

    Nonlinear internal waves in the South China Sea exhibit diverse characteristics, which are associated with the complex conditions in Luzon Strait, such as the double ridge topography, the Earth’s rotation, variations in stratification and the background current induced by the Kuroshio. These effects are individually assessed using the MITgcm. The performance of the model is first validated through comparison with field observations. Because of in-phased ray interaction, the western ridge in Luzon Strait intensifies the semidiurnal internal tides generated from the eastern ridge, thus reinforcing the formation of nonlinear internal waves. However, the ray interaction for K1 forcing becomes anti-phased so that the K1 internal tide generation is reduced by the western ridge. Not only does the rotational dispersion suppress internal tide generation, it also inhibits nonlinear steepening and consequent internal solitary wave formation. As a joint effect, the double ridges and the rotational dispersion result in a paradoxical phenomenon: diurnal barotropic tidal forcing is dominant in Luzon Strait, but semidiurnal internal tides prevail in the deep basin of the South China Sea. The seasonal variation of the Kuroshio is consistent with the seasonal appearance of nonlinear internal waves in the South China Sea. The model results show that the westward inflow due to the Kuroshio intrusion reduces the amplitude of internal tides in the South China Sea, causing the weakening or absence of internal solitary waves. Winter stratification cannot account for the significant reduction of nonlinear internal waves, because the amplitude growth of internal tides due to increased thermocline tilting counteracts the reduced nonlinearity caused by thermocline deepening.

  20. ON THE ROLE OF THE BACKGROUND OVERLYING MAGNETIC FIELD IN SOLAR ERUPTIONS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nindos, A.; Patsourakos, S.; Wiegelmann, T., E-mail: anindos@cc.uoi.gr

    2012-03-20

    The primary constraining force that inhibits global solar eruptions is provided by the overlying background magnetic field. Using magnetic field data from both the Helioseismic and Magnetic Imager aboard the Solar Dynamics Observatory and the spectropolarimeter of the Solar Optical Telescope aboard Hinode, we study the long-term evolution of the background field in active region AR11158 that produced three major coronal mass ejections (CMEs). The CME formation heights were determined using EUV data. We calculated the decay index -(z/B)({partial_derivative}B/{partial_derivative}z) of the magnetic field B (i.e., how fast the field decreases with height, z) related to each event from the timemore » of the active region emergence until well after the CMEs. At the heights of CME formation, the decay indices were 1.1-2.1. Prior to two of the events, there were extended periods (of more than 23 hr) where the related decay indices at heights above the CME formation heights either decreased (up to -15%) or exhibited small changes. The decay index related to the third event increased (up to 118%) at heights above 20 Mm within an interval that started 64 hr prior to the CME. The magnetic free energy and the accumulated helicity into the corona contributed the most to the eruptions by their increase throughout the flux emergence phase (by factors of more than five and more than two orders of magnitude, respectively). Our results indicate that the initiation of eruptions does not depend critically on the temporal evolution of the variation of the background field with height.« less

  1. Practical considerations for estimating clinical trial accrual periods: application to a multi-center effectiveness study

    PubMed Central

    Carter, Rickey E; Sonne, Susan C; Brady, Kathleen T

    2005-01-01

    Background Adequate participant recruitment is vital to the conduct of a clinical trial. Projected recruitment rates are often over-estimated, and the time to recruit the target population (accrual period) is often under-estimated. Methods This report illustrates three approaches to estimating the accrual period and applies the methods to a multi-center, randomized, placebo controlled trial undergoing development. Results Incorporating known sources of accrual variation can yield a more justified estimate of the accrual period. Simulation studies can be incorporated into a clinical trial's planning phase to provide estimates for key accrual summaries including the mean and standard deviation of the accrual period. Conclusion The accrual period of a clinical trial should be carefully considered, and the allocation of sufficient time for participant recruitment is a fundamental aspect of planning a clinical trial. PMID:15796782

  2. Photochemical modeling of nonmigrating tides in the 15 μm infrared cooling of the lower thermosphere over one solar cycle and comparison with SABER

    NASA Astrophysics Data System (ADS)

    Nischal, N.; Oberheide, J.; Mlynczak, M. G.; Hunt, L. A.; Maute, A. I.

    2015-12-01

    Tidal diagnostics of SABER CO2 15 μm data shows a substantial modulation of the energy budget of the lower thermosphere due to nonmigrating tides: relative amplitudes of the CO2 cooling rates for the DE2 and DE3 components are on the order of 15-50% with respect to the monthly mean emissions. Supporting photochemical tidal modeling using TIME-GCM and the empirical CTMT model reproduces the general amplitude structures and phases. Furthermore, it indicates that the main tidal coupling mechanism is the temperature dependence of the collisional excitation of the CO2 (01101) fundamental band transition (ν2). The response to neutral density variations is as important as temperature above 115 km as such explaining an unexpected tidal phase behavior in the observation. The contribution of vertical advection is comparatively small. In order to test the sensitivity of the modeled DE2 and DE3 CO2 VER tides to the solar cycle and to the specific choice of mean temperature, atomic oxygen, and CO2 density, we extend the modeling by using background from MSIS, SABER, and SCIAMACHY. The results indicate that the current uncertainties in the background temperature and atomic oxygen used for the photochemical modeling do not impact our conclusion about the relative importance of the tidal coupling mechanisms. Our results quantify the response of the CO2 15 μm infrared cooling of the lower thermosphere to tropospheric tides and delineate the coupling mechanisms that lead to the observed strong longitudinal and local time variability.

  3. Status of the GERDA Phase II upgrade

    NASA Astrophysics Data System (ADS)

    Wagner, Victoria

    2016-06-01

    The GERDA experiment is designed to search for neutrinoless double beta (0νββ) decay of 76Ge. In Phase I of the experiment a background index of 10-2 cts/(keV.kg.yr) was reached. A lower limit on the half-life of the 0νββ decay of 76Ge was set to 2.1.1025 yr (at 90% C.L.). The aim of Phase II is to reach a sensitivity of the half-life of about 1026 yr. To increase the exposure thirty new Broad Energy Germanium (BEGe) detectors have been produced. These detectors are distinct for their improved energy resolution and enhanced pulse shape discrimination of signal from background events. Further background reduction will be reached by a light instrumentation to read out argon scintillation light. In April 2015 the light instrumentation together with eight BEGe detectors has been successfully deployed in the GERDA cryostat. In a commissioning run it was shown that two of the major background components, external γ-rays from 214Bi and 208Tl decays, were suppressed up to two orders of magnitude. We are confident to reach a background index of 10-3 cts/(keV.kg.yr) which is the design goal for GERDA Phase II.

  4. Chemical Variation of Silicate Mineral Phases in Lunar Feldspathic Granulitic Impactites: Implications for Thermal Histories and Provenances

    NASA Technical Reports Server (NTRS)

    Fincke, E. M.; Ryder, G.

    2001-01-01

    We report on the internal variation and abundances of minor elements of silicate phases in lunar granulitic impactites to assess their thermal histories and the pre-metamorphic provenances of the minerals and the process that assembled the rocks. Additional information is contained in the original extended abstract.

  5. Investigation of characteristics and transformation processes of megacity emission plumes using a mobile laboratory in the Paris metropolitan area

    NASA Astrophysics Data System (ADS)

    von der Weiden-Reinmüller, S.-L.; Drewnick, F.; Zhang, Q.; Meleux, F.; Beekmann, M.; Borrmann, S.

    2012-04-01

    A growing fraction of the world's population is living in urban agglomerations of increasing size. Currently, 20 cities worldwide qualify as so-called megacities, having more than 10 million inhabitants. These intense pollution hot-spots cause a number of scientific questions concerning their influence on local and regional air quality, which is connected with human health, flora and fauna. In the framework of the European Union FP7 MEGAPOLI project (Megacities: Emissions, urban, regional and Global Atmospheric POLlution and climate effects, and Integrated tools for assessment and mitigation) two major field campaigns were carried out in the greater Paris region in July 2009 and January/February 2010. This work presents results from mobile particulate and gas phase measurements with focus on the characteristics of the Paris emission plume and its impact on the regional air quality and on aerosol transformation processes within this plume as it travels away from its source. In addition differences between summer and winter conditions are discussed. The mobile laboratory was equipped with high time resolution instrumentation to measure particle number concentrations (dP > 2.5 nm), size distributions (dP ~ 5 nm - 32 μm), sub-micron chemical composition (non-refractory species using Aerodyne HR-ToF-AMS, PAH and black carbon) as well as major trace gases (CO2, SO2, O3, NOx) and standard meteorological parameters. On-board webcam and GPS allow detailed monitoring of traffic situation and vehicle track. In a total of 29 mobile and 25 stationary measurements with the mobile laboratory the Paris emission plume as well as the atmospheric background was characterized under various meteorological conditions. This allows investigating the influence of external factors like temperature, solar radiation or precipitation on the plume characteristics. Three measurement strategies were applied to investigate the emission plume. First, circular mobile measurements around Paris provide cross sections through plume air masses as well as local background variation measurements. Second, radial measurement trips beginning near the outer area of the agglomeration extending up to ~200 km distance from Paris along the direction of the emission plume provide insight into the extension of the plume and transformation processes. Third, stationary measurements at different locations provide background as well as pollution measurements, especially if the wind direction is shifting, causing the plume to pass over the measurement site. During radial measurement trips the decrease in the concentrations of primary pollution marker species as hydrocarbon-like organic aerosol, black carbon, PAH and NOx with increasing distance from Paris is clearly observed. This decrease is mainly caused by dilution processes, but additional aging effects are also detectable. While entering the emission plume on cross section measurements a significant increase in such marker species compared to background values can be seen. On the other hand, overall statistics of both campaigns shows that day-to-day background variations influenced mainly by long range transported pollution (i.e. air mass origin) are stronger than variations between background and plume on specific days. A description of the methods developed for analysing the mobile data will complete this presentation.

  6. Background-free search for neutrinoless double-β decay of 76Ge with GERDA.

    PubMed

    2017-04-05

    Many extensions of the Standard Model of particle physics explain the dominance of matter over antimatter in our Universe by neutrinos being their own antiparticles. This would imply the existence of neutrinoless double-β decay, which is an extremely rare lepton-number-violating radioactive decay process whose detection requires the utmost background suppression. Among the programmes that aim to detect this decay, the GERDA Collaboration is searching for neutrinoless double-β decay of 76 Ge by operating bare detectors, made of germanium with an enriched 76 Ge fraction, in liquid argon. After having completed Phase I of data taking, we have recently launched Phase II. Here we report that in GERDA Phase II we have achieved a background level of approximately 10 -3 counts keV -1 kg -1 yr -1 . This implies that the experiment is background-free, even when increasing the exposure up to design level. This is achieved by use of an active veto system, superior germanium detector energy resolution and improved background recognition of our new detectors. No signal of neutrinoless double-β decay was found when Phase I and Phase II data were combined, and we deduce a lower-limit half-life of 5.3 × 10 25 years at the 90 per cent confidence level. Our half-life sensitivity of 4.0 × 10 25 years is competitive with the best experiments that use a substantially larger isotope mass. The potential of an essentially background-free search for neutrinoless double-β decay will facilitate a larger germanium experiment with sensitivity levels that will bring us closer to clarifying whether neutrinos are their own antiparticles.

  7. Background-free search for neutrinoless double-β decay of 76Ge with GERDA

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Allardt, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Belyaev, S. T.; Benato, G.; Bettini, A.; Bezrukov, L.; Bode, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; di Marco, N.; di Vacri, A.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Fedorova, O.; Freund, K.; Frodyma, N.; Gangapshev, A.; Garfagnini, A.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Janicskó Csáthy, J.; Jochum, J.; Junker, M.; Kazalov, V.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Lehnert, B.; Liao, H. Y.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Medinaceli, E.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Palioselitis, D.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Salathe, M.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schulz, O.; Schütz, A.-K.; Schwingenheuer, B.; Selivanenko, O.; Shevchik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Walter, M.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zuber, K.; Zuzel, G.; GERDA Collaboration

    2017-04-01

    Many extensions of the Standard Model of particle physics explain the dominance of matter over antimatter in our Universe by neutrinos being their own antiparticles. This would imply the existence of neutrinoless double-β decay, which is an extremely rare lepton-number-violating radioactive decay process whose detection requires the utmost background suppression. Among the programmes that aim to detect this decay, the GERDA Collaboration is searching for neutrinoless double-β decay of 76Ge by operating bare detectors, made of germanium with an enriched 76Ge fraction, in liquid argon. After having completed Phase I of data taking, we have recently launched Phase II. Here we report that in GERDA Phase II we have achieved a background level of approximately 10-3 counts keV-1 kg-1 yr-1. This implies that the experiment is background-free, even when increasing the exposure up to design level. This is achieved by use of an active veto system, superior germanium detector energy resolution and improved background recognition of our new detectors. No signal of neutrinoless double-β decay was found when Phase I and Phase II data were combined, and we deduce a lower-limit half-life of 5.3 × 1025 years at the 90 per cent confidence level. Our half-life sensitivity of 4.0 × 1025 years is competitive with the best experiments that use a substantially larger isotope mass. The potential of an essentially background-free search for neutrinoless double-β decay will facilitate a larger germanium experiment with sensitivity levels that will bring us closer to clarifying whether neutrinos are their own antiparticles.

  8. Phase correction for three-dimensional (3D) diffusion-weighted interleaved EPI using 3D multiplexed sensitivity encoding and reconstruction (3D-MUSER).

    PubMed

    Chang, Hing-Chiu; Hui, Edward S; Chiu, Pui-Wai; Liu, Xiaoxi; Chen, Nan-Kuei

    2018-05-01

    Three-dimensional (3D) multiplexed sensitivity encoding and reconstruction (3D-MUSER) algorithm is proposed to reduce aliasing artifacts and signal corruption caused by inter-shot 3D phase variations in 3D diffusion-weighted echo planar imaging (DW-EPI). 3D-MUSER extends the original framework of multiplexed sensitivity encoding (MUSE) to a hybrid k-space-based reconstruction, thereby enabling the correction of inter-shot 3D phase variations. A 3D single-shot EPI navigator echo was used to measure inter-shot 3D phase variations. The performance of 3D-MUSER was evaluated by analyses of point-spread function (PSF), signal-to-noise ratio (SNR), and artifact levels. The efficacy of phase correction using 3D-MUSER for different slab thicknesses and b-values were investigated. Simulations showed that 3D-MUSER could eliminate artifacts because of through-slab phase variation and reduce noise amplification because of SENSE reconstruction. All aliasing artifacts and signal corruption in 3D interleaved DW-EPI acquired with different slab thicknesses and b-values were reduced by our new algorithm. A near-whole brain single-slab 3D DTI with 1.3-mm isotropic voxel acquired at 1.5T was successfully demonstrated. 3D phase correction for 3D interleaved DW-EPI data is made possible by 3D-MUSER, thereby improving feasible slab thickness and maximum feasible b-value. Magn Reson Med 79:2702-2712, 2018. © 2017 International Society for Magnetic Resonance in Medicine. © 2017 International Society for Magnetic Resonance in Medicine.

  9. Serendipitous Detections of XTE J1906+09 with the Rossi X-Ray Timing Explorer

    NASA Technical Reports Server (NTRS)

    Wilson, Colleen A.; Finger, Mark H.; Gogus, Ersin; Woods, Peter M.; Kouveliotou, Chryssa

    2002-01-01

    The 89 s X-ray pulsar XTE J1906+09 was discovered during Rossi X-Ray Timing Explorer (RXTE) observations of SGR 1900+14 in 1996. Because of monitoring campaigns of SGR 1900+14, XTE J1906+09 was also monitored regularly in 1996 September, 1998 May-June, 1998 August-1999 July, and 2000 March-2001 January. A search for pulsations resulted in detections of only the two previously reported outbursts in 1996 September and 1998 August-September. Pulsed flux upper limits for the rest of the observations show that XTE J1906+09 is a transient X-ray pulsar and likely has a Be star companion. The RXTE all-sky monitor did not reveal XTE J1906+09. Pulse-timing analysis of the second outburst discovered a sinusoidal signature in the pulse frequencies that is likely produced by an orbital periastron passage. Fits to pulse phases using an orbital model and quadratic phase model have chi(exp 2) minima at orbital periods of 26-30 days for fixed mass functions of 5, 10, 15, and 20 solar masses. The pulse shape showed energy- and intensity-dependent variations. Pulse-phase spectroscopy quantified the energy-dependent variations. The phase-averaged spectrum used the pulse minimum spectrum as the background spectrum to eliminate effects from SGR 1900+14 and the Galactic ridge and was well fitted by an absorbed power law with a high-energy cutoff with column density N(sub H) = 6 +/- 1 x 10(exp 22)/sq cm, a photon index of 1.01 +/- 0.08, cutoff energy E(sub cut) = 11 +/- 1 keV, and e-folding energy E(sub fold) = 19 +/- 4 keV. Estimated 2-10 keV peak fluxes, corrected for contributions from the Galactic ridge and SGR 1900+14, are 6 x l0(exp -12) and 1.1 x 10(exp -10) ergs/sq cm/s for the 1996 and 1998 outbursts, respectively. XTE J1906+09 may be part of an unusual class of Be/X-ray binaries that do not lie on the general spin period versus orbital period correlation with the majority of Be/X-ray binaries.

  10. Geometry in transition in four dimensions: A model of emergent geometry in the early universe

    NASA Astrophysics Data System (ADS)

    Ydri, Badis; Khaled, Ramda; Ahlam, Rouag

    2016-10-01

    We study a six matrix model with global S O (3 )×S O (3 ) symmetry containing at most quartic powers of the matrices. This theory exhibits a phase transition from a geometrical phase at low temperature to a Yang-Mills matrix phase with no background geometrical structure at high temperature. This is an exotic phase transition in the same universality class as the three matrix model but with important differences. The geometrical phase is determined dynamically, as the system cools, and is given by a fuzzy sphere background SN2×SN2, with an Abelian gauge field which is very weakly coupled to two normal scalar fields.

  11. Theta frequency background tunes transmission but not summation of spiking responses.

    PubMed

    Parameshwaran, Dhanya; Bhalla, Upinder S

    2013-01-01

    Hippocampal neurons are known to fire as a function of frequency and phase of spontaneous network rhythms, associated with the animal's behaviour. This dependence is believed to give rise to precise rate and temporal codes. However, it is not well understood how these periodic membrane potential fluctuations affect the integration of synaptic inputs. Here we used sinusoidal current injection to the soma of CA1 pyramidal neurons in the rat brain slice to simulate background oscillations in the physiologically relevant theta and gamma frequency range. We used a detailed compartmental model to show that somatic current injection gave comparable results to more physiological synaptically driven theta rhythms incorporating excitatory input in the dendrites, and inhibitory input near the soma. We systematically varied the phase of synaptic inputs with respect to this background, and recorded changes in response and summation properties of CA1 neurons using whole-cell patch recordings. The response of the cell was dependent on both the phase of synaptic inputs and frequency of the background input. The probability of the cell spiking for a given synaptic input was up to 40% greater during the depolarized phases between 30-135 degrees of theta frequency current injection. Summation gain on the other hand, was not affected either by the background frequency or the phasic afferent inputs. This flat summation gain, coupled with the enhanced spiking probability during depolarized phases of the theta cycle, resulted in enhanced transmission of summed inputs during the same phase window of 30-135 degrees. Overall, our study suggests that although oscillations provide windows of opportunity to selectively boost transmission and EPSP size, summation of synaptic inputs remains unaffected during membrane oscillations.

  12. Progress toward accurate high spatial resolution actinide analysis by EPMA

    NASA Astrophysics Data System (ADS)

    Jercinovic, M. J.; Allaz, J. M.; Williams, M. L.

    2010-12-01

    High precision, high spatial resolution EPMA of actinides is a significant issue for geochronology, resource geochemistry, and studies involving the nuclear fuel cycle. Particular interest focuses on understanding of the behavior of Th and U in the growth and breakdown reactions relevant to actinide-bearing phases (monazite, zircon, thorite, allanite, etc.), and geochemical fractionation processes involving Th and U in fluid interactions. Unfortunately, the measurement of minor and trace concentrations of U in the presence of major concentrations of Th and/or REEs is particularly problematic, especially in complexly zoned phases with large compositional variation on the micro or nanoscale - spatial resolutions now accessible with modern instruments. Sub-micron, high precision compositional analysis of minor components is feasible in very high Z phases where scattering is limited at lower kV (15kV or less) and where the beam diameter can be kept below 400nm at high current (e.g. 200-500nA). High collection efficiency spectrometers and high performance electron optics in EPMA now allow the use of lower overvoltage through an exceptional range in beam current, facilitating higher spatial resolution quantitative analysis. The U LIII edge at 17.2 kV precludes L-series analysis at low kV (high spatial resolution), requiring careful measurements of the actinide M series. Also, U-La detection (wavelength = 0.9A) requires the use of LiF (220) or (420), not generally available on most instruments. Strong peak overlaps of Th on U make highly accurate interference correction mandatory, with problems compounded by the ThMIV and ThMV absorption edges affecting peak, background, and interference calibration measurements (especially the interference of the Th M line family on UMb). Complex REE bearing phases such as monazite, zircon, and allanite have particularly complex interference issues due to multiple peak and background overlaps from elements present in the activation volume, as well as interferences from fluorescence at a distance from adjacent phases or distinct compositional domains in the same phase. Interference corrections for elements detected during boundary fluorescence are further complicated by X-ray focusing geometry considerations. Additional complications arise from the high current densities required for high spatial resolution and high count precision, such as fluctuations in internal charge distribution and peak shape changes as satellite production efficiency varies from calibration to analysis. No flawless method has yet emerged. Extreme care in interference corrections, especially where multiple and sometime mutual overlaps are present, and maximum care (and precision) in background characterization to account for interferences and curvature (e.g., WDS scan or multipoint regression), are crucial developments. Calibration curves from multiple peak and interference calibration measurements at different concentrations, and iterative software methodologies for incorporating absorption edge effects, and non-linearities in interference corrections due to peak shape changes and off-axis X-ray defocussing during boundary fluorescence at a distance, are directions with significant potential.

  13. Seasonal and interannual variations of atmospheric CO2 and climate

    USGS Publications Warehouse

    Dettinger, M.D.; Ghil, M.

    1998-01-01

    Interannual variations of atmospheric CO2 concentrations at Mauna Loa are almost masked by the seasonal cycle and a strong trend; at the South Pole, the seasonal cycle is small and is almost lost in the trend and interannual variations. Singular-spectrum analysis (SSA) issued here to isolate and reconstruct interannual signals at both sites and to visualize recent decadal changes in the amplitude and phase of the seasonal cycle. Analysis of the Mauna Loa CO2 series illustrates a hastening of the CO2 seasonal cycle, a close temporal relation between Northern Hemisphere (NH) mean temperature trends and the amplitude of the seasonal CO2 cycle, and tentative ties between the latter and seasonality changes in temperature over the NH continents. Variations of the seasonal CO2 cycle at the South Pole differ from those at Mauna Loa: it is phase changes of the seasonal cycle at the South Pole, rather than amplitude changes, that parallel hemispheric and global temperature trends. The seasonal CO2 cycles exhibit earlier occurrences of the seasons by 7 days at Mauna Loa and 18 days at the South Pole. Interannual CO2 variations are shared at the two locations, appear to respond to tropical processes, and can be decomposed mostly into two periodicities, around (3 years)-1 and (4 years)-1, respectively. Joint SSA analyses of CO2 concentrations and tropical climate indices isolate a shared mode with a quasi-triennial (QT) period in which the CO2 and sea-surface temperature (SST) participation are in phase opposition. The other shared mode has a quasi-quadrennial (QQ) period and CO2 variations are in phase with the corresponding tropical SST variations throughout the tropics. Together these interannual modes exhibit a mean lag between tropical SSTs and CO2 variations of about 6-8 months, with SST leading. Analysis of the QT and QQ signals in global gridded SSTs, joint SSA of CO2 and ??13C isotopic ratios, and SSA of CO2 and NH-land temperatures indicate that the QT variations in CO2 mostly reflect upwelling variations in the eastern tropical Pacific. QQ variations are dominated by the CO2 signature of terrestrial-ecosystem response to global QQ climate variations. Climate variations associated with these two interannual components of tropical variability have very different effects on global climate and, especially, on terrestrial ecosystems and the carbon cycle.

  14. Inertial Measures of Motion for Clinical Biomechanics: Comparative Assessment of Accuracy under Controlled Conditions – Changes in Accuracy over Time

    PubMed Central

    Lebel, Karina; Boissy, Patrick; Hamel, Mathieu; Duval, Christian

    2015-01-01

    Background Interest in 3D inertial motion tracking devices (AHRS) has been growing rapidly among the biomechanical community. Although the convenience of such tracking devices seems to open a whole new world of possibilities for evaluation in clinical biomechanics, its limitations haven’t been extensively documented. The objectives of this study are: 1) to assess the change in absolute and relative accuracy of multiple units of 3 commercially available AHRS over time; and 2) to identify different sources of errors affecting AHRS accuracy and to document how they may affect the measurements over time. Methods This study used an instrumented Gimbal table on which AHRS modules were carefully attached and put through a series of velocity-controlled sustained motions including 2 minutes motion trials (2MT) and 12 minutes multiple dynamic phases motion trials (12MDP). Absolute accuracy was assessed by comparison of the AHRS orientation measurements to those of an optical gold standard. Relative accuracy was evaluated using the variation in relative orientation between modules during the trials. Findings Both absolute and relative accuracy decreased over time during 2MT. 12MDP trials showed a significant decrease in accuracy over multiple phases, but accuracy could be enhanced significantly by resetting the reference point and/or compensating for initial Inertial frame estimation reference for each phase. Interpretation The variation in AHRS accuracy observed between the different systems and with time can be attributed in part to the dynamic estimation error, but also and foremost, to the ability of AHRS units to locate the same Inertial frame. Conclusions Mean accuracies obtained under the Gimbal table sustained conditions of motion suggest that AHRS are promising tools for clinical mobility assessment under constrained conditions of use. However, improvement in magnetic compensation and alignment between AHRS modules are desirable in order for AHRS to reach their full potential in capturing clinical outcomes. PMID:25811838

  15. Clinical trial on the efficacy of exhaled carbon monoxide measurement in smoking cessation in primary health care

    PubMed Central

    2012-01-01

    Background Smoking cessation is beneficial for our health at any point in life, both in healthy people and in people already suffering from a smoking-related disease. Any help to quit smoking can produce considerable benefits for Public Health. The purpose of the present study is to evaluate the efficacy of the CO-oximetry technique together with brief advice in smoking cessation, in terms of reduction of the number of cigarettes or in the variation of the motivation to quit smoking at month 12 compared with brief advice alone. Methods/Design Randomised, parallel, single-blind clinical trial in a primary health care setting in Majorca (Spain). Smokers in contemplation or pre-contemplation phase will be included in the study. Exclusion criteria: Smokers in preparation phase, subjects with a terminal illness or whose health status does not allow them to understand the study or complete the informed consent, and pregnant or breastfeeding women. The subjects will be randomly assigned to the control group (CG) or the intervention group (IG). The CG will receive brief advice, and the IG will receive brief advice together with a measurement of exhaled CO. There will be follow-up evaluations at 6 and 12 months after inclusion. 471 subjects will be needed per group in order to detect a difference between groups ≥ 5%. Primary outcome: sustained smoking cessation (at 6 and 12 months) confirmed by urine cotinine test. Secondary outcomes: point smoking cessation at 6 and 12 months both confirmed by urine cotinine analysis and self-reported, reduction in cigarette consumption, and variation in phase of smoking cessation. Discussion CO-oximetry is an inexpensive, non-invasive, fast technique that requires little technical training; making it a technique for risk assessment in smokers that can be easily applied in primary care and, if proven effective, could serve as a reinforcement aid in smoking cessation intervention activities. Trial Registration Current Controlled Trials ISRCTN67499921 PMID:22551017

  16. Local adaptation within a hybrid species

    PubMed Central

    Eroukhmanoff, F; Hermansen, J S; Bailey, R I; Sæther, S A; Sætre, G-P

    2013-01-01

    Ecological divergence among populations may be strongly influenced by their genetic background. For instance, genetic admixture through introgressive hybridization or hybrid speciation is likely to affect the genetic variation and evolvability of phenotypic traits. We studied geographic variation in two beak dimensions and three other phenotypic traits of the Italian sparrow (Passer italiae), a young hybrid species formed through interbreeding between house sparrows (P. domesticus) and Spanish sparrows (P. hispaniolensis). We found that beak morphology was strongly influenced by precipitation regimes and that it appeared to be the target of divergent selection within Italian sparrows. Interestingly, however, the degree of parental genetic contribution in the hybrid species had no effect on phenotypic beak variation. Moreover, beak height divergence may mediate genetic differentiation between populations, consistent with isolation-by-adaptation within this hybrid species. The study illustrates how hybrid species may be relatively unconstrained by their admixed genetic background, allowing them to adapt rapidly to environmental variation. PMID:23695379

  17. Inter- and intraindividual correlations of background abundances of (2)H, (18)O and (17)O in human urine and implications for DLW measurements.

    PubMed

    Berman, E S F; Melanson, E L; Swibas, T; Snaith, S P; Speakman, J R

    2015-10-01

    The method of choice for measuring total energy expenditure in free-living individuals is the doubly labeled water (DLW) method. This experiment examined the behavior of natural background isotope abundance fluctuations within and between individuals over time to assess possible methods of accounting for variations in the background isotope abundances to potentially improve the precision of the DLW measurement. In this work, we measured natural background variations in (2)H, (18)O and (17)O in water from urine samples collected from 40 human subjects who resided in the same geographical area. Each subject provided a urine sample for 30 consecutive days. Isotopic abundances in the samples were measured using Off-Axis Integrated Cavity Output Spectroscopy. Autocorrelation analyses demonstrated that the background isotopes in a given individual were not temporally correlated over the time scales of typical DLW studies. Using samples obtained from different individuals on the same calendar day, cross-correlation analyses demonstrated that the background variations of different individuals were not correlated in time. However, the measured ratios of the three isotopes (2)H, (18)O and (17)O were highly correlated (R(2)=0.89-0.96). Although neither specific timing of DLW water studies nor intraindividual comparisons were found to be avenues for reducing the impact of background isotope abundance fluctuations on DLW studies, strong inter-isotope correlations within an individual confirm that use of a dosing ratio of 8‰:1‰ (0.6 p.p.m.: p.p.m.) optimizes DLW precision. Theoretical implications for the possible use of (17)O measurements within a DLW study require further study.

  18. Image correction during large and rapid B(0) variations in an open MRI system with permanent magnets using navigator echoes and phase compensation.

    PubMed

    Li, Jianqi; Wang, Yi; Jiang, Yu; Xie, Haibin; Li, Gengying

    2009-09-01

    An open permanent magnet system with vertical B(0) field and without self-shielding can be quite susceptible to perturbations from external magnetic sources. B(0) variation in such a system located close to a subway station was measured to be greater than 0.7 microT by both MRI and a fluxgate magnetometer. This B(0) variation caused image artifacts. A navigator echo approach that monitored and compensated the view-to-view variation in magnetic resonance signal phase was developed to correct for image artifacts. Human brain imaging experiments using a multislice gradient-echo sequence demonstrated that the ghosting and blurring artifacts associated with B(0) variations were effectively removed using the navigator method.

  19. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Church, J; Slaughter, D; Norman, E

    Error rates in a cargo screening system such as the Nuclear Car Wash [1-7] depend on the standard deviation of the background radiation count rate. Because the Nuclear Car Wash is an active interrogation technique, the radiation signal for fissile material must be detected above a background count rate consisting of cosmic, ambient, and neutron-activated radiations. It was suggested previously [1,6] that the Corresponding negative repercussions for the sensitivity of the system were shown. Therefore, to assure the most accurate estimation of the variation, experiments have been performed to quantify components of the actual variance in the background count rate,more » including variations in generator power, irradiation time, and container contents. The background variance is determined by these experiments to be a factor of 2 smaller than values assumed in previous analyses, resulting in substantially improved projections of system performance for the Nuclear Car Wash.« less

  20. DIFFUSED SOLUTE-SOLVENT INTERFACE WITH POISSON-BOLTZMANN ELECTROSTATICS: FREE-ENERGY VARIATION AND SHARP-INTERFACE LIMIT.

    PubMed

    Li, B O; Liu, Yuan

    A phase-field free-energy functional for the solvation of charged molecules (e.g., proteins) in aqueous solvent (i.e., water or salted water) is constructed. The functional consists of the solute volumetric and solute-solvent interfacial energies, the solute-solvent van der Waals interaction energy, and the continuum electrostatic free energy described by the Poisson-Boltzmann theory. All these are expressed in terms of phase fields that, for low free-energy conformations, are close to one value in the solute phase and another in the solvent phase. A key property of the model is that the phase-field interpolation of dielectric coefficient has the vanishing derivative at both solute and solvent phases. The first variation of such an effective free-energy functional is derived. Matched asymptotic analysis is carried out for the resulting relaxation dynamics of the diffused solute-solvent interface. It is shown that the sharp-interface limit is exactly the variational implicit-solvent model that has successfully captured capillary evaporation in hydrophobic confinement and corresponding multiple equilibrium states of underlying biomolecular systems as found in experiment and molecular dynamics simulations. Our phase-field approach and analysis can be used to possibly couple the description of interfacial fluctuations for efficient numerical computations of biomolecular interactions.

  1. Genome-wide identification of copy number variations between two chicken lines that differ in genetic resistance to Marek’s disease

    USDA-ARS?s Scientific Manuscript database

    Background: Copy number variation (CNV) is a major source of genome polymorphism that directly contributes to phenotypic variation such as resistance to infectious diseases. Lines 63 and 72 are two highly inbred experimental chicken lines that differ greatly in susceptibility to Marek’s disease (MD)...

  2. Upgrade for Phase II of the Gerda experiment

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Belyaev, S. T.; Benato, G.; Bettini, A.; Bezrukov, L.; Bode, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; Di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Frodyma, N.; Gangapshev, A.; Garfagnini, A.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hiller, R.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Ioannucci, L.; Janicskó Csáthy, J.; Jochum, J.; Junker, M.; Kazalov, V.; Kermaïdic, Y.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Lehnert, B.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Medinaceli, E.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Nisi, S.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Ransom, C.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Salathe, M.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schütz, A.-K.; Schulz, O.; Schwingenheuer, B.; Selivanenko, O.; Shevchik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zsigmond, A. J.; Zuber, K.; Zuzel, G.

    2018-05-01

    The Gerda collaboration is performing a sensitive search for neutrinoless double beta decay of ^{76}Ge at the INFN Laboratori Nazionali del Gran Sasso, Italy. The upgrade of the Gerda experiment from Phase I to Phase II has been concluded in December 2015. The first Phase II data release shows that the goal to suppress the background by one order of magnitude compared to Phase I has been achieved. Gerda is thus the first experiment that will remain "background-free" up to its design exposure (100 kg year). It will reach thereby a half-life sensitivity of more than 10^{26} year within 3 years of data collection. This paper describes in detail the modifications and improvements of the experimental setup for Phase II and discusses the performance of individual detector components.

  3. SYNCHROTRON RADIATION, FREE ELECTRON LASER, APPLICATION OF NUCLEAR TECHNOLOGY, ETC. Employing a Cerenkov detector for the thickness measurement of X-rays in a scattering background

    NASA Astrophysics Data System (ADS)

    Li, Shu-Wei; Kang, Ke-Jun; Wang, Yi; Li, Jin; Li, Yuan-Jing; Zhang, Qing-Jun

    2010-12-01

    The variation in environmental scattering background is a major source of systematic errors in X-ray inspection and measurement systems. As the energy of these photons consisting of environmental scattering background is much lower generally, the Cerenkov detectors having the detection threshold are likely insensitive to them and able to exclude their influence. A thickness measurement experiment is designed to verify the idea by employing a Cerenkov detector and an ionizing chamber for comparison. Furthermore, it is also found that the application of the Cerenkov detectors is helpful to exclude another systematic error from the variation of low energy components in the spectrum incident on the detector volume.

  4. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Miller, James Christopher; Rennie, John Alan; Toevs, James Waldo

    The introduction points out that radiation backgrounds fluctuate across very short distances: factors include geology, soil composition, altitude, building structures, topography, and other manmade structures; and asphalt and concrete can vary significantly over short distances. Brief descriptions are given of the detection system, experimental setup, and background variation measurements. It is concluded that positive and negative gradients can greatly reduce the detection sensitivity of an MDS: negative gradients create opportunities for false negatives (nondetection), and positive gradients create a potentially unacceptable FAR (above 1%); the location of use for mobile detection is important to understand; spectroscopic systems provide more informationmore » for screening out false alarms and may be preferred for mobile use; and mobile monitor testing at LANL accounts for expected variations in the background.« less

  5. Contact line motion over substrates with spatially non-uniform properties

    NASA Astrophysics Data System (ADS)

    Ajaev, Vladimir; Gatapova, Elizaveta; Kabov, Oleg

    2017-11-01

    We develop mathematical models of moving contact lines over flat solid surfaces with spatial variation of temperature and wetting properties under the conditions when evaporation is significant. The gas phase is assumed to be pure vapor and a lubrication-type framework is employed for describing viscous flow in the liquid. Marangoni stresses at the liquid surface arise as a result of temperature variation in the vapor phase, non-equilibrium effects during evaporation at the interface, and Kelvin effect. The relative importance of these three factors is determined. Variation of wetting properties is modeled through a two-component disjoining pressure, with the main focus on spatially periodic patterns leading to time-periodic variation of the contact line speed.

  6. Variation in Second Language Learners' Strategies among Non-Native English Speakers from Three Language/Culture Backgrounds

    ERIC Educational Resources Information Center

    Ebsworth, Miriam Eisenstein; Tang, Frank Lixing; Razavi, Nikta; Aiello, Jacqueline

    2014-01-01

    This study explored the effects of cultural and linguistic background, L2 proficiency, and gender on language learning strategies for 263 college-level learners from Chinese, Russian, and Latino backgrounds. Data based on the SILL (Oxford, 2001) revealed that Russian students used significantly more strategies than the Chinese students in three…

  7. Integration of human sleep-wake regulation and circadian rhythmicity

    NASA Technical Reports Server (NTRS)

    Dijk, Derk-Jan; Lockley, Steven W.

    2002-01-01

    The human sleep-wake cycle is generated by a circadian process, originating from the suprachiasmatic nuclei, in interaction with a separate oscillatory process: the sleep homeostat. The sleep-wake cycle is normally timed to occur at a specific phase relative to the external cycle of light-dark exposure. It is also timed at a specific phase relative to internal circadian rhythms, such as the pineal melatonin rhythm, the circadian sleep-wake propensity rhythm, and the rhythm of responsiveness of the circadian pacemaker to light. Variations in these internal and external phase relationships, such as those that occur in blindness, aging, morning and evening, and advanced and delayed sleep-phase syndrome, lead to sleep disruptions and complaints. Changes in ocular circadian photoreception, interindividual variation in the near-24-h intrinsic period of the circadian pacemaker, and sleep homeostasis can contribute to variations in external and internal phase. Recent findings on the physiological and molecular-genetic correlates of circadian sleep disorders suggest that the timing of the sleep-wake cycle and circadian rhythms is closely integrated but is, in part, regulated differentially.

  8. Adaptive phase k-means algorithm for waveform classification

    NASA Astrophysics Data System (ADS)

    Song, Chengyun; Liu, Zhining; Wang, Yaojun; Xu, Feng; Li, Xingming; Hu, Guangmin

    2018-01-01

    Waveform classification is a powerful technique for seismic facies analysis that describes the heterogeneity and compartments within a reservoir. Horizon interpretation is a critical step in waveform classification. However, the horizon often produces inconsistent waveform phase, and thus results in an unsatisfied classification. To alleviate this problem, an adaptive phase waveform classification method called the adaptive phase k-means is introduced in this paper. Our method improves the traditional k-means algorithm using an adaptive phase distance for waveform similarity measure. The proposed distance is a measure with variable phases as it moves from sample to sample along the traces. Model traces are also updated with the best phase interference in the iterative process. Therefore, our method is robust to phase variations caused by the interpretation horizon. We tested the effectiveness of our algorithm by applying it to synthetic and real data. The satisfactory results reveal that the proposed method tolerates certain waveform phase variation and is a good tool for seismic facies analysis.

  9. Distributed phased array architecture study

    NASA Technical Reports Server (NTRS)

    Bourgeois, Brian

    1987-01-01

    Variations in amplifiers and phase shifters can cause degraded antenna performance, depending also on the environmental conditions and antenna array architecture. The implementation of distributed phased array hardware was studied with the aid of the DISTAR computer program as a simulation tool. This simulation provides guidance in hardware simulation. Both hard and soft failures of the amplifiers in the T/R modules are modeled. Hard failures are catastrophic: no power is transmitted to the antenna elements. Noncatastrophic or soft failures are modeled as a modified Gaussian distribution. The resulting amplitude characteristics then determine the array excitation coefficients. The phase characteristics take on a uniform distribution. Pattern characteristics such as antenna gain, half power beamwidth, mainbeam phase errors, sidelobe levels, and beam pointing errors were studied as functions of amplifier and phase shifter variations. General specifications for amplifier and phase shifter tolerances in various architecture configurations for C band and S band were determined.

  10. Quantum phase transition from mixed atom-molecule phase to pure molecule phase: Characteristic scaling laws and Berry-curvature signature

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li Shengchang; Graduate School, China Academy of Engineering Physics, Beijing 100088; Fu Libin

    2011-08-15

    We investigate the quantum phase transition in an ultracold atom-molecule conversion system. It is found that the system undergoes a phase transition from a mixed atom-molecule phase to a pure molecule phase when the energy bias exceeds a critical value. By constructing a coherent state as variational state, we get a good approximation of the quantum ground state of the system. Using this variational state, we deduce the critical point analytically. We then discuss the scaling laws characterizing the transition and obtain the corresponding critical exponents. Furthermore, the Berry curvature signature of the transition is studied. In particular, we findmore » that the derivatives of the Berry curvature with respect to total particle number intersect at the critical point. The underlying mechanism of this finding is discussed as well.« less

  11. Human phase response curve to a 1 h pulse of bright white light

    PubMed Central

    St Hilaire, Melissa A; Gooley, Joshua J; Khalsa, Sat Bir S; Kronauer, Richard E; Czeisler, Charles A; Lockley, Steven W

    2012-01-01

    The phase resetting response of the human circadian pacemaker to light depends on the timing of exposure and is described by a phase response curve (PRC). The current study aimed to construct a PRC for a 1 h exposure to bright white light (∼8000 lux) and to compare this PRC to a <3 lux dim background light PRC. These data were also compared to a previously completed 6.7 h bright white light PRC and a <15 lux dim background light PRC constructed under similar conditions. Participants were randomized for exposure to 1 h of either bright white light (n= 18) or <3 lux dim background light (n= 18) scheduled at 1 of 18 circadian phases. Participants completed constant routine (CR) procedures in dim light (<3 lux) before and after the light exposure to assess circadian phase. Phase shifts were calculated as the difference in timing of dim light melatonin onset (DLMO) during pre- and post-stimulus CRs. Exposure to 1 h of bright white light induced a Type 1 PRC with a fitted peak-to-trough amplitude of 2.20 h. No discernible PRC was observed in the <3 lux dim background light PRC. The fitted peak-to-trough amplitude of the 1 h bright light PRC was ∼40% of that for the 6.7 h PRC despite representing only 15% of the light exposure duration, consistent with previous studies showing a non-linear duration–response function for the effects of light on circadian resetting. PMID:22547633

  12. Human phase response curve to a 1 h pulse of bright white light.

    PubMed

    St Hilaire, Melissa A; Gooley, Joshua J; Khalsa, Sat Bir S; Kronauer, Richard E; Czeisler, Charles A; Lockley, Steven W

    2012-07-01

    The phase resetting response of the human circadian pacemaker to light depends on the timing of exposure and is described by a phase response curve (PRC). The current study aimed to construct a PRC for a 1 h exposure to bright white light (∼8000 lux) and to compare this PRC to a <3 lux dim background light PRC. These data were also compared to a previously completed 6.7 h bright white light PRC and a <15 lux dim background light PRC constructed under similar conditions. Participants were randomized for exposure to 1 h of either bright white light (n=18) or <3 lux dim background light (n=18) scheduled at 1 of 18 circadian phases. Participants completed constant routine (CR) procedures in dim light (<3 lux) before and after the light exposure to assess circadian phase. Phase shifts were calculated as the difference in timing of dim light melatonin onset (DLMO) during pre- and post-stimulus CRs. Exposure to 1 h of bright white light induced a Type 1 PRC with a fitted peak-to-trough amplitude of 2.20 h. No discernible PRC was observed in the <3 lux dim background light PRC. The fitted peak-to-trough amplitude of the 1 h bright light PRC was ∼40% of that for the 6.7 h PRC despite representing only 15% of the light exposure duration, consistent with previous studies showing a non-linear duration–response function for the effects of light on circadian resetting.

  13. Facultative symbiont infections affect aphid reproduction.

    PubMed

    Simon, Jean-Christophe; Boutin, Sébastien; Tsuchida, Tsutomu; Koga, Ryuichi; Le Gallic, Jean-François; Frantz, Adrien; Outreman, Yannick; Fukatsu, Takema

    2011-01-01

    Some bacterial symbionts alter their hosts reproduction through various mechanisms that enhance their transmission in the host population. In addition to its obligatory symbiont Buchnera aphidicola, the pea aphid Acyrthosiphon pisum harbors several facultative symbionts influencing several aspects of host ecology. Aphids reproduce by cyclical parthenogenesis whereby clonal and sexual reproduction alternate within the annual life cycle. Many species, including the pea aphid, also show variation in their reproductive mode at the population level, with some lineages reproducing by cyclical parthenogenesis and others by permanent parthenogenesis. While the role of facultative symbionts has been well studied during the parthenogenetic phase of their aphid hosts, very little is known on their possible influence during the sexual phase. Here we investigated whether facultative symbionts modulate the capacity to produce sexual forms in various genetic backgrounds of the pea aphid with controlled symbiont composition and also in different aphid genotypes from natural populations with previously characterized infection status and reproductive mode. We found that most facultative symbionts exhibited detrimental effects on their hosts fitness under sex-inducing conditions in comparison with the reference lines. We also showed that the loss of sexual phase in permanently parthenogenetic lineages of A. pisum was not explained by facultative symbionts. Finally, we demonstrated that Spiroplasma infection annihilated the production of males in the host progeny by inducing a male-killing phenotype, an unexpected result for organisms such as aphids that reproduce primarily through clonal reproduction.

  14. Climatic influence of background and volcanic stratosphere aerosol models

    NASA Technical Reports Server (NTRS)

    Deschamps, P. Y.; Herman, M.; Lenoble, J.; Tanre, D.

    1982-01-01

    A simple modelization of the earth atmosphere system including tropospheric and stratospheric aerosols has been derived and tested. Analytical expressions are obtained for the albedo variation due to a thin stratospheric aerosol layer. Also outlined are the physical procedures and the respective influence of the main parameters: aerosol optical thickness, single scattering albedo and asymmetry factor, and sublayer albedo. The method is applied to compute the variation of the zonal and planetary albedos due to a stratospheric layer of background H2SO4 particles and of volcanic ash.

  15. Phase control of a Zeeman-split He-Ne gas laser by variation of the gaseous discharge voltage.

    PubMed

    Shelton, W N; Hunt, R H

    1992-07-20

    Zeeman-split lasers are useful for precise positioning or motion control. In applications that employ such a laser to control closely the position of a moving system, phase noise in the Zeeman frequency is a serious problem. Control of low-frequency phase noise can be obtained through variation of the external magnetic field by way of a solenoid wound around the laser tube. It is the finding in this work that control of the residual higher-frequency noise of a He-Ne laser can be obtained through small variations of the high voltage that is used to effect the gaseous discharge in the laser tube. The application of the present system is to the control of the path difference in a Fourier-transform interferometric spectrometer.

  16. Luminosity variations in several parallel auroral arcs before auroral breakup

    NASA Astrophysics Data System (ADS)

    Safargaleev, V.; Lyatsky, W.; Tagirov, V.

    1997-08-01

    Variation of the luminosity in two parallel auroral arcs before auroral breakup has been studied by using digitised TV-data with high temporal and spatial resolution. The intervals when a new arc appears near already existing one were chosen for analysis. It is shown, for all cases, that the appearance of a new arc is accompanied by fading or disappearance of another arc. We have named these events out-of-phase events, OP. Another type of luminosity variation is characterised by almost simultaneous enhancement of intensity in the both arcs (in-phase event, IP). The characteristic time of IP events is 10-20 s, whereas OP events last about one minute. Sometimes out-of-phase events begin as IP events. The possible mechanisms for OP and IP events are discussed.

  17. Analysis of flow process variation degree and influencing factors in inner Mongolia reach of the Yellow River

    NASA Astrophysics Data System (ADS)

    Jin, S. Y.; Zhang, P.; Zhao, W. R.

    2017-06-01

    The provincial hydrological sections of Shizuishan and Toudaoguai are selected as the object of study to analyze flow process variation degree and influencing factor in Inner Mongolia reach of the Yellow River, according to observe and natural monthly runoff from 1956 to 2013. The result shows that there are three phases of the flow process variation degree of the two sections, namely the year 1956 to 1968, 1969 to 1986 and 1987 to 2013, and which increase by phases. The markings appear to decrease by phases and the marking in Toudaoguai section is lower than that in Shizuishan section. The key reasons of the above features are water consumption of industry and agriculture along the river and reservoir operation of Longyangxia and Liujiaxia.

  18. Snow Water Equivalent Variations across the western United States and its relation to of El Niño Southern Oscillation

    NASA Astrophysics Data System (ADS)

    Miller, W. P.; Thakur, B.; Kalra, A.; Lamb, K. W.; Fayne, J.; Tootle, G. A.; Lakshmi, V.

    2017-12-01

    With the recent increase in global mean temperature Western US has undergone significant decline in snowpack which is the primary source of fresh water for the region. Studies suggests the decline in snowpack also being coupled with different El Niño Southern Oscillation (ENSO) phases. The study includes 1 March, 1 April and 1 May Snow Water Equivalent (SWE) data of 56 years period (1961-2016) for the estimation of long term changes. The current study also estimates monthly snow water equivalent (SWE) variations during different ENSO phases. Mann-Kendall test was utilized for trend detection while the step was evaluated with the Pettitt's test. Kolmogorov - Smirnov test was also utilized to evaluate the differences in the SWE data distribution during different ENSO phases. The results indicated both decreasing trends and decreasing shifts in majority of the SWE stations. The decline in SWE varied with the ENSO phases and also varied spatially following the geography of the region. KS tests suggested northern regions of Western US having variations in cumulative distribution function during El Niño and non- El Niño years as compared to other regions suggesting the northern regions being more impacted by ENSO phases. This analysis can bring insights into the spatiotemporal SWE variations and lead to the better reliability on snowpack for water management issues.

  19. PHASE RELATIONSHIPS OF SOLAR HEMISPHERIC TOROIDAL AND POLOIDAL CYCLES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Muraközy, J., E-mail: murakozy.judit@csfk.mta.hu

    2016-08-01

    The solar northern and southern hemispheres exhibit differences in their intensities and time profiles of the activity cycles. The time variation of these properties was studied in a previous article covering the data from Cycles 12–23. The hemispheric phase lags exhibited a characteristic variation: the leading role was exchanged between hemispheres every four cycles. The present work extends the investigation of this variation using the data of Staudacher and Schwabe in Cycles 1–4 and 7–10 as well as Spörer’s data in Cycle 11. The previously observed variation cannot be clearly recognized using the data of Staudacher, Schwabe, and Spörer. However,more » it is more interesting that the phase lags of the reversals of the magnetic fields at the poles follow the same variations as those of the hemispheric cycles in Cycles 12–23, i.e., one of the hemispheres leads in four cyles and the leading role jumps to the opposite hemisphere in the next four cycles. This means that this variation is a long-term property of the entire solar dynamo mechanism, for both the toroidal and poloidal fields, which hints at an unidentified component of the process responsible for the long-term memory.« less

  20. Influence of variation in mobile phase pH and solute pK(a) with the change of organic modifier fraction on QSRRs of hydrophobicity and RP-HPLC retention of weakly acidic compounds.

    PubMed

    Han, Shu-ying; Liang, Chao; Zou, Kuan; Qiao, Jun-qin; Lian, Hong-zhen; Ge, Xin

    2012-11-15

    The variation in mobile phase pH and ionizable solute dissociation constant (pK(a)) with the change of organic modifier fraction in hydroorganic mobile phase has seemingly been a troublesome problem in studies and applications of reversed phase high performance liquid chromatography (RP-HPLC). Most of the early studies regarding the RP-HPLC of acid-base compounds have to measure the actual pH of the mixed mobile phase rigorously, sometimes bringing difficulties in the practices of liquid chromatographic separation. In this paper, the effect of this variation on the apparent n-octanol/water partition coefficient (K(ow)″) and the related quantitative structure-retention relationship (QSRR) of logK(ow)″ vs. logk(w), the logarithm of retention factor of analytes in neat aqueous mobile phases, was investigated for weakly acidic compounds. This QSRR is commonly used as a classical method for K(ow) measurement by RP-HPLC. The theoretical and experimental derivation revealed that the variation in mobile phase pH and solute pK(a) will not affect the QSRRs of acidic compounds. This conclusion is proved to be suitable for various types of ion-suppressors, i.e., strong acid (perchloric acid), weak acid (acetic acid) and buffer salt (potassium dihydrogen phosphate/phosphoric acid, PBS). The QSRRs of logK(ow)″ vs. logk(w) were modeled by 11 substituted benzoic acids using different types of ion-suppressors in a binary methanol-water mobile phase to confirm our deduction. Although different types of ion-suppressor all can be used as mobile phase pH modifiers, the QSRR model obtained by using perchloric acid as the ion-suppressor was found to have the best result, and the slightly inferior QSRRs were obtained by using acetic acid or PBS as the ion-suppressor. Copyright © 2012 Elsevier B.V. All rights reserved.

  1. An experimental and theoretical evaluation of increased thermal diffusivity phase change devices

    NASA Technical Reports Server (NTRS)

    White, S. P.; Golden, J. O.; Stermole, F. J.

    1972-01-01

    This study was to experimentally evaluate and mathematically model the performance of phase change thermal control devices containing high thermal conductivity metal matrices. Three aluminum honeycomb filters were evaluated at five different heat flux levels using n-oct-adecane as the test material. The system was mathematically modeled by approximating the partial differential equations with a three-dimensional implicit alternating direction technique. The mathematical model predicts the system quite well. All of the phase change times are predicted. The heating of solid phase is predicted exactly while there is some variation between theoretical and experimental results in the liquid phase. This variation in the liquid phase could be accounted for by the fact that there are some heat losses in the cell and there could be some convection in the experimental system.

  2. [Effects of exposure frequency and background information on preferences for photographs of cars in different locations].

    PubMed

    Matsuda, Ken; Kusumi, Takashi; Hosomi, Naohiro; Osa, Atsushi; Miike, Hidetoshi

    2014-08-01

    This study examined the influence of familiarity and novelty on the mere exposure effect while manipulating the presentation of background information. We selected presentation stimuli that integrated cars and backgrounds based on the results of pilot studies. During the exposure phase, we displayed the stimuli successively for 3 seconds, manipulating the background information (same or different backgrounds with each presentation) and exposure frequency (3, 6, and 9 times). In the judgment phase, 18 participants judged the cars in terms of preference, familiarity, and novelty on a 7-point scale. As the number of stimulus presentations increased, the preference for the cars increased during the different background condition and decreased during the same background condition. This increased preference may be due to the increase in familiarity caused by the higher exposure frequency and novelty resulting from the background changes per exposure session. The rise in preference judgments was not seen when cars and backgrounds were presented independently. Therefore, the addition of novel features to each exposure session facilitated the mere exposure effect.

  3. Altitudinal Variation at Duplicated β-Globin Genes in Deer Mice: Effects of Selection, Recombination, and Gene Conversion

    PubMed Central

    Storz, Jay F.; Natarajan, Chandrasekhar; Cheviron, Zachary A.; Hoffmann, Federico G.; Kelly, John K.

    2012-01-01

    Spatially varying selection on a given polymorphism is expected to produce a localized peak in the between-population component of nucleotide diversity, and theory suggests that the chromosomal extent of elevated differentiation may be enhanced in cases where tandemly linked genes contribute to fitness variation. An intriguing example is provided by the tandemly duplicated β-globin genes of deer mice (Peromyscus maniculatus), which contribute to adaptive differentiation in blood–oxygen affinity between high- and low-altitude populations. Remarkably, the two β-globin genes segregate the same pair of functionally distinct alleles due to a history of interparalog gene conversion and alleles of the same functional type are in perfect coupling-phase linkage disequilibrium (LD). Here we report a multilocus analysis of nucleotide polymorphism and LD in highland and lowland mice with different genetic backgrounds at the β-globin genes. The analysis of haplotype structure revealed a paradoxical pattern whereby perfect LD between the two β-globin paralogs (which are separated by 16.2 kb) is maintained in spite of the fact that LD within both paralogs decays to background levels over physical distances of less than 1 kb. The survey of nucleotide polymorphism revealed that elevated levels of altitudinal differentiation at each of the β-globin genes drop away quite rapidly in the external flanking regions (upstream of the 5′ paralog and downstream of the 3′ paralog), but the level of differentiation remains unexpectedly high across the intergenic region. Observed patterns of diversity and haplotype structure are difficult to reconcile with expectations of a two-locus selection model with multiplicative fitness. PMID:22042573

  4. Instantaneous phase estimation to measure weak velocity variations: application to noise correlation on seismic data at the exploration scale

    NASA Astrophysics Data System (ADS)

    Corciulo, M.; Roux, P.; Campillo, M.; Dubucq, D.

    2010-12-01

    Passive imaging from noise cross-correlation is a consolidated analysis applied at continental and regional scale whereas its use at local scale for seismic exploration purposes is still uncertain. The development of passive imaging by cross-correlation analysis is based on the extraction of the Green’s function from seismic noise data. In a completely random field in time and space, the cross-correlation permits to retrieve the complete Green’s function whatever the complexity of the medium. At the exploration scale and at frequency above 2 Hz, the noise sources are not ideally distributed around the stations which strongly affect the extraction of the direct arrivals from the noise cross-correlation process. In order to overcome this problem, the coda waves extracted from noise correlation could be useful. Coda waves describe long and scattered paths sampling the medium in different ways such that they become sensitive to weak velocity variations without being dependent on the noise source distribution. Indeed, scatters in the medium behave as a set of secondary noise sources which randomize the spatial distribution of noise sources contributing to the coda waves in the correlation process. We developed a new technique to measure weak velocity changes based on the computation of the local phase variations (instantaneous phase variation or IPV) of the cross-correlated signals. This newly-developed technique takes advantage from the doublet and stretching techniques classically used to monitor weak velocity variation from coda waves. We apply IPV to data acquired in Northern America (Canada) on a 1-km side square seismic network laid out by 397 stations. Data used to study temporal variations are cross-correlated signals computed on 10-minutes ambient noise in the frequency band 2-5 Hz. As the data set was acquired over five days, about 660 files are processed to perform a complete temporal analysis for each stations pair. The IPV permits to estimate the phase shift all over the signal length without any assumption on the medium velocity. The instantaneous phase is computed using the Hilbert transform of the signal. For each stations pair, we measure the phase difference between successive correlation functions calculated for 10 minutes of ambient noise. We then fit the instantaneous phase shift using a first-order polynomial function. The measure of the velocity variation corresponds to the slope of this fit. Compared to other techniques, the advantage of IPV is a very fast procedure which efficiently provides the measure of velocity variation on large data sets. Both experimental results and numerical tests on synthetic signals will be presented to assess the reliability of the IPV technique, with comparison to the doublet and stretching methods.

  5. Variable Sampling Mapping

    NASA Technical Reports Server (NTRS)

    Smith, Jeffrey, S.; Aronstein, David L.; Dean, Bruce H.; Lyon, Richard G.

    2012-01-01

    The performance of an optical system (for example, a telescope) is limited by the misalignments and manufacturing imperfections of the optical elements in the system. The impact of these misalignments and imperfections can be quantified by the phase variations imparted on light traveling through the system. Phase retrieval is a methodology for determining these variations. Phase retrieval uses images taken with the optical system and using a light source of known shape and characteristics. Unlike interferometric methods, which require an optical reference for comparison, and unlike Shack-Hartmann wavefront sensors that require special optical hardware at the optical system's exit pupil, phase retrieval is an in situ, image-based method for determining the phase variations of light at the system s exit pupil. Phase retrieval can be used both as an optical metrology tool (during fabrication of optical surfaces and assembly of optical systems) and as a sensor used in active, closed-loop control of an optical system, to optimize performance. One class of phase-retrieval algorithms is the iterative transform algorithm (ITA). ITAs estimate the phase variations by iteratively enforcing known constraints in the exit pupil and at the detector, determined from modeled or measured data. The Variable Sampling Mapping (VSM) technique is a new method for enforcing these constraints in ITAs. VSM is an open framework for addressing a wide range of issues that have previously been considered detrimental to high-accuracy phase retrieval, including undersampled images, broadband illumination, images taken at or near best focus, chromatic aberrations, jitter or vibration of the optical system or detector, and dead or noisy detector pixels. The VSM is a model-to-data mapping procedure. In VSM, fully sampled electric fields at multiple wavelengths are modeled inside the phase-retrieval algorithm, and then these fields are mapped to intensities on the light detector, using the properties of the detector and optical system, for comparison with measured data. Ultimately, this model-to-data mapping procedure enables a more robust and accurate way of incorporating the exit-pupil and image detector constraints, which are fundamental to the general class of ITA phase retrieval algorithms.

  6. Photoballistics of volcanic jet activity at Stromboli, Italy

    NASA Technical Reports Server (NTRS)

    Chouet, B.; Hamisevicz, N.; Mcgetchin, T. R.

    1974-01-01

    Two night eruptions of the volcano Stromboli were studied through 70-mm photography. Single-camera techniques were used. Particle sphericity, constant velocity in the frame, and radial symmetry were assumed. Properties of the particulate phase found through analysis include: particle size, velocity, total number of particles ejected, angular dispersion and distribution in the jet, time variation of particle size and apparent velocity distribution, averaged volume flux, and kinetic energy carried by the condensed phase. The frequency distributions of particle size and apparent velocities are found to be approximately log normal. The properties of the gas phase were inferred from the fact that it was the transporting medium for the condensed phase. Gas velocity and time variation, volume flux of gas, dynamic pressure, mass erupted, and density were estimated. A CO2-H2O mixture is possible for the observed eruptions. The flow was subsonic. Velocity variations may be explained by an organ pipe resonance. Particle collimation may be produced by a Magnus effect.

  7. Infrared variation reduction by simultaneous background suppression and target contrast enhancement for deep convolutional neural network-based automatic target recognition

    NASA Astrophysics Data System (ADS)

    Kim, Sungho

    2017-06-01

    Automatic target recognition (ATR) is a traditionally challenging problem in military applications because of the wide range of infrared (IR) image variations and the limited number of training images. IR variations are caused by various three-dimensional target poses, noncooperative weather conditions (fog and rain), and difficult target acquisition environments. Recently, deep convolutional neural network-based approaches for RGB images (RGB-CNN) showed breakthrough performance in computer vision problems, such as object detection and classification. The direct use of RGB-CNN to the IR ATR problem fails to work because of the IR database problems (limited database size and IR image variations). An IR variation-reduced deep CNN (IVR-CNN) to cope with the problems is presented. The problem of limited IR database size is solved by a commercial thermal simulator (OKTAL-SE). The second problem of IR variations is mitigated by the proposed shifted ramp function-based intensity transformation. This can suppress the background and enhance the target contrast simultaneously. The experimental results on the synthesized IR images generated by the thermal simulator (OKTAL-SE) validated the feasibility of IVR-CNN for military ATR applications.

  8. Structure and seasonal variations of the nocturnal mesospheric K layer at Arecibo

    NASA Astrophysics Data System (ADS)

    Yue, Xianchang; Friedman, Jonathan S.; Wu, Xiongbin; Zhou, Qihou H.

    2017-07-01

    We present the seasonal variations of the nocturnal mesospheric potassium (K) layer at Arecibo, Puerto Rico (18.35°N, 66.75°W) from 160 nights of K Doppler lidar observations between December 2003 and January 2010, during which the solar activity is mostly low. The background temperature is also measured simultaneously by the lidar and shows a strong semiannual oscillation with maxima occurring during equinoxes at all altitudes. The annual mean K density profile is approximately Gaussian with a peak altitude of 91.7 km. The K column abundance and the centroid height have strong semiannual variations, with maxima at the solstices. Both parameters are negatively correlated to the mean background temperature with a correlation coefficient < -0.5. The root-mean-square (RMS) width has a distinct annual oscillation with the largest width occurring in May. The seasonal variation of the centroid height is similar to that of the Fe layer at the same site. The seasonal temperature variation indicates significant enhanced wave-induced downward transport for both species during spring and autumn. This explains the metal layer centroid height and column abundance variations at Arecibo and provides a general mechanism to account for the seasonal variations in the centroid height of all metal species measured at low-latitude and midlatitude sites.

  9. Variation in the Visual Habitat May Mediate the Maintenance of Color Polymorphism in a Poeciliid Fish

    PubMed Central

    Hurtado-Gonzales, Jorge L.; Loew, Ellis R.; Uy, J. Albert C.

    2014-01-01

    The conspicuousness of animal signals is influenced by their contrast against the background. As such, signal conspicuousness will tend to vary in nature because habitats are composed of a mosaic of backgrounds. Variation in attractiveness could result in variation in conspecific mate choice and risk of predation, which, in turn, may create opportunities for balancing selection to maintain distinct polymorphisms. We quantified male coloration, the absorbance spectrum of visual pigments and the photic environment of Poecilia parae, a fish species with five distinct male color morphs: a drab (i.e., grey), a striped, and three colorful (i.e., blue, red and yellow) morphs. Then, using physiological models, we assessed how male color patterns can be perceived in their natural visual habitats by conspecific females and a common cichlid predator, Aequidens tetramerus. Our estimates of chromatic and luminance contrasts suggest that the three most colorful morphs were consistently the most conspicuous across all habitats. However, variation in the visual background resulted in variation in which morph was the most conspicuous to females at each locality. Likewise, the most colorful morphs were the most conspicuous morphs to cichlid predators. If females are able to discriminate between conspicuous prospective mates and those preferred males are also more vulnerable to predation, variable visual habitats could influence the direction and strength of natural and sexual selection, thereby allowing for the persistence of color polymorphisms in natural environments. PMID:24987856

  10. Phase Error Correction in Time-Averaged 3D Phase Contrast Magnetic Resonance Imaging of the Cerebral Vasculature

    PubMed Central

    MacDonald, M. Ethan; Forkert, Nils D.; Pike, G. Bruce; Frayne, Richard

    2016-01-01

    Purpose Volume flow rate (VFR) measurements based on phase contrast (PC)-magnetic resonance (MR) imaging datasets have spatially varying bias due to eddy current induced phase errors. The purpose of this study was to assess the impact of phase errors in time averaged PC-MR imaging of the cerebral vasculature and explore the effects of three common correction schemes (local bias correction (LBC), local polynomial correction (LPC), and whole brain polynomial correction (WBPC)). Methods Measurements of the eddy current induced phase error from a static phantom were first obtained. In thirty healthy human subjects, the methods were then assessed in background tissue to determine if local phase offsets could be removed. Finally, the techniques were used to correct VFR measurements in cerebral vessels and compared statistically. Results In the phantom, phase error was measured to be <2.1 ml/s per pixel and the bias was reduced with the correction schemes. In background tissue, the bias was significantly reduced, by 65.6% (LBC), 58.4% (LPC) and 47.7% (WBPC) (p < 0.001 across all schemes). Correction did not lead to significantly different VFR measurements in the vessels (p = 0.997). In the vessel measurements, the three correction schemes led to flow measurement differences of -0.04 ± 0.05 ml/s, 0.09 ± 0.16 ml/s, and -0.02 ± 0.06 ml/s. Although there was an improvement in background measurements with correction, there was no statistical difference between the three correction schemes (p = 0.242 in background and p = 0.738 in vessels). Conclusions While eddy current induced phase errors can vary between hardware and sequence configurations, our results showed that the impact is small in a typical brain PC-MR protocol and does not have a significant effect on VFR measurements in cerebral vessels. PMID:26910600

  11. Sunspot Seismology: Testing Surface Effects with Numerical Simulations

    NASA Astrophysics Data System (ADS)

    Braun, Douglas; Birch, A. C.; Hanasoge, S. M.

    2007-05-01

    The discovery that sunspots absorb acoustic waves was first announced twenty years ago at a previous SPD meeting in Honolulu. A considerable effort has been made to understand the physics of the interaction between acoustic waves and sunspots. However, the implications of this two-decade old discovery are still being explored in helioseismology. An ongoing controversy involves the role of surface effects, including absorption, in modeling the subsurface structure of sunspots. Braun and Birch recently suggested that observed frequency variations, at fixed phase speeds, of acoustic travel-time perturbations through sunspots offers evidence for a strong contribution to travel times from structures with vertical scales smaller than about one Mm near the solar surface. We test this suggestion with the numerical simulations of acoustic-wave propagation hrough specified sound-speed perturbations of a background solar model. An important finding is that travel times measured using helioseismic holography from simulations employing sound-speed perturbations typical of recent time-distance inversions do not predict the strong frequency variations observed in with solar data. We are in the process of evaluating whether shallow sound-speed perturbations, such as that proposed by Fan, Braun and Chou to explain the acoustic scattering propertis of sunspots observed with Hankel analysis, can reproduce the frequency variations observed in sunspots. This work is supported by contracts NAS5-02139, NNH05CC76C and NNH04CC05C from NASA, and grant AST-0406225 from the NSF.

  12. Variation in Second Language Learners' Strategies among Non-Native English Speakers from Three Language/Culture Backgrounds

    ERIC Educational Resources Information Center

    Ebsworth, Miriam Eisenstein; Tang, Frank Lixing; Razavi, Nikta; Aiello, Jacqueline

    2014-01-01

    This study explored the effects of cultural and linguistic background, L2 proficiency, and gender on language learning strategies for 263 college-level learners from Chinese, Russian, and Latino backgrounds. Data based on the SILL (Oxford, 2001) revealed that Russian students used significantly more strategies than the Chinese students in three…

  13. Different Values, Different Skills? A Comparison of Essay Writing by Students from Arts and Science Backgrounds

    ERIC Educational Resources Information Center

    North, Sarah

    2005-01-01

    This article reports the findings of a 3 year research project which investigated disciplinary variation in student writing. Within an Open University course in the history of science, students from an arts background were found to achieve significantly higher grades than those from a science background. Textual and interview data suggest that…

  14. Evaluation of the impact of observations on blended sea surface winds in a two-dimensional variational scheme using degrees of freedom

    NASA Astrophysics Data System (ADS)

    Wang, Ting; Xiang, Jie; Fei, Jianfang; Wang, Yi; Liu, Chunxia; Li, Yuanxiang

    2017-12-01

    This paper presents an evaluation of the observational impacts on blended sea surface winds from a two-dimensional variational data assimilation (2D-Var) scheme. We begin by briefly introducing the analysis sensitivity with respect to observations in variational data assimilation systems and its relationship with the degrees of freedom for signal (DFS), and then the DFS concept is applied to the 2D-Var sea surface wind blending scheme. Two methods, a priori and a posteriori, are used to estimate the DFS of the zonal ( u) and meridional ( v) components of winds in the 2D-Var blending scheme. The a posteriori method can obtain almost the same results as the a priori method. Because only by-products of the blending scheme are used for the a posteriori method, the computation time is reduced significantly. The magnitude of the DFS is critically related to the observational and background error statistics. Changing the observational and background error variances can affect the DFS value. Because the observation error variances are assumed to be uniform, the observational influence at each observational location is related to the background error variance, and the observations located at the place where there are larger background error variances have larger influences. The average observational influence of u and v with respect to the analysis is about 40%, implying that the background influence with respect to the analysis is about 60%.

  15. Can We Predict CME Deflections Based on Solar Magnetic Field Configuration Alone?

    NASA Astrophysics Data System (ADS)

    Kay, C.; Opher, M.; Evans, R. M.

    2013-12-01

    Accurate space weather forecasting requires knowledge of the trajectory of coronal mass ejections (CMEs), including predicting CME deflections close to the Sun and through interplanetary space. Deflections of CMEs occur due to variations in the background magnetic field or solar wind speed, magnetic reconnection, and interactions with other CMEs. Using our newly developed model of CME deflections due to gradients in the background solar magnetic field, ForeCAT (Kay et al. 2013), we explore the questions: (a) do all simulated CMEs ultimately deflect to the minimum in the background solar magnetic field? (b) does the majority of the deflection occur in the lower corona below 4 Rs? ForeCAT does not include temporal variations in the magnetic field of active regions (ARs), spatial variations in the background solar wind speed, magnetic reconnection, or interactions with other CMEs. Therefore we focus on the effects of the steady state solar magnetic field. We explore two different Carrington Rotations (CRs): CR 2029 (April-May 2005) and CR 2077 (November-December 2008). Little is known about how the density and magnetic field fall with distance in the lower corona. We consider four density models derived from observations (Chen 1996, Mann et al. 2003, Guhathakurta et al. 2006, Leblanc et al. 1996) and two magnetic field models (PFSS and a scaled model). ForeCAT includes drag resulting from both CME propagation and deflection through the background solar wind. We vary the drag coefficient to explore the effect of drag on the deflection at 1 AU.

  16. Effect of phase symmetry on the NMR spectrum of acetonitrile oriented in a uniaxial-biaxial-uniaxial phase

    NASA Astrophysics Data System (ADS)

    Deepak, H. S. Vinay; Yelamaggad, C. V.; Khetrapal, C. L.; Ramanathan, K. V.

    2016-09-01

    We report here the measurement of the Csbnd H and the Hsbnd H dipolar couplings of the methyl group of acetonitrile oriented in the biaxial liquid crystal potassium laurate/1-decanol/water system. These parameters show large variations when measured as a function of temperature. The variations follow the symmetry of the phase as the liquid crystal goes through the sequence of uniaxial - biaxial - uniaxial phases and show a close correspondence to the phase changes that occur in the liquid crystalline solvent coinciding with the onset of biaxiality. The Hsbnd Csbnd H bond angle calculated after incorporating vibrational corrections to the dipolar couplings is discussed in terms of contributions in the case of the biaxial liquid crystal arising from vibration-rotation interaction effects.

  17. Characteristics of Quasi-Biennial Oscillation simulation in the Meteorological Research Institute earth system model

    NASA Astrophysics Data System (ADS)

    Yoshida, K.; Naoe, H.

    2016-12-01

    Whether climate models drive Quasi-Biennial Oscillation (QBO) appropriately is important to assess QBO impact on climate change such as global warming and solar related variation. However, there were few models generating QBO in the Coupled Model Intercomparison Project Phase 5 (CMIP5). This study focuses on dynamical structure of the QBO and its sensitivity to background wind pattern and model configuration. We present preliminary results of experiments designed by "Towards Improving the QBO in Global Climate Models (QBOi)", which is derived from the Stratosphere-troposphere processes and their role in climate (SPARC), in the Meteorological Research Institute earth system model, MRI-ESM2. The simulations were performed in present-day climate condition, repeated annual cycle condition with various CO2 level and sea surface temperatures, and QBO hindcast. In the present climate simulation, zonal wind in the equatorial stratosphere generally exhibits realistic behavior of the QBO. Equatorial zonal wind variability associated with QBO is overestimated in upper stratosphere and underestimated in lower stratosphere. In the MRI-ESM2, the QBO behavior is mainly driven by gravity wave drag parametrization (GWDP) introduced in Hines (1997). Comparing to reanalyses, shortage of resolved wave forcing is found especially in equatorial lower stratosphere. These discrepancies can be attributed to difference in wave forcing, background wind pattern and model configuration. We intend to show results of additional sensitivity experiments to examine how model configuration and background wind pattern affect resolved wave source, wave propagation characteristics, and QBO behavior.

  18. [Medical image segmentation based on the minimum variation snake model].

    PubMed

    Zhou, Changxiong; Yu, Shenglin

    2007-02-01

    It is difficult for traditional parametric active contour (Snake) model to deal with automatic segmentation of weak edge medical image. After analyzing snake and geometric active contour model, a minimum variation snake model was proposed and successfully applied to weak edge medical image segmentation. This proposed model replaces constant force in the balloon snake model by variable force incorporating foreground and background two regions information. It drives curve to evolve with the criterion of the minimum variation of foreground and background two regions. Experiments and results have proved that the proposed model is robust to initial contours placements and can segment weak edge medical image automatically. Besides, the testing for segmentation on the noise medical image filtered by curvature flow filter, which preserves edge features, shows a significant effect.

  19. Figures of merit for detectors in digital radiography. II. Finite number of secondaries and structured backgrounds.

    PubMed

    Pineda, Angel R; Barrett, Harrison H

    2004-02-01

    The current paradigm for evaluating detectors in digital radiography relies on Fourier methods. Fourier methods rely on a shift-invariant and statistically stationary description of the imaging system. The theoretical justification for the use of Fourier methods is based on a uniform background fluence and an infinite detector. In practice, the background fluence is not uniform and detector size is finite. We study the effect of stochastic blurring and structured backgrounds on the correlation between Fourier-based figures of merit and Hotelling detectability. A stochastic model of the blurring leads to behavior similar to what is observed by adding electronic noise to the deterministic blurring model. Background structure does away with the shift invariance. Anatomical variation makes the covariance matrix of the data less amenable to Fourier methods by introducing long-range correlations. It is desirable to have figures of merit that can account for all the sources of variation, some of which are not stationary. For such cases, we show that the commonly used figures of merit based on the discrete Fourier transform can provide an inaccurate estimate of Hotelling detectability.

  20. Background and design of the ACCA-EAPCI registry on ST-segment elevation myocardial infarction of the European Society of Cardiology.

    PubMed

    Zeymer, Uwe; Ludman, Peter; Danchin, Nicolas; Kala, Petr; Maggioni, Aldo P; Weidinger, Franz

    2018-02-01

    Treatment of patients with acute ST-segment elevation myocardial infarction has improved over past decades, with reperfusion therapy being the cornerstone in the acute phase. Based on the results of large randomised trials the current ST-segment elevation myocardial infarction guidelines of the European Society of Cardiology (ESC) recommend acute treatments and secondary prevention therapies. However, there are large variations between ESC countries in the treatment of patients presenting with ST-segment elevation myocardial infarction. Therefore the ESC has initiated a prospective registry to evaluate the current treatments and outcomes of these patients with a special focus on adherence to the ESC guidelines and on differences between countries and regions. This paper describes the methodology and design of the ST-segment elevation myocardial infarction registry conducted in collaboration of the Acute Cardiac Care Association and the European Association of Percutaneous Coronary Intervention.

  1. Large scale variation in DNA copy number in chicken breeds

    USDA-ARS?s Scientific Manuscript database

    Background Detecting genetic variation is a critical step in elucidating the molecular mechanisms underlying phenotypic diversity. Until recently, such detection has mostly focused on single nucleotide polymorphisms (SNPs) because of the ease in screening complete genomes. Another type of variant, c...

  2. American lookback option with fixed strike price—2-D parabolic variational inequality

    NASA Astrophysics Data System (ADS)

    Chen, Xiaoshan; Yi, Fahuai; Wang, Lihe

    In this paper we study a 2-dimensional parabolic variational inequality with financial background. We define a suitable weak formula and obtain existence and uniqueness of the problem. Moreover we analyze the behaviors of the free boundary surface.

  3. Background controlled QTL mapping in pure-line genetic populations derived from four-way crosses

    PubMed Central

    Zhang, S; Meng, L; Wang, J; Zhang, L

    2017-01-01

    Pure lines derived from multiple parents are becoming more important because of the increased genetic diversity, the possibility to conduct replicated phenotyping trials in multiple environments and potentially high mapping resolution of quantitative trait loci (QTL). In this study, we proposed a new mapping method for QTL detection in pure-line populations derived from four-way crosses, which is able to control the background genetic variation through a two-stage mapping strategy. First, orthogonal variables were created for each marker and used in an inclusive linear model, so as to completely absorb the genetic variation in the mapping population. Second, inclusive composite interval mapping approach was implemented for one-dimensional scanning, during which the inclusive linear model was employed to control the background variation. Simulation studies using different genetic models demonstrated that the new method is efficient when considering high detection power, low false discovery rate and high accuracy in estimating quantitative trait loci locations and effects. For illustration, the proposed method was applied in a reported wheat four-way recombinant inbred line population. PMID:28722705

  4. Background controlled QTL mapping in pure-line genetic populations derived from four-way crosses.

    PubMed

    Zhang, S; Meng, L; Wang, J; Zhang, L

    2017-10-01

    Pure lines derived from multiple parents are becoming more important because of the increased genetic diversity, the possibility to conduct replicated phenotyping trials in multiple environments and potentially high mapping resolution of quantitative trait loci (QTL). In this study, we proposed a new mapping method for QTL detection in pure-line populations derived from four-way crosses, which is able to control the background genetic variation through a two-stage mapping strategy. First, orthogonal variables were created for each marker and used in an inclusive linear model, so as to completely absorb the genetic variation in the mapping population. Second, inclusive composite interval mapping approach was implemented for one-dimensional scanning, during which the inclusive linear model was employed to control the background variation. Simulation studies using different genetic models demonstrated that the new method is efficient when considering high detection power, low false discovery rate and high accuracy in estimating quantitative trait loci locations and effects. For illustration, the proposed method was applied in a reported wheat four-way recombinant inbred line population.

  5. Little effect of HSP90 inhibition on the quantitative wing traits variation in Drosophila melanogaster.

    PubMed

    Takahashi, Kazuo H

    2017-02-01

    Drosophila wings have been a model system to study the effect of HSP90 on quantitative trait variation. The effect of HSP90 inhibition on environmental buffering of wing morphology varies among studies while the genetic buffering effect of it was examined in only one study and was not detected. Variable results so far might show that the genetic background influences the environmental and genetic buffering effect of HSP90. In the previous studies, the number of the genetic backgrounds used is limited. To examine the effect of HSP90 inhibition with a larger number of genetic backgrounds than the previous studies, 20 wild-type strains of Drosophila melanogaster were used in this study. Here I investigated the effect of HSP90 inhibition on the environmental buffering of wing shape and size by assessing within-individual and among-individual variations, and as a result, I found little or very weak effects on environmental and genetic buffering. The current results suggest that the role of HSP90 as a global regulator of environmental and genetic buffering is limited at least in quantitative traits.

  6. Dental fear among children and adolescents in a multicultural population--a cross-sectional study.

    PubMed

    Fägerstad, Anida; Lundgren, Jesper; Arnrup, Kristina

    2015-01-01

    The aim of this study was to explore dental fear in a multicultural population of child and adolescent dental patients, with background, gender, age, and socioeconomic status taken into account. A specific aim was to investigate whether the level of DF differed between patients with a non- Swedish background and patients with a Swedish background. In conjunction with a routine visit to the dental clinic, 301 patients (8-19 years old) assessed their dental fear on the Children's Fear Survey Schedule - Dental Subscale, using self-ratings. Following an interview protocol, patients' and their parents' country of birth, and parents' education and occupation/employment were registered. An interpreter was present when needed. Self-rated dental fear was almost equal among patients coming from a non-Swedish background and patients with a Swedish background. Girls scored higher than boys and younger children scored slightly higher compared to older children, but the pattern of dental fear variation was inconsistent. Socioeconomic status differed between the groups with a non-Swedish vs. a Swedish background, but no impact on dental fear was revealed. When children and adolescents with a non-Swedish vs. a Swedish background were modelled separately, female gender and younger age had an impact on dental fear only in the group with a Swedish background. No differences in dental fear were found between children and adolescents from non-Swedish vs. Swedish backgrounds. Dental fear variations according to gender and age were more pronounced in the group with a Swedish background compared to the group with a non-Swedish background. No impact of socioeconomic status could be revealed.

  7. Streamline Your Project: A Lifecycle Model.

    ERIC Educational Resources Information Center

    Viren, John

    2000-01-01

    Discusses one approach to project organization providing a baseline lifecycle model for multimedia/CBT development. This variation of the standard four-phase model of Analysis, Design, Development, and Implementation includes a Pre-Analysis phase, called Definition, and a Post-Implementation phase, known as Maintenance. Each phase is described.…

  8. Seasonal and interannual variations of atmospheric CO2 and climate

    NASA Astrophysics Data System (ADS)

    Dettinger, Michael D.; Ghil, Michael

    1998-02-01

    Interannual variations of atmospheric CO2 concentrations at Mauna Loa are almost masked by the seasonal cycle and a strong trend; at the South Pole, the seasonal cycle is small and is almost lost in the trend and interannual variations. Singular-spectrum analysis (SSA) is used here to isolate and reconstruct interannual signals at both sites and to visualize recent decadal changes in the amplitude and phase of the seasonal cycle. Analysis of the Mauna Loa CO2 series illustrates a hastening of the CO2 seasonal cycle, a close temporal relation between Northern Hemisphere (NH) mean temperature trends and the amplitude of the seasonal CO2 cycle, and tentative ties between the latter and seasonality changes in temperature over the NH continents. Variations of the seasonal CO2 cycle at the South Pole differ from those at Mauna Loa: it is phase changes of the seasonal cycle at the South Pole, rather than amplitude changes, that parallel hemispheric and global temperature trends. The seasonal CO2 cycles exhibit earlier occurrences of the seasons by 7days at Mauna Loa and 18days at the South Pole. Interannual CO2 variations are shared at the two locations, appear to respond to tropical processes, and can be decomposed mostly into two periodicities, around (3years)-1 and (4years)-1, respectively. Joint SSA analyses of CO2 concentrations and tropical climate indices isolate a shared mode with a quasi-triennial (QT) period in which the CO2 and sea-surface temperature (SST) participation are in phase opposition. The other shared mode has a quasi-quadrennial (QQ) period and CO2 variations are in phase with the corresponding tropical SST variations throughout the tropics. Together these interannual modes exhibit a mean lag between tropical SSTs and CO2 variations of about 6 8months, with SST leading. Analysis of the QT and QQ signals in global gridded SSTs, joint SSA of CO2 and δ13C isotopic ratios, and SSA of CO2 and NH-land temperatures indicate that the QT variations in CO2 mostly reflect upwelling variations in the eastern tropical Pacific. QQ variations are dominated by the CO2 signature of terrestrial-ecosystem response to global QQ climate variations. Climate variations associated with these two interannual components of tropical variability have very different effects on global climate and, especially, on terrestrial ecosystems and the carbon cycle.

  9. Is objective and accurate cognitive assessment across the menstrual cycle possible? A feasibility study

    PubMed Central

    Neill, Jo; Scally, Andy; Tuffnell, Derek; Marshall, Kay

    2015-01-01

    Objectives: Variation in plasma hormone levels influences the neurobiology of brain regions involved in cognition and emotion processing. Fluctuations in hormone levels across the menstrual cycle could therefore alter cognitive performance and wellbeing; reports have provided conflicting results, however. The aim of this study was to assess whether objective assessment of cognitive performance and self-reported wellbeing during the follicular and luteal phases of the menstrual cycle is feasible and investigate the possible reasons for variation in effects previously reported. Methods: The Cambridge Neuropsychological Test Automated Battery and Edinburgh Postnatal Depression Scale were used to assess the cognitive performance and wellbeing of 12 women. Data were analysed by self-reported and hormone-estimated phases of the menstrual cycle. Results: Recruitment to the study and assessment of cognition and wellbeing was without issue. Plasma hormone and peptide estimation showed substantial individual variation and suggests inaccuracy in self-reported menstrual phase estimation. Conclusion: Objective assessment of cognitive performance and self-assessed wellbeing across the menstrual cycle is feasible. Grouping data by hormonal profile rather by self-reported phase estimation may influence phase-mediated results. Future studies should use plasma hormone and peptide profiles to estimate cycle phase and group data for analyses. PMID:26770760

  10. Broadband Spectroscopy Using Two Suzaku Observations of the HMXB GX 301-2

    NASA Technical Reports Server (NTRS)

    Suchy, Slawomir; Fuerst, Felix; Pottschmidt, Katja; Caballero, Isabel; Kreykenbohm, Ingo; Wilms, Joern; Markowitz, Alex; Rothschild, Richard E.

    2012-01-01

    We present the analysis of two Suzaku observations of GX 301-2 at two orbital phases after the periastron passage. Variations in the column density of the line-of-sight absorber are observed, consistent with accretion from a clumpy wind. In addition to a CRSF, multiple fluorescence emission lines were detected in both observations. The variations in the pulse profiles and the CRSF throughout the pulse phase have a signature of a magnetic dipole field. Using a simple dipole model we calculated the expected magnetic field values for different pulse phases and were able to extract a set of geometrical angles, loosely constraining the dipole geometry in the neutron star. From the variation of the CRSF width and energy, we found a geometrical solution for the dipole, making the inclination consistent with previously published values.

  11. Broadband Spectroscopy Using Two Suzaku Observations of the HMXB GX 301-2

    NASA Astrophysics Data System (ADS)

    Suchy, Slawomir; Fürst, Felix; Pottschmidt, Katja; Caballero, Isabel; Kreykenbohm, Ingo; Wilms, Jörn; Markowitz, Alex; Rothschild, Richard E.

    2012-02-01

    We present the analysis of two Suzaku observations of GX 301-2 at two orbital phases after the periastron passage. Variations in the column density of the line-of-sight absorber are observed, consistent with accretion from a clumpy wind. In addition to a cyclotron resonance scattering feature (CRSF), multiple fluorescence emission lines were detected in both observations. The variations in the pulse profiles and the CRSF throughout the pulse phase have a signature of a magnetic dipole field. Using a simple dipole model we calculated the expected magnetic field values for different pulse phases and were able to extract a set of geometrical angles, loosely constraining the dipole geometry in the neutron star. From the variation of the CRSF width and energy, we found a geometrical solution for the dipole, making the inclination consistent with previously published values.

  12. The latitude-height structure of 40-50 day variations in atmospheric angular momentum

    NASA Technical Reports Server (NTRS)

    Anderson, J. R.; Rosen, R. D.

    1983-01-01

    Using five years of U.S. National Meteorological Center twice-daily global analyses, a description of the two-dimensional latitude-height structure of the winds responsible for quasi-periodic variations in the relative angular momentum of the atmosphere observed by Langley et al. (1981) is constructed. Cross-spectral and amplitude phase eigenvector techniques indicate that these variations are associated with wave-like motions in the tropical upper troposphere which propagate poleward and downward in phase within the tropics. The tropical component is suggested to be the zonally averaged part of the motions described by Madden and Julian (1971, 1972), while a Northern Hemisphere midlatitude component whose phase is essentially independent of height may be a direct response to the tropical motions. Alternatively, both motions may be the common response to an as yet unidentified tropical forcing.

  13. Gait analysis in children with haemophilia: first Italian experience at the Turin Haemophilia Centre.

    PubMed

    Forneris, E; Andreacchio, A; Pollio, B; Mannucci, C; Franchini, M; Mengoli, C; Pagliarino, M; Messina, M

    2016-05-01

    To investigate the functional status in haemophilia patients referred to an Italian paediatric haemophilia centre using gait analysis, verifying any differences between mild, moderate or severe haemophilia at a functional level. Forty-two patients (age 4-18) presenting to the Turin Paediatric Haemophilia Centre who could walk independently were included. Therapy included prophylaxis (n = 21), on-demand (n = 17) or immune tolerance induction + inhibitor (n = 4). Patients performed a test of gait analysis. Temporal, spatial and kinematic parameters were calculated for patient subgroups by disease severity and background treatment, and compared with normal values. Moderate (35.7%) or severe (64.3%) haemophilia patients showed obvious variations from normal across a variety of temporal and spatial gait analysis parameters, including step speed and length, double support, swing phase, load asymmetry, stance phase, swing phase and speed. Kinematic parameters were characterized by frequent foot external rotation with deficient plantar flexion during the stance phase, retropelvic tilt, impaired power generation distally and reduced ground reaction forces. Both Gait Deviation Index and Gait Profile Score values for severe haemophilia patients indicated abnormal gait parameters, which were worst in patients with a history of past or current use of inhibitors and those receiving on-demand therapy. Functional evaluation identified changes in gait pattern in patients with severe and moderate haemophilia, compared with normal values. Gait analysis may be a useful tool to facilitate early diagnosis of joint damage, prevent haemophilic arthropathy, design a personalized rehabilitative treatment and monitor functional status over time. © 2016 John Wiley & Sons Ltd.

  14. Adaptive DSPI phase denoising using mutual information and 2D variational mode decomposition

    NASA Astrophysics Data System (ADS)

    Xiao, Qiyang; Li, Jian; Wu, Sijin; Li, Weixian; Yang, Lianxiang; Dong, Mingli; Zeng, Zhoumo

    2018-04-01

    In digital speckle pattern interferometry (DSPI), noise interference leads to a low peak signal-to-noise ratio (PSNR) and measurement errors in the phase map. This paper proposes an adaptive DSPI phase denoising method based on two-dimensional variational mode decomposition (2D-VMD) and mutual information. Firstly, the DSPI phase map is subjected to 2D-VMD in order to obtain a series of band-limited intrinsic mode functions (BLIMFs). Then, on the basis of characteristics of the BLIMFs and in combination with mutual information, a self-adaptive denoising method is proposed to obtain noise-free components containing the primary phase information. The noise-free components are reconstructed to obtain the denoising DSPI phase map. Simulation and experimental results show that the proposed method can effectively reduce noise interference, giving a PSNR that is higher than that of two-dimensional empirical mode decomposition methods.

  15. Thermal Phase Variations of WASP-12b: Defying Predictions

    NASA Technical Reports Server (NTRS)

    Cowan, Nicolas B.; Machalek, Pavel; Croll, Bryce; Shekhtman, Louis M.; Burrows, Adam; Deming, Drake; Greene, Tom; Hora, Joseph L.

    2012-01-01

    We report Warm Spitzer full-orbit phase observations of WASP-12b at 3.6 and 4.5 micrometers. This extremely inflated hot Jupiter is thought to be overflowing its Roche lobe, undergoing mass loss and accretion onto its host star, and has been claimed to have a C/O ratio in excess of unity. We are able to measure the transit depths, eclipse depths, thermal and ellipsoidal phase variations at both wavelengths. The large-amplitude phase variations, combined with the planet's previously measured dayside spectral energy distribution, are indicative of non-zero Bond albedo and very poor day-night heat redistribution. The transit depths in the mid-infrared-(R(sub p)/R(sub *))(sup 2) = 0.0123(3) and 0.0111(3) at 3.6 and 4.5 micrometers, respectively-indicate that the atmospheric opacity is greater at 3.6 than at 4.5 micrometers, in disagreement with model predictions, irrespective of C/O ratio. The secondary eclipse depths are consistent with previous studies: F(sub day)/F(sub *) = 0.0038(4) and 0.0039(3) at 3.6 and 4.5 micrometers, respectively. We do not detect ellipsoidal variations at 3.6 micrometers, but our parameter uncertainties-estimated via prayer-bead Monte Carlo-keep this non-detection consistent with model predictions. At 4.5 micrometers, on the other hand, we detect ellipsoidal variations that are much stronger than predicted. If interpreted as a geometric effect due to the planet's elongated shape, these variations imply a 3:2 ratio for the planet's longest:shortest axes and a relatively bright day-night terminator. If we instead presume that the 4.5 micrometer ellipsoidal variations are due to uncorrected systematic noise and we fix the amplitude of the variations to zero, the best-fit 4.5 micrometer transit depth becomes commensurate with the 3.6 micrometer depth, within the uncertainties. The relative transit depths are then consistent with a solar composition and short scale height at the terminator. Assuming zero ellipsoidal variations also yields a much deeper 4.5 micrometer eclipse depth, consistent with a solar composition and modest temperature inversion. We suggest future observations that could distinguish between these two scenarios.

  16. Thermal Phase Variations of WASP-12b: Defying Predictions

    NASA Astrophysics Data System (ADS)

    Cowan, Nicolas B.; Machalek, Pavel; Croll, Bryce; Shekhtman, Louis M.; Burrows, Adam; Deming, Drake; Greene, Tom; Hora, Joseph L.

    2012-03-01

    We report Warm Spitzer full-orbit phase observations of WASP-12b at 3.6 and 4.5 μm. This extremely inflated hot Jupiter is thought to be overflowing its Roche lobe, undergoing mass loss and accretion onto its host star, and has been claimed to have a C/O ratio in excess of unity. We are able to measure the transit depths, eclipse depths, thermal and ellipsoidal phase variations at both wavelengths. The large-amplitude phase variations, combined with the planet's previously measured dayside spectral energy distribution, are indicative of non-zero Bond albedo and very poor day-night heat redistribution. The transit depths in the mid-infrared—(Rp /R *)2 = 0.0123(3) and 0.0111(3) at 3.6 and 4.5 μm, respectively—indicate that the atmospheric opacity is greater at 3.6 than at 4.5 μm, in disagreement with model predictions, irrespective of C/O ratio. The secondary eclipse depths are consistent with previous studies: F day/F * = 0.0038(4) and 0.0039(3) at 3.6 and 4.5 μm, respectively. We do not detect ellipsoidal variations at 3.6 μm, but our parameter uncertainties—estimated via prayer-bead Monte Carlo—keep this non-detection consistent with model predictions. At 4.5 μm, on the other hand, we detect ellipsoidal variations that are much stronger than predicted. If interpreted as a geometric effect due to the planet's elongated shape, these variations imply a 3:2 ratio for the planet's longest:shortest axes and a relatively bright day-night terminator. If we instead presume that the 4.5 μm ellipsoidal variations are due to uncorrected systematic noise and we fix the amplitude of the variations to zero, the best-fit 4.5 μm transit depth becomes commensurate with the 3.6 μm depth, within the uncertainties. The relative transit depths are then consistent with a solar composition and short scale height at the terminator. Assuming zero ellipsoidal variations also yields a much deeper 4.5 μm eclipse depth, consistent with a solar composition and modest temperature inversion. We suggest future observations that could distinguish between these two scenarios.

  17. Dual-wavelength digital holographic imaging with phase background subtraction

    NASA Astrophysics Data System (ADS)

    Khmaladze, Alexander; Matz, Rebecca L.; Jasensky, Joshua; Seeley, Emily; Holl, Mark M. Banaszak; Chen, Zhan

    2012-05-01

    Three-dimensional digital holographic microscopic phase imaging of objects that are thicker than the wavelength of the imaging light is ambiguous and results in phase wrapping. In recent years, several unwrapping methods that employed two or more wavelengths were introduced. These methods compare the phase information obtained from each of the wavelengths and extend the range of unambiguous height measurements. A straightforward dual-wavelength phase imaging method is presented which allows for a flexible tradeoff between the maximum height of the sample and the amount of noise the method can tolerate. For highly accurate phase measurements, phase unwrapping of objects with heights higher than the beat (synthetic) wavelength (i.e. the product of the original two wavelengths divided by their difference), can be achieved. Consequently, three-dimensional measurements of a wide variety of biological systems and microstructures become technically feasible. Additionally, an effective method of removing phase background curvature based on slowly varying polynomial fitting is proposed. This method allows accurate volume measurements of several small objects with the same image frame.

  18. Response of predatory mites to a herbivore-induced plant volatile: genetic variation for context-dependent behaviour.

    PubMed

    Sznajder, Beata; Sabelis, Maurice W; Egas, Martijn

    2010-07-01

    Plants infested with herbivores release specific volatile compounds that are known to recruit natural enemies. The response of natural enemies to these volatiles may be either learned or genetically determined. We asked whether there is genetic variation in the response of the predatory mite Phytoseiulus persimilis to methyl salicylate (MeSa). MeSa is a volatile compound consistently produced by plants being attacked by the two-spotted spider mite, the prey of P. persimilis. We predicted that predators express genetically determined responses during long-distance migration where previously learned associations may have less value. Additionally, we asked whether these responses depend on odors from uninfested plants as a background to MeSa. To infer a genetic basis, we analyzed the variation in response to MeSa among iso-female lines of P. persimilis by using choice-tests that involved either (1) MeSa presented as a single compound or (2) MeSa with background-odor from uninfested lima bean plants. These tests were conducted for starved and satiated predators, i.e., two physiological states, one that approximates migration and another that mimics local patch exploration. We found variation among iso-female lines in the responses to MeSa, thus showing genetic variation for this behavior. The variation was more pronounced in the starved predators, thus indicating that P. persimilis relies on innate preferences when migrating. Background volatiles of uninfested plants changed the predators' responses to MeSa in a manner that depended on physiological state and iso-female line. Thus, it is possible to select for context-dependent behavioral responses of natural enemies to plant volatiles.

  19. Response of Predatory Mites to a Herbivore-Induced Plant Volatile: Genetic Variation for Context-Dependent Behaviour

    PubMed Central

    Sabelis, Maurice W.; Egas, Martijn

    2010-01-01

    Plants infested with herbivores release specific volatile compounds that are known to recruit natural enemies. The response of natural enemies to these volatiles may be either learned or genetically determined. We asked whether there is genetic variation in the response of the predatory mite Phytoseiulus persimilis to methyl salicylate (MeSa). MeSa is a volatile compound consistently produced by plants being attacked by the two-spotted spider mite, the prey of P. persimilis. We predicted that predators express genetically determined responses during long-distance migration where previously learned associations may have less value. Additionally, we asked whether these responses depend on odors from uninfested plants as a background to MeSa. To infer a genetic basis, we analyzed the variation in response to MeSa among iso-female lines of P. persimilis by using choice-tests that involved either (1) MeSa presented as a single compound or (2) MeSa with background-odor from uninfested lima bean plants. These tests were conducted for starved and satiated predators, i.e., two physiological states, one that approximates migration and another that mimics local patch exploration. We found variation among iso-female lines in the responses to MeSa, thus showing genetic variation for this behavior. The variation was more pronounced in the starved predators, thus indicating that P. persimilis relies on innate preferences when migrating. Background volatiles of uninfested plants changed the predators’ responses to MeSa in a manner that depended on physiological state and iso-female line. Thus, it is possible to select for context-dependent behavioral responses of natural enemies to plant volatiles. PMID:20574785

  20. Determining the degree of synchronism for intermittent phase synchronization in human electroencephalography data

    NASA Astrophysics Data System (ADS)

    Koloskova, A. D.; Moskalenko, O. I.

    2017-05-01

    The phenomenon of intermittent phase synchronization during development of epileptic activity in human beings has been discovered based on EEG data. The presence of synchronous behavior phases has been detected both during spike-wave discharges and in the regions of background activity of the brain. The degree of synchronism in the intermittent phase-synchronization regime in both cases has been determined, and it has been established that spike-wave discharges are characterized by a higher degree of synchronism than exists in the regions of background activity of the brain. To determine the degree of synchronism, a modified method of evaluating zero conditional Lyapunov exponents from time series is proposed.

  1. Monitoring In Vivo Changes in Tonic Extracellular Dopamine Level by Charge-Balancing Multiple Waveform Fast-Scan Cyclic Voltammetry.

    PubMed

    Oh, Yoonbae; Park, Cheonho; Kim, Do Hyoung; Shin, Hojin; Kang, Yu Min; DeWaele, Mark; Lee, Jeyeon; Min, Hoon-Ki; Blaha, Charles D; Bennet, Kevin E; Kim, In Young; Lee, Kendall H; Jang, Dong Pyo

    2016-11-15

    Dopamine (DA) modulates central neuronal activity through both phasic (second to second) and tonic (minutes to hours) terminal release. Conventional fast-scan cyclic voltammetry (FSCV), in combination with carbon fiber microelectrodes, has been used to measure phasic DA release in vivo by adopting a background subtraction procedure to remove background capacitive currents. However, measuring tonic changes in DA concentrations using conventional FSCV has been difficult because background capacitive currents are inherently unstable over long recording periods. To measure tonic changes in DA concentrations over several hours, we applied a novel charge-balancing multiple waveform FSCV (CBM-FSCV), combined with a dual background subtraction technique, to minimize temporal variations in background capacitive currents. Using this method, in vitro, charge variations from a reference time point were nearly zero for 48 h, whereas with conventional background subtraction, charge variations progressively increased. CBM-FSCV also demonstrated a high selectivity against 3,4-dihydroxyphenylacetic acid and ascorbic acid, two major chemical interferents in the brain, yielding a sensitivity of 85.40 ± 14.30 nA/μM and limit of detection of 5.8 ± 0.9 nM for DA while maintaining selectivity. Recorded in vivo by CBM-FSCV, pharmacological inhibition of DA reuptake (nomifensine) resulted in a 235 ± 60 nM increase in tonic extracellular DA concentrations, while inhibition of DA synthesis (α-methyl-dl-tyrosine) resulted in a 72.5 ± 4.8 nM decrease in DA concentrations over a 2 h period. This study showed that CBM-FSCV may serve as a unique voltammetric technique to monitor relatively slow changes in tonic extracellular DA concentrations in vivo over a prolonged time period.

  2. A MODEL FOR THERMAL PHASE VARIATIONS OF CIRCULAR AND ECCENTRIC EXOPLANETS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cowan, Nicolas B.; Agol, Eric, E-mail: n-cowan@northwestern.edu

    2011-01-10

    We present a semi-analytic model atmosphere for close-in exoplanets that captures the essential physics of phase curves: orbital and viewing geometry, advection, and re-radiation. We calibrate the model with the well-characterized transiting planet, HD 189733b, then compute light curves for seven of the most eccentric transiting planets: Gl 436b, HAT-P-2b, HAT-P-11b, HD 17156b, HD 80606b, WASP-17b, and XO-3b. We present phase variations for a variety of different radiative times and wind speeds. In the limit of instant re-radiation, the light-curve morphology is entirely dictated by the planet's eccentricity and argument of pericenter: the light curve maximum leads or trails themore » eclipse depending on whether the planet is receding from or approaching the star at superior conjunction, respectively. For a planet with non-zero radiative timescales, the phase peak occurs early for super-rotating winds, and late for sub-rotating winds. We find that for a circular orbit, the timing of the phase variation maximum with respect to superior conjunction indicates the direction of the dominant winds, but cannot break the degeneracy between wind speed and radiative time. For circular planets the phase minimum occurs half an orbit away from the phase maximum-despite the fact that the coolest longitudes are always near the dawn terminator-and therefore does not convey any additional information. In general, increasing the advective frequency or the radiative time has the effect of reducing the peak-to-trough amplitude of phase variations, but there are interesting exceptions to these trends. Lastly, eccentric planets with orbital periods significantly longer than their radiative time exhibit 'ringing', whereby the hot spot generated at periastron rotates in and out of view. The existence of ringing makes it possible to directly measure the wind speed (the frequency of the ringing) and the radiative time constant (the damping of the ringing).« less

  3. High quality 4D cone-beam CT reconstruction using motion-compensated total variation regularization

    NASA Astrophysics Data System (ADS)

    Zhang, Hua; Ma, Jianhua; Bian, Zhaoying; Zeng, Dong; Feng, Qianjin; Chen, Wufan

    2017-04-01

    Four dimensional cone-beam computed tomography (4D-CBCT) has great potential clinical value because of its ability to describe tumor and organ motion. But the challenge in 4D-CBCT reconstruction is the limited number of projections at each phase, which result in a reconstruction full of noise and streak artifacts with the conventional analytical algorithms. To address this problem, in this paper, we propose a motion compensated total variation regularization approach which tries to fully explore the temporal coherence of the spatial structures among the 4D-CBCT phases. In this work, we additionally conduct motion estimation/motion compensation (ME/MC) on the 4D-CBCT volume by using inter-phase deformation vector fields (DVFs). The motion compensated 4D-CBCT volume is then viewed as a pseudo-static sequence, of which the regularization function was imposed on. The regularization used in this work is the 3D spatial total variation minimization combined with 1D temporal total variation minimization. We subsequently construct a cost function for a reconstruction pass, and minimize this cost function using a variable splitting algorithm. Simulation and real patient data were used to evaluate the proposed algorithm. Results show that the introduction of additional temporal correlation along the phase direction can improve the 4D-CBCT image quality.

  4. Buoyancy under Control: Underwater Locomotor Performance in a Deep Diving Seabird Suggests Respiratory Strategies for Reducing Foraging Effort

    PubMed Central

    Cook, Timothée R.; Kato, Akiko; Tanaka, Hideji; Ropert-Coudert, Yan; Bost, Charles-André

    2010-01-01

    Background Because they have air stored in many body compartments, diving seabirds are expected to exhibit efficient behavioural strategies for reducing costs related to buoyancy control. We study the underwater locomotor activity of a deep-diving species from the Cormorant family (Kerguelen shag) and report locomotor adjustments to the change of buoyancy with depth. Methodology/Principal Findings Using accelerometers, we show that during both the descent and ascent phases of dives, shags modelled their acceleration and stroking activity on the natural variation of buoyancy with depth. For example, during the descent phase, birds increased swim speed with depth. But in parallel, and with a decay constant similar to the one in the equation explaining the decrease of buoyancy with depth, they decreased foot-stroke frequency exponentially, a behaviour that enables birds to reduce oxygen consumption. During ascent, birds also reduced locomotor cost by ascending passively. We considered the depth at which they started gliding as a proxy to their depth of neutral buoyancy. This depth increased with maximum dive depth. As an explanation for this, we propose that shags adjust their buoyancy to depth by varying the amount of respiratory air they dive with. Conclusions/Significance Calculations based on known values of stored body oxygen volumes and on deep-diving metabolic rates in avian divers suggest that the variations of volume of respiratory oxygen associated with a respiration mediated buoyancy control only influence aerobic dive duration moderately. Therefore, we propose that an advantage in cormorants - as in other families of diving seabirds - of respiratory air volume adjustment upon diving could be related less to increasing time of submergence, through an increased volume of body oxygen stores, than to reducing the locomotor costs of buoyancy control. PMID:20352122

  5. On the occurrence and strength of multi-frequency multi-GNSS Ionospheric Scintillations in Indian sector during declining phase of solar cycle 24

    NASA Astrophysics Data System (ADS)

    Srinivasu, V. K. D.; Dashora, N.; Prasad, D. S. V. V. D.; Niranjan, K.; Gopi Krishna, S.

    2018-04-01

    This study presents unique perspectives of occurrence and strength of low latitude ionospheric scintillations on multiple signals of Global Navigation Satellite System (GNSS) and its frequency dependence using continuous observation records of 780 nights. A robust comparative analysis is performed using scintillation index, S4 and its variation during pre-midnight and post-midnight duration from a GNSS receiver located at Waltair (17.7°N, 83.3°E), India, covering period from July 2014 to August 2016. The results, generally exhibit the impact of declining phase of solar cycle 24 on occurrence and strength of scintillations, which, however, is evidently different over different frequencies transmitted from different GNSS systems. A deeper quantitative analysis uniquely reveals that apart from the solar cycle and seasonal effects, the number of visible satellites of a selected GNSS markedly affect the occurrence and also the strength. Processing scheme of adopting 6 hourly time windows of pre-midnight and post-midnight brought a novel result that the strength and occurrence of strong scintillations decrease with declining solar activity during pre-midnight hours but remarkably increase for moderate and weak scintillations during post-midnight. The physical processes that dominate the post-midnight equatorial ionosphere are invoked to explain such variations that are special during declining solar activity. Finally, inter-GNSS signal analysis in terms of the effect of strong, moderate and weak scintillations is presented with due consideration of number of satellite passes affected and frequency dependence of mean S4. The quantitative results of this study emphasize for the first time effect of low latitude scintillation on GNSS signals in Indian zone under changing background solar and seasonal conditions.

  6. A total variation diminishing finite difference algorithm for sonic boom propagation models

    NASA Technical Reports Server (NTRS)

    Sparrow, Victor W.

    1993-01-01

    It is difficult to accurately model the rise phases of sonic boom waveforms with traditional finite difference algorithms because of finite difference phase dispersion. This paper introduces the concept of a total variation diminishing (TVD) finite difference method as a tool for accurately modeling the rise phases of sonic booms. A standard second order finite difference algorithm and its TVD modified counterpart are both applied to the one-way propagation of a square pulse. The TVD method clearly outperforms the non-TVD method, showing great potential as a new computational tool in the analysis of sonic boom propagation.

  7. High-pressure behavior of methylammonium lead iodide (MAPbI3) hybrid perovskite

    NASA Astrophysics Data System (ADS)

    Capitani, Francesco; Marini, Carlo; Caramazza, Simone; Postorino, Paolo; Garbarino, Gaston; Hanfland, Michael; Pisanu, Ambra; Quadrelli, Paolo; Malavasi, Lorenzo

    2016-05-01

    In this paper we provide an accurate high-pressure structural and optical study of the MAPbI3 hybrid perovskite. Structural data show the presence of a phase transition toward an orthorhombic structure around 0.3 GPa followed by full amorphization of the system above 3 GPa. After releasing the pressure, the system keeps the high-pressure orthorhombic phase. The occurrence of these structural transitions is further confirmed by pressure induced variations of the photoluminescence signal at high pressure. These variations clearly indicate that the bandgap value and the electronic structure of MAPI change across the phase transition.

  8. Finding binaries from phase modulation of pulsating stars with Kepler

    NASA Astrophysics Data System (ADS)

    Shibahashi, Hiromoto; Murphy, Simon; Bedding, Tim

    2017-09-01

    Binary orbital motion causes a periodic variation in the path length travelled by light emitted from a star towards us. Hence, if the star is pulsating, the observed phase of the pulsation varies over the orbit. Conversely, once we have observed such phase variation, we can extract information about the binary orbit from photometry alone. Continuous and precise space-based photometry has made it possible to measure these light travel time effects on the pulsating stars in binary systems. This opens up a new way of finding unseen brown dwarfs, planets, or massive compact stellar remnants: neutron stars and black holes.

  9. Sensitivity of a Wave Structure to Initial Conditions

    NASA Technical Reports Server (NTRS)

    Duval, Walter M. B.; Duval, Walter M. B. (Technical Monitor)

    2000-01-01

    Microgravity experiments aimed at quantifying effects of gentler via controlled sinusoidal forcing transmitted on the interface between two miscible liquids have shown the evolution of a quasi -stationary four-mode wave structure oriented vertically. The sensitivity of the wave structure to phase angle variation is investigated computationally. We show that a slight variation of the phase angle is sufficient to cause a bifurcation to a two-mode structure. The dependence of phase angle on wave structure is attributed to sensitivity on initial conditions due to the strong nonlinearity of the coupled field equations for the parametric space of interest.

  10. Serotonin and Early Cognitive Development: Variation in the Tryptophan Hydroxylase 2 Gene Is Associated with Visual Attention in 7-Month-Old Infants

    ERIC Educational Resources Information Center

    Leppanen, Jukka M.; Peltola, Mikko J.; Puura, Kaija; Mantymaa, Mirjami; Mononen, Nina; Lehtimaki, Terho

    2011-01-01

    Background: Allelic variation in the promoter region of a gene that encodes tryptophan hydroxylase isoform 2 (TPH2), a rate-limiting enzyme of serotonin synthesis in the central nervous system, has been associated with variations in cognitive function and vulnerability to affective spectrum disorders. Little is known about the effects of this gene…

  11. Modeling Speech Level as a Function of Background Noise Level and Talker-to-Listener Distance for Talkers Wearing Hearing Protection Devices

    ERIC Educational Resources Information Center

    Bouserhal, Rachel E.; Bockstael, Annelies; MacDonald, Ewen; Falk, Tiago H.; Voix, Jérémie

    2017-01-01

    Purpose: Studying the variations in speech levels with changing background noise level and talker-to-listener distance for talkers wearing hearing protection devices (HPDs) can aid in understanding communication in background noise. Method: Speech was recorded using an intra-aural HPD from 12 different talkers at 5 different distances in 3…

  12. Phase relations of natural 65 year SST variations, ocean sea level variations over 260 years, and Arctic sea-ice retreat of the satellite era - issues of cause and effect.

    NASA Astrophysics Data System (ADS)

    Asten, Michael

    2017-04-01

    We study sea level variations over the past 300yr in order to quantify what fraction of variations may be considered cyclic, and what phase relations exist with respect to those cycles. The 64yr cycle detected by Chambers et al (2012) is found in the 1960-2000 data set which Hamlington et al (2013) interpreted as an expression of the PDO; we show that fitting a 64yr cycle is a better fit, accounting for 92% of variance. In a 300yr GMSL tide guage record Jeverejeva et al (2008) identified a 60-65yr cycle superimposed on an upward trend from 1800CE. Using break-points and removal of centennial trends identified by Kemp et al (2015), we produce a detrended GMSL record for 1700-2000CE which emphasizes the 60-65yr oscillations. A least-square fit using a 64yr period cosine yields an amplitude 12mm and origin at year 1958.6, which accounts for 30% of the variance. A plot of the cosine against the entire length of the 300yr detrended GMSL record shows a clear phase lock for the interval 1740 to 2000CE, denoting either a very consistent timing of an internally generated natural variation, or adding to evidence for an external forcing of astronomical origin (Scafetta 2012, 2013). Barcikowska et al (2016) have identified a 65yr cyclic variation in sea surface temperature in the first multidecadal component of Multi- Channel Singular Spectrum Analysis (MSSA) on the Hadley SST data set (RC60). A plot of RC60 versus our fitted cosine shows the phase shift to be 16 yr, close to a 90 degree phase lag of GMSL relative to RC60. This is the relation to be expected for a simple low-pass or integrating filter, which suggests that cyclic natural variations in sea-surface temperature drive similar variations in GMSL. We compare the extent of Arctic sea-ice using the time interval of 1979- 2016 (window of satellite imagery). The decrease in summer ice cover has been subject of many predictions as to when summer ice will reach zero. The plot of measured ice area can be fitted with many speculative curves, and we show three such best fit curves, a parabola (zero ice cover by 2028), a linear fit (zero by 2060) and a 64yr period cosine, where the cosine is a shape chosen as a hypothesis, given the relation we observe between SST natural variations and 260 years of detrended sea level data. The cosine best fit shows a maximum ice coverage in 1985.6 and predicted minimum in 2017.6, which compares with the detrended sea level cyclic component minimum at 1990.6 and predicted maximum at 2023.6CE. Thus the sea-ice retreat lags RC60 by about 10 yr or 60deg in phase. The consistent phase of sea-level change over 260yr, and the phase lags of sea-ice retreat and sea-level change relative to the natural 65yr cyclic component of SST, have implications in the debate over internal versus external drivers of the cyclic components of change, and in hypotheses on cause and effect of the non-anthropogenic components of change.

  13. Abundant Gene-by-Environment Interactions in Gene Expression Reaction Norms to Copper within Saccharomyces cerevisiae

    PubMed Central

    Hodgins-Davis, Andrea; Adomas, Aleksandra B.; Warringer, Jonas; Townsend, Jeffrey P.

    2012-01-01

    Genetic variation for plastic phenotypes potentially contributes phenotypic variation to populations that can be selected during adaptation to novel ecological contexts. However, the basis and extent of plastic variation that manifests in diverse environments remains elusive. Here, we characterize copper reaction norms for mRNA abundance among five Saccharomyces cerevisiae strains to 1) describe population variation across the full range of ecologically relevant copper concentrations, from starvation to toxicity, and 2) to test the hypothesis that plastic networks exhibit increased population variation for gene expression. We find that although the vast majority of the variation is small in magnitude (considerably <2-fold), not just some, but most genes demonstrate variable expression across environments, across genetic backgrounds, or both. Plastically expressed genes included both genes regulated directly by copper-binding transcription factors Mac1 and Ace1 and genes indirectly responding to the downstream metabolic consequences of the copper gradient, particularly genes involved in copper, iron, and sulfur homeostasis. Copper-regulated gene networks exhibited more similar behavior within the population in environments where those networks have a large impact on fitness. Nevertheless, expression variation in genes like Cup1, important to surviving copper stress, was linked with variation in mitotic fitness and in the breadth of differential expression across the genome. By revealing a broader and deeper range of population variation, our results provide further evidence for the interconnectedness of genome-wide mRNA levels, their dependence on environmental context and genetic background, and the abundance of variation in gene expression that can contribute to future evolution. PMID:23019066

  14. Genetic background effects in quantitative genetics: gene-by-system interactions.

    PubMed

    Sardi, Maria; Gasch, Audrey P

    2018-04-11

    Proper cell function depends on networks of proteins that interact physically and functionally to carry out physiological processes. Thus, it seems logical that the impact of sequence variation in one protein could be significantly influenced by genetic variants at other loci in a genome. Nonetheless, the importance of such genetic interactions, known as epistasis, in explaining phenotypic variation remains a matter of debate in genetics. Recent work from our lab revealed that genes implicated from an association study of toxin tolerance in Saccharomyces cerevisiae show extensive interactions with the genetic background: most implicated genes, regardless of allele, are important for toxin tolerance in only one of two tested strains. The prevalence of background effects in our study adds to other reports of widespread genetic-background interactions in model organisms. We suggest that these effects represent many-way interactions with myriad features of the cellular system that vary across classes of individuals. Such gene-by-system interactions may influence diverse traits and require new modeling approaches to accurately represent genotype-phenotype relationships across individuals.

  15. Phase shifting interferometry based on a vibration sensor - feasibility study on elimination of the depth degeneracy

    NASA Astrophysics Data System (ADS)

    Lee, Seung Seok; Kim, Ju Ha; Choi, Eun Seo

    2017-04-01

    We proposed novel phase-shifting interferometry using a fiber-optic vibration sensor. The Doppler shift in the coiled fiber caused by vibrations can be used to detect the vibrations by using a fiber-optic interferometer. The principle can be applied to induce phase shifts. While applying vibrations to the coiled fiber at various vibration frequencies, we recorded the variations in the interference fringes. The interference fringe moved to longer wavelengths when a vibration frequency was increased from 38.00 to 38.40 kHz. Phase variations of 3.59 rad/kHz were obtained. The ability to accurately control the phase by using the vibrations in the coiled fiber was demonstrated by the elimination of the depth degeneracy using the complex signal generated by the phase-shifted interference fringes. Using vibrations to control phase shifting can be an acceptable alternative to conventional methods and can be applied to resolve the depth ambiguity in Fourier domain optical coherence tomography.

  16. Spatial variation of ultrafine particles and black carbon in two cities: results from a short-term measurement campaign.

    PubMed

    Klompmaker, Jochem O; Montagne, Denise R; Meliefste, Kees; Hoek, Gerard; Brunekreef, Bert

    2015-03-01

    Recently, short-term monitoring campaigns have been carried out to investigate the spatial variation of air pollutants within cities. Typically, such campaigns are based on short-term measurements at relatively large numbers of locations. It is largely unknown how well these studies capture the spatial variation of long term average concentrations. The aim of this study was to evaluate the within-site temporal and between-site spatial variation of the concentration of ultrafine particles (UFPs) and black carbon (BC) in a short-term monitoring campaign. In Amsterdam and Rotterdam (the Netherlands) measurements of number counts of particles larger than 10nm as a surrogate for UFP and BC were performed at 80 sites per city. Each site was measured in three different seasons of 2013 (winter, spring, summer). Sites were selected from busy urban streets, urban background, regional background and near highways, waterways and green areas, to obtain sufficient spatial contrast. Continuous measurements were performed for 30 min per site between 9 and 16 h to avoid traffic spikes of the rush hour. Concentrations were simultaneously measured at a reference site to correct for temporal variation. We calculated within- and between-site variance components reflecting temporal and spatial variations. Variance ratios were compared with previous campaigns with longer sampling durations per sample (24h to 14 days). The within-site variance was 2.17 and 2.44 times higher than the between-site variance for UFP and BC, respectively. In two previous studies based upon longer sampling duration much smaller variance ratios were found (0.31 and 0.09 for UFP and BC). Correction for temporal variation from a reference site was less effective for the short-term monitoring campaign compared to the campaigns with longer duration. Concentrations of BC and UFP were on average 1.6 and 1.5 times higher at urban street compared to urban background sites. No significant differences between the other site types and urban background were found. The high within to between-site concentration variances may result in the loss of precision and low explained variance when average concentrations from short-term campaigns are used to develop land use regression models. Copyright © 2014 Elsevier B.V. All rights reserved.

  17. Mobile phase additives for enhancing the chromatographic performance of astaxanthin on nonendcapped polymeric C30-bonded stationary phases.

    PubMed

    Kaiser, Philipp; Surmann, Peter; Fuhrmann, Herbert

    2009-01-01

    Astaxanthin shows peak deformation and reduced peak area response when eluted with methanol and methyl tert-butyl ether on nonendcapped polymeric C30-bonded HPLC phases. The present study tested different column manufacturers, column batches, and ten mobile phase additives including acids, bases, buffers, complexing and antioxidant agents for improvement of peak shape and peak area response. Concerning chromatographic benefits and feasibility, ammonium acetate was found to be the best additive followed by triethylamine for all columns tested. Variation of the mobile phase pH equivalent and the column temperature showed no synergistic effects on peak shape and peak area response. Results indicate that peak tailing and variation of peak area response are due to different on-column effects. Possible mechanisms of the observed phenomenon will be discussed.

  18. Temperature- and phase-independent lateral force sensor based on a core-offset multi-mode fiber interferometer.

    PubMed

    Dong, Bo; Zhou, Da-Peng; Wei, Li; Liu, Wing-Ki; Lit, John W Y

    2008-11-10

    A novel lateral force sensor based on a core-offset multi-mode fiber (MMF) interferometer is reported. High extinction ratio can be obtained by misaligning a fused cross section between the single-mode fiber (SMF) and MMF. With the variation of the lateral force applied to a short section of the MMF, the extinction ratio changes while the interference phase remains almost constant. The change of the extinction ratio is independent of temperature variations. The proposed force sensor has the advantages of temperature- and phase-independency, high extinction ratio sensitivity, good repeatability, low cost, and simple structure. Moreover, the core-offset MMF interferometer is expected to have applications in fiber filters and tunable phase-independent attenuators.

  19. Vpma phase variation is important for survival and persistence of Mycoplasma agalactiae in the immunocompetent host

    PubMed Central

    Zimmermann, Martina; Citti, Christine

    2017-01-01

    Despite very small genomes, mycoplasmas retain large multigene families encoding variable antigens whose exact role in pathogenesis needs to be proven. To understand their in vivo significance, we used Mycoplasma agalactiae as a model exhibiting high-frequency variations of a family of immunodominant Vpma lipoproteins via Xer1-mediated site-specific recombinations. Phase-Locked Mutants (PLMs) expressing single stable Vpma products served as first breakthrough tools in mycoplasmology to study the role of such sophisticated antigenic variation systems. Comparing the general clinical features of sheep infected with a mixture of phase-invariable PLMs (PLMU and PLMY) and the wild type strain, it was earlier concluded that Vpma phase variation is not necessary for infection. Conversely, the current study demonstrates the in vivo indispensability of Vpma switching as inferred from the Vpma phenotypic and genotypic analyses of reisolates obtained during sheep infection and necropsy. PLMY and PLMU stably expressing VpmaY and VpmaU, respectively, for numerous in vitro generations, switched to new Vpma phenotypes inside the sheep. Molecular genetic analysis of selected ‘switchover’ clones confirmed xer1 disruption and revealed complex new rearrangements like chimeras, deletions and duplications in the vpma loci that were previously unknown in type strain PG2. Another novel finding is the differential infection potential of Vpma variants, as local infection sites demonstrated an almost complete dominance of PLMY over PLMU especially during early stages of both conjunctival and intramammary co-challenge infections, indicating a comparatively better in vivo fitness of VpmaY expressors. The data suggest that Vpma antigenic variation is imperative for survival and persistence inside the immunocompetent host, and although Xer1 is necessary for causing Vpma variation in vitro, it is not a virulence factor because alternative Xer1-independent mechanisms operate in vivo, likely under the selection pressure of the host-induced immune response. This singular study highlights exciting new aspects of mycoplasma antigenic variation systems, including the regulation of expression by host factors. PMID:28957426

  20. ON THE VARIATION OF SOLAR RADIUS IN ROTATION CYCLES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Qu, Z. N.; Kong, D. F.; Xiang, N. B.

    2015-01-10

    The Date Compensated Discrete Fourier Transform and CLEANest algorithm are used to study the temporal variations of the solar radius observed at Rio de Janeiro Observatory from 1998 March 2 to 2009 November 6. The CLEANest spectra show several significant periodicities around 400, 312, 93.5, 86.2, 79.4, 70.9, 53.2, and 26.3 days. Then, combining the data on the daily solar radius measured at Calern Observatory and Rio de Janeiro Observatory and the corresponding daily sunspot areas, we study the short-term periodicity of the solar radius and the role of magnetic field in the variation of the solar radius. The rotation periodmore » of the daily solar radius is determined to be statistically significant. Moreover, its temporal evolution is anti-phase with that of sunspot activity, and it is found anti-phase with solar activity. Generally, the stronger solar activity is, the more obvious is the anti-phase relation of radius with solar activity. This indicates that strong magnetic fields have a greater inhibitive effect than weak magnetic fields on the variation of the radius.« less

  1. First Detection of the Acoustic Oscillation Phase Shift Expected from the Cosmic Neutrino Background.

    PubMed

    Follin, Brent; Knox, Lloyd; Millea, Marius; Pan, Zhen

    2015-08-28

    The unimpeded relativistic propagation of cosmological neutrinos prior to recombination of the baryon-photon plasma alters gravitational potentials and therefore the details of the time-dependent gravitational driving of acoustic oscillations. We report here a first detection of the resulting shifts in the temporal phase of the oscillations, which we infer from their signature in the cosmic microwave background temperature power spectrum.

  2. A speckle hologram of the interstellar plasma

    NASA Technical Reports Server (NTRS)

    Desai, K. M.; Gwinn, C. R.; Reynolds, J.; King, E. A.; Jauncey, D.; Flanagan, C.; Nicolson, G.; Preston, R. A.; Jones, D. L.

    1992-01-01

    Observations of a speckle hologram of scattering material along the line of sight to the Vela pulsar indicate that this material is concentrated in the Vela supernova remnant, deep within the Gum Nebula. The speckle hologram is observed through the amplitude and phase variations of the interferometric cross-power spectrum with time and frequency. These variations describe the density fluctuations of the interstellar plasma, in a holographic fashion. The decorrelation due to the phase variations of the speckles yields the angular size of the scattering disk; comparison with the bandwidth of their amplitude variations yields a characteristic distance from earth to the scattering material of 0.81 +/- 0.03 of the distance from earth to the pulsar. This result is consistent with theories of irregularities associated with particle acceleration in shocks in supernova remnants.

  3. Automatic phase aberration compensation for digital holographic microscopy based on deep learning background detection.

    PubMed

    Nguyen, Thanh; Bui, Vy; Lam, Van; Raub, Christopher B; Chang, Lin-Ching; Nehmetallah, George

    2017-06-26

    We propose a fully automatic technique to obtain aberration free quantitative phase imaging in digital holographic microscopy (DHM) based on deep learning. The traditional DHM solves the phase aberration compensation problem by manually detecting the background for quantitative measurement. This would be a drawback in real time implementation and for dynamic processes such as cell migration phenomena. A recent automatic aberration compensation approach using principle component analysis (PCA) in DHM avoids human intervention regardless of the cells' motion. However, it corrects spherical/elliptical aberration only and disregards the higher order aberrations. Traditional image segmentation techniques can be employed to spatially detect cell locations. Ideally, automatic image segmentation techniques make real time measurement possible. However, existing automatic unsupervised segmentation techniques have poor performance when applied to DHM phase images because of aberrations and speckle noise. In this paper, we propose a novel method that combines a supervised deep learning technique with convolutional neural network (CNN) and Zernike polynomial fitting (ZPF). The deep learning CNN is implemented to perform automatic background region detection that allows for ZPF to compute the self-conjugated phase to compensate for most aberrations.

  4. Impact of variational assimilation using multivariate background error covariances on the simulation of monsoon depressions over India

    NASA Astrophysics Data System (ADS)

    Dhanya, M.; Chandrasekar, A.

    2016-02-01

    The background error covariance structure influences a variational data assimilation system immensely. The simulation of a weather phenomenon like monsoon depression can hence be influenced by the background correlation information used in the analysis formulation. The Weather Research and Forecasting Model Data assimilation (WRFDA) system includes an option for formulating multivariate background correlations for its three-dimensional variational (3DVar) system (cv6 option). The impact of using such a formulation in the simulation of three monsoon depressions over India is investigated in this study. Analysis and forecast fields generated using this option are compared with those obtained using the default formulation for regional background error correlations (cv5) in WRFDA and with a base run without any assimilation. The model rainfall forecasts are compared with rainfall observations from the Tropical Rainfall Measurement Mission (TRMM) and the other model forecast fields are compared with a high-resolution analysis as well as with European Centre for Medium-Range Weather Forecasts (ECMWF) ERA-Interim reanalysis. The results of the study indicate that inclusion of additional correlation information in background error statistics has a moderate impact on the vertical profiles of relative humidity, moisture convergence, horizontal divergence and the temperature structure at the depression centre at the analysis time of the cv5/cv6 sensitivity experiments. Moderate improvements are seen in two of the three depressions investigated in this study. An improved thermodynamic and moisture structure at the initial time is expected to provide for improved rainfall simulation. The results of the study indicate that the skill scores of accumulated rainfall are somewhat better for the cv6 option as compared to the cv5 option for at least two of the three depression cases studied, especially at the higher threshold levels. Considering the importance of utilising improved flow-dependent correlation structures for efficient data assimilation, the need for more studies on the impact of background error covariances is obvious.

  5. Model of an axially strained weakly guiding optical fiber modal pattern

    NASA Technical Reports Server (NTRS)

    Egalon, Claudio O.; Rogowski, Robert S.

    1992-01-01

    Axial strain can be determined by monitoring the modal pattern variation of an optical fiber. The results of a numerical model developed to calculate the modal pattern variation at the end of a weakly guiding optical fiber under axial strain is presented. Whenever an optical fiber is under stress, the optical path length, the index of refraction, and the propagation constants of each fiber mode change. In consequence, the modal phase term for the fields and the fiber output pattern are also modified. For multimode fibers, very complicated patterns result. The predicted patterns are presented, and an expression for the phase variation with strain is derived.

  6. Development of CANDLES low background HPGe detector and half-life measurement of 180Tam

    NASA Astrophysics Data System (ADS)

    Chan, W. M.; Kishimoto, T.; Umehara, S.; Matsuoka, K.; Suzuki, K.; Yoshida, S.; Nakajima, K.; Iida, T.; Fushimi, K.; Nomachi, M.; Ogawa, I.; Tamagawa, Y.; Hazama, R.; Takemoto, Y.; Nakatani, N.; Takihira, Y.; Tozawa, M.; Kakubata, H.; Trang, V. T. T.; Ohata, T.; Tetsuno, K.; Maeda, T.; Khai, B. T.; Li, X. L.; Batpurev, T.

    2018-01-01

    A low background HPGe detector system was developed at CANDLES Experimental Hall for multipurpose use. Various low background techniques were employed, including hermatic shield design, radon gas suppression, and background reduction analysis. A new pulse shape discrimination (PSD) method was specially created for coaxial Ge detector. Using this PSD method, microphonics noise and background event at low energy region less than 200 keV can be rejected effectively. Monte Carlo simulation by GEANT4 was performed to acquire the detection efficiency and study the interaction of gamma-rays with detector system. For rare decay measurement, the detector was utilized to detect the nature's most stable isomer tantalum-180m (180Tam) decay. Two phases of tantalum physics run were completed with total livetime of 358.2 days, which Phase II has upgraded shield configuration. The world most stringent half-life limit of 180Tam has been successfully achieved.

  7. Laboratory Needs for Interstellar Ice Studies

    NASA Astrophysics Data System (ADS)

    Boogert, Abraham C. A.

    2012-05-01

    A large fraction of the molecules in dense interstellar and circumstellar environments is stored in icy grain mantles. The mantles are formed by a complex interplay between chemical and physical processes. Key questions on the accretion and desorption processes and the chemistry on the grain surfaces and within the icy mantles can only be answered by laboratory experiments. Recent infrared (2-30 micron) spectroscopic surveys of large samples of Young Stellar Objects (YSOs) and background stars tracing quiescent cloud material have shown that the ice band profiles and depths vary considerably as a function of environment. Using laboratory spectra in the identification process, it is clear that a rather complex mixture of simple species (CH3OH, CO2, H2O, CO) exists even in the quiescent cloud phase. Variations of the local physical conditions (CO freeze out) and time scales (CH3OH formation) appear to be key factors in the observed variations. Sublimation and thermal processing dominate as YSOs heat their environments. The identification of several ice absorption features is still disputed. I will outline laboratory work (e.g., on salts, PAHs, and aliphatic hydrocarbons) needed to further constrain the ice band identification as well as the thermal and chemical history of the carriers. Such experiments will also be essential to interpret future high spectral resolution SOFIA and JWST observations.

  8. Variations in Ionospheric Peak Electron Density During Sudden Stratospheric Warmings in the Arctic Region

    NASA Astrophysics Data System (ADS)

    Yasyukevich, A. S.

    2018-04-01

    The focus of the paper is the ionospheric disturbances during sudden stratospheric warming (SSW) events in the Arctic region. This study examines the ionospheric behavior during 12 SSW events, which occurred in the Northern Hemisphere over 2006-2013, based on vertical sounding data from DPS-4 ionosonde located in Norilsk (88.0°E, 69.2°N). Most of the addressed events show that despite generally quiet geomagnetic conditions, notable changes in the ionospheric behavior are observed during SSWs. During the SSW evolution and peak phases, there is a daytime decrease in NmF2 values at 10-20% relative to background level. After the SSW maxima, in contrast, midday NmF2 surpasses the average monthly values for 10-20 days. These changes in the electron density are observed for both strong and weak stratospheric warmings occurring at midwinter. The revealed SSW effects in the polar ionosphere are assumed to be associated with changes in the thermospheric neutral composition, affecting the F2-layer electron density. Analysis of the Global Ultraviolet Imager data revealed the positive variations in the O/N2 ratio within the thermosphere during SSW peak and recovery periods. Probable mechanisms for SSW impact on the state of the high-latitude neutral thermosphere and ionosphere are discussed.

  9. Optical testing using the transport-of-intensity equation.

    PubMed

    Dorrer, C; Zuegel, J D

    2007-06-11

    The transport-of-intensity equation links the intensity and phase of an optical source to the longitudinal variation of its intensity in the presence of Fresnel diffraction. This equation can be used to provide a simple, accurate spatial-phase measurement for optical testing of flat surfaces. The properties of this approach are derived. The experimental demonstration is performed by quantifying the surface variations induced by the magnetorheological finishing process on laser rods.

  10. High precision, fast ultrasonic thermometer based on measurement of the speed of sound in air

    NASA Astrophysics Data System (ADS)

    Huang, K. N.; Huang, C. F.; Li, Y. C.; Young, M. S.

    2002-11-01

    This study presents a microcomputer-based ultrasonic system which measures air temperature by detecting variations in the speed of sound in the air. Changes in the speed of sound are detected by phase shift variations of a 40 kHz continuous ultrasonic wave. In a test embodiment, two 40 kHz ultrasonic transducers are set face to face at a constant distance. Phase angle differences between transmitted and received signals are determined by a FPGA digital phase detector and then analyzed in an 89C51 single-chip microcomputer. Temperature is calculated and then sent to a LCD display and, optionally, to a PC. Accuracy of measurement is within 0.05 degC at an inter-transducer distance of 10 cm. Temperature variations are displayed within 10 ms. The main advantages of the proposed system are high resolution, rapid temperature measurement, noncontact measurement and easy implementation.

  11. Influences of misfit strains on liquid phase heteroepitaxial growth

    NASA Astrophysics Data System (ADS)

    Lu, Yanli; Peng, Yingying; Yu, Genggeng; Chen, Zheng

    2017-10-01

    Influences of misfit strains with different signs on liquid phase heteroepitaxial growth are studied by binary phase field crystal model. It is amazing to find that double islands are formed because of lateral and vertical separation. The morphological evolution of epitaxial layer depends on signs of misfit strains. The maximum atomic layer thickness of double islands under negative misfit strain is larger than that of under positive misfit strain at the same evolutional time, and size differences between light and dark islands is much smaller under negative misfit strain than that of under positive misfit strain. In addition, concentration field and density field approximately have similar variational law along x direction under the same misfit strain but show opposite variational trend under misfit strains with different signs. Generally, free energy of epitaxial growth systems keeps similar variational trend under misfit strains with different signs.

  12. The ultraviolet variations of iota Cas

    NASA Technical Reports Server (NTRS)

    Molnar, M. R.; Mallama, A. D.; Soskey, D. G.; Holm, A. V.

    1976-01-01

    The Ap variable star iota Cas was observed with the photometers on OAO-2 covering the spectral range 1430-4250 A. The ultraviolet light curves show a double wave with primary minimum and maximum at phase ? 0.00 and 0.35, respectively. Secondary minimum light is at phase ? 0.65 with secondary maximum at phase ? 0.85. The light curves longward of 3150 A vary in opposition to those shortward of this 'null region'. Ground-based coude spectra show that the Fe II and Cr II line strengths have a double-wave variation such that maximum strength occurs at minimum ultraviolet light. We suggest that the strong ultraviolet opacities due to photoionization and line blanketing by these metals may cause the observed photometric variations. We have also constructed an oblique-rotator model which shows iron and chromium lying in a great circle band rather than in circular spots.

  13. BROADBAND SPECTROSCOPY USING TWO SUZAKU OBSERVATIONS OF THE HMXB GX 301-2

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Suchy, Slawomir; Markowitz, Alex; Rothschild, Richard E.

    2012-02-01

    We present the analysis of two Suzaku observations of GX 301-2 at two orbital phases after the periastron passage. Variations in the column density of the line-of-sight absorber are observed, consistent with accretion from a clumpy wind. In addition to a cyclotron resonance scattering feature (CRSF), multiple fluorescence emission lines were detected in both observations. The variations in the pulse profiles and the CRSF throughout the pulse phase have a signature of a magnetic dipole field. Using a simple dipole model we calculated the expected magnetic field values for different pulse phases and were able to extract a set ofmore » geometrical angles, loosely constraining the dipole geometry in the neutron star. From the variation of the CRSF width and energy, we found a geometrical solution for the dipole, making the inclination consistent with previously published values.« less

  14. MBA Curriculum: The Role of an Introductory "Toolkit" Course

    ERIC Educational Resources Information Center

    Carson, Charles M.; Jones, Steven T.; Dance, Jeffrey W.; Finch, James H.; Holloway, Betsy B.; Reburn, James P.; Belski, William H.

    2013-01-01

    Graduate business students enter MBA programs intent on completing their degrees to open new professional opportunities and enhance their prospective career earnings potential. Because of the diversity of backgrounds new students bring into their MBA programs, large variations exist among their academic and professional backgrounds. Curriculums…

  15. Seasonal variation of organic aerosol in PM2.5 at Anmyeondo, a background site in Korea

    NASA Astrophysics Data System (ADS)

    Lee, J.; Kim, E. S.; Kim, Y. P.; Jung, C. H.; Lee, J.

    2016-12-01

    Routine measurements of PM2.5 and chemical speciation for 100 individual organic compounds were carried out to understand seasonal variation of organic compounds at a background area in Korea between 2015 and 2016. Organic compounds analyzed in this study were classified into five groups, n-alkanes, polycyclic aromatic hydrocarbons (PAHs), fatty acids (FA), dicarboxylic acids (DCAs), and sugar. Further, organic carbon (OC), elemental carbon (EC), water-soluble organic carbon (WSOC) and Humic Like Substance-Carbon (HULIS-C) in PM2.5 were simultaneously analyzed to make mass balance of carbonaceous aerosol in PM2.5 at a background site in Korea. PAHs concentrations at this site was lower than that at Seoul, a representative urban site in Korea. PAHs and n-Alkanes concentrations showed clear seasonal variation with summer minimum and winter maximum, while, seasonal variation of DCAs and Sugars were different with PAHs and n-Alkanes.WSOC concentrations were highly correlated with SOC (Secondary Organic Carbon) concentrations which were estimated by the EC tracer method. The results indicate the formation of secondary organic aerosol (SOA) is major factor for the determination of WSOC concentrations in this region. HULIS-C as known one of brown carbon was major component of WSOC which accounts for 39 to 99% in WSOC. The average concentrations of HULIS-C was 2.02±1.42 and the highest concentration was observed in fall.

  16. Accurate phase extraction algorithm based on Gram–Schmidt orthonormalization and least square ellipse fitting method

    NASA Astrophysics Data System (ADS)

    Lei, Hebing; Yao, Yong; Liu, Haopeng; Tian, Yiting; Yang, Yanfu; Gu, Yinglong

    2018-06-01

    An accurate algorithm by combing Gram-Schmidt orthonormalization and least square ellipse fitting technology is proposed, which could be used for phase extraction from two or three interferograms. The DC term of background intensity is suppressed by subtraction operation on three interferograms or by high-pass filter on two interferograms. Performing Gram-Schmidt orthonormalization on pre-processing interferograms, the phase shift error is corrected and a general ellipse form is derived. Then the background intensity error and the corrected error could be compensated by least square ellipse fitting method. Finally, the phase could be extracted rapidly. The algorithm could cope with the two or three interferograms with environmental disturbance, low fringe number or small phase shifts. The accuracy and effectiveness of the proposed algorithm are verified by both of the numerical simulations and experiments.

  17. Spectroscopic Doppler analysis for visible-light optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Shu, Xiao; Liu, Wenzhong; Duan, Lian; Zhang, Hao F.

    2017-12-01

    Retinal oxygen metabolic rate can be effectively measured by visible-light optical coherence tomography (vis-OCT), which simultaneously quantifies oxygen saturation and blood flow rate in retinal vessels through spectroscopic analysis and Doppler measurement, respectively. Doppler OCT relates phase variation between sequential A-lines to the axial flow velocity of the scattering medium. The detectable phase shift is between -π and π due to its periodicity, which limits the maximum measurable unambiguous velocity without phase unwrapping. Using shorter wavelengths, vis-OCT is more vulnerable to phase ambiguity since flow induced phase variation is linearly related to the center wavenumber of the probing light. We eliminated the need for phase unwrapping using spectroscopic Doppler analysis. We split the whole vis-OCT spectrum into a series of narrow subbands and reconstructed vis-OCT images to extract corresponding Doppler phase shifts in all the subbands. Then, we quantified flow velocity by analyzing subband-dependent phase shift using linear regression. In the phantom experiment, we showed that spectroscopic Doppler analysis extended the measurable absolute phase shift range without conducting phase unwrapping. We also tested this method to quantify retinal blood flow in rodents in vivo.

  18. Knee joint kinaesthesia and neuromuscular coordination during three phases of the menstrual cycle in moderately active women.

    PubMed

    Fridén, Cecilia; Hirschberg, Angelica Lindén; Saartok, Tönu; Renström, Per

    2006-04-01

    An increased incidence of sports related injuries in the premenstrual phase as well as in the menstrual phase of the menstrual cycle has been described. This may be explained by alterations in proprioception and neuromuscular coordination due to hormonal variations. Prospective, within women analysis of knee joint kinesthesia and neuromuscular coordination were performed by repeated measures analysis of variance in three hormonally verified phases of three consecutive menstrual cycles. Thirty-two healthy, moderately active female subjects volunteered to participate in the study. Twenty-five of the subjects performed at least one hormonally verified menstrual cycle. A specially designed device was used to investigate knee joint kinaesthesia and neuromuscular coordination was measured with the square hop test. These tests were carried out in the menstrual phase, ovulation phase and premenstrual phase determined by hormone analyses in three consecutive menstrual cycles. An impaired knee joint kinaesthesia was detected in the premenstrual phase and the performance of square hop test was significantly improved in the ovulation phase compared to the other two phases. The results of this study indicate that the variation of sex hormones in the menstrual cycle has an effect on performance of knee joint kinaesthesia and neuromuscular coordination.

  19. International Ultraviolet Explorer Observations of Wolf-Rayet Binaries: Wind Structures. Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Koenigsberger, G.

    1983-01-01

    Spectra of six WN + OB Wolf-Rayet systems obtained with the IUE are analyzed for phase-dependent variations. Periodic variability at emission-line frequencies is detected in V444 Cyg, HD 90657, HD 211853, HD 186943 and HD 94546 on low dispersion SWP images. No changes in the low dispersion spectra of HD 193077 are apparent. We find the variations in the UV to be similar in nature to those observed in optical spectra of various WR sources. That is, there is a strengthening of absorption components in P Cygni-type features at orbital phases in which the O-star is behind the WR wind. With the aid of a computer code which models this type of variations, and through a comparison with HD 193077, the dominant mechanism producing the variations is shown to be selective atmospheric eclipses of the O-star by the WR wind. Based on this interpretation, a straightforward technique is applied to the line of N IV 1718, by which an optical depth distribution in the WN winds of the form tau varies as r(-1) is derived for 16 r 66 solar radii. Phase-dependent variations in the width of the C IV 1550 absorption component in V444 Cyg, HD 90657 and HD 211853 are interpretated as wind-wind collision effects.

  20. VLF phase and amplitude: daytime ionospheric parameters

    NASA Astrophysics Data System (ADS)

    McRae, W. M.; Thomson, N. R.

    2000-05-01

    Experimental observations of the daytime variations of VLF phase and amplitude over a variety of long subionospheric paths have been found to be satisfactorily modelled with a D-region ionosphere, described by the two traditional parameters, H' and /β (being measures of the ionospheric height and the rate of increase of electron density with height, respectively). This VLF radio modelling uses the NOSC Earth-ionosphere waveguide programs but with an experimentally deduced dependence of these two ionospheric parameters on solar zenith angle. Phase and amplitude measurements from several VLF Omega and MSK stations were compared with calculations from the programs LWPC and Modefinder using values of H' and /β determined previously from amplitude only data. This led to refined curves for the diurnal variations of H' and /β which, when used in these programs, give not only calculated amplitudes but also, for the first time, calculated phase variations that agree well with a series of observations at Dunedin, New Zealand, of VLF signals from Omega Japan, Omega Hawaii, NPM (Hawaii) and NLK (Seattle) covering a frequency range of 10-25 kHz.

  1. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kataria, T.; Showman, A. P.; Fortney, J. J.

    We present three-dimensional atmospheric circulation models of GJ 1214b, a 2.7 Earth-radius, 6.5 Earth-mass super Earth detected by the MEarth survey. Here we explore the planet's circulation as a function of atmospheric metallicity and atmospheric composition, modeling atmospheres with a low mean molecular weight (MMW; i.e., H{sub 2}-dominated) and a high MMW (i.e., water- and CO{sub 2}-dominated). We find that atmospheres with a low MMW have strong day-night temperature variations at pressures above the infrared photosphere that lead to equatorial superrotation. For these atmospheres, the enhancement of atmospheric opacities with increasing metallicity lead to shallower atmospheric heating, larger day-night temperaturemore » variations, and hence stronger superrotation. In comparison, atmospheres with a high MMW have larger day-night and equator-to-pole temperature variations than low MMW atmospheres, but differences in opacity structure and energy budget lead to differences in jet structure. The circulation of a water-dominated atmosphere is dominated by equatorial superrotation, while the circulation of a CO{sub 2}-dominated atmosphere is instead dominated by high-latitude jets. By comparing emergent flux spectra and light curves for 50× solar and water-dominated compositions, we show that observations in emission can break the degeneracy in determining the atmospheric composition of GJ 1214b. The variation in opacity with wavelength for the water-dominated atmosphere leads to large phase variations within water bands and small phase variations outside of water bands. The 50× solar atmosphere, however, yields small variations within water bands and large phase variations at other characteristic wavelengths. These observations would be much less sensitive to clouds, condensates, and hazes than transit observations.« less

  2. Science with the space-based interferometer eLISA. II: gravitational waves from cosmological phase transitions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Caprini, Chiara, E-mail: chiara.caprini@cea.fr; Hindmarsh, Mark; Huber, Stephan

    We investigate the potential for the eLISA space-based interferometer to detect the stochastic gravitational wave background produced by strong first-order cosmological phase transitions. We discuss the resulting contributions from bubble collisions, magnetohydrodynamic turbulence, and sound waves to the stochastic background, and estimate the total corresponding signal predicted in gravitational waves. The projected sensitivity of eLISA to cosmological phase transitions is computed in a model-independent way for various detector designs and configurations. By applying these results to several specific models, we demonstrate that eLISA is able to probe many well-motivated scenarios beyond the Standard Model of particle physics predicting strong first-ordermore » cosmological phase transitions in the early Universe.« less

  3. Finite Difference modeling of VLF Propagation in the Earth-Ionosphere Waveguide

    NASA Astrophysics Data System (ADS)

    Marshall, R. A.; Wallace, T.; Turbe, M.

    2016-12-01

    Very-low-frequency (VLF, 3—30 kHz) waves can propagate efficiently in the waveguide formed by the Earth and the D-region ionosphere. vVariation in the signals monitored by a stationary receiver can be attributed to variations in the lower ionosphere. As such, these signals are used to monitor the D-region ionosphere in daytime and nighttime. However, the use of VLF transmitter signals to quantitatively diagnose the D-region ionosphere is complicated by i) the propagation of many modes in the waveguide, and their interference, and ii) the effect of the ionosphere along the entire path on the receiver signal at a single location. In this paper, we compare the modeled phase and amplitude of VLF signals using three methods: a Finite-Difference Time-Domain (FDTD) model, a Finite-Difference Frequency-Domain (FDFD) model, and the Long-Wave Prediction Capability (LWPC) model, which has been the method de rigueur since the 1970s. While LWPC solves mode propagation and coupling in the anisotropic waveguide, the FD methods directly solve for electric and magnetic fields from Maxwell's equations on a finite-difference grid. Thus, FD methods provide greater freedom to vary the physical inputs of the model, limited only by the spatial resolution, but at the expense of computation time. We compare the simulated amplitude and phase of these models by running them with identical physical inputs. In this work we compare both i) the absolute amplitude and phase trends as a function of distance, and ii) the magnitude of amplitude and phase variations for given ionosphere changes. Modeling results show that FDTD and FDFD simulations track the amplitude and phase as a function of distance very closely when compared to LWPC. Phase drift due to numerical dispersion is observed at large distances, of a few tens of degrees per 1000 km. These phase drifts increase quadratically with frequency, as expected from numerical dispersion in FD methods. In fact, the phase drift can be mostly removed by applying a simple Richardson extrapolation. After extrapolating, FDTD and LWPC differences can be mapped to a phase velocity difference of <0.07%. When we compare phase changes due to ionospheric variations (Figure 1), we find that all three models show similar magnitudes of phase changes, to within 20%, and similar trends with frequency.­­­

  4. Bayesian analysis of energy and count rate data for detection of low count rate radioactive sources

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Klumpp, John

    We propose a radiation detection system which generates its own discrete sampling distribution based on past measurements of background. The advantage to this approach is that it can take into account variations in background with respect to time, location, energy spectra, detector-specific characteristics (i.e. different efficiencies at different count rates and energies), etc. This would therefore be a 'machine learning' approach, in which the algorithm updates and improves its characterization of background over time. The system would have a 'learning mode,' in which it measures and analyzes background count rates, and a 'detection mode,' in which it compares measurements frommore » an unknown source against its unique background distribution. By characterizing and accounting for variations in the background, general purpose radiation detectors can be improved with little or no increase in cost. The statistical and computational techniques to perform this kind of analysis have already been developed. The necessary signal analysis can be accomplished using existing Bayesian algorithms which account for multiple channels, multiple detectors, and multiple time intervals. Furthermore, Bayesian machine-learning techniques have already been developed which, with trivial modifications, can generate appropriate decision thresholds based on the comparison of new measurements against a nonparametric sampling distribution. (authors)« less

  5. An analog retina model for detecting dim moving objects against a bright moving background

    NASA Technical Reports Server (NTRS)

    Searfus, R. M.; Colvin, M. E.; Eeckman, F. H.; Teeters, J. L.; Axelrod, T. S.

    1991-01-01

    We are interested in applications that require the ability to track a dim target against a bright, moving background. Since the target signal will be less than or comparable to the variations in the background signal intensity, sophisticated techniques must be employed to detect the target. We present an analog retina model that adapts to the motion of the background in order to enhance targets that have a velocity difference with respect to the background. Computer simulation results and our preliminary concept of an analog 'Z' focal plane implementation are also presented.

  6. Within subject variation of satiety hormone responses to a standard lunch

    USDA-ARS?s Scientific Manuscript database

    Background: Insulin (Ins), leptin (Lep), GLP-1, and glucagon (Glg) are known regulators of glucose metabolism and food intake, but reproducibility in response to a meal challenge is not well characterized. We assessed within-subject variation of these hormones in 14 young adult women.Methods: Subjec...

  7. What Matters in Education: A Decomposition of Educational Outcomes with Multiple Measures

    ERIC Educational Resources Information Center

    Li, Jinjing; Miranti, Riyana; Vidyattama, Yogi

    2017-01-01

    Significant variations in educational outcomes across both the spatial and socioeconomic spectra in Australia have been widely debated by policymakers in recent years. This paper examines these variations and decomposes educational outcomes into 3 major input factors: availability of school resources, socioeconomic background, and a latent factor…

  8. Preschool Language Variation, Growth, and Predictors in Children on the Autism Spectrum

    ERIC Educational Resources Information Center

    Ellis Weismer, Susan; Kover, Sara T.

    2015-01-01

    Background: There is wide variation in language abilities among young children with autism spectrum disorders (ASD), with some toddlers developing age-appropriate language while others remain minimally verbal after age 5. Conflicting findings exist regarding predictors of language outcomes in ASD and various methodological issues limit the…

  9. Predictors of Between-Family and Within-Family Variation in Parent-Child Relationships

    ERIC Educational Resources Information Center

    O'Connor, Thomas G.; Dunn, Judy; Jenkins, Jennifer M.; Rasbash, Jon

    2006-01-01

    Background: Previous studies have found that multiple factors are associated with parent-child relationship quality, but have not distinguished potential sources of between-family and within-family variation in parent-child relationship quality. Methods: Approximately equal numbers of biological (non-stepfamilies), single-mother, stepfather, and…

  10. Additional spectra of asteroid 1996 FG3, backup target of the ESA MarcoPolo-R mission

    NASA Astrophysics Data System (ADS)

    de León, J.; Lorenzi, V.; Alí-Lagoa, V.; Licandro, J.; Pinilla-Alonso, N.; Campins, H.

    2013-08-01

    Context. Near-Earth binary asteroid (175706) 1996 FG3 is the current backup target of the ESA MarcoPolo-R mission, selected for the study phase of ESA M3 missions. It is a primitive (C-type) asteroid that shows significant variation in its visible and near-infrared spectra. Aims: Here we present new visible and near-infrared spectra of 1996 FG3. We compare our new data with other published spectra, analysing the variation in the spectral slope. The asteroid will not be observable again over the next three years at least. Methods: We obtained visible and near-infrared spectra using DOLORES and NICS instruments, respectively, at the Telescopio Nazionale Galileo (TNG), a 3.6 m telescope located at El Roque de los Muchachos Observatory in La Palma, Spain. To compare with other published spectra of the asteroid, we computed the spectral slope S', and studied any plausible correlation of this quantity with the phase angle (α). Results: In the case of visible spectra, we find a variation in spectral slope of ΔS' = 0.15 ± 0.10%/103 Å/° for 3°<α< 18°, which is in good agreement with the values found in the literature for the phase reddening effect. In the case of the near-infrared, there seems to be a trend between the reddening of the spectra and the phase angle, excluding one point. We find a variation in the slope of ΔS' = 0.04 ± 0.08%/103 Å/° for 6° < α < 51°. Our computed variation in S' is in good agreement with the only two values found in the literature for the phase reddening in the near-infrared. Conclusions: The variation in the spectral slope of asteroid 1996 FG3 shows a trend with the phase angle at the time of the observations, both in the visible and the near-infrared. It is worth noting that, to fully explain this spectral variability we should take into account other factors, like the position of the secondary component of the binary asteroid 1999 FG3 with respect to the primary, or the spin axis orientation at the time of the observations. More data are necessary for an analysis of this kind.

  11. Joint seismic-infrasonic processing of recordings from a repeating source of atmospheric explosions.

    PubMed

    Gibbons, Steven J; Ringdal, Frode; Kvaerna, Tormod

    2007-11-01

    A database has been established of seismic and infrasonic recordings from more than 100 well-constrained surface explosions, conducted by the Finnish military to destroy old ammunition. The recorded seismic signals are essentially identical and indicate that the variation in source location and magnitude is negligible. In contrast, the infrasonic arrivals on both seismic and infrasound sensors exhibit significant variation both with regard to the number of detected phases, phase travel times, and phase amplitudes, which would be attributable to atmospheric factors. This data set provides an excellent database for studies in sound propagation, infrasound array detection, and direction estimation.

  12. Phase-field modelling of ductile fracture: a variational gradient-extended plasticity-damage theory and its micromorphic regularization

    PubMed Central

    Teichtmeister, S.; Aldakheel, F.

    2016-01-01

    This work outlines a novel variational-based theory for the phase-field modelling of ductile fracture in elastic–plastic solids undergoing large strains. The phase-field approach regularizes sharp crack surfaces within a pure continuum setting by a specific gradient damage modelling. It is linked to a formulation of gradient plasticity at finite strains. The framework includes two independent length scales which regularize both the plastic response as well as the crack discontinuities. This ensures that the damage zones of ductile fracture are inside of plastic zones, and guarantees on the computational side a mesh objectivity in post-critical ranges. PMID:27002069

  13. Solvent vapour monitoring in work space by solid phase micro extraction.

    PubMed

    Li, K; Santilli, A; Goldthorp, M; Whiticar, S; Lambert, P; Fingas, M

    2001-05-07

    Solid phase micro extraction (SPME) is a fast, solvent-less alternative to conventional charcoal tube sampling/carbon disulfide extraction for volatile organic compounds (VOC). In this work, SPME was compared to the active sampling technique in a typical lab atmosphere. Two different types of fibre coatings were evaluated for solvent vapour at ambient concentration. A general purpose 100 microm film polydimethylsiloxane (PDMS) fibre was found to be unsuitable for VOC work, despite the thick coating. The mixed-phase carboxen/PDMS fibre was found to be suitable. Sensitivity of the SPME was far greater than charcoal sorbent tube method. Calibration studies using typical solvent such as dichloromethane (DCM), benzene (B) and toluene (T) showed an optimal exposure time of 5 min, with a repeatability of less than 20% for a broad spectrum of organic vapour. Minimum detectable amount for DCM is in the range of 0.01 microg/l (0.003 ppmv). Variation among different fibres was generally within 30% at a vapour concentration of 1 microg DCM/l, which was more than adequate for field monitoring purpose. Adsorption characteristics and calibration procedures were studied. An actual application of SPME was carried out to measure background level of solvent vapour at a bench where DCM was used extensively. Agreement between the SPME and the charcoal sampling method was generally within a factor of two. No DCM concentration was found to be above the regulatory limit of 50 ppmv.

  14. Phased Arrays of Ground and Airborne Mobile Terminals for Satellite Communications

    NASA Technical Reports Server (NTRS)

    Huang, John

    1996-01-01

    Phased array antenna is beginning to play an important in the arena of mobile/satellite communications. Two examples of mobile terminal phased arrays will be shown. Their technical background, challenges, and cost drivers will be discussed. A possible solution to combat some of the deficiencies of the conventional phased array by exploiting the phased reflectarray technology will be briefly presented.

  15. Inter-doctor variations in the assessment of functional incapacities by insurance physicians

    PubMed Central

    2011-01-01

    Background The aim of this study was to determine the - largely unexplored - extent of systematic variation in the work disability assessment by Dutch insurance physicians (IPs) of employees on long-term sick leave, and to ascertain whether this variation was associated with the individual characteristics and opinions of IPs. Methods In March 2008 we conducted a survey among IPs on the basis of the 'Attitude - Social norm - self-Efficacy' (ASE) model. We used the ensuing data to form latent variables for the ASE constructs. We then linked the background variables and the measured constructs for IPs (n = 199) working at regional offices (n = 27) to the work disability assessments of clients (n = 83,755) and their characteristics. These assessments were carried out between July 2003 and April 2008. We performed multilevel regression analysis on three important assessment outcomes: No Sustainable Capacity or Restrictions for Working Hours (binominal), Functional Incapacity Score (scale 0-6) and Maximum Work Disability Class (binominal). We calculated Intra Class Correlations (ICCs) at IP level and office level and explained variances (R2) for the three outcomes. A higher ICC reflects stronger systematic variation. Results The ICCs at IP level were approximately 6% for No Sustainable Capacity or Restrictions for Working Hours and Maximum Work Disability Class and 12% for Functional Incapacity Score. Background IP variables and the measured ASE constructs for physicians contributed very little to the variation - at most 1%. The ICCs at office level ranged from 0% to around 1%. The R2 was 11% for No Sustainable Capacity or Restrictions for Working Hours, 19% for Functional Incapacity Score and 37% for Maximum Work Disability Class. Conclusion Our study uncovered small to moderate systematic variations in the outcome of disability assessments in the Netherlands. However, the individual characteristics and opinions of insurance physicians have very little impact on these variations. Our findings provided no indications of other reasons for these variations. They may be related to different work routines or to different views on the workload of a 'normal' employee. If so, they could be reduced by well-developed and comprehensively implemented guidelines. Therefore, further research is needed. PMID:22077926

  16. An extended algebraic variational multiscale-multigrid-multifractal method (XAVM4) for large-eddy simulation of turbulent two-phase flow

    NASA Astrophysics Data System (ADS)

    Rasthofer, U.; Wall, W. A.; Gravemeier, V.

    2018-04-01

    A novel and comprehensive computational method, referred to as the eXtended Algebraic Variational Multiscale-Multigrid-Multifractal Method (XAVM4), is proposed for large-eddy simulation of the particularly challenging problem of turbulent two-phase flow. The XAVM4 involves multifractal subgrid-scale modeling as well as a Nitsche-type extended finite element method as an approach for two-phase flow. The application of an advanced structural subgrid-scale modeling approach in conjunction with a sharp representation of the discontinuities at the interface between two bulk fluids promise high-fidelity large-eddy simulation of turbulent two-phase flow. The high potential of the XAVM4 is demonstrated for large-eddy simulation of turbulent two-phase bubbly channel flow, that is, turbulent channel flow carrying a single large bubble of the size of the channel half-width in this particular application.

  17. Energy and mass balance in the three-phase interstellar medium

    NASA Technical Reports Server (NTRS)

    Wang, Zhong; Cowie, Lennox L.

    1988-01-01

    Details of the energy and mass balances are considered in the context of a three-phase interstellar medium. The rates of mass exchange between the different phases are derived based on the pressure variations created by supernova remnant expansions. It is shown that the pressure-confined warm and cold gases have stable temperatures under a variety of interstellar conditions. The three-phase quasi-static configuration is found to be a natural outcome, and both warm and cold phases generally contribute about half of the total mass density to the diffuse interstellar gas. The model is also likely to be self-regulatory in the sense that variations of the input parameters do not strongly alter the general result, which is consistent with most current observations. The consequences of extreme conditions on this model are considered, and the possible implications for interstellar medium in other galaxies are briefly discussed.

  18. Deciphering the factors influencing the discrepant fate of antibiotic resistance genes in sludge and water phases during municipal wastewater treatment.

    PubMed

    Zhang, Junya; Yang, Min; Zhong, Hui; Liu, Mengmeng; Sui, Qianwen; Zheng, Libing; Tong, Juan; Wei, Yuansong

    2018-06-09

    The discrepant fate of antibiotic resistance genes (ARGs) in sludge and water phases was investigated in a municipal wastewater treatment plant, and a lab-scale A 2 O-MBR was operated to provide background value of ARGs. The influencing factors of ARGs including microbial community, co-selection from heavy metals, biomass and horizontal gene transfer were concerned. Results showed that iA 2 O (inversed A 2 O) showed better ARGs reduction, and longer SRT (sludge retention time) increased ARGs relative abundance while reduced the gene copies of ARGs in the effluent, but significantly increased the ARGs in sludge phase. Compared to background value, the most enriched ARG was tetX in water phase, while it was intI1 in sludge phase. There existed higher abundance of multi-resistant bacteria in sludge phase, and microbial community determined the fate of ARGs in both water and sludge phase, while the direct effects from horizontal gene transfer should not be overlooked especially in water phase. Copyright © 2018 Elsevier Ltd. All rights reserved.

  19. Search for neutrinoless double beta decay with GERDA phase II

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Bettini, A.; Bezrukov, L.; Bode, T.; Borowicz, D.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; D'Andrea, V.; Demidova, E. V.; Di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Gangapshev, A.; Garfagnini, A.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hofmann, W.; Hult, M.; Inzhechik, L. V.; Csáthy, J. Janicskó; Jochum, J.; Junker, M.; Kazalov, V.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knies, J.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lebedev, V. I.; Liao, H. Y.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Majorovits, B.; Maneschg, W.; Marissens, G.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Ransom, C.; Reissfelder, M.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Salamida, F.; Schmitt, C.; Schneider, B.; Schönert, S.; Schreiner, J.; Schulz, O.; Schütz, A.-K.; Schwingenheuer, B.; Seitz, H.; Selivanenko, O.; Shevchik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zuber, K.; Zuzel, G.

    2017-10-01

    The GERmanium Detector Array (gerda) experiment, located at the Gran Sasso underground laboratory in Italy, is one of the leading experiments for the search of 0νββ decay. In Phase II of the experiment 35.6 kg of enriched germanium detectors are operated. The application of active background rejection methods, such as a liquid argon scintillation light read-out and pulse shape discrimination of germanium detector signals, allowed to reduce the background index to the intended level of 10-3 cts/(keV.kg.yr). In the first five month of data taking 10.8 kg yr of exposure were accumulated. No signal has been found and together with data from Phase I a new limit for the neutrinoless double beta decay half-life of 76Ge of 5.3 . 1025 yr at 90% C.L. was established in June 2016. Phase II data taking is ongoing and will allow the exploration of half-lifes in the 1026 yr regime. The current status of data taking and an update on the background index are presented.

  20. Nonsingular cosmology with a scale-invariant spectrum of cosmological perturbations from Lee-Wick theory

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cai Yifu; Qiu Taotao; Brandenberger, Robert

    2009-07-15

    We study the cosmology of a Lee-Wick type scalar field theory. First, we consider homogeneous and isotropic background solutions and find that they are nonsingular, leading to cosmological bounces. Next, we analyze the spectrum of cosmological perturbations which result from this model. Unless either the potential of the Lee-Wick theory or the initial conditions are finely tuned, it is impossible to obtain background solutions which have a sufficiently long period of inflation after the bounce. More interestingly, however, we find that in the generic noninflationary bouncing cosmology, perturbations created from quantum vacuum fluctuations in the contracting phase have the correctmore » form to lead to a scale-invariant spectrum of metric inhomogeneities in the expanding phase. Since the background is nonsingular, the evolution of the fluctuations is defined unambiguously through the bounce. We also analyze the evolution of fluctuations which emerge from thermal initial conditions in the contracting phase. The spectrum of gravitational waves stemming from quantum vacuum fluctuations in the contracting phase is also scale-invariant, and the tensor to scalar ratio is not suppressed.« less

  1. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wagner, Victoria

    The GERDA experiment is designed to search for neutrinoless double beta (0νββ) decay of {sup 76}Ge. In Phase I of the experiment a background index of 10{sup −2} cts/(keV·kg·yr) was reached. A lower limit on the half-life of the 0νββ decay of {sup 76}Ge was set to 2.1·10{sup 25} yr (at 90% C.L.). The aim of Phase II is to reach a sensitivity of the half-life of about 10{sup 26} yr. To increase the exposure thirty new Broad Energy Germanium (BEGe) detectors have been produced. These detectors are distinct for their improved energy resolution and enhanced pulse shape discrimination ofmore » signal from background events. Further background reduction will be reached by a light instrumentation to read out argon scintillation light. In April 2015 the light instrumentation together with eight BEGe detectors has been successfully deployed in the GERDA cryostat. In a commissioning run it was shown that two of the major background components, external γ-rays from {sup 214}Bi and {sup 208}Tl decays, were suppressed up to two orders of magnitude. We are confident to reach a background index of 10{sup −3} cts/(keV·kg·yr) which is the design goal for GERDA Phase II.« less

  2. Resistivity variations related to the large March 9, 1998 eruption at La Fournaise volcano inferred by continuous MT monitoring

    NASA Astrophysics Data System (ADS)

    Wawrzyniak, Pierre; Zlotnicki, Jacques; Sailhac, Pascal; Marquis, Guy

    2017-11-01

    The 2645 m-high La Fournaise volcano, located in the Southwest of Réunion Island (Indian Ocean), is a shield basaltic volcano where effusive eruptions generally occur along long fissures starting from the summit, alongside major fractures that characterize the eruptions' dynamism and effusivity. Between 1992 and 1998, the volcano underwent a quiet period during which few earthquakes were recorded. Minor seismic activity returned after 1997 and picked up in March 1998 during the 35 h preceding the March 9 eruption. From 1996, two autonomous stations (CSV and BAV) were installed on the volcano. CSV was located inside the Enclos Fouqué caldera while BAV was positioned 8.2 km NW of the volcano summit. Horizontal components of the electric and magnetic fields were sampled every 20 s. Continuous time-series were available from 1996 to 1999 at CSV, and from 1997 to March 1998 at BAV. Data have been processed using both single-station and remote-reference processing. Both results show apparent resistivity variations synchronous to the eruption. Time-lapse impedance estimates are computed on overlapping time windows of about two days at both stations. The only major decrease of the observed impedance coincides with the March 1998 eruption. At CSV, the resistivity started to drop about five days before the eruption, reached several local minima until April, and then slowly increased as the volcanic crisis reduced in activity. After the end of the crisis in September 1998, the apparent resistivity recovered its pre-crisis value. The time-lapse results also show variability in directionality: sharp and elongated phase tensor ellipse residuals appear during the eruption with a N105° orientation, suggesting the emergence of an almost NS-striking dyke. A 1D background model built from MT soundings performed during the quiet period (1996 to February 1998) on which a 3D NS-striking dyke was added shows a good agreement with phase tensor residuals and spatial distribution of the resistivity variations observed during the eruption.

  3. Variation of total aroma and polyphenol content of dark chocolate during three phase of conching.

    PubMed

    Albak, F; Tekin, A R

    2016-01-01

    Variation in the volatiles, total polyphenol, theobromine and caffein was investigated both qualitatively and quantitatively for all phases of conching with GC/MS/SPME, HPLC, GC/O, and UV-visible spectrophotometry. The volatile compounds being identified during the three phases consisted of aldehydes, ketones, pyrazines, acids, alcohols and esters. The number and concentration of these compounds were observed to be 31-25,681 ppb, 44-34,838 ppb and 44-29,809 ppb in the dry, pasty, and liquid phases respectively. The odor of dark chocolate was described as nutty, sweet, caramel, green and chocolate using olfactometry. The percent decrease in the concentration of total polyphenol, caffein and theobromine was observed to be only 3.0, 11.0, and 32.0 respectively.

  4. Worldwide photometry and lightcurve observations of 16 Psyche during the 1975-1976 apparition

    NASA Technical Reports Server (NTRS)

    Tedesco, E. F.; Taylor, R. C.; Drummond, J.; Harwood, D.; Nickoloff, I.; Scaltriti, F.; Zappala, V.

    1983-01-01

    Twenty-six lightcurves of Psyche are presented together with UBV photometry and phase functions from 1975 and 1976. Combining photometric data from this opposition with those from previous apparitions resulted in a mean phase coefficient in V of 0.026 + or - 0.002 mag/deg. No significant phase-dependent variation in the U-B color could be determined from the data; the B-V color, however, displayed a reddening with phase of 0.0010 + or - 0.0004 mag/deg. It is concluded that compositional variations over Psyche's surface are minor, and that Psyche's opposition effect is typical of that for other well-observed asteroids. Psyche's behavior is accounted for if, to the first order, its shape is that of a triaxial ellipsoid with axial ratios near 5:4:3.

  5. Egg-laying substrate selection for optimal camouflage by quail.

    PubMed

    Lovell, P George; Ruxton, Graeme D; Langridge, Keri V; Spencer, Karen A

    2013-02-04

    Camouflage is conferred by background matching and disruption, which are both affected by microhabitat. However, microhabitat selection that enhances camouflage has only been demonstrated in species with discrete phenotypic morphs. For most animals, phenotypic variation is continuous; here we explore whether such individuals can select microhabitats to best exploit camouflage. We use substrate selection in a ground-nesting bird (Japanese quail, Coturnix japonica). For such species, threat from visual predators is high and egg appearance shows strong between-female variation. In quail, variation in appearance is particularly obvious in the amount of dark maculation on the light-colored shell. When given a choice, birds consistently selected laying substrates that made visual detection of their egg outline most challenging. However, the strategy for maximizing camouflage varied with the degree of egg maculation. Females laying heavily maculated eggs selected the substrate that more closely matched egg maculation color properties, leading to camouflage through disruptive coloration. For lightly maculated eggs, females chose a substrate that best matched their egg background coloration, suggesting background matching. Our results show that quail "know" their individual egg patterning and seek out a nest position that provides most effective camouflage for their individual phenotype. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Correlations of particle number concentrations and metals with nitrogen oxides and other traffic-related air pollutants in Glasgow and London

    NASA Astrophysics Data System (ADS)

    Sánchez Jiménez, Araceli; Heal, Mathew R.; Beverland, Iain J.

    2012-07-01

    Particle number concentration (PNC) and transition metal content are implicated in the health effects of airborne particulate matter (PM) but they are difficult to measure so consequently their temporal and spatial variations are not well characterized. Daily concentrations of PNC and particle-bound water-soluble metals (V, Cr, Mn, Fe, Ni, Cu, As, Cd and Pb) were measured at background and kerbside sites in Glasgow and London to examine if other metrics of air pollution such as optical darkness (absorbance) of collected filter samples of PM, gravimetric PM, and NO, NO2 and CO gas concentrations, can be used as surrogates for the temporal and spatial variations of the former. NO2 and NOx exhibited a high degree of within-site correlation and with PNC and water-soluble metals (Fe, Cu, As, Cd, Pb) at background sites in both cities. There is therefore potential to use NO2 and NOx as surrogates for PNC and water-soluble metal at background sites. However, correlation was weaker in complex street canyon environments where pollutant concentrations are strongly affected by local sources and the small-scale variations in pollutant dispersion induced by the wind regimes within street canyons. The corollary of the high correlation between NO2 and PNC and water-soluble metals at the background sites is that the latter pollutants may act as confounders for health effects attributed to NO2 from such sites. Concentrations of CO cannot be used as a surrogate for PNC. Increments in daily NOx and NO2 concentrations between trafficked and background sites were shown to be a simple and novel surrogate for daily spatial variation of PNC; for example, increments in NOx explained 78-79% of the variance in PNC at the paired sites in both Glasgow and London, but relationships were city specific. The increments in NOx also explained 70% of the spatial variation in Cu and Ni in Glasgow but not in London. Weekly NO2 measurements derived from passive diffusion tubes were also shown to correlate well with increments in PNC. A high temporal correlation between PNC and 1,3-butadiene and benzene (which can also be measured by passive sampler) implies that passive sampler measurements may be a straightforward tool for deriving long-term spatial patterns in PNC.

  7. Wavefront image sensor chip

    PubMed Central

    Cui, Xiquan; Ren, Jian; Tearney, Guillermo J.; Yang, Changhuei

    2010-01-01

    We report the implementation of an image sensor chip, termed wavefront image sensor chip (WIS), that can measure both intensity/amplitude and phase front variations of a light wave separately and quantitatively. By monitoring the tightly confined transmitted light spots through a circular aperture grid in a high Fresnel number regime, we can measure both intensity and phase front variations with a high sampling density (11 µm) and high sensitivity (the sensitivity of normalized phase gradient measurement is 0.1 mrad under the typical working condition). By using WIS in a standard microscope, we can collect both bright-field (transmitted light intensity) and normalized phase gradient images. Our experiments further demonstrate that the normalized phase gradient images of polystyrene microspheres, unstained and stained starfish embryos, and strongly birefringent potato starch granules are improved versions of their corresponding differential interference contrast (DIC) microscope images in that they are artifact-free and quantitative. Besides phase microscopy, WIS can benefit machine recognition, object ranging, and texture assessment for a variety of applications. PMID:20721059

  8. Chandler wobble: two more large phase jumps revealed

    NASA Astrophysics Data System (ADS)

    Malkin, Zinovy; Miller, Natalia

    2010-12-01

    Investigations of the anomalies in the Earth rotation, in particular, the polar motion components, play an important role in our understanding of the processes that drive changes in the Earth's surface, interior, atmosphere, and ocean. This paper is primarily aimed at investigation of the Chandler wobble (CW) at the whole available 163-year interval to search for the major CW amplitude and phase variations. First, the CW signal was extracted from the IERS (International Earth Rotation and Reference Systems Service) Pole coordinates time series using two digital filters: the singular spectrum analysis and Fourier transform. The CW amplitude and phase variations were examined by means of the wavelet transform and Hilbert transform. Results of our analysis have shown that, besides the well-known CW phase jump in the 1920s, two other large phase jumps have been found in the 1850s and 2000s. As in the 1920s, these phase jumps occurred contemporarily with a sharp decrease in the CW amplitude.

  9. PUBLIC HEALTH AIR SURVEILLANCE EVALUATION (PHASE): BACKGROUND AND AIR QUALITY ASPECT

    EPA Science Inventory

    NERL's Human Exposure and Atmospheric Sciences Division and other participants in the Public Health Air Surveillance Evaluation (PHASE) project will be discussing their results with the New York State Departments of Health and Environmental Conservation. The PHASE project is a ...

  10. Effect of concentration dependence of the diffusion coefficient on homogenization kinetics in multiphase binary alloy systems

    NASA Technical Reports Server (NTRS)

    Tenney, D. R.; Unnam, J.

    1978-01-01

    Diffusion calculations were performed to establish the conditions under which concentration dependence of the diffusion coefficient was important in single, two, and three phase binary alloy systems. Finite-difference solutions were obtained for each type of system using diffusion coefficient variations typical of those observed in real alloy systems. Solutions were also obtained using average diffusion coefficients determined by taking a logarithmic average of each diffusion coefficient variation considered. The constant diffusion coefficient solutions were used as reference in assessing diffusion coefficient variation effects. Calculations were performed for planar, cylindrical, and spherical geometries in order to compare the effect of diffusion coefficient variations with the effect of interface geometries. In most of the cases considered, the diffusion coefficient of the major-alloy phase was the key parameter that controlled the kinetics of interdiffusion.

  11. Satellite-based Estimates of Ambient Air Pollution and Global Variations in Childhood Asthma Prevalence

    NASA Technical Reports Server (NTRS)

    Anderson, H. Ross; Butland, Barbara K.; Donkelaar, Aaron Matthew Van; Brauer, Michael; Strachan, David P.; Clayton, Tadd; van Dingenen, Rita; Amann, Marcus; Brunekreef, Bert; Cohen, Aaron; hide

    2012-01-01

    Background: The effect of ambient air pollution on global variations and trends in asthma prevalence is unclear. Objectives: Our goal was to investigate community-level associations between asthma prevalence data from the International Study of Asthma and Allergies in Childhood (ISAAC) and satellite-based estimates of particulate matter with aerodynamic diameter < 2.5 microm (PM2.5) and nitrogen dioxide (NO2), and modelled estimates of ozone. Methods: We assigned satellite-based estimates of PM2.5 and NO2 at a spatial resolution of 0.1deg × 0.1deg and modeled estimates of ozone at a resolution of 1deg × 1deg to 183 ISAAC centers. We used center-level prevalence of severe asthma as the outcome and multilevel models to adjust for gross national income (GNI) and center- and country-level sex, climate, and population density. We examined associations (adjusting for GNI) between air pollution and asthma prevalence over time in centers with data from ISAAC Phase One (mid-1900s) and Phase Three (2001-2003). Results: For the 13- to 14-year age group (128 centers in 28 countries), the estimated average within-country change in center-level asthma prevalence per 100 children per 10% increase in center-level PM2.5 and NO2 was -0.043 [95% confidence interval (CI): -0.139, 0.053] and 0.017 (95% CI: -0.030, 0.064) respectively. For ozone the estimated change in prevalence per parts per billion by volume was -0.116 (95% CI: -0.234, 0.001). Equivalent results for the 6- to 7-year age group (83 centers in 20 countries), though slightly different, were not significantly positive. For the 13- to 14-year age group, change in center-level asthma prevalence over time per 100 children per 10% increase in PM2.5 from Phase One to Phase Three was -0.139 (95% CI: -0.347, 0.068). The corresponding association with ozone (per ppbV) was -0.171 (95% CI: -0.275, -0.067). Conclusion: In contrast to reports from within-community studies of individuals exposed to traffic pollution, we did not find evidence of a positive association between ambient air pollution and asthma prevalence as measured at the community level.

  12. Satellite-based Estimates of Ambient Air Pollution and Global Variations in Childhood Asthma Prevalence

    PubMed Central

    Butland, Barbara K.; van Donkelaar, Aaron; Brauer, Michael; Strachan, David P.; Clayton, Tadd; van Dingenen, Rita; Amann, Marcus; Brunekreef, Bert; Cohen, Aaron; Dentener, Frank; Lai, Christopher; Lamsal, Lok N.; Martin, Randall V.; One, ISAAC Phase

    2012-01-01

    Background: The effect of ambient air pollution on global variations and trends in asthma prevalence is unclear. Objectives: Our goal was to investigate community-level associations between asthma prevalence data from the International Study of Asthma and Allergies in Childhood (ISAAC) and satellite-based estimates of particulate matter with aerodynamic diameter < 2.5 µm (PM2.5) and nitrogen dioxide (NO2), and modelled estimates of ozone. Methods: We assigned satellite-based estimates of PM2.5 and NO2 at a spatial resolution of 0.1° × 0.1° and modeled estimates of ozone at a resolution of 1° × 1° to 183 ISAAC centers. We used center-level prevalence of severe asthma as the outcome and multilevel models to adjust for gross national income (GNI) and center- and country-level sex, climate, and population density. We examined associations (adjusting for GNI) between air pollution and asthma prevalence over time in centers with data from ISAAC Phase One (mid-1900s) and Phase Three (2001–2003). Results: For the 13- to 14-year age group (128 centers in 28 countries), the estimated average within-country change in center-level asthma prevalence per 100 children per 10% increase in center-level PM2.5 and NO2 was –0.043 [95% confidence interval (CI): –0.139, 0.053] and 0.017 (95% CI: –0.030, 0.064) respectively. For ozone the estimated change in prevalence per parts per billion by volume was –0.116 (95% CI: –0.234, 0.001). Equivalent results for the 6- to 7-year age group (83 centers in 20 countries), though slightly different, were not significantly positive. For the 13- to 14-year age group, change in center-level asthma prevalence over time per 100 children per 10% increase in PM2.5 from Phase One to Phase Three was –0.139 (95% CI: –0.347, 0.068). The corresponding association with ozone (per ppbV) was –0.171 (95% CI: –0.275, –0.067). Conclusion: In contrast to reports from within-community studies of individuals exposed to traffic pollution, we did not find evidence of a positive association between ambient air pollution and asthma prevalence as measured at the community level. PMID:22548921

  13. THERMAL PHASE VARIATIONS OF WASP-12b: DEFYING PREDICTIONS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cowan, Nicolas B.; Shekhtman, Louis M.; Machalek, Pavel

    2012-03-01

    We report Warm Spitzer full-orbit phase observations of WASP-12b at 3.6 and 4.5 {mu}m. This extremely inflated hot Jupiter is thought to be overflowing its Roche lobe, undergoing mass loss and accretion onto its host star, and has been claimed to have a C/O ratio in excess of unity. We are able to measure the transit depths, eclipse depths, thermal and ellipsoidal phase variations at both wavelengths. The large-amplitude phase variations, combined with the planet's previously measured dayside spectral energy distribution, are indicative of non-zero Bond albedo and very poor day-night heat redistribution. The transit depths in the mid-infrared-(R{sub p}more » /R{sub *}){sup 2} = 0.0123(3) and 0.0111(3) at 3.6 and 4.5 {mu}m, respectively-indicate that the atmospheric opacity is greater at 3.6 than at 4.5 {mu}m, in disagreement with model predictions, irrespective of C/O ratio. The secondary eclipse depths are consistent with previous studies: F{sub day}/F{sub *} = 0.0038(4) and 0.0039(3) at 3.6 and 4.5 {mu}m, respectively. We do not detect ellipsoidal variations at 3.6 {mu}m, but our parameter uncertainties-estimated via prayer-bead Monte Carlo-keep this non-detection consistent with model predictions. At 4.5 {mu}m, on the other hand, we detect ellipsoidal variations that are much stronger than predicted. If interpreted as a geometric effect due to the planet's elongated shape, these variations imply a 3:2 ratio for the planet's longest:shortest axes and a relatively bright day-night terminator. If we instead presume that the 4.5 {mu}m ellipsoidal variations are due to uncorrected systematic noise and we fix the amplitude of the variations to zero, the best-fit 4.5 {mu}m transit depth becomes commensurate with the 3.6 {mu}m depth, within the uncertainties. The relative transit depths are then consistent with a solar composition and short scale height at the terminator. Assuming zero ellipsoidal variations also yields a much deeper 4.5 {mu}m eclipse depth, consistent with a solar composition and modest temperature inversion. We suggest future observations that could distinguish between these two scenarios.« less

  14. Holographic anisotropic background with confinement-deconfinement phase transition

    NASA Astrophysics Data System (ADS)

    Aref'eva, Irina; Rannu, Kristina

    2018-05-01

    We present new anisotropic black brane solutions in 5D Einstein-dilaton-two-Maxwell system. The anisotropic background is specified by an arbitrary dynamical exponent ν, a nontrivial warp factor, a non-zero dilaton field, a non-zero time component of the first Maxwell field and a non-zero longitudinal magnetic component of the second Maxwell field. The blackening function supports the Van der Waals-like phase transition between small and large black holes for a suitable first Maxwell field charge. The isotropic case corresponding to ν = 1 and zero magnetic field reproduces previously known solutions. We investigate the anisotropy influence on the thermodynamic properties of our background, in particular, on the small/large black holes phase transition diagram. We discuss applications of the model to the bottom-up holographic QCD. The RG flow interpolates between the UV section with two suppressed transversal coordinates and the IR section with the suppressed time and longitudinal coordinates due to anisotropic character of our solution. We study the temporal Wilson loops, extended in longitudinal and transversal directions, by calculating the minimal surfaces of the corresponding probing open string world-sheet in anisotropic backgrounds with various temperatures and chemical potentials. We find that dynamical wall locations depend on the orientation of the quark pairs, that gives a crossover transition line between confinement/deconfinement phases in the dual gauge theory. Instability of the background leads to the appearance of the critical points ( μ ϑ,b , T ϑ,b ) depending on the orientation ϑ of quark-antiquark pairs in respect to the heavy ions collision line.

  15. What have we learned from brucellosis in the mouse model?

    PubMed Central

    2012-01-01

    Brucellosis is a zoonosis caused by Brucella species. Brucellosis research in natural hosts is often precluded by practical, economical and ethical reasons and mice are widely used. However, mice are not natural Brucella hosts and the course of murine brucellosis depends on bacterial strain virulence, dose and inoculation route as well as breed, genetic background, age, sex and physiological statu of mice. Therefore, meaningful experiments require a definition of these variables. Brucella spleen replication profiles are highly reproducible and course in four phases: i), onset or spleen colonization (first 48 h); ii), acute phase, from the third day to the time when bacteria reach maximal numbers; iii), chronic steady phase, where bacterial numbers plateaus; and iv), chronic declining phase, during which brucellae are eliminated. This pattern displays clear physiopathological signs and is sensitive to small virulence variations, making possible to assess attenuation when fully virulent bacteria are used as controls. Similarly, immunity studies using mice with known defects are possible. Mutations affecting INF-γ, TLR9, Myd88, Tγδ and TNF-β favor Brucella replication; whereas IL-1β, IL-18, TLR4, TLR5, TLR2, NOD1, NOD2, GM-CSF, IL/17r, Rip2, TRIF, NK or Nramp1 deficiencies have no noticeable effects. Splenomegaly development is also useful: it correlates with IFN-γ and IL-12 levels and with Brucella strain virulence. The genetic background is also important: Brucella-resistant mice (C57BL) yield lower splenic bacterial replication and less splenomegaly than susceptible breeds. When inoculum is increased, a saturating dose above which bacterial numbers per organ do not augment, is reached. Unlike many gram-negative bacteria, lethal doses are large (≥ 108 bacteria/mouse) and normally higher than the saturating dose. Persistence is a useful virulence/attenuation index and is used in vaccine (Residual Virulence) quality control. Vaccine candidates are also often tested in mice by determining splenic Brucella numbers after challenging with appropriate virulent brucellae doses at precise post-vaccination times. Since most live or killed Brucella vaccines provide some protection in mice, controls immunized with reference vaccines (S19 or Rev1) are critical. Finally, mice have been successfully used to evaluate brucellosis therapies. It is concluded that, when used properly, the mouse is a valuable brucellosis model. PMID:22500859

  16. Imaging subtle microstructural variations in ceramics with precision ultrasonic velocity and attenuation measurements

    NASA Technical Reports Server (NTRS)

    Generazio, Edward R.; Roth, Don J.; Baaklini, George Y.

    1987-01-01

    Acoustic images of a silicon carbide ceramic disk were obtained using a precision scanning contact pulse echo technique. Phase and cross-correlation velocity, and attenuation maps were used to form color images of microstructural variations. These acoustic images reveal microstructural variations not observable with X-ray radiography.

  17. Intraseasonal to interannual variations in the tropical wave activity revealed in reanalyses and their potential impact on the QBO

    NASA Astrophysics Data System (ADS)

    Kim, Young-Ha; Yoo, Changhyun

    2017-04-01

    We investigate activities of tropical waves represented in reanalysis products. The wave activities are quantified by the Eliassen-Palm (EP) flux at 100 hPa, after decomposed into the following four components: equatorially trapped Kelvin waves and mixed Rossby-gravity waves, gravity waves, and Rossby waves. Monthly EP fluxes of the four waves exhibit considerable temporal variations at intraseasonal and interannual, along with seasonal, time scales. These variations are discussed with the tropical large-scale variabilities, including the Madden-Julian Oscillation (MJO), the El Ninõ-Southern Oscillation, and the stratospheric quasi-biennial oscillation (QBO). We find that during boreal winter, the interannual variation of Kelvin wave activity is in phase with that of the MJO amplitude, while such a simultaneous variation cannot be seen in other seasons. The gravity wave is dominated by a semi-annual cycle, while the departure from its semi-annual cycle is largely correlated with the QBO phase in the stratosphere. Potential impacts of the variations in the wave activity upon the QBO properties will be assessed using a simple one-dimensional QBO model.

  18. Variations of stress fields in the Tunka Rift of the southwestern Baikal region

    NASA Astrophysics Data System (ADS)

    Lunina, O. V.; Gladkov, A. S.; Sherman, S. I.

    2007-05-01

    The stress fields in the Tunka Rift at the southwestern flank of the Baikal Rift Zone are reconstructed and analyzed on the basis of a detailed study of fracturing. The variation of these fields is of a systematic character and is caused by a complex morphological and fault-block structure of the studied territory. The rift was formed under conditions of oblique (relative to its axis) regional NW-SE extension against the background of three ancient tectonic boundaries (Sayan, Baikal, and Tuva-Mongolian) oriented in different directions. Such a geological history resulted in the development of several en echelon arranged local basins and interbasinal uplifted blocks, the strike-slip component of faulting, and the mosaic distribution of various stress fields with variable orientation of their principal vectors. The opening of basins was promoted by stress fields of a lower hierarchical rank with a near-meridional tension axis. The stress field in the western Tunka Rift near the Mondy and Turan basins is substantially complicated because the transform movements, which are responsible for the opening of the N-S-trending rift basins in Mongolia, become important as Lake Hövsgöl is approached. It is concluded that, for the most part, the Tunka Rift has not undergone multistage variation of its stress state since the Oligocene, the exception being a compression phase in the late Miocene and early Pliocene, which could be related to continental collision of the Eurasian and Indian plates. Later on, the Tunka Rift continued its tectonic evolution in the transtensional regime.

  19. Reproduction of a higher-order circular harmonic field using a linear array of loudspeakers.

    PubMed

    Lee, Jung-Min; Choi, Jung-Woo; Kim, Yang-Hann

    2015-03-01

    This paper presents a direct formula for reproducing a sound field consisting of higher-order circular harmonics with polar phase variation. Sound fields with phase variation can be used for synthesizing various spatial attributes, such as the perceived width or the location of a virtual sound source. To reproduce such a sound field using a linear loudspeaker array, the driving function of the array is derived in the format of an integral formula. The proposed function shows fewer reproduction errors than a conventional formula focused on magnitude variations. In addition, analysis of the sweet spot reveals that its shape can be asymmetric, depending on the order of harmonics.

  20. Model of an axially strained weakly guiding optical fiber modal pattern

    NASA Technical Reports Server (NTRS)

    Egalon, Claudio O.; Rogowski, Robert S.

    1991-01-01

    Axial strain may be determined by monitoring the modal pattern variation of an optical fiber. In this paper we present the results of a numerical model that has been developed to calculate the modal pattern variation at the end of a weakly guiding optical fiber under axial strain. Whenever an optical fiber is under stress, the optical path length, the index of refraction and the propagation constants of each fiber mode change. In consequence, the modal phase term of the fields and the fiber output pattern are also modified. For multimode fibers, very complicated patterns result. The predicted patterns are presented, and an expression for the phase variation with strain is derived.

  1. Observation of subsecond variations in auroral region total electron content using 100 Hz sampling of GPS observables

    NASA Astrophysics Data System (ADS)

    McCaffrey, A. M.; Jayachandran, P. T.

    2017-06-01

    First ever auroral region total electron content (TEC) measurements at 100 Hz using a Septentrio PolaRxS Pro receiver are analyzed to discover ionospheric signatures which would otherwise be unobtainable with the frequently used lower sampling rates. Two types of variations are observed: small-magnitude (amplitude) variations, which are present consistently throughout the data set, and larger-magnitude (amplitude) variations, which are less frequent. Small-amplitude TEC fluctuations are accounted for by the receiver phase jitter. However, estimated secondary ionospheric effects in the calculation of TEC and the receiver phase jitter were unable to account for the larger-amplitude TEC fluctuations. These variations are also accompanied by fluctuations in the magnetic field, which seems to indicate that these fluctuations are real and of geophysical significance. This paper presents a technique and the capability of high-rate TEC measurements in the study of auroral dynamics. Further detailed study is needed to identify the cause of these subsecond TEC fluctuations and associated magnetic field fluctuations.

  2. Improving reliability of a residency interview process.

    PubMed

    Peeters, Michael J; Serres, Michelle L; Gundrum, Todd E

    2013-10-14

    To improve the reliability and discrimination of a pharmacy resident interview evaluation form, and thereby improve the reliability of the interview process. In phase 1 of the study, authors used a Many-Facet Rasch Measurement model to optimize an existing evaluation form for reliability and discrimination. In phase 2, interviewer pairs used the modified evaluation form within 4 separate interview stations. In phase 3, 8 interviewers individually-evaluated each candidate in one-on-one interviews. In phase 1, the evaluation form had a reliability of 0.98 with person separation of 6.56; reproducibly, the form separated applicants into 6 distinct groups. Using that form in phase 2 and 3, our largest variation source was candidates, while content specificity was the next largest variation source. The phase 2 g-coefficient was 0.787, while confirmatory phase 3 was 0.922. Process reliability improved with more stations despite fewer interviewers per station-impact of content specificity was greatly reduced with more interview stations. A more reliable, discriminating evaluation form was developed to evaluate candidates during resident interviews, and a process was designed that reduced the impact from content specificity.

  3. Coherent Raman Imaging of Live Muscle Sarcomeres Assisted by SFG Microscopy.

    PubMed

    Kim, Hyunmin; Kim, Do-Young; Joo, Kyung-Il; Kim, Jung-Hye; Jeong, Soon Moon; Lee, Eun Seong; Hahm, Jeong-Hoon; Kim, Kyuhyung; Moon, Dae Woon

    2017-08-23

    In this study, we used spectrally focused coherent anti-Stokes Raman scattering (spCARS) microscopy assisted by sum-frequency generation (SFG) to monitor the variations in the structural morphology and molecular vibrations of a live muscle of Caenorhabditis elegans. The subunits of the muscle sarcomeres, such as the M-line, myosin, dense body, and α-actinin, were alternatively observed using spCARS microscopy for different sample orientations, with the guidance of a myosin positional marker captured by SFG microscopy. Interestingly enough, the beam polarization dependence of the spCARS contrasts for two parallel subunits (dense body and myosin) showed a ~90° phase difference. The chemically sensitive spCARS spectra induced by the time-varying overlap of two pulses allowed (after a robust subtraction of the non-resonant background using a modified Kramers-Krönig transformation method) high-fidelity detection of various genetically modified muscle sarcomeres tuned to the C-H vibration (2800-3100 cm -1 ). Conversely, SFG image mapping assisted by phase-retrieved spCARS spectra also facilitated label-free monitoring of the changes in the muscle content of C. elegans that are associated with aging, based on the hypothesis that the C-H vibrational modes could serve as qualitative chemical markers sensitive to the amount and/or structural modulation of the muscle.

  4. Strategic Petroleum Reserve, West Hackberry oil storage cavern fire and spill of September 21, 1978: an environmental assessment. Final report

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Taylor, A

    1980-02-29

    This report summarizes an environmental assessment of the fire and oil spill at the Strategic Petroleum Reserve site, West Hackberry, Louisiana. Subjective identification of oil contaminated habitats was supported by a more rigorous classification of samples utilizing discriminant analysis. Fourteen contaminated stations were identified along the shore of Black Lake just north and west of Wellpad 6, encompassing approximately 9 hectares. Seasonal variation in the structures of marsh and lake bottom communities in this contaminated area were not generally distinguishable from that of similar communities in uncontaminated habitats along the southern and southeastern shores of Black Lake. The major impactmore » of spilled oil on the marsh vegetation was to accelerate the natural marsh deterioration which will eventually impact animals dependent on marsh vegetation for habitat structure. Vanadium, the predominate trace metal in the oil, and pyrogenic products due to the fire were found at the most distant sampling site (5 km) from Cavern 6 during Phase I, but were not detected downwind of the fire in excess of background levels in the later phases. Remote sensing evaluation of vegetation under the plume also indicated that stress existed immediately after the fire, but had disappeared by the end of the 1-year survey.« less

  5. Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains

    PubMed Central

    2011-01-01

    Background Saccharomyces cerevisiae (Baker's yeast) is found in diverse ecological niches and is characterized by high adaptive potential under challenging environments. In spite of recent advances on the study of yeast genome diversity, little is known about the underlying gene expression plasticity. In order to shed new light onto this biological question, we have compared transcriptome profiles of five environmental isolates, clinical and laboratorial strains at different time points of fermentation in synthetic must medium, during exponential and stationary growth phases. Results Our data unveiled diversity in both intensity and timing of gene expression. Genes involved in glucose metabolism and in the stress response elicited during fermentation were among the most variable. This gene expression diversity increased at the onset of stationary phase (diauxic shift). Environmental isolates showed lower average transcript abundance of genes involved in the stress response, assimilation of nitrogen and vitamins, and sulphur metabolism, than other strains. Nitrogen metabolism genes showed significant variation in expression among the environmental isolates. Conclusions Wild type yeast strains respond differentially to the stress imposed by nutrient depletion, ethanol accumulation and cell density increase, during fermentation of glucose in synthetic must medium. Our results support previous data showing that gene expression variability is a source of phenotypic diversity among closely related organisms. PMID:21507216

  6. Lunar Phase Function at 1064 Nm from Lunar Orbiter Laser Altimeter Passive and Active Radiometry

    NASA Technical Reports Server (NTRS)

    Barker, M. K.; Sun, X.; Mazarico, E.; Neumann, G. A.; Zuber, M. T.; Smith, D. E.

    2016-01-01

    We present initial calibration and results of passive radiometry collected by the Lunar Orbiter Laser Altimeter onboard the Lunar Reconnaissance Orbiter over the course of 12 months. After correcting for time- and temperature-dependent dark noise and detector responsivity variations, the LOLA passive radiometry measurements are brought onto the absolute radiance scale of the SELENE Spectral Profiler. The resulting photometric precision is estimated to be 5%. We leverage the unique ability of LOLA to measure normal albedo to explore the 1064 nm phase function's dependence on various geologic parameters. On a global scale, we find that iron abundance and optical maturity (quantified by FeO and OMAT) are the dominant controlling parameters. Titanium abundance (TiO2), surface roughness on decimeter to decameter scales, and soil thermo- physical properties have a smaller effect, but the latter two are correlated with OMAT, indicating that exposure age is the driving force behind their effects in a globally-averaged sense. The phase function also exhibits a dependence on surface slope at approximately 300 m baselines, possibly the result of mass wasting exposing immature material and/or less space weathering due to reduced sky visibility. Modeling the photometric function in the Hapke framework, we find that, relative to the highlands, the maria exhibit decreased backscattering, a smaller opposition effect (OE) width, and a smaller OE amplitude. Immature highlands regolith has a higher backscattering fraction and a larger OE width compared to mature highlands regolith. Within the maria, the backscattering fraction and OE width show little dependence on TiO2 and OMAT. Variations in the phase function shape at large phase angles are observed in and around the Copernican-aged Jackson crater, including its dark halo, a putative impact melt deposit. Finally, the phase function of the Reiner Gamma Formation behaves more optically immature than is typical for its composition and OMAT, suggesting the visible-to-near-infrared spectrum and phase function respond differently to the unusual regolith evolution and properties at this location. The phase difference map revealed additional geologically-influenced variations in the phase function's shape. In particular, variations were observed associated with the dark halo around Jackson crater, the impact ejecta of Copernicus and Giordano Bruno, and the Reiner Gamma Formation. For the latter, we 915 found that the phase function behaves more optically immature than the global phase function for its composition and OMAT, suggesting a difference in how the visible-to-near-IR spectrum and phase function respond to the unusual regolith evolution and properties at this location.

  7. Characterization and Prediction of the SPI Background

    NASA Technical Reports Server (NTRS)

    Teegarden, B. J.; Jean, P.; Knodlseder, J.; Skinner, G. K.; Weidenspointer, G.

    2003-01-01

    The INTEGRAL Spectrometer, like most gamma-ray instruments, is background dominated. Signal-to-background ratios of a few percent are typical. The background is primarily due to interactions of cosmic rays in the instrument and spacecraft. It characteristically varies by +/- 5% on time scales of days. This variation is caused mainly by fluctuations in the interplanetary magnetic field that modulates the cosmic ray intensity. To achieve the maximum performance from SPI it is essential to have a high quality model of this background that can predict its value to a fraction of a percent. In this poster we characterize the background and its variability, explore various models, and evaluate the accuracy of their predictions.

  8. Review of approaches to the recording of background lesions in toxicologic pathology studies in rats.

    PubMed

    McInnes, E F; Scudamore, C L

    2014-08-17

    Pathological evaluation of lesions caused directly by xenobiotic treatment must always take into account the recognition of background (incidental) findings. Background lesions can be congenital or hereditary, histological variations, changes related to trauma or normal aging and physiologic or hormonal changes. This review focuses on the importance and correct approach to recording of background changes and includes discussion on sources of variability in background changes, the correct use of terminology, the concept of thresholds, historical control data, diagnostic drift, blind reading of slides, scoring and artifacts. The review is illustrated with background lesions in Sprague Dawley and Wistar rats. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  9. Phase calibration target for quantitative phase imaging with ptychography.

    PubMed

    Godden, T M; Muñiz-Piniella, A; Claverley, J D; Yacoot, A; Humphry, M J

    2016-04-04

    Quantitative phase imaging (QPI) utilizes refractive index and thickness variations that lead to optical phase shifts. This gives contrast to images of transparent objects. In quantitative biology, phase images are used to accurately segment cells and calculate properties such as dry mass, volume and proliferation rate. The fidelity of the measured phase shifts is of critical importance in this field. However to date, there has been no standardized method for characterizing the performance of phase imaging systems. Consequently, there is an increasing need for protocols to test the performance of phase imaging systems using well-defined phase calibration and resolution targets. In this work, we present a candidate for a standardized phase resolution target, and measurement protocol for the determination of the transfer of spatial frequencies, and sensitivity of a phase imaging system. The target has been carefully designed to contain well-defined depth variations over a broadband range of spatial frequencies. In order to demonstrate the utility of the target, we measure quantitative phase images on a ptychographic microscope, and compare the measured optical phase shifts with Atomic Force Microscopy (AFM) topography maps and surface profile measurements from coherence scanning interferometry. The results show that ptychography has fully quantitative nanometer sensitivity in optical path differences over a broadband range of spatial frequencies for feature sizes ranging from micrometers to hundreds of micrometers.

  10. Design and implementation of an air monitoring program in support of a brownfields redevelopment program

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Maisel, B.E.; Hunt, G.T.; Devaney, R.J. Jr.

    EPA`s Brownfields Economic Redevelopment Initiative has sparked renewal of industrial and commercial parcels otherwise idled or under-utilized because of real or perceived environmental contamination. In certain cases, restoring such parcels to productive economic use requires a redevelopment effort protective of human health and welfare through minimizing offsite migration of environmental contaminants during cleanup, demolition and remediation activities. To support these objectives, an air monitoring program is often required as an integral element of a comprehensive brownfields redevelopment effort. This paper presents a strategic framework for design and execution of an ambient air monitoring program in support of a brownfields remediationmore » effort ongoing in Lawrence, MA. Based on site characterization, the program included sample collection and laboratory analysis of ambient air samples for polychlorinated biphenyls (PCBs), polychlorinated dibenzodioxins and polychlorinated dibenzofurans (PCDDs/PCDFs), total suspended particulate (TSP), inhalable particulate (PM10), and lead. The program included four monitoring phases, identified as background, wintertime, demolition/remediation and post-demolition. Air sampling occurred over a 16 month period during 1996--97, during which time nine sampling locations were utilized to produce approximately 1,500 ambient air samples. Following strict data review and validation procedures, ambient air data interpretation focused on the following: evaluation of upwind/downwind sample pairs, comparison of ambient levels to existing regulatory standards, relation of ambient levels to data reported in the open literature, and, determination of normal seasonal variations in existing background burden, comparison of ambient levels measured during site activity to background levels.« less

  11. A further contribution to the seasonal variation of weighted mean temperature

    NASA Astrophysics Data System (ADS)

    Ding, Maohua; Hu, Wusheng

    2017-12-01

    The weighted mean temperature Tm is a variable parameter in the Global Navigation Satellite System (GNSS) meteorology and the Askne-Nordius zenith wet delay (ZWD) model. Some parameters about the Tm seasonal variation (e.g. the annual mean value, the annual range, the annual and semi-annual amplitudes, and the long-term trend) were discussed before. In this study, some additional results about the Tm seasonal variation on a global scale were found by using the Tm time series at 309 global radiosonde sites. Periodic signals of the annual and semi-annual variations were detected in these Tm time series by using the Lomb-Scargle periodogram. The annual variation is the main component of the periodic Tm in non-tropical regions, while the annual variation or the semiannual variation can be the main component of the periodic Tm in tropics. The mean annual Tm almost keeps constant with the increasing latitude in tropics, while it decreases with the increasing latitude in non-tropical regions. From a global perspective, Tm has an increasing trend of 0.22 K/decade on average, which may be caused by the global warming effects. The annual phase is almost found in about January for the non-tropical regions of the Southern Hemisphere and in about July for the non-tropical regions of the Northern Hemisphere, but it has no clear symmetry in tropics. Unlike the annual phase, the geographical distributions of semi-annual phase do not follow obvious rules. In non-tropical regions, the maximum and minimum Tm of the seasonal model are usually found in respective summer and winter days while the maximum and minimum Tm are distributed over a whole year but not in any fixed seasons for tropical regions. The seasonal model errors increase with the increasing value of annual amplitude. A primary reason for the irregular seasonal variation in tropics is that Tm has rather small variations in this region.

  12. Effect of structural in-depth heterogeneities on electrical properties of Pb(Zr0.52Ti0.48) O3 thin films as revealed by nano-beam X-ray diffraction

    NASA Astrophysics Data System (ADS)

    Vaxelaire, N.; Kovacova, V.; Bernasconi, A.; Le Rhun, G.; Alvarez-Murga, M.; Vaughan, G. B. M.; Defay, E.; Gergaud, P.

    2016-09-01

    A direct quantification of a structural in-depth composition in the lead zirconate titanate Pb(Zr,Ti)O3 thin films of morphotropic composition has been conducted using the newly available X-ray nano-pencil beam (i.e., beam size of 100 nm × 1 μm) diffraction approach. We tested two samples with different Zr/Ti chemical gradients. Here, we demonstrate the presence of a significant microstructural gradient between the rhombohedral and tetragonal phases through PbZrxTi1-xO3 (PZT) films with a 100 nm in-depth resolution. The phase gradient extends over around 350 nm, and it is repeated through the PZT film three times, which corresponds to the number of thermal annealings. Moreover, this microstructural gradient is in agreement with the Zr/Ti chemical gradient observed by the secondary ion mass spectroscopy (SIMS). Indeed, the quantity of tetragonal phases rises in the Ti-rich zones as revealed by SIMS, and the quantity of rhombohedral phases rises in the Zr-rich zones. We also demonstrated a huge difference in the in-depth phase variation between the two tested samples. The gradient free sample still contains 4.7% of phase variation through the film and the amplified gradient contains 9.6% of phase variation through the film. Knowing that the gradient free sample shows better electric and piezoelectric coefficients, one can draw a correlation between the chemical composition, crystallographic homogeneity, and electro-mechanical properties of the film. The more close the film is to the morphotropic composition and the more it is crystallographically homogeneous, the higher the piezoelectric coefficients of the PZT are. Finally, the adequate knowledge of phase variation and its relation to the fabrication technique are crucial for the enhancement of the PZT electro-mechanical properties. Our methodology and findings open up new perspectives in establishing a relevant quantitative feedback to reach an ultimate electro-mechanical coupling in the sol-gel PZT thin films.

  13. Determination of haplotypes at structurally complex regions using emulsion haplotype fusion PCR

    PubMed Central

    2012-01-01

    Background Genotyping and massively-parallel sequencing projects result in a vast amount of diploid data that is only rarely resolved into its constituent haplotypes. It is nevertheless this phased information that is transmitted from one generation to the next and is most directly associated with biological function and the genetic causes of biological effects. Despite progress made in genome-wide sequencing and phasing algorithms and methods, problems assembling (and reconstructing linear haplotypes in) regions of repetitive DNA and structural variation remain. These dynamic and structurally complex regions are often poorly understood from a sequence point of view. Regions such as these that are highly similar in their sequence tend to be collapsed onto the genome assembly. This is turn means downstream determination of the true sequence haplotype in these regions poses a particular challenge. For structurally complex regions, a more focussed approach to assembling haplotypes may be required. Results In order to investigate reconstruction of spatial information at structurally complex regions, we have used an emulsion haplotype fusion PCR approach to reproducibly link sequences of up to 1kb in length to allow phasing of multiple variants from neighbouring loci, using allele-specific PCR and sequencing to detect the phase. By using emulsion systems linking flanking regions to amplicons within the CNV, this led to the reconstruction of a 59kb haplotype across the DEFA1A3 CNV in HapMap individuals. Conclusion This study has demonstrated a novel use for emulsion haplotype fusion PCR in addressing the issue of reconstructing structural haplotypes at multiallelic copy variable regions, using the DEFA1A3 locus as an example. PMID:23231411

  14. Experimentally reduced root–microbe interactions reveal limited plasticity in functional root traits in Acer and Quercus

    USDA-ARS?s Scientific Manuscript database

    Abstract. Background and Aims Interactions between roots and soil microbes are critical components of below-ground ecology. It is essential to quantify the magnitude of root trait variation both among and within species, including variation due to plasticity. In addition to contextualizing the mag...

  15. A study of vertebra number in pigs confirms the association of vertnin and reveals additional QTL

    USDA-ARS?s Scientific Manuscript database

    Background: Formation of the vertebral column is a critical developmental stage in mammals. The strict control of this process has resulted in little variation in number of vertebrae across mammalian species and no variation within most mammalian species. The pig is quite unique as considerable vari...

  16. Disparities in HPV and Cervical Cancer Screening between Highly Educated White and Minority Young Women

    ERIC Educational Resources Information Center

    Bennefield, Zinobia C.

    2015-01-01

    Background: Research has been conducted to determine the impact that education has on health behaviors; specifically, comparisons between highly educated and less educated groups. However, little research has been done on the racial variation among highly educated women. Purpose: This research examined the racial variation in the relationship…

  17. Inferring the background traffic arrival process in the Internet.

    PubMed

    Hága, Péter; Csabai, István; Vattay, Gábor

    2009-12-01

    Phase transition has been found in many complex interactivity systems. Complex networks are not exception either but there are quite few real systems where we can directly understand the emergence of this nontrivial behavior from the microscopic view. In this paper, we present the emergence of the phase transition between the congested and uncongested phases of a network link. We demonstrate a method to infer the background traffic arrival process, which is one of the key state parameters of the Internet traffic. The traffic arrival process in the Internet has been investigated in several studies, since the recognition of its self-similar nature. The statistical properties of the traffic arrival process are very important since they are fundamental in modeling the dynamical behavior. Here, we demonstrate how the widely used packet train technique can be used to determine the main properties of the traffic arrival process. We show that the packet train dispersion is sensitive to the congestion on the network path. We introduce the packet train stretch as an order parameter to describe the phase transition between the congested and uncongested phases of the bottleneck link in the path. We find that the distribution of the background traffic arrival process can be determined from the average packet train dispersion at the critical point of the system.

  18. Analysis of Alpha Backgrounds in DarkSide-50

    NASA Astrophysics Data System (ADS)

    Monte, Alissa; DarkSide Collaboration

    2017-01-01

    DarkSide-50 is the current phase of the DarkSide direct dark matter search program, operating underground at the Laboratori Nazionali del Gran Sasso in Italy. The detector is a dual-phase argon Time Projection Chamber (TPC), designed for direct detection of Weakly Interacting Massive Particles, and housed within an active veto system of liquid scintillator and water Cherenkov detectors. Since switching to a target of low radioactivity argon extracted from underground sources in April, 2016, the background is no longer dominated by naturally occurring 39Ar. However, alpha backgrounds from radon and its daughters remain, both from the liquid argon bulk and internal detector surfaces. I will present details of the analysis used to understand and quantify alpha backgrounds, as well as to understand other types of radon contamination that may be present, and our sensitivity to them.

  19. LArGe: active background suppression using argon scintillation for the Gerda 0ν β β -experiment

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Barnabé-Heider, M.; Budjáš, D.; Cattadori, C.; Gangapshev, A.; Gusev, K.; Heisel, M.; Junker, M.; Klimenko, A.; Lubashevskiy, A.; Pelczar, K.; Schönert, S.; Smolnikov, A.; Zuzel, G.

    2015-10-01

    LArGe is a Gerda low-background test facility to study novel background suppression methods in a low-background environment, for future application in the Gerda experiment. Similar to Gerda, LArGe operates bare germanium detectors submersed into liquid argon (1 m^3, 1.4 tons), which in addition is instrumented with photomultipliers to detect argon scintillation light. The scintillation signals are used in anti-coincidence with the germanium detectors to effectively suppress background events that deposit energy in the liquid argon. The background suppression efficiency was studied in combination with a pulse shape discrimination (PSD) technique using a BEGe detector for various sources, which represent characteristic backgrounds to Gerda. Suppression factors of a few times 10^3 have been achieved. First background data of LArGe with a coaxial HPGe detector (without PSD) yield a background index of (0.12-4.6)× 10^{-2} cts/(keV kg year) (90 % C.L.), which is at the level of Gerda Phase I. Furthermore, for the first time we monitor the natural ^{42}Ar abundance (parallel to Gerda), and have indication for the 2ν β β -decay in natural germanium. These results show the effectivity of an active liquid argon veto in an ultra-low background environment. As a consequence, the implementation of a liquid argon veto in Gerda Phase II is pursued.

  20. Possible daily and seasonal variations in quantum interference induced by Chern-Simons gravity.

    PubMed

    Okawara, Hiroki; Yamada, Kei; Asada, Hideki

    2012-12-07

    Possible effects of Chern-Simons (CS) gravity on a quantum interferometer turn out to be dependent on the latitude and direction of the interferometer on Earth in orbital motion around the Sun. Daily and seasonal variations in phase shifts are predicted with an estimate of the size of the effects, wherefore neutron interferometry with ~5 m arm length and ~10(-4) phase measurement accuracy would place a bound on a CS parameter comparable to the Gravity Probe B satellite.

  1. Geographic Differences in Time to Culture Conversion in Liquid Media: Tuberculosis Trials Consortium Study 28. Culture Conversion Is Delayed in Africa

    PubMed Central

    Mac Kenzie, William R.; Heilig, Charles M.; Bozeman, Lorna; Johnson, John L.; Muzanye, Grace; Dunbar, Denise; Jost, Kenneth C.; Diem, Lois; Metchock, Beverly; Eisenach, Kathleen; Dorman, Susan; Goldberg, Stefan

    2011-01-01

    Background Tuberculosis Trials Consortium Study 28, was a double blind, randomized, placebo-controlled, phase 2 clinical trial examining smear positive pulmonary Mycobacterium tuberculosis. Over the course of intensive phase therapy, patients from African sites had substantially delayed and lower rates of culture conversion to negative in liquid media compared to non-African patients. We explored potential explanations of this finding. Methods In TBTC Study 28, protocol-correct patients (n = 328) provided spot sputum specimens for M. tuberculosis culture in liquid media, at baseline and weeks 2, 4, 6 and 8 of study therapy. We compared sputum culture conversion for African and non-African patients stratified by four baseline measures of disease severity: AFB smear quantification, extent of disease on chest radiograph, cavity size and the number of days to detection of M. tuberculosis in liquid media using the Kaplan-Meier product-limit method. We evaluated specimen processing and culture procedures used at 29 study laboratories serving 27 sites. Results African TB patients had more extensive disease at enrollment than non-African patients. However, African patients with the least disease by the 4 measures of disease severity had conversion rates on liquid media that were substantially lower than conversion rates in non-African patients with the greatest extent of disease. HIV infection, smoking and diabetes did not explain delayed conversion in Africa. Some inter-site variation in laboratory processing and culture procedures within accepted practice for clinical diagnostic laboratories was found. Conclusions Compared with patients from non-African sites, African patients being treated for TB had delayed sputum culture conversion and lower sputum conversion rates in liquid media that were not explained by baseline severity of disease, HIV status, age, smoking, diabetes or race. Further investigation is warranted into whether modest variation in laboratory processes substantially influences the efficacy outcomes of phase 2 TB treatment trials or if other factors (e.g., nutrition, host response) are involved. Trial Registration ClinicalTrials.gov NCT00144417 PMID:21494548

  2. Investigation of spatial and historical variations of air pollution around an industrial region using trace and macro elements in tree components.

    PubMed

    Odabasi, Mustafa; Tolunay, Doganay; Kara, Melik; Ozgunerge Falay, Ezgi; Tuna, Gizem; Altiok, Hasan; Dumanoglu, Yetkin; Bayram, Abdurrahman; Elbir, Tolga

    2016-04-15

    Several trace and macro elements (n=48) were measured in pine needle, branch, bark, tree ring, litter, and soil samples collected at 27 sites (21 industrial, 6 background) to investigate their spatial and historical variation in Aliaga industrial region in Turkey. Concentrations generally decreased with distance from the sources and the lowest ones were measured at background sites far from major sources. Spatial distribution of anthropogenic trace elements indicated that their major sources in the region are the iron-steel plants, ship-breaking activities and the petroleum refinery. Patterns of 40 elements that were detected in most of the samples were also evaluated to assess their suitability for investigation of historical variations. Observed increasing trends of several trace and macro elements (As, Cr, Fe, Mo, Ni, V, Cu, Pb, Sb, Sn, and Hg) in the tree-ring samples were representative for the variations in anthropogenic emissions and resulting atmospheric concentrations in Aliaga region. It was shown that lanthanides (La, Ce, Pr, Nd, Sm, Gd, Dy, Er, Yb) could also be used for the investigation of historical variations due to specific industrial emissions (i.e., petroleum refining). Results of the present study showed that tree components, litter, and soil could be used to determine the spatial variations of atmospheric pollution in a region while tree rings could be used to assess the historical variations. Copyright © 2016 Elsevier B.V. All rights reserved.

  3. Generalized Background Error covariance matrix model (GEN_BE v2.0)

    NASA Astrophysics Data System (ADS)

    Descombes, G.; Auligné, T.; Vandenberghe, F.; Barker, D. M.

    2014-07-01

    The specification of state background error statistics is a key component of data assimilation since it affects the impact observations will have on the analysis. In the variational data assimilation approach, applied in geophysical sciences, the dimensions of the background error covariance matrix (B) are usually too large to be explicitly determined and B needs to be modeled. Recent efforts to include new variables in the analysis such as cloud parameters and chemical species have required the development of the code to GENerate the Background Errors (GEN_BE) version 2.0 for the Weather Research and Forecasting (WRF) community model to allow for a simpler, flexible, robust, and community-oriented framework that gathers methods used by meteorological operational centers and researchers. We present the advantages of this new design for the data assimilation community by performing benchmarks and showing some of the new features on data assimilation test cases. As data assimilation for clouds remains a challenge, we present a multivariate approach that includes hydrometeors in the control variables and new correlated errors. In addition, the GEN_BE v2.0 code is employed to diagnose error parameter statistics for chemical species, which shows that it is a tool flexible enough to involve new control variables. While the generation of the background errors statistics code has been first developed for atmospheric research, the new version (GEN_BE v2.0) can be easily extended to other domains of science and be chosen as a testbed for diagnostic and new modeling of B. Initially developed for variational data assimilation, the model of the B matrix may be useful for variational ensemble hybrid methods as well.

  4. Generalized background error covariance matrix model (GEN_BE v2.0)

    NASA Astrophysics Data System (ADS)

    Descombes, G.; Auligné, T.; Vandenberghe, F.; Barker, D. M.; Barré, J.

    2015-03-01

    The specification of state background error statistics is a key component of data assimilation since it affects the impact observations will have on the analysis. In the variational data assimilation approach, applied in geophysical sciences, the dimensions of the background error covariance matrix (B) are usually too large to be explicitly determined and B needs to be modeled. Recent efforts to include new variables in the analysis such as cloud parameters and chemical species have required the development of the code to GENerate the Background Errors (GEN_BE) version 2.0 for the Weather Research and Forecasting (WRF) community model. GEN_BE allows for a simpler, flexible, robust, and community-oriented framework that gathers methods used by some meteorological operational centers and researchers. We present the advantages of this new design for the data assimilation community by performing benchmarks of different modeling of B and showing some of the new features in data assimilation test cases. As data assimilation for clouds remains a challenge, we present a multivariate approach that includes hydrometeors in the control variables and new correlated errors. In addition, the GEN_BE v2.0 code is employed to diagnose error parameter statistics for chemical species, which shows that it is a tool flexible enough to implement new control variables. While the generation of the background errors statistics code was first developed for atmospheric research, the new version (GEN_BE v2.0) can be easily applied to other domains of science and chosen to diagnose and model B. Initially developed for variational data assimilation, the model of the B matrix may be useful for variational ensemble hybrid methods as well.

  5. A FALSE POSITIVE FOR OCEAN GLINT ON EXOPLANETS: THE LATITUDE-ALBEDO EFFECT

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cowan, Nicolas B.; Abbot, Dorian S.; Voigt, Aiko

    2012-06-10

    Identifying liquid water on the surface of planets is a high priority, as this traditionally defines habitability. One proposed signature of oceans is specular reflection ('glint'), which increases the apparent albedo of a planet at crescent phases. We post-process a global climate model of an Earth-like planet to simulate reflected light curves. Significantly, we obtain glint-like phase variations even though we do not include specular reflection in our model. This false positive is the product of two generic properties: (1) for modest obliquities, a planet's poles receive less orbit-averaged stellar flux than its equator, so the poles are more likelymore » to be covered in highly reflective snow and ice; and (2) we show that reflected light from a modest-obliquity planet at crescent phases probes higher latitudes than at gibbous phases, therefore a planet's apparent albedo will naturally increase at crescent phase. We suggest that this 'latitude-albedo effect' will operate even for large obliquities: in that case the equator receives less orbit-averaged flux than the poles, and the equator is preferentially sampled at crescent phase. Using rotational and orbital color variations to map the surfaces of directly imaged planets and estimate their obliquity will therefore be a necessary pre-condition for properly interpreting their reflected phase variations. The latitude-albedo effect is a particularly convincing glint false positive for zero-obliquity planets, and such worlds are not amenable to latitudinal mapping. This effect severely limits the utility of specular reflection for detecting oceans on exoplanets.« less

  6. Poster — Thur Eve — 66: Robustness Assessment of a Novel IMRT Planning Method for Lung Radiotherapy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ahanj, M.; Bissonnette, J.-P.; Heath, E.

    2014-08-15

    Conventional radiotherapy treatment planning for lung cancer accounts for tumour motion by increasing the beam apertures. We recently developed an IMRT planning strategy which uses reduced beam apertures in combination with an edge enhancing boost of 110% of the prescription dose to the volume that corresponds to the portion of the CTV that moves outside of the reduced beam. Previous results showed that this approach ensures target coverage while reducing lung dose. In the current study, we evaluate the robustness of this boost volume approach to changes in respiratory motion, including amplitude and phase weight variations. ITV and boost volumemore » plans were generated for 5 NSCLC patients with respiratory motion amplitudes ranging from 1 to 2 cm. A standard 5mm PTV margin was used for all plans. The ORBIT treatment planning tool was used to plan and accumulate dose over 10 respiratory phases defined by the 4DCT datasets. For the phase weight variation study, dose was accumulated for three scenarios: equally-weighted-phases, higher weight assigned to exhale phases and higher weight assigned to inhale phases. For the amplitude variation study, a numerical phantom was used to generate 4DCT datasets corresponding to 7 mm, 10 mm and 14 mm motion amplitudes. Preliminary results found that delivered plans for all phase weight scenarios were clinically acceptable. When normalized to mean lung dose, the boost volume plan delivered 5% more dose to the CTV which indicates the potential for dose escalation using this approach.« less

  7. Effect of feeding treatment during the backgrounding phase of beef production from pasture on: II. Longissimus muscle proximate composition, cholesterol and fatty acids.

    PubMed

    Pordomingo, A J; García, T P; Volpi Lagreca, G

    2012-04-01

    This study evaluated effects of feedlot backgrounding strategies (40, 70 or 100% alfalfa hay diets) or pasture grazing on moisture, protein, total lipids, ash, cholesterol concentration, and lipid profiles of the longissimus dorsi muscle (LM) of pasture finished Angus heifers. Ninety six calves were allocated to the strategies over a 114-day period, followed by pasture grazing over 132 days. At the end of the backgrounding stage, the concentration of omega-3 (n-3) fatty acids was highest in the Pasture group and this difference persisted (P<0.032) until the end of the 132 day pasture finishing phase. Similarly, the n-6/n-3 ratio was lowest in the Pasture group at the end of backgrounding and after pasture finishing. Backgrounding diets based on 70 and 100% hay or pasture grazing showed greater (P<0.041) conjugated linoleic acid (CLA) concentration in the lipid fraction than 40% hay. Results suggested that residual effects of backgrounding strategies could be detected in intramuscular fat of pasture finished heifers. Copyright © 2011 Elsevier Ltd. All rights reserved.

  8. Significance of groundwater flux on contaminant concentration and mass discharge in the nonaqueous phase liquid (NAPL) contaminated zone.

    PubMed

    Zhu, Jianting; Sun, Dongmin

    2016-09-01

    Groundwater flowing through residual nonaqueous phase liquid (NAPL) source zone will cause NAPL dissolution and generate large contaminant plume. The use of contaminant mass discharge (CMD) measurements in addition to NAPL aqueous phase concentration to characterize site conditions and assess remediation performance is becoming popular. In this study, we developed new and generic numerical models to investigate the significance of groundwater flux temporal variations on the NAPL source dynamics. The developed models can accommodate any temporal variations of groundwater flux in the source zone. We examined the various features of groundwater flux using a few selected functional forms of linear increase/decrease, gradual smooth increase/decrease, and periodic fluctuations with a general trend. Groundwater flux temporal variations have more pronounced effects on the contaminant mass discharge dynamics than the aqueous concentration. If the groundwater flux initially increases, then the reduction in contaminant mass discharge (CMDR) vs. NAPL mass reduction (MR) relationship is mainly downward concave. If the groundwater flux initially decreases, then CMDR vs. MR relationship is mainly upward convex. If the groundwater flux variations are periodic, the CMDR vs. MR relationship tends to also have periodic variations ranging from upward convex to downward concave. Eventually, however, the CMDR vs. MR relationship approaches 1:1 when majority of the NAPL mass becomes depleted. Copyright © 2016 Elsevier B.V. All rights reserved.

  9. Does vapor pressure deficit drive the seasonality of δ 13 C of the net land-atmosphere CO 2 exchange across the United States?: The Influence of VPD on δ 13 C of NEE

    DOE PAGES

    Raczka, B.; Biraud, S. C.; Ehleringer, J. R.; ...

    2017-08-10

    The seasonal pattern of the carbon isotope content (δ 13C) of atmospheric CO 2 depends on local and nonlocal land-atmosphere exchange and atmospheric transport. Previous studies suggested that the δ13C of the net land-atmosphere CO 2 flux (δsource) varies seasonally as stomatal conductance of plants responds to vapor pressure deficit of air (VPD). We studied the variation of δ source at seven sites across the United States representing forests, grasslands, and an urban center. Using a two-part mixing model, we calculated the seasonal δsource for each site after removing background influence and, when possible, removing δ 13C variation of nonlocalmore » sources. Compared to previous analyses, we found a reduced seasonal (March–September) variation in δ source at the forest sites (0.5‰variation). We did not find a consistent seasonal relationship between VPD and δ source across forest (or other) sites, providing evidence that stomatal response to VPD was not the cause of the global, coherent seasonal pattern in δsource. In contrast to the forest sites, grassland and urban sites had a larger seasonal variation in δ source (5‰) dominated by seasonal transitions in C 3/C 4 grass productivity and in fossil fuel emissions, respectively. Our findings were sensitive to the location used to account for atmospheric background variation within the mixing model method that determined δsource. Special consideration should be given to background location depending on whether the intent is to understand site level dynamics or regional scale impacts of land-atmosphere exchange. The seasonal amplitude in δ 13C of land-atmosphere CO 2 exchange (δ source) varied across land cover types and was not driven by seasonal changes in vapor pressure deficit. The largest seasonal amplitudes of δsource were at grassland and urban sites, driven by changes in C 3/C 4 grass productivity and fossil fuel emissions, respectively. Mixing model approaches may incorrectly calculate δs ource when background atmospheric observations are remote and/or prone to anthropogenic influence.« less

  10. Does vapor pressure deficit drive the seasonality of δ 13 C of the net land-atmosphere CO 2 exchange across the United States?: The Influence of VPD on δ 13 C of NEE

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Raczka, B.; Biraud, S. C.; Ehleringer, J. R.

    The seasonal pattern of the carbon isotope content (δ 13C) of atmospheric CO 2 depends on local and nonlocal land-atmosphere exchange and atmospheric transport. Previous studies suggested that the δ13C of the net land-atmosphere CO 2 flux (δsource) varies seasonally as stomatal conductance of plants responds to vapor pressure deficit of air (VPD). We studied the variation of δ source at seven sites across the United States representing forests, grasslands, and an urban center. Using a two-part mixing model, we calculated the seasonal δsource for each site after removing background influence and, when possible, removing δ 13C variation of nonlocalmore » sources. Compared to previous analyses, we found a reduced seasonal (March–September) variation in δ source at the forest sites (0.5‰variation). We did not find a consistent seasonal relationship between VPD and δ source across forest (or other) sites, providing evidence that stomatal response to VPD was not the cause of the global, coherent seasonal pattern in δsource. In contrast to the forest sites, grassland and urban sites had a larger seasonal variation in δ source (5‰) dominated by seasonal transitions in C 3/C 4 grass productivity and in fossil fuel emissions, respectively. Our findings were sensitive to the location used to account for atmospheric background variation within the mixing model method that determined δsource. Special consideration should be given to background location depending on whether the intent is to understand site level dynamics or regional scale impacts of land-atmosphere exchange. The seasonal amplitude in δ 13C of land-atmosphere CO 2 exchange (δ source) varied across land cover types and was not driven by seasonal changes in vapor pressure deficit. The largest seasonal amplitudes of δsource were at grassland and urban sites, driven by changes in C 3/C 4 grass productivity and fossil fuel emissions, respectively. Mixing model approaches may incorrectly calculate δs ource when background atmospheric observations are remote and/or prone to anthropogenic influence.« less

  11. Multi Frequency Phase Fluorimetry (MFPF) for Oxygen Partial Pressure Measurement: Ex Vivo Validation by Polarographic Clark-Type Electrode

    PubMed Central

    Boehme, Stefan; Duenges, Bastian; Klein, Klaus U.; Hartwich, Volker; Mayr, Beate; Consiglio, Jolanda; Baumgardner, James E.; Markstaller, Klaus; Basciani, Reto; Vogt, Andreas

    2013-01-01

    Background Measurement of partial pressure of oxygen (PO2) at high temporal resolution remains a technological challenge. This study introduces a novel PO2 sensing technology based on Multi-Frequency Phase Fluorimetry (MFPF). The aim was to validate MFPF against polarographic Clark-type electrode (CTE) PO2 measurements. Methodology/Principal Findings MFPF technology was first investigated in N = 8 anaesthetised pigs at FIO2 of 0.21, 0.4, 0.6, 0.8 and 1.0. At each FIO2 level, blood samples were withdrawn and PO2 was measured in vitro with MFPF using two FOXY-AL300 probes immediately followed by CTE measurement. Secondly, MFPF-PO2 readings were compared to CTE in an artificial circulatory setup (human packed red blood cells, haematocrit of 30%). The impacts of temperature (20, 30, 40°C) and blood flow (0.8, 1.6, 2.4, 3.2, 4.0 L min−1) on MFPF-PO2 measurements were assessed. MFPF response time in the gas- and blood-phase was determined. Porcine MFPF-PO2 ranged from 63 to 749 mmHg; the corresponding CTE samples from 43 to 712 mmHg. Linear regression: CTE = 15.59+1.18*MFPF (R2 = 0.93; P<0.0001). Bland Altman analysis: meandiff 69.2 mmHg, rangediff -50.1/215.6 mmHg, 1.96-SD limits -56.3/194.8 mmHg. In artificial circulatory setup, MFPF-PO2 ranged from 20 to 567 mmHg and CTE samples from 11 to 575 mmHg. Linear regression: CTE = −8.73+1.05*MFPF (R2 = 0.99; P<0.0001). Bland-Altman analysis: meandiff 6.6 mmHg, rangediff -9.7/20.5 mmHg, 1.96-SD limits -12.7/25.8 mmHg. Differences between MFPF and CTE-PO2 due to variations of temperature were less than 6 mmHg (range 0–140 mmHg) and less than 35 mmHg (range 140–750 mmHg); differences due to variations in blood flow were less than 15 mmHg (all P-values>0.05). MFPF response-time (monoexponential) was 1.48±0.26 s for the gas-phase and 1.51±0.20 s for the blood-phase. Conclusions/Significance MFPF-derived PO2 readings were reproducible and showed excellent correlation and good agreement with Clark-type electrode-based PO2 measurements. There was no relevant impact of temperature and blood flow upon MFPF-PO2 measurements. The response time of the MFPF FOXY-AL300 probe was adequate for real-time sensing in the blood phase. PMID:23565259

  12. Heritable determinants of male fertilization success in the nematode Caenorhabditis elegans

    PubMed Central

    2011-01-01

    Background Sperm competition is a driving force in the evolution of male sperm characteristics in many species. In the nematode Caenorhabditis elegans, larger male sperm evolve under experimentally increased sperm competition and larger male sperm outcompete smaller hermaphrodite sperm for fertilization within the hermaphrodite reproductive tract. To further elucidate the relative importance of sperm-related traits that contribute to differential reproductive success among males, we quantified within- and among-strain variation in sperm traits (size, rate of production, number transferred, competitive ability) for seven male genetic backgrounds known previously to differ with respect to some sperm traits. We also quantified male mating ability in assays for rates of courtship and successful copulation, and then assessed the roles of these pre- and post-mating traits in first- and second-male fertilization success. Results We document significant variation in courtship ability, mating ability, sperm size and sperm production rate. Sperm size and production rate were strong indicators of early fertilization success for males that mated second, but male genetic backgrounds conferring faster sperm production make smaller sperm, despite virgin males of all genetic backgrounds transferring indistinguishable numbers of sperm to mating partners. Conclusions We have demonstrated that sperm size and the rate of sperm production represent dominant factors in determining male fertilization success and that C. elegans harbors substantial heritable variation for traits contributing to male reproductive success. C. elegans provides a powerful, tractable system for studying sexual selection and for dissecting the genetic basis and evolution of reproduction-related traits. PMID:21492473

  13. Credit WCT. Photographic copy of photograph, view looking south down ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Credit WCT. Photographic copy of photograph, view looking south down easternmost tunnel axis during second phase of JPL tunnel construction in 1959. Reinforced concrete formwork for Test Stand "D" foundation appears in left foreground. Formwork for Building 4222/E-23 (Test Stand "D" Workshop) is in place in right foreground with disturbed earth for western leg of tunnel system evident in background. Test Stand "C" is in center background, where first phase of tunnel construction ended. Test Stand "A" appears as tower in right background. (JPL negative no. 384-1838-C, 9 March 1959) - Jet Propulsion Laboratory Edwards Facility, Test Stand D, Edwards Air Force Base, Boron, Kern County, CA

  14. Phase-field modelling of ductile fracture: a variational gradient-extended plasticity-damage theory and its micromorphic regularization.

    PubMed

    Miehe, C; Teichtmeister, S; Aldakheel, F

    2016-04-28

    This work outlines a novel variational-based theory for the phase-field modelling of ductile fracture in elastic-plastic solids undergoing large strains. The phase-field approach regularizes sharp crack surfaces within a pure continuum setting by a specific gradient damage modelling. It is linked to a formulation of gradient plasticity at finite strains. The framework includes two independent length scales which regularize both the plastic response as well as the crack discontinuities. This ensures that the damage zones of ductile fracture are inside of plastic zones, and guarantees on the computational side a mesh objectivity in post-critical ranges. © 2016 The Author(s).

  15. Time-dependent variational approach in terms of squeezed coherent states: Implication to semi-classical approximation

    NASA Technical Reports Server (NTRS)

    Tsue, Yasuhiko

    1994-01-01

    A general framework for time-dependent variational approach in terms of squeezed coherent states is constructed with the aim of describing quantal systems by means of classical mechanics including higher order quantal effects with the aid of canonicity conditions developed in the time-dependent Hartree-Fock theory. The Maslov phase occurring in a semi-classical quantization rule is investigated in this framework. In the limit of a semi-classical approximation in this approach, it is definitely shown that the Maslov phase has a geometric nature analogous to the Berry phase. It is also indicated that this squeezed coherent state approach is a possible way to go beyond the usual WKB approximation.

  16. Longitudinal Variations of Low-Latitude Ionospheric Irregularities during the 2015 St. Patrick's Day Storm

    NASA Astrophysics Data System (ADS)

    Pi, X.; Vergados, P.

    2017-12-01

    GPS data from more than 2000 globally distributed ground-based stations are processed to generate Global Map of Ionospheric Irregularities and Scintillation (GMIIS) at 5-minite cadence for the 2015 St. Patrick's Day Storm. The time sequence of GMIIS provides global snapshots of evolving ionospheric irregularities that are helpful in investigations of small-scale ionospheric perturbations globally. Such data from selected stations at longitudes distributed around the globe are also analyzed to investigate longitudinal variations of low-latitude ionospheric irregularities (LLII) during the storm. Prior to the storm day, The GPS data show typical seasonal (March equinox) activities of LLII during evening hours in different longitude regions, i.e., active in American through Asian longitudes but relatively inactive in the Pacific sector. The data also reveal dramatic changes in LLII during the storm main phase (17 March 2015) and recovery phase (18-19 March 2015). While remaining inactive in the Pacific region, LLII have gone through complicated variations in the longitude regions of high scintillation season. The variations include active, weakened or suppressed, or post-midnight triggering during the storm main phase and recovery phase depending on specific longitude. To understand possible responsible causes of these variations in different longitudes, the Global Assimilative Ionospheric Model (GAIM) is used to reproduce ambient ionospheric state and its disturbances. For this storm study, GAIM assimilates GPS data from about 650 globally distributed stations and from spaceborne receivers onboard the COSMIC satellites. The global assimilative modeling enables us to investigate the changes of the equatorial ionospheric anomaly (EIA) and corresponding ionospheric dynamical processes in the concerned longitudes. This presentation will combine pictures of small- and large-scale ionospheric perturbations and attempt to obtain insight into mechanisms that drive LLII changes during the major storm.

  17. Phase Holograms In PMMA

    NASA Technical Reports Server (NTRS)

    Maker, Paul D.; Muller, Richard E.

    1994-01-01

    Complex, computer-generated phase holograms written in thin films of poly(methyl methacrylate) (PMMA) by process of electron-beam exposure followed by chemical development. Spatial variations of phase delay in holograms quasi-continuous, as distinquished from stepwise as in binary phase holograms made by integrated-circuit fabrication. Holograms more precise than binary holograms. Greater continuity and precision results in decreased scattering loss and increased imaging efficiency.

  18. Phase diagram of electron systems near the superconductor-insulator transition.

    PubMed

    Pokrovsky, V L; Falco, G M; Nattermann, T

    2010-12-31

    The zero temperature phase diagram of Cooper pairs exposed to disorder and a magnetic field is determined theoretically from a variational approach. Four distinct phases are found: a Bose and a Fermi insulating, a metallic, and a superconducting phase, respectively. The results explain the giant negative magnetoresistance found experimentally in In-O, TiN, Be and high-T(c) materials.

  19. Temporal Variation of the Rotation of the Solar Mean Magnetic Field

    NASA Astrophysics Data System (ADS)

    Xie, J. L.; Shi, X. J.; Xu, J. C.

    2017-04-01

    Based on continuous wavelet transformation analysis, the daily solar mean magnetic field (SMMF) from 1975 May 16 to 2014 July 31 is analyzed to reveal its rotational behavior. Both the recurrent plot in Bartels form and the continuous wavelet transformation analysis show the existence of rotational modulation in the variation of the daily SMMF. The dependence of the rotational cycle lengths on solar cycle phase is also studied, which indicates that the yearly mean rotational cycle lengths generally seem to be longer during the rising phase of solar cycles and shorter during the declining phase. The mean rotational cycle length for the rising phase of all of the solar cycles in the considered time is 28.28 ± 0.67 days, while for the declining phase it is 27.32 ± 0.64 days. The difference of the mean rotational cycle lengths between the rising phase and the declining phase is 0.96 days. The periodicity analysis, through the use of an auto-correlation function, indicates that the rotational cycle lengths have a significant period of about 10.1 years. Furthermore, the cross-correlation analysis indicates that there exists a phase difference between the rotational cycle lengths and solar activity.

  20. Non-associativity in non-geometric string and M-theory backgrounds, the algebra of octonions, and missing momentum modes

    DOE PAGES

    Günaydin, Murat; Lüst, Dieter; Malek, Emanuel

    2016-11-07

    We propose a non-associative phase space algebra for M-theory backgrounds with locally non-geometric fluxes based on the non-associative algebra of octonions. Our proposal is based on the observation that the non-associative algebra of the non-geometric R-flux background in string theory can be obtained by a proper contraction of the simple Malcev algebra generated by imaginary octonions. Furthermore, by studying a toy model of a four-dimensional locally non-geometric M-theory background which is dual to a twisted torus, we show that the non-geometric background is “missing” a momentum mode. The resulting seven-dimensional phase space can thus be naturally identified with the imaginarymore » octonions. This allows us to interpret the full uncontracted algebra of imaginary octonions as the uplift of the string theory R-flux algebra to M-theory, with the contraction parameter playing the role of the string coupling constant g s.« less

  1. Non-associativity in non-geometric string and M-theory backgrounds, the algebra of octonions, and missing momentum modes

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Günaydin, Murat; Lüst, Dieter; Malek, Emanuel

    We propose a non-associative phase space algebra for M-theory backgrounds with locally non-geometric fluxes based on the non-associative algebra of octonions. Our proposal is based on the observation that the non-associative algebra of the non-geometric R-flux background in string theory can be obtained by a proper contraction of the simple Malcev algebra generated by imaginary octonions. Furthermore, by studying a toy model of a four-dimensional locally non-geometric M-theory background which is dual to a twisted torus, we show that the non-geometric background is “missing” a momentum mode. The resulting seven-dimensional phase space can thus be naturally identified with the imaginarymore » octonions. This allows us to interpret the full uncontracted algebra of imaginary octonions as the uplift of the string theory R-flux algebra to M-theory, with the contraction parameter playing the role of the string coupling constant g s.« less

  2. Neutral line chaos and phase space structure

    NASA Technical Reports Server (NTRS)

    Burkhart, Grant R.; Speiser, Theodore W.; Martin, Richard F., Jr.; Dusenbery, Paul B.

    1991-01-01

    Phase space structure and chaos near a neutral line are studied with numerical surface-of-section (SOS) techniques and analytic methods. Results are presented for a linear neutral line model with zero crosstail electric field. It was found that particle motion can be divided into three regimes dependening on the value of the conserved canonical momentum, Py, and the conserved Hamiltonian, h. The phase space structure, using Poincare SOS plots, is highly sensitive to bn = Bn/B0 variations, but not to h variations. It is verified that the slow motion preserves the action, Jz, as evaluated by Sonnerup (1971), when the period of the fast motion is smaller than the time scale of the slow motion. Results show that the phase space structure and particle chaos depend sensitively upon Py and bn, but are independent of h.

  3. Indirect Phase Height Measurements in Central and Eastern Europe for Monitoring D Region Plasma

    NASA Technical Reports Server (NTRS)

    Cossart, G. V.; Pakhomov, S. V.

    1984-01-01

    Low-frequency propagation experiments for the investigation of the lower part of the ionospheric D region were at first used by BRACEWELL et al. (1951) in the early fifties. Among these was the method of indirect phase height measurements for continuous monitoring of the lower ionosphere. It is based upon field strength measurements of commercial radio transmitters in the frequency range between 50 and 200 kHz at distances from 500 to 1500 km. The field strength records show characteristic diurnal variations with maxima and minima, produced by interference between the ground wave and the ionospherically reflected sky wave, the phase difference between varies in correspondence to the diurnal variation of the reflection height. In order to check the validity of interpretations of indirect phase height data, comparisons were made with simultaneous rocket soundings. Results are summarized.

  4. Holographic Interferometry--A Laboratory Experiment.

    ERIC Educational Resources Information Center

    de Frutos, A. M.; de la Rosa, M. I.

    1988-01-01

    Explains the problem of analyzing a phase object, separating the contribution due to thickness variations and that due to refractive index variations. Discusses the design of an interferometer and some applications. Provides diagrams and pictures of holographic images. (YP)

  5. Laboratory meter-scale seismic monitoring of varying water levels in granular media

    NASA Astrophysics Data System (ADS)

    Pasquet, S.; Bodet, L.; Bergamo, P.; Guérin, R.; Martin, R.; Mourgues, R.; Tournat, V.

    2016-12-01

    Laboratory physical modelling and non-contacting ultrasonic techniques are frequently proposed to tackle theoretical and methodological issues related to geophysical prospecting. Following recent developments illustrating the ability of seismic methods to image spatial and/or temporal variations of water content in the vadose zone, we developed laboratory experiments aimed at testing the sensitivity of seismic measurements (i.e., pressure-wave travel times and surface-wave phase velocities) to water saturation variations. Ultrasonic techniques were used to simulate typical seismic acquisitions on small-scale controlled granular media presenting different water levels. Travel times and phase velocity measurements obtained at the dry state were validated with both theoretical models and numerical simulations and serve as reference datasets. The increasing water level clearly affects the recorded wave field in both its phase and amplitude, but the collected data cannot yet be inverted in the absence of a comprehensive theoretical model for such partially saturated and unconsolidated granular media. The differences in travel time and phase velocity observed between the dry and wet models show patterns that are interestingly coincident with the observed water level and depth of the capillary fringe, thus offering attractive perspectives for studying soil water content variations in the field.

  6. Measurement method for determining the magnetic hysteresis effects of reluctance actuators by evaluation of the force and flux variation.

    PubMed

    Vrijsen, N H; Jansen, J W; Compter, J C; Lomonova, E A

    2013-07-01

    A measurement method is presented which identifies the magnetic hysteresis effects present in the force of linear reluctance actuators. The measurement method is applied to determine the magnetic hysteresis in the force of an E-core reluctance actuator, with and without pre-biasing permanent magnet. The force measurements are conducted with a piezoelectric load cell (Kistler type 9272). This high-bandwidth force measurement instrument is identified in the frequency domain using a voice-coil actuator that has negligible magnetic hysteresis and eddy currents. Specifically, the phase delay between the current and force of the voice-coil actuator is used for the calibration of the measurement instrument. This phase delay is also obtained by evaluation of the measured force and flux variation in the E-core actuator, both with and without permanent magnet on the middle tooth. The measured magnetic flux variation is used to distinguish the phase delay due to magnetic hysteresis from the measured phase delay between the current and the force of the E-core actuator. Finally, an open loop steady-state ac model is presented that predicts the magnetic hysteresis effects in the force of the E-core actuator.

  7. GPS and GLONASS 1 Hz phase rate observations to study high latitudes ionospheric irregularities

    NASA Astrophysics Data System (ADS)

    Ghoddousi-Fard, R.; Prikryl, P.; Jacobsen, K. S.; Lahaye, F.

    2016-12-01

    It has been shown that dual frequency 1 Hz GPS phase rate observations can serve as a promising proxy for phase scintillation over high latitudes (see e.g. Ghoddousi-Fard et al., 2013, 2015). However signals from other GNSS constellations including GLONASS have been available and widely used for positioning applications. Usage of additional GNSS constellations should allow improved sampling of the ionosphere, a critical advantage to study small scale ionospheric irregularities over high latitudes. Migration of global GPS networks to multi-GNSS are now underway such as International GNSS Service (IGS) Multi-GNSS Experiment (MGEX) and other national, public and private sector networks. In this presentation, GPS and GLONASS observations from high latitude MGEX stations as well as a dense regional network over Norway are used to map high latitude ionospheric irregularities by means of standard deviation of phase rate variations. Occurrence of GPS phase irregularities as a function of magnetic latitude and local time are compared with those from both GPS and GLONASS. By including 1 Hz GLONASS measurements at about 185 stations over Norway during geomagnetic storm of March 17-18, 2015, this study complements a recently submitted paper that examined the GPS phase scintillation occurrence in the context of solar wind coupling to the magnetosphere-ionosphere system and auroral electrojet currents (Prikryl et al., 2016). Ghoddousi-Fard et al. (2013). GPS phase difference variation statistics: A comparison between phase scintillation index and proxy indices. Adv. Space Res., 52, 1397-1405, doi: 10.1016/j.asr.2013.06.035. Ghoddousi-Fard et al. (2015). Analysis of GPS phase rate variations in response to geomagnetic field perturbations over the Canadian auroral region. Adv. Space Res., 55, 1372-1381, doi: 10.1016/j.asr.2014.12.021. Prikryl et al. (2016). GPS phase scintillation at high latitudes during the geomagnetic storm of March 17-18, 2015, submitted to J. Geophys. Res. ESS contribution number: 20160112

  8. Algorithmic-Reducibility = Renormalization-Group Fixed-Points; ``Noise''-Induced Phase-Transitions (NITs) to Accelerate Algorithmics (``NIT-Picking'') Replacing CRUTCHES!!!: Gauss Modular/Clock-Arithmetic Congruences = Signal X Noise PRODUCTS..

    NASA Astrophysics Data System (ADS)

    Siegel, J.; Siegel, Edward Carl-Ludwig

    2011-03-01

    Cook-Levin computational-"complexity"(C-C) algorithmic-equivalence reduction-theorem reducibility equivalence to renormalization-(semi)-group phase-transitions critical-phenomena statistical-physics universality-classes fixed-points, is exploited with Gauss modular/clock-arithmetic/model congruences = signal X noise PRODUCT reinterpretation. Siegel-Baez FUZZYICS=CATEGORYICS(SON of ``TRIZ''): Category-Semantics(C-S) tabular list-format truth-table matrix analytics predicts and implements "noise"-induced phase-transitions (NITs) to accelerate versus to decelerate Harel [Algorithmics(1987)]-Sipser[Intro. Theory Computation(1997) algorithmic C-C: "NIT-picking" to optimize optimization-problems optimally(OOPO). Versus iso-"noise" power-spectrum quantitative-only amplitude/magnitude-only variation stochastic-resonance, this "NIT-picking" is "noise" power-spectrum QUALitative-type variation via quantitative critical-exponents variation. Computer-"science" algorithmic C-C models: Turing-machine, finite-state-models/automata, are identified as early-days once-workable but NOW ONLY LIMITING CRUTCHES IMPEDING latter-days new-insights!!!

  9. Mapping and phasing of structural variation in patient genomes using nanopore sequencing.

    PubMed

    Cretu Stancu, Mircea; van Roosmalen, Markus J; Renkens, Ivo; Nieboer, Marleen M; Middelkamp, Sjors; de Ligt, Joep; Pregno, Giulia; Giachino, Daniela; Mandrile, Giorgia; Espejo Valle-Inclan, Jose; Korzelius, Jerome; de Bruijn, Ewart; Cuppen, Edwin; Talkowski, Michael E; Marschall, Tobias; de Ridder, Jeroen; Kloosterman, Wigard P

    2017-11-06

    Despite improvements in genomics technology, the detection of structural variants (SVs) from short-read sequencing still poses challenges, particularly for complex variation. Here we analyse the genomes of two patients with congenital abnormalities using the MinION nanopore sequencer and a novel computational pipeline-NanoSV. We demonstrate that nanopore long reads are superior to short reads with regard to detection of de novo chromothripsis rearrangements. The long reads also enable efficient phasing of genetic variations, which we leveraged to determine the parental origin of all de novo chromothripsis breakpoints and to resolve the structure of these complex rearrangements. Additionally, genome-wide surveillance of inherited SVs reveals novel variants, missed in short-read data sets, a large proportion of which are retrotransposon insertions. We provide a first exploration of patient genome sequencing with a nanopore sequencer and demonstrate the value of long-read sequencing in mapping and phasing of SVs for both clinical and research applications.

  10. Phase diagram of a symmetric electron–hole bilayer system: a variational Monte Carlo study

    NASA Astrophysics Data System (ADS)

    Sharma, Rajesh O.; Saini, L. K.; Prasad Bahuguna, Bhagwati

    2018-05-01

    We study the phase diagram of a symmetric electron–hole bilayer system at absolute zero temperature and in zero magnetic field within the quantum Monte Carlo approach. In particular, we conduct variational Monte Carlo simulations for various phases, i.e. the paramagnetic fluid phase, the ferromagnetic fluid phase, the anti-ferromagnetic Wigner crystal phase, the ferromagnetic Wigner crystal phase and the excitonic phase, to estimate the ground-state energy at different values of in-layer density and inter-layer spacing. Slater–Jastrow style trial wave functions, with single-particle orbitals appropriate for different phases, are used to construct the phase diagram in the (r s , d) plane by finding the relative stability of trial wave functions. At very small layer separations, we find that the fluid phases are stable, with the paramagnetic fluid phase being particularly stable at and the ferromagnetic fluid phase being particularly stable at . As the layer spacing increases, we first find that there is a phase transition from the ferromagnetic fluid phase to the ferromagnetic Wigner crystal phase when d reaches 0.4 a.u. at r s   =  20, and before there is a return to the ferromagnetic fluid phase when d approaches 1 a.u. However, for r s   <  20 and a.u., the excitonic phase is found to be stable. We do not find that the anti-ferromagnetic Wigner crystal is stable over the considered range of r s and d. We also find that as r s increases, the critical layer separations for Wigner crystallization increase.

  11. Temporal variation and source identification of black carbon at Lin'an and Longfengshan regional background stations in China

    NASA Astrophysics Data System (ADS)

    Cheng, Siyang; Wang, Yaqiang; An, Xingqin

    2017-12-01

    Black carbon (BC) is a component of fine particulate matter (PM2.5), associated with climate, weather, air quality, and people's health. However, studies on temporal variation of atmospheric BC concentration at background stations in China and its source area identification are lacking. In this paper, we use 2-yr BC observations from two background stations, Lin'an (LAN) and Longfengshan (LFS), to perform the investigation. The results show that the mean diurnal variation of BC has two significant peaks at LAN while different characteristics are found in the BC variation at LFS, which are probably caused by the difference in emission source contributions. Seasonal variation of monthly BC shows double peaks at LAN but a single peak at LFS. The annual mean concentrations of BC at LAN and LFS decrease by 1.63 and 0.26 μg m-3 from 2009 to 2010, respectively. The annual background concentration of BC at LAN is twice higher than that at LFS. The major source of the LAN BC is industrial emission while the source of the LFS BC is residential emission. Based on transport climatology on a 7-day timescale, LAN and LFS stations are sensitive to surface emissions respectively in belt or approximately circular area, which are dominated by summer monsoon or colder land air flows in Northwest China. In addition, we statistically analyze the BC source regions by using BC observation and FLEXible PARTicle dispersion model (FLEXPART) simulation. In summer, the source regions of BC are distributed in the northwest and south of LAN and the southwest of LFS. Low BC concentration is closely related to air mass from the sea. In winter, the source regions of BC are concentrated in the west and south of LAN and the northeast of the threshold area of s tot at LFS. The cold air mass in the northwest plays an important role in the purification of atmospheric BC. On a yearly scale, sources of BC are approximately from five provinces in the northwest/southeast of LAN and the west of LFS. These findings are helpful in reducing BC emission and controlling air pollution.

  12. Laser Studies of Gas Phase Radical Reactions.

    DTIC Science & Technology

    1989-01-01

    synchronised chopper ( Rofin 7500) to block the laser beam on alternate shots to allow background subtraction. Signal due to scattered laser light was...synchronised chopper ( Rofin 7500) to block the laser beam on alternate shots to allow background subtraction. Signal due to scattered laser light was...Cassufication) (U) Laser Studies of Gas Phase Radical Reactions 𔃼 ,ERSRP4AL UTHOR($) I3a. TYPE Of REPORT 13b. TIME COVERtD 14 D T8?’F JPORT (Year, Maonlth, Da

  13. Relative velocity change measurement based on seismic noise analysis in exploration geophysics

    NASA Astrophysics Data System (ADS)

    Corciulo, M.; Roux, P.; Campillo, M.; Dubuq, D.

    2011-12-01

    Passive monitoring techniques based on noise cross-correlation analysis are still debated in exploration geophysics even if recent studies showed impressive performance in seismology at larger scale. Time evolution of complex geological structure using noise data includes localization of noise sources and measurement of relative velocity variations. Monitoring relative velocity variations only requires the measurement of phase shifts of seismic noise cross-correlation functions computed for successive time recordings. The existing algorithms, such as the Stretching and the Doublet, classically need great efforts in terms of computation time, making them not practical when continuous dataset on dense arrays are acquired. We present here an innovative technique for passive monitoring based on the measure of the instantaneous phase of noise-correlated signals. The Instantaneous Phase Variation (IPV) technique aims at cumulating the advantages of the Stretching and Doublet methods while proposing a faster measurement of the relative velocity change. The IPV takes advantage of the Hilbert transform to compute in the time domain the phase difference between two noise correlation functions. The relative velocity variation is measured through the slope of the linear regression of the phase difference curve as a function of correlation time. The large amount of noise correlation functions, classically available at exploration scale on dense arrays, allows for a statistical analysis that further improves the precision of the estimation of the velocity change. In this work, numerical tests first aim at comparing the IPV performance to the Stretching and Doublet techniques in terms of accuracy, robustness and computation time. Then experimental results are presented using a seismic noise dataset with five days of continuous recording on 397 geophones spread on a ~1 km-squared area.

  14. Entorhinal stellate cells show preferred spike phase-locking to theta inputs that is enhanced by correlations in synaptic activity

    PubMed Central

    Fernandez, Fernando R.; Malerba, Paola; Bressloff, Paul C.; White, John A.

    2013-01-01

    In active networks, excitatory and inhibitory synaptic inputs generate membrane voltage fluctuations that drive spike activity in a probabilistic manner. Despite this, some cells in vivo show a strong propensity to precisely lock to the local field potential and maintain a specific spike-phase relationship relative to other cells. In recordings from rat medial entorhinal cortical stellate cells, we measured spike phase-locking in response to sinusoidal “test” inputs in the presence of different forms of background membrane voltage fluctuations, generated via dynamic clamp. We find that stellate cells show strong and robust spike phase-locking to theta (4–12 Hz) inputs. This response occurs under a wide variety of background membrane voltage fluctuation conditions that include a substantial increase in overall membrane conductance. Furthermore, the IH current present in stellate cells is critical to the enhanced spike phase-locking response at theta. Finally, we show that correlations between inhibitory and excitatory conductance fluctuations, which can arise through feed-back and feed-forward inhibition, can substantially enhance the spike phase-locking response. The enhancement in locking is a result of a selective reduction in the size of low frequency membrane voltage fluctuations due to cancelation of inhibitory and excitatory current fluctuations with correlations. Hence, our results demonstrate that stellate cells have a strong preference for spike phase-locking to theta band inputs and that the absolute magnitude of locking to theta can be modulated by the properties of background membrane voltage fluctuations. PMID:23554484

  15. Accelerator mass spectrometry analysis of background (14)C-concentrations in human blood: aiming at reference data for further microdosing studies.

    PubMed

    Minamimoto, Ryogo; Hamabe, Yoshimi; Miyaoka, Teiji; Hara, Takamitsu; Yoshida, Keisuke; Oka, Takashi; Inoue, Tomio

    2008-12-01

    Phase 0 clinical studies, which are known as microdose trials, are expected to promote drug development and reduce development costs. The accelerator mass spectrometry (AMS) system is expected to play an important role in the microdosing tests, as it is a highly sensitive measurement system that can be used to determine the drug concentrations in these tests. Using the AMS system, we measured the background (14)C-concentration in human blood and evaluated the data for use as a reference in microdose studies that administer (14)C-labeled compounds in humans. Blood samples of five healthy Japanese volunteers (three men, two women, median age 40.4 +/- 9.8 years) were collected around the same time and just prior to when the subjects ate a meal (between 12:00 noon and 2:00 pm). Centrifugal separations of blood that was allowed to clot and the plasma were performed at 503 g for 2 min at 4 degrees C. Background (14)C-concentration for each of the samples was measured using the AMS system. The Institute of Accelerator Analysis, which is the first contract research organization in Japan that is capable of providing AMS analysis services for carbon dating and bioanalysis work, performed the AMS analysis. The mean (14)C-concentration in blood was 1.613 +/- 0.125 dpm/ml (men 1.668 +/- 0.114 dpm/ml, women 1.514 +/- 0.076 dpm/ml), in clots 2.373 +/- 0.087 dpm/ml (men 2.381 +/- 0.101 dpm/ml, women 2.357 +/- 0.060 dpm/ ml), and in plasma 0.648 +/- 0.049 dpm/ml (men 0.647 +/- 0.059 dpm/ml, women 0.649 +/- 0.032 dpm/ml). The coefficient variation (CV) for blood was 7.8% (men 6.9%, women 5.0%), for clots 3.7% (men 4.3%, women 2.5%), and for plasma 7.6% (men 9.1%, women 4.9%). The (14)C-concentrations of the clot and blood were higher than those of plasma. The (14)C-concentrations in the blood and plasma were slightly different between individuals when compared with the values for the clot, although the differences were quite small, with a CV value less than 7.8%. Even though the (14)C-concentration differed only slightly between individuals, (14)C-concentrations of the clot and blood were higher than those of the plasma. Therefore, the variation and difference of the background data for blood and plasma might be of use as a reference for microdosing test evaluations.

  16. Solar rotational modulations of spectral irradiance and correlations with the variability of total solar irradiance

    NASA Astrophysics Data System (ADS)

    Lee, Jae N.; Cahalan, Robert F.; Wu, Dong L.

    2016-09-01

    Aims: We characterize the solar rotational modulations of spectral solar irradiance (SSI) and compare them with the corresponding changes of total solar irradiance (TSI). Solar rotational modulations of TSI and SSI at wavelengths between 120 and 1600 nm are identified over one hundred Carrington rotational cycles during 2003-2013. Methods: The SORCE (Solar Radiation and Climate Experiment) and TIMED (Thermosphere Ionosphere Mesosphere Energetics and Dynamics)/SEE (Solar EUV Experiment) measured and SATIRE-S modeled solar irradiances are analyzed using the EEMD (Ensemble Empirical Mode Decomposition) method to determine the phase and amplitude of 27-day solar rotational variation in TSI and SSI. Results: The mode decomposition clearly identifies 27-day solar rotational variations in SSI between 120 and 1600 nm, and there is a robust wavelength dependence in the phase of the rotational mode relative to that of TSI. The rotational modes of visible (VIS) and near infrared (NIR) are in phase with the mode of TSI, but the phase of the rotational mode of ultraviolet (UV) exhibits differences from that of TSI. While it is questionable that the VIS to NIR portion of the solar spectrum has yet been observed with sufficient accuracy and precision to determine the 11-year solar cycle variations, the temporal variations over one hundred cycles of 27-day solar rotation, independent of the two solar cycles in which they are embedded, show distinct solar rotational modulations at each wavelength.

  17. Solar Rotational Modulations of Spectral Irradiance and Correlations with the Variability of Total Solar Irradiance

    NASA Technical Reports Server (NTRS)

    Lee, Jae N.; Cahalan, Robert F.; Wu, Dong L.

    2016-01-01

    Aims: We characterize the solar rotational modulations of spectral solar irradiance (SSI) and compare them with the corresponding changes of total solar irradiance (TSI). Solar rotational modulations of TSI and SSI at wavelengths between 120 and 1600 nm are identified over one hundred Carrington rotational cycles during 2003-2013. Methods: The SORCE (Solar Radiation and Climate Experiment) and TIMED (Thermosphere Ionosphere Mesosphere Energetics and Dynamics)/SEE (Solar EUV Experiment) measured and SATIRE-S modeled solar irradiances are analyzed using the EEMD (Ensemble Empirical Mode Decomposition) method to determine the phase and amplitude of 27-day solar rotational variation in TSI and SSI. Results: The mode decomposition clearly identifies 27-day solar rotational variations in SSI between 120 and 1600 nm, and there is a robust wavelength dependence in the phase of the rotational mode relative to that of TSI. The rotational modes of visible (VIS) and near infrared (NIR) are in phase with the mode of TSI, but the phase of the rotational mode of ultraviolet (UV) exhibits differences from that of TSI. While it is questionable that the VIS to NIR portion of the solar spectrum has yet been observed with sufficient accuracy and precision to determine the 11-year solar cycle variations, the temporal variations over one hundred cycles of 27-day solar rotation, independent of the two solar cycles in which they are embedded, show distinct solar rotational modulations at each wavelength.

  18. Explaining variation in hospice visit intensity for routine home care.

    PubMed

    Stearns, Sally C; Sheingold, Steven; Zuckerman, Rachael B

    2014-01-01

    Medicare pays a flat per diem rate by level of hospice service without case-mix adjustment, although previous research shows that visit intensity varies considerably over the course of hospice episodes. Concerns pertain to the inherent financial incentives for routine home care, the most frequently used level, and whether payment efficiency can be improved using case-mix adjustment. The aim of this study was to assess variation in hospice visit intensity during hospice episodes by patient, hospice, and episode characteristics to inform policy discussions regarding hospice payment methods. This observational study used Medicare claims for hospice episodes in 2010. Multiple observations were constructed per episode phase (eg, days 1-14, 15-30, etc.). Episode phase and observed characteristics were regressed on average routine home care visit intensity per day; patient and hospice fixed effects controlled for unobserved characteristics. Visit intensity was constructed using national wages to weight visits by provider type. Observed patient characteristics included age, sex, race, diagnoses, venue of care, use of other hospice levels of care, and discharge status; hospice characteristics included ownership, affiliation, size, and urban/state location. Visit intensity varied substantially by episode phase. This pattern was largely invariant to observed patient and hospice characteristics, which explained <4% of variation in visit intensity per day after adjusting for episode phase. Unobserved patient characteristics explained approximately 85% of remaining variation. These results show that case-mix adjustment based on commonly observed factors would only minimally improve hospice payment methodology.

  19. Seasonal Variation of Ozone in the Tropical Lower Stratosphere: Southern Tropics are Different from Northern Tropics

    NASA Technical Reports Server (NTRS)

    Stolarski, Richard S.; Waugh, Darryn W.; Wang, Lei,; Oman, Luke D.; Douglass, Anne R.; Newman, Paul A.

    2014-01-01

    We examine the seasonal behavior of ozone by using measurements from various instruments including ozonesondes, Aura Microwave Limb Sounder, and Stratospheric Aerosol and Gas Experiment II. We find that the magnitude of the annual variation in ozone, as a percentage of the mean ozone, exhibits a maximum at or slightly above the tropical tropopause. The maximum is larger in the northern tropics than in the southern tropics, and the annual maximum of ozone in the southern tropics occurs 2 months later than that in the northern tropics, in contrast to usual assumption that the tropics can be treated as a horizontally homogeneous region. The seasonal cycles of ozone and other species in this part of the lower stratosphere result from a combination of the seasonal variation of the Brewer-Dobson circulation and the seasonal variation of tropical and midlatitude mixing. In the Northern Hemisphere, the impacts of upwelling and mixing between the tropics and midlatitudes on ozone are in phase and additive. In the Southern Hemisphere, they are not in phase. We apply a tropical leaky pipe model independently to each hemisphere to examine the relative roles of upwelling and mixing in the northern and southern tropical regions. Reasonable assumptions of the seasonal variation of upwelling and mixing yield a good description of the seasonal magnitude and phase in both the southern and northern tropics. The differences in the tracers and transport between the northern and southern tropical stratospheres suggest that the paradigm of well-mixed tropics needs to be revised to consider latitudinal variations within the tropics.

  20. Re-analysis of previous laboratory phase curves: 1. Variations of the opposition effect morphology with the textural properties, and an application to planetary surfaces

    NASA Astrophysics Data System (ADS)

    Déau, Estelle; Flandes, Alberto; Spilker, Linda J.; Petazzoni, Jérôme

    2013-11-01

    Typical variations in the opposition effect morphology of laboratory samples at optical wavelengths are investigated to probe the role of the textural properties of the surface (roughness, porosity and grain size). A previously published dataset of 34 laboratory phase curves is re-analyzed and fit with several morphological models. The retrieved morphological parameters that characterize the opposition surge, amplitude, width and slope (A, HWHM and S respectively) are correlated to the single scattering albedo, the roughness, the porosity and the grain size of the samples. To test the universality of the laboratory samples’ trends, we use previously published phase curves of planetary surfaces, including the Moon, satellites and rings of the giant planets. The morphological parameters of the surge (A and HWHM) for planetary surfaces are found to have a non-monotonic variation with the single scattering albedo, similar to that observed in asteroids (Belskaya, I.N., Shevchenko, V.G. [2000]. Icarus 147, 94-105), which is unexplained so far. The morphological parameters of the surge (A and HWHM) for laboratory samples seem to exhibit the same non-monotonic variation with single scattering albedo. While the non-monotonic variation with albedo was already observed by Nelson et al. (Nelson, R.M., Hapke, B.W., Smythe, W.D., Hale, A.S., Piatek, J.L. [2004]. Planetary regolith microstructure: An unexpected opposition effect result. In: Mackwell, S., Stansbery, E. (Eds.), Proc. Lunar Sci. Conf. 35, p. 1089), we report here the same variation for the angular width.

  1. Cryogenic x-ray diffraction microscopy utilizing high-pressure cryopreservation

    NASA Astrophysics Data System (ADS)

    Lima, Enju; Chushkin, Yuriy; van der Linden, Peter; Kim, Chae Un; Zontone, Federico; Carpentier, Philippe; Gruner, Sol M.; Pernot, Petra

    2014-10-01

    We present cryo x-ray diffraction microscopy of high-pressure-cryofixed bacteria and report high-convergence imaging with multiple image reconstructions. Hydrated D. radiodurans cells were cryofixed at 200 MPa pressure into ˜10-μm-thick water layers and their unstained, hydrated cellular environments were imaged by phasing diffraction patterns, reaching sub-30-nm resolutions with hard x-rays. Comparisons were made with conventional ambient-pressure-cryofixed samples, with respect to both coherent small-angle x-ray scattering and the image reconstruction. The results show a correlation between the level of background ice signal and phasing convergence, suggesting that phasing difficulties with frozen-hydrated specimens may be caused by high-background ice scattering.

  2. HST Multicolor (255-1042 nm) Photometry of Saturn's Main Rings. 1; Radial Profiles, Phase and Opening Angle Variations, and Regional Spectra

    NASA Technical Reports Server (NTRS)

    Cuzzi, Jeffrey N.; French, Richard G.; Dones, Luke; DeVincenzi, Donald (Technical Monitor)

    2001-01-01

    The main rings of Saturn were observed with the Planetary Camera of the WFPC2 instrument on the Hubble Space Telescope (HST) from September 1996 to August 2000 as the'ring opening angle to Earth and Sun increased from 4 deg to 24 deg, with a spread of phase angles between 0.3 deg and 6 deg at each opening angle. The rings were routinely observed in the five HST wideband UBVRI filters (F336W, F439W, F555W, F675W, and F814W) and occasionally in the F255W, F785LP, and F1042M filters. The emphasis in this series of papers will be on radial color (implying compositional) variations. In this first paper we describe the analysis technique and calibration procedure, note revisions in a previously published Voyager ring color data analysis, and present new results based on over 100 HST images. In the 300-600 nm spectral range where the rings are red, the 555nm/336nm ratio increases by about 14% as the phase angle increases from 0.3 deg to 6 deg. This effect, never reported previously for the rings, is significantly larger than the phase reddening which characterizes other icy objects, primarily because of the redness of the rings. However, there is no discernible tendency for color to vary with ring opening angle at a given phase angle, and there is no phase variation of color where the spectrum is flat. We infer from this combination of facts that multiple intraparticle scattering, either in a regolith or between facets of an unusually rough surface, is important in these geometries, but that multiple interparticle scattering in a vertically extended layer is not. Voyager color ratios at a phase angle of 14 deg are compatible with this trend, but calibration uncertainties prevent their use in quantitative modeling. Overall ring-average spectra are compatible with those of earlier work within calibration uncertainties, but ring spectra vary noticeably with region. We refine and subdivide the regions previously defined by others. The variation seen between radial profiles of ratios between different wavelength suggests the presence of multiple compositional components with different radial distributions. We present new radial profiles of far UV color ratio (F336W/F255W) showing, substantial global variations having a different radial structure than seen between 555 and 336nm. We also find evidence for absorption in the 850nm spectral range (a feature previously only weakly indicated in ring-averaged spectra) primarily through its radial variation; it is located primarily in the C ring, where the particles are known to have lower albedo, and is consistent with "interplanetary pollution" of the rings.

  3. Normative Data for a User-friendly Paradigm for Pattern Electroretinogram Recording

    PubMed Central

    Porciatti, Vittorio; Ventura, Lori M.

    2009-01-01

    Purpose To provide normative data for a user-friendly paradigm for the pattern electroretinogram (PERG) optimized for glaucoma screening (PERGLA). Design Prospective nonrandomized case series. Participants Ninety-three normal subjects ranging in age between 22 and 85 years. Methods A circular black–white grating of 25° visual angle, reversing 16.28 times per second, was presented on a television monitor placed inside a Ganzfeld bowl. The PERG was recorded simultaneously from both eyes with undilated pupils by means of skin cup electrodes taped over the lower eyelids. Reference electrodes were taped on the ipsilateral temples. Electrophysiologic signals were conventionally amplified, filtered, and digitized. Six hundred artifact-free repetitions were averaged. The response component at the reversal frequency was isolated automatically by digital Fourier transforms and was expressed as a deviation from the age-corrected average. The procedure took approximately 4 minutes. Main Outcome Measures Pattern electroretinogram amplitude (μV) and phase (π rad); response variability (coefficient of variation [CV] = standard deviation [SD] / mean × 100) of amplitude and phase of 2 partial averages that build up the PERG waveform; amplitude (μV) of background noise waveform, obtained by multiplying alternate sweeps by +1 and −1; and interocular asymmetry (CV of amplitude and phase of the PERG of the 2 eyes). Results On average, the PERG has a signal-to-noise ratio of more than 13:1. The CVs of intrasession and intersession variabilities in amplitude and phase are lower than 10% and 2%, respectively, and do not depend on the operator. The CV of interocular asymmetries in amplitude and phase are 9.8±8.8% and 1.5±1.4%, respectively. The PERG amplitude and phase decrease with age. Residuals of linear regression lines have normal distribution, with an SD of 0.1 log units for amplitude and 0.019 log units for phase. Age-corrected confidence limits (P<0.05) are defined as ±2 SD of residuals. Conclusions The PERGLA paradigm yields responses as reliable as the best previously reported using standard protocols. The ease of execution and interpretation of results of PERGLA indicate a potential value for objective screening and follow-up of glaucoma. PMID:14711729

  4. Numerical modeling of two-photon focal modulation microscopy with a sinusoidal phase filter.

    PubMed

    Chen, Rui; Shen, Shuhao; Chen, Nanguang

    2018-05-01

    A spatiotemporal phase modulator (STPM) is theoretically investigated using the vectorial diffraction theory. The STPM is equivalent to a time-dependent phase-only pupil filter that alternates between a homogeneous filter and a stripe-shaped filter with a sinusoidal phase distribution. It is found that two-photon focal modulation microscopy (TPFMM) using this STPM can significantly suppress the background contribution from out-of-focus ballistic excitation and achieve almost the same resolution as two-photon microscopy. The modulation depth is also evaluated and a compromise exists between the signal-to-background ratio and signal-to-noise ratio. The theoretical investigations provide important insights into future implementations of TPFMM and its potential to further extend the penetration depth of nonlinear microscopy in imaging multiple-scattering biological tissues. (2018) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

  5. Broadband CARS spectral phase retrieval using a time-domain Kramers–Kronig transform

    PubMed Central

    Liu, Yuexin; Lee, Young Jong; Cicerone, Marcus T.

    2014-01-01

    We describe a closed-form approach for performing a Kramers–Kronig (KK) transform that can be used to rapidly and reliably retrieve the phase, and thus the resonant imaginary component, from a broadband coherent anti-Stokes Raman scattering (CARS) spectrum with a nonflat background. In this approach we transform the frequency-domain data to the time domain, perform an operation that ensures a causality criterion is met, then transform back to the frequency domain. The fact that this method handles causality in the time domain allows us to conveniently account for spectrally varying nonresonant background from CARS as a response function with a finite rise time. A phase error accompanies KK transform of data with finite frequency range. In examples shown here, that phase error leads to small (<1%) errors in the retrieved resonant spectra. PMID:19412273

  6. Relationship between phases of quasi-decadal oscillations of total ozone and the 11-year solar cycle

    NASA Astrophysics Data System (ADS)

    Visheratin, K. N.

    2012-02-01

    Temporal variability of the relationship between the phases of quasi-decadal oscillations (QDOs) of total ozone (TO), measured at the Arosa station, and the Ri international sunspot number have been analyzed for the period of 1932-2009. Before the 1970s, the maximum phase of ozone QDOs lagged behind solar activity variations by about 2.5-2.8 years and later outstripped by about 1.5 years. We assumed that the TO QDOs in midlatitudes of the Northern Hemisphere were close to being in resonance with solar activity oscillations in the period from the mid-1960s to the mid-1970s and assessed the characteristic delay period of TO QDOs. The global distribution of phases and amplitudes of TO QDOs have been studied for the period from 1979 to 2008 based on satellite data. The maximum phase of TO QDOs first onsets in northern middle and high latitudes and coincides with the end of the growth phase of the 11-year solar cycle. In the tropics, the maximum oscillation phase lags behind by 0.5-1 year. The maximum phase lag near 40-50° S is about two years. The latitudinal variations of the phase of TO QDOs have been approximated.

  7. Schooling and Variation in the "COMT" Gene: The Devil Is in the Details

    ERIC Educational Resources Information Center

    Campbell, Daniel; Bick, Johanna; Yrigollen, Carolyn M.; Lee, Maria; Joseph, Antony; Chang, Joseph T.; Grigorenko, Elena L.

    2013-01-01

    Background: Schooling is considered one of the major contributors to the development of intelligence within societies and individuals. Genetic variation might modulate the impact of schooling and explain, at least partially, the presence of individual differences in classrooms. Method: We studied a sample of 1,502 children (mean age = 11.7 years)…

  8. The suprachiasmatic nucleus drives day-night variations in postprandial triglyceride uptake into skeletal muscle and brown adipose tissue.

    PubMed

    Moran-Ramos, Sofía; Guerrero-Vargas, Natali N; Mendez-Hernandez, Rebeca; Basualdo, Maria Del Carmen; Escobar, Carolina; Buijs, Ruud M

    2017-12-01

    What is the central question of this study? What are the factors influencing day-night variations in postprandial triglycerides? What is the main finding and its importance? Rats show low postprandial plasma triglyceride concentrations early in the active period that are attributable to a higher uptake by skeletal muscle and brown adipose tissue. We show that these day-night variations in uptake are driven by the suprachiasmatic nucleus, probably via a Rev-erbα-mediated mechanism and independent of locomotor activity. These findings highlight that the suprachiasmatic nucleus has a major role in day-night variations in plasma triglycerides and that disturbances in our biological clock might be an important risk factor contributing to development of postprandial hyperlipidaemia. Energy metabolism follows a diurnal pattern, mainly driven by the suprachiasmatic nucleus (SCN), and disruption of circadian regulation has been linked to metabolic abnormalities. Indeed, epidemiological evidence shows that night work is a risk factor for cardiovascular disease, and postprandial hyperlipidaemia is an important contributor. Therefore, the aim of this work was to investigate the factors that drive day-night variations in postprandial triglycerides (TGs). Intact and SCN-lesioned male Wistar rats were subjected to an oral fat challenge during the beginning of the rest phase (day) or the beginning of the active phase (night). The plasma TG profile was evaluated and tissue TG uptake assayed. After the fat challenge, intact rats showed lower postprandial plasma TG concentrations early in the night when compared with the day. However, no differences were observed in the rate of intestinal TG secretion between day and night. Instead, there was a higher uptake of TG by skeletal muscle and brown adipose tissue early in the active phase (night) when compared with the rest phase (day), and these variations were abolished in rats bearing bilateral SCN lesions. Rev-erbα gene expression suggests this as a possible mediator of the mechanism linking the SCN and day-night variations in TG uptake. These findings show that the SCN has a major role in day-night variations in plasma TGs by promoting TG uptake into skeletal muscle and brown adipose tissue. Consequently, disturbance of the biological clock might be an important risk factor contributing to the development of hyperlipidaemia. © 2017 The Authors. Experimental Physiology © 2017 The Physiological Society.

  9. Are Solar Activity Variations Amplified by the QBO: A Modeling Study

    NASA Technical Reports Server (NTRS)

    Mengel, J. G.; Mayr, H. G.; Drob, D. P.; Porter, H. S.; Bhartia, P. K. (Technical Monitor)

    2002-01-01

    Solar cycle activity effects (SCAE) in the lower and middle atmosphere, reported in several studies, are difficult to explain on the basis of the small changes in solar radiation that accompany the 11-year cycle. It is therefore natural to speculate that dynamical processes may come into play to produce a leverage. Such a leverage may be provided by the Quasi-Biennial Oscillation (QBO) in the zonal circulation of the stratosphere, which has been linked to solar activity variations. Driven primarily by wave mean flow interaction, the QBO period and its amplitude are variable but are also strongly influenced by the seasonal cycle in the solar radiation. This influence extends to low altitudes and is referred to as 'downward control'. Small changes in the solar radiative forcing may produce small changes in the period and phase of the QBO, but these in turn may produce measurable differences in the wind field. Thus, the QBO may be an amplifier of solar activity variations and a natural conduit of these variations to lower altitudes. To test this hypothesis, we conducted experiments with a 2D version of our Numerical Spectral Model that incorporates Hines' Doppler Spread Parameterization for small-scale gravity waves (GW). Solar cycle radiance variations (SCRV) are accounted for by changing the radiative heating rate on a logarithmic scale from 0.1% at the surface to 1% at 50 km to 10% at 100 km. With and without SCRV, but with the same GW flux, we then conduct numerical experiments to evaluate the magnitude of the SCAE in the zonal circulation. The numerical results indicate that, under certain conditions, the SCAE is significant and can extend to lower altitudes where the SCRV is small. For a modeled QBO period of 30 months, we find that the seasonal cycle in the solar forcing acts as a strong pacemaker to lock up the phase and period of the QBO. The SCAE then shows up primarily as a distinct but relatively weak amplitude modulation. But with a different QBO period between 30 and 34 (or less than 30, presumably) months, the seasonal phase lock is weak. Solar flux variations in the seasonal cycle then cause variations in the QBO period and phase. These amplify the SCAE to produce relatively large variations in the wind field. The SCAE in this case extends to mid-latitudes.

  10. Genetic variation and co-variation for fitness between intra-population and inter-population backgrounds in the red flour beetle, Tribolium castaneum

    PubMed Central

    Drury, Douglas W.; Wade, Michael J.

    2010-01-01

    Hybrids from crosses between populations of the flour beetle, Tribolium castaneum, express varying degrees of inviability and morphological abnormalities. The proportion of allopatric population hybrids exhibiting these negative hybrid phenotypes varies widely, from 3% to 100%, depending upon the pair of populations crossed. We crossed three populations and measured two fitness components, fertility and adult offspring numbers from successful crosses, to determine how genes segregating within populations interact in inter-population hybrids to cause the negative phenotypes. With data from crosses of 40 sires from each of three populations to groups of 5 dams from their own and two divergent populations, we estimated the genetic variance and covariance for breeding value of fitness between the intra- and inter-population backgrounds and the sire × dam-population interaction variance. The latter component of the variance in breeding values estimates the change in genic effects between backgrounds owing to epistasis. Interacting genes with a positive effect, prior to fixation, in the sympatric background but a negative effect in the hybrid background cause reproductive incompatibility in the Dobzhansky-Muller speciation model. Thus, the sire × dam-population interaction provides a way to measure the progress toward speciation of genetically differentiating populations on a trait by trait basis using inter-population hybrids. PMID:21044199

  11. Searching Neutrinoless Double Beta Decay with GERDA Phase II

    NASA Astrophysics Data System (ADS)

    Agostini, M.; Bakalyarov, A. M.; Balata, M.; Barabanov, I.; Baudis, L.; Bauer, C.; Bellotti, E.; Belogurov, S.; Bettini, A.; Bezrukov, L.; Bode, T.; Brudanin, V.; Brugnera, R.; Caldwell, A.; Cattadori, C.; Chernogorov, A.; Comellato, T.; D’Andrea, V.; Demidova, E. V.; di Marco, N.; Domula, A.; Doroshkevich, E.; Egorov, V.; Falkenstein, R.; Gangapshev, A.; Garfagnini, A.; Giordano, M.; Gooch, C.; Grabmayr, P.; Gurentsov, V.; Gusev, K.; Hahne, C.; Hakenmüller, J.; Hegai, A.; Heisel, M.; Hemmer, S.; Hiller, R.; Hofmann, W.; Holl, P.; Hult, M.; Inzhechik, L. V.; Ioannucci, L.; Csáthy, J. Janicskó; Jochum, J.; Junker, M.; Kazalov, V.; Kermaidic, Y.; Kihm, T.; Kirpichnikov, I. V.; Kirsch, A.; Kish, A.; Klimenko, A.; Kneißl, R.; Knöpfle, K. T.; Kochetov, O.; Kornoukhov, V. N.; Kuzminov, V. V.; Laubenstein, M.; Lazzaro, A.; Lindner, M.; Lippi, I.; Lubashevskiy, A.; Lubsandorzhiev, B.; Lutter, G.; Macolino, C.; Majorovits, B.; Maneschg, W.; Marissens, G.; Miloradovic, M.; Mingazheva, R.; Misiaszek, M.; Moseev, P.; Nemchenok, I.; Nisi, S.; Panas, K.; Pandola, L.; Pelczar, K.; Pullia, A.; Ransom, C.; Reissfelder, M.; Riboldi, S.; Rumyantseva, N.; Sada, C.; Sala, E.; Salamida, F.; Schmitt, C.; Schneider, B.; Schreiner, J.; Schulz, O.; Schweisshelm, B.; Schwingenheuer, B.; Schönert, S.; Schütz, A.-K.; Seitz, H.; Selivanenko, O.; Shevchik, E.; Shirchenko, M.; Simgen, H.; Smolnikov, A.; Stanco, L.; Vanhoefer, L.; Vasenko, A. A.; Veresnikova, A.; von Sturm, K.; Wagner, V.; Wegmann, A.; Wester, T.; Wiesinger, C.; Wojcik, M.; Yanovich, E.; Zhitnikov, I.; Zhukov, S. V.; Zinatulina, D.; Zschocke, A.; Zsigmond, A. J.; Zuber, K.; Zuzel, G.

    An observation of neutrinoless double beta (0νββ) decay would allow to shed light onto the nature of neutrinos. GERDA (GERmanium Detector Array) aims to discover this process in a background-free search using 76Ge. The experiment is located at the Laboratori Nazionali del Gran Sasso (LNGS) of the Istituto Nazionale di Fisica Nucleare (INFN) in Italy. Bare, isotopically enriched, high purity germanium detectors are operated in liquid argon. GERDA follows a staged approach. In Phase II 35.6 kg of enriched germanium detectors are operated since December 2015. The application of active background rejection methods, such as a liquid argon scintillation light read-out and pulse shape discrimination of germanium detector signals, allows to reduce the background index to the intended level of 10‑3 cts/(keVṡkgṡyr). No evidence for the 0νββ decay has been found in 23.2 kgṡyr of Phase II data, and together with data from Phase I the up-to-date most stringent half-life limit for this process in 76Ge has been established, at a median sensitivity of 5.8ṡ1025yr the 90% C.L. lower limit is 8.0ṡ1025yr.

  12. Frequency-independent approach to calculate physical optics radiations with the quadratic concave phase variations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wu, Yu Mao, E-mail: yumaowu@fudan.edu.cn; Teng, Si Jia, E-mail: sjteng12@fudan.edu.cn

    In this work, we develop the numerical steepest descent path (NSDP) method to calculate the physical optics (PO) radiations with the quadratic concave phase variations. With the surface integral equation method, the physical optics (PO) scattered fields are formulated and further reduced to the surface integrals. The high frequency physical critical points contributions, including the stationary phase points, the boundary resonance points and the vertex points are comprehensively studied via the proposed NSDP method. The key contributions of this work are twofold. One is that together with the PO integrals taking the quadratic parabolic and hyperbolic phase terms, this workmore » makes the NSDP theory be complete for treating the PO integrals with quadratic phase variations. Another is that, in order to illustrate the transition effect of the high frequency physical critical points, in this work, we consider and further extend the NSDP method to calculate the PO integrals with the coalescence of the high frequency critical points. Numerical results for the highly oscillatory PO integral with the coalescence of the critical points are given to verify the efficiency of the proposed NSDP method. The NSDP method could achieve the frequency independent computational workload and error controllable accuracy in all the numerical experiments, especially for the case of the coalescence of the high frequency critical points.« less

  13. Computed Tomography Findings of Bronchiectasis in Different Respiratory Phases Correlate with Pulmonary Function Test Data in Adults.

    PubMed

    do Amaral, Ricardo Holderbaum; Nin, Carlos S; de Souza, Vinicius V S; Alves, Giordano R T; Marchiori, Edson; Irion, Klaus; Meirelles, Gustavo S P; Hochhegger, Bruno

    2017-06-01

    To investigate bronchiectasis variations in different computed tomography (CT) respiratory phases, and their correlation with pulmonary function test (PFT) data, in adults. Retrospective data analysis from 63 patients with bronchiectasis according to CT criteria selected from the institution database and for whom PFT data were also available. Bronchiectasis diameter was measured on inspiratory and expiratory phases. Its area and matched airway-vessel ratios in both phases were also calculated. Finally, PFT results were compared with radiological measurements. Bronchiectatic airways were larger on inspiration than on expiration (mean cross-sectional area, 69.44 vs. 40.84 mm 2 ; p < 0.05) as were airway-vessel ratios (2.1 vs. 1.4; p < 0.05). Cystic bronchiectasis cases showed the least variation in cross-sectional area (48%). Mean predicted values of forced expiratory volume in 1 s (FEV1) and forced vital capacity (FVC) were 81.5 and 77.2%, respectively, in the group in which bronchiectasis could not be identified on expiratory images, and 58.3 and 56.0%, respectively, in the other group (p < 0.05). Variation in bronchiectasis area was associated with poorer lung function (r = 0.32). Bronchiectasis detection, diameter, and area varied significantly according to CT respiratory phase, with non-reducible bronchiectasis showing greater lung function impairment.

  14. Modulation instability, Fermi-Pasta-Ulam recurrence, rogue waves, nonlinear phase shift, and exact solutions of the Ablowitz-Ladik equation.

    PubMed

    Akhmediev, Nail; Ankiewicz, Adrian

    2011-04-01

    We study modulation instability (MI) of the discrete constant-background wave of the Ablowitz-Ladik (A-L) equation. We derive exact solutions of the A-L equation which are nonlinear continuations of MI at longer times. These periodic solutions comprise a family of two-parameter solutions with an arbitrary background field and a frequency of initial perturbation. The solutions are recurrent, since they return the field state to the original constant background solution after the process of nonlinear evolution has passed. These solutions can be considered as a complete resolution of the Fermi-Pasta-Ulam paradox for the A-L system. One remarkable consequence of the recurrent evolution is the nonlinear phase shift gained by the constant background wave after the process. A particular case of this family is the rational solution of the first-order or fundamental rogue wave.

  15. Focal plane infrared readout circuit with automatic background suppression

    NASA Technical Reports Server (NTRS)

    Pain, Bedabrata (Inventor); Yang, Guang (Inventor); Sun, Chao (Inventor); Shaw, Timothy J. (Inventor); Wrigley, Chris J. (Inventor)

    2002-01-01

    A circuit for reading out a signal from an infrared detector includes a current-mode background-signal subtracting circuit having a current memory which can be enabled to sample and store a dark level signal from the infrared detector during a calibration phase. The signal stored by the current memory is subtracted from a signal received from the infrared detector during an imaging phase. The circuit also includes a buffered direct injection input circuit and a differential voltage readout section. By performing most of the background signal estimation and subtraction in a current mode, a low gain can be provided by the buffered direct injection input circuit to keep the gain of the background signal relatively small, while a higher gain is provided by the differential voltage readout circuit. An array of such readout circuits can be used in an imager having an array of infrared detectors. The readout circuits can provide a high effective handling capacity.

  16. Family Obligation and the Academic Motivation of Adolescents from Asian, Latin American, and European Backgrounds.

    ERIC Educational Resources Information Center

    Fuligni, Andrew J.

    2001-01-01

    Studied ethnic variations in academic motivation among 1,000 adolescents from Asian, Latin American, and European backgrounds. Found that a sense of family obligation was associated with greater belief in the value of education and accounts for tendency of Asian and Latin American adolescents to have greater academic motivation than their equally…

  17. Characteristics of Greek Adolescents in Sydney. A Survey of Greek-Australian High School Students.

    ERIC Educational Resources Information Center

    Athanasou, James A.

    This report discusses variations in background of Greek-Australian high school students in Sydney, Australia, and examines and describes the pattern of individual responses to the social context. Literature on the ethnic background of Greeks in Australia is briefly reviewed, and previous findings are presented to articulate some of the issues…

  18. Overview of Spontaneous Frequency Chirping in Confined Plasmas

    NASA Astrophysics Data System (ADS)

    Berk, Herbert

    2012-10-01

    Spontaneous rapid frequency chirping is now a commonly observed phenomenon in plasmas with an energetic particle component. These particles typically induce so called weak instabilities, where they excite background waves that the plasma can support such as shear Alfven waves. The explanation for this phenomenon attributes the frequency chirping to the formation of phase space structures in the form of holes and clumps. Normally a saturated mode, in the presence of background dissipation, would be expected decay after saturation as the background plasma absorbs the energy of the excited wave. However the phase space structures take an alternate route, and move to a regions of phase space that are lower energy states of the energetic particle distribution. Through the wave-resonant particle interaction, this movement is locked to the frequency observed by the wave. This phenomenon implies that alternate mechanisms for plasma relaxation need to be considered for plasma states new marginal stability. It is also possible that these chirping mechanisms can be used to advantage to externally control states of plasma.

  19. Melting temperature and enthalpy variations of phase change materials (PCMs): a differential scanning calorimetry (DSC) analysis

    NASA Astrophysics Data System (ADS)

    Sun, Xiaoqin; Lee, Kyoung Ok; Medina, Mario A.; Chu, Youhong; Li, Chuanchang

    2018-06-01

    Differential scanning calorimetry (DSC) analysis is a standard thermal analysis technique used to determine the phase transition temperature, enthalpy, heat of fusion, specific heat and activation energy of phase change materials (PCMs). To determine the appropriate heating rate and sample mass, various DSC measurements were carried out using two kinds of PCMs, namely N-octadecane paraffin and calcium chloride hexahydrate. The variations in phase transition temperature, enthalpy, heat of fusion, specific heat and activation energy were observed within applicable heating rates and sample masses. It was found that the phase transition temperature range increased with increasing heating rate and sample mass; while the heat of fusion varied without any established pattern. The specific heat decreased with the increase of heating rate and sample mass. For accuracy purpose, it is recommended that for PCMs with high thermal conductivity (e.g. hydrated salt) the focus will be on heating rate rather than sample mass.

  20. A Model for Ferroelectric Phase Shifters

    NASA Technical Reports Server (NTRS)

    Romanofsky, Robert R.; Qureshi, A. Haq

    2000-01-01

    Novel microwave phase shifters consisting of coupled microstrip lines on thin ferroelectric films have been demonstrated recently. A theoretical model useful for predicting the propagation characteristics (insertion phase shift, dielectric loss, impedance, and bandwidth) is presented here. The model is based on a variational solution for line capacitance and coupled strip transmission line theory.

  1. Husbands' and Wives' Perceptions of Marital Fairness across the Family Life Cycle.

    ERIC Educational Resources Information Center

    Peterson, Candida C.

    1990-01-01

    Evaluated marital fairness, or subjective balance between spouses' gains and losses, by surveying 134 married Australians representing 5 family life cycle phases. Findings showed husbands felt more equitably treated both initially and after children's departure than during phases with children in home, wives showed little variation with phase, and…

  2. Identifying the Development in Phase and Amplitude of Dipole and Multipole Radiation

    ERIC Educational Resources Information Center

    Rice, E. M.; Bradshaw, D. S.; Saadi, K.; Andrews, D. L.

    2012-01-01

    The spatial variation in phase and the propagating wave-front of plane wave electromagnetic radiation are widely familiar text-book territory. In contrast, the developing amplitude and phase of radiation emitted by a dipole or multipole source generally receive less attention, despite the prevalence of these systems. There is additional complexity…

  3. Two-order parameters theory of the metal-insulator phase transition kinetics in the magnetic field

    NASA Astrophysics Data System (ADS)

    Dubovskii, L. B.

    2018-05-01

    The metal-insulator phase transition is considered within the framework of the Ginzburg-Landau approach for the phase transition described with two coupled order parameters. One of the order parameters is the mass density which variation is responsible for the origin of nonzero overlapping of the two different electron bands and the appearance of free electron carriers. This transition is assumed to be a first-order phase one. The free electron carriers are described with the vector-function representing the second-order parameter responsible for the continuous phase transition. This order parameter determines mostly the physical properties of the metal-insulator transition and leads to a singularity of the surface tension at the metal-insulator interface. The magnetic field is involved into the consideration of the system. The magnetic field leads to new singularities of the surface tension at the metal-insulator interface and results in a drastic variation of the phase transition kinetics. A strong singularity in the surface tension results from the Landau diamagnetism and determines anomalous features of the metal-insulator transition kinetics.

  4. Adolescent, but not adult, rats exhibit ethanol-mediated appetitive second-order conditioning

    PubMed Central

    Pautassi, Ricardo Marcos; Myers, Mallory; Spear, Linda Patia; Molina, Juan Carlos; Spear, Norman E.

    2008-01-01

    Background Adolescent rats are less sensitive to the sedative effects of ethanol than older animals. They also seem to perceive the reinforcing properties of ethanol. However, unlike neonates or infants, ethanol-mediated appetitive behavior has yet to be clearly shown in adolescents. Appetitive ethanol reinforcement was assessed in adolescent (postnatal day 33, P33) and adult rats (P71) through second-order conditioning (SOC). Methods On P32 or P70 animals were intragastrically administered ethanol (0.5 or 2.0 g/kg) paired with intraoral pulses of sucrose (CS1, first-order conditioning phase). CS1 delivery took place either 5-20 (Early pairing) or 30-45 (Late pairing) min following ethanol. CS1 exposure and ethanol administration were separated by 240 min in unpaired controls. On P33 or P71, animals were presented the CS1 (second-order conditioning phase) while in a distinctive chamber (CS2). Then, they were tested for CS2 preference. Results Early and late paired adolescents, but not adults, had greater preference for the CS2 than controls, a result indicative of ontogenetic variation in ethanol-mediated reinforcement. During the CS1 - CS2 associative phase, paired adolescents given 2.0 g/kg ethanol wall-climbed more than controls. Blood and brain ethanol levels associated with the 0.5 and 2.0 g/kg doses at the onset of each conditioning phase did not differ substantially across age, with mean BECs of 38 and 112 mg %. Conclusions These data indicate age-related differences between adolescent and adult rats in terms of sensitivity to ethanol’s motivational effects. Adolescents exhibit high sensitivity for ethanol’s appetitive effects. These animals also showed EtOH-mediated behavioral activation during the second-order conditioning phase. The SOC preparation provides a valuable conditioning model for assessing ethanol’s motivational effects across ontogeny. PMID:18782343

  5. A Balanced Diet Is Necessary for Proper Entrainment Signals of the Mouse Liver Clock

    PubMed Central

    Hirao, Akiko; Tahara, Yu; Kimura, Ichiro; Shibata, Shigenobu

    2009-01-01

    Background The peripheral circadian clock in mice is entrained not only by light-dark cycles but also by daily restricted feeding schedules. Behavioral and cell culture experiments suggest an increase in glucose level as a factor in such feeding-induced entrainment. For application of feeding-induced entrainment in humans, nutrient content and dietary variations should be considered. Principal Finding To elucidate the food composition necessary for dietary entrainment, we examined whether complete or partial substitution of dietary nutrients affected phase shifts in liver clocks of mice. Compared with fasting mice or ad libitum fed mice, the liver bioluminescence rhythm advanced by 3–4 h on the middle day in Per2::luciferase knock-in mice that were administered a standard mouse diet, i.e. AIN-93M formula [0.6–0.85 g/10 g mouse BW] (composition: 14% casein, 47% cornstarch, 15% gelatinized cornstarch, 10% sugar, 4% soybean oil, and 10% other [fiber, vitamins, minerals, etc.]), for 2 days. When each nutrient was tested alone (100% nutrient), an insignificant weak phase advance was found to be induced by cornstarch and soybean oil, but almost no phase advance was induced by gelatinized cornstarch, high-amylose cornstarch, glucose, sucrose, or casein. A combination of glucose and casein without oil, vitamin, or fiber caused a significant phase advance. When cornstarch in AIN-93M was substituted with glucose, sucrose, fructose, polydextrose, high-amylose cornstarch, or gelatinized cornstarch, the amplitude of phase advance paralleled the increase in blood glucose concentration. Conclusions Our results strongly suggest the following: (1) balanced diets containing carbohydrates/sugars and proteins are good for restricted feeding-induced entrainment of the peripheral circadian clock and (2) a balanced diet that increases blood glucose, but not by sugar alone, is suitable for entrainment. These findings may assist in the development of dietary recommendations for on-board meals served to air travelers and shift workers to reduce jet lag-like symptoms. PMID:19738906

  6. Linguistic contributions to speech-on-speech masking for native and non-native listeners: language familiarity and semantic content.

    PubMed

    Brouwer, Susanne; Van Engen, Kristin J; Calandruccio, Lauren; Bradlow, Ann R

    2012-02-01

    This study examined whether speech-on-speech masking is sensitive to variation in the degree of similarity between the target and the masker speech. Three experiments investigated whether speech-in-speech recognition varies across different background speech languages (English vs Dutch) for both English and Dutch targets, as well as across variation in the semantic content of the background speech (meaningful vs semantically anomalous sentences), and across variation in listener status vis-à-vis the target and masker languages (native, non-native, or unfamiliar). The results showed that the more similar the target speech is to the masker speech (e.g., same vs different language, same vs different levels of semantic content), the greater the interference on speech recognition accuracy. Moreover, the listener's knowledge of the target and the background language modulate the size of the release from masking. These factors had an especially strong effect on masking effectiveness in highly unfavorable listening conditions. Overall this research provided evidence that that the degree of target-masker similarity plays a significant role in speech-in-speech recognition. The results also give insight into how listeners assign their resources differently depending on whether they are listening to their first or second language. © 2012 Acoustical Society of America

  7. Detection of exudates in fundus imagery using a constant false-alarm rate (CFAR) detector

    NASA Astrophysics Data System (ADS)

    Khanna, Manish; Kapoor, Elina

    2014-05-01

    Diabetic retinopathy is the leading cause of blindness in adults in the United States. The presence of exudates in fundus imagery is the early sign of diabetic retinopathy so detection of these lesions is essential in preventing further ocular damage. In this paper we present a novel technique to automatically detect exudates in fundus imagery that is robust against spatial and temporal variations of background noise. The detection threshold is adjusted dynamically, based on the local noise statics around the pixel under test in order to maintain a pre-determined, constant false alarm rate (CFAR). The CFAR detector is often used to detect bright targets in radar imagery where the background clutter can vary considerably from scene to scene and with angle to the scene. Similarly, the CFAR detector addresses the challenge of detecting exudate lesions in RGB and multispectral fundus imagery where the background clutter often exhibits variations in brightness and texture. These variations present a challenge to common, global thresholding detection algorithms and other methods. Performance of the CFAR algorithm is tested against a publicly available, annotated, diabetic retinopathy database and preliminary testing suggests that performance of the CFAR detector proves to be superior to techniques such as Otsu thresholding.

  8. Linguistic contributions to speech-on-speech masking for native and non-native listeners: Language familiarity and semantic content

    PubMed Central

    Brouwer, Susanne; Van Engen, Kristin J.; Calandruccio, Lauren; Bradlow, Ann R.

    2012-01-01

    This study examined whether speech-on-speech masking is sensitive to variation in the degree of similarity between the target and the masker speech. Three experiments investigated whether speech-in-speech recognition varies across different background speech languages (English vs Dutch) for both English and Dutch targets, as well as across variation in the semantic content of the background speech (meaningful vs semantically anomalous sentences), and across variation in listener status vis-à-vis the target and masker languages (native, non-native, or unfamiliar). The results showed that the more similar the target speech is to the masker speech (e.g., same vs different language, same vs different levels of semantic content), the greater the interference on speech recognition accuracy. Moreover, the listener’s knowledge of the target and the background language modulate the size of the release from masking. These factors had an especially strong effect on masking effectiveness in highly unfavorable listening conditions. Overall this research provided evidence that that the degree of target-masker similarity plays a significant role in speech-in-speech recognition. The results also give insight into how listeners assign their resources differently depending on whether they are listening to their first or second language. PMID:22352516

  9. Analysis of river health variation under the background of urbanization based on entropy weight and matter-element model: A case study in Huzhou City in the Yangtze River Delta, China.

    PubMed

    Pan, Guangbo; Xu, Youpeng; Yu, Zhihui; Song, Song; Zhang, Yuan

    2015-05-01

    Maintaining the health of the river ecosystem is an essential ecological and environmental guarantee for regional sustainable development and one of the basic objectives in water resource management. With the rapid development of urbanization, the river health situation is deteriorating, especially in urban areas. The river health evaluation is a complex process that involves various natural and social components; eight eco-hydrological indicators were selected to establish an evaluation system, and the variation of river health status under the background of urbanization was explored based on entropy weight and matter-element model. The comprehensive correlative degrees of urban river health of Huzhou City in 2001, 2006 and 2010 were then calculated. The results indicated that river health status of the study area was in the direction of pathological trend, and the impact of limiting factors (such as Shannon's diversity index and agroforestry output growth rate) played an important role in river health. The variation of maximum correlative degree could be classified into stationary status, deterioration status, deterioration-to-improvement status, and improvement-to-deterioration status. There was a severe deterioration situation of river health under the background of urbanization. Copyright © 2015 Elsevier Inc. All rights reserved.

  10. PSSRdb: a relational database of polymorphic simple sequence repeats extracted from prokaryotic genomes.

    PubMed

    Kumar, Pankaj; Chaitanya, Pasumarthy S; Nagarajaram, Hampapathalu A

    2011-01-01

    PSSRdb (Polymorphic Simple Sequence Repeats database) (http://www.cdfd.org.in/PSSRdb/) is a relational database of polymorphic simple sequence repeats (PSSRs) extracted from 85 different species of prokaryotes. Simple sequence repeats (SSRs) are the tandem repeats of nucleotide motifs of the sizes 1-6 bp and are highly polymorphic. SSR mutations in and around coding regions affect transcription and translation of genes. Such changes underpin phase variations and antigenic variations seen in some bacteria. Although SSR-mediated phase variation and antigenic variations have been well-studied in some bacteria there seems a lot of other species of prokaryotes yet to be investigated for SSR mediated adaptive and other evolutionary advantages. As a part of our on-going studies on SSR polymorphism in prokaryotes we compared the genome sequences of various strains and isolates available for 85 different species of prokaryotes and extracted a number of SSRs showing length variations and created a relational database called PSSRdb. This database gives useful information such as location of PSSRs in genomes, length variation across genomes, the regions harboring PSSRs, etc. The information provided in this database is very useful for further research and analysis of SSRs in prokaryotes.

  11. Identification and Modelling of the In-Plane Reinforcement Orientation Variations in a CFRP Laminate Produced by Manual Lay-Up

    NASA Astrophysics Data System (ADS)

    Davila, Yves; Crouzeix, Laurent; Douchin, Bernard; Collombet, Francis; Grunevald, Yves-Henri

    2017-08-01

    Reinforcement angle orientation has a significant effect on the mechanical properties of composite materials. This work presents a methodology to introduce variable reinforcement angles into finite element (FE) models of composite structures. The study of reinforcement orientation variations uses meta-models to identify and control a continuous variation across the composite ply. First, the reinforcement angle is measured through image analysis techniques of the composite plies during the lay-up phase. Image analysis results show that variations in the mean ply orientations are between -0.5 and 0.5° with standard deviations ranging between 0.34 and 0.41°. An automatic post-treatment of the images determines the global and local angle variations yielding good agreements visually and numerically between the analysed images and the identified parameters. A composite plate analysed at the end of the cooling phase is presented as a case of study. Here, the variation in residual strains induced by the variability in the reinforcement orientation are up to 28% of the strain field of the homogeneous FE model. The proposed methodology has shown its capabilities to introduce material and geometrical variability into FE analysis of layered composite structures.

  12. Identification and Modelling of the In-Plane Reinforcement Orientation Variations in a CFRP Laminate Produced by Manual Lay-Up

    NASA Astrophysics Data System (ADS)

    Davila, Yves; Crouzeix, Laurent; Douchin, Bernard; Collombet, Francis; Grunevald, Yves-Henri

    2018-06-01

    Reinforcement angle orientation has a significant effect on the mechanical properties of composite materials. This work presents a methodology to introduce variable reinforcement angles into finite element (FE) models of composite structures. The study of reinforcement orientation variations uses meta-models to identify and control a continuous variation across the composite ply. First, the reinforcement angle is measured through image analysis techniques of the composite plies during the lay-up phase. Image analysis results show that variations in the mean ply orientations are between -0.5 and 0.5° with standard deviations ranging between 0.34 and 0.41°. An automatic post-treatment of the images determines the global and local angle variations yielding good agreements visually and numerically between the analysed images and the identified parameters. A composite plate analysed at the end of the cooling phase is presented as a case of study. Here, the variation in residual strains induced by the variability in the reinforcement orientation are up to 28% of the strain field of the homogeneous FE model. The proposed methodology has shown its capabilities to introduce material and geometrical variability into FE analysis of layered composite structures.

  13. Is the continuous matter creation cosmology an alternative to ΛCDM?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fabris, J.C.; Pacheco, J.A. de Freitas; Piattella, O.F., E-mail: fabris@pq.cnpq.br, E-mail: pacheco@oca.eu, E-mail: oliver.piattella@pq.cnpq.br

    2014-06-01

    The matter creation cosmology is revisited, including the evolution of baryons and dark matter particles. The creation process affects only dark matter and not baryons. The dynamics of the ΛCDM model can be reproduced only if two conditions are satisfied: 1) the entropy density production rate and the particle density variation rate are equal and 2) the (negative) pressure associated to the creation process is constant. However, the matter creation model predicts a present dark matter-to-baryon ratio much larger than that observed in massive X-ray clusters of galaxies, representing a potential difficulty for the model. In the linear regime, amore » fully relativistic treatment indicates that baryons are not affected by the creation process but this is not the case for dark matter. Both components evolve together at early phases but lately the dark matter density contrast decreases since the background tends to a constant value. This behaviour produces a negative growth factor, in disagreement with observations, being a further problem for this cosmology.« less

  14. Dynamical transitions associated with turbulence in a helicon plasma

    NASA Astrophysics Data System (ADS)

    Light, Adam D.; Tian, Li; Chakraborty Thakur, Saikat; Tynan, George R.

    2017-10-01

    Diagnostic capabilities are often cited as a limiting factor in our understanding of transport in fusion devices. Increasingly advanced multichannel diagnostics are being applied to classify transport regimes and to search for ``trigger'' features that signal an oncoming dynamical event, such as an ELM or an L-H transition. In this work, we explore a technique that yields information about global properties of plasma dynamics from a single time series of a relevant plasma quantity. Electrostatic probe data from the Controlled Shear Decorrelation eXperiment (CSDX) is analyzed using recurrence quantification analysis (RQA) in the context of previous work on the transition to weak drift-wave turbulence. The recurrence characteristics of a phase space trajectory provide a quantitative means to classify dynamics and identify transitions in a complex system. We present and quantify dynamical variations in the plasma variables as a function of the background magnetic field strength. A dynamical transition corresponding to the emergence of broadband fluctuations is identified using RQA measures.

  15. Designing Inquiry Starters

    NASA Astrophysics Data System (ADS)

    Kluger-Bell, B.

    2010-12-01

    The term "Inquiry Starter" comes from the Institute for Inquiry's model for teaching and learning science through inquiry. It refers to the first phase of an inquiry activity where learners engage in actions that stimulate their curiosity and generate questions for further investigation. In the Professional Development Program, staff and participants have designed a wide variety of inquiry activities with a number of variations on the inquiry starter. This has provided a laboratory for examining inquiry starter design. In this paper, I describe and examine in detail the elements of this design and how the design of those elements is related to achieving learning objectives. There are a number of important common objectives in all inquiry starters. For example, all starters must define a domain for investigation and engage the learner's curiosity in that domain. There are also critical differences in learning objectives depending on the content area being studied, the learners' background knowledge and skills, and many other factors. In this paper I examine designs for both of these types of objectives.

  16. Ionospheric variations during sudden stratospheric warming in the high- and mid-latitude regions

    NASA Astrophysics Data System (ADS)

    Yasyukevich, Anna; Voeykov, Sergey; Mylnikova, Anna

    2017-04-01

    The ionospheric dynamic in the high- and middle-latitude regions during the periods of sudden stratospheric warmings (SSW) was studied by using the international network of phase dual-frequency GPS/GLONASS receivers and the vertical sounding data. Twelve SSW events that occurred in the Northern Hemisphere 2006 through 2013 were considered. In order to identify the possible response of the ionosphere to SSW events, we carried out the analysis of the total electron (TEC) and the F2-layer maximum electron density (NmF2) deviations from the background level. We have also studied changes of the level of total electron content (TEC) wave-like variations characterized by a special index WTEC. The index reflects the intensity of medium- and large-scale traveling ionospheric disturbances. The dynamics of the high- and middle-latitude ionosphere at the points near the SSW areas was found to differ from the regular. For a large number of events, it is shown that, despite quiet geomagnetic conditions, a noticeable decrease in the NmF2 and TEC values (by 5-10% relative to the background level) is observed during the SSW evolution and maximum stages. On the contrary, for 10-20 days after the SSW maxima, NmF2 and TEC significantly exceed the monthly averaged values. Moreover, these electron density changes are observed for both strong and weak stratospheric warmings, and are recorded mainly during daytime. The observed SSW effects in the polar and mid-latitude ionosphere are assumed to be probably associated with the changes in the neutral composition at the thermospheric heights that affect the F2-layer electron density. The study is supported by the Russian Foundation for Basic Research under Grant No. 16-35-60018, as well as by the RF President Grant of Public Support for RF Leading Scientific Schools (NSh-6894.2016.5).

  17. Improving Reliability of a Residency Interview Process

    PubMed Central

    Serres, Michelle L.; Gundrum, Todd E.

    2013-01-01

    Objective. To improve the reliability and discrimination of a pharmacy resident interview evaluation form, and thereby improve the reliability of the interview process. Methods. In phase 1 of the study, authors used a Many-Facet Rasch Measurement model to optimize an existing evaluation form for reliability and discrimination. In phase 2, interviewer pairs used the modified evaluation form within 4 separate interview stations. In phase 3, 8 interviewers individually-evaluated each candidate in one-on-one interviews. Results. In phase 1, the evaluation form had a reliability of 0.98 with person separation of 6.56; reproducibly, the form separated applicants into 6 distinct groups. Using that form in phase 2 and 3, our largest variation source was candidates, while content specificity was the next largest variation source. The phase 2 g-coefficient was 0.787, while confirmatory phase 3 was 0.922. Process reliability improved with more stations despite fewer interviewers per station—impact of content specificity was greatly reduced with more interview stations. Conclusion. A more reliable, discriminating evaluation form was developed to evaluate candidates during resident interviews, and a process was designed that reduced the impact from content specificity. PMID:24159209

  18. A photometric function of planetary surfaces for gourmets

    NASA Astrophysics Data System (ADS)

    Shkuratov, Yuriy; Korokhin, Viktor; Shevchenko, Vasilij; Mikhalchenko, Olga; Belskaya, Irina; Kaydash, Vadym; Videen, Gorden; Zubko, Evgenij; Velikodsky, Yuriy

    2018-03-01

    A new photometric model with small number of parameters is presented. The model is based on an assumption that there exist such surfaces for which spatial brightness variations caused by small topography undulations can be reproduced exactly by corresponding spatial variations of albedo. This indistinguishability results in a differential equation suggesting a new photometric function that generalizes, in particular, the Akimov disk-function. Our model provides excellent fits in a wide phase-angle range for integral observations of asteroids of different albedos. We also carried out fitting to integral observations of the Moon and Mercury, confirming difficulties in describing Mercury's phase function at large phase angles, which were also found for the Hapke model. Comparisons of global latitude and longitude trends with our model calculations have shown good coincidence for the Moon. To retrieve the lunar trends, we use the phase-ratio technique, applying it to our telescope observations. Mapping the model parameters using LROC WAC data were carried out for a region comprising the Reiner Gamma formation. This mapping allows us to calculate phase-ratio images of the region, showing at large phase angles systematically steeper phase curves of young craters and smaller steepness for the very Reiner Gamma formation.

  19. Discriminability measures for predicting readability of text on textured backgrounds

    NASA Technical Reports Server (NTRS)

    Scharff, L. F.; Hill, A. L.; Ahumada, A. J. Jr; Watson, A. B. (Principal Investigator)

    2000-01-01

    Several discriminability measures were examined for their ability to predict reading search times for three levels of text contrast and a range of backgrounds (plain, a periodic texture, and four spatial-frequency-filtered textures created from the periodic texture). Search times indicate that these background variations only affect readability when the text contrast is low, and that spatial frequency content of the background affects readability. These results were not well predicted by the single variables of text contrast (Spearman rank correlation = -0.64) and background RMS contrast (0.08), but a global masking index and a spatial-frequency-selective masking index led to better predictions (-0.84 and -0.81, respectively). c2000 Optical Society of America.

  20. An EPIC Tale of the Quiescent Particle Background

    NASA Technical Reports Server (NTRS)

    Snowden, S.L.; Kuntz, K.D.

    2017-01-01

    Extended Source Analysis Software Use Based Empirical Investigation: (1) Builds quiescent particle background (QPB) spectra and images for observations of extended sources that fill (or mostly fill) the FOV i.e., annular background subtraction won't work. (2) Uses a combination of Filter Wheel Closed (FWC) and corner data to capture the spectral, spatial, and temporal variation of the quiescent particle background. New Work: (1) Improved understanding of the QPB (aided by adding a whole lot of data since 2008). (2) Significantly improved statistics (did I mention a LOT more data?). (3) Better characterization and identification of anomalous states. (4) Builds backgrounds for some anomalous state. (5) New efficient method for non-anomalous states.

  1. Solar Cycle Variations and Equatorial Oscillations: Modeling Study

    NASA Technical Reports Server (NTRS)

    Mayr, H. G.; Mengel, J. G.; Drob, D. P.; Chan, K. L.; Porter, H. S.; Bhartia, P. K. (Technical Monitor)

    2001-01-01

    Solar cycle activity effects (SCAE) in the lower and middle atmosphere, reported in several studies, are difficult to explain on the basis of the small changes in solar radiation that accompany the 11-year cycle, It is therefore natural to speculate that dynamical processes may come into play to produce a leverage. Such a leverage may be provided by the Quasi-Biennial Oscillation (QBO) in the zonal circulation of the stratosphere, which has been linked to solar activity variations. Driven primarily by wave mean flow interaction, the QBO period and its amplitude are variable but are also strongly influenced by the seasonal cycle in the solar radiation. This influence extends to low altitudes referred to as "downward control". Relatively small changes in solar radiative forcing can produce small changes in the period and phase of the QBO, but this in turn can produce measurable differences in the wind field. Thus, the QBO may be an amplifier of solar activity variations and a natural conduit of these variations to lower altitudes. To test this hypothesis, we conducted experiments with a 2D (two-dimensional) version of our Numerical Spectral Model that incorporates Hines' Doppler Spread Parameterization for small-scale gravity waves (GW). Solar cycle radiance variations (SCRV) are accounted for by changing the radiative heating rate on a logarithmic scale from 0.1 % at the surface to 1 % at 50 km to 10% at 100 km. With and without SCRV, but with the same GW flux, we then conduct numerical experiments to evaluate the magnitude of the SCAE in the zonal circulation. The numerical results indicate that, under certain conditions, the SCAE is significant and can extend to lower altitudes where the SCRV is inconsequential. At 20-km the differences in the modeled wind velocities are as large as 5 m/s. For a modeled QBO period of 30 months, we find that the seasonal cycle in the solar forcing (through the Semi-annual Oscillation (SAO)) acts as a strong pacemaker to lockup the phase and period of the QBO. The SCAE then shows up primarily as a distinct but relatively weak amplitude modulation. But with the QBO period between 30 and 34 (or less than 30, presumably) months, the seasonal phase lock is weak. Solar flux radiance variations in the seasonal cycle then cause variations in the QBO period and phase that amplify the SCAE to produce relatively large variations in the wind field. These variations also extend to mid latitudes.

  2. Efficient generation of image chips for training deep learning algorithms

    NASA Astrophysics Data System (ADS)

    Han, Sanghui; Fafard, Alex; Kerekes, John; Gartley, Michael; Ientilucci, Emmett; Savakis, Andreas; Law, Charles; Parhan, Jason; Turek, Matt; Fieldhouse, Keith; Rovito, Todd

    2017-05-01

    Training deep convolutional networks for satellite or aerial image analysis often requires a large amount of training data. For a more robust algorithm, training data need to have variations not only in the background and target, but also radiometric variations in the image such as shadowing, illumination changes, atmospheric conditions, and imaging platforms with different collection geometry. Data augmentation is a commonly used approach to generating additional training data. However, this approach is often insufficient in accounting for real world changes in lighting, location or viewpoint outside of the collection geometry. Alternatively, image simulation can be an efficient way to augment training data that incorporates all these variations, such as changing backgrounds, that may be encountered in real data. The Digital Imaging and Remote Sensing Image Image Generation (DIRSIG) model is a tool that produces synthetic imagery using a suite of physics-based radiation propagation modules. DIRSIG can simulate images taken from different sensors with variation in collection geometry, spectral response, solar elevation and angle, atmospheric models, target, and background. Simulation of Urban Mobility (SUMO) is a multi-modal traffic simulation tool that explicitly models vehicles that move through a given road network. The output of the SUMO model was incorporated into DIRSIG to generate scenes with moving vehicles. The same approach was used when using helicopters as targets, but with slight modifications. Using the combination of DIRSIG and SUMO, we quickly generated many small images, with the target at the center with different backgrounds. The simulations generated images with vehicles and helicopters as targets, and corresponding images without targets. Using parallel computing, 120,000 training images were generated in about an hour. Some preliminary results show an improvement in the deep learning algorithm when real image training data are augmented with the simulated images, especially when obtaining sufficient real data was particularly challenging.

  3. Wavelet filtered shifted phase-encoded joint transform correlation for face recognition

    NASA Astrophysics Data System (ADS)

    Moniruzzaman, Md.; Alam, Mohammad S.

    2017-05-01

    A new wavelet-filtered-based Shifted- phase-encoded Joint Transform Correlation (WPJTC) technique has been proposed for efficient face recognition. The proposed technique uses discrete wavelet decomposition for preprocessing and can effectively accommodate various 3D facial distortions, effects of noise, and illumination variations. After analyzing different forms of wavelet basis functions, an optimal method has been proposed by considering the discrimination capability and processing speed as performance trade-offs. The proposed technique yields better correlation discrimination compared to alternate pattern recognition techniques such as phase-shifted phase-encoded fringe-adjusted joint transform correlator. The performance of the proposed WPJTC has been tested using the Yale facial database and extended Yale facial database under different environments such as illumination variation, noise, and 3D changes in facial expressions. Test results show that the proposed WPJTC yields better performance compared to alternate JTC based face recognition techniques.

  4. Broadband tunable microwave photonic phase shifter with low RF power variation in a high-Q AlN microring.

    PubMed

    Liu, Xianwen; Sun, Changzheng; Xiong, Bing; Wang, Jian; Wang, Lai; Han, Yanjun; Hao, Zhibiao; Li, Hongtao; Luo, Yi; Yan, Jianchang; Wei, Tong Bo; Zhang, Yun; Wang, Junxi

    2016-08-01

    An all-optically tunable microwave photonic phase shifter is demonstrated based on an epitaxial aluminum nitride (AlN) microring with an intrinsic quality factor of 3.2×106. The microring adopts a pedestal structure, which allows overcoupling with 700 nm gap size and facilitates the fabrication process. A phase shift for broadband signals from 4 to 25 GHz is demonstrated by employing the thermo-optic effect and the separate carrier tuning technique. A phase tuning range of 0°-332° is recorded with a 3 dB radio frequency (RF) power variation and 48 mW optical power consumption. In addition, AlN exhibits intrinsic second-order optical nonlinearity. Thus, our work presents a novel platform with a low propagation loss and the capability of electro-optic modulation for applications in integrated microwave photonics.

  5. Thermally controlled femtosecond pulse shaping using metasurface based optical filters

    NASA Astrophysics Data System (ADS)

    Rahimi, Eesa; Şendur, Kürşat

    2018-02-01

    Shaping of the temporal distribution of the ultrashort pulses, compensation of pulse deformations due to phase shift in transmission and amplification are of interest in various optical applications. To address these problems, in this study, we have demonstrated an ultra-thin reconfigurable localized surface plasmon (LSP) band-stop optical filter driven by insulator-metal phase transition of vanadium dioxide. A Joule heating mechanism is proposed to control the thermal phase transition of the material. The resulting permittivity variation of vanadium dioxide tailors spectral response of the transmitted pulse from the stack. Depending on how the pulse's spectrum is located with respect to the resonance of the band-stop filter, the thin film stack can dynamically compress/expand the output pulse span up to 20% or shift its phase up to 360°. Multi-stacked filters have shown the ability to dynamically compensate input carrier frequency shifts and pulse span variations besides their higher span expansion rates.

  6. Large local lattice expansion in graphene adlayers grown on copper

    NASA Astrophysics Data System (ADS)

    Chen, Chaoyu; Avila, José; Arezki, Hakim; Nguyen, Van Luan; Shen, Jiahong; Mucha-Kruczyński, Marcin; Yao, Fei; Boutchich, Mohamed; Chen, Yue; Lee, Young Hee; Asensio, Maria C.

    2018-05-01

    Variations of the lattice parameter can significantly change the properties of a material, and, in particular, its electronic behaviour. In the case of graphene, however, variations of the lattice constant with respect to graphite have been limited to less than 2.5% due to its well-established high in-plane stiffness. Here, through systematic electronic and lattice structure studies, we report regions where the lattice constant of graphene monolayers grown on copper by chemical vapour deposition increases up to 7.5% of its relaxed value. Density functional theory calculations confirm that this expanded phase is energetically metastable and driven by the enhanced interaction between the substrate and the graphene adlayer. We also prove that this phase possesses distinctive chemical and electronic properties. The inherent phase complexity of graphene grown on copper foils revealed in this study may inspire the investigation of possible metastable phases in other seemingly simple heterostructure systems.

  7. The optimization of self-phased arrays for diurnal motion tracking of synchronous satellites

    NASA Technical Reports Server (NTRS)

    Theobold, D. M.; Hodge, D. B.

    1977-01-01

    The diurnal motion of a synchronous satellite necessitates mechanical tracking when a large aperture, high gain antenna is employed at the earth terminal. An alternative solution to this tracking problem is to use a self phased array consisting of a number of fixed pointed elements, each with moderate directivity. Non-mechanical tracking and adequate directive gain are achieved electronically by phase coherent summing of the element outputs. The element beamwidths provide overlapping area coverage of the satellite motion but introduce a diurnal variation into the array gain. The optimum element beamwidth and pointing direction of these elements can be obtained under the condition that the array gain is maximized simultaneously with the minimization of the diurnal variation.

  8. Variational transition state theory: theoretical framework and recent developments.

    PubMed

    Bao, Junwei Lucas; Truhlar, Donald G

    2017-12-11

    This article reviews the fundamentals of variational transition state theory (VTST), its recent theoretical development, and some modern applications. The theoretical methods reviewed here include multidimensional quantum mechanical tunneling, multistructural VTST (MS-VTST), multi-path VTST (MP-VTST), both reaction-path VTST (RP-VTST) and variable reaction coordinate VTST (VRC-VTST), system-specific quantum Rice-Ramsperger-Kassel theory (SS-QRRK) for predicting pressure-dependent rate constants, and VTST in the solid phase, liquid phase, and enzymes. We also provide some perspectives regarding the general applicability of VTST.

  9. Reflection-induced linear polarization rotation and phase modulation between orthogonal waves for refractive index variation measurement.

    PubMed

    Twu, Ruey-Ching; Wang, Jhao-Sheng

    2016-04-01

    An optical phase interrogation is proposed to study reflection-induced linear polarization rotation in a common-path homodyne interferometer. This optical methodology can also be applied to the measurement of the refractive index variation of a liquid solution. The performance of the refractive index sensing structure is discussed theoretically, and the experimental results demonstrated a very good ability based on the proposed schemes. Compared with a conventional common-path heterodyne interferometer, the proposed homodyne interferometer with only a single channel reduced the usage of optic elements.

  10. Background Characterization and Discrimination in the Final Analysis of the CDMS II Phase of the Cryogenic Dark Matter Search

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fritts, Matthew C.

    The Cryogenic Dark Matter Search (CDMS) is designed to detectWeakly-Interacting Massive Particles (WIMPs) in the Milky Way halo. The phase known as CDMS II was performed in the Soudan Underground Laboratory. The final set of CDMS II data, collected in 2007-8 and referred to as Runs 125-8, represents the largest exposure to date for the experiment. We seek collisions between WIMPs and atomic nuclei in disk-shaped germanium and silicon detectors. A key design feature is to keep the rate of collisions from known particles producing WIMP-like signals very small. The largest category of such background is interactions with electrons inmore » the detectors that occur very close to one of the faces of the detector. The next largest category is collisions between energetic neutrons that bypass the experimental shielding and nuclei in the detectors. Analytical efforts to discriminate these backgrounds and to estimate the rate at which such discrimination fails have been refined and improved throughout each phase of CDMS. Next-generation detectors for future phases of CDMS require testing at cryogenic test facilities. One such facility was developed at the University of Minnesota in 2007 and has been used continuously since then to test detectors for the next phase of the experiment, known as SuperCDMS.« less

  11. The initial value problem in Lagrangian drift kinetic theory

    NASA Astrophysics Data System (ADS)

    Burby, J. W.

    2016-06-01

    > Existing high-order variational drift kinetic theories contain unphysical rapidly varying modes that are not seen at low orders. These unphysical modes, which may be rapidly oscillating, damped or growing, are ushered in by a failure of conventional high-order drift kinetic theory to preserve the structure of its parent model's initial value problem. In short, the (infinite dimensional) system phase space is unphysically enlarged in conventional high-order variational drift kinetic theory. I present an alternative, `renormalized' variational approach to drift kinetic theory that manifestly respects the parent model's initial value problem. The basic philosophy underlying this alternate approach is that high-order drift kinetic theory ought to be derived by truncating the all-orders system phase-space Lagrangian instead of the usual `field particle' Lagrangian. For the sake of clarity, this story is told first through the lens of a finite-dimensional toy model of high-order variational drift kinetics; the analogous full-on drift kinetic story is discussed subsequently. The renormalized drift kinetic system, while variational and just as formally accurate as conventional formulations, does not support the troublesome rapidly varying modes.

  12. Direct estimation of tidally induced Earth rotation variations observed by VLBI

    NASA Astrophysics Data System (ADS)

    Englich, S.; Heinkelmann, R.; BOHM, J.; Schuh, H.

    2009-09-01

    The subject of our study is the investigation of periodical variations induced by solid Earth tides and ocean tides in Earth rotation parameters (ERP: polar motion, UT1)observed by VLBI. There are two strategies to determine the amplitudes and phases of Earth rotation variations from observations of space geodetic techniques. The common way is to derive time series of Earth rotation parameters first and to estimate amplitudes and phases in a second step. Results obtained by this means were shown in previous studies for zonal tidal variations (Englich et al.; 2008a) and variations caused by ocean tides (Englich et al.; 2008b). The alternative method is to estimate the tidal parameters directly within the VLBI data analysis procedure together with other parameters such as station coordinates, tropospheric delays, clocks etc. The purpose of this work was the application of this direct method to a combined VLBI data analysis using the software packages OCCAM (Version 6.1, Gauss-Markov-Model) and DOGSCS (Gerstl et al.; 2001). The theoretical basis and the preparatory steps for the implementation of this approach are presented here.

  13. Obtaining phase velocity of turbulent boundary layer pressure fluctuations at high subsonic Mach number from wind tunnel data affected by strong background noise

    NASA Astrophysics Data System (ADS)

    Haxter, Stefan; Brouwer, Jens; Sesterhenn, Jörn; Spehr, Carsten

    2017-08-01

    Boundary layer measurements at high subsonic Mach number are evaluated in order to obtain the dominant phase velocities of boundary layer pressure fluctuations. The measurements were performed in a transonic wind tunnel which had a very strong background noise. The phase velocity was taken from phase inclination and from the convective peak in one- and two-dimensional wavenumber spectra. An approach was introduced to remove the acoustic noise from the data by applying a method based on CLEAN-SC on the two-dimensional spectra, thereby increasing the frequency range where information about the boundary layer was retrievable. A comparison with prediction models showed some discrepancies in the low-frequency range. Therefore, pressure data from a DNS calculation was used to substantiate the results of the analysis in this frequency range. Using the measured data, the DNS results and a review of the models used for comparison it was found that the phase velocity decreases at low frequencies.

  14. Functional genomics of physiological plasticity and local adaptation in killifish.

    PubMed

    Whitehead, Andrew; Galvez, Fernando; Zhang, Shujun; Williams, Larissa M; Oleksiak, Marjorie F

    2011-01-01

    Evolutionary solutions to the physiological challenges of life in highly variable habitats can span the continuum from evolution of a cosmopolitan plastic phenotype to the evolution of locally adapted phenotypes. Killifish (Fundulus sp.) have evolved both highly plastic and locally adapted phenotypes within different selective contexts, providing a comparative system in which to explore the genomic underpinnings of physiological plasticity and adaptive variation. Importantly, extensive variation exists among populations and species for tolerance to a variety of stressors, and we exploit this variation in comparative studies to yield insights into the genomic basis of evolved phenotypic variation. Notably, species of Fundulus occupy the continuum of osmotic habitats from freshwater to marine and populations within Fundulus heteroclitus span far greater variation in pollution tolerance than across all species of fish. Here, we explore how transcriptome regulation underpins extreme physiological plasticity on osmotic shock and how genomic and transcriptomic variation is associated with locally evolved pollution tolerance. We show that F. heteroclitus quickly acclimate to extreme osmotic shock by mounting a dramatic rapid transcriptomic response including an early crisis control phase followed by a tissue remodeling phase involving many regulatory pathways. We also show that convergent evolution of locally adapted pollution tolerance involves complex patterns of gene expression and genome sequence variation, which is confounded with body-weight dependence for some genes. Similarly, exploiting the natural phenotypic variation associated with other established and emerging model organisms is likely to greatly accelerate the pace of discovery of the genomic basis of phenotypic variation.

  15. Functional Genomics of Physiological Plasticity and Local Adaptation in Killifish

    PubMed Central

    Galvez, Fernando; Zhang, Shujun; Williams, Larissa M.; Oleksiak, Marjorie F.

    2011-01-01

    Evolutionary solutions to the physiological challenges of life in highly variable habitats can span the continuum from evolution of a cosmopolitan plastic phenotype to the evolution of locally adapted phenotypes. Killifish (Fundulus sp.) have evolved both highly plastic and locally adapted phenotypes within different selective contexts, providing a comparative system in which to explore the genomic underpinnings of physiological plasticity and adaptive variation. Importantly, extensive variation exists among populations and species for tolerance to a variety of stressors, and we exploit this variation in comparative studies to yield insights into the genomic basis of evolved phenotypic variation. Notably, species of Fundulus occupy the continuum of osmotic habitats from freshwater to marine and populations within Fundulus heteroclitus span far greater variation in pollution tolerance than across all species of fish. Here, we explore how transcriptome regulation underpins extreme physiological plasticity on osmotic shock and how genomic and transcriptomic variation is associated with locally evolved pollution tolerance. We show that F. heteroclitus quickly acclimate to extreme osmotic shock by mounting a dramatic rapid transcriptomic response including an early crisis control phase followed by a tissue remodeling phase involving many regulatory pathways. We also show that convergent evolution of locally adapted pollution tolerance involves complex patterns of gene expression and genome sequence variation, which is confounded with body-weight dependence for some genes. Similarly, exploiting the natural phenotypic variation associated with other established and emerging model organisms is likely to greatly accelerate the pace of discovery of the genomic basis of phenotypic variation. PMID:20581107

  16. Second order phase transition in thermodynamic geometry and holographic superconductivity in low-energy stringy black holes

    NASA Astrophysics Data System (ADS)

    Rizwan, C. L. Ahmed; Vaid, Deepak

    2018-05-01

    We study holographic superconductivity in low-energy stringy Garfinkle-Horowitz-Strominger (GHS) dilaton black hole background. We finds that superconducting properties are much similar to s-wave superconductors. We show that the second-order phase transition indicated from thermodynamic geometry is not different from superconducting phase transition.

  17. Phase diagram of a symmetric electron-hole bilayer system: a variational Monte Carlo study.

    PubMed

    Sharma, Rajesh O; Saini, L K; Bahuguna, Bhagwati Prasad

    2018-05-10

    We study the phase diagram of a symmetric electron-hole bilayer system at absolute zero temperature and in zero magnetic field within the quantum Monte Carlo approach. In particular, we conduct variational Monte Carlo simulations for various phases, i.e. the paramagnetic fluid phase, the ferromagnetic fluid phase, the anti-ferromagnetic Wigner crystal phase, the ferromagnetic Wigner crystal phase and the excitonic phase, to estimate the ground-state energy at different values of in-layer density and inter-layer spacing. Slater-Jastrow style trial wave functions, with single-particle orbitals appropriate for different phases, are used to construct the phase diagram in the (r s , d) plane by finding the relative stability of trial wave functions. At very small layer separations, we find that the fluid phases are stable, with the paramagnetic fluid phase being particularly stable at [Formula: see text] and the ferromagnetic fluid phase being particularly stable at [Formula: see text]. As the layer spacing increases, we first find that there is a phase transition from the ferromagnetic fluid phase to the ferromagnetic Wigner crystal phase when d reaches 0.4 a.u. at r s   =  20, and before there is a return to the ferromagnetic fluid phase when d approaches 1 a.u. However, for r s   <  20 and [Formula: see text] a.u., the excitonic phase is found to be stable. We do not find that the anti-ferromagnetic Wigner crystal is stable over the considered range of r s and d. We also find that as r s increases, the critical layer separations for Wigner crystallization increase.

  18. Day-to-day variations in the amplitude of the soil temperature cycle and impact on adult eclosion timing of the onion fly.

    PubMed

    Tanaka, Kazuhiro; Watari, Yasuhiko

    2017-06-01

    The onion fly Delia antiqua advances its eclosion timing with decreasing temperature amplitude to compensate for a depth-dependent phase delay of the zeitgeber. To elucidate whether or not naturally occurring day-to-day variations in the amplitude of soil temperature cycle disturb this compensatory response, we monitored daily variations in the temperature amplitude in natural soils and evaluated the impact on adult eclosion timing. Our results indicated that both median and variance of the soil temperature amplitude become smaller as depth increases. Insertion of a larger temperature fluctuation into the thermoperiod with smaller temperature amplitude induced a stronger phase delay, while insertion of a smaller temperature fluctuation into the thermoperiod with larger temperature amplitude had a weaker phase-advancing effect. It is therefore expected that larger diurnal temperature fluctuations disturb the compensatory response, particularly if they occur at deeper locations, while smaller temperature fluctuations do so only at shallower locations. Under natural conditions, however, the probability of occurrence of smaller or larger temperature fluctuations in shallower or deeper soils, respectively, is relatively small. Thus, naturally occurring day-to-day variations in the temperature amplitude rarely disturb the compensatory response, thereby having a subtle or negligible impact on adult eclosion timing.

  19. Ureaplasma antigenic variation beyond MBA phase variation: DNA inversions generating chimeric structures and switching in expression of the MBA N-terminal paralogue UU172

    PubMed Central

    Zimmerman, Carl-Ulrich R; Rosengarten, Renate; Spergser, Joachim

    2011-01-01

    Phase variation of the major ureaplasma surface membrane protein, the multiple-banded antigen (MBA), with its counterpart, the UU376 protein, was recently discussed as a result of DNA inversion occurring at specific inverted repeats. Two similar inverted repeats to the ones within the mba locus were found in the genome of Ureaplasma parvum serovar 3; one within the MBA N-terminal paralogue UU172 and another in the adjacent intergenic spacer region. In this report, we demonstrate on both genomic and protein level that DNA inversion at these inverted repeats leads to alternating expression between UU172 and the neighbouring conserved hypothetical ORF UU171. Sequence analysis of this phase-variable ‘UU172 element’ from both U. parvum and U. urealyticum strains revealed that it is highly conserved among both species and that it also includes the orthologue of UU144. A third inverted repeat region in UU144 is proposed to serve as an additional potential inversion site from which chimeric genes can evolve. Our results indicate that site-specific recombination events in the genome of U. parvum serovar 3 are dynamic and frequent, leading to a broad spectrum of antigenic variation by which the organism may evade host immune responses. PMID:21255110

  20. Raman Spectroscopy and Microphysics of Single PSC Precursor Particles Suspended in a Quadrupole Trap

    NASA Astrophysics Data System (ADS)

    Sonnenfroh, D. M.; Hunter, A. J.; Rawlins, W. T.

    2001-12-01

    Polar stratospheric clouds (PSCs) consist primarily of solid nitric acid trihydrate (NAT) particles, which are thought to nucleate via HNO3 uptake on background sulfuric acid particles at temperatures below 195 K. The mechanism for this process is uncertain, and depends on whether the sulfuric acid particles are solid or liquid at these temperatures. Previous results from laboratory and field measurements are mixed; our previous single-particle laboratory experiments showed that binary H2SO4/H2O particles at stratospheric compositions are essentially metastable in the liquid phase when cooled to PSC temperatures. Currently, we are investigating the detailed microphysics of binary (H2SO4/H2O) and ternary (HNO3/H2SO4/H2O) single particles suspended in an electrodynamic levitator, using optical elastic scattering and Raman spectroscopy to observe changes in phase and composition. Single-particle Raman spectra for supercooled binary particles exhibit spectral distributions which alter markedly with decreasing temperature down to 190 K. The variations signify increasing dissociation of HSO4(-) to SO4(-2) with decreasing temperature, consistent with measurements for bulk solutions. Upon gradual warming of supercooled liquid binary particles, some of them freeze briefly in a narrow "window" of the phase diagram, near 210 K and 60 weight per cent H2SO4. We will discuss the Raman spectroscopy and microphysical behavior of the liquid and frozen particles for both the binary and ternary systems. This research was supported by the NASA Atmospheric Effects of Aviation Program.

  1. Treatment Strategies for Paradoxical Hypertension Following Surgical Correction of Coarctation of the Aorta in Children

    PubMed Central

    Zwijsen, Eline G.

    2017-01-01

    Background: Paradoxical hypertension after repair of coarctation of the aorta is a well-known phenomenon. The pathogenesis involves the activation of the sympathetic nervous system (first phase) and renin–angiotensin system (second phase). Only a limited number of different treatment strategies have been published in the literature, without any comparative studies. Methods: Our aim was to describe the current international practice variation surrounding pharmacological treatment currently being employed to treat paradoxical hypertension following the repair of coarctation of the aorta in children. We performed an online survey among 197 members of the Pediatric Cardiac Intensive Care Society. We also conducted a systematic review of the literature regarding the treatment of paradoxical hypertension. Results: Eighty-eight people (45%), from 62 different centers, responded and answered the questions regarding blood pressure control. Nitroprusside is the first drug of choice for initial blood pressure control in 66% of respondents, esmolol in 11%, labetalol in 11%, and angiotensin-converting enzyme inhibitors (ACEIs) are used by 3% of respondents. For oral blood pressure control after discharge from the pediatric intensive care unit, 75% of respondents use ACEIs, 18% use labetalol, and 12% use other beta-blockers (propranolol, carvedilol, atenolol, metoprolol). The systematic review identified 14 articles reporting pharmacological treatment of direct postoperative hypertension following coarctation repair. Conclusion: There is wide practice variability, due to the lack of sufficient compelling evidence. The majority (66%) of caregivers use nitroprusside to control blood pressure in the acute postoperative phase. The ACEIs are the drug of choice for chronic blood pressure control. PMID:28520538

  2. Intracyclic Velocity Variation of the Center of Mass and Hip in Breaststroke Swimming With Maximal Intensity.

    PubMed

    Gourgoulis, Vassilios; Koulexidis, Stylianos; Gketzenis, Panagiotis; Tzouras, Grigoris

    2018-03-01

    Gourgoulis, V, Koulexidis, S, Gketzenis, P, and Tzouras, G. Intra-cyclic velocity variation of the center of mass and hip in breaststroke swimming with maximal intensity. J Strength Cond Res 32(3): 830-840, 2018-The aim of the study was to compare the center of mass (CM) and hip (HIP) intracyclic velocity variation in breaststroke swimming using 3-dimensional kinematic analysis. Nine male breaststrokes, of moderate performance level, swam 25-m breaststroke with maximal intensity, and their movements were recorded, both under and above the water surface, using 8 digital cameras. Their CM and HIP velocities and their intracyclic variations were estimated after manual digitization of 28 selected points on the body in a complete arm and leg breaststroke cycle. Paired sample t-tests or Wilcoxon tests, when the assumption of normality was broken, were used for statistical analyses. In both, CM and HIP velocity-time curves, the results revealed a similar pattern of 2 clear peaks associated with the leg and arm propulsive phases and 2 minimal velocities that corresponded to the arm and leg recovery phase and the lag time between the leg and arm propulsive phases, respectively. However, despite this similar general pattern, the HIP minimum resultant velocity was significantly lower, whereas its maximal value was significantly greater, than the corresponding CM values. Consequently, the HIP intracyclic swimming velocity fluctuation significantly overestimates the actual variation of the swimmer's velocity in breaststroke swimming.

  3. Carryover effects and climatic conditions influence the postfledging survival of greater sage-grouse

    USGS Publications Warehouse

    Blomberg, Erik J.; Sedinger, James S.; Gibson, Daniel; Coates, Peter S.; Casazza, Michael L.

    2014-01-01

    Prebreeding survival is an important life history component that affects both parental fitness and population persistence. In birds, prebreeding can be separated into pre- and postfledging periods; carryover effects from the prefledging period may influence postfledging survival. We investigated effects of body condition at fledging, and climatic variation, on postfledging survival of radio-marked greater sage-grouse (Centrocercus urophasianus) in the Great Basin Desert of the western United States. We hypothesized that body condition would influence postfledging survival as a carryover effect from the prefledging period, and we predicted that climatic variation may mediate this carryover effect or, alternatively, would act directly on survival during the postfledging period. Individual body condition had a strong positive effect on postfledging survival of juvenile females, suggesting carryover effects from the prefledging period. Females in the upper 25th percentile of body condition scores had a postfledging survival probability more than twice that (Φ = 0.51 ± 0.06 SE) of females in the bottom 25th percentile (Φ = 0.21 ± 0.05 SE). A similar effect could not be detected for males. We also found evidence for temperature and precipitation effects on monthly survival rates of both sexes. After controlling for site-level variation, postfledging survival was nearly twice as great following the coolest and wettest growing season (Φ = 0.77 ± 0.05 SE) compared with the hottest and driest growing season (Φ = 0.39 ± 0.05 SE). We found no relationships between individual body condition and temperature or precipitation, suggesting that carryover effects operated independently of background climatic variation. The temperature and precipitation effects we observed likely produced a direct effect on mortality risk during the postfledging period. Conservation actions that focus on improving prefledging habitat for sage-grouse may have indirect benefits to survival during postfledging, due to carryover effects between the two life phases.

  4. Ambient neutrons of natural origin

    NASA Astrophysics Data System (ADS)

    Gusev, Anatoly; Martin, Inacio; Shkevov, Rumen; Alves, Mauro

    2016-07-01

    The laboratory of environmental radiation of ITA (São José dos Campos, 23°11'11″S, 45°52'43″W, 650 MAMSL) performs simultaneous monitoring of a natural radiation background and meteorological parameters. Neutron flux in the energy range of 0.02 eV - 10 MeV is registered with two sets of proportional ^{3}He tubes placed into cylindrical paraffin thermalizers: an {bf outdoor detector }of 250 cm² area and {bf indoor detector }of 70 cm² area located on the second floor of a concrete building. The counter efficiency for thermal neutrons is 80%. The characteristics of the observed flux variation are quite different from those inherent to the neutrons of the cosmic ray origin. {bf Four types of the outdoor flux variations }are observed: 1) {bf seasonal }with a maxima in wet seasons; 2) {bf diurnal }with maximum at about 6 h local time and an amplitude up to several dozens; 3) {bf abrupt transient} ( 1 min) increases with magnitudes up to two orders higher than the mean daily flux; 4) short (several days) {bf quasi-periodic enhancements }with amplitudes up to several times higher than the mean daily flux. A large variation of the outdoor flux and its phase synchronism with that of the radon decay products means with a high probability their common origin. An apparent source of the neutrons observed is nuclear reactions of decay α-particles with the ground matter. In this case the dynamics of the outdoor flux variations of the first two types is controlled by those of the meteorological parameters in the locality. The third type events correlate with lightning strokes in the vicinity (<200 m) of the detector. The more rare fourth type correlate neither with geomagnetic disturbances nor with meteorological phenomena and are probably a result of natural radon release from the Earth's crust triggered by minor seismological activity. The indoor flux is quite stable with a possible weak maximum at16 h not exceeding 0.1.

  5. Water-flow variation and pharmacoepidemiology of tetracycline hydrochloride administration via drinking water in swine finishing farms.

    PubMed

    Dorr, Paul M; Nemechek, Megan S; Scheidt, Alan B; Baynes, Ronald E; Gebreyes, Wondwossen A; Almond, Glen W

    2009-08-01

    To evaluate variation of drinking-water flow rates in swine finishing barns and the relationship between drinker flow rate and plasma tetracycline concentrations in pigs housed in different pens. Cross-sectional (phase 1) and cohort (phase 2) studies. 13 swine finishing farms (100 barns with 7,122 drinkers) in phase 1 and 100 finishing-stage pigs on 2 finishing farms (1 barn/farm) in phase 2. In phase 1, farms were evaluated for water-flow variation, taking into account the following variables: position of drinkers within the barn, type of drinker (swing or mounted), pig medication status, existence of designated sick pen, and existence of leakage from the waterline. In phase 2, blood samples were collected from 50 pigs/barn (40 healthy and 10 sick pigs) in 2 farms at 0, 4, 8, 24, 48, and 72 hours after initiation of water-administered tetracycline HCl (estimated dosage, 22 mg/kg [10 mg/lb]). Plasma tetracycline concentrations were measured via ultraperformance liquid chromatography. Mean farm drinker flow rates ranged from 1.44 to 2.77 L/min. Significant differences in flow rates existed according to drinker type and whether tetracycline was included in the water. Mean drinker flow rates and plasma tetracycline concentrations were significantly different between the 2 farms but were not different between healthy and sick pigs. The plasma tetracycline concentrations were typically < 0.3 microg/mL. Many factors affected drinker flow rates and therefore the amount of medication pigs might have received. Medication of pigs with tetracycline through water as performed in this study had questionable therapeutic value.

  6. Phase Evolution of the Crab Pulsar between Radio and X-Ray

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yan, L. L.; Ge, M. Y.; Zheng, S. J.

    We study the X-ray phases of the Crab pulsar utilizing the 11-year observations from the Rossi X-ray Timing Explorer , 6-year radio observations from Nanshan Telescope, and the ephemeris from Jodrell Bank Observatory. It is found that the X-ray phases in different energy bands and the radio phases from the Nanshan Telescope show similar behaviors, including long-time evolution and short-time variations. Such strong correlations between the X-ray and radio phases imply that the radio and X-ray timing noises are both generated from the pulsar spin that cannot be well described by the the monthly ephemeris from the Jodrell Bank observatory.more » When using the Nanshan phases as references to study the X-ray timing noise, it has a significantly smaller variation amplitude and shows no long-time evolution, with a change rate of (−1.1 ± 1.1) × 10{sup −7} periods per day. These results show that the distance of the X-ray and radio emission regions on the Crab pulsar has no detectable secular change, and it is unlikely that the timing noises resulted from any unique physical processes in the radio or X-ray emitting regions. The similar behaviors of the X-ray and radio timing noises also imply that the variation of the interstellar medium is not the origin of the Crab pulsar’s timing noises, which is consistent with the results obtained from the multi-frequency radio observations of PSR B1540−06.« less

  7. Variation in motor output and motor performance in a centrally generated motor pattern

    PubMed Central

    Norris, Brian J.; Doloc-Mihu, Anca; Calabrese, Ronald L.

    2014-01-01

    Central pattern generators (CPGs) produce motor patterns that ultimately drive motor outputs. We studied how functional motor performance is achieved, specifically, whether the variation seen in motor patterns is reflected in motor performance and whether fictive motor patterns differ from those in vivo. We used the leech heartbeat system in which a bilaterally symmetrical CPG coordinates segmental heart motor neurons and two segmented heart tubes into two mutually exclusive coordination modes: rear-to-front peristaltic on one side and nearly synchronous on the other, with regular side-to-side switches. We assessed individual variability of the motor pattern and the beat pattern in vivo. To quantify the beat pattern we imaged intact adults. To quantify the phase relations between motor neurons and heart constrictions we recorded extracellularly from two heart motor neurons and movement from the corresponding heart segments in minimally dissected leeches. Variation in the motor pattern was reflected in motor performance only in the peristaltic mode, where larger intersegmental phase differences in the motor neurons resulted in larger phase differences between heart constrictions. Fictive motor patterns differed from those in vivo only in the synchronous mode, where intersegmental phase differences in vivo had a larger front-to-rear bias and were more constrained. Additionally, load-influenced constriction timing might explain the amplification of the phase differences between heart segments in the peristaltic mode and the higher variability in motor output due to body shape assumed in this soft-bodied animal. The motor pattern determines the beat pattern, peristaltic or synchronous, but heart mechanics influence the phase relations achieved. PMID:24717348

  8. Monsoon rainfall over India in June and link with northwest tropical pacific - June ISMR and link with northwest tropical pacific

    NASA Astrophysics Data System (ADS)

    Surendran, Sajani; Gadgil, Sulochana; Rajendran, Kavirajan; Varghese, Stella Jes; Kitoh, Akio

    2018-03-01

    Recent years have witnessed large interannual variation of all-India rainfall (AIR) in June, with intermittent large deficits and excesses. Variability of June AIR is found to have the strongest link with variation of rainfall over northwest tropical Pacific (NWTP), with AIR deficit (excess) associated with enhancement (suppression) of NWTP rainfall. This association is investigated using high-resolution Meteorological Research Institute model which shows high skill in simulating important features of Asian summer monsoon, its variability and the inverse relationship between NWTP rainfall and AIR. Analysis of the variation of NWTP rainfall shows that it is associated with a change in the latitudinal position of subtropical westerly jet over the region stretching from West of Tibetan Plateau (WTP) to NWTP and the phase of Rossby wave steered in it with centres over NWTP and WTP. In years with large rainfall excess/deficit, the strong link between AIR and NWTP rainfall exists through differences in Rossby wave phase steered in the jet. The positive phase of the WTP-NWTP pattern, with troughs over WTP and west of NWTP, tends to be associated with increased rainfall over NWTP and decreased AIR. This scenario is reversed in the opposite phase. Thus, the teleconnection between NWTP rainfall and AIR is a manifestation of the difference in the phase of Rossby wave between excess and deficit years, with centres over WTP and NWTP. This brings out the importance of prediction of phase of Rossby waves over WTP and NWTP in advance, for prediction of June rainfall over India.

  9. Dynamical influences on the moment of inertia tensor from lateral viscosity variations inferred from seismic tomographic models

    NASA Technical Reports Server (NTRS)

    Zhang, Shuxia; Yuen, David A.

    1994-01-01

    We have investigated the influences of lateral variations of viscosity on the moment of inertia tensor from viscous flows due to the density anomalies in the mantle inferred from seismic tomographic models. The scaling relations between the density and the seismic anomalies is taken as either a constant or a function increasing with depth in accord with the recent high-pressure experimental studies. The viscosity is taken as an exponential function of the 3D density anomaly. In models with an isoviscous background, the effects on the perturbed moment of inertia tensor from the lateral viscosity variations are smaller than those due to variations in the radial viscosity profiles. In mantle models with a background viscosity increasing with depth, the influences of the lateral viscosity variations are significant. The most striking feature in the latter case is that the two off-diagonal elements delta I(sub xz) and delta I(sub yz) in the inertia tensor exhibit greatest sensitivity to lateral variations of the viscosity. While the other elements of the inertia change by only about a few tens of percent in the range of lateral viscosity contrast considered (less than 300), delta I(sub xz) and delta I(sub yz) can vary up to 40 times even with a change in sign, depending on the radial viscosity stratification and the location of the strongest lateral variations. The increase in the velocity-density scaling relation with depth can reduce the influences of the lateral viscosity variations, but it does not change the overall sensitive nature of delta I(sub xz) and delta I(sub yz). This study demonstrates clearly that the lateral viscosity variations, especially in the upper mantle, must be considered in the determination of long-term polar wander, since the variations in the delta I(sub xz) and delta I(sub yz) terms are directly responsible for exciting rotational movements.

  10. Spatial Variation in Background Mortality among Dominant Coral Taxa on Australia's Great Barrier Reef

    PubMed Central

    Pisapia, Chiara; Pratchett, Morgan S.

    2014-01-01

    Even in the absence of major disturbances (e.g., cyclones, bleaching), corals are consistently subject to high levels of background mortality, which undermines individual fitness and resilience of coral colonies. Partial mortality may impact coral response to climate change by reducing colony ability to recover between major acute stressors. This study quantified proportion of injured versus uninjured colonies (the prevalence of injuries) and instantaneous measures of areal extent of injuries across individual colonies (the severity of injuries), in four common coral species along the Great Barrier Reef in Australia: massive Porites, encrusting Montipora, Acropora hyacinthus and Pocillopora damicornis. A total of 2,276 adult colonies were surveyed three latitudinal sectors, nine reefs and 27 sites along 1000 km2 on the Great Barrier Reef. The prevalence of injuries was very high, especially for Porites spp (91%) and Montipora encrusting (85%) and varied significantly, but most lay at small spatial scales (e.g., among colonies positioned <10-m apart). Similarly, severity of background partial mortality was surprisingly high (between 5% and 21%) but varied greatly among colonies within the same site and habitat. This study suggests that intraspecific variation in partial mortality between adjacent colonies may be more important than variation between colonies in different latitudinal sectors or reefs. Differences in the prevalence and severity of background partial mortality have significant ramifications for coral capacity to cope with increasing acute disturbances, such as climate-induced coral bleaching. These data are important for understanding coral responses to increasing stressors, and in particular for predicting their capacity to recover between subsequent disturbances. PMID:24959921

  11. Spatial variation in background mortality among dominant coral taxa on Australia's Great Barrier Reef.

    PubMed

    Pisapia, Chiara; Pratchett, Morgan S

    2014-01-01

    Even in the absence of major disturbances (e.g., cyclones, bleaching), corals are consistently subject to high levels of background mortality, which undermines individual fitness and resilience of coral colonies. Partial mortality may impact coral response to climate change by reducing colony ability to recover between major acute stressors. This study quantified proportion of injured versus uninjured colonies (the prevalence of injuries) and instantaneous measures of areal extent of injuries across individual colonies (the severity of injuries), in four common coral species along the Great Barrier Reef in Australia: massive Porites, encrusting Montipora, Acropora hyacinthus and Pocillopora damicornis. A total of 2,276 adult colonies were surveyed three latitudinal sectors, nine reefs and 27 sites along 1000 km2 on the Great Barrier Reef. The prevalence of injuries was very high, especially for Porites spp (91%) and Montipora encrusting (85%) and varied significantly, but most lay at small spatial scales (e.g., among colonies positioned <10-m apart). Similarly, severity of background partial mortality was surprisingly high (between 5% and 21%) but varied greatly among colonies within the same site and habitat. This study suggests that intraspecific variation in partial mortality between adjacent colonies may be more important than variation between colonies in different latitudinal sectors or reefs. Differences in the prevalence and severity of background partial mortality have significant ramifications for coral capacity to cope with increasing acute disturbances, such as climate-induced coral bleaching. These data are important for understanding coral responses to increasing stressors, and in particular for predicting their capacity to recover between subsequent disturbances.

  12. Radon backgrounds in the DEAP-1 liquid-argon-based Dark Matter detector

    NASA Astrophysics Data System (ADS)

    Amaudruz, P.-A.; Batygov, M.; Beltran, B.; Boudjemline, K.; Boulay, M. G.; Cai, B.; Caldwell, T.; Chen, M.; Chouinard, R.; Cleveland, B. T.; Contreras, D.; Dering, K.; Duncan, F.; Ford, R.; Gagnon, R.; Giuliani, F.; Gold, M.; Golovko, V. V.; Gorel, P.; Graham, K.; Grant, D. R.; Hakobyan, R.; Hallin, A. L.; Harvey, P.; Hearns, C.; Jillings, C. J.; Kuźniak, M.; Lawson, I.; Li, O.; Lidgard, J.; Liimatainen, P.; Lippincott, W. H.; Mathew, R.; McDonald, A. B.; McElroy, T.; McFarlane, K.; McKinsey, D.; Muir, A.; Nantais, C.; Nicolics, K.; Nikkel, J.; Noble, T.; O'Dwyer, E.; Olsen, K. S.; Ouellet, C.; Pasuthip, P.; Pollmann, T.; Rau, W.; Retiere, F.; Ronquest, M.; Skensved, P.; Sonley, T.; Tang, J.; Vázquez-Jáuregui, E.; Veloce, L.; Ward, M.

    2015-03-01

    The DEAP-1 7 kg single phase liquid argon scintillation detector was operated underground at SNOLAB in order to test the techniques and measure the backgrounds inherent to single phase detection, in support of the DEAP-3600 Dark Matter detector. Backgrounds in DEAP are controlled through material selection, construction techniques, pulse shape discrimination, and event reconstruction. This report details the analysis of background events observed in three iterations of the DEAP-1 detector, and the measures taken to reduce them. The 222 Rn decay rate in the liquid argon was measured to be between 16 and 26 μBq kg-1. We found that the background spectrum near the region of interest for Dark Matter detection in the DEAP-1 detector can be described considering events from three sources: radon daughters decaying on the surface of the active volume, the expected rate of electromagnetic events misidentified as nuclear recoils due to inefficiencies in the pulse shape discrimination, and leakage of events from outside the fiducial volume due to imperfect position reconstruction. These backgrounds statistically account for all observed events, and they will be strongly reduced in the DEAP-3600 detector due to its higher light yield and simpler geometry.

  13. Phase Fluctuation Enhanced Adaptive Processor

    DTIC Science & Technology

    2000-02-04

    Serial Number Filing Date Inventor 09/498.348 4 February 2000 Ronald A. Wagstaff Jackson A. Mobbs NOTICE The above identified patent...phase angle, as describedin Phase Variations in a Fluctuation Based Processor, Ronald A. Wagstaff and Jacob George, SPIE Vol. 2751, April 1996, pages...16 17 18 19 20 21 22 Docket No.: N.C. 79,518 PATENT APPT TPATT™ Inventor’s Name: Wagstaff , et al APPLICATION 1 have medium phase fluctuations

  14. Pulse Phase Dependence of Low Energy Emission Lines in an X-ray pulsar 4U 1626-67 during its spin-up and spin-down phase

    NASA Astrophysics Data System (ADS)

    Beri, Aru; Paul, Biswajit; Dewangan, Gulab Chand

    2016-07-01

    We will present the results obtained from the new observation of an ultra-compact X-ray binary pulsar 4U 1626-67, carried out with the XMM-Newton observatory. 4U 1626-67, a unique accretion powered pulsar underwent two torque reversals since its discovery in 1977. Pulse phase resolved spectroscopy of this source performed using the data from the XMM-Newton observatory during its spin-down phase revealed the dependence of the emission lines on the pulse phase. O VII emission line at 0.569 keV showed the maximum variation by factor of 4. These variations were interpreted due to warps in the accretion disk (Beri et al. 2015). Radiation pressure induced warping is also believed to be the cause for spin-down. In light of this possible explanation for spin-down torque reversal we expect different line variability during the spin-up phase. We will discuss the implications of the results obtained after performing pulse phase resolved spectroscopy using data from the EPIC-pn during the current spin-up phase. Detailed study of the prominent Neon and Oxygen line complexes with the high resolution Reflection Grating Spectrometer (RGS) on-board XMM-Newton will also be presented.

  15. Seasonal variations in aerosol optical properties over China

    Treesearch

    Yuesi Wang; Jinyuan Xin; Zhanqing Li; Shigong Wang; Pucai Wang; Wei Min Hao; Bryce L. Nordgren; Hongbin Chen; Lili Wang; Yang Sun

    2012-01-01

    Seasonal variations in background aerosol optical depth (AOD) and aerosol type are investigated over various ecosystems in China based upon three years' worth of meteorological data and data collected by the Chinese Sun Hazemeter Network. In most parts of China, AODs are at a maximum in spring or summer and at a minimum in autumn or winter. Minimum values (0.10~0....

  16. Variation in Educational Outcomes and Policies across Countries and of Schools within Countries. CEE DP 117

    ERIC Educational Resources Information Center

    Freeman, Richard B.; Machin, Stephen J.; Viarengo, Martina G.

    2010-01-01

    The motivation for this paper is to increase individuals' understanding of the way in which inequality in educational outcomes and in the relation between measures of backgrounds is related to levels and dispersion of educational performance of young persons. The article thus sheds light on the international variation in the importance of…

  17. Sociolinguistic Variation and Change in British Sign Language Number Signs: Evidence of Leveling?

    ERIC Educational Resources Information Center

    Stamp, Rose; Schembri, Adam; Fenlon, Jordan; Rentelis, Ramas

    2015-01-01

    This article presents findings from the first major study to investigate lexical variation and change in British Sign Language (BSL) number signs. As part of the BSL Corpus Project, number sign variants were elicited from 249 deaf signers from eight sites throughout the UK. Age, school location, and language background were found to be significant…

  18. Modeling patterns of coral bleaching at a remote Central Pacific atoll.

    PubMed

    Williams, Gareth J; Knapp, Ingrid S; Maragos, James E; Davy, Simon K

    2010-09-01

    A mild bleaching event (9.2% prevalence) at Palmyra Atoll occurred in response to the 2009 ENSO, when mean water temperature reached 29.8-30.1 degrees C. Prevalence among both abundant and sparse taxa varied with no clear pattern in susceptibility relating to coral morphology. Seven taxon-specific models showed that turbidity exacerbated while prior exposure to higher background temperatures alleviated bleaching, with these predictors explaining an average 16.3% and 11.5% variation in prevalence patterns, respectively. Positive associations occurred between bleaching prevalence and both immediate temperature during the bleaching event (average 8.4% variation explained) and increased sand cover (average 3.7%). Despite these associations, mean unexplained variation in prevalence equalled 59%. Lower bleaching prevalence in areas experiencing higher background temperatures suggests acclimation to temperature stress among several coral genera, while WWII modifications may still be impacting the reefs via shoreline sediment re-distribution and increased turbidity, exacerbating coral bleaching susceptibility during periods of high temperature stress. Copyright 2010 Elsevier Ltd. All rights reserved.

  19. General technique for measurement of refractive index variations

    NASA Technical Reports Server (NTRS)

    1970-01-01

    Time variation of amplitude and phase fluctuations, impressed on waves propagating through a medium which has a randomly varying refractive index, is used to examine isolated regions along the line of propagation. Technique employs only one antenna at each end of the line.

  20. Highway maintenance concept vehicle final report : phase four.

    DOT National Transportation Integrated Search

    2002-06-01

    This report documents Phase IV of the Highway Maintenance Concept Vehicle (HMCV) project, : a pooled fund study sponsored by the Departments of Transportation of Iowa, Pennsylvania, and : Wisconsin. This report provides the background, including a br...

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