PALEOBIOLOGICAL APPLICATIONS OF THREE-DIMENSIONAL BIOMETRY ON LARGER BENTHIC FORAMINIFERA: A NEW ROUTE OF DISCOVERIES.

PubMed

Briguglio, Antonino; Hohenegger, Johann; Less, György

2013-01-01

Four specimens of larger benthic foraminifera (the Recent Palaeonummulites venosus and Operculina ammonoides , and the phylogenetically related Paleogene Nummulites fabianii and N. fichteli ) were investigated by X-ray tomography. The resulting three-dimensional measurements enabled a comprehensive, quantitative study of shell morphology to interpret cell growth without specific shell preparation and/or destruction. After segmentation and extraction of all scanned lumina, the following characters were measured on all chambers of each specimen: chamber volume, septal distance, chamber height, and chamber width. The sequence of chamber lumina follows either a logistic function ( Palaeonummulites , Operculina ), where the deceleration in growth rate of the latest chambers could mark the onset of reproduction, or it can be modeled by a series of stepwise functions with differing constants ( Nummulites ). Variations around the growth model are either periodic, following external cycles, or random as expressed by abrupt deviations. Therefore, they may reflect the response of the cell to environmental changes in terms of cyclic changes (e.g., seasonality) or single events (e.g., predator attack). Correlations between chamber volume and the other chamber parameters show that septal distance always matches the sequence in chamber volume and can therefore be used as a proxy for environmental analyses in both growth models. Chamber height and width often remain constant around their function and rarely deviate drastically to accommodate the needed lumen for retaining test size and shape. Chamber width may vary according to chamber volume in involute specimens, whereas both chamber height and width correlate with volume in those tests following an Archimedean spiral. X-ray-tomography shows particular promise in determining which parameters that can be assessed routinely in two dimensions primarily reflect environmental conditions vs. parameters best used for taxonomic identification and for systematic lineage reconstruction.

Benthic flux of dissolved organic matter from lake sediment at different redox conditions and the possible effects of biogeochemical processes.

PubMed

Yang, Liyang; Choi, Jung Hyun; Hur, Jin

2014-09-15

The benthic fluxes of dissolved organic carbon (DOC), chromophoric and fluorescent dissolved organic matter (CDOM and FDOM) were studied for the sediment from an artificial lake, based on laboratory benthic chamber experiments. Conservative estimates for the benthic flux of DOC were 71 ± 142 and 51 ± 101 mg m(-2) day(-1) at hypoxic and oxic conditions, respectively. Two humic-like (C1 and C2), one tryptophan-like (C3), and one microbial humic-like (C4) components were identified from the samples using fluorescence excitation emission matrices and parallel factor analysis (EEM-PARAFAC). During the incubation period, C3 was removed while C4 was accumulated in the overlying water with no significant difference in the trends between the redox conditions. The humification index (HIX) increased with time. The combined results for C3, C4 and HIX suggested that microbial transformation may be an important process affecting the flux behaviors of DOM. In contrast, the overall accumulations of CDOM, C1, and C2 in the overlying water occurred only for the hypoxic condition, which was possibly explained by their enhanced photo-degradation and sorption to redox-sensitive minerals under the oxic condition. Our study demonstrated significant benthic flux of DOM in lake sediment and also the possible involvement of biogeochemical transformation in the processes, providing insight into carbon cycling in inland waters. Copyright © 2014 Elsevier Ltd. All rights reserved.

Reorientation and Swimming Stability in Sea Urchin Larvae

NASA Astrophysics Data System (ADS)

Wheeler, J.; Chan, K. Y. K.; Anderson, E.; Helfrich, K. R.; Mullineaux, L. S.; Sengupta, A.; Stocker, R.

2016-02-01

Many benthic marine invertebrates have two-phase life histories, relying on planktonic larval stages for dispersal and exchange of individuals between adult populations. The dispersal of planktonic larvae is determined by two factors: passive advection by the ambient flow and active motility. By modifying dispersal and ultimately settlement, larval motility influences where and when individuals recruit into benthic communities. Despite its ecological relevance, our understanding of larval motility and behavior in the plankton remains limited, especially regarding the interactions of larval motility and ambient turbulence. As most larvae are smaller than the Kolmogorov scale, they experience ocean turbulence in part as a time-changing viscous torque produced by local fluid shear. This torque causes larval reorientation, impacting swimming direction and potentially dispersal at the macroscale. It is therefore paramount to understand the mechanisms of larval reorientation and the stability of larvae against reorientation. Here we report on the larval reorientation behavior of the sea urchins Arbacia punctulata and Heliocidaris crassispina. Both species have life histories characterized by ontogenetic changes to internal density structure and morphology, which we hypothesized to impact stability. To test this hypothesis, we performed "flip chamber" experiments, in which larvae swim freely in a small chamber that is intermittently inverted, mimicking the overturning experienced by larvae in turbulence. We investigated the role of larval age, body size, species, morphology (number of arms), and motility (live versus dead) on the reorientation dynamics. Our work contributes to a more mechanistic understanding of the role of hydrodynamics in the motility and transport of planktonic larvae.

Effects of an oil spill on benthic community production and respiration on subtropical intertidal sandflats.

PubMed

Lee, Li-Hua; Lin, Hsing-Juh

2013-08-15

This study determined effects of an oil spill on subtropical benthic community production and respiration by monitoring CO2 fluxes in benthic chambers on intertidal sandflats during emersion before and after an accidental spill. The oil spill decreased sediment chlorophyll a concentrations, altered benthic macrofaunal community, and affected ecological functioning by suppressing or even stopping microalgal production, increasing bacterial respiration, and causing a shift from an autotrophic system to a heterotrophic system. Effects of the oil spill on the macrofauna were more severe than on benthic microalgae, and affected sedentary infauna more than motile epifauna. Despite the oil spill's impact on the benthic community and carbon metabolism, the affected area appeared to return to normal in about 23 days. Our results suggest that the prompt response of benthic metabolism to exposure to petroleum hydrocarbons can serve as a useful indicator of the impact of an oil spill. Copyright © 2013 Elsevier Ltd. All rights reserved.

Nitrification and denitrification in a midwestern stream containing high nitrate: In situ assessment using tracers in dome-shaped incubation chambers

USGS Publications Warehouse

Smith, R.L.; Böhlke, J.K.; Repert, D.A.; Hart, C.P.

2009-01-01

The extent to which in-stream processes alter or remove nutrient loads in agriculturally impacted streams is critically important to watershed function and the delivery of those loads to coastal waters. In this study, patch-scale rates of in-stream benthic processes were determined using large volume, open-bottom benthic incubation chambers in a nitrate-rich, first to third order stream draining an area dominated by tile-drained row-crop fields. The chambers were fitted with sampling/mixing ports, a volume compensation bladder, and porewater samplers. Incubations were conducted with added tracers (NaBr and either 15N[NO3-], 15N[NO2-], or 15N[NH4+]) for 24-44 h intervals and reaction rates were determined from changes in concentrations and isotopic compositions of nitrate, nitrite, ammonium and nitrogen gas. Overall, nitrate loss rates (220-3,560 ??mol N m-2 h-1) greatly exceeded corresponding denitrification rates (34-212 ??mol N m-2 h-1) and both of these rates were correlated with nitrate concentrations (90-1,330 ??M), which could be readily manipulated with addition experiments. Chamber estimates closely matched whole-stream rates of denitrification and nitrate loss using 15N. Chamber incubations with acetylene indicated that coupled nitrification/denitrification was not a major source of N2 production at ambient nitrate concentrations (175 ??M), but acetylene was not effective for assessing denitrification at higher nitrate concentrations (1,330 ??M). Ammonium uptake rates greatly exceeded nitrification rates, which were relatively low even with added ammonium (3.5 ??mol N m-2 h-1), though incubations with nitrite demonstrated that oxidation to nitrate exceeded reduction to nitrogen gas in the surface sediments by fivefold to tenfold. The chamber results confirmed earlier studies that denitrification was a substantial nitrate sink in this stream, but they also indicated that dissolved inorganic nitrogen (DIN) turnover rates greatly exceeded the rates of permanent nitrogen removal via denitrification. ?? Springer Science+Business Media B.V. 2009.

Growth oscillation in larger foraminifera.

PubMed

Briguglio, Antonino; Hohenegger, Johann

2014-01-01

This work shows the potential for applying three-dimensional biometry to studying cell growth in larger benthic foraminifera. The volume of each test chamber was measured from the three-dimensional model obtained by means of computed tomography. Analyses of cell growth based on the sequence of chamber volumes revealed constant and significant oscillations for all investigated specimens, characterized by periods of approximately 15, 30, 90, and 360 days. Possible explanations for these periods are connected to tides, lunar cycles, and seasonality. The potential to record environmental oscillations or fluctuations during the lifetime of larger foraminifera is pivotal for reconstructing short-term paleoenvironmental variations or for gaining insight into the influence of tides or tidal current on the shallow-water benthic fauna in both recent and fossil environments.

Benthic metabolism over the emersion - immersion alternation in sands colonized by the invasive Manila clam Ruditapes philippinarum

NASA Astrophysics Data System (ADS)

Migné, Aline; Trigui, Rima Jihane; Davoult, Dominique; Desroy, Nicolas

2018-01-01

The effect of an invasive infaunal suspension-feeding bivalve, the Manila clam Ruditapes philippinarum, on benthic inorganic carbon and nutrient fluxes was examined through in situ incubations. Measurements were performed in spring and summer on a tidal sandflat of the Rance estuary (south part of the Western English Channel) colonized by the Manila clam after its deliberate introduction in the 1990's. Benthic inorganic carbon fluxes were measured using light and dark benthic chambers both at emersion and immersion. Benthic nutrient fluxes were measured using dark benthic chambers at immersion. Inorganic carbon (IC) and ammonium sediment release under darkness at immersion reached 5.60 mmol m-2 h-1 and 441 μmol m-2 h-1 respectively for a clam density of 291 ind m-2. The sediment IC-release under darkness was lower during emersion than during immersion, probably due to the reduced activity of infauna at low tide. Under ambient light, a sediment IC-uptake was systematically measured at emersion, indicating a net autotrophy under the condition of measurements (125 < surface PAR < 1670 μmol m-2 s-1), while either sediment IC-uptake or release was measured at immersion according to light variation (20 < underwater PAR < 990 μmol m-2 s-1). The highest gross community primary production, calculated from highest IC-fluxes at light (i.e. net community production) and highest IC-fluxes at dark (i.e. community respiration), was similar at emersion and immersion and reached 6.2 mmolC m-2 h-1. These results suggest that the metabolic activity of the invasive Manila clam Ruditapes philippinarum contributes to increase inorganic C and ammonium sediment release. These regenerated nutrients may support microphytobenthic production which appeared particularly high on this intertidal sand flat.

Best Practices for In-Situ Sediment-Water Incubations with Benthic Landers

NASA Astrophysics Data System (ADS)

Tengberg, Anders; Kononets, Mikhail; Hall, Per; Nilsson, Madeleine; Ekeroth, Nils

2017-04-01

Biological, chemical, physical and geological processes that take place at the seafloor are crucial in influencing and regulating many aquatic environments. One method to estimate exchange rates, fluxes, between the sediment and the overlying water is in-situ sediment-water incubations using autonomous chamber landers. As for all field sampling and measurements best practices methods are needed to obtain high quality data. With experiences form many years usage of the Gothenburg autonomous bottom lander systems this presentation will describe some of the experimental work that has been done with focus on quality control and data evaluation methods.

The Effects of Oxygen Concentration on Benthic Foraminiferal Growth and Size

NASA Astrophysics Data System (ADS)

Ng, B.; Keating-Bitonti, C.; Payne, J.

2015-12-01

Many organisms use oxygen through cellular respiration in order to gain energy. For this reason, oxygen has a significant influence on organism size and growth. The amount of oxygen an organism needs depends on its metabolic demand, which is partially a function organism size (i.e., mass). The Santa Monica Basin (SMB) is an oxygen minimum zone located off the southern coast of California that maintains a steep oxygen gradient and is thus an ideal location for conducting research on how oxygen influences organism size. Here we use benthic foraminifera, widespread single-celled protists that produce shells (tests), to study the controls of oxygen on organism size. Because cell mass and cell volume are correlated, we study trends in the log test volume of four abundant species from SMB: Uvigerina peregrina, Bolivina spissa, B. argentea, Loxostomum pseudobeyrichi. These foraminifera make multi-chambered tests, thus we also count the number of chambers per specimen in order to further assess their growth under varying oxygen concentrations. We analyzed the data using quantile regressions to determine trends in not only median values of the log test volume and number of chambers as a function of oxygen concentrations, but also in the 10th, 25th, 75th, and 90th percentiles because oxygen availability often constrains the maximum and minimum size of organisms. Our results show a positive correlation between oxygen concentration and the maximum log test volumes of L. pseudobeyrichi and B. argentea, supporting our hypothesis. However, we observed a negative correlation between oxygen concentration and the maximum percentiles of log test volume in U. peregrina. Nevertheless, U. peregrina still displays a positive correlation between chamber number and oxygen concentrations in line with our hypothesis. The preponderance of trends supporting a direct correlation between log test volume or chamber number and oxygen concentration suggest that oxygen limits the maximum obtainable size of benthic foraminifera through its effects on test volume or chamber growth. This study is important because it holds a glimpse into how changes in oxygen levels can affect organisms given current fluctuations in oxygen level around the world due to man-made climate change.

Carbonate chemistry of an in-situ free-ocean CO2 enrichment experiment (antFOCE) in comparison to short term variation in Antarctic coastal waters.

PubMed

Stark, J S; Roden, N P; Johnstone, G J; Milnes, M; Black, J G; Whiteside, S; Kirkwood, W; Newbery, K; Stark, S; van Ooijen, E; Tilbrook, B; Peltzer, E T; Berry, K; Roberts, D

2018-02-12

Free-ocean CO 2 enrichment (FOCE) experiments have been deployed in marine ecosystems to manipulate carbonate system conditions to those predicted in future oceans. We investigated whether the pH/carbonate chemistry of extremely cold polar waters can be manipulated in an ecologically relevant way, to represent conditions under future atmospheric CO 2 levels, in an in-situ FOCE experiment in Antarctica. We examined spatial and temporal variation in local ambient carbonate chemistry at hourly intervals at two sites between December and February and compared these with experimental conditions. We successfully maintained a mean pH offset in acidified benthic chambers of -0.38 (±0.07) from ambient for approximately 8 weeks. Local diel and seasonal fluctuations in ambient pH were duplicated in the FOCE system. Large temporal variability in acidified chambers resulted from system stoppages. The mean pH, Ω arag and fCO 2 values in the acidified chambers were 7.688 ± 0.079, 0.62 ± 0.13 and 912 ± 150 µatm, respectively. Variation in ambient pH appeared to be mainly driven by salinity and biological production and ranged from 8.019 to 8.192 with significant spatio-temporal variation. This experiment demonstrates the utility of FOCE systems to create conditions expected in future oceans that represent ecologically relevant variation, even under polar conditions.

Geochemical signatures of benthic foraminifera shells from a heat-polluted shallow marine environment provide field evidence for growth and calcification under extreme warmth

NASA Astrophysics Data System (ADS)

Titelboim, Danna; Sadekov, Aleksey; Almogi-Labin, Ahuva; Herut, Barak; Kucera, Michal; Schmidt, Christiane; Hyams-Kaphzan, Orit; Abramovich, Sigal

2017-04-01

Shallow marine calcifiers play an important role as marine ecosystem engineers and in the global carbon cycle. Understanding their response to warming is essential to evaluate the fate of marine ecosystems under global change scenarios. So far, most data on thermal tolerance of marine calcifiers have been obtained by manipulative laboratory experiments. Such experiments provide valuable physiological data, but it remains unclear to what degree these observations apply to natural ecosystems. A rare opportunity to test the effect of warming acting on ecosystem-relevant scales is by investigation of heat-polluted coastal areas. Here we study growth and calcification in benthic foraminifera that inhabit a thermally polluted coastal area in Israel, where they are exposed to temperature elevated by 6˚ C above the natural seasonal temperature range and reaching up to ˜42˚ C in summer. Several species of benthic foraminifera have been previously shown to persist throughout the year in the heat-polluted area, allowing us to examine in natural conditions the thermal limits of growth and calcification under extreme temperatures as they are expected to prevail in the future. Live specimens of two known heat tolerant species Lachlanella sp. 1 and Pararotalia calcariformata were collected over a period of one year from two stations, representing thermally polluted and undisturbed (control) shallow hard bottom habitats. Single-chamber element ratios of these specimens were obtained using laser ablation and the Mg/Ca of the last chambers (grown closest to the time of collection) were used to calculate calcification temperatures. Our results provide the first direct field evidence that these foraminifera species not only persist extreme warm temperatures but continue to grow and calcify. Species-specific Mg/Ca thermometry indicates that P. calcariformata precipitate their shells at temperatures as high as 40˚ C and Lachlanella sp. 1 at least up to 36˚ C. Instead, both species showed a calcification threshold above the local winter temperatures. Calcification in P. calcariformata only occurred above 22˚ C and in Lachlanella sp. 1 above 15˚ C. Our observations from the heat-polluted area indicate that under future warming scenarios, growth and calcification in both benthic foraminifera species will not be inhibited during summer heat and the seasonal temperature window for their calcification will be expanded throughout much of the year. The observed inhibition of calcification at low temperatures indicates that the role of heat-tolerant foraminifera in carbonate production will most likely increase in future decades.

In Situ and Ex Situ Estimates of Benthic Silica Fluxes in NGOM Shelf Sediments

NASA Astrophysics Data System (ADS)

Ebner, B. C.; Ghaisas, N. A.; Maiti, K.

2017-12-01

Biogenic silica (bSi), plays an important role in regulating primary productivity of diatoms in coastal and shelf ecosystems fed by major rivers. In the Northern Gulf of Mexico (NGOM), loading of nitrogen (N) and phosphorous (P) have increased compared to a decline in silicic acid in the Mississippi River (MR). Continued decreasing in silicic acid concentration could lead to limited diatom growth and production, therefore, it is important understand the role of benthic fluxes in providing silica to the overlying water column. The benthic flux of Si from shelf sediments can thus represent an important source of Si to be utilized by diatoms. Sediment core incubations and benthic chamber deployments were conducted at 5 sites in the Mississippi river plume with varying salinities during periods of high river discharge (May 2017), low river discharge (August 2016) and peak in hypoxia (July 2017). Preliminary data indicates large spatial and temporal variability in benthic silica fluxes ranging between 1.1 to 5.9 mmol/m2/d. This large variability in benthic silica flux is probably related to the seasonal changes in river discharge, primary production, community composition and sediment biogeochemistry in the region.

Move! - a deep Ocean Underwater Robot for Bio-Geochemical Research

NASA Astrophysics Data System (ADS)

Waldmann, C.; Epping, E.; Move! Team

2003-04-01

Within the framework of the binationally funded project MOVE! the partners from the Netherlands and Germany are pursuing the development of a versatile, autonomous vehicle for benthic research. The system acts as a modular platform for different scientific sensors and by moving on the sea floor will allow for taking measurements at defined locations. By combining acoustical navigation methods with other new position tracking devices an accurate positioning can be achieved. Both the vehicle subsystems and the scientific sensors will be powered by a dedicated energy source. The scientific application lies in the area of multidisciplinary studies (physics, chemistry, sedimentology and biology) with an emphasis on element cycling in marine sediments and benthic boundary layer from coastal areas to deep sea. Application of the vehicle should enable timed monitoring and experimentation to study temporal dynamics in forcing and effects, and allow for multiple sites to be studied in a single area to cover spatial variability. Typical experiments would require (1) enclosing an area of sediment and overlying water to monitor the chemical exchange between sediment and water to study the actual base line activities (2) manipulation of the sediment-overlying water by adding dissolved substances or particulate substances (food+ inert tracers) and the subsequent monitoring of overlying water chemistry (oxygen, DIC, pH, nitrate, ammonium, silicate) in order to assess biological responses to chemical disturbances. Sediments should be recovered after the experiment. (3)The monitoring of pore water chemistry by use of microelectrodes and HR-DET probes baseline and after addition in preceding chamber experiment (requires careful repositioning with high accuracy or a combined chamber-profiling unit) (4) Injection of labeled organic and inorganic substrates in the sediment and recovery of sediment cores in order to measure specific activities and to disentangle trophic relationships within sediments. The presentation will explain details of the design concept and how the envisaged scientific goals will be reached.

Benthic microbial fuel cell as direct power source for an acoustic modem and seawater oxygen/temperature sensor system.

PubMed

Gong, Yanming; Radachowsky, Sage E; Wolf, Michael; Nielsen, Mark E; Girguis, Peter R; Reimers, Clare E

2011-06-01

Supported by the natural potential difference between anoxic sediment and oxic seawater, benthic microbial fuel cells (BMFCs) promise to be ideal power sources for certain low-power marine sensors and communication devices. In this study a chambered BMFC with a 0.25 m(2) footprint was used to power an acoustic modem interfaced with an oceanographic sensor that measures dissolved oxygen and temperature. The experiment was conducted in Yaquina Bay, Oregon over 50 days. Several improvements were made in the BMFC design and power management system based on lessons learned from earlier prototypes. The energy was harvested by a dynamic gain charge pump circuit that maintains a desired point on the BMFC's power curve and stores the energy in a 200 F supercapacitor. The system also used an ultralow power microcontroller and quartz clock to read the oxygen/temperature sensor hourly, store data with a time stamp, and perform daily polarizations. Data records were transmitted to the surface by the acoustic modem every 1-5 days after receiving an acoustic prompt from a surface hydrophone. After jump-starting energy production with supplemental macroalgae placed in the BMFC's anode chamber, the average power density of the BMFC adjusted to 44 mW/m(2) of seafloor area which is better than past demonstrations at this site. The highest power density was 158 mW/m(2), and the useful energy produced and stored was ≥ 1.7 times the energy required to operate the system.

Determination on the chemical composition of Ammonia beccarii shell using SEM and EDX: Preliminary study of benthic foraminifera capacity in response to anthropogenic metal contamination in coastal areas

NASA Astrophysics Data System (ADS)

Rositasari, R.; Suratno; Yogaswara, D.

2018-02-01

The use of single-celled and shelled biota, such as foraminifera that lives as benthic, in coastal environmental monitoring activity is very efficient. Several species of the Ammonia have been used as a proxy of various aquatic environmental monitoring activities. Chemical constituents screening in foraminiferal shell is a step ahead to identify the capacity of benthic foraminifera in responding to anthropogenic metal contamination in coastal water areas. The initial hypothesis of this study is the calcite test of Ammonia beccarii binds the anthropogenic metal in its shell structure and triggers the deformation test. The normal and abnormal shells of Ammonia specimens from Jakarta Bay and Batam waters are used in this study. The Ponar grab was used to sample surface sediment in Jakarta Bay and Batam waters in 2015, and the short core was used to acquire substratum sediment in Jakarta Bay in 2011.The Ammonia beccarii shell was analyzed using SEM and EDX detectors (Scanning Electron Microscope and Energy Dispersive X-ray). The shooting was performed three times in each test, i.e. in the first chamber (proloculus), the last chamber and the chamber between the two. The main building blocks of the foraminifera test are oxygen with an average weight range of 42.86 - 58.79% and carbon with an average weight range of 17.69 - 26.32%. There is a tendency for low levels of C and O elements in the abnormal tests.

In situ observations of wave pumping of sediments in the Yellow River Delta with a newly developed benthic chamber

NASA Astrophysics Data System (ADS)

Zhang, Shaotong; Jia, Yonggang; Zhang, Yaqi; Liu, Xiaolei; Shan, Hongxian

2018-03-01

A specially designed benthic chamber for the field observation of sediment resuspension that is caused by the wave-induced oscillatory seepage effect (i.e., the wave pumping of sediments) is newly developed. Observational results from the first sea trial prove that the geometry design and skillful instrumentation of the chamber well realize the goal of monitoring the wave pumping of sediments (WPS) continuously. Based on this field dataset, the quantitative contribution of the WPS to the total sediment resuspension is estimated to be 20-60% merely under the continuous action of normal waves (Hs ≤ 1.5 m) in the subaqueous Yellow River Delta (YRD). Such a large contribution invalidates a commonly held opinion that sediments are purely eroded from the seabed surface by the horizontal "shearing effect" from the wave orbital or current velocities. In fact, a considerable amount of sediments could originate from the shallow subsurface of seabed driven by the vertical "pumping effect" of the wave-generated seepage flows during wavy periods. According to the new findings, an improved conceptual model for the resuspension mechanisms of silty sediments under various hydrodynamics is proposed for the first time.

Microcrustacea in flowing water - experimental-analysis of washout times and a field-test

USGS Publications Warehouse

Richardson, W.B.

1992-01-01

1. Flow-chamber experiments were conducted to evaluate the ability of microcrustacea to maintain position in moving water. These results were compared to distributions of zooplankton and water velocity in a stream pool to determine the relationship of animal density to water movement and swimming ability.^2. Cladocerans exhibited negative rheotaxis (directed behaviour against a current) but poor ability to maintain position at velocities >2.5 Cm s-1. Daphnia and scapholeberis were better at avoiding washout than moina and diaphanosoma. At velocities 2.5 Cm s-1, scapholeberis >3.2 Cm s-1 and eucyclops >7.75 Cm s-1. Washout time of daphnia and scapholeberis was positively related to body size and negatively to water velocity and possession of eggs. Washout was inversely related to water velocity for eucyclops.^4. Highest densities of microcrustacea in a stream pool were found in non-flowing or downstream zones of the pool. Benthic (hydracarina, harpacticoid copepods, ostracods) and fast-swimming (cyclopoids) forms were most common in flowing zones. Facultatively benthic cladocera were abundant in regions of no flow. Rotifers and immature copepods were most abundant at the downstream end of the pool.^5. Behavioural mechanisms for remaining in stream pools at times of high flow appear to include: (i) flow avoidance (simocephalus, chydorus, scapholeberis and cyclopoids), (ii) use of benthic habitat (ostracods, harpacticoids, hydracarina), (iii) strong swimming ability (cyclopoids).

Insights on geochemical cycling of U, Re and Mo from seasonal sampling in Boston Harbor, Massachusetts, USA

USGS Publications Warehouse

Morford, J.L.; Martin, W. R.; Kalnejais, Linda H.; Francois, R.; Bothner, Michael H.; Karle, I.-M.

2007-01-01

This study examined the removal of U, Mo, and Re from seawater by sedimentary processes at a shallow-water site with near-saturation bottom water O2 levels (240–380 μmol O2/L), very high organic matter oxidation rates (annually averaged rate is 880 μmol C/cm2/y), and shallow oxygen penetration depths (4 mm or less throughout the year). Under these conditions, U, Mo, and Re were removed rapidly to asymptotic pore water concentrations of 2.2–3.3 nmol/kg (U), 7–13 nmol/kg (Mo), and 11–14 pmol/kg (Re). The depth order in which the three metals were removed, determined by fitting a diffusion-reaction model to measured profiles, was Re < U < Mo. Model fits also suggest that the Mo profiles clearly showed the presence of a near-interface layer in which Mo was added to pore waters by remineralization of a solid phase. The importance of this solid phase source of pore water Mo increased from January to October as the organic matter oxidation rate increased, bottom water O2 decreased, and the O2 penetration depth decreased. Experiments with in situ benthic flux chambers generally showed fluxes of U and Mo into the sediments. However, when the overlying water O2 concentration in the chambers was allowed to drop to very low levels, Mn and Fe were released to the overlying water along with the simultaneous release of Mo and U. These experiments suggest that remineralization of Mn and/or Fe oxides may be a source of Mo and perhaps U to pore waters, and may complicate the accumulation of U and Mo in bioturbated sediments with high organic matter oxidation rates and shallow O2 penetration depths.Benthic chamber experiments including the nonreactive solute tracer, Br−, indicated that sediment irrigation was very important to solute exchange at the study site. The enhancement of sediment–seawater exchange due to irrigation was determined for the nonreactive tracer (Br−), TCO2, NH4+">NH4+, U and Mo. The comparisons between these solutes showed that reactions within and around the burrows were very important for modulating the Mo flux, but less important for U. The effect of these reactions on Mo exchange was highly variable, enhancing Mo (and, to a lesser extent, U) uptake at times of relatively modest irrigation, but inhibiting exchange when irrigation rates were faster. These results reinforce the observation that Mo can be released to and removed from pore waters via sedimentary reactions.The removal rate of U and Mo from seawater by sedimentary reactions was found to agree with the rate of accumulation of authigenic U and Mo in the solid phase. The fluxes of U and Mo determined by in situ benthic flux chamber measurements were the largest that have been measured to date. These results confirm that removal of redox-sensitive metals from continental margin sediments underlying oxic bottom water is important, and suggest that continental margin sediments play a key role in the marine budgets of these metals.

Benthic incubation chambers for estimating nitrogen flux at the sediment water interface

EPA Science Inventory

USEPA’s Sustainable and Healthy Communities (SHC) research program seeks to better understand how ecosystem functions produce ecosystem goods and services (EGS) in order to develop quantitative tools for informing decisions that lead to more sustainable results. Our incompl...

Benthic Carbon Mineralization in Hadal Trenches: Insights From In Situ Determination of Benthic Oxygen Consumption

NASA Astrophysics Data System (ADS)

Luo, Min; Glud, Ronnie N.; Pan, Binbin; Wenzhöfer, Frank; Xu, Yunping; Lin, Gang; Chen, Duofu

2018-03-01

Hadal trenches have been proposed as depocenters of organic material and hot spots for organic matter mineralization. In this study, we for the first time quantified the total benthic O2 uptake in hadal trenches using in situ chamber incubations. Three trenches in the tropical Pacific were targeted and exhibited relatively high diagenetic activity given the great water depths, that is, the Mariana Trench (2.0 × 102 μmol O2 m-2 d-1, 10,853 m), the Mussau Trench (2.7 ± 0.1 × 102 μmol O2 m-2 d-1, 7,011 m), and the New Britain Trench (6.0 ± 0.1 × 102 μmol O2 m-2 d-1, 8,225 m). Combined with the analyses of total organic carbon and δ13C of total organic carbon in the sediments and previously published in situ O2 microprofiles from hadal settings, we suggest that hadal benthic carbon mineralization partly is governed by the surface production and also is linked to the distance from land. Therefore, we highlight that terrestrial organic matter can be of importance in sustaining benthic communities in some hadal settings.

Impact of salinity on element incorporation in two benthic foraminiferal species with contrasting magnesium contents

NASA Astrophysics Data System (ADS)

Geerken, Esmee; de Nooijer, Lennart Jan; van Dijk, Inge; Reichart, Gert-Jan

2018-04-01

Accurate reconstructions of seawater salinity could provide valuable constraints for studying past ocean circulation, the hydrological cycle and sea level change. Controlled growth experiments and field studies have shown the potential of foraminiferal Na / Ca as a direct salinity proxy. Incorporation of minor and trace elements in foraminiferal shell carbonate varies, however, greatly between species and hence extrapolating calibrations to other species needs validation by additional (culturing) studies. Salinity is also known to impact other foraminiferal carbonate-based proxies, such as Mg / Ca for temperature and Sr / Ca for sea water carbonate chemistry. Better constraints on the role of salinity on these proxies will therefore improve their reliability. Using a controlled growth experiment spanning a salinity range of 20 units and analysis of element composition on single chambers using laser ablation-Q-ICP-MS, we show here that Na / Ca correlates positively with salinity in two benthic foraminiferal species (Ammonia tepida and Amphistegina lessonii). The Na / Ca values differ between the two species, with an approximately 2-fold higher Na / Ca in A. lessonii than in A. tepida, coinciding with an offset in their Mg content ( ˜ 35 mmol mol-2 versus ˜ 2.5 mmol mol-1 for A. lessonii and A. tepida, respectively). Despite the offset in average Na / Ca values, the slopes of the Na / Ca-salinity regressions are similar between these two species (0.077 versus 0.064 mmol mol-1 change per salinity unit). In addition, Mg / Ca and Sr / Ca are positively correlated with salinity in cultured A. tepida but show no correlation with salinity for A. lessonii. Electron microprobe mapping of incorporated Na and Mg of the cultured specimens shows that within chamber walls of A. lessonii, Na / Ca and Mg / Ca occur in elevated bands in close proximity to the primary organic lining. Between species, Mg banding is relatively similar, even though Mg content is 10 times lower and that variation within the chamber wall is much less pronounced in A. tepida. In addition, Na banding is much less prominent in this species than it is in A. lessonii. Inter-species differences in element banding reported here are hypothesized to be caused by differences in biomineralization controls responsible for element uptake.

Quantifying benthic nitrogen fluxes in Puget Sound, Washington: a review of available data

USGS Publications Warehouse

Sheibley, Richard W.; Paulson, Anthony J.

2014-01-01

Understanding benthic fluxes is important for understanding the fate of materials that settle to the Puget Sound, Washington, seafloor, as well as the impact these fluxes have on the chemical composition and biogeochemical cycles of marine waters. Existing approaches used to measure benthic nitrogen flux in Puget Sound and elsewhere were reviewed and summarized, and factors for considering each approach were evaluated. Factors for selecting an appropriate approach for gathering information about benthic flux include: availability of resources, objectives of projects, and determination of which processes each approach measures. An extensive search of literature was undertaken to summarize known benthic nitrogen fluxes in Puget Sound. A total of 138 individual flux chamber measurements and 38 sets of diffusive fluxes were compiled for this study. Of the diffusive fluxes, 35 new datasets were located, and new flux calculations are presented in this report. About 65 new diffusive flux calculations are provided across all nitrogen species (nitrate, NO3-; nitrite, NO2-; ammonium, NH4+). Data analysis of this newly compiled benthic flux dataset showed that fluxes beneath deep (greater than 50 meters) water tended to be lower than those beneath shallow (less than 50 meters) water. Additionally, variability in flux at the shallow depths was greater, possibly indicating a more dynamic interaction between the benthic and pelagic environments. The overall range of bottom temperatures from studies in the Puget Sound area were small (5–16 degrees Celsius), and only NH4+ flux showed any pattern with temperature. For NH4+, flux values and variability increased at greater than about 12 degrees Celsius. Collection of additional study site metadata about environmental factors (bottom temperature, depth, sediment porosity, sediment type, and sediment organic matter) will help with development of a broader regional understanding benthic nitrogen flux in the Puget Sound.

The application of "natural" growth rates of Heterostegina depressa to infer timing of reproduction events

NASA Astrophysics Data System (ADS)

Eder, Wolfgang; Julia, Woeger; Kinoshita, Shunichi; Hohenegger, Johann; Briguglio, Antonino

2017-04-01

To explore applicability of the natural laboratory approach (sensu Hohenegger) on population dynamic studies of recent larger benthic foraminifera, this relatively new experimental method has been applied on Heterostegina depressa populations from Sesoko Jima, NW Okinawa, Japan. It is used to gain an averaged chamber and diameter building rate, as well as the average longevity of H. depressa based on monthly samplings at fixed sampling stations. Samples were collected by SCUBA in 16 monthly intervals around 20 and 50 meters water depth, wherefrom live populations were dried and investigated by microCT. The specimens were measured regarding chamber number and maximum diameter. This biometric data has been tested for the presence of multiple generations of H. depressa megalospheres. In case of skewed or bimodal frequency distributions, they were decomposed into normally distributed components. Means and standard deviations of each component of every month were extracted and could be used to calculate the maximum values of chamber number and diameter for all sampling intervals. Based on these maximal values, the natural chamber/diameter growth rate was fitted by Michaelis-Menten functions. By inversion of this growth functions the birthdate of every specimen was calculated. Frequency diagrams of these dates reveal a continuous background reproduction throughout the year, yet show distinct reproduction peaks in late spring and late autumn. Further, sinusoidal regression analysis support these two main reproduction cycles, one short-term cycle 70 days and a one long-term cycles around 180 days. Surprisingly, similar cycles have been found in different studies on volumetric growth of larger benthic foraminifera.

Influence of sea squirt (Halocynthia roretzi) aquaculture on benthic-pelagic coupling in coastal waters: A study of the South Sea in Korea

NASA Astrophysics Data System (ADS)

Lee, Jae Seong; Kim, Sung-Han; Kim, Yong-Tae; Hong, Sok Jin; Han, Jeong Hee; Hyun, Jung-Ho; Shin, Kyung-Hoon

2012-03-01

The influence of sea squirt aquaculture on benthic-pelagic coupling was evaluated in semi-enclosed Korean coastal waters with an in situ benthic chamber and results show for the first time that suspended sea squirt cultures play an important role in benthic-pelagic coupling in the coastal zone. Measurements of primary production, vertical particulate fluxes, and benthic fluxes were made at two stations, a sea squirt (Halocynthia roretzi) farm (SSF) and an area of organic-matter-enriched sediment in Jinhae Bay. The vertical material fluxes of organic carbon, nitrogen, and biogenic silicate (BSi) were significantly higher at SSF than in Jinhae Bay, indicating massive biodeposits in the surface sediments at SSF. The organic carbon oxidation rates (Cox) were estimated after correction for CaCO3 dissolution. The average Cox at SSF (204 mmol C m-2 d-1) was significantly higher than that in the organic-enriched Jinhae Bay sediment (77 mmol C m-2 d-1). The organic carbon burial fluxes were determined using vertical profiles of organic carbon of up to 30 cm and the sedimentation rate calculated from the excess 210Pb distribution. At both stations, ˜95% of the settled organic carbon was oxidized and only ˜5% was buried in the deep sediment layer. The benthic fluxes of dissolved inorganic nitrogen and phosphate at SSF were 2-12 times higher than in Jinhae Bay, corresponding to 85%, and 270%, respectively, of the requirements for primary production.

Consequences of Increasing Hypoxic Disturbance on Benthic Communities and Ecosystem Functioning

PubMed Central

Villnäs, Anna; Norkko, Joanna; Lukkari, Kaarina; Hewitt, Judi; Norkko, Alf

2012-01-01

Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota) effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface) by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days) in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential), gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH4 + and dissolved Si. Although effluxes of PO4 3− were not altered significantly, changes were observed in sediment PO4 3− sorption capability. The duration of hypoxia (i.e. number of days of stress) explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the benthic habitat matters, and that the link between biodiversity and ecosystem function is likely to be affected by a range of factors in complex, natural environments. PMID:23091592

Respiration of bivalves from three different deep-sea areas: Cold seeps, hydrothermal vents and organic carbon-rich sediments

NASA Astrophysics Data System (ADS)

Khripounoff, A.; Caprais, J. C.; Decker, C.; Le Bruchec, J.; Noel, P.; Husson, B.

2017-08-01

We studied bivalves (vesicomyids and mytilids) inhabiting four different areas of high sulfide and methane production: (1) in the Gulf of Guinea, two pockmarks (650 m and 3150 m depth) and one site rich in organic sediments in the deepest zone (4950 m average depth), (2) at the Azores Triple Junction on the Mid-Atlantic Ridge, one hydrothermal site (Lucky Strike vent field, 1700 m depth). Two types of Calmar benthic chambers were deployed, either directly set into the sediment (standard Calmar chamber) or fitted with a tank to isolate organisms from the sediment (modified Calmar chamber), to assess gas and solute exchanges in relation to bivalve bed metabolism. Fluxes of oxygen, total carbon dioxide, ammonium and methane were measured. At the site with organic-rich sediments, oxygen consumption by clams measured in situ with the standard benthic chamber was variable (1.3-6.7 mmol m-2 h-1) as was total carbon dioxide production (1-9.6 mmol m-2 h-1). The observed gas and solute fluxes were attributed primarily to bivalve respiration (vesicomyids or mytilids), but microbial and geochemical processes in the sediment may be also responsible for some of variations in the deepest stations. The respiration rate of isolated vesicomyids (16.1-0.25.7 μmol g-1 dry weight h-1) was always lower than that of mytilids (33 μmol g-1 dry weight h-1). This difference was attributed to the presence of a commensal scaleworm in the mytilids. The respiratory coefficient (QR) ≥1 indicated high levels of anaerobic metabolism. The O:N index ranged from 5 to 25, confirming that vesicomyids and mytilids, living in symbiosis with bacteria, have a protein-based food diet.

Palaeonummulites venosus: Natural growth rates and quantification by means of CT investigation

NASA Astrophysics Data System (ADS)

Kinoshita, Shunichi; Eder, Wolfgang; Woeger, Julia; Hohenegger, Johann; Briguglio, Antonino

2016-04-01

Symbiont-bearing larger benthic Foraminifera (LBF) are long-living marine (possibly >1 year), single-celled organisms with complex calcium carbonate shells. Reproduction period, longevity and chamber building rate of LBF are important for population dynamics studies. It was expected that growth experiments in laboratory cultures cannot be used for estimation of chamber building rates and longevity studies although the laboratory conditions were simulated to natural conditions. Therefore, it is necessary to study individual and population growth under natural conditions for getting natural information. Therefore, the 'natural laboratory' method was developed to calculate the averaged chamber building rate and averaged longevity of species based on monthly sampling at fixed sampling stations and to compare with laboratory cultures simulating environmental conditions as close as possible to the natural environment. Thus, in this study, samples of living individuals were collected in 16 monthly intervals at 50m depth in front of Sesoko Island, Okinawa, Japan. We used micro-computed tomography (microCT) to investigate the chamber number of every specimen from the samples immediately dried after sampling. Single non dried specimens were cultured and the time of chamber building was obtained using microphotographs counted for every specimen at 2 to 4 days time intervals. The investigation using the natural laboratory method of Palaeonummulites venosus is based on the decomposition of the monthly frequency distributions into normally distributed components. Then the shift of the component parameters mean and standard deviation was used to calculate the necessary character of maximum chamber number and the Michaelis Menten function was applied to estimate the chamber building rate under natural conditions. This resulted in two reproduction periods, the first starting in May and the second in September, both showing the same chamber building rates, where the first shows a slightly stronger increase in the initial part. Longevity seems to be round about one year. Due to the several reproduction periods, the existence of small and large specimens in the same sample and the bimodal distributions can be explained. The cultured individuals shows a much lower chamber building rate, often demonstrating a longer period with no chamber production just after sampling, the results of sampling shock. This is the first time that it can be shown that chamber building rates and longevities cannot be based on laboratory investigations.

Hawaii Energy and Environmental Technologies Initiative

DTIC Science & Technology

2005-06-01

include a hydrate synthesis system, benthic pressure chambers to simulate deep seafloor sediment, and specialized instrumentation for high pressure...the high probability that a sulfide/oxygen microbial fuel cell can generate electricity in deep ocean sediments, and that prolonged power generation may...hydrogen generation (using an electrolyser) and storage, and on-line high -resolution gas analysis. In addition to installation and commissioning of

Benthic nutrient fluxes and sediment oxygen consumption in a full-scale facultative pond in Patagonia, Argentina.

PubMed

Faleschini, M; Esteves, J L

2013-01-01

The study of benthic metabolism is an interesting tool to understand the process that occurs in bottom water at wastewater stabilization ponds. Here, rates of benthic oxygen consumption and nutrient exchange across the water-sludge interface were measured in situ using a benthic chamber. The research was carried out during autumn, winter, and summer at a municipal facultative stabilization pond working in a temperate region (Puerto Madryn city, Argentina). Both a site near the raw wastewater inlet (Inlet station) and a site near the outlet (Outlet station) were sampled. Important seasonal and spatial patterns were identified as being related to benthic fluxes. Ammonium release ranged from undetectable (autumn/summer - Inlet station) to +30.7 kg-NH4(+) ha(-1) d(-1) (autumn - Outlet station), denitrification ranged from undetectable (winter - in both sites) to -4.0 kg-NO3(-) ha(-1) d(-1) (autumn - Outlet station), and oxygen consumption ranged from 0.07 kg-O2ha(-1) d(-1) (autumn/summer - Outlet station) to 0.84 kg-O2ha(-1) d(-1) (autumn - Inlet station). During the warmer months, the mineralization of organic matter from the bottom pond acts as a source of nutrients, which seem to support the important development of phytoplankton and nitrification activity recorded in the surface water. Bottom processes could be related to the advanced degree and efficiency of the treatment, the temperature, and probably the strong and frequent wind present in the region.

High dissolved organic carbon release by benthic cyanobacterial mats in a Caribbean reef ecosystem

NASA Astrophysics Data System (ADS)

Brocke, Hannah J.; Wenzhoefer, Frank; de Beer, Dirk; Mueller, Benjamin; van Duyl, Fleur C.; Nugues, Maggy M.

2015-03-01

Benthic cyanobacterial mats (BCMs) are increasing in abundance on coral reefs worldwide. However, their impacts on biogeochemical cycling in the surrounding water and sediment are virtually unknown. By measuring chemical fluxes in benthic chambers placed over sediment covered by BCMs and sediment with BCMs removed on coral reefs in Curaçao, Southern Caribbean, we found that sediment covered by BCMs released 1.4 and 3.5 mmol C m-2 h-1 of dissolved organic carbon (DOC) during day and night, respectively. Conversely, sediment with BCMs removed took up DOC, with day and night uptake rates of 0.9 and 0.6 mmol C m-2 h-1. DOC release by BCMs was higher than reported rates for benthic algae (turf and macroalgae) and was estimated to represent 79% of the total DOC released over a 24 h diel cycle at our study site. The high nocturnal release of DOC by BCMs is most likely the result of anaerobic metabolism and degradation processes, as shown by high respiration rates at the mat surface during nighttime. We conclude that BCMs are significant sources of DOC. Their increased abundance on coral reefs will lead to increased DOC release into the water column, which is likely to have negative implications for reef health.

High dissolved organic carbon release by benthic cyanobacterial mats in a Caribbean reef ecosystem.

PubMed

Brocke, Hannah J; Wenzhoefer, Frank; de Beer, Dirk; Mueller, Benjamin; van Duyl, Fleur C; Nugues, Maggy M

2015-03-09

Benthic cyanobacterial mats (BCMs) are increasing in abundance on coral reefs worldwide. However, their impacts on biogeochemical cycling in the surrounding water and sediment are virtually unknown. By measuring chemical fluxes in benthic chambers placed over sediment covered by BCMs and sediment with BCMs removed on coral reefs in Curaçao, Southern Caribbean, we found that sediment covered by BCMs released 1.4 and 3.5 mmol C m(-2) h(-1) of dissolved organic carbon (DOC) during day and night, respectively. Conversely, sediment with BCMs removed took up DOC, with day and night uptake rates of 0.9 and 0.6 mmol C m(-2) h(-1). DOC release by BCMs was higher than reported rates for benthic algae (turf and macroalgae) and was estimated to represent 79% of the total DOC released over a 24 h diel cycle at our study site. The high nocturnal release of DOC by BCMs is most likely the result of anaerobic metabolism and degradation processes, as shown by high respiration rates at the mat surface during nighttime. We conclude that BCMs are significant sources of DOC. Their increased abundance on coral reefs will lead to increased DOC release into the water column, which is likely to have negative implications for reef health.

Nickel and ocean warming affect scleractinian coral growth.

PubMed

Biscéré, T; Lorrain, A; Rodolfo-Metalpa, R; Gilbert, A; Wright, A; Devissi, C; Peignon, C; Farman, R; Duvieilbourg, E; Payri, C; Houlbrèque, F

2017-07-15

The sensitivity of corals and their Symbiodinium to warming has been extensively documented; however very few studies considered that anthropogenic inputs such as metal pollution have already an impact on many fringing reefs. Thus, today, nickel releases are common in coastal ecosystems. In this study, two major reef-building species Acropora muricata and Pocillopora damicornis were exposed in situ to ambient and moderate nickel concentrations on a short-term period (1h) using benthic chamber experiments. Simultaneously, we tested in laboratory conditions the combined effects of a chronic exposure (8weeks) to moderate nickel concentrations and ocean warming on A. muricata. The in situ experiment highlighted that nickel enrichment, at ambient temperature, stimulated by 27 to 47% the calcification rates of both species but not their photosynthetic performances. In contrast, an exposure to higher nickel concentration, in combination with elevated temperature simulated in aquaria, severely depressed by 30% the growth of A. muricata. Copyright © 2017 Elsevier Ltd. All rights reserved.

Foraminiferal single chamber analyses of heavy metals as a tool for monitoring permanent and short term anthropogenic footprints.

PubMed

Titelboim, Danna; Sadekov, Aleksey; Hyams-Kaphzan, Orit; Almogi-Labin, Ahuva; Herut, Barak; Kucera, Michal; Abramovich, Sigal

2018-03-01

In order to establish environmentally sustainable industries there is a need for high-resolution temporal and spatial monitoring of heavy metal pollutants even at low concentrations before they become hazardous for local ecosystems. Here we present single chamber records of Cu, Zn and Pb in shells of two benthic foraminifera species with different shell types from two shallow coastal stations in Israel: An area adjacent to an electrical power plant and desalination factory (Hadera) and an industrially free nature reserve (Nachsholim). Records of both foraminifera species show elevated metal concentrations in Hadera clearly identifying the footprint of the local industrial facilities. Moreover, short-term events of elevated Cu and Pb concentrations were detected by single chamber analyses. This study demonstrates the potential of using heavy metals anomalies in foraminiferal single chambers as a tool for detecting the industrial footprint of coastal facilities as well as short term events of elevated heavy metals. Copyright © 2018 Elsevier Ltd. All rights reserved.

The Power of Computer-aided Tomography to Investigate Marine Benthic Communities

EPA Science Inventory

Utilization of Computer-aided-Tomography (CT) technology is a powerful tool to investigate benthic communities in aquatic systems. In this presentation, we will attempt to summarize our 15 years of experience in developing specific CT methods and applications to marine benthic co...

Interpreting the role of pH on stable isotopes in large benthic foraminifera

USGS Publications Warehouse

Robbins, Lisa L.; Knorr, P.O.; Wynn, J.G.; Hallock, P.; Harries, P.

2016-01-01

Large benthic foraminifera (LBF) are prolific producers of calcium carbonate sediments in shallow, tropical environments that are being influenced by ocean acidification (OA). Two LBF species, Amphistegina gibbosa (Order Rotaliida) with low-Mg calcite tests and Archaias angulatus (Order Miliolida) with high-Mg calcite tests, were studied to assess the effects of pH 7.6 on oxygen and carbon isotopic fractionation between test calcite and ambient seawater. The δ18O and δ13C values of terminal chambers and of whole adult tests of both species after 6 weeks were not significantly different between pH treatments of 8.0 and 7.6. However, tests of juveniles produced during the 6-week treatments showed significant differences between δ18O and δ13C values from control (pH 8.0) when compared with the treatment (pH 7.6) for both species. Although each individual's growth was photographed and measured, difficulty in distinguishing and manually extracting newly precipitated calcite from adult specimens likely confounded any differences in isotopic signals. However, juvenile specimens that resulted from asexual reproduction that occurred during the experiments did not contain old carbonate that could confound the new isotopic signals. These data reveal a potential bias in the design of OA experiments if only adults are used to investigate changes in test chemistries. Furthermore, the results reaffirm that different calcification mechanisms in these two foraminiferal orders control the fractionation of stable isotopes in the tests and will reflect decreasing pH in seawater somewhat differently. .

Herbivorous snails can increase water clarity by stimulating growth of benthic algae.

PubMed

Zhang, Xiufeng; Taylor, William D; Rudstam, Lars G

2017-11-01

Eutrophication in shallow lakes is characterized by a switch from benthic to pelagic dominance of primary productivity that leads to turbid water, while benthification is characterized by a shift in primary production from the pelagic zone to the benthos associated with clear water. A 12-week mesocosm experiment tested the hypothesis that the herbivorous snail Bellamya aeruginosa stimulates the growth of pelagic algae through grazing on benthic algae and through accelerating nutrient release from sediment. A tube-microcosm experiment using 32 P-PO 4 as a tracer tested the effects of the snails on the release of sediment phosphorus (P). The mesocosm experiment recorded greater total nitrogen (TN) concentrations and a higher ratio of TN:TP in the overlying water, and a higher light intensity and biomass of benthic algae as measured by chlorophyll a (Chl a) in the snail treatment than in the control. Concentrations of total phosphorus (TP), total suspended solids (TSSs), and inorganic suspended solids (ISSs) in the overlying water were lower in the snail treatment than in the control, though no significant difference in Chl a of pelagic algae between the snail treatment and control was observed. In the microcosm experiment, 32 P activity in the overlying water was higher in the snail treatment than in the control, indicating that snails accelerated P release from the sediment. Our interpretation of these results is that snails enhanced growth of benthic algae and thereby improved water clarity despite grazing on the benthic algae and enhancing P release from the sediment. The rehabilitation of native snail populations may therefore enhance the recovery of eutrophic shallow lakes to a clear water state by stimulating growth of benthic algae.

Novel benthic foraminifera are abundant and diverse in an area of the abyssal equatorial Pacific licensed for polymetallic nodule exploration

NASA Astrophysics Data System (ADS)

Goineau, Aurélie; Gooday, Andrew J.

2017-04-01

The benthic biota of the Clarion-Clipperton Zone (CCZ, abyssal eastern equatorial Pacific) is the focus of a major research effort linked to possible future mining of polymetallic nodules. Within the framework of ABYSSLINE, a biological baseline study conducted on behalf of Seabed Resources Development Ltd. in the UK-1 exploration contract area (eastern CCZ, ~4,080 m water depth), we analysed foraminifera (testate protists), including ‘live’ (Rose Bengal stained) and dead tests, in 5 cores (0-1 cm layer, >150-μm fraction) recovered during separate megacorer deployments inside a 30 by 30 km seafloor area. In both categories (live and dead) we distinguished between complete and fragmented specimens. The outstanding feature of these assemblages is the overwhelming predominance of monothalamids, a group often ignored in foraminiferal studies. These single-chambered foraminifera, which include agglutinated tubes, spheres and komokiaceans, represented 79% of 3,607 complete tests, 98% of 1,798 fragments and 76% of the 416 morphospecies (live and dead combined) in our samples. Only 3.1% of monothalamid species and 9.8% of all species in the UK-1 assemblages are scientifically described and many are rare (29% singletons). Our results emphasise how little is known about foraminifera in abyssal areas that may experience major impacts from future mining activities.

Benthic flux measurements of Hg species in a northern Adriatic lagoon environment (Marano and Grado Lagoon, Italy)

NASA Astrophysics Data System (ADS)

Emili, Andrea; Acquavita, Alessandro; Koron, Neža; Covelli, Stefano; Faganeli, Jadran; Horvat, Milena; Žižek, Suzana; Fajon, Vesna

2012-11-01

As part of the "MIRACLE" project, the biogeochemical cycling of mercury (Hg) at the sediment-water interface was studied in the field in the Marano and Grado Lagoon (Northern Adriatic Sea). Seasonal investigations were conducted at selected experimental sites, where Manila Clams (Tapes philippinarum) were previously seeded. Measurements were performed seasonally during three campaigns, using two benthic chambers, one transparent and one dark, to evaluate the effect of light on Hg cycling. Total dissolved Hg (THg), methylmercury (MeHg), and dissolved gaseous Hg (DGM) species were considered. Diurnal benthic fluxes were found to significantly exceed the diffusive fluxes at all stations. The assessment of the annual recycling of Hg species from sediments to the water column showed that up to 99% of MeHg is recycled annually to the water column, while Hg recycling ranges from 30 to 60%. MeHg poses the higher risk for potential bioaccumulation in clams, but it is partially mitigated by Hg reduction, which seems to be an important process leading to evasion losses of Hg from these environments. Estimated benthic fluxes suggest that Hg recycling at the sediment-water interface is more active in the Grado sector. Hence, based on the estimated release of MeHg from sediments, it is suggested that the western sector seems to be more suitable for clam farming and the extension of rearing activities.

Relationship of nutrient dynamics and bacterial community structure at the water-sediment interface using a benthic chamber experiment.

PubMed

Ki, Bo-Min; Huh, In Ae; Choi, Jung-Hyun; Cho, Kyung-Suk

2018-04-16

The relationships between nutrient dynamics and the bacterial community at the water-sediment interface were investigated using the results of nutrient release fluxes, bacterial communities examined by 16S rRNA pyrosequencing and canonical correlation analysis (CCA) accompanied by lab-scale benthic chamber experiment. The nutrient release fluxes from the sediments into the water were as follows: -3.832 to 12.157 mg m -2 d -1 for total phosphorus, 0.049 to 9.993 mg m -2 d -1 for PO 4 -P, -2.011 to 41.699 mg m -2 d -1 for total nitrogen, -7.915 to -0.074 mg m -2 d -1 for NH 3 -N, and -17.940 to 1.209 mg m -2 d -1 for NO 3 -N. To evaluate the relationship between the bacterial communities and environmental variables, CCA was conducted in three representative conditions: in the overlying water, in the sediment at a depth of 0-5 cm, and in the sediment at a depth of 5-15 cm. CCA results showed that environmental variables such as nutrient release fluxes (TN, NH 4 , NO 3 , TP, and PO 4 ) and water chemical parameters (pH, DO, COD, and temperature) were highly correlated with the bacterial communities. From the results of the nutrient release fluxes and the bacterial community, this study proposed the hypothesis for bacteria involved in the nutrient dynamics at the interface between water and sediment. In the sediment, sulfate-reducing bacteria (SRB) such as Desulfatibacillum, Desulfobacterium, Desulfomicrobium, and Desulfosalsimonas are expected to contribute to the decomposition of organic matter, and release of ammonia (NH 4 + ) and phosphate (PO 4 3- ). The PO 4 3- released into the water layer was observed by the positive fluxes of PO 4 3- . The NH 4 + released from the sediment was rapidly oxidized by the methane-oxidizing bacteria (MOB). This study observed in the water layer dominantly abundant MOB of Methylobacillus, Methylobacter, Methylocaldum, and Methylophilus. The nitrate (NO 3 - ) accumulation caused by the oxidation environment of the water layer moved back to the sediment, which led to the relatively large negative fluxes of NO 3 - , compared to the small negative fluxes of NH 4 + .

Ocean Microbial Fuel Cell: Power Source and Research Tool for Studying Marine Biogeochemistry

NASA Astrophysics Data System (ADS)

Reimers, C. E.; Girguis, P.; Westall, J. C.; Nielsen, M. E.

2007-05-01

Ocean microbial fuel cells (OMFCs) are devices capable of producing modest levels of electrical power. The cells are ultimately driven by the oxidation of marine organic matter at the anode and reduction of dissolved oxygen at the cathode, but microbial transformations and electrochemically active intermediates play important roles in the overall process of electricity generation. By separating the factors that affect the performance of OMFCs into components of an equivalent circuit and manipulating these factors in laboratory and field experiments, we are gaining new insight into how specific redox reactions, sources of organic matter, and mass transport at small and intermediate scales may enrich environments with certain groups of microorganisms that in turn regulate anaerobic organic matter degradation. This talk will illustrate these relationships with the results from at least four experiments in which either fresh plankton, or substrates within continental margin sediments, fuelled the OMFCs. In each example, reduced sulfur compounds were found to be major electron carriers to the fuel cell anode. These intermediates came from a variety of sources including sulfide generated from sulfate reduction in mixed solutions surrounding the electrode, sulfide generated distally but transported by pore-water diffusion and advection, iron monosulfides and pyrite present is a sediment matrix centimeters from the electrode, and sulfide or polysulfide produced within an electrode biofilm. To illustrate a practical application of an OMFC, we are currently constructing a benthic cell that will power a sonic receiver in a network of underwater sensors. The form of this OMFC resembles a benthic chamber with a footprint of one square meter. It should be capable of supplying electrical power and regulating its output for years to decades.

Effects of N and P enrichment on competition between phytoplankton and benthic algae in shallow lakes: a mesocosm study.

PubMed

Zhang, Xiufeng; Mei, Xueying; Gulati, Ramesh D; Liu, Zhengwen

2015-03-01

Competition for resources between coexisting phytoplankton and benthic algae, but with different habitats and roles in functioning of lake ecosystems, profoundly affects dynamics of shallow lakes in the process of eutrophication. An experiment was conducted to test the hypothesis that combined enrichment with nitrogen (N) and phosphorus (P) would be a greater benefit to phytoplankton than benthic algae. The growth of phytoplankton and benthic algae was measured as chlorophyll a (Chl a) in 12 shallow aquatic mesocosms supplemented with N, P, or both. We found that enrichment with N enhanced growth of benthic algae, but not phytoplankton. P enrichment had a negative effect on benthic algal growth, and no effect on the growth of phytoplankton. N+P enrichment had a negative effect on benthic algae, but enhanced the growth of phytoplankton, thus reducing the proportion of benthic algae contributing to the combined biomass of these two groups of primary producers. Thus, combined N+P enrichment is more favorable to phytoplankton in competition with benthic algae than enrichment with either N or P alone. Our study indicates that combined enrichment with N+P promotes the dominance of phytoplankton over benthic algae, with consequences for the trophic dynamics of shallow lake ecosystems.

Swept Away: Resuspension of Bacterial Mats Regulates Benthic-Pelagic Exchange of Sulfur

NASA Astrophysics Data System (ADS)

Grant, Jonathan; Bathmann, Ulrich V.

1987-06-01

Filaments and extracellular material from colorless sulfur bacteria (Beggiatoa spp.) form extensive white sulfur mats on surface sediments of coastal, oceanic, and even deep-sea environments. These chemoautotrophic bacteria oxidize soluble reduced sulfur compounds and deposit elemental sulfur, enriching the sulfur content of surface sediment fivefold over that of deeper sediments. Laboratory flume experiments with Beggiatoa mats from an intertidal sandflat (Nova Scotia) demonstrated that even slight erosion of sediment causes a flux of 160 millimoles of sulfur per square meter per hour, two orders of magnitude greater than the flux produced by sulfur transformations involving either sulfate reduction or sulfide oxidation by benthic bacteria. These experiments indicate that resuspension of sulfur bacterial mats by waves and currents is a rapid mechanism by which sediment sulfur is recycled to the water column. Benthic communities thus lose an important storage intermediate for reduced sulfur as well as a high-quality bacterial food source for benthic grazers.

Mn/Ca intra- and inter-test variability in the benthic foraminifer Ammonia tepida

NASA Astrophysics Data System (ADS)

Petersen, Jassin; Barras, Christine; Bézos, Antoine; La, Carole; de Nooijer, Lennart J.; Meysman, Filip J. R.; Mouret, Aurélia; Slomp, Caroline P.; Jorissen, Frans J.

2018-01-01

The adaptation of some benthic foraminiferal species to low-oxygen conditions provides the prospect of using the chemical composition of their tests as proxies for bottom water oxygenation. Manganese may be particularly suitable as such a geochemical proxy because this redox element is soluble in reduced form (Mn2+) and hence can be incorporated into benthic foraminiferal tests under low-oxygen conditions. Therefore, intra- and inter-test differences in foraminiferal Mn/Ca ratios may hold important information about short-term variability in pore water Mn2+ concentrations and sediment redox conditions. Here, we studied Mn/Ca intra- and inter-test variability in living individuals of the shallow infaunal foraminifer Ammonia tepida sampled in Lake Grevelingen (the Netherlands) in three different months of 2012. The deeper parts of this lake are characterized by seasonal hypoxia/anoxia with associated shifts in microbial activity and sediment geochemistry, leading to seasonal Mn2+ accumulation in the pore water. Earlier laboratory experiments with similar seawater Mn2+ concentrations as encountered in the pore waters of Lake Grevelingen suggest that intra-test variability due to ontogenetic trends (i.e. size-related effects) and/or other vital effects occurring during calcification in A. tepida (11-25 % relative SD, RSD) is responsible for part of the observed variability in Mn/Ca. Our present results show that the seasonally highly dynamic environmental conditions in the study area lead to a strongly increased Mn/Ca intra- and inter-test variability (average of 45 % RSD). Within single specimens, both increasing and decreasing trends in Mn/Ca ratios with size are observed. Our results suggest that the variability in successive single-chamber Mn/Ca ratios reflects the temporal variability in pore water Mn2+. Additionally, active or passive migration of the foraminifera in the surface sediment may explain part of the observed Mn/Ca variability.

Fissumella motolae new genus new species from the late Aptian-early Albian of Southern Italy

NASA Astrophysics Data System (ADS)

Cruz, Erzika; Consorti, Lorenzo; Di Lucia, Matteo; Parente, Mariano; Ciria, Alex; Caus, Esmeralda

2016-04-01

Benthic foraminifera, together with calcareous algae and rudist bivalves, play a key role in the biostratigraphy of Cretaceous carbonate platforms of the peri-Adriatic area. In the biozonation currently adopted for the carbonate platforms of central and southern Apennines (Italy) there is a stratigraphic interval, roughly corresponding to most of the Albian stage, which is poorly defined and assigned to a single biozone, called "Ostracoda and Miliolidae" biozone (Chiocchini et al., 2008). We describe here a new peneropliform benthic foraminifer, Fissumella motolae n. gen., n. sp. which could be used for a finer biostratigraphic subdivision of this interval. Its porcelaneous test shows a peneropliform shape with rounded margins. In the early stage of growth the chambers are streptospirally arranged, becoming later planispiral involute. The aperture is single, migrating during ontogeny from an interiomarginal position to the center of septa. The chamber lumina are traversed by few and short radial septula. Fissumella motolae is a common constituent of benthic foraminiferal assemblages of the Apennine Carbonate Platform. We have found it in the same stratigraphic interval in several stratigraphic sections distributed along a NW-SE transect from Monte Croce (in the Aurunci Mts.) to Monte Tobenna (in the Picentini Mts.) to Monte Motola (in the Cilento Promontory). It first appears in the levels with Archaeoalveolina reicheli, close to Aptian-Albian boundary, and then continues for some tens of meters, associated with Praechrysalidina infracretacea, Cuneolina parva, Sabaudia minuta, conical imperforate foraminifers, miliolids, textularids, nezzazzatids, dasycladalean green algae and ostracods. Carbon isotope stratigraphy has been used to better constrain the correlation between the studied sections and their chronostratigraphic calibration. Chiocchini, M., Chiocchini, R. A., Didaskalou, P., and Potetti, M., 2008. Microbiostratigrafia del Triassico superiore, Giurassico e Cretacico in facies di piattaforma carbonatica del Lazio centro- meridionale e Abruzzo: revisione finale, Mem. Descr. Carta Geol. d' It., 5-170.

Three dimensional morphological studies of Larger Benthic Foraminifera at the population level using micro computed tomography

NASA Astrophysics Data System (ADS)

Kinoshita, Shunichi; Eder, Wolfgang; Woeger, Julia; Hohenegger, Johann; Briguglio, Antonino; Ferrandez-Canadell, Carles

2015-04-01

Symbiont-bearing larger benthic Foraminifera (LBF) are long-living marine (at least 1 year), single-celled organisms with complex calcium carbonate shells. Their morphology has been intensively studied since the middle of the nineteenth century. This led to a broad spectrum of taxonomic results, important from biostratigraphy to ecology in shallow water tropical to warm temperate marine palaeo-environments. However, it was necessary for the traditional investigation methods to cut or destruct specimens for analysing the taxonomically important inner structures. X-ray micro-computed tomography (microCT) is one of the newest techniques used in morphological studies. The greatest advantage is the non-destructive acquisition of inner structures. Furthermore, the running improve of microCT scanners' hard- and software provides high resolution and short time scans well-suited for LBF. Three-dimensional imaging techniques allow to select and extract each chamber and to measure easily its volume, surface and several form parameters used for morphometric analyses. Thus, 3-dimensional visualisation of LBF-tests is a very big step forward from traditional morphology based on 2-dimensional data. The quantification of chamber form is a great opportunity to tackle LBF structures, architectures and the bauplan geometry. The micrometric digital resolution is the only way to solve many controversies in phylogeny and evolutionary trends of LBF. For the present study we used micro-computed tomography to easily investigate the chamber number of every specimen from statistically representative part of populations to estimate population dynamics. Samples of living individuals are collected at monthly intervals from fixed locations. Specific preparation allows to scan up to 35 specimens per scan within 2 hours and to obtain the complete digital dataset for each specimen of the population. MicroCT enables thus a fast and precise count of all chambers built by the foraminifer from its birth until the time of collection and to extract selected chambers for further studies. The variation in chamber number during the sampling period (in this study limited at 15 months) will allow the estimation of the mean chamber building rate for each investigated species. However, a number of morphological aberrations within the population can be observed: often multiple proloculi are present; their orientation to the equatorial plane (or planes) respectively the spatial position of the foramina between proloculus (or proloculi) to the reniform deuteroloculi, the geometry of septa and septula and their variation trough ontogeny and several other ontogenetic variation need further attention. Many new insights into the biology of living and fossil LBF will be obtained when the three dimensional morphology of the complete foraminiferal shell is raised to the population level.

Benthic fluxes in San Francisco Bay

USGS Publications Warehouse

Hammond, Douglas E.; Fuller, C.; Harmon, D.; Hartman, Blayne; Korosec, M.; Miller, L.G.; Rea, R.; Warren, S.; Berelson, W.; Hager, S.W.

1985-01-01

Measurements of benthic fluxes have been made on four occasions between February 1980 and February 1981 at a channel station and a shoal station in South San Francisco Bay, using in situ flux chambers. On each occasion replicate measurements of easily measured substances such as radon, oxygen, ammonia, and silica showed a variability (??1??) of 30% or more over distances of a few meters to tens of meters, presumably due to spatial heterogeneity in the benthic community. Fluxes of radon were greater at the shoal station than at the channel station because of greater macrofaunal irrigation at the former, but showed little seasonal variability at either station. At both stations fluxes of oxygen, carbon dioxide, ammonia, and silica were largest following the spring bloom. Fluxes measured during different seasons ranged over factors of 2-3, 3, 4-5, and 3-10 (respectively), due to variations in phytoplankton productivity and temperature. Fluxes of oxygen and carbon dioxide were greater at the shoal station than at the channel station because the net phytoplankton productivity is greater there and the organic matter produced must be rapidly incorporated in the sediment column. Fluxes of silica were greater at the shoal station, probably because of the greater irrigation rates there. N + N (nitrate + nitrite) fluxes were variable in magnitude and in sign. Phosphate fluxes were too small to measure accurately. Alkalinity fluxes were similar at the two stations and are attributed primarily to carbonate dissolution at the shoal station and to sulfate reduction at the channel station. The estimated average fluxes into South Bay, based on results from these two stations over the course of a year, are (in mmol m-2 d-1): O2 = -27 ?? 6; TCO2 = 23 ?? 6; Alkalinity = 9 ?? 2; N + N = -0.3 ?? 0.5; NH3 = 1.4 ?? 0.2; PO4 = 0.1 ?? 0.4; Si = 5.6 ?? 1.1. These fluxes are comparable in magnitude to those in other temperate estuaries with similar productivity, although the seasonal variability is smaller, probably because the annual temperature range in San Francisco Bay is smaller. Budgets constructed for South San Francisco Bay show that large fractions of the net annual productivity of carbon (about 90%) and silica (about 65%) are recycled by the benthos. Substantial rates of simultaneous nitrification and denitrification must occur in shoal areas, apparently resulting in conversion to N2 of 55% of the particulate nitrogen reaching the sediments. In shoal areas, benthic fluxes can replace the water column standing stocks of ammonia in 2-6 days and silica in 17-34 days, indicating the importance of benthic fluxes in the maintenance of productivity. Pore water profiles of nutrients and Rn-222 show that macrofaunal irrigation is extremely important in transport of silica, ammonia, and alkalinity. Calculations of benthic fluxes from these profiles are less accurate, but yield results consistent with chamber measurements and indicate that most of the NH3, SiO2, and alkalinity fluxes are sustained by reactions occurring throughout the upper 20-40 cm of the sediment column. In contrast, O2, CO2, and N + N fluxes must be dominated by reactions occurring within the upper one cm of the sediment-water interface. While most data support the statements made above, a few flux measurements are contradictory and demonstrate the complexity of benthic exchange. ?? 1985 Dr W. Junk Publishers.

Sustained in situ measurements of dissolved oxygen, methane and water transport processes in the benthic boundary layer at MC118, northern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Martens, Christopher S.; Mendlovitz, Howard P.; Seim, Harvey; Lapham, Laura; D'Emidio, Marco

2016-07-01

Within months of the BP Macondo Wellhead blowout, elevated methane concentrations within the water column revealed a significant retention of light hydrocarbons in deep waters plus corresponding dissolved oxygen (DO) deficits. However, chemical plume tracking efforts were hindered by a lack of in situ monitoring capabilities. Here, we describe results from in situ time-series, lander-based investigations of physical and biogeochemical processes controlling dissolved oxygen, and methane at Mississippi Canyon lease block 118 ( 18 km from the oil spill) conducted shortly after the blowout through April 2012. Multiple sensor arrays plus open-cylinder flux chambers (;chimneys;) deployed from a benthic lander collected oxygen, methane, pressure, and current speed and direction data within one meter of the seafloor. The ROVARD lander system was deployed for an initial 21-day test experiment (9/13/2010-10/04/2010) at 882 m depth before a longer 160-day deployment (10/24/2011-4/01/2012) at 884 m depth. Temporal variability in current directions and velocities and water temperatures revealed strong influences of bathymetrically steered currents and overlying along-shelf flows on local and regional water transport processes. DO concentrations and temperature were inversely correlated as a result of water mass mixing processes. Flux chamber measurements during the 160-day deployment revealed total oxygen utilization (TOU) averaging 11.6 mmol/m2 day. Chimney DO concentrations measured during the 21-day deployment exhibited quasi-daily variations apparently resulting from an interaction between near inertial waves and the steep topography of an elevated scarp immediately adjacent to the 21-day deployment site that modulated currents at the top of the chimney. Variability in dissolved methane concentrations suggested significant temporal variability in gas release from nearby hydrocarbon seeps and/or delivery by local water transport processes. Free-vehicle (lander) monitoring over time scales of months to years utilizing in situ sensors can provide an understanding of processes controlling water transport, respiration and the fate and impacts of accidental and natural gas and oil releases.

Evaluating ecosystem-based management options: Effects of trawling in Torres Strait, Australia

NASA Astrophysics Data System (ADS)

Ellis, Nick; Pantus, Francis; Welna, Andrzej; Butler, Alan

2008-09-01

A suite of management options for a prawn trawl fishery in Torres Strait, Australia was assessed for impacts on the benthic fauna using a dynamic management strategy evaluation approach. The specification of the management options was gained through consultation with stakeholders. Data for the model was drawn from several sources: the fleet data from fishery logbooks and satellite vessel monitoring systems, benthic depletion rates from trawl-down experiments, benthic recovery rates from post-experiment recovery monitoring studies, and benthic distribution from large-scale benthic surveys. Although there were large uncertainties in the resulting indicators, robust measures relevant to management were obtained by taking ratios relative to the status quo. The management control with the biggest effect was total effort; reducing trawl effort always led to increases in benthic faunal density of up to 10%. Spatial closures had a smaller benefit of up to 2%. The effect of closing a set of buffer zones around reefs to trawling was indistinguishable from the status quo option. Closing a larger area, however, was largely beneficial especially for sea cucumbers. When the spatial distributions of fauna prior to fishing were accounted for, fauna with distributions positively correlated with effort improved relative to those negatively correlated. The reduction in prawn catch under effort reduction scenarios could be ameliorated by introducing temporal closures over the full-moon period.

Morphological deformities of benthic foraminifera in response to nearshore pollution of the Red Sea, Egypt.

PubMed

El-Kahawy, R; El-Shafeiy, M; Helal, S A; Aboul-Ela, N; El-Wahab, M Abd

2018-04-28

The Red Sea encompasses a wide range of tropical marine habitats that are stressed due to anthropogenic activities. The main anthropogenic activities are hydrocarbon exploration and important trading harbors. This work aims to assess the influence of the Red Sea coastal heavy metal contamination on the marine meiofauna along three sites (Ras Gharib, Safaga, and Quseir). Eight heavy metal (Cu, Cd, Zn, Pb, Cr, Co, Ni, and Mn) contents are considered in four benthic foraminiferal species (Elphidium striatopunctatum, Amphistegina lobifera, Amphisorus hemprichii, and Ammonia beccarii). Quseir Harbor showed the highest level of pollution followed by Safaga and Ras Gharib sites. The analyzed benthic foraminiferal tests displayed noteworthy high concentrations of Cd, Zn, and Pb in Quseir Harbor which could be attributed to the anthropogenic activities in the nearshore areas. Some foraminiferal tests exhibited abnormalities in their apertures, coiling, and shape of chambers. A comparison between normal and deformed foraminiferal tests revealed that the deformed ones are highly contaminated with elevated heavy metal contents such as Fe, Mn, Ni, and Cd. Statistics in addition to geo-accumulation and pollution load indices reveal a whistling alarm for the Quseir harbor. The present data are necessary to improve conservation and management of the Red Sea ecosystem in the near future.

Utilization of natural and supplemental biofuels for harvesting energy from marine sediments

NASA Astrophysics Data System (ADS)

Nielsen, Mark E.

A benthic microbial fuel cell (BMFC) is an electrochemical device that generates current from the redox gradient at the sediment-water interface. Early prototypes had anodes buried in anoxic sediments and cathodes in overlying water. The BMFCs described in this dissertation are based on a chamber design that enables the use of high surface-area fiber electrodes and facilitates enhanced mass transport to the anode. Results from Yaquina Bay, OR, show that mass transport resistance accounted for at least 93% of the total internal resistance for a particular BMFC configuration. Power output was increased 18-fold by mechanically induced fluid transport through the anode chamber. At a cold seep in Monterey Canyon, CA, naturally driven advection resulted in a five-fold increase in power from a BMFC with low-pressure check valves relative to an identical BMFC with high-pressure check valves. Enhanced transport coincided with a change in the microbial community on the anode from one dominated by epsilonproteobacteria to one with relatively even representation from deltaproteobacteria, epsilonproteobacteria, firmicutes and flavobacterium/cytophaga/bacterioides. Laboratory experiments investigated the effect of adding supplemental carbon sources to anode chambers. Repeated lactate injections appeared to stimulate sulfate reduction resulting in short term power gains but did not apparently shift the process responsible for baseline current. When a specific inhibitor of sulfate reduction was added, lactate-supplemented and unsupplemented BMFCs performed similarly. BMFCs have been proposed as power sources for monitoring systems in remote locations. Practical implementation of this technology is governed by three conditions: (1) low-voltage current must be stepped up to meet the requirements of off-the-shelf electronic devices, (2) modest power production and variable power demands require integrated energy storage, and (3) BMFCs should be operated at the most efficient potential for energy production. A combination power converter/potentiostat/rechargeable battery system was described based on these considerations and tested with a chambered BMFC in Yaquina Bay, OR. The BMFC provided intermittent power to an acoustic receiver, and results highlight the need to increase power, make design improvements to better seal the chamber to the sediment and increase the capacity for energy storage.

The "Flexi-Chamber": A Novel Cost-Effective In Situ Respirometry Chamber for Coral Physiological Measurements.

PubMed

Camp, Emma F; Krause, Sophie-Louise; Santos, Lourianne M F; Naumann, Malik S; Kikuchi, Ruy K P; Smith, David J; Wild, Christian; Suggett, David J

2015-01-01

Coral reefs are threatened worldwide, with environmental stressors increasingly affecting the ability of reef-building corals to sustain growth from calcification (G), photosynthesis (P) and respiration (R). These processes support the foundation of coral reefs by directly influencing biogeochemical nutrient cycles and complex ecological interactions and therefore represent key knowledge required for effective reef management. However, metabolic rates are not trivial to quantify and typically rely on the use of cumbersome in situ respirometry chambers and/or the need to remove material and examine ex situ, thereby fundamentally limiting the scale, resolution and possibly the accuracy of the rate data. Here we describe a novel low-cost in situ respirometry bag that mitigates many constraints of traditional glass and plexi-glass incubation chambers. We subsequently demonstrate the effectiveness of our novel "Flexi-Chamber" approach via two case studies: 1) the Flexi-Chamber provides values of P, R and G for the reef-building coral Siderastrea cf. stellata collected from reefs close to Salvador, Brazil, which were statistically similar to values collected from a traditional glass respirometry vessel; and 2) wide-scale application of obtaining P, R and G rates for different species across different habitats to obtain inter- and intra-species differences. Our novel cost-effective design allows us to increase sampling scale of metabolic rate measurements in situ without the need for destructive sampling and thus significantly expands on existing research potential, not only for corals as we have demonstrated here, but also other important benthic groups.

Northern Florida reef tract benthic metabolism scaled by remote sensing

USGS Publications Warehouse

Brock, J.C.; Yates, K.K.; Halley, R.B.; Kuffner, I.B.; Wright, C.W.; Hatcher, B.G.

2006-01-01

Holistic rates of excess organic carbon production (E) and calcification for a 0.5 km2 segment of the backreef platform of the northern Florida reef tract (NFRT) were estimated by combining biotope mapping using remote sensing with community metabolic rates determined with a benthic incubation system. The use of ASTER multispectral satellite imaging for the spatial scaling of benthic metabolic processes resulted in errors in E and net calcification (G) of 48 and 431% respectively, relative to estimates obtained using AISA hyperspectral airborne scanning. At 19 and 125%, the E and G errors relative to the AISA-based estimates were less pronounced for an analysis that used IKONOS multispectral satellite imagery to spatially extrapolate the chamber process measurements. Our scaling analysis indicates that the holistic calcification rate of the backreef platform of the northern Florida reef tract is negligible at 0.07 g CaCO3 m-2 d-1. All of the mapped biotopes in this reef zone are net heterotrophic, resulting in an estimated holistic excess production rate of -0.56 g C m-2 d-1, and an overall gross primary production to respiration ratio of 0.85. Based on our finding of ubiquitous heterotrophy, we infer that the backreef platform of the NFRT is a sink for external inputs of suspended particulate organic matter. Further, our results suggest that the inward advection of inorganic nutrients is not a dominant forcing mechanism for benthic biogeochemical function in the NFRT. We suggest that the degradation of the northern Florida reef tract may parallel the community phase shifts documented within other reef systems polluted by organic detritus.

Environmental factors controlling benthic foraminiferal distribution in Hurghada area, Red Sea coast, Egypt

NASA Astrophysics Data System (ADS)

Mounir El-Kahawy, Ramadan; El-Wahab, Mohamed Abd

2017-04-01

Benthic foraminiferal assemblages were investigated at Hurghada on the Red Sea coast of Egypt, to determine the distribution and their common environmental factors that control on this distribution. 43 sediment samples were collected and environmental factors (T°C, pH, and salinity ‰), water depth, grain size, organic matter and carbonate content were measured. Faunal abundance (14-1755 tests/g) with an average 709 tests/g, and faunal diversity (6-39 specimens) with an average 31 specimen. Cluster analysis was divided the Hurghada site into four distinct biotopes based on the faunal data: Biotope (1) is dominated by a Quinqueloculina seminula& Quinqueloculina laevigata, and Triloculina terquemiana assemblage. Biotope (2) is dominated by a Sorites marginalis & Triloculina trigonula assemblage. Biotope (3) is dominated by an Amphistegina lessonii, Ammonia beccarii and Elphidium spp assemblage. Biotope (4) is dominated by a Peneroplis planatus& Coscinospira hemprichii& Sorites orbiculus and Neorotalia calcar assemblage. Some of the recorded foraminiferal tests showed abnormalities in their apertures, coiling and shape of chambers. The distribution of benthic foraminiferal species is governed by environmental factors such as salinity, temperature, substrates-type, water depth and pH. P. planatus and C. hemprichii positively correlate with extreme salinity and temperature, indicating that these species reflect a warm, arid climate conditions. Aside, the heavy metals (Cu, Cd, Zn, Pb, Ni and Mn) concentrations in the sediment samples were analyzed using ICP-OES. The comparative study between the faunal content and the heavy metals enrichments in each sample displayed positive character indicating the worsening of the environmental conditions. Keywords: benthic foraminifera, Hurghada, Red Sea, Egypt

Low dissolved oxygen and its impact on benthic assemblages and ecosystem function in the Northern Adriatic Sea - an experimental approach

NASA Astrophysics Data System (ADS)

Riedel, Bettina; Stachowitsch, Michael; Zuschin, Martin

2010-05-01

No other environmental parameter in shallow coastal ecosystems worldwide has changed as dramatically as dissolved oxygen (DO). Nearly 400 hypoxic (<2 ml l-1) and anoxic areas have been identified and the number is expected to increase. Such "dead zones" cause cascading effects from the molecular to the ecosystem level. Ultimately, biodiversity loss and disrupted ecosystem function (e.g. filter- and suspension-feeding capacity, bioturbation) can change structurally complex and diverse benthic and pelagic communities into far simpler, depauperated ones (homogenization). The Northern Adriatic Sea is a recognized case study for repeated seasonal low DO events. The onset and extent of catastrophic events, however, is difficult to predict, hindering full documentation in the field. Present knowledge about the behavioural responses and mortalities of benthic organisms is not commensurate with the crucial role this fauna plays in coastal ecosystems. Our research strives to learn about system function by studying system dysfunction Using a specially developed underwater-chamber (EAGU) - equipped with camera, flashes and a sensor array - we experimentally recreate small-scale anoxias in a community setting. In a first project we focused on the well-developed macroepifauna in the Gulf of Trieste, Northern Adriatic. The in situ experiments successfully mimicked full-scale low DO events and revealed a clear sequence of species-specific behaviours and mortalities correlated to specific oxygen thresholds. The present project will incorporate key representatives of the macroinfauna and meiofauna and will include sediment geochemistry. We will also take the EAGU concept one step further by evaluating post-anoxia developments such as decomposition, scavenging/predation and the recovery of the benthos as a whole. This yield of new details (e.g. never observed behaviours and interactions, i.e. predator-prey interactions), at a finer and more nuanced scale of resolution than ever before, is an important step forward in compiling a broadly applicable catalogue of sensitive and more tolerant species. This will also help evaluate community status, i.e. retrospectively pinpoint past anoxias and predict future community compositions. This also calls for examining both the short- and longer-term recolonization process. Finally, our experiments will help to help to better understand and interpret anoxia and dysoxia on epicontinental seas in the fossil record.

Impact of the temporal variation of oxygen contents in the water column on the biogeochemistry of the benthic zone

NASA Astrophysics Data System (ADS)

Rigaud, Sylvain; Deflandre, Bruno; Grenz, Christian; Pozzato, Lara; Cesbron, Florian; Meulé, Samuel; Bonin, Patricia; Michotey, Valérie; Mirleau, Pascal; Mirleau, Fatma; Knoery, Joel; Zuberer, Frédéric; Guillemain, Dorian; Marguerite, Sébatien; Mayot, Nicolas; Faure, Vincent; Grisel, Raphael; Radakovitch, Olivier

2017-04-01

The desoxygenation of the water column in coastal areas, refered as coastal hypoxia, is currently a growing phenomenon still particularly complex to predict. This is mainly due to the fact that the biogeochemical response of the benthic ecosystem to the variation of the oxygen contents in the water column remains poorly understood. Dissolved oxygen concentration is a key parameter controling the benthic micro- and macro-community as well as the biogeochemical reactions occuring in the surface sediment. More particularly, the variation over variable time scales (from hour to years) of the oxygen deficit may induce different pathways for biogeochemical processes such as the oxydation of freshly deposited organic matter and nutrients and metals recycling. This results in variable chemical fluxes at the sediment-water interface, that may in turn, support the eutrophication and desoxygenation of the aquatic system. Our study focus on the Berre lagoon, an eutrophicated mediterranean lagoon impacted by hypoxia events in the water column. Three stations, closely located but impacted by contrasted temporal variation of oxygen deficit in the water column were selected: one station with rare oxygen deficit and with functionnal macrofauna community, one station with almost permanent oxygen deficit and no macrofauna community and one intermediate station with seasonnal oxygen deficit and degraded macrofauna community. Each station was surveyed once during a same field survey while the intermediate station was surveyed seasonnaly. For each campaign, we report vertical profiles of the main chemical components (oxygen, nutrients, metals) along the water-column/sediment continuum, with an increased vertical resolution in the benthic zone using a multi-tool approach (high vertical resolution suprabenthic water sampler and microsensors profiler). In addition, total chemical fluxes at the sediment-water interface was obtained using benthic chambers. This dataset was used to evaluate the influence, of the oxygen concentrations (and its short and long-term variations) in the water column on the nature and location of the main biogeochemical reactions occuring in the benthic zone and the resulting fluxes at the sediment-water interface.

NO3 uptake in shallow, oligotrophic, mountain lakes: The influence of elevated NO3 concentrations

USGS Publications Warehouse

Nydick, K.R.; LaFrancois, B.M.; Baron, Jill S.

2004-01-01

Nutrient enrichment experiments were conducted in 1.2-m deep enclosures in 2 shallow, oligotrophic, mountain lakes. 15N-NO3 isotope tracer was used to compare the importance of phytoplankton and benthic compartments (epilithon, surface sediment [epipelon], and subsurface sediment) for NO3 uptake under high and low NO3 conditions. NO3 uptake approached saturation in the high-N lake, but not in the low-N lake. The capacity of phytoplankton and benthic compartments to take up NO3 differed among treatments and between lakes, and depended on water-column nutrient conditions and the history of NO3 availability. Phytoplankton productivity responded strongly to addition of limiting nutrients, and NO3 uptake was related to phytoplankton biomass and photosynthesis. However, more NO3 usually was taken up by benthic compartments (57–92% combined) than by phytoplankton, even though the response of benthic algal biomass to nutrient additions was less pronounced than that of phytoplankton and benthic NO3 uptake was unrelated to benthic algal biomass. In the low-N lake where NO3 uptake was unsaturated, C content or % was related to NO3 uptake in benthic substrates, suggesting that heterotrophic bacterial processes could be important in benthic NO3 uptake. These results suggest that phytoplankton are most sensitive to nutrient additions, but benthic processes are important for NO3 uptake in shallow, oligotrophic lakes.

Role of Podostemum certaphyllum Michx. in structuring benthic macroinvertebrate assemblages in southern Appalachian river

Treesearch

John J. Hutchens; J. Bruce Wallance

2004-01-01

Podostemum ceratophyllum Michx. has been associated with extremely high secondary production of benthic macroinvertebrates in open-canopy rapids. We conducted an experiment in the 7th-order Little Tennessee River, North Carolina, to test whether varying amounts of Podostemum influenced macroinvertebrate...

Experimental analysis of the effects of consumer exclusion on recruitment and succession of a coral reef system along a water quality gradient in the Spermonde Archipelago, Indonesia

NASA Astrophysics Data System (ADS)

Plass-Johnson, Jeremiah G.; Heiden, Jasmin P.; Abu, Nur; Lukman, Muhammad; Teichberg, Mirta

2016-03-01

The composition of coral reef benthic communities is strongly affected by variation in water quality and consumer abundance and composition. This is particularly evident in highly populated coastal regions where humans depend on coral reef resources and where terrestrial run-off can change the chemical composition of the water. We tested the effects of grazing pressure and ambient water conditions along an established eutrophication gradient on the recruitment and successional development of benthic communities of the Spermonde Archipelago, Indonesia, through caging experiments with settlement tiles. Within 1 month, benthic community composition of the closest reef to land, near the city of Makassar, was significantly different from other sites further offshore, driven primarily by differences in recruitment of invertebrates or turf algae. In contrast to other caging experiments, consumer exclusion had no effect after 3 months, suggesting that larger, mobile consumers had little effect on the benthic communities of these reefs at all sites. Despite conditions that usually favour macroalgal development, this group was rarely observed on recruitment tiles even after 4 months of consumer exclusion. Furthermore, tiles from both the caged and open treatments retained high proportions of open space indicating the possible role of small-sized or non-fish consumers that were not excluded from the experiment. These results indicate that, unlike many other studies, benthic consumers in the Spermonde Archipelago had little effect on the recruitment and early succession of the reef habitat and that unexamined biota such as mesograzers may be significant in degraded systems.

Coral reef sediment dissolution: Insights from chamber incubations around the globe

NASA Astrophysics Data System (ADS)

Cyronak, T.; Andersson, A. J.; Eyre, B.

2016-02-01

Ocean acidification (OA) is expected to negatively affect the calcium carbonate (CaCO3) budget of coral reefs by decreasing calcification and increasing CaCO3 dissolution rates. Sediments represent the largest reservoir of CaCO3 in coral reefs and form important habitats above and below the hide tide mark. Results from in situ benthic incubations at different coral reef locations around the world (Australia, Tahiti, Bermuda, Cook Islands, and Hawaii) reveal that there is a general trend between bulk seawater aragonite saturation state (Ωar) and net CaCO3 sediment dissolution rates. Experimental incubations also indicate that the ratio of production to respiration (P/R) in the sediments plays a significant role in CaCO3 dissolution, with high P/R ratios potentially offsetting the effects of human induced OA. This is most likely due to benthic microalgae photosynthesizing and consuming CO2, which produces conditions more favourable for CaCO3 precipitation in sediment pore waters. Despite any interactions with benthic organic metabolism, sediment dissolution could be an order of magnitude more sensitive to OA compared to the process of biogenic calcification. Increases in CaCO3 sediment dissolution under predicted CO2 emissions could shift the net ecosystem calcification (NEC) of coral reefs from net CaCO3 precipitating to net dissolving by the end of this century.

Benthic foraminiferal trace metal uptake: a field calibration from the Arabia Sea Oxygen Minimum Zone

NASA Astrophysics Data System (ADS)

Koho, K. A.; Reichart, G.-J.

2012-04-01

The Arabian Sea Oxygen Minimum Zone (OMZ) is sustained by high surface water productivity and relatively weak mid-depth water column ventilation. High primary productivity drives high respiration rates in the water column, causing severe oxygen depletion between ±150-1400 m water depths, with the oxygen concentrations falling below 2 μM in the core of the OMZ. Living (rose Bengal stained) benthic foraminifera were collected at 10-stations, covering a large bottom water oxygen concentration gradient from the Murray Ridge. This sub-marine ridge is located in the open marine environment of the Arabian Sea and thus not affected by large gradients in surface water productivity such as encountered at the continental margins. Since these sites thus receive similar organic fluxes, but are bathed in bottom waters with contrasting oxygen concentrations, pore water profiles mainly reflect bottom water oxygenation. The study sites represent a natural laboratory to investigate the impact of bottom water chemistry on trace metal incorporation in benthic foraminifera. Trace metal analyses by laser ablation ICP-MS allows detailed single chamber measurements of trace metal content, which can be related to in situ pore water geochemistry. Focus of this study is on redox sensitive trace metal (e.g. Mn, U) incorporation into foraminiferal test calcite in relation to pore water oxygen and carbonate chemistry.

Transitional Benthic Boundary Layers and their Influence on Nutrient Flux in Tidal Estuaries

NASA Astrophysics Data System (ADS)

Koetje, K. M.; Foster, D. L.; Lippmann, T. C.; Kalnejais, L. H.

2016-12-01

Quantifying the coupled physical and geochemical processes in the fluid-sediment interface is critical to managing coastal resources. This is of particular importance during times of enhanced hydrodynamic forcing where extreme tide or wind events can have a significant impact on water quality. A combination of field and laboratory experiments were used to examine the relationship between large-scale fluid shear stresses and geochemical fluxes at the fluid-sediment interface in the Great Bay Estuary, New Hampshire. Sediment geochemical measurements paired with flow field observations along estuary-wide transects over several tidal cycles provide nutrient load estimates that can be scaled to represent the whole Bay. Three-dimensional flow field measurements collected using a maneuverable personal watercraft were used to determine the spatial and temporal variability of the shear stress throughout the Bay. High-resolution bottom boundary layer dynamics were observed using a suite of acoustic Doppler current profilers (ADCP) in order to improve the accuracy of diffusive flux estimates by directly measuring the thickness of the benthic boundary layer. Over the 2.5 m tidal range and at water depths ranging from 0.3 m to 1.5 m at mean lower low water, peak mean flows ranged from 0.2 m/s to 1 m/s at the sampling sites. The dominant contribution of hydrodynamic forcing to the Bay is due to tidal flows, which are largely unidirectional during flood tide. Sediment grain size analysis characterized the bed at sampling sites as fine-grained sandy mud (d50 = 47 μm). Sampling during typical tidal flow conditions, a smooth turbulent flow field was observed and the threshold of motion was not exceeded. Along with sediment characterization, porosity profiles and erosion chamber experiments were used to characterize nutrient release. This host of data provides shear stress estimates that can constrain nutrient loads under variable hydrodynamic conditions.

Water-quality, stream-habitat, and biological data for West Fork Double Bayou, Cotton Bayou, and Hackberry Gully, Chambers County, Texas, 2006-07

USGS Publications Warehouse

Brown, Dexter W.; Turco, Michael J.

2009-01-01

The U.S. Geological Survey (USGS), in cooperation with the Houston-Galveston Area Council and the Texas Commission on Environmental Quality, collected water-quality, stream-habitat, and biological data from two sites at West Fork Double Bayou, two sites at Cotton Bayou, and one site at Hackberry Gully in Chambers County, Texas, during July 2006-August 2007. Water-quality data-collection surveys consisted of synoptic 24-hour continuous measurements of water temperature, pH, specific conductance, and dissolved oxygen at the five sites and periodically collected samples at four sites analyzed for several properties and constituents of interest. Stream-habitat data were collected at each of four sites three times during the study. At each site, a representative stream reach was selected and within this reach, five evenly spaced stream transects were determined. At each transect, stream attributes (wetted channel width, water depth, bottom material, instream cover) and riparian attributes (bank slope and erosion potential, width of natural vegetation, type of vegetation, percentage tree canopy) were measured. Benthic macroinvertebrate and fish data were collected from the same reaches identified for habitat evaluation. A total of 2,572 macroinvertebrate individuals were identified from the four reaches; insect taxa were more abundant than non-insect taxa at all reaches. A total of 1,082 fish, representing 30 species and 13 families, were collected across all reaches. Stream-habitat and aquatic biota (benthic macroinvertebrates and fish) were assessed at the four sites to evaluate aquatic life use. Habitat quality index scores generally indicated 'intermediate' aquatic life use at most reaches. Benthic macroinvertebrate metrics scores indicated generally 'intermediate' aquatic life use for the West Fork Double Bayou reaches and generally 'high' aquatic life use for the Cotton Bayou and Hackberry Gully reaches. Index of biotic integrity scores for fish indicated generally 'high' aquatic life use at one West Fork Double Bayou reach; 'intermediate' aquatic life use at the other West Fork Double Bayou reach; and generally 'intermediate' aquatic life use at the Cotton Bayou and Hackberry Gully reaches.

Global reductions in seafloor biomass in response to climate change.

PubMed

Jones, Daniel O B; Yool, Andrew; Wei, Chih-Lin; Henson, Stephanie A; Ruhl, Henry A; Watson, Reg A; Gehlen, Marion

2014-06-01

Seafloor organisms are vital for healthy marine ecosystems, contributing to elemental cycling, benthic remineralization, and ultimately sequestration of carbon. Deep-sea life is primarily reliant on the export flux of particulate organic carbon from the surface ocean for food, but most ocean biogeochemistry models predict global decreases in export flux resulting from 21st century anthropogenically induced warming. Here we show that decadal-to-century scale changes in carbon export associated with climate change lead to an estimated 5.2% decrease in future (2091-2100) global open ocean benthic biomass under RCP8.5 (reduction of 5.2 Mt C) compared with contemporary conditions (2006-2015). Our projections use multi-model mean export flux estimates from eight fully coupled earth system models, which contributed to the Coupled Model Intercomparison Project Phase 5, that have been forced by high and low representative concentration pathways (RCP8.5 and 4.5, respectively). These export flux estimates are used in conjunction with published empirical relationships to predict changes in benthic biomass. The polar oceans and some upwelling areas may experience increases in benthic biomass, but most other regions show decreases, with up to 38% reductions in parts of the northeast Atlantic. Our analysis projects a future ocean with smaller sized infaunal benthos, potentially reducing energy transfer rates though benthic multicellular food webs. More than 80% of potential deep-water biodiversity hotspots known around the world, including canyons, seamounts, and cold-water coral reefs, are projected to experience negative changes in biomass. These major reductions in biomass may lead to widespread change in benthic ecosystems and the functions and services they provide. © 2013 The Authors Global Change Biology Published by John Wiley & Sons Ltd.

Changes in dissolved organic material determine exposure of stream benthic communities to UV-B radiation and heavy metals: Implications for climate change

USGS Publications Warehouse

Clements, W.H.; Brooks, M.L.; Kashian, D.R.; Zuellig, R.E.

2008-01-01

Changes in regional climate in the Rocky Mountains over the next 100 years are expected to have significant effects on biogeochemical cycles and hydrological processes. In particular, decreased discharge and lower stream depth during summer when ultraviolet radiation (UVR) is the highest combined with greater photo-oxidation of dissolved organic materials (DOM) will significantly increase exposure of benthic communities to UVR. Communities in many Rocky Mountain streams are simultaneously exposed to elevated metals from abandoned mines, the toxicity and bioavailability of which are also determined by DOM. We integrated field surveys of 19 streams (21 sites) along a gradient of metal contamination with microcosm and field experiments conducted in Colorado, USA, and New Zealand to investigate the influence of DOM on bioavailability of heavy metals and exposure of benthic communities to UVR. Spatial and seasonal variation in DOM were closely related to stream discharge and significantly influenced heavy metal uptake in benthic organisms. Qualitative and quantitative changes in DOM resulting from exposure to sunlight increased UV-B (290-320nm) penetration and toxicity of heavy metals. Results of microcosm experiments showed that benthic communities from a metal-polluted stream were tolerant of metals, but were more sensitive to UV-B than communities from a reference stream. We speculate that the greater sensitivity of these communities to UV-B resulted from costs associated with metal tolerance. Exclusion of UVR from 12 separate Colorado streams and from outdoor stream microcosms in New Zealand increased the abundance of benthic organisms (mayflies, stoneflies, and caddisflies) by 18% and 54%, respectively. Our findings demonstrate the importance of considering changes in regional climate and UV-B exposure when assessing the effects of local anthropogenic stressors. ?? Journal compilation ?? 2008 Blackwell Publishing.

Growth, chamber building rate and reproduction time of Palaeonummulites venosus (Foraminifera) under natural conditions

NASA Astrophysics Data System (ADS)

Kinoshita, Shunichi; Eder, Wolfgang; Wöger, Julia; Hohenegger, Johann; Briguglio, Antonino

2017-12-01

We investigated the symbiont-bearing benthic foraminifer Palaeonummulites venosus to determine the chamber building rate (CBR), test diameter increase rate (DIR), reproduction time and longevity using the `natural laboratory' approach. This is based on the decomposition of monthly obtained frequency distributions of chamber number and test diameter into normally distributed components. Test measurements were taken using MicroCT. The shift of the mean and standard deviation of component parameters during the 15-month investigation period was used to calculate Michaelis-Menten functions applied to estimate the averaged CBR and DIR under natural conditions. The individual dates of birth were estimated using the inverse averaged CBR and the inverse DIR fitted by the individual chamber number or the individual test diameter at the sampling date. Distributions of frequencies and densities (i.e., frequency divided by sediment weight) based on both CBR and DIR revealed continuous reproduction throughout the year with two peaks, a stronger one in June determined as the onset of the summer generation (generation 1) and a weaker one in November determined as the onset of the winter generation (generation 2). This reproduction scheme explains the presence of small and large specimens in the same sample. Longevity, calculated as the maximum difference in days between the individual's birth date and the sampling date, is approximately 1.5 yr, an estimation obtained by using both CBR and DIR.

The 'Natural Laboratory', a tool for deciphering growth, lifetime and population dynamics in larger benthic foraminifera

NASA Astrophysics Data System (ADS)

Hohenegger, Johann

2015-04-01

The shells of symbiont-bearing larger benthic Foraminifera (LBF) represent the response to physiological requirements in dependence of environmental conditions. All compartments of the shell such as chambers and chamberlets accommodate the growth of the cell protoplasm and are adaptations for housing photosymbiotic algae. Investigations on the biology of LBF were predominantly based on laboratory studies. The lifetime of LBF under natural conditions is still unclear. LBF, which can build >100 chambers during their lifetime, are thought to live at least one year under natural conditions. This is supported by studies on population dynamics of eulittoral foraminifera. In species characterized by a time-restricted single reproduction period the mean size of specimens increases from small to large during lifetime simultaneously reducing individual number. This becomes more complex when two or more reproduction times are present within a one-year cycle leading to a mixture of abundant small individuals with few large specimens during the year, while keeping mean size more or less constant. This mixture is typical for most sublittoral megalospheric (gamonts or schizonts) LBF. Nothing is known on the lifetime of agamonts, the diploid asexually reproducing generation. In all hyaline LBF it is thought to be significantly longer than 1 year based on the large size and considering the mean chamber building rate of the gamont/schizonts. Observations on LBF under natural conditions have not been performed yet in the deeper sublittoral. This reflects the difficulties due to intense hydrodynamics that hinder deploying technical equipment for studies in the natural environment. Therefore, studying growth, lifetime and reproduction of sublittoral LBF under natural conditions can be performed using the so-called 'natural laboratory' in comparison with laboratory investigations. The best sampling method in the upper sublittoral from 5 to 70 m depth is by SCUBA diving. Irregular sampling intervals caused by differing weather conditions may range from weeks to one month, whereby the latter represents the upper limit: larger intervals could render the data set worthless. The number of sampling points at the location must be more than 4, randomly distributed and approximately 5m apart to smooth the effects of patchy distributions, which are typical for most LBF. Only three simple measurements are necessary to determine chamber building rate and population dynamics under natural conditions. These are the number of individuals, number of chambers and the largest diameter of the individual. The determination of a standardized sample surface area, which is necessary for population dynamic investigations, depends on the sampling method. Reproduction and longevity can be estimated based on shell size using the date where the mean abundance of specimens with minimum size (expected after a one month's growth) characterizes the reproduction period. Then the difference to the date with the mean abundance of specimens characterized by large size indicating readiness for reproduction marks the life time. Calculation of the chamber-building rate based on chamber number is more complex and depends on the reproduction period and longevity. This can be fitted with theoretical growth functions (e.g. Michaelis Menten Function). According to the above mentioned methods, chamber building rates, longevity and population dynamics can be obtained for the shallow sublittoral symbiont-bearing LBF using the 'natural laboratory'.

Taxonomic Notes on the Abyssal Agglutinated Benthic Foraminifera of the HEBBLE (High Energy Benthic Boundary Layer Experiment) Area (Lower Nova Scotian Continental Rise).

DTIC Science & Technology

1983-09-01

sp. ( Protista , Rhizopoda) with comments on the taxonomy of A. ramulifonmis Jour. Mar. Biol. Assoc. U.K. 62 pp. 595-605. *! Hbglund, H., 1947...southeastern Pacific Ocean. Micropaleo. 26, (2), pp. 113- 150. Loeblich, A.R., and Tappan, H., 1964 Protista 2, Sarcodina chiefly "Thec- amoebians" and

Interpreting large-scale experiments on effects of trawling on benthic fauna: an empirical test of the potential effects of spatial confounding in experiments without replicated control and trawled areas.

PubMed

Lindegarth; Valentinsson; Hansson; Ulmestrand

2000-03-15

Disturbances due to trawling and dredging is a serious threat to assemblages of benthic marine animals. We tested hypotheses about effects of trawling on benthic assemblages in a manipulative field experiment, using gear and intensities relevant to future management of trawling in a Swedish fjord. Three trawled and three control sites were sampled at several times before and after trawling was initiated. This paper describes how conclusions about effects of trawling might differ between experiments involving replicate sites and experiments using only one trawled and one control site, as in several recent studies. Analyses of selected taxa showed that abundances of many species changed differently among control sites. Differences in temporal change between pairs of single trawled and control sites were also frequent. Neither the quantitative nor the qualitative nature of differences between treatments could, however, be coherently interpreted among the different combinations of trawled and control sites. This is consistent with results obtained from analyses using all sites, which showed no consistent effects of trawling on any of these taxa. These results provide empirical evidence that spatial confounding may cause serious problems to formal interpretation of experiments, which use only one control and one trawled area. Such potential problems can best be solved by ensuring that the study incorporates more than one control site.

New insights to ecology, ontogeny and teratology of Larger Benthic Foraminifera by biometrics based on microCT.

NASA Astrophysics Data System (ADS)

Briguglio, A.; Fabienke, W.; Wolfgring, E.; Ferrández Cañadell, C.; Hohenegger, J.

2012-04-01

The main function of tests in Larger Benthic Foraminifera (LBF) is to provide their endosymbiotic algae with enough light to obtain net photosynthetic rates and to create sufficient accommodation space. To study the relation between these two factors and to understand how the cell reacts to growth and to the environment, the newly developed technique of X-ray micro-Computer-Tomography (microCT) allows measurement of all characters of complex tests without destruction. Growth studies on 48 specimens of living and fossil species have been performed. The volumes of the lumina have been calculated as well as further 2-dimensional parameters related to volumes as chamber height, chamber width and septal distance. The volumes of chamber lumina represent cell growth in their sequence, thus demonstrating interruptions, increase/decrease or oscillations in growth rates caused by external factors affecting growth during life time (e.g. seasons). Correlations between volumes and the one-dimensional parameters have been calculated to check the form of relationship. According to our results, some parameters seem to oscillate exactly as the volume (therefore accommodating it), while others seem to oscillate constantly around a given growth function. Concerning the palaeobiology, beside the study of specimens with 'normal' growth, thus not drastically affected by external factors, some interesting morphologies have been investigated. Pluriembryonal apparati as well as secondary equatorial layers have been segmented, extracted and quantified in almost 15 specimens of Cycloclypeus carpenteri, 8 twin specimens of nummulitids tests have been also investigated to show where and how the fusion starts and volumetric quantifications of each single spiral in multispiral grown test of some large Eocene Nummulitids has also been calculated to show in which way and when (ontogenetically) a new spiral starts. The combination of all measurements allows interpretation of different biological and environmental dependencies of LBF. Varying growth rates determines environmental abiotic (e.g. seasons, instantaneous events) and biotic influence (e.g. predation), leading to life time estimation for the fossil forms by comparison with their living relatives.

Impacts of trout predation on fitness of sympatric sticklebacks and their hybrids.

PubMed Central

Vamosi, Steven M; Schluter, Dolph

2002-01-01

Predation may be a significant factor in the divergence of sympatric species although its role has been largely overlooked. This study examines the consequences of predation on the fitness of a pair of lacustrine stickleback species (Gasterosteus aculeatus complex) and their F(1) hybrids. Benthic sticklebacks are found in the littoral zone of lakes associated with vegetation and bare sediments, whereas limnetic sticklebacks spend most of their lives in the pelagic zone. The cutthroat trout (Oncorhynchus clarki) is a major predator of sticklebacks and the only other fish species native to lakes containing both benthic and limnetic species. In pond experiments we found that the addition of these predators primarily impacted the survival of limnetics. By contrast, benthic survival was unaffected by trout addition. The result was that relative survival of benthics and limnetics was reversed in the presence of trout. The presence of trout had no effect on the rank order of parent species growth rates, with benthics always growing faster than limnetics. F(1) hybrids survived poorly relative to benthics and limnetics and their growth rates were intermediate regardless of treatment. The results implicate predation by trout in the divergence of the species but not through increased vulnerability of F(1) hybrids. PMID:12028775

Seven 365-Million-Year-Old Trilobites Moulting within a Nautiloid Conch

NASA Astrophysics Data System (ADS)

Zong, Rui-Wen; Fan, Ruo-Ying; Gong, Yi-Ming

2016-10-01

A nautiloid conch containing many disarticulated exoskeletons of Omegops cornelius (Phacopidae, Trilobita) was found in the Upper Devonian Hongguleleng Formation of the northwestern margin of the Junggar Basin, NW China. The similar number of cephala, thoraces and pygidia, unbroken thoraces, explicit exuviae, and lack of other macrofossils in the conch, indicate that at least seven individual trilobites had moulted within the nautiloid living chamber, using the vacant chamber of a dead nautiloid as a communal place for ecdysis. This exuvial strategy manifests cryptic behaviour of trilobites, which may have resulted from the adaptive evolution induced by powerful predation pressure, unstable marine environments, and competition pressure of organisms occupying the same ecological niche in the Devonian period. The unusual presence of several trilobites moulting within a nautiloid conch is possibly associated with social behaviours in face of a serious crisis. New materials in this study open a window for understanding the survival strategy of marine benthic organisms, especially predator-prey interactions and the behavioural ecology of trilobites in the middle Palaeozoic.

STURM: Resuspension mesocosms with realistic bottom shear stress and water column turbulence for benthic-pelagic coupling studies: Design and Applications

NASA Astrophysics Data System (ADS)

Sanford, L. P.; Porter, E.; Porter, F. S.; Mason, R. P.

2016-02-01

Shear TUrbulence Resuspension Mesocosm (STURM) tanks, with high instantaneous bottom shear stress and realistic water column mixing in a single system, allow more realistic benthic-pelagic coupling studies that include sediment resuspension. The 1 m3 tanks can be programmed to produce tidal or episodic sediment resuspension over extended time periods (e.g. 4 weeks), over muddy sediments with or without infaunal organisms. The STURM tanks use a resuspension paddle that produces uniform bottom shear stress across the sediment surface while gently mixing a 1 m deep overlying water column. The STURM tanks can be programmed to different magnitudes, frequencies, and durations of bottom shear stress (and thus resuspension) with proportional water column turbulence levels over a wide range of mixing settings for benthic-pelagic coupling experiments. Over eight STURM calibration settings, turbulence intensity ranged from 0.55 to 4.52 cm s-1, energy dissipation rate from 0.0032 to 2.65 cm2 s-3, the average bottom shear stress from 0.0068 to 0.19 Pa, and the instantaneous bottom shear stress from 0.07 to 2.0 Pa. Mixing settings can be chosen as desired and/or varied over the experiment, based on the scientific question at hand. We have used the STURM tanks for four 4-week benthic-pelagic coupling ecosystem experiments with tidal resuspension with or without infaunal bivalves, for stepwise erosion experiments with and without infaunal bivalves, for experiments on oyster biodeposit resuspension, to mimic storms overlain on tidal resuspension, and for experiments on the effects of varying frequency and duration of resuspension on the release of sedimentary contaminants. The large size of the tanks allows water quality and particle measurements using standard oceanographic instrumentation. The realistic scale and complexity of the contained ecosystems has revealed indirect feedbacks and responses that are not observable in smaller, less complex experimental systems.

Response of marine benthic fauna to thin-layer capping with activated carbon in a large-scale field experiment in the Grenland fjords, Norway.

PubMed

Samuelsson, Göran S; Raymond, Caroline; Agrenius, Stefan; Schaanning, Morten; Cornelissen, Gerard; Gunnarsson, Jonas S

2017-06-01

A field experiment with thin-layer capping was conducted in the Grenland fjords, Norway, for remediation in situ of mercury and dioxin-contaminated sediments. Experimental fields at 30 and 95 m depth were capped with (i) powdered activated carbon (AC) mixed with clay (AC+cla`y), (ii) clay, and (iii) crushed limestone. Ecological effects on the benthic community and species-feeding guilds were studied 1 and 14 months after capping, and a total of 158 species were included in the analyses. The results show that clay and limestone had only minor effects on the benthic community, while AC+clay caused severe perturbations. AC+clay reduced the abundance, biomass, and number of species by up to 90% at both 30 and 95 m depth, and few indications of recovery were found during the period of this investigation. The negative effects of AC+clay were observed on a wide range of species with different feeding strategies, although the suspension feeding brittle star Amphiura filiformis was particularly affected. Even though activated carbon is effective in reducing sediment-to-water fluxes of dioxins and other organic pollutants, this study shows that capping with powdered AC can lead to substantial disturbances to the benthic community.

Nitrogen and phosphorus uptake rates of different species from a coral reef community after a nutrient pulse

PubMed Central

den Haan, Joost; Huisman, Jef; Brocke, Hannah J.; Goehlich, Henry; Latijnhouwers, Kelly R. W.; van Heeringen, Seth; Honcoop, Saskia A. S.; Bleyenberg, Tanja E.; Schouten, Stefan; Cerli, Chiara; Hoitinga, Leo; Vermeij, Mark J. A.; Visser, Petra M.

2016-01-01

Terrestrial runoff after heavy rainfall can increase nutrient concentrations in waters overlying coral reefs that otherwise experience low nutrient levels. Field measurements during a runoff event showed a sharp increase in nitrate (75-fold), phosphate (31-fold) and ammonium concentrations (3-fold) in waters overlying a fringing reef at the island of Curaçao (Southern Caribbean). To understand how benthic reef organisms make use of such nutrient pulses, we determined ammonium, nitrate and phosphate uptake rates for one abundant coral species, turf algae, six macroalgal and two benthic cyanobacterial species in a series of laboratory experiments. Nutrient uptake rates differed among benthic functional groups. The filamentous macroalga Cladophora spp., turf algae and the benthic cyanobacterium Lyngbya majuscula had the highest uptake rates per unit biomass, whereas the coral Madracis mirabilis had the lowest. Combining nutrient uptake rates with the standing biomass of each functional group on the reef, we estimated that the ammonium and phosphate delivered during runoff events is mostly taken up by turf algae and the two macroalgae Lobophora variegata and Dictyota pulchella. Our results support the often proposed, but rarely tested, assumption that turf algae and opportunistic macroalgae primarily benefit from episodic inputs of nutrients to coral reefs. PMID:27353576

Nitrogen and phosphorus uptake rates of different species from a coral reef community after a nutrient pulse

NASA Astrophysics Data System (ADS)

den Haan, Joost; Huisman, Jef; Brocke, Hannah J.; Goehlich, Henry; Latijnhouwers, Kelly R. W.; van Heeringen, Seth; Honcoop, Saskia A. S.; Bleyenberg, Tanja E.; Schouten, Stefan; Cerli, Chiara; Hoitinga, Leo; Vermeij, Mark J. A.; Visser, Petra M.

2016-06-01

Terrestrial runoff after heavy rainfall can increase nutrient concentrations in waters overlying coral reefs that otherwise experience low nutrient levels. Field measurements during a runoff event showed a sharp increase in nitrate (75-fold), phosphate (31-fold) and ammonium concentrations (3-fold) in waters overlying a fringing reef at the island of Curaçao (Southern Caribbean). To understand how benthic reef organisms make use of such nutrient pulses, we determined ammonium, nitrate and phosphate uptake rates for one abundant coral species, turf algae, six macroalgal and two benthic cyanobacterial species in a series of laboratory experiments. Nutrient uptake rates differed among benthic functional groups. The filamentous macroalga Cladophora spp., turf algae and the benthic cyanobacterium Lyngbya majuscula had the highest uptake rates per unit biomass, whereas the coral Madracis mirabilis had the lowest. Combining nutrient uptake rates with the standing biomass of each functional group on the reef, we estimated that the ammonium and phosphate delivered during runoff events is mostly taken up by turf algae and the two macroalgae Lobophora variegata and Dictyota pulchella. Our results support the often proposed, but rarely tested, assumption that turf algae and opportunistic macroalgae primarily benefit from episodic inputs of nutrients to coral reefs.

Nitrogen and phosphorus uptake rates of different species from a coral reef community after a nutrient pulse.

PubMed

den Haan, Joost; Huisman, Jef; Brocke, Hannah J; Goehlich, Henry; Latijnhouwers, Kelly R W; van Heeringen, Seth; Honcoop, Saskia A S; Bleyenberg, Tanja E; Schouten, Stefan; Cerli, Chiara; Hoitinga, Leo; Vermeij, Mark J A; Visser, Petra M

2016-06-29

Terrestrial runoff after heavy rainfall can increase nutrient concentrations in waters overlying coral reefs that otherwise experience low nutrient levels. Field measurements during a runoff event showed a sharp increase in nitrate (75-fold), phosphate (31-fold) and ammonium concentrations (3-fold) in waters overlying a fringing reef at the island of Curaçao (Southern Caribbean). To understand how benthic reef organisms make use of such nutrient pulses, we determined ammonium, nitrate and phosphate uptake rates for one abundant coral species, turf algae, six macroalgal and two benthic cyanobacterial species in a series of laboratory experiments. Nutrient uptake rates differed among benthic functional groups. The filamentous macroalga Cladophora spp., turf algae and the benthic cyanobacterium Lyngbya majuscula had the highest uptake rates per unit biomass, whereas the coral Madracis mirabilis had the lowest. Combining nutrient uptake rates with the standing biomass of each functional group on the reef, we estimated that the ammonium and phosphate delivered during runoff events is mostly taken up by turf algae and the two macroalgae Lobophora variegata and Dictyota pulchella. Our results support the often proposed, but rarely tested, assumption that turf algae and opportunistic macroalgae primarily benefit from episodic inputs of nutrients to coral reefs.

An In situ Study of Seasonal Dissolved Organic Carbon and Nutrient Fluxes from a Spartina alterniflora Salt Marsh in North Carolina

NASA Astrophysics Data System (ADS)

Detweiler, D. J.; Loh, A. N.

2016-02-01

Spartina alterniflora salt marshes are among the most productive and biogeochemically active ecosystems on Earth. While they have been shown to be sources of dissolved organic carbon (DOC) and nutrient export to the coastal ocean via tidal processes, it has not been well quantified experimentally. The purpose of this study was to quantify DOC and nutrient fluxes from a fringing S. alterniflora salt marsh in North Carolina. The experiment was conducted using in situ benthic microcosm chambers filled with seawater during a flooding tide; the chambers were then plugged, and samples were collected during an ebbing tide over the course of 270 minutes while simulating light and dark conditions. Water samples were filtered and analyzed for DOC and nutrient concentrations over time and used to calculate fluxes from vegetated (S. alterniflora) and non-vegetated marsh sediments. Preliminary daily flux calculations show that fluxes from vegetated sediments have a higher magnitude when compared to fluxes from non-vegetated sediments. Daily flux calculations also suggest that vegetated sediments act as a DOC source while non-vegetated sediments act as a DOC sink. Additional flux data for dissolved inorganic and organic nitrogen (DIN, DON) and dissolved inorganic and organic phosphorus (DIP, DOP) as well as marsh sediment characterization will also be presented. Ultimately, these data will provide seasonal daily flux calculations for S. alterniflora salt marshes and insight as to how changing environmental conditions such as wetland modification, wetland destruction, nutrient input, and climate change are affecting coastal biogeochemical cycles.

Benthic boundary layer processes in the Lower Florida Keys

USGS Publications Warehouse

Lavoie, D.L.; Richardson, M.D.; Holmes, C.

1997-01-01

This special issue of Geo-Marine Letters, "Benthic Boundary Layer Processes in the Lower Florida Keys," includes 12 papers that present preliminary results from the Key West Campaign. The Dry Tortugas and Marquesas Keys test sites were selected by a group of 115 scientists and technicians to study benthic boundary layer processes in a carbonate environment controlled by bioturbation and biogeochemical processes. Major activities included remote sediment classification; high-frequency acoustic scattering experiments; sediment sampling for radiological, geotechnical, biological, biogeochemical, physical, and geoacoustic studies; and hydrodynamic studies using an instrumented tetrapod. All these data are being used to improve our understanding of the effects of environmental processes on sediment structure and behavior.

Food web flows through a sub-arctic deep-sea benthic community

NASA Astrophysics Data System (ADS)

Gontikaki, E.; van Oevelen, D.; Soetaert, K.; Witte, U.

2011-11-01

The benthic food web of the deep Faroe-Shetland Channel (FSC) was modelled by using the linear inverse modelling methodology. The reconstruction of carbon pathways by inverse analysis was based on benthic oxygen uptake rates, biomass data and transfer of labile carbon through the food web as revealed by a pulse-chase experiment. Carbon deposition was estimated at 2.2 mmol C m -2 d -1. Approximately 69% of the deposited carbon was respired by the benthic community with bacteria being responsible for 70% of the total respiration. The major fraction of the labile detritus flux was recycled within the microbial loop leaving merely 2% of the deposited labile phytodetritus available for metazoan consumption. Bacteria assimilated carbon at high efficiency (0.55) but only 24% of bacterial production was grazed by metazoans; the remaining returned to the dissolved organic matter pool due to viral lysis. Refractory detritus was the basal food resource for nematodes covering ∼99% of their carbon requirements. On the contrary, macrofauna seemed to obtain the major part of their metabolic needs from bacteria (49% of macrofaunal consumption). Labile detritus transfer was well-constrained, based on the data from the pulse-chase experiment, but appeared to be of limited importance to the diet of the examined benthic organisms (<1% and 5% of carbon requirements of nematodes and macrofauna respectively). Predation on nematodes was generally low with the exception of sub-surface deposit-feeding polychaetes that obtained 35% of their energy requirements from nematode ingestion. Carnivorous polychaetes also covered 35% of their carbon demand through predation although the preferred prey, in this case, was other macrofaunal animals rather than nematodes. Bacteria and detritus contributed 53% and 12% to the total carbon ingestion of carnivorous polychaetes suggesting a high degree of omnivory among higher consumers in the FSC benthic food web. Overall, this study provided a unique insight into the functioning of a deep-sea benthic community and demonstrated how conventional data can be exploited further when combined with state-of-the-art modelling approaches.

Oxygen, carbon, and nutrient exchanges at the sediment-water interface in the Mar Piccolo of Taranto (Ionian Sea, southern Italy).

PubMed

De Vittor, Cinzia; Relitti, Federica; Kralj, Martina; Covelli, Stefano; Emili, Andrea

2016-07-01

In the shallow environment, the nutrient and carbon exchanges at the sediment-water interface contribute significantly to determine the trophic status of the whole water column. The intensity of the allochthonous input in a coastal environment subjected to strong anthropogenic pressures determines an increase in the benthic oxygen demand leading to depressed oxygen levels in the bottom waters. Anoxic conditions resulting from organic enrichment can enhance the exchange of nutrients between sediments and the overlying water. In the present study, carbon and nutrient fluxes at the sediment-water interface were measured at two experimental sites, one highly and one moderately contaminated, as reference point. In situ benthic flux measurements of dissolved species (O2, DIC, DOC, N-NO3 (-), N-NO2 (-), N-NH4 (+), P-PO4 (3-), Si-Si(OH)4, H2S) were conducted using benthic chambers. Furthermore, undisturbed sediment cores were collected for analyses of total and organic C, total N, and biopolymeric carbon (carbohydrates, proteins, and lipids) as well as of dissolved species in porewaters and supernatant in order to calculate the diffusive fluxes. The sediments were characterized by suboxic to anoxic conditions with redox values more negative in the highly contaminated site, which was also characterized by higher biopolymeric carbon content (most of all lipids), lower C/N ratios and generally higher diffusive fluxes, which could result in a higher release of contaminants. A great difference was observed between diffusive and in situ benthic fluxes suggesting the enhancing of fluxes by bioturbation and the occurrence of biogeochemically important processes at the sediment-water interface. The multi-contamination of both inorganic and organic pollutants, in the sediments of the Mar Piccolo of Taranto (declared SIN in 1998), potentially transferable to the water column and to the aquatic trophic chain, is of serious concern for its ecological relevance, also considering the widespread fishing and mussel farming activities in the area.

Bioturbation transports secondary microplastics to deeper layers in soft marine sediments of the northern Baltic Sea.

PubMed

Näkki, Pinja; Setälä, Outi; Lehtiniemi, Maiju

2017-06-15

Microplastics (MPs) are observed to be present on the seafloor ranging from coastal areas to deep seas. Because bioturbation alters the distribution of natural particles on inhabited soft bottoms, a mesocosm experiment with common benthic invertebrates was conducted to study their effect on the distribution of secondary MPs (different-sized pieces of fishing line<1mm). During the study period of three weeks, the benthic community increased MP concentration in the depth of 1.7-5.1cm in the sediment. The experiment revealed a clear vertical gradient in MP distribution with their abundance being highest in the uppermost parts of the sediment and decreasing with depth. The Baltic clam Macoma balthica was the only study animal that ingested MPs. This study highlights the need to further examine the vertical distribution of MPs in natural sediments to reliably assess their abundance on the seafloor as well as their potential impacts on benthic communities. Copyright © 2017 Elsevier Ltd. All rights reserved.

`Live' benthic foraminifera at an abyssal site in the equatorial Pacific nodule province: Abundance, diversity and taxonomic composition

NASA Astrophysics Data System (ADS)

Nozawa, Fusae; Kitazato, Hiroshi; Tsuchiya, Masashi; Gooday, Andrew J.

2006-08-01

Replicate sediment samples were obtained from 3 closely spaced stations in the Kaplan East (KE) area of the abyssal eastern Equatorial Pacific (˜15°N, 119°W; ˜4100 m water depth), just below the carbonate compensation depth. At each site, 2 (Stns 827, 838) or 3 (Stn 824) complete cores (57 mm i.d.) were subsampled using 2-3 cut-off syringes of 6.6 cm 3 cross-sectional area. The 0-1 cm sediment layers (>32 μm fraction) of these 20 subsamples together yielded 12,513 small, rose-Bengal stained benthic foraminifera dominated by agglutinated taxa, most of them morphologically simple monothalamous types or komokiaceans. Almost two-thirds (65%) of specimens were either obvious fragments, mainly of komokiaceans and tubular foraminifera, or single chambers or small groups of chambers believed to be fragments of very fragile komokiaceans. The remaining 4438 specimens (35%) were considered to be complete individuals. Most (78%) of these complete tests were indeterminate agglutinated spheres (termed 'psammosphaerids') that constituted 27.6% of all specimens (complete plus fragments). Complete individuals that could be assigned to either described or undescribed species accounted for 983 specimens (22% of complete tests=7.6% of all specimens); only 26 specimens (0.59% of complete individuals) were calcareous and these had invariably lost their tests through dissolution. Some groups exhibited considerable spatial heterogeneity. For example, 45% of the 3455 indeterminate psammosphaerids and 45% of the 3087 Komokiacean-like chambers occurred in single subcores. A total of 252 morphospecies was recognised; 168 were represented by complete individuals and 84 by fragments. There are clear differences between these Pacific assemblages and those from other oceans; in particular, psammosphaerids and isolated komokiacean chambers appear to be much more prevalent in the Pacific compared to the Atlantic Ocean. Some morphospecies present in Kaplan samples are known from the Atlantic but many are not. Such species may either (1) be ubiquitous but undersampled because they are rare or (2) have geographically patterned distributions. Without further sampling, there is no way to distinguish between these 2 possibilities. Fossilisable tests represent a very small component of the KE assemblage. Many of the delicate, monothalamous species that have little fossilisation potential, including the komokiaceans, accumulate stercomata (waste pellets) and may consume organic material and bacteria associated with sediment. Because of their enormous abundance at abyssal depths, these poorly known taxa probably play a substantial role in carbon cycling over vast areas of the Pacific seafloor.

Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity

PubMed Central

Haas, Andreas F.; Nelson, Craig E.; Wegley Kelly, Linda; Carlson, Craig A.; Rohwer, Forest; Leichter, James J.; Wyatt, Alex; Smith, Jennifer E.

2011-01-01

Benthic primary producers in marine ecosystems may significantly alter biogeochemical cycling and microbial processes in their surrounding environment. To examine these interactions, we studied dissolved organic matter release by dominant benthic taxa and subsequent microbial remineralization in the lagoonal reefs of Moorea, French Polynesia. Rates of photosynthesis, respiration, and dissolved organic carbon (DOC) release were assessed for several common benthic reef organisms from the backreef habitat. We assessed microbial community response to dissolved exudates of each benthic producer by measuring bacterioplankton growth, respiration, and DOC drawdown in two-day dark dilution culture incubations. Experiments were conducted for six benthic producers: three species of macroalgae (each representing a different algal phylum: Turbinaria ornata – Ochrophyta; Amansia rhodantha – Rhodophyta; Halimeda opuntia – Chlorophyta), a mixed assemblage of turf algae, a species of crustose coralline algae (Hydrolithon reinboldii) and a dominant hermatypic coral (Porites lobata). Our results show that all five types of algae, but not the coral, exuded significant amounts of labile DOC into their surrounding environment. In general, primary producers with the highest rates of photosynthesis released the most DOC and yielded the greatest bacterioplankton growth; turf algae produced nearly twice as much DOC per unit surface area than the other benthic producers (14.0±2.8 µmol h−1 dm−2), stimulating rapid bacterioplankton growth (0.044±0.002 log10 cells h−1) and concomitant oxygen drawdown (0.16±0.05 µmol L−1 h−1 dm−2). Our results demonstrate that benthic reef algae can release a significant fraction of their photosynthetically-fixed carbon as DOC, these release rates vary by species, and this DOC is available to and consumed by reef associated microbes. These data provide compelling evidence that benthic primary producers differentially influence reef microbial dynamics and biogeochemical parameters (i.e., DOC and oxygen availability, bacterial abundance and metabolism) in coral reef communities. PMID:22125645

Uptake of algal carbon and the synthesis of an "essential" fatty acid by Uvigerina ex. gr. semiornata (Foraminifera) within the Pakistan margin oxygen minimum zone: evidence from fatty acid biomarker and 13C tracer experiments

NASA Astrophysics Data System (ADS)

Larkin, K. E.; Gooday, A. J.; Woulds, C.; Jeffreys, R.; Schwartz, M.; Cowie, G.; Whitcraft, C.; Levin, L.; Dick, J. R.; Pond, D. W.

2014-01-01

Foraminifera are an important component of benthic communities in oxygen depleted settings, where they potentially play a~significant role in the processing of organic matter. We tracked the uptake of a 13C-labeled algal food source into individual fatty acids in the benthic foraminiferal species, Uvigerina ex. gr. semiornata, from the Arabian Sea oxygen minimum zone (OMZ). The tracer experiments were conducted on the Pakistan Margin during the late/post monsoon period (August-October 2003). A monoculture of the diatom Thalassiosira weisflogii was 13C-labeled and used to simulate a pulse of phytoplankton in two complementary experiments. A lander system was used for in situ incubations at 140 m and for 2.5 days duration, whilst a laboratory incubation used an oxystat system to maintain ambient dissolved oxygen concentrations. These shipboard experiments were terminated after 5 days. Uptake of diatoms was rapid, with high incorporation of diatom fatty acids into foraminifera after ~2 days in both experiments. Ingestion of the diatom food source was indicated by the increase over time in the quantity of diatom biomarker fatty acids in the foraminifera and by the high percentage of 13C in many of the fatty acids present at the endpoint of both in~situ and laboratory-based experiments. These results indicate that U. ex. gr. semiornata rapidly ingested the diatom food source and that this foraminifera will play an important role in the short-term cycling of organic matter within this OMZ environment. The experiments also suggested that U. ex. gr. semiornata consumed non-labeled bacterial food items, particularly bacteria, and synthesised the polyunsaturated fatty acid 20:4(n-6) de novo. 20:4(n-6) is often abundant in benthic fauna yet its origins and function have remained unclear. This study demonstrates that U. ex. gr. semiornata is capable of de novo synthesis of this "essential fatty acid" and is potentially a major source of this dietary nutrient in benthic food webs.

Benthic marine calcifiers coexist with CaCO3-undersaturated seawater worldwide

NASA Astrophysics Data System (ADS)

Lebrato, M.; Andersson, A. J.; Ries, J. B.; Aronson, R. B.; Lamare, M. D.; Koeve, W.; Oschlies, A.; Iglesias-Rodriguez, M. D.; Thatje, S.; Amsler, M.; Vos, S. C.; Jones, D. O. B.; Ruhl, H. A.; Gates, A. R.; McClintock, J. B.

2016-07-01

Ocean acidification and decreasing seawater saturation state with respect to calcium carbonate (CaCO3) minerals have raised concerns about the consequences to marine organisms that build CaCO3 structures. A large proportion of benthic marine calcifiers incorporate Mg2+ into their skeletons (Mg-calcite), which, in general, reduces mineral stability. The relative vulnerability of some marine calcifiers to ocean acidification appears linked to the relative solubility of their shell or skeletal mineralogy, although some organisms have sophisticated mechanisms for constructing and maintaining their CaCO3 structures causing deviation from this dependence. Nevertheless, few studies consider seawater saturation state with respect to the actual Mg-calcite mineralogy (ΩMg-x) of a species when evaluating the effect of ocean acidification on that species. Here, a global dataset of skeletal mole % MgCO3 of benthic calcifiers and in situ environmental conditions spanning a depth range of 0 m (subtidal/neritic) to 5600 m (abyssal) was assembled to calculate in situ ΩMg-x. This analysis shows that 24% of the studied benthic calcifiers currently experience seawater mineral undersaturation (ΩMg-x < 1). As a result of ongoing anthropogenic ocean acidification over the next 200 to 3000 years, the predicted decrease in seawater mineral saturation will expose approximately 57% of all studied benthic calcifying species to seawater undersaturation. These observations reveal a surprisingly high proportion of benthic marine calcifiers exposed to seawater that is undersaturated with respect to their skeletal mineralogy, underscoring the importance of using species-specific seawater mineral saturation states when investigating the impact of CO2-induced ocean acidification on benthic marine calcification.

Long-term impact of bottom trawling on pelagic-benthic coupling in the southern North Sea (German Bight)

NASA Astrophysics Data System (ADS)

Friedrich, Jana; van Beusekom, Justus E. E.; Neumann, Andreas; Naderipour, Celine; Janssen, Felix; Ahmerkamp, Soeren; Holtappels, Moritz; Schueckel, Ulrike

2016-04-01

The southern North Sea, and the German Bight, has been systematically bottom-trawled at least since the late 19th century (Christiansen, 2009; Reiss et al., 2009; Kröncke 2011; Emeis et al., 2015, Neumann et al., 2016). As a result, benthic habitats and benthic biogenic structures created by bivalves, polychaetes and hydroids where destroyed or reduced. The parallel removal of hard substrate (gravel and boulders) avoids the resettlement of hard-substrate depended species. For example, the Oyster ground, a huge oyster bank a hundred years ago (Olsen, 1883), turned into a muddy depression today. In addition, shallow depth of max 40 m, strong tidal currents and frequent storms result in a high-energy environment with low sedimentation rates and recurrent sediment resuspension. The decrease in benthic filtering capacity by disturbance in epifauna and bottom roughness (Callaway et al., 2007) apparently influence pelagic-benthic coupling of biogeochemical fluxes. Heip et al. (1995) indicate that benthic respiration at depths prevailing in the German Bight accounts for 10-40% of total respiration, whereas pelagic respiration accounts for 60-90%. Previous estimates are in the middle of this range (Heip et al., 1995). To test these hypotheses and to assess the partitioning of benthic and pelagic processes, and the factors influencing organic matter mineralization, we measured pelagic production and respiration based on Winkler titration, in-situ benthic fluxes using chamber landers, we did ex-situ incubations of intact sediment cores and analysed still images from a towed benthic video sled. In addition, O2 fluxes in permeable sediments were estimated by integrating the volumetric rate measurements of the upper sediment layer over in-situ microsensor-measured O2 penetration depth. Our current results show significant seasonality in benthic respiration, with highest rates in summer and lowest rates in winter. No significant differences in total benthic respiration rates were measured on sandy (permeable) and silty (diffusive) sediments, whereas significant differences of microbial O2 uptake were observed indeed between permeable and diffusive sediments. Nevertheless, when considering the multitude of different methods, we found that benthic respiration over the season seemed to be governed mainly by settling of fresh organic matter during calm periods and its rapid turnover in a region where strong tidal and wind-forced currents distribute suspended particles over large areas. Summer pelagic respiration rates were an order of magnitude higher then benthic rates, and account for 88-93% of total respiration, which represents 79-98% of pelagic primary production. Our measurements of benthic respiration account for 7-12% of the total in the German Bight, which is lower compared to earlier studies. Strong tidal and wind-forced currents along with the lack of complex three-dimensional biogenic structures seem to prevent settling of suspended matter and foster resuspension, thereby supporting pelagic turnover processes. Hence, we assume that benthic turnover might have been higher before systematic bottom trawling destroyed the bottom hydrobiological regime. Today, due to the strong current regime in the German Bight, the pelagic system appears to be a largely closed system of production and respiration, with comparably little for export to the benthic system due to absence of biogenic structures. References Callaway R, Engelhard GH, Dann J, Cotter J, Rumohr H (2007) One century of North Sea epibenthos and fishing: comparison between 1902-1912, 1982-1985 and 2000. Marine Ecology Progress Series 346, 27-43. Christiansen S (2009) Towards good environmental status - A network of marine protected areas for the North Sea. In: Lutter S (ed) WWF Germany, Fankfurt/Main Emeis K-C, van Beusekom J, Callies U, Ebinghaus R, Kannen A, Kraus G, Kröncke I, Lenhart H, Lorkowski I, Matthias V, Möllmann C, Pätsch J, Scharfe M, Thomas H, Weisse R, Zorita E (2015) The North Sea -A shelf sea in the Anthropocene. Journal of Marine Systems 141:18-33 Heip CHR, Goosen NK, Herman PMJ, Kromkamp J, Middelburg JJ, Soetaerd K (1995) Production and consumption of biological particles in temperate tidal estuaries. Oceanography and Marine Biology: an Annual Review 33:1-149 Kröncke I (2011) Changes in Dogger Bank macrofauna communities in the 20th century caused by fishing and climate. Estuarine, Coastal and Shelf Sciences 94 (3): 234-245. Neumann H, Diekmann R, Kröncke I (2016) The influence of habitat characteristics and fishing effort on functional composition of epifauna in the south-eastern North Sea. Estuarine, Coastal and Shelf Sciences 169: 182-194. Olsen OT (1883) The Piscatorial Atlas of the North Sea, English and St. George's Channels. Taylor and Francis, London Reiss H, Greenstreet S, Sieben K, Ehrich S, Piet G, Quirijns F, Robinson F, Wolff W, Kröncke I (2009) Effects of fishing disturbance on benthic communities and secondary production within an intensively fished area. Marine Ecology Progress Series 394:201-213

The argonaut shell: gas-mediated buoyancy control in a pelagic octopus.

PubMed

Finn, Julian K; Norman, Mark D

2010-10-07

Argonauts (Cephalopoda: Argonautidae) are a group of rarely encountered open-ocean pelagic octopuses with benthic ancestry. Female argonauts inhabit a brittle 'paper nautilus' shell, the role of which has puzzled naturalists for millennia. The primary role attributed to the shell has been as a receptacle for egg deposition and brooding. Our observations of wild argonauts have revealed that the thin calcareous shell also functions as a hydrostatic structure, employed by the female argonaut to precisely control buoyancy at varying depths. Female argonauts use the shell to 'gulp' a measured volume of air at the sea surface, seal off the captured gas using flanged arms and forcefully dive to a depth where the compressed gas buoyancy counteracts body weight. This process allows the female argonaut to attain neutral buoyancy at depth and potentially adjust buoyancy to counter the increased (and significant) weight of eggs during reproductive periods. Evolution of this air-capture strategy enables this negatively buoyant octopus to survive free of the sea floor. This major shift in life mode from benthic to pelagic shows strong evolutionary parallels with the origins of all cephalopods, which attained gas-mediated buoyancy via the closed-chambered shells of the true nautiluses and their relatives.

Bacterial production in the water column of small streams highly depends on terrestrial dissolved organic carbon

NASA Astrophysics Data System (ADS)

Graeber, Daniel; Poulsen, Jane R.; Rasmussen, Jes J.; Kronvang, Brian; Zak, Dominik; Kamjunke, Norbert

2016-04-01

In the recent years it has become clear that the largest part of the terrestrial dissolved organic carbon (DOC) pool is removed on the way from the land to the ocean. Yet it is still unclear, where in the freshwater systems terrestrial DOC is actually taken up, and for streams DOC uptake was assumed to happen mostly at the stream bottom (benthic zone). However, a recent monitoring study implies that water column but not benthic bacteria are strongly affected by the amount and composition of DOM entering streams from the terrestrial zone. We conducted an experiment to compare the reaction of the bacterial production and heterotrophic uptake in the water column and the benthic zone to a standardized source of terrestrial DOC (leaf leachate from Beech litter). In detail, we sampled gravel and water from eight streams with a gradient in stream size and land use. For each stream four different treatments were incubated at 16°C for three days and each stream: filtered stream water with gravel stones (representing benthic zone bacteria) or unfiltered stream water (representing water column bacteria), both either with (n = 5) or, without (n = 3) leaf leachate. We found that the bacterial uptake of leaf litter DOC was higher for the benthic zone likely due to the higher bacterial production compared to the water column. In contrast, the bacterial production per amount of leaf leachate DOC taken up was significantly higher for the bacteria in the water column than for those in the benthic zone. This clearly indicates a higher growth efficiency with the leaf leachate DOC for the bacteria in the water column than in the benthic zone. We found a high variability for the growth efficiency in the water column, which was best explained by a negative correlation of the DOC demand with stream width (R² = 0.86, linear correlation of log-transformed data). This was not the case for the benthic zone bacteria (R² = 0.02). This implies that water column bacteria in very small streams are more dependent on terrestrial DOC sources for their growth than those in larger streams. Based on this experiment and literature data we hypothesize that: I) The response of the bacterial production to terrestrial DOC in the water column is stronger than for the benthic zone and is decreasing with increasing stream size, likely due to the increase of autochthonous DOC production within the stream. II) Independent of stream size there is only a small reaction to terrestrial DOC for the bacterial production in the benthic zone, either due to internal DOC production or a stronger dependency on particulate organic carbon. We propose that this terrestrial DOC dependency concept is generally applicable, however, its potential underlying mechanisms and concept predictions need to be tested further for other stream and river ecosystems.

The relation between invertebrate drift and two primary controls, discharge and benthic densities, in a large regulated river

USGS Publications Warehouse

Kennedy, Theodore A.; Yackulic, Charles B.; Cross, Wyatt F.; Grams, Paul E.; Yard, Michael D.; Copp, Adam J.

2014-01-01

1. Invertebrate drift is a fundamental process in streams and rivers. Studies from laboratory experiments and small streams have identified numerous extrinsic (e.g. discharge, light intensity, water quality) and intrinsic factors (invertebrate life stage, benthic density, behaviour) that govern invertebrate drift concentrations (# m−3), but the factors that govern invertebrate drift in larger rivers remain poorly understood. For example, while large increases or decreases in discharge can lead to large increases in invertebrate drift, the role of smaller, incremental changes in discharge is poorly described. In addition, while we might expect invertebrate drift concentrations to be proportional to benthic densities (# m−2), the benthic–drift relation has not been rigorously evaluated. 2. Here, we develop a framework for modelling invertebrate drift that is derived from sediment transport studies. We use this framework to guide the analysis of high-resolution data sets of benthic density and drift concentration for four important invertebrate taxa from the Colorado River downstream of Glen Canyon Dam (mean daily discharge 325 m3 s−1) that were collected over 18 months and include multiple observations within days. Ramping of regulated flows on this river segment provides an experimental treatment that is repeated daily and allowed us to describe the functional relations between invertebrate drift and two primary controls, discharge and benthic densities. 3. Twofold daily variation in discharge resulted in a >10-fold increase in drift concentrations of benthic invertebrates associated with pools and detritus (i.e. Gammarus lacustris and Potamopyrgus antipodarum). In contrast, drift concentrations of sessile blackfly larvae (Simuliium arcticum), which are associated with high-velocity cobble microhabitats, decreased by over 80% as discharge doubled. Drift concentrations of Chironomidae increased proportional to discharge. 4. Drift of all four taxa was positively related to benthic density. Drift concentrations of Gammarus, Potamopyrgus and Chironomidae were proportional to benthic density. Drift concentrations of Simulium were positively related to benthic density, but the benthic–drift relation was less than proportional (i.e. a doubling of benthic density only led to a 40% increase in drift concentrations). 5. Our study demonstrates that invertebrate drift concentrations in the Colorado River are jointly controlled by discharge and benthic densities, but these controls operate at different timescales. Twofold daily variation in discharge associated with hydropeaking was the primary control on within-day variation in invertebrate drift concentrations. In contrast, benthic density, which varied 10- to 1000-fold among sampling dates, depending on the taxa, was the primary control on invertebrate drift concentrations over longer timescales (weeks to months).

Benthic fluxes of oxygen and inorganic nutrients in the archipelago of Gulf of Finland, Baltic Sea - Effects of sediment resuspension measured in situ

NASA Astrophysics Data System (ADS)

Niemistö, Juha; Kononets, Mikhail; Ekeroth, Nils; Tallberg, Petra; Tengberg, Anders; Hall, Per O. J.

2018-05-01

Benthic fluxes of oxygen and dissolved inorganic nutrients; phosphate (DIP), ammonium (NH4), nitrate + nitrite (NOx), and silicate (DSi); and the effects of resuspension on these were studied in situ with the Göteborg benthic landers in the Gulf of Finland archipelago, Baltic Sea. The benthic fluxes were examined at two shallow stations at depths of 7 m and 20 m in May and August 2014. Resuspension altered benthic fluxes of oxygen and nutrients in most of the experiments in August, but not in May, which was mainly due to weaker resuspension treatments in spring. Additionally, the benthic nutrient regeneration rates were higher and redox conditions lower in August when the water was warmer. In August, resuspension increased the benthic oxygen uptake by 33-35%, which was, in addition to stronger resuspension treatment, attributed to higher amounts of dissolved reduced substances in the sediment pore water in comparison to conditions in May. Adsorption onto newly formed iron oxyhydroxides could explain the uptake of DIP by the sediment at the 20 m station and the lowering of the DSi efflux by 31% at the 7 m station during resuspension in August. In addition, resuspension promoted nitrification, as indicated by increased NOx fluxes at both stations (by 30% and 27% at the 7 m and 20 m station, respectively) and a lowered NH4 flux (by 48%) at the 7 m station. Predicted increases in the magnitude and frequency of resuspension will thus markedly affect the transport of phosphorus and silicon and the cycling of nitrogen in the shallow areas of the Gulf of Finland.

Effect of settled diatom‐aggregates on benthic nitrogen cycling

PubMed Central

Thamdrup, Bo; Stief, Peter; Glud, Ronnie N.

2017-01-01

Abstract The marine sediment hosts a mosaic of microhabitats. Recently it has been demonstrated that the settlement of phycodetrital aggregates can induce local changes in the benthic O2 distribution due to confined enrichment of organic material and alteration of the diffusional transport. Here, we show how this microscale O2 shift substantially affects benthic nitrogen cycling. In sediment incubations, the settlement of diatom‐aggregates markedly enhanced benthic O2 and NO3− consumption and stimulated NO2− and NH4+ production. Oxygen microprofiles revealed the rapid development of anoxic niches within and underneath the aggregates. During 120 h following the settling of the aggregates, denitrification of NO3− from the overlying water increased from 13.5 μmol m−2 h−1 to 24.3 μmol m−2 h−1, as quantified by 15N enrichment experiment. Simultaneously, N2 production from coupled nitrification‐denitrification decreased from 33.4 μmol m−2 h−1 to 25.9 μmol m−2 h−1, probably due to temporary inhibition of the benthic nitrifying community. The two effects were of similar magnitude and left the total N2 production almost unaltered. At the aggregate surface, nitrification was, conversely, very efficient in oxidizing NH4+ liberated by mineralization of the aggregates. The produced NO3− was preferentially released into the overlying water and only a minor fraction contributed to denitrification activity. Overall, our data indicate that the abrupt change in O2 microdistribution caused by aggregates stimulates denitrification of NO3− from the overlying water, and loosens the coupling between benthic nitrification and denitrification both in time and space. The study contributes to expanding the conceptual and quantitative understanding of how nitrogen cycling is regulated in dynamic benthic environments. PMID:29456269

Growth, physiochemical and antioxidant responses of overwintering benthic cyanobacteria to hydrogen peroxide.

PubMed

Chen, Chao; Yang, Zhen; Kong, Fanxiang; Zhang, Min; Yu, Yang; Shi, Xiaoli

2016-12-01

The recruitment of overwintering benthic cyanobacteria from the sediment surface is important for the development of cyanobacterial blooms during warm spring seasons. Thus, controlling the growth of cyanobacteria at the benthic stage to inhibit their recruitment is vital to control or delay the formation of summer blooms. In this study, overwintering benthic cyanobacteria were exposed to ascending hydrogen peroxide (H 2 O 2 ) concentrations (0, 1, 5, and 20 mg/L) in a simulated overwintering environment. Photosynthetic pigments, physiochemical features, and antioxidant responses were evaluated to determine the inhibitory effects of H 2 O 2 on the growth of benthic cyanobacteria and to identify the potential mechanisms thereof. These H 2 O 2 -treated cyanobacteria were then collected through filtration and transferred to an optimum environment to evaluate their recovery capacity. The results showed that chlorophyll a and phycocyanin contents, photosynthetic yield, and esterase activity decreased significantly in H 2 O 2 treated groups compared to the control. The activities of superoxide dismutase (SOD) and catalase (CAT) in benthic cyanobacteria were inhibited after 72 h exposure to H 2 O 2 , while the malondialdehyde (MDA) contents were stimulated at the same time. These results indicate that H 2 O 2 can inhibit the growth of benthic cyanobacteria, and H 2 O 2 -induced oxidative damage might be one of the mechanisms involved. The recovery experiment showed that the impairment of benthic cyanobacteria was temporary at a low dose of 1 mg/L H 2 O 2 , but permanent damage was induced when H 2 O 2 concentrations were increased to 5 and 20 mg/L. Overall, our results highlight that H 2 O 2 is a potential cyanobacteria inhibitor and can be used to decreasing the biomass of overwintering cyanobacteria, and could further control the intensity of cyanobacteria during the growth seasons. Copyright © 2016. Published by Elsevier Ltd.

C-13 dynamics in benthic algae: Effects of light, phosphorus, and biomass development

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hill, Walter; Fanta, S.E.; Roberts, Brian J

2008-07-01

We performed three experiments in indoor streams and one experiment in a natural stream to investigate the effects of growth factors on {delta}{sup 13}C levels in benthic microalgae. In the indoor streams, algae grown under conditions of high light and high phosphorus had {delta}{sup 13}C values that were 16% higher than those in algae grown under conditions of low light and low phosphorus. Light effects were much stronger than phosphorus effects. The effects of both factors increased in strength as algal biomass accrued, and by the end of the experiments, algal {delta}{sup 13}C and biomass were highly correlated. In themore » natural stream, algae exposed to direct sunlight were enriched 15% over shaded algae, corroborating the strong effect of light in the indoor streams. Growth factors such as light and nutrients probably reduce discrimination against {delta}{sup 13}C (raising {delta}{sup 13}C values) in benthic microalgae by causing CO{sub 2} depletion both within individual cells and within the assemblage matrix. However, because the most marked fractionation occurred in older and thicker assemblages, CO{sub 2} depletion within the assemblage matrix appeared to be more important than depletion within individual cells. In the absence of carbon-concentrating mechanisms, elevated {delta}{sup 13}C suggests that inorganic carbon may limit the growth of benthic algae. The extensive range of d13C values (-14{per_thousand} to -36{per_thousand}) created by light and nutrient manipulations in this study easily encompassed the mean {delta}{sup 13}C values of both C{sub 3} and C{sub 4} terrestrial plants, indicating the challenge aquatic ecologists face in identifying carbon sources for higher trophic levels when light and nutrient conditions vary.« less

Nematomorph parasites indirectly alter the food web and ecosystem function of streams through behavioural manipulation of their cricket hosts.

PubMed

Sato, Takuya; Egusa, Tomohiro; Fukushima, Keitaro; Oda, Tomoki; Ohte, Nobuhito; Tokuchi, Naoko; Watanabe, Katsutoshi; Kanaiwa, Minoru; Murakami, Isaya; Lafferty, Kevin D

2012-08-01

Nematomorph parasites manipulate crickets to enter streams where the parasites reproduce. These manipulated crickets become a substantial food subsidy for stream fishes. We used a field experiment to investigate how this subsidy affects the stream community and ecosystem function. When crickets were available, predatory fish ate fewer benthic invertebrates. The resulting release of the benthic invertebrate community from fish predation indirectly decreased the biomass of benthic algae and slightly increased leaf break-down rate. This is the first experimental demonstration that host manipulation by a parasite can reorganise a community and alter ecosystem function. Nematomorphs are common, and many other parasites have dramatic effects on host phenotypes, suggesting that similar effects of parasites on ecosystems might be widespread. © 2012 Blackwell Publishing Ltd/CNRS.

Nematomorph parasites indirectly alter the food web and ecosystem function of streams through behavioural manipulation of their cricket hosts.

USGS Publications Warehouse

Sato, T.; Egusa, T.; Fukushima, K.; Oda, T.; Ohte, N.; Tokuchi, Naoko; Watanabe, Katsutoshi; Kanaiwa, Minoru; Murakami, Isaya; Lafferty, Kevin D.

2012-01-01

Nematomorph parasites manipulate crickets to enter streams where the parasites reproduce. These manipulated crickets become a substantial food subsidy for stream fishes. We used a field experiment to investigate how this subsidy affects the stream community and ecosystem function. When crickets were available, predatory fish ate fewer benthic invertebrates. The resulting release of the benthic invertebrate community from fish predation indirectly decreased the biomass of benthic algae and slightly increased leaf break-down rate. This is the first experimental demonstration that host manipulation by a parasite can reorganise a community and alter ecosystem function. Nematomorphs are common, and many other parasites have dramatic effects on host phenotypes, suggesting that similar effects of parasites on ecosystems might be widespread.

Benthic macroinvertebrates in lake ecological assessment: A review of methods, intercalibration and practical recommendations.

PubMed

Poikane, Sandra; Johnson, Richard K; Sandin, Leonard; Schartau, Ann Kristin; Solimini, Angelo G; Urbanič, Gorazd; Arbačiauskas, Kęstutis; Aroviita, Jukka; Gabriels, Wim; Miler, Oliver; Pusch, Martin T; Timm, Henn; Böhmer, Jürgen

2016-02-01

Legislation in Europe has been adopted to determine and improve the ecological integrity of inland and coastal waters. Assessment is based on four biotic groups, including benthic macroinvertebrate communities. For lakes, benthic invertebrates have been recognized as one of the most difficult organism groups to use in ecological assessment, and hitherto their use in ecological assessment has been limited. In this study, we review and intercalibrate 13 benthic invertebrate-based tools across Europe. These assessment tools address different human impacts: acidification (3 methods), eutrophication (3 methods), morphological alterations (2 methods), and a combination of the last two (5 methods). For intercalibration, the methods were grouped into four intercalibration groups, according to the habitat sampled and putative pressure. Boundaries of the 'good ecological status' were compared and harmonized using direct or indirect comparison approaches. To enable indirect comparison of the methods, three common pressure indices and two common biological multimetric indices were developed for larger geographical areas. Additionally, we identified the best-performing methods based on their responsiveness to different human impacts. Based on these experiences, we provide practical recommendations for the development and harmonization of benthic invertebrate assessment methods in lakes and similar habitats. Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

The cloud chamber as a field diagnostic tool

DOE Office of Scientific and Technical Information (OSTI.GOV)

Clark, A

1967-10-19

This document presents the Pros and Cons of using a cloud chamber for field use. Historical aspects are briefly discussed. A cloud chamber experiment on Midi Mist is described. Plans for fielding an experiment on Hupmobile are presented.

Exceptional discovery of a shallow-water hydrothermal site in the SW area of Basiluzzo islet (Aeolian archipelago, South Tyrrhenian Sea): An environment to preserve.

PubMed

Esposito, Valentina; Andaloro, Franco; Canese, Simonepietro; Bortoluzzi, Giovanni; Bo, Marzia; Di Bella, Marcella; Italiano, Francesco; Sabatino, Giuseppe; Battaglia, Pietro; Consoli, Pierpaolo; Giordano, Patrizia; Spagnoli, Federico; La Cono, Violetta; Yakimov, Michail M; Scotti, Gianfranco; Romeo, Teresa

2018-01-01

The geological, biological and geochemical features of a particular field of hydrothermal vents, discovered in the Panarea Volcanic Complex during a research survey carried out in 2015, are described for the first time. The site, located at 70-80 m depth off the South-western coast of the islet of Basiluzzo, was named Smoking Land for the presence of a large number of wide and high active chimneys and was characterized in terms of dissolved benthic fluxes, associated macrofauna and megafauna communities and preliminary mineralogy and geochemistry of chimney structures. On the whole field, a total of 39 chimneys, different in size and shape, were closely observed and described; 14 of them showed emission of low temperature hydrothermal fluids of marine origin characterized by acidified chemical conditions. The CTD and benthic chamber measurements highlighted that the Smoking Land is able to form a sea water bottom layer characterized by variable acidity and high DIC and trace elements concentrations; these characteristics weaken moving away from the chimney mouths. The SEM-EDS analysis of the collected solid samples revealed a chimney structure principally composed by amorphous and low crystalline Fe-oxyhydroxides of hydrothermal origins. The ROV explorations revealed a wide coverage of red algae (Peyssonnelia spp.) colonized by the green algae Flabiella petiolata and by suspension feeders, mainly sponges, but also bryozoans, and tubicolous polychaetes. Although novent-exclusive species were identified, the benthic communities found in association to the chimneys included more taxa than those observed in the surrounding no-vent rocky areas. These first findings evidence a submarine dynamic habitat where geological, chemical and biological processes are intimately connected, making the Smoking Land an important site in terms of marine heritage that should be safeguarded and protected.

Characterization of available light for seagrass and patch reef productivity in Sugarloaf Key, Lower Florida Keys

USGS Publications Warehouse

Toro-Farmer, Gerardo; Muller-Karger, Frank E.; Vega-Rodriguez, Maria; Melo, Nelson; Yates, Kimberly K.; Johns, Elizabeth; Cerdeira-Estrada, Sergio; Herwitz, Stan R.

2016-01-01

Light availability is an important factor driving primary productivity in benthic ecosystems, but in situ and remote sensing measurements of light quality are limited for coral reefs and seagrass beds. We evaluated the productivity responses of a patch reef and a seagrass site in the Lower Florida Keys to ambient light availability and spectral quality. In situ optical properties were characterized utilizing moored and water column bio-optical and hydrographic measurements. Net ecosystem productivity (NEP) was also estimated for these study sites using benthic productivity chambers. Our results show higher spectral light attenuation and absorption, and lower irradiance during low tide in the patch reef, tracking the influx of materials from shallower coastal areas. In contrast, the intrusion of clearer surface Atlantic Ocean water caused lower values of spectral attenuation and absorption, and higher irradiance in the patch reef during high tide. Storms during the studied period, with winds >10 m·s−1, caused higher spectral attenuation values. A spatial gradient of NEP was observed, from high productivity in the shallow seagrass area, to lower productivity in deeper patch reefs. The highest daytime NEP was observed in the seagrass, with values of almost 0.4 g·O2·m−2·h−1. Productivity at the patch reef area was lower in May than during October 2012 (mean = 0.137 and 0.177 g·O2·m−2·h−1, respectively). Higher photosynthetic active radiation (PAR) levels measured above water and lower light attenuation in the red region of the visible spectrum (~666 to ~699 nm) had a positive correlation with NEP. Our results indicate that changes in light availability and quality by suspended or resuspended particles limit benthic productivity in the Florida Keys.

On diel variability of marine sediment backscattering properties caused by microphytobenthos photosynthesis: Impact of environmental factors

NASA Astrophysics Data System (ADS)

Gorska, Natalia; Kowalska-Duda, Ewa; Pniewski, Filip; Latała, Adam

2018-06-01

The study has been motivated by the development of the hydroacoustic techniques for mapping and classifying the benthic habitats and for the research of the microbenthos photosynthesis in the semi-enclosed Baltic Sea, particularly sensitive to human activity. The investigation of the effect of the benthic microalgal photosynthesis on the echo signal from the Baltic sandy sediments is continuing. The study clarifies the impact of the abiotic and biotic factors on the diel variation of the backscattering caused by the benthic microalgal photosynthetic activity. Five multiday laboratory experiments, different in hydrophysical or biological conditions, were conducted. During each measurement series, the "day" (illumination) and "night" (darkness) conditions (L:D cycle) were simulated and the diel variations of the echo energy of the backscattered signal were analyzed. The hydroacoustic data were acquired along with measuring biological and biooptical parameters and oxygen concentration. The study demonstrated the impact of microphytobenthos photosynthesis on the backscattering properties of the marine sediment which is sensitive to the illumination level, benthic microalgal biomass and macrozoobenthos bioturbation.

Time-response of cultured deep-sea benthic foraminifera to different algal diets

NASA Astrophysics Data System (ADS)

Heinz, P.; Hemleben, Ch; Kitazato, H.

2002-03-01

The vertical distribution of benthic foraminifera in the surface sediment is influenced by environmental factors, mainly by food and oxygen supply. An experiment of three different time series was performed to investigate the response of deep-sea benthic foraminifera to simulated phytodetritus pulses under stable oxygen concentrations. Each series was fed constantly with one distinct algal species in equivalent amounts. The temporal reactions of the benthic foraminifera with regard to the vertical distribution in the sediment, the total number, and the species composition were observed and compared within the three series. Additionally, oxygen contents and bacterial cell numbers were measured to ensure that these factors were invariable and did not influence foraminiferal communities. The addition of algae leads to higher population densities 21 days after food was added. Higher numbers of individuals were probably caused by higher organic levels, which in turn induced reproduction. A stronger response is found after feeding with Amphiprora sp. and Pyramimonas sp., compared to Dunaliella tertiolecta. At a constant high oxygen supply, no migration to upper layers was observed after food addition, and more individuals were found in deeper layers. The laboratory results thus agree with the predictions of the TROX-model. An epifaunal microhabitat preference was shown for Adercotryma glomerata. Hippocrepina sp. was spread over the entire sediment depth with a shallow infaunal maximum. Melonis barleeanum preferred a deeper infaunal habitat. Bacterial cell concentrations were stable during the laboratory experiments and showed no significant response to higher organic fluxes.

Foam Experiment Hardware are Flown on Microgravity Rocket MAXUS 4

NASA Astrophysics Data System (ADS)

Lockowandt, C.; Löth, K.; Jansson, O.; Holm, P.; Lundin, M.; Schneider, H.; Larsson, B.

2002-01-01

The Foam module was developed by Swedish Space Corporation and was used for performing foam experiments on the sounding rocket MAXUS 4 launched from Esrange 29 April 2001. The development and launch of the module has been financed by ESA. Four different foam experiments were performed, two aqueous foams by Doctor Michele Adler from LPMDI, University of Marne la Vallée, Paris and two non aqueous foams by Doctor Bengt Kronberg from YKI, Institute for Surface Chemistry, Stockholm. The foam was generated in four separate foam systems and monitored in microgravity with CCD cameras. The purpose of the experiment was to generate and study the foam in microgravity. Due to loss of gravity there is no drainage in the foam and the reactions in the foam can be studied without drainage. Four solutions with various stabilities were investigated. The aqueous solutions contained water, SDS (Sodium Dodecyl Sulphate) and dodecanol. The organic solutions contained ethylene glycol a cationic surfactant, cetyl trimethyl ammonium bromide (CTAB) and decanol. Carbon dioxide was used to generate the aqueous foam and nitrogen was used to generate the organic foam. The experiment system comprised four complete independent systems with injection unit, experiment chamber and gas system. The main part in the experiment system is the experiment chamber where the foam is generated and monitored. The chamber inner dimensions are 50x50x50 mm and it has front and back wall made of glass. The front window is used for monitoring the foam and the back window is used for back illumination. The front glass has etched crosses on the inside as reference points. In the bottom of the cell is a glass frit and at the top is a gas in/outlet. The foam was generated by injecting the experiment liquid in a glass frit in the bottom of the experiment chamber. Simultaneously gas was blown through the glass frit and a small amount of foam was generated. This procedure was performed at 10 bar. Then the pressure was lowered in the experiment chamber to approximately 0,1 bar to expand the foam to a dry foam that filled the experiment chamber. The foam was regenerated during flight by pressurise the cell and repeat the foam generation procedures. The module had 4 individual experiment chambers for the four different solutions. The four experiment chambers were controlled individually with individual experiment parameters and procedures. The gas system comprise on/off valves and adjustable valves to control the pressure and the gas flow and liquid flow during foam generation. The gas system can be divided in four sections, each section serving one experiment chamber. The sections are partly connected in two pairs with common inlet and outlet. The two pairs are supplied with a 1l gas bottle each filled to a pressure of 40 bar and a pressure regulator lowering the pressure from 40 bar to 10 bar. Two sections are connected to the same outlet. The gas outlets from the experiment chambers are connected to two symmetrical placed outlets on the outer structure with diffusers not to disturb the g-levels. The foam in each experiment chamber was monitored with one tomography camera and one overview camera (8 CCD cameras in total). The tomography camera is placed on a translation table which makes it possible to move it in the depth direction of the experiment chamber. The video signal from the 8 CCD cameras were stored onboard with two DV recorders. Two video signals were also transmitted to ground for real time evaluation and operation of the experiment. Which camera signal that was transmitted to ground could be selected with telecommands. With help of the tomography system it was possible to take sequences of images of the foam at different depths in the foam. This sequences of images are used for constructing a 3-D model of the foam after flight. The overview camera has a fixed position and a field of view that covers the total experiment chamber. This camera is used for monitoring the generation of foam and the overall behaviour of the foam. The experiment was performed successfully with foam generation in all 4 experiment chambers. Foam was also regenerated during flight with telecommands. The experiment data is under evaluation.

[Development of cloud chamber having thin-film entrance windows and proposal of practical training for beginners using X-ray equipment and unsealed radioactive material].

PubMed

Konishi, Yuki; Hayashi, Hiroaki; Takegami, Kazuki; Fukuda, Ikuma; Ueno, Junji

2014-01-01

A cloud chamber is a detector that can visualize the tracks of charged particles. Hayashi, et al. suggested a visualization experiment in which X-rays generated by diagnostic X-ray equipment were directed into a cloud chamber; however, there was a problem in that the wall of the cloud chamber scattered the incoming X-rays. In this study, we developed a new cloud chamber with entrance windows. Because these windows are made of thin film, we were able to direct the X-rays through them without contamination by scattered X-rays from the cloud chamber wall. We have newly proposed an experiment in which beta-particles emitted from radioisotopes are directed into a cloud chamber. We place shielding material in the cloud chamber and visualize the various shielding effects seen with the material positioned in different ways. During the experiment, electrons scattered in the air were measured quantitatively using GM counters. We explained the physical phenomena in the cloud chamber using Monte Carlo simulation code EGS5. Because electrons follow a tortuous path in air, the shielding material must be placed appropriately to be able to effectively block their emissions. Visualization of the tracks of charged particles in this experiment proved effective for instructing not only trainee radiological technologists but also different types of healthcare professionals.

Vertical visual features have a strong influence on cuttlefish camouflage.

PubMed

Ulmer, K M; Buresch, K C; Kossodo, M M; Mäthger, L M; Siemann, L A; Hanlon, R T

2013-04-01

Cuttlefish and other cephalopods use visual cues from their surroundings to adaptively change their body pattern for camouflage. Numerous previous experiments have demonstrated the influence of two-dimensional (2D) substrates (e.g., sand and gravel habitats) on camouflage, yet many marine habitats have varied three-dimensional (3D) structures among which cuttlefish camouflage from predators, including benthic predators that view cuttlefish horizontally against such 3D backgrounds. We conducted laboratory experiments, using Sepia officinalis, to test the relative influence of horizontal versus vertical visual cues on cuttlefish camouflage: 2D patterns on benthic substrates were tested versus 2D wall patterns and 3D objects with patterns. Specifically, we investigated the influence of (i) quantity and (ii) placement of high-contrast elements on a 3D object or a 2D wall, as well as (iii) the diameter and (iv) number of 3D objects with high-contrast elements on cuttlefish body pattern expression. Additionally, we tested the influence of high-contrast visual stimuli covering the entire 2D benthic substrate versus the entire 2D wall. In all experiments, visual cues presented in the vertical plane evoked the strongest body pattern response in cuttlefish. These experiments support field observations that, in some marine habitats, cuttlefish will respond to vertically oriented background features even when the preponderance of visual information in their field of view seems to be from the 2D surrounding substrate. Such choices highlight the selective decision-making that occurs in cephalopods with their adaptive camouflage capability.

The contribution of chemical fluxes across the sediment-water interface to carbon cycling in estuarine regions: A case study at the Rhône River mouth (NW Mediterranean)

NASA Astrophysics Data System (ADS)

Rassmann, Jens; Eitel, Eryn; Bombled, Bruno; Lansard, Bruno; Taillefert, Martial; Rabouille, Christophe

2016-04-01

Despite their small surface compared to the global oceans, continental shelf regions play a significant role in the global carbon cycle. Whereas shelf regions are seen as a sink for atmospheric CO2, estuarine regions are seen as a source. These regions are caracterized by the export of allochthonous terrigenous organic matter (OM) and the production of autochthonous marine organic carbon. An important fraction of this OM is mineralized in the sediments close to the river mouth. As a result, high exchange fluxes of dissolved inorganic carbon (DIC), total alkalinity (TA), oxygen and nutriments cross the sediment-water interface (SWI) and cause acidification of the bottom waters. Potentially, primary production in the water column is enhanced by these fluxes. Therefore, OM mineralisation in estuarine regions plays a key role in the carbon cycle as a direct producer of DIC and as a potential control factor for primary production. This work aims to quantify chemical fluxes through the SWI at the prodelta of the Rhone River (Mediterranen). In September 2015, a benthic chamber has been deployed at several stations in the prodelta to measure directly (in situ) fluxes of DIC, TA, ammonium and dissolved calcium at the SWI. At the same stations, in situ microprofiles of oxygen and pH have been recorded and sediment cores were taken for pore water extraction and analysis (DIC, TA, NH4+ and Ca2+). The results show a strong decrease of the fluxes in offshore direction indicating a strong variation of respiration rates in this direction. From pore water profiles, diffusive fluxes have been calculated and compared with the fluxes measured by the benthic chamber. This comparison enables us to include pore water profiles from previous investigations to calculate a carbon mass budget of this region.

Prospective Environmental Risk Assessment for Sediment-Bound Organic Chemicals: A Proposal for Tiered Effect Assessment.

PubMed

Diepens, Noël J; Koelmans, Albert A; Baveco, Hans; van den Brink, Paul J; van den Heuvel-Greve, Martine J; Brock, Theo C M

A broadly accepted framework for prospective environmental risk assessment (ERA) of sediment-bound organic chemicals is currently lacking. Such a framework requires clear protection goals, evidence-based concepts that link exposure to effects and a transparent tiered-effect assessment. In this paper, we provide a tiered prospective sediment ERA procedure for organic chemicals in sediment, with a focus on the applicable European regulations and the underlying data requirements. Using the ecosystem services concept, we derived specific protection goals for ecosystem service providing units: microorganisms, benthic algae, sediment-rooted macrophytes, benthic invertebrates and benthic vertebrates. Triggers for sediment toxicity testing are discussed.We recommend a tiered approach (Tier 0 through Tier 3). Tier-0 is a cost-effective screening based on chronic water-exposure toxicity data for pelagic species and equilibrium partitioning. Tier-1 is based on spiked sediment laboratory toxicity tests with standard benthic test species and standardised test methods. If comparable chronic toxicity data for both standard and additional benthic test species are available, the Species Sensitivity Distribution (SSD) approach is a more viable Tier-2 option than the geometric mean approach. This paper includes criteria for accepting results of sediment-spiked single species toxicity tests in prospective ERA, and for the application of the SSD approach. We propose micro/mesocosm experiments with spiked sediment, to study colonisation success by benthic organisms, as a Tier-3 option. Ecological effect models can be used to supplement the experimental tiers. A strategy for unifying information from various tiers by experimental work and exposure-and effect modelling is provided.

Impacts of exotic mangrove forests and mangrove deforestation on carbon remineralization and ecosystem functioning in marine sediments

USGS Publications Warehouse

Sweetman, A.K.; Middelburg, J.J.; Berle, A.M.; Bernardino, A.F.; Schander, C.; Demopoulos, A.W.J.; Smith, C.R.

2010-01-01

To evaluate how mangrove invasion and removal can modify benthic carbon cycling processes and ecosystem functioning, we used stable-isotopically labelled algae as a deliberate tracer to quantify benthic respiration and C-flow through macrofauna and bacteria in sediments collected from (1) an invasive mangrove forest, (2) deforested mangrove sites 2 and 6 years after removal of above-sediment mangrove biomass, and (3) two mangrove-free, control sites in the Hawaiian coastal zone. Sediment oxygen consumption (SOC) rates were significantly greater in the mangrove and mangrove removal site experiments than in controls and were significantly correlated with total benthic (macrofauna and bacteria) biomass and sedimentary mangrove biomass (SMB). Bacteria dominated short-term C-processing of added microalgal-C and benthic biomass in sediments from the invasive mangrove forest habitat. In contrast, macrofauna were the most important agents in the short-term processing of microalgal-C in sediments from the mangrove removal and control sites. Mean faunal abundance and short term C-uptake rates in sediments from both removal sites were significantly higher than in control cores, which collectively suggest that community structure and short-term C-cycling dynamics in habitats where mangroves have been cleared can remain fundamentally different from un-invaded mudflat sediments for at least 6-yrs following above-sediment mangrove removal. In summary, invasion by mangroves can lead to large shifts in benthic ecosystem function, with sediment metabolism, benthic community structure and short-term C-remineralization dynamics being affected for years following invader removal. ?? 2010 Author(s).

Dispersants as Used in Response to the MC252-Spill Lead to Higher Mobility of Polycyclic Aromatic Hydrocarbons in Oil-Contaminated Gulf of Mexico Sand

PubMed Central

Zuijdgeest, Alissa; Huettel, Markus

2012-01-01

After the explosion of the Deepwater Horizon oil rig, large volumes of crude oil were washed onto and embedded in the sandy beaches and sublittoral sands of the Northern Gulf of Mexico. Some of this oil was mechanically or chemically dispersed before reaching the shore. With a set of laboratory-column experiments we show that the addition of chemical dispersants (Corexit 9500A) increases the mobility of polycyclic aromatic hydrocarbons (PAHs) in saturated permeable sediments by up to two orders of magnitude. Distribution and concentrations of PAHs, measured in the solid phase and effluent water of the columns using GC/MS, revealed that the mobility of the PAHs depended on their hydrophobicity and was species specific also in the presence of dispersant. Deepest penetration was observed for acenaphthylene and phenanthrene. Flushing of the columns with seawater after percolation of the oiled water resulted in enhanced movement by remobilization of retained PAHs. An in-situ benthic chamber experiment demonstrated that aromatic hydrocarbons are transported into permeable sublittoral sediment, emphasizing the relevance of our laboratory column experiments in natural settings. We conclude that the addition of dispersants permits crude oil components to penetrate faster and deeper into permeable saturated sands, where anaerobic conditions may slow degradation of these compounds, thus extending the persistence of potentially harmful PAHs in the marine environment. Application of dispersants in nearshore oil spills should take into account enhanced penetration depths into saturated sands as this may entail potential threats to the groundwater. PMID:23209777

The STREON Recirculation Chamber: An Advanced Tool to Quantify Stream Ecosystem Metabolism in the Benthic Zone

NASA Astrophysics Data System (ADS)

Brock, J. T.; Utz, R.; McLaughlin, B.

2013-12-01

The STReam Experimental Observatory Network is a large-scale experimental effort that will investigate the effects of eutrophication and loss of large consumers in stream ecosystems. STREON represents the first experimental effort undertaken and supported by the National Ecological Observatory Network (NEON).Two treatments will be applied at 10 NEON sites and maintained for 10 years in the STREON program: the addition of nitrate and phosphate to enrich concentrations by five times ambient levels and electrical fields that exclude top consumers (i.e., fish or invertebrates) of the food web from the surface of buried sediment baskets. Following a 3-5 week period, the sediment baskets will be extracted and incubated in closed, recirculating metabolic chambers to measure rates of respiration, photosynthesis, and nutrient uptake. All STREON-generated data will be open access and available on the NEON web portal. The recirculation chamber represents a critical infrastructural component of STREON. Although researchers have applied such chambers for metabolic and nutrient uptake measurements in the past, the scope of STREON demands a novel design that addresses multiple processes often neglected by earlier models. The STREON recirculation chamber must be capable of: 1) incorporating hyporheic exchange into the flow field to ensure measurements of respiration include the activity of subsurface biota, 2) operating consistently with heterogeneous sediments from sand to cobble, 3) minimizing heat exchange from the motor and external environment, 4) delivering a reproducible uniform flow field over the surface of the sediment basket, and 5) efficient assembly/disassembly with minimal use of tools. The chamber also required a means of accommodating an optical dissolved oxygen probe and a means to inject/extract water. A prototype STREON chamber has been designed and thoroughly tested. The flow field within the chamber has been mapped using particle imaging velocimetry (PIV) under various velocity settings. The extent of exchange with the sediment was assessed by means of a saline tracer injection and adjustment using flow-regulating components was explored. Performance under a broad range of temperatures (1 to 30 °C) was assessed. Finally, a novel heat-exchange mechanism meant to minimize warming during operations was evaluated. All prototype assessments demonstrate the applicability of the STREON chamber under a broad range of conditions. Though the STREON recirculation chamber has been designed to satisfy the specific needs of the STREON program, the open-access nature of the NEON network should facilitate scope expansion in the coming decades. The STREON recirculation chamber design and all prototype testing data will be accessible to facilitate chamber use elsewhere. The large number of chamber assemblies required for STREON operations should facilitate the acquisition of units by researchers working outside of the NEON network. Furthermore, the current scope of STREON includes the use of the chambers only once annually, thus a valuable tool for stream ecosystem measurements will be readily available at STREON sites for potential use by researchers interested in such measurements.

The argonaut shell: gas-mediated buoyancy control in a pelagic octopus

PubMed Central

Finn, Julian K.; Norman, Mark D.

2010-01-01

Argonauts (Cephalopoda: Argonautidae) are a group of rarely encountered open-ocean pelagic octopuses with benthic ancestry. Female argonauts inhabit a brittle ‘paper nautilus’ shell, the role of which has puzzled naturalists for millennia. The primary role attributed to the shell has been as a receptacle for egg deposition and brooding. Our observations of wild argonauts have revealed that the thin calcareous shell also functions as a hydrostatic structure, employed by the female argonaut to precisely control buoyancy at varying depths. Female argonauts use the shell to ‘gulp’ a measured volume of air at the sea surface, seal off the captured gas using flanged arms and forcefully dive to a depth where the compressed gas buoyancy counteracts body weight. This process allows the female argonaut to attain neutral buoyancy at depth and potentially adjust buoyancy to counter the increased (and significant) weight of eggs during reproductive periods. Evolution of this air-capture strategy enables this negatively buoyant octopus to survive free of the sea floor. This major shift in life mode from benthic to pelagic shows strong evolutionary parallels with the origins of all cephalopods, which attained gas-mediated buoyancy via the closed-chambered shells of the true nautiluses and their relatives. PMID:20484241

Relationships between Algae, Benthic Herbivorous Invertebrates and Fishes in Rocky Sublittoral Communities of a Temperate Sea (Mediterranean)

NASA Astrophysics Data System (ADS)

Ruitton, S.; Francour, P.; Boudouresque, C. F.

2000-02-01

In situ surveys were used to examine the contribution of benthic herbivorous invertebrates and fishes to the organization of Mediterranean rocky sublittoral communities. Shallow (1-3 m) and deep (6-8 m) sampling sites, in natural areas and on man-made structures, were characterized by a structural complexity index (cavity index and mean size of cavity aperture), algal cover (encrusting, turfy, shrubby and arborescent algae) and the density of benthic herbivorous invertebrates and fish. A relationship between structural complexity and biota was only evident for some fish species ( Diplodus spp. and Sarpa salpa) at deep sites, where they not only feed but also shelter. Three benthic herbivorous invertebrates, the sea urchins Paracentrotus lividus and Arbacia lixula, and the limpet Patella caerulea , are associated with communities dominated by encrusting algae. Variations in their abundance and role in structuring algal communities follow a depth gradient: P. caerulea and A. lixula are mainly present at shallow sites and P. lividus at deep sites. These benthic herbivorous invertebrates may account for the structure of shallow algal communities. In contrast, at deep sites, fishes (the omnivorous Diplodus spp. and the herbivorous S. salpa) have a potential importance in controlling sublittoral algae, in addition to invertebrates. It is suggested that the ecological impact of herbivorous and omnivorous fishes in temperate seas could be greater than is generally thought. Experiments should be designed to validate this postulate.

Influence of internal waves on the dispersion and transport of inclined gravity currents

NASA Astrophysics Data System (ADS)

Hogg, C. A. R.; Pietrasz, V. B.; Ouellette, N. T.; Koseff, J. R.

2016-02-01

Brine discharge from desalination facilities presents environmental risks, particularly to benthic organisms. High concentrations of salt and chemical additives, which can be toxic to local ecosystems, are typically mitigated by dilution close to the source. Our laboratory experiments investigate how breaking internal tides can help to dilute gravity currents caused by desalination effluents and direct them away from the benthic layer. In laboratory experiments, internal waves at the pycnocline of an ambient stratification were directed towards a sloping shelf, down which ran a gravity current. The breaking internal waves were seen to increase the proportion of the fluid from the gravity current diverted away from the slope into an intrusion along the pycnocline. In a parametric study, increasing the amplitude of the internal wave was seen to increase the amount of dense fluid in the pycnocline intrusion. The amplitude required to divert the gravity current into the intrusion compares well with an analytical theory that equates the incident energy in the internal wave to the potential energy required to dilute the gravity current. These experimental results suggest that sites of breaking internal waves may be good sites for effluent disposal. Effluent diverted into the intrusion avoids the ecologically sensitive benthic layer.

Density-dependent effects of omnivorous stream crayfish on benthic trophic dynamics

USGS Publications Warehouse

Ludlam, J.P.; Banks, B. T.; Magoulick, Daniel D.

2015-01-01

Crayfish are abundant and important consumers in aquatic food webs and crayfish invasions have demonstrated strong effects of crayfish on multiple trophic levels. Density may be an important factor determining the role of omnivorous crayfish in benthic communities, especially if density alters the strength of trophic interactions. The effect of crayfish density on a simple benthic food web using ceramic tiles was examined in three treatments (crayfish exclusion cage, cage control (open to crayfish), and exposed ceramic tiles) in mesocosms stocked with 6, 12, or 18 crayfish·m-2. We hypothesized that at low densities crayfish consumption of herbivorous chironomids would increase algal abundance, but at high densities crayfish would reduce both periphyton and invertebrates. In the experiment, periphyton and chironomid abundance increased with declining crayfish biomass on day 30 but not day 15. The magnitude of crayfish effects on day 15 periphyton chlorophyll a abundance increased with crayfish biomass, but crayfish effects on day 30 periphyton chlorophyll a or chironomid biomass did not increase with crayfish biomass. In this experiment there was little evidence for a trophic cascade at low crayfish densities and strong omnivory by crayfish dominated trophic dynamics.

Benthic grazing in a eutrophic river: cascading effects of zoobenthivorous fish mask direct effects of herbivorous fish

PubMed Central

Cob Chaves, Daniel; Richter, Marc; Mewes, Daniela; Schneider, Jörg; Hübner, Dirk; Winkelmann, Carola

2018-01-01

Benthic grazing strongly controls periphyton biomass. The question therefore arises whether benthic grazing could be used as a tool to reduce excessive growth of periphyton in nutrient-enriched rivers. Although benthic invertebrate grazers reduce the growth of periphyton, this is highly context dependent. Here we assessed whether the only obligate herbivorous fish in European rivers, the common nase (Chondrostoma nasus L.), is able to reduce periphyton biomass in a eutrophic river. We conducted three consecutive in situ experiments at low, intermediate and high densities of nase in the river using standard tiles on the river bottom naturally covered with periphyton that were accessible to fish and tiles that excluded fish foraging with electric exclosures. The biomass of benthic invertebrate grazers was very low relative to nase. We hypothesised that nase would reduce periphyton biomass on accessible tiles and therefore expected higher periphyton biomass on the exclosure tiles, at least at intermediate and high densities of nase in the river. Contrary to our expectation, the impact of fish grazing was low even at high fish density, as judged by the significantly lower chlorophyll a concentration on exclosure tiles even though the ash-free dry mass on accessible and exclosure tiles did not differ. The lower chlorophyll a concentrations on exclosure tiles might be explained by a higher biomass of invertebrate grazers on the exclosure tiles, which would indicate that the effect of invertebrate grazers was stronger than that of herbivorous fish grazers. The high biomass of invertebrate grazers on exclosure tiles likely arose from the exclusion of zoobenthivorous fish, which occur in the river at high densities. The results of our small-scale experiments suggested that cascading top-down effects of zoobenthivorous fish have a higher impact on periphyton biomass than direct effects of herbivorous nase. PMID:29473006

Response of Benthic Microalgae to Phosphorus Inputs in Grand Bay National Estuarine Research Reserve

NASA Astrophysics Data System (ADS)

Sleek, J.; Caffrey, J. M.; Baine, G. C., II; Capps, R.

2016-12-01

Benthic microalgae are an important, but often understudied component of shallow, photic estuaries in the Gulf of Mexico. Grand Bay National Estuarine Research Reserve (GBNERR) is located in a small and relatively pristine estuary in the northern Gulf of Mexico. Freshwater input into the estuary is primarily local runoff from bayous and tidal creeks, including Bayou Cumbest, Bayou Heron, and Bangs Lake. Nutrient loading to Grand Bay is relatively small, with ambient nutrient concentrations often below detection. However, several events in 2005, 2012, 2013, and 2014 due to breaches in a containment levee from a gypsum stack have led to high phosphate levels near Bangs Lake. GBNERR staff assembled a phosphate working group to investigate scientific questions related to these phosphate loadings. This working group includes members from GBNERR, regional universities, marine labs, and Mississippi Department of Environmental Quality. In marine ecosystems, nitrogen availability normally limits growth of phytoplankton and previous research has shown this to be the case in Grand Bay. However, little is known about benthic microalgae in Grand Bay and what their response is to these phosphorus inputs. Between 2013 and 2015, summer concentrations of water column and benthic chlorophyll a were positively correlated, with the highest concentrations occurring in Bangs Lake. Benthic chlorophyll was also positively correlated with the percent surface irradiance reaching the bottom. Bottom light levels range from 3 to 36% surface irradiance. This along with experiments that showed no enhancement of growth of benthic microalgae following addition of nutrients (ammonium, phosphate or both) suggest that benthic microalgae are predominantly light limited rather than nutrient limited. Preliminary nitrogen fixation measurements suggest that nitrogen fixation was positively correlated with extractable phosphate concentrations. Thus, enhanced sediment nitrogen fixation and excess phosphate from the fertilizer plant runoff in this high light environment may enhance benthic microalgal production. The results of this research are part of the larger effort by the phosphate working group to understand the impact of repeated phosphate impacts. These results will provide information needed to help manage the reserve.

Response of Benthic Microalgae to Phosphorus Inputs in Grand Bay National Estuarine Research Reserve

NASA Astrophysics Data System (ADS)

Sleek, J.; Caffrey, J. M.; Baine, G. C., II; Capps, R.

2016-02-01

Benthic microalgae are an important, but often understudied component of shallow, photic estuaries in the Gulf of Mexico. Grand Bay National Estuarine Research Reserve (GBNERR) is located in a small and relatively pristine estuary in the northern Gulf of Mexico. Freshwater input into the estuary is primarily local runoff from bayous and tidal creeks, including Bayou Cumbest, Bayou Heron, and Bangs Lake. Nutrient loading to Grand Bay is relatively small, with ambient nutrient concentrations often below detection. However, several events in 2005, 2012, 2013, and 2014 due to breaches in a containment levee from a gypsum stack have led to high phosphate levels near Bangs Lake. GBNERR staff assembled a phosphate working group to investigate scientific questions related to these phosphate loadings. This working group includes members from GBNERR, regional universities, marine labs, and Mississippi Department of Environmental Quality. In marine ecosystems, nitrogen availability normally limits growth of phytoplankton and previous research has shown this to be the case in Grand Bay. However, little is known about benthic microalgae in Grand Bay and what their response is to these phosphorus inputs. Between 2013 and 2015, summer concentrations of water column and benthic chlorophyll a were positively correlated, with the highest concentrations occurring in Bangs Lake. Benthic chlorophyll was also positively correlated with the percent surface irradiance reaching the bottom. Bottom light levels range from 3 to 36% surface irradiance. This along with experiments that showed no enhancement of growth of benthic microalgae following addition of nutrients (ammonium, phosphate or both) suggest that benthic microalgae are predominantly light limited rather than nutrient limited. Preliminary nitrogen fixation measurements suggest that nitrogen fixation was positively correlated with extractable phosphate concentrations. Thus, enhanced sediment nitrogen fixation and excess phosphate from the fertilizer plant runoff in this high light environment may enhance benthic microalgal production. The results of this research are part of the larger effort by the phosphate working group to understand the impact of repeated phosphate impacts. These results will provide information needed to help manage the reserve.

Uptake of algal carbon and the likely synthesis of an "essential" fatty acid by Uvigerina ex. gr. semiornata (Foraminifera) within the Pakistan margin oxygen minimum zone: evidence from fatty acid biomarker and 13C tracer experiments

NASA Astrophysics Data System (ADS)

Larkin, K. E.; Gooday, A. J.; Woulds, C.; Jeffreys, R. M.; Schwartz, M.; Cowie, G.; Whitcraft, C.; Levin, L.; Dick, J. R.; Pond, D. W.

2014-07-01

Foraminifera are an important component of benthic communities in oxygen-depleted settings, where they potentially play a significant role in the processing of organic matter. We tracked the uptake of a 13C-labelled algal food source into individual fatty acids in the benthic foraminiferal species Uvigerina ex. gr. semiornata from the Arabian Sea oxygen minimum zone (OMZ). The tracer experiments were conducted on the Pakistan margin during the late/post monsoon period (August-October 2003). A monoculture of the diatom Thalassiosira weisflogii was 13C-labelled and used to simulate a pulse of phytoplankton in two complementary experiments. A lander system was used for in situ incubations at 140 m water depth and for 2.5 days in duration. Shipboard laboratory incubations of cores collected at 140 m incorporated an oxystat system to maintain ambient dissolved oxygen concentrations and were terminated after 5 days. Uptake of diatoms was rapid, with a high incorporation of diatom fatty acids into foraminifera after ~ 2 days in both experiments. Ingestion of the diatom food source was indicated by the increase over time in the quantity of diatom biomarker fatty acids in the foraminifera and by the high percentage of 13C in many of the fatty acids present at the endpoint of both in situ and laboratory-based experiments. These results indicate that

Effect of hypoxia and anoxia on invertebrate behaviour: ecological perspectives from species to community level

NASA Astrophysics Data System (ADS)

Riedel, B.; Pados, T.; Pretterebner, K.; Schiemer, L.; Steckbauer, A.; Haselmair, A.; Zuschin, M.; Stachowitsch, M.

2014-03-01

Coastal hypoxia and anoxia have become a global key stressor to marine ecosystems, with almost 500 dead zones recorded worldwide. By triggering cascading effects from the individual organism to the community- and ecosystem level, oxygen depletions threaten marine biodiversity and can alter ecosystem structure and function. By integrating both physiological function and ecological processes, animal behaviour is ideal for assessing the stress state of benthic macrofauna to low dissolved oxygen. The initial response of organisms can serve as an early warning signal, while the successive behavioural reactions of key species indicate hypoxia levels and help assess community degradation. Here we document the behavioural responses of a representative spectrum of benthic macrofauna in the natural setting in the Northern Adriatic Sea (Mediterranean). We experimentally induced small-scale anoxia with a benthic chamber in 24 m depth to overcome the difficulties in predicting the onset of hypoxia, which often hinders full documentation in the field. The behavioural reactions were documented with a time-lapse camera. Oxygen depletion elicited significant and repeatable changes in general (visibility, locomotion, body movement and posture, location) and species-specific reactions in virtually all organisms (302 individuals from 32 species and 2 species groups). Most atypical (stress) behaviours were associated with specific oxygen thresholds: arm-tipping in the ophiuroid Ophiothrix quinquemaculata, for example, with the onset of mild hypoxia (< 2 mL O2 L-1), the emergence of polychaetes on the sediment surface with moderate hypoxia (< 1 mL O2 L-1), the emergence of the infaunal sea urchin Schizaster canaliferus on the sediment with severe hypoxia (< 0.5 mL O2 L-1) and heavy body rotations in sea anemones with anoxia. Other species changed their activity patterns, for example the circadian rhythm in the hermit crab Paguristes eremita or the bioherm-associated crab Pisidia longimana. Intra- and interspecific reactions were weakened or changed: decapods ceased defensive and territorial behaviour, and predator-prey interactions and relationships shifted. This nuanced scale of resolution is a useful tool to interpret present benthic community status (behaviour) and past mortalities (community composition, e.g. survival of tolerant species). This information on the sensitivity (onset of stress response), tolerance (mortality, survival), and characteristics (i.e. life habit, functional role) of key species also helps predict potential future changes in benthic structure and ecosystem functioning. This integrated approach can transport complex ecological processes to the public and decision-makers and help define specific monitoring, assessment and conservation plans.

Effect of hypoxia and anoxia on invertebrate behaviour: ecological perspectives from species to community level

NASA Astrophysics Data System (ADS)

Riedel, B.; Pados, T.; Pretterebner, K.; Schiemer, L.; Steckbauer, A.; Haselmair, A.; Zuschin, M.; Stachowitsch, M.

2013-08-01

Coastal hypoxia and anoxia have become a global key stressor to marine ecosystems, with almost 500 dead zones recorded wordwide. By triggering cascading effects from the individual organism to the community and ecosystem-level, oxygen depletions threat marine biodiversity and can alter ecosystem structure and function. By integrating both physiological function and ecological processes, animal behaviour is ideal for assessing the stress state of benthic macrofauna to low dissolved oxygen. The initial response of organisms can serve as an early-warning signal, while the successive behavioural reactions of key species indicate hypoxia levels and help assess community degradation. Here we document the behavioural responses of a representative spectrum of benthic macrofauna in the natural setting in the Northern Adriatic Sea, Mediterranean. We experimentally induced small-scale anoxia with a benthic chamber in 24 m depth to overcome the difficulties in predicting the onset of hypoxia, which often hinders full documentation in the field. The behavioural reactions were documented with a time-lapse camera. Oxygen depletion elicited significant and repeatable changes in general (visibility, locomotion, body movement and posture, location) and species-specific reactions in virtually all organisms (302 individuals from 32 species and 2 species groups). Most atypical (stress) behaviours were associated with specific oxygen thresholds: arm-tipping in the ophiuroid Ophiothrix quinquemaculata, for example, with the onset of mild hypoxia (< 2 mL O2 L-1), the emergence of polychates on the sediment surface with moderate hypoxia (< 1 mL O2 L-1), the emergence of the infaunal sea urchin Schizaster canaliferus on the sediment with severe hypoxia (< 0.5 mL O2 L-1) and heavy body rotations in sea anemones with anoxia. Other species changed their activity patterns, i.e. circadian rhythm in the hermit crab Paguristes eremita or the bioherm-associated crab Pisidia longimana. Intra- and interspecific reactions were weakened or changed: decapods ceased defensive and territorial behaviour, and predator-prey interactions and relationships shifted. This nuanced scale of resolution is a useful tool to interpret present benthic community status (behaviour) and past mortalities (community composition, e.g. survival of tolerant species). This information on the sensitivity (onset of stress response), tolerance (mortality, survival), and characteristics (i.e. life habit, functional role) of key species also helps predict potential future changes in benthic structure and ecosystem functioning. This integrated approach can transport complex ecological processes to the public and decision-makers and help define specific monitoring, assessment and conservation plans.

Construction of an anechoic chamber for aeroacoustic experiments and examination of its acoustic parameters

NASA Astrophysics Data System (ADS)

Kopiev, V. F.; Palchikovskiy, V. V.; Belyaev, I. V.; Bersenev, Yu. V.; Makashov, S. Yu.; Khramtsov, I. V.; Korin, I. A.; Sorokin, E. V.; Kustov, O. Yu.

2017-01-01

The acoustic parameters of a new anechoic chamber constructed at Perm National Research Polytechnic University (PNRPU) are presented. This chamber is designed to be used, among other things, for measuring noise from aerodynamic sources. Sound-absorbing wedges lining the walls of the chamber were studied in an interferometer with normal wave incidence. The results are compared to the characteristics of sound-absorbing wedges of existing anechoic facilities. Metrological examination of the acoustic parameters of the PNRPU anechoic chamber demonstrates that free field conditions are established in it, which will make it possible to conduct quantitative acoustic experiments.

The ecology of the soft-bottom benthos of San Francisco Bay: a community profile

USGS Publications Warehouse

Nichols, Frederic H.; Pamatmat, Mario M.

1988-01-01

The profile provides a reference to the scientific information concerning the animals and plants of the bay's benthic communities, their importance to the bay ecosystem, and their value as a resource measured in human terms. Because there have been few process-oriented studies of the benthos of San Francisco Bay (e.g., field and laboratory rate-measurement experiments), the material presented herein is largely descriptive. Nonetheless, we have described the processes that interconnect the various physical, chemical, and biological components of the benthic environment, and the important couplings between this environment and the water column above, with reference to research results from other estuaries where necessary. We consider the role of the benthic community as a food source for fish, aquatic birds, and humans; as a consumer or degrader of organic materials including wastes; as a recycler of minerals and nutrients; and as an accumulator of pollutants.

Possible energetic linkage between primary production and deep-sea benthic archaea: insight from biogeochemical lipidomics

NASA Astrophysics Data System (ADS)

Takano, Yoshinori; Ohkouchi, Naohiko

2013-04-01

Marine archaea have been recognized as a cosmopolitan player for global carbon and nitrogen cycles in the water column and sub-seafloor environments. Recent molecular evidence based on lipids and DNA suggests that uncultured benthic archaea dominate biomass in marine sediment, implying past primary production is a crucial factor for their presently ongoing heterotrophy (e.g., 1-4). Focusing on benthic archaeal heterotrophic processes in deep-sea sediment, we preliminarily traced 13C-signature in archaeal lipids to determine de novo and salvage pathway by in situ 13C-experiment. On the basis of the differential 13C-uptake, we suggest that benthic archaea recycles sedimentary relic membrane lipids to minimize the energy expenditure during 405 days (5). The 16S rRNA and quantitative PCR analysis indicated a community shift in the composition of the benthic archaeal community (e.g., Marine Group I, Marine Benthic Group, Miscellaneous Crenarchaeotic Group). In bacteria and eukarya, it is commonly recognized that free fatty acids are incorporated into cells and converted to acyl-CoA, which are eventually incorporated into membrane lipids as a salvage pathway (cf. 6). Considering the suggestion of salvage pathway in archaeal membrane synthesis (7,8), we discuss archaeal heterotrophic processes in terms of possible biogeochemical lipidomics. Reference [1] Biddle et al., (2006) PNAS, 103, 3846-3851. [2] Lipp et al., (2008) Nature, 454, 991-994. [3] Kallmeyer et al., (2012) PNAS, doi: 10.1073/pnas.1203849109 [4] Hinrichs and Inagaki, (2012) Science, 338, 204-205. [5] Takano et al., (2010) Nature Geosci., 3, 858-861. [6] Silbert et al., (1968) J Bacteriol., 95, 1658-1665. [7] Poulter et al., (1988) JACS, 110, 2620-2624. [8] Ohnuma et al., (1996) J Biochem., 119, 541-547.

Benthic Primary Production Budget of a Caribbean Reef Lagoon (Puerto Morelos, Mexico)

PubMed Central

Naumann, Malik S.; Jantzen, Carin; Haas, Andreas F.; Iglesias-Prieto, Roberto; Wild, Christian

2013-01-01

High photosynthetic benthic primary production (P) represents a key ecosystem service provided by tropical coral reef systems. However, benthic P budgets of specific ecosystem compartments such as macrophyte-dominated reef lagoons are still scarce. To address this, we quantified individual and lagoon-wide net (Pn) and gross (Pg) primary production by all dominant functional groups of benthic primary producers in a typical macrophyte-dominated Caribbean reef lagoon near Puerto Morelos (Mexico) via measurement of O2 fluxes in incubation experiments. The photosynthetically active 3D lagoon surface area was quantified using conversion factors to allow extrapolation to lagoon-wide P budgets. Findings revealed that lagoon 2D benthic cover was primarily composed of sand-associated microphytobenthos (40%), seagrasses (29%) and macroalgae (27%), while seagrasses dominated the lagoon 3D surface area (84%). Individual Pg was highest for macroalgae and scleractinian corals (87 and 86 mmol O2 m−2 specimen area d−1, respectively), however seagrasses contributed highest (59%) to the lagoon-wide Pg. Macroalgae exhibited highest individual Pn rates, but seagrasses generated the largest fraction (51%) of lagoon-wide Pn. Individual R was highest for scleractinian corals and macroalgae, whereas seagrasses again provided the major lagoon-wide share (68%). These findings characterise the investigated lagoon as a net autotrophic coral reef ecosystem compartment revealing similar P compared to other macrophyte-dominated coastal environments such as seagrass meadows and macroalgae beds. Further, high lagoon-wide P (Pg: 488 and Pn: 181 mmol O2 m−2 lagoon area d−1) and overall Pg:R (1.6) indicate substantial benthic excess production within the Puerto Morelos reef lagoon and suggest the export of newly synthesised organic matter to surrounding ecosystems. PMID:24367570

Benthic response to the sedimentation of particulate organic matter at the BIOTRANS station, 47°N, 20°W

NASA Astrophysics Data System (ADS)

Pfannkuche, O.

The benthic response to the sedimentation of particulate organic matter (POM) was investigated during 1985-1990 at 47°N, 20°W (BIOTRANS station). The first noticeable annual sedimentation of phytodetritus, as indicated by chlorophyll a concentrations in the sediment, occurred as early as late April-early May. Maximum amounts were found in June-July. Two different sedimentation pulses to the sea bed are described that demonstrate interannual variation: the occurrence of salp faecal pellets early in the year 1988 and the massive fall out of a plankton bloom in summer 1986, which deposited approximately 15 mmol C m -2. The benthic reaction to POM pulses was quite diverse. The mega-, macro- and meiobenthos showed no change in biomass, whereas bacterial biomass doubled between March and July. This corresponds to a seasonal maximum of total adenylate biomass. The relative abundance of Foraminifera among the meiobenthos increased during the summer. Benthic activity (ATP, ratio ATP/ETSA), as well as in situ sediment community oxygen consumption rates (SCOC), showed distinct seasonal maxima in July-August of 0.75 mmol C m -2 day -1. Based on SCOC and the carbon demand for growth, a benthic carbon consumption of 0.94 mmol C m -2 day -1 was estimated. This represents about 1.1% of spring bloom primary production and 9.6% of the export flux beneath the 150 m layer, measured during the North Atlantic Bloom Experiment. Bacteria and protozoans colonizing the epibenthic phytodetrital layer were responsible for 60-80% of the seasonal increase in SCOC. The strong reaction of the smaller benthic size groups (bacteria, protozoans) to POM pulses stresses their particular importance for sediment-water interface flux rates.

Investigation of particle and vapor wall-loss effects on controlled wood-smoke smog-chamber experiments

NASA Astrophysics Data System (ADS)

Bian, Q.; May, A. A.; Kreidenweis, S. M.; Pierce, J. R.

2015-10-01

Smog chambers are extensively used to study processes that drive gas and particle evolution in the atmosphere. A limitation of these experiments is that particles and gas-phase species may be lost to chamber walls on shorter timescales than the timescales of the atmospheric processes being studied in the chamber experiments. These particle and vapor wall losses have been investigated in recent studies of secondary organic aerosol (SOA) formation, but they have not been systematically investigated in experiments of primary emissions from combustion. The semi-volatile nature of combustion emissions (e.g. from wood smoke) may complicate the behavior of particle and vapor wall deposition in the chamber over the course of the experiments due to the competition between gas/particle and gas/wall partitioning. Losses of vapors to the walls may impact particle evaporation in these experiments, and potential precursors for SOA formation from combustion may be lost to the walls, causing underestimations of aerosol yields. Here, we conduct simulations to determine how particle and gas-phase wall losses contributed to the observed evolution of the aerosol during experiments in the third Fire Lab At Missoula Experiment (FLAME III). We use the TwO-Moment Aerosol Sectional (TOMAS) microphysics algorithm coupled with the organic volatility basis set (VBS) and wall-loss formulations to examine the predicted extent of particle and vapor wall losses. We limit the scope of our study to the dark periods in the chamber before photo-oxidation to simplify the aerosol system for this initial study. Our model simulations suggest that over one-third of the initial particle-phase organic mass (41 %) was lost during the experiments, and over half of this particle-organic mass loss was from direct particle wall loss (65 % of the loss) with the remainder from evaporation of the particles driven by vapor losses to the walls (35 % of the loss). We perform a series of sensitivity tests to understand uncertainties in our simulations. Uncertainty in the initial wood-smoke volatility distribution contributes 18 % uncertainty to the final particle-organic mass remaining in the chamber (relative to base-assumption simulation). We show that the total mass loss may depend on the effective saturation concentration of vapor with respect to the walls as these values currently vary widely in the literature. The details of smoke dilution during the filling of smog chambers may influence the mass loss to the walls, and a dilution of ~ 25:1 during the experiments increased particle-organic mass loss by 33 % compared to a simulation where we assume the particles and vapors are initially in equilibrium in the chamber. Finally, we discuss how our findings may influence interpretations of emission factors and SOA production in wood-smoke smog-chamber experiments.

Investigation of particle and vapor wall-loss effects on controlled wood-smoke smog-chamber experiments

NASA Astrophysics Data System (ADS)

Bian, Q.; May, A. A.; Kreidenweis, S. M.; Pierce, J. R.

2015-06-01

Smog chambers are extensively used to study processes that drive gas and particle evolution in the atmosphere. A limitation of these experiments is that particles and gas-phase species may be lost to chamber walls on shorter timescales than the timescales of the atmospheric processes being studied in the chamber experiments. These particle and vapor wall losses have been investigated in recent studies of secondary organic aerosol (SOA) formation, but they have not been systematically investigated in experiments of primary emissions from combustion. The semi-volatile nature of combustion emissions (e.g. from wood smoke) may complicate the behavior of particle and vapor wall deposition in the chamber over the course of the experiments due to the competition between gas/particle and gas/wall partitioning. Losses of vapors to the walls may impact particle evaporation in these experiments, and potential precursors for SOA formation from combustion may be lost to the walls, causing underestimates of aerosol yields. Here, we conduct simulations to determine how particle and gas-phase wall losses contributed to the observed evolution of the aerosol during experiments in the third Fire Lab At Missoula Experiment (FLAME III). We use the TwO-Moment Aerosol Sectional (TOMAS) microphysics algorithm coupled with the organic volatility basis set (VBS) and wall-loss formulations to examine the predicted extent of particle and vapor wall losses. We limit the scope of our study to the dark periods in the chamber before photo-oxidation to simplify the aerosol system for this initial study. Our model simulations suggest that over one third of the initial particle-phase organic mass (36%) was lost during the experiments, and roughly half of this particle organic mass loss was from direct particle wall loss (56% of the loss) with the remainder from evaporation of the particles driven by vapor losses to the walls (44% of the loss). We perform a series of sensitivity tests to understand uncertainties in our simulations. Uncertainty in the initial wood-smoke volatility distribution contributes 23% uncertainty to the final particle organic mass remaining in the chamber (relative to base-assumptions simulation). We show that the total mass loss may depend on the effective saturation concentration of vapor with respect to the walls as these values currently vary widely in the literature. The details of smoke dilution during the filling of smog chambers may influence the mass loss to the walls, and a dilution of ~ 25:1 during the experiments increased particle organic mass loss by 64% compared to a simulation where we assume the particles and vapors are initially in equilibrium in the chamber. Finally, we discuss how our findings may influence interpretations of emission factors and SOA production in wood-smoke smog-chamber experiments.

The matching law in and within groups of rats1

PubMed Central

Graft, D. A.; Lea, S. E. G.; Whitworth, T. L.

1977-01-01

In each of the two experiments, a group of five rats lived in a complex maze containing four small single-lever operant chambers. In two of these chambers, food was available on variable-interval schedules of reinforcement. In Experiment I, nine combinations of variable intervals were used, and the aggregate lever-pressing rates (by the five rats together) were studied. The log ratio of the rates in the two chambers was linearly related to the log ratio of the reinforcement rates in them; this is an instance of Herrnstein's matching law, as generalized by Baum. Summing over the two food chambers, food consumption decreased, and response output increased, as the time required to earn each pellet increased. In Experiment II, the behavior of individual rats was observed by time-sampling on selected days, while different variable-interval schedules were arranged in the two chambers where food was available. Individual lever-pressing rates for the rats were obtained, and their median bore the same “matching” relationship to the reinforcement rates as the group aggregate in Experiment I. There were differences between the rats in their distribution of time and responses between the two food chambers; these differences were correlated with differences in the proportions of reinforcements the rats obtained from each chamber. PMID:16811975

Testing the effect of increased temperature and river water input on benthic and pelagic metabolism using a large scale experimental pond ecosystem

NASA Astrophysics Data System (ADS)

Rodriguez, Patricia; Geibrink, Erik; Vasconcelos, Francisco; Hedström, Per; Byström, Pär; Karlsson, Jan

2013-04-01

We performed a large scale experimental study to test the effect of increased temperatures and concentration of allochthonous dissolved organic carbon (DOC) on benthic and pelagic primary production and respiration. The experiment was carried out during one ice-free season (May-October 2012) in a clear-water pond ecosystem divided into 16 enclosures (each 120 m3 and 1.6 m deep) including natural benthic and pelagic habitats and fish as top consumers (40 adult three-spine sticklebacks were introduced at the beginning of the experiment). Treatments included input of brown river water (23 mg/L in DOC) and heating (3° C above ambient temperature) in a factorial design: 4 enclosures were kept as controls (clear-cold), 4 enclosures were heated (clear-hot), 4 received river water (dark-cold) and 4 were both heated and received river water (dark-hot). Physical and chemical variables were monitored weekly meanwhile benthic, pelagic and ecosystems metabolism were estimated from free-water oxygen data and incubation studies. The 3° C difference in temperature between hot and cold enclosures was consistent during the study and DOC concentrations averaged 4 and 8 mg/L in clear water and dark enclosures, respectively; without any interaction effect between temperature and DOC concentration. Vertical light attenuation coefficient (Kd) showed significant differences between treatments with (0.62±0.40 m-1) and without river water (0.24±0.13 m-1). Total nitrogen concentrations ranged between 187 and 300 μg/L, with higher values in the dark-cold enclosures. The same pattern of higher values in dark-cold enclosures was found in phytoplankton chlorophyll a and primary production. Preliminary results show that gross benthic primary production (higher in clear-cold enclosures) largely exceeded phytoplankton production at the beginning of the experiment. Due to high respiration compared to gross primary production the net ecosystem production was in general negative in the pelagic habitat and did not show any effect of temperature or river water treatment. Our results suggest that input of river water may affect relatively shallow lake ecosystems differently compared to what is generally assumed based on studies of deeper systems.

Influence of a dominant consumer species reverses at increased diversity.

PubMed

Brandt, Margarita; Witman, Jon D; Chiriboga, Angel I

2012-04-01

Theory and experiments indicate that changes in consumer diversity affect benthic community structure and ecosystem functioning. Although the effects of consumer diversity have been tested in the laboratory and the field, little is known about effects of consumer diversity in the subtidal zone, one of the largest marine habitats. We investigated the grazing effects of sea urchins on algal abundance and benthic community structure in a natural subtidal habitat of the Galápagos Islands. Three species of urchins (Eucidaris, Lytechinus, and Tripneustes) were manipulated in inclusion cages following a replacement design with three levels of species richness (one, two, and three species) with all possible two-species urchin combinations. Identity was the main factor accounting for changes in the percentage of substrate grazed and benthic community structure. Two out of the three two-species assemblages grazed more than expected, suggesting a richness effect, but analyses revealed that this increased grazing was due to a sampling effect of the largest and commercially valued urchin species, Tripneustes. Benthic community structure in treatments with Eucidaris, Lytechinus, and Tripneustes alone was significantly different at the end of the experiment, suggesting that resource use differentiation occurred. Communities in Tripneustes enclosures were characterized by abundant crustose coralline algae and grazed substrate, while those without it contained abundant green foliose algae (Ulva sp.). An unexpected emergent property of the system was that the most species-rich urchin assemblage underyielded, grazing less than any other assemblage with Tripneustes, effectively reversing its dominant influence observed in the two-species treatments. While further experiments are needed to discern the mechanisms of underyielding, it may be related to changing interspecific interactions as richness increases from two to three species or to density-dependent Tripneustes grazing. This study highlights the general importance of evaluating consumer richness effects across the entire range of species richness considered, as the performance of the most species-rich consumer assemblage could not be predicted by manipulations of intermediate levels of consumer species richness.

Effect of bottom water oxygenation on oxygen consumption and benthic biogeochemical processes at the Crimean Shelf (Black Sea)

NASA Astrophysics Data System (ADS)

Lichtschlag, A.; Janssen, F.; Wenzhöfer, F.; Holtappels, M.; Struck, U.; Jessen, G.; Boetius, A.

2012-04-01

Hypoxia occurs where oxygen concentrations fall below a physiological threshold of many animals, usually defined as <63 µmol L-1. Oxygen depletion can be caused by anthropogenic influences, such as global warming and eutrophication, but as well occurs naturally due to restricted water exchange in combination with high nutrient loads (e.g. upwelling). Bottom-water oxygen availability not only influences the composition of faunal communities, but is also one of the main factors controlling sediment-water exchange fluxes and organic carbon degradation in the sediment, usually shifting processes towards anaerobic mineralization pathways mediated by microorganisms. The Black Sea is one of the world's largest meromictic marine basins with an anoxic water column below 180m. The outer shelf edge, where anoxic waters meet the seafloor, is an ideal natural laboratory to study the response of benthic ecosystems to hypoxia, including benthic biogeochemical processes. During the MSM 15/1 expedition with the German research vessel MARIA S. MERIAN, the NW area of the Black Sea (Crimean Shelf) was studied. The study was set up to investigate the influence of bottom water oxygenation on, (1) the respective share of fauna-mediated oxygen uptake, microbial respiration, or re-oxidation of reduced compounds formed in the deeper sediments for the total oxygen flux and (2) on the efficiency of benthic biogeochemical cycles. During our study, oxygen consumption and pathways of organic carbon degradation were estimated from benthic chamber incubations, oxygen microprofiles measured in situ, and pore water and solid phase profiles measured on retrieved cores under oxic, hypoxic, and anoxic water column conditions. Benthic oxygen fluxes measured in Crimean Shelf sediments in this study were comparable to fluxes from previous in situ and laboratory measurements at similar oxygen concentrations (total fluxes -8 to -12 mmol m-2 d-1; diffusive fluxes: -2 to -5 mmol m-2 d-1) with oxygen penetrating less than 5 mm into the seafloor. In total oxygen uptake by the seafloor, the fraction of the diffusive flux, which comprises microbial consumption plus re-oxidation of reduced compounds, increased with declining oxygen concentrations. Measurements and modeling of penetration depths and fluxes of the electron acceptors nitrate, iron- and manganese oxides, sulfate suggest that as long as oxygen is available in the oxic and the hypoxic zones of the Crimean shelf, the largest fraction of oxygen is consumed directly during aerobic mineralization of organic matter and re-oxidation processes play only a minor role. Furthermore, the combination of rapid and strong fluctuation of bottom water oxygen concentration and low sedimentation rates appear to repress anaerobic organic matter degradation. This study was carried out within the framework of the EU-funded project HYPOX (www.hypox.net), which is set up to improve our understanding of hypoxia formation and to develop capacities and know-how for hypoxia monitoring.

Large area emulsion chamber experiments for the Space Shuttle

NASA Technical Reports Server (NTRS)

Parnell, T. A.

1985-01-01

Emulsion-chamber experiments employing nuclear-track emulsions, etchable plastic detectors, metal plates, and X-ray films continue to demonstrate high productivity and potential in the study of cosmic-ray primaries and their interactions. Emulsions, with unsurpassed track-recording capability, provide an appropriate medium for the study of nucleus-nucleus interactions at high energy, which will likely produce observations of a phase change in nuclear matter. The many advantages of emulsion chambers (excellent multitrack recording capability, large geometry factor, low apparatus cost, simplicity of design and construction) are complemented by the major advantages of the Space Shuttle as an experiment carrier. A Shuttle experiment which could make a significant advance in both cosmic-ray primary and nucleus-nucleus interaction studies is described. Such an experiment would serve as a guide for use of emulsions during the Space Station era. Some practical factors that must be considered in planning a Shuttle exposure of emulsion chambers are discussed.

Telerobotic Tending of Space Based Plant Growth Chamber

NASA Technical Reports Server (NTRS)

Backes, P. G.; Long, M. K.; Das, H.

1994-01-01

The kinematic design of a telerobotic mechanism for tending a plant growth space science experiment chamber is described. Ground based control of tending mechanisms internal to space science experiments will allow ground based principal investigators to interact directly with their space science experiments.

Drift chamber readout system of the DIRAC experiment

NASA Astrophysics Data System (ADS)

Afanasyev, L.; Karpukhin, V.

2002-10-01

A drift chamber readout system of the DIRAC experiment at CERN is presented. The system is intended to read out the signals from planar chambers operating in a high current mode. The sense wire signals are digitized in the 16-channel time-to-digital converter boards which are plugged in the signal plane connectors. This design results in a reduced number of modules, a small number of cables and high noise immunity. The system has been successfully operating in the experiment since 1999.

Plant growth chamber design for subambient pCO2 and δ13 C studies.

PubMed

Hagopian, William M; Schubert, Brian A; Graper, Robert A; Jahren, A Hope

2018-05-23

Subambient pCO 2 has persisted across the major Phanerozoic ice ages, including the entire late Cenozoic (~30 Ma to present). Stable isotope analysis of plant-derived organic matter is used to infer changes in pCO 2 and climate in the geologic past, but a growth chamber that can precisely control environmental conditions, including pCO 2 and δ 13 C value of CO 2 (δ 13 C CO2 ) at subambient pCO 2 , is lacking. We designed and built five identical chambers specifically for plant growth under stable subambient pCO 2 (~100 to 400 ppm) and δ 13 C CO2 conditions. We tested the pCO 2 and δ 13 C CO2 stability of the chambers both with and without plants, across two 12-hour daytime experiments and two extended 9-day experiments. We also compared the temperature and relative humidity conditions among the chambers. The average δ 13 C CO2 value within the five chambers ranged from -18.76 ‰ to -19.10 ‰; the standard deviation never exceeded 0.14 ‰ across any experiment. This represents better δ 13 C CO2 stability than that achieved by all previous chamber designs, including superambient pCO 2 chambers. Every pCO 2 measurement (n = 1225) was within 5 % of mean chamber values. The temperature and relative humidity conditions differed by no more than 1.6 % and 0.4 °C, respectively, across all chambers within each growth experiment. This growth chamber design extends the range of pCO 2 conditions for which plants can be grown for δ 13 C analysis of their tissues at subambient levels. This new capability allows for careful isolation of environmental effects on plant 13 C discrimination across the entire range of pCO 2 experienced by terrestrial land plants. This article is protected by copyright. All rights reserved.

A Simulated Stream Ecology Study.

ERIC Educational Resources Information Center

Zampella, Robert A.

1979-01-01

Describes a simulated field experience to study stream ecology in the classroom. Secondary students determine the composition of the stream community, describe the distribution of the benthic invertebrates, and design a food web. (Author/MA)

Isothermal Dendritic Growth Experiment - Science, engineering, and hardware development for USMP space flights

NASA Technical Reports Server (NTRS)

Glicksman, M. E.; Hahn, R. C.; Koss, M. B.; Tirmizi, S. H.; Selleck, M. E.; Velosa, A.; Winsa, E.

1991-01-01

The Isothermal Dendritic Growth Experiment (IDGE) has been designed to provide microgravity data on dendritic growth for a critical test of theory. This paper updates progress on constructing a crystal growth chamber suitable for space flight. The IDGE chamber is constructed from glass and stainless steel and is hermetically sealed by electron beam welds and glass-metal seals. Initial tests of the chambers sample's melting point plateau show that the new chamber design is capable of preserving the 99.9995 percent purity of succinonitrile. Dendrite growth can be initiated in the center of the IDGE chamber by means of thermo-electric coolers and a capillary injector tube (stinger). The new IDGE chamber is ready for fully integrated tests with the prototype IDGE engineering hardware at NASA's Lewis Research Center.

Evidence of hypoxic foraging forays by yellow perch (Perca flavescens) and potential consequences for prey consumption

USGS Publications Warehouse

Roberts, James J.; Grecay, Paul A.; Ludsin, Stuart A.; Pothoven, Steve A.; Vanderploeg, Henry A.; Höök, Tomas O.

2012-01-01

Previous studies in a variety of ecosystems have shown that ecologically and economically important benthic and bentho-pelagic fishes avoid hypoxic (−1) habitats by moving vertically or horizontally to more oxygenated areas. While avoidance of hypoxic conditions generally leads to a complete shift away from preferred benthic prey, some individual fish continue to consume benthic prey items in spite of bottom hypoxia, suggesting complex habitat utilisation and foraging patterns. For example, Lake Erie yellow perch (Perca flavescens) continue to consume benthic prey, despite being displaced vertically and horizontally by hypolimnetic hypoxia. We hypothesised that hypolimnetic hypoxia can negatively affect yellow perch by altering their distribution and inducing energetically expensive foraging behaviour. To test this hypothesis, we used drifting hydroacoustics and trawl sampling to quantify water column distribution, sub-daily vertical movement and foraging behaviour of yellow perch within hypoxic and normoxic habitats of Lake Erie’s central basin during August-September 2007. We also investigated the effects of rapid changes in ambient oxygen conditions on yellow perch consumption potential by exposing yellow perch to various static and fluctuating oxygen conditions in a controlled laboratory experiment. Our results indicate that, while yellow perch in general avoid hypoxic conditions, some individuals undertake foraging forays into hypoxic habitats where they experience greater fluctuations in abiotic conditions (pressure, temperature and oxygen concentration) than at normoxic sites. However, laboratory results suggest short-term exposure to low oxygen conditions did not negatively impact consumption potential of yellow perch. Detailed understanding of sub-daily individual behaviours may be crucial for determining interactive individual- and ecosystem-level effects of stressors such as hypoxia.

Investigation of particle and vapor wall-loss effects on controlled wood-smoke smog-chamber experiments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bian, Q.; May, A. A.; Kreidenweis, Sonia M.

Here, smog chambers are extensively used to study processes that drive gas and particle evolution in the atmosphere. A limitation of these experiments is that particles and gas-phase species may be lost to chamber walls on shorter timescales than the timescales of the atmospheric processes being studied in the chamber experiments. These particle and vapor wall losses have been investigated in recent studies of secondary organic aerosol (SOA) formation, but they have not been systematically investigated in experiments of primary emissions from combustion. The semi-volatile nature of combustion emissions (e.g. from wood smoke) may complicate the behavior of particle andmore » vapor wall deposition in the chamber over the course of the experiments due to the competition between gas/particle and gas/wall partitioning. Losses of vapors to the walls may impact particle evaporation in these experiments, and potential precursors for SOA formation from combustion may be lost to the walls, causing underestimations of aerosol yields. Here, we conduct simulations to determine how particle and gas-phase wall losses contributed to the observed evolution of the aerosol during experiments in the third Fire Lab At Missoula Experiment (FLAME III). We use the TwO-Moment Aerosol Sectional (TOMAS) microphysics algorithm coupled with the organic volatility basis set (VBS) and wall-loss formulations to examine the predicted extent of particle and vapor wall losses. We limit the scope of our study to the dark periods in the chamber before photo-oxidation to simplify the aerosol system for this initial study. Our model simulations suggest that over one-third of the initial particle-phase organic mass (41 %) was lost during the experiments, and over half of this particle-organic mass loss was from direct particle wall loss (65 % of the loss) with the remainder from evaporation of the particles driven by vapor losses to the walls (35 % of the loss). We perform a series of sensitivity tests to understand uncertainties in our simulations. Uncertainty in the initial wood-smoke volatility distribution contributes 18 % uncertainty to the final particle-organic mass remaining in the chamber (relative to base-assumption simulation). We show that the total mass loss may depend on the effective saturation concentration of vapor with respect to the walls as these values currently vary widely in the literature. The details of smoke dilution during the filling of smog chambers may influence the mass loss to the walls, and a dilution of ~ 25:1 during the experiments increased particle-organic mass loss by 33 % compared to a simulation where we assume the particles and vapors are initially in equilibrium in the chamber. Finally, we discuss how our findings may influence interpretations of emission factors and SOA production in wood-smoke smog-chamber experiments.« less

Ultrahigh vacuum/high pressure chamber for surface x-ray diffraction experiments

NASA Astrophysics Data System (ADS)

Bernard, P.; Peters, K.; Alvarez, J.; Ferrer, S.

1999-02-01

We describe an ultrahigh vacuum chamber that can be internally pressurized to several bars and that is designed to perform surface x-ray diffraction experiments on solid-gas interfaces. The chamber has a cylindrical beryllium window that serves as the entrance and exit for the x rays. The sample surface can be ion bombarded with an ancillary ion gun and annealed to 1200 K.

EPA GAS PHASE CHEMISTRY CHAMBER STUDIES

EPA Science Inventory

Gas-phase smog chamber experiments are being performed at EPA in order to evaluate a number of current chemical mechanisms for inclusion in EPA regulatory and research models. The smog chambers are 9000 L in volume and constructed of 2-mil teflon film. One of the chambers is co...

Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera.

PubMed

Prazeres, Martina; Uthicke, Sven; Pandolfi, John M

2015-03-22

Large benthic foraminifera are significant contributors to sediment formation on coral reefs, yet they are vulnerable to ocean acidification. Here, we assessed the biochemical and morphological impacts of acidification on the calcification of Amphistegina lessonii and Marginopora vertebralis exposed to different pH conditions. We measured growth rates (surface area and buoyant weight) and Ca-ATPase and Mg-ATPase activities and calculated shell density using micro-computer tomography images. In A. lessonii, we detected a significant decrease in buoyant weight, a reduction in the density of inner skeletal chambers, and an increase of Ca-ATPase and Mg-ATPase activities at pH 7.6 when compared with ambient conditions of pH 8.1. By contrast, M. vertebralis showed an inhibition in Mg-ATPase activity under lowered pH, with growth rate and skeletal density remaining constant. While M. vertebralis is considered to be more sensitive than A. lessonii owing to its high-Mg-calcite skeleton, it appears to be less affected by changes in pH, based on the parameters assessed in this study. We suggest difference in biochemical pathways of calcification as the main factor influencing response to changes in pH levels, and that A. lessonii and M. vertebralis have the ability to regulate biochemical functions to cope with short-term increases in acidity. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

Burdigalian turbid water patch reef environment revealed by larger benthic foraminifera

NASA Astrophysics Data System (ADS)

Novak, V.; Renema, W.; Throughflow-project

2012-04-01

Ancient isolated patch reefs outcropping from siliciclastic sediments are a trademark for the Miocene carbonate deposits occurring in East Kalimantan, Indonesia. They develop in transitional shelf sediments deposited between deltaic and deep marine deposits (Allen and Chambers, 1998). The Batu Putih Limestone (Wilson, 2005) and similar outcrops in adjacent areas have been characterized as shallow water carbonates influenced by high siliciclastic input, showing low relief patch reefs in turbid waters. Larger benthic foraminifera (LBF) are excellent markers for biochronology and paleoenvironmental reconstruction. This study aims to reveal age and paleoenvironment of a shallow water carbonate patch reef developed in mixed depositional system by using LBF and microfacies analysis. The studied section is located near Bontang, East Kalimantan, and is approximately 80 m long and 12 m high. It is placed within Miocene sediments in the central part of the Kutai Basin. Patch reef and capping sediments were logged through eight transects along section and divided into nine different lithological units from which samples were collected. Thin sections and isolated specimens of larger benthic foraminifera were analyzed and recognized to species level (where possible) providing age and environmental information. Microfacies analysis of thin sections included carbonate classification (textural scheme of Dunham, 1962) and assemblage composition of LBF, algae and corals relative abundance. Three environmentally indicative groups of LBF were separated based on test morphology, habitat or living relatives (Hallock and Glenn, 1986). Analysed foraminifera assemblage suggests Burdigalian age (Tf1). With use of microfacies analysis nine successive lithological units were grouped into five facies types. Paleoenvironmental reconstruction of LBF fossil assemblage indicate two cycles of possible deepening recorded in the section. Based on high muddy matrix ratio in analyzed thin-sections we still cannot conclude whether they were deeper water assemblage, or that they occurred in shallower water and influenced by turbid conditions as the result of terrigenous input. According to preliminary analysis and siliciclastic content in the sediments the later one should be more likely. Further work will include additional fossil groups analysis (corals, algae and bryozoans), detailed petrographical analysis and Strontium isotope stratigraphy. Allen, G.P., and Chambers, J.L.C. (1998): Sedimentation in the Modern and Miocene Mahakam Delta. Indonesian Petroleum Association, Jakarta, Indonesia, 236 p. Dunham, R.J. (1962): Classification of carbonate rocks according to their depositional texture. In: Ham, W.E., ed., Classification of Carbonate Rocks: American Association of Petroleum Geologists Memoir, v. 1, p. 108-121. Hallock, P. and Glenn, C.E. (1986): Larger Foraminifera: A tool for paleoenvironmental analysis of Cenozoic carbonate depositional facies. Palaios 1, 55-64. Wilson, M.E.J. (2005): Development of equatorial delta-front patch reefs during the Neogene, Borneo. - Journal of Sedimentary Research, 75(1): 114-133.

Recreational Diver Behavior and Contacts with Benthic Organisms in the Abrolhos National Marine Park, Brazil

NASA Astrophysics Data System (ADS)

Giglio, Vinicius J.; Luiz, Osmar J.; Schiavetti, Alexandre

2016-03-01

In the last two decades, coral reefs have become popular among recreational divers, especially inside marine protected areas. However, the impact caused by divers on benthic organisms may be contributing to the degradation of coral reefs. We analyzed the behavior of 142 scuba divers in the Abrolhos National Marine Park, Brazil. We tested the effect of diver profile, reef type, use of additional equipment, timing, and group size on diver behavior and their contacts with benthic organisms. Eighty-eight percent of divers contacted benthic organism at least once, with an average of eight touches and one damage per dive. No significant differences in contacts were verified among gender, group size, or experience level. Artificial reef received a higher rate of contact than pinnacle and fringe reefs. Specialist photographers and sidemount users had the highest rates, while non-users of additional equipment and mini camera users had the lowest contact rates. The majority of contacts were incidental and the highest rates occurred in the beginning of a dive. Our findings highlight the need of management actions, such as the provision of pre-dive briefing including ecological aspects of corals and beginning dives over sand bottoms or places with low coral abundance. Gathering data on diver behavior provides managers with information that can be used for tourism management.

Recreational Diver Behavior and Contacts with Benthic Organisms in the Abrolhos National Marine Park, Brazil.

PubMed

Giglio, Vinicius J; Luiz, Osmar J; Schiavetti, Alexandre

2016-03-01

In the last two decades, coral reefs have become popular among recreational divers, especially inside marine protected areas. However, the impact caused by divers on benthic organisms may be contributing to the degradation of coral reefs. We analyzed the behavior of 142 scuba divers in the Abrolhos National Marine Park, Brazil. We tested the effect of diver profile, reef type, use of additional equipment, timing, and group size on diver behavior and their contacts with benthic organisms. Eighty-eight percent of divers contacted benthic organism at least once, with an average of eight touches and one damage per dive. No significant differences in contacts were verified among gender, group size, or experience level. Artificial reef received a higher rate of contact than pinnacle and fringe reefs. Specialist photographers and sidemount users had the highest rates, while non-users of additional equipment and mini camera users had the lowest contact rates. The majority of contacts were incidental and the highest rates occurred in the beginning of a dive. Our findings highlight the need of management actions, such as the provision of pre-dive briefing including ecological aspects of corals and beginning dives over sand bottoms or places with low coral abundance. Gathering data on diver behavior provides managers with information that can be used for tourism management.

Do acid volatile sulfides (AVS) influence the accumulation of sediment-bound metals to benthic invertebrates under natural field conditions?

PubMed

De Jonge, Maarten; Dreesen, Freja; De Paepe, Josefina; Blust, Ronny; Bervoets, Lieven

2009-06-15

The present study evaluates the influence of acid volatile sulfides (AVS) on accumulation of sediment-bound metals in benthic invertebrates under natural field conditions. Natural sediments, pore water, surface water, and two species of widespread benthic invertebrates (Chironomus gr. thummi and Tubifex tubifex) were collected from 17 historical polluted Flemish lowland rivers and measured for metal concentrations. Different sediment characteristics were determined (AVS, organic matter, clay content) and multiple regression was used to study their relationship with accumulated metals in the invertebrates. Physical and chemical analysis of the field samples indicated low metal concentrations in the water and pore water, but very high metal concentrations in the sediment and the invertebrates, especially for Pb (5.99 micromol/ g). In general, metal accumulation in chironomids and tubificid worms was most strongly correlated with total metal concentrations in the sediment and sediment metal concentrations normalized for organic matter and clay content. Following the results of the linear regression model, AVS did not turn out to be a significant variable in describing variation in metal accumulation. Our study clearly demonstrates that, in addition to the results gained from experiments under lab conditions, benthic invertebrates can accumulate metals from unspiked field sediments even when there's an excess of AVS.

Isothermal dendritic growth experiment: Science, engineering, and hardware development for USMP space flights

NASA Astrophysics Data System (ADS)

Glicksman, M. E.; Hahn, R. C.; Koss, M. B.; Tirmizi, S. H.; Selleck, M. E.; Velosa, A.; Winsa, E.

The Isothermal Dendritic Growth Experiment (IDGE) has been designed to provide microgravity data on dendritic growth for a critical test of theory. This paper updates our progress on constructing a crystal growth chamber suitable for space flight. The IDGE chamber is constructed from glass and stainless steel and is hermetically sealed by electron beam welds and glass-metal seals. Initial tests of the chambers sample's melting point plateau show that the new chamber design is capable of preserving the 99.9995 pct purity of succinonitrile (SCN). One can initiate dendrite growth in the center of the IDGE chamber by means of thermo-electric coolers and a capillary injector tube (stinger). The new IDGE chamber is ready for fully integrated tests with the prototype IDGE engineering hardware at NASA's Lewis Research Center.

Structuring effects of chemicals from the sea fan Phyllogorgia dilatata on benthic communities.

PubMed

Ribeiro, Felipe V; da Gama, Bernardo A P; Pereira, Renato C

2017-01-01

Despite advances in understanding the ecological functions of secondary metabolites from marine organisms, there has been little focus on the influence of chemically-defended species at the community level. Several compounds have been isolated from the gorgonian octocoral Phyllogorgia dilatata , a conspicuous species that forms dense canopies on rocky reefs of northern Rio de Janeiro State, Brazil. Manipulative experiments were performed to study: (1) the effects of live colonies of P. dilatata (physical presence and chemistry) on recruitment of sympatric benthic organisms; (2) the allelopathic effects of its chemicals on competitors; and (3) chemotactic responses of the non-indigenous brittle star, Ophiothela mirabilis . Early establishment of benthic species was influenced on substrates around live P. dilatata colonies and some effects could be attributed to the gorgonian's secondary metabolites . In addition, the gorgonian chemicals also exerted an allelopathic effect on the sympatric zoanthid Palythoa caribaeorum, and positive chemotaxis upon O. mirabilis . These results indicate multiple ecological roles of a chemically-defended gorgonian on settlement, sympatric competitors, and non-indigenous species.

Exceptional discovery of a shallow-water hydrothermal site in the SW area of Basiluzzo islet (Aeolian archipelago, South Tyrrhenian Sea): An environment to preserve

PubMed Central

Andaloro, Franco; Canese, Simonepietro; Bo, Marzia; Di Bella, Marcella; Italiano, Francesco; Sabatino, Giuseppe; Battaglia, Pietro; Consoli, Pierpaolo; Giordano, Patrizia; Spagnoli, Federico; La Cono, Violetta; Yakimov, Michail M.; Scotti, Gianfranco; Romeo, Teresa

2018-01-01

The geological, biological and geochemical features of a particular field of hydrothermal vents, discovered in the Panarea Volcanic Complex during a research survey carried out in 2015, are described for the first time. The site, located at 70–80 m depth off the South-western coast of the islet of Basiluzzo, was named Smoking Land for the presence of a large number of wide and high active chimneys and was characterized in terms of dissolved benthic fluxes, associated macrofauna and megafauna communities and preliminary mineralogy and geochemistry of chimney structures. On the whole field, a total of 39 chimneys, different in size and shape, were closely observed and described; 14 of them showed emission of low temperature hydrothermal fluids of marine origin characterized by acidified chemical conditions. The CTD and benthic chamber measurements highlighted that the Smoking Land is able to form a sea water bottom layer characterized by variable acidity and high DIC and trace elements concentrations; these characteristics weaken moving away from the chimney mouths. The SEM-EDS analysis of the collected solid samples revealed a chimney structure principally composed by amorphous and low crystalline Fe-oxyhydroxides of hydrothermal origins. The ROV explorations revealed a wide coverage of red algae (Peyssonnelia spp.) colonized by the green algae Flabiella petiolata and by suspension feeders, mainly sponges, but also bryozoans, and tubicolous polychaetes. Although novent-exclusive species were identified, the benthic communities found in association to the chimneys included more taxa than those observed in the surrounding no-vent rocky areas. These first findings evidence a submarine dynamic habitat where geological, chemical and biological processes are intimately connected, making the Smoking Land an important site in terms of marine heritage that should be safeguarded and protected. PMID:29300784

Modeling Benthic Sediment Processes to Predict Water ...

EPA Pesticide Factsheets

The benthic sediment acts as a huge reservoir of particulate and dissolved material (within interstitial water) which can contribute to loading of contaminants and nutrients to the water column. A benthic sediment model is presented in this report to predict spatial and temporal benthic fluxes of nutrients and chemicals in Narragansett Bay. A benthic sediment model is presented in this report to identify benthic flux into the water column in Narragansett Bay. Benthic flux is essential to properly model water quality and ecology in estuarine and coastal systems.

Integrated watershed study: An investigation of the biota in the Emerald Lake system and stream-channel experiments. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cooper, S.D.; Kratz, K.; Holmes, R.W.

1988-05-05

As part of the Integrated Watershed Study in the vicinity of Emerald Lake, Sequoia National Park, investigators conducted baseline monitoring of benthic invertebrates in the inflow streams and the outflow stream. During summer 1986 they carried out a series of acidification experiments in artificial stream channels located in the drainage of the Marble Fork of the Kaweah River. Twelve channels (2.4 m x 20 cm x 20 cm) were stocked with natural substrates, algae and invertebrates. In the treatment channels the pH was reduced to 4.6 and 5.2, using a mixture of nitric and sulfuric acids. Measurements of benthic densities,more » drift rates and algal densities were made before, during and after each acid treatment of 8 hours duration. Diatom populations declined in the acidified channels, while other periphyton species actually increased with the treatment.« less

Modernized Approach for Generating Reproducible Heterogeneity Using Transmitted-Light for Flow Visualization Experiments

NASA Astrophysics Data System (ADS)

Jones, A. A.; Holt, R. M.

2017-12-01

Image capturing in flow experiments has been used for fluid mechanics research since the early 1970s. Interactions of fluid flow between the vadose zone and permanent water table are of great interest because this zone is responsible for all recharge waters, pollutant transport and irrigation efficiency for agriculture. Griffith, et al. (2011) developed an approach where constructed reproducible "geologically realistic" sand configurations are deposited in sandfilled experimental chambers for light-transmitted flow visualization experiments. This method creates reproducible, reverse graded, layered (stratified) thin-slab sand chambers for point source experiments visualizing multiphase flow through porous media. Reverse-graded stratification of sand chambers mimic many naturally occurring sedimentary deposits. Sandfilled chambers use light as nonintrusive tools for measuring water saturation in two-dimensions (2-D). Homogeneous and heterogeneous sand configurations can be produced to visualize the complex physics of the unsaturated zone. The experimental procedure developed by Griffith, et al. (2011) was designed using now outdated and obsolete equipment. We have modernized this approach with new Parker Deadel linear actuator and programed projects/code for multiple configurations. We have also updated the Roper CCD software and image processing software with the latest in industry standards. Modernization of transmitted-light source, robotic equipment, redesigned experimental chambers, and newly developed analytical procedures have greatly reduced time and cost per experiment. We have verified the ability of the new equipment to generate reproducible heterogeneous sand-filled chambers and demonstrated the functionality of the new equipment and procedures by reproducing several gravity-driven fingering experiments conducted by Griffith (2008).

Simple Cloud Chambers Using Gel Ice Packs

ERIC Educational Resources Information Center

Kamata, Masahiro; Kubota, Miki

2012-01-01

Although cloud chambers are highly regarded as teaching aids for radiation education, school teachers have difficulty in using cloud chambers because they have to prepare dry ice or liquid nitrogen before the experiment. We developed a very simple and inexpensive cloud chamber that uses the contents of gel ice packs which can substitute for dry…

Early Triassic alternative ecological states driven by anoxia, hyperthermals, and erosional pulses following the end-Permian mass extinction

NASA Astrophysics Data System (ADS)

Pietsch, C.; Petsios, E.; Bottjer, D. J.

2015-12-01

The end-Permian mass extinction, 252 million years ago, was the most devastating loss of biodiversity in Earth's history. Massive volcanic eruptions of the Siberian Traps and the concurrent burning of coal, carbonate, and evaporite deposits emplaced greenhouse and toxic gasses. Hyperthermal events of the surface ocean, up to 40°C, led to reduced gradient-driven ocean circulation which yielded extensive equatorial oxygen minimum zones. Today, anthropogenic greenhouse gas production is outpacing carbon input modeled for the end-Permian mass extinction, which suggests that modern ecosystems may yet experience a severe biotic crisis. The Early Triassic records the 5 million year aftermath of the end-Permian mass extinction and is often perceived as an interval of delayed recovery. We combined a new, high resolution carbon isotope record, sedimentological analysis, and paleoecological collections from the Italian Werfen Formation to fully integrate paleoenvironmental change with the benthic ecological response. We find that the marine ecosystem experienced additional community restructuring events due to subsequent hyperthermal events and pulses of erosion. The benthic microfauna and macrofauna both contributed to disaster communities that initially rebounded in the earliest Triassic. 'Disaster fauna' including microbialites, microconchids, foraminifera, and "flat clams" took advantage of anoxic conditions in the first ~500,000 years, dominating the benthic fauna. Later, in the re-oxygenated water column, opportunistic disaster groups were supplanted by a more diverse, mollusc-dominated benthic fauna and a complex ichnofauna. An extreme temperature run-up beginning in the Late Dienerian led to an additional hyperthermal event in the Late-Smithian which co-occurred with increased humidity and terrestrial run-off. Massive siliciclastic deposits replaced carbonate deposition which corresponds to the infaunalization of the benthic fauna. The disaster taxa dominated community may represent an alternative ecological state. However, subsequent environmental changes including the return of an oxygenated water column, increased sea surface temperatures, and sedimentary influx led to continued restructuring of the benthic fauna throughout the Early Triassic.

High-energy Physics with Hydrogen Bubble Chambers

DOE R&D Accomplishments Database

Alvarez, L. W.

1958-03-07

Recent experience with liquid hydrogen bubble chambers of 25 and 40 cm dia. in high-energy physics experiments is discussed. Experiments described are: interactions of K{sup -} mesons with protons, interactions of antiprotons with protons, catalysis of nuclear fusion reactions by muons, and production and decay of hyperons from negative pions. (W.D.M.)

Evaluation of Benthic Foraminiferal Mg/Ca and δ18O: Paleoceanographic Application

NASA Astrophysics Data System (ADS)

Fukuda, K.; Frew, R. D.; Fordyce, R. E.

2005-12-01

Using several different analytical approaches on the same samples is crucial for reducing uncertainties in paleoceanographic studies. We examined two different sequences near Oamaru, New Zealand to evaluate a combination of Mg/Ca and δ18O techniques on benthic foraminifera. As a trial, we chose well-preserved material from the Altonian stage (-18 Ma) while as an application, cemented/altered material in Whaingaroan/Runangan stage (-34 Ma) was selected. For the Altonian, Mg/Ca in Notorotalia spinosa and Cibicides spp. were analysed by ICP-OES throughout the fossiliferous sequence and then paleotemperatures were estimated by our modern Mg/Ca calibration curves. The δ18O in N. spinosa and some Cibicides were also measured from the same stations for pairing with Mg/Ca results. Further, to evaluate paleotemperature estimates from the whole tests, spots analyses of Mg/Ca were taken through the successive chambers for the two species using Electron Probe Micro Analysis (EPMA). Paleotemperatures through the successive chambers, which should be related to their life spans, were estimated by the modern calibration curves established from EPMA analysis. Results show that Notorotalia may retain at least an annual record while the signal in Cibicides may retain a part of season. There is distinctive seasonality observed in this period and the δ18Oseawater estimates paired with Mg/Ca in N. spinosa are comparable with published estimates. For the Whaingaroan/Runangan, Mg/Ca in Cibicides parki (ICP) shows relatively low values (cool) through this sequence in agreement with EPMA analysis. However, δ18O-derived temperatures from C. parki imply warmer conditions prevailed. In addition, Mg/Ca and δ18O from Cribrorotalia (closely related to Notorotalia) provide similar temperature estimates to the C. parki isotope results. It appears that Mg/Ca in certain species are susceptible to post-mortem alteration resulting in lower apparent temperatures. Spot analyses in Cribrorotalia show no distinctive seasonality and the δ18Oseawater estimates indicate ice-free conditions. We conclude that pairing Mg/Ca with δ18O allows the estimation of δ18Oseawater, but only if well-preserved and annual recorder specimens are examined. Combination with EPMA analysis may provide insight into seasonal variability.

Selective zircon accumulation in a new benthic foraminifer, Psammophaga zirconia, sp. nov.

NASA Astrophysics Data System (ADS)

Sabbatini, Anna; Negri, Alessandra; Bartolini, Annachiara; Morigi, Caterina; Boudouma, Omar; Dinelli, Enrico; Florindo, Fabio; Galeazzi, Roberta; Holzmann, Maria; Lurcock, Pontus C.; Massaccesi, Luca; Pawlowski, Jan W.; Rocchi, Sergio

2017-04-01

Benthic foraminifera are single-celled eukaryotes that make a protective organic, agglutinated or calcareous test. Some agglutinated, single-chambered taxa, including Psammophaga Arnold, 1982, retain mineral particles in their cytoplasm, but the selective mechanism of accumulation is not clear. Here, we report the ability of a foraminiferal species to select and accumulate zircons and other heavy minerals in their cytoplasm. In particular, the use of Scanning Electron Microscope coupled with an Energy Dispersive X-ray microanalysis system (SEM-EDS) enabled a representative overview of the mineral diversity and showed that the analysed Psammophaga zirconia sp. nov. individuals contained dominantly crystals of zircon (51%), titanium oxides (27%), and ilmenite (11%) along with minor magnetite and other minerals. The studied specimens occur in the shallow central Adriatic Sea where the sediment has a content of zircon below 1% and of other heavy minerals below 4%. For that reason, we suggest that: (i) P. zirconia may be able to chemically select minerals, specifically zircon and rutile; (ii) the chemical mechanism allowing the selection is based on electrostatic interaction, and it could work also for agglutinated foraminifera. In particular, this aptitude for high preferential uptake and differential ingestion or retention of zircon is reported here for the first time, together with the selection of other heavy minerals already described in members of the genus Psammophaga. They are generally counted among early foraminifera, constructing a morphologically simple test with a single chamber. Our molecular phylogenetic study confirms that P. zirconia is a new species, genetically distinctive from other Psammophaga, and occurs in the Adriatic as well as in the Black Sea. Finally, the presence of eukaryotic soft-walled monothalamous microfossils, capable of building a fine aluminosilicate case, in the Precambrian geological record, makes them useful as a valuable record of the early evolution of foraminifera, suggesting that biological agglutination was already present in this group. P. zirconia is a new documented example among foraminifera capable of highly intriguing preferential mineral uptake, showing that this behavior could have emerged very early in their evolution.

Parallel-plate Flow Chamber and Continuous Flow Circuit to Evaluate Endothelial Progenitor Cells under Laminar Flow Shear Stress

PubMed Central

Lane, Whitney O.; Jantzen, Alexandra E.; Carlon, Tim A.; Jamiolkowski, Ryan M.; Grenet, Justin E.; Ley, Melissa M.; Haseltine, Justin M.; Galinat, Lauren J.; Lin, Fu-Hsiung; Allen, Jason D.; Truskey, George A.; Achneck, Hardean E.

2012-01-01

The overall goal of this method is to describe a technique to subject adherent cells to laminar flow conditions and evaluate their response to well quantifiable fluid shear stresses1. Our flow chamber design and flow circuit (Fig. 1) contains a transparent viewing region that enables testing of cell adhesion and imaging of cell morphology immediately before flow (Fig. 11A, B), at various time points during flow (Fig. 11C), and after flow (Fig. 11D). These experiments are illustrated with human umbilical cord blood-derived endothelial progenitor cells (EPCs) and porcine EPCs2,3. This method is also applicable to other adherent cell types, e.g. smooth muscle cells (SMCs) or fibroblasts. The chamber and all parts of the circuit are easily sterilized with steam autoclaving. In contrast to other chambers, e.g. microfluidic chambers, large numbers of cells (> 1 million depending on cell size) can be recovered after the flow experiment under sterile conditions for cell culture or other experiments, e.g. DNA or RNA extraction, or immunohistochemistry (Fig. 11E), or scanning electron microscopy5. The shear stress can be adjusted by varying the flow rate of the perfusate, the fluid viscosity, or the channel height and width. The latter can reduce fluid volume or cell needs while ensuring that one-dimensional flow is maintained. It is not necessary to measure chamber height between experiments, since the chamber height does not depend on the use of gaskets, which greatly increases the ease of multiple experiments. Furthermore, the circuit design easily enables the collection of perfusate samples for analysis and/or quantification of metabolites secreted by cells under fluid shear stress exposure, e.g. nitric oxide (Fig. 12)6. PMID:22297325

Plasma Crystal-3 Plus experiment Chamber Leak Check

NASA Image and Video Library

2010-07-01

ISS024-E-007144 (1 July 2010) --- Russian cosmonaut Alexander Skvortsov, Expedition 24 commander, performs chamber leak checks on the new Plasma Crystal-3 Plus experiment in the Poisk Mini-Research Module 2 (MRM2) of the International Space Station.

Synthesis of benthic flux components in the Patos Lagoon coastal zone, Rio Grande do Sul, Brazil

NASA Astrophysics Data System (ADS)

King, J. N.

2012-12-01

The primary objective of this work is to synthesize components of benthic flux in the Patos Lagoon coastal zone, Rio Grande do Sul, Brazil. Specifically, the component of benthic discharge flux forced by the terrestrial hydraulic gradient is 0.8 m3 d-1; components of benthic discharge and recharge flux associated with the groundwater tidal prism are both 2.1 m3 d-1; components of benthic discharge and recharge flux forced by surface-gravity wave setup are both 6.3 m3 d-1; the component of benthic discharge flux that transports radium-228 is 350 m3 d-1; and components of benthic discharge and recharge flux forced by surface-gravity waves propagating over a porous medium are both 1400 m3 d-1. (All models are normalized per meter shoreline.) Benthic flux is a function of components forced by individual mechanisms and nonlinear interactions that exist between components. Constructive and destructive interference may enhance or diminish the contribution of benthic flux components. It may not be possible to model benthic flux by summing component magnitudes. Geochemical tracer techniques may not accurately model benthic discharge flux or submarine groundwater discharge (SGD). A conceptual model provides a framework on which to quantitatively characterize benthic discharge flux and SGD with a multifaceted approach.

Synthesis of benthic flux components in the Patos Lagooncoastal zone, Rio Grande do Sul, Brazil

USGS Publications Warehouse

King, Jeffrey N.

2012-01-01

The primary objective of this work is to synthesize components of benthic flux in the Patos Lagoon coastal zone, Rio Grande do Sul, Brazil. Specifically, the component of benthic discharge flux forced by the terrestrial hydraulic gradient is 0.8 m3 d-1; components of benthic discharge and recharge flux associated with the groundwater tidal prism are both 2.1 m3 d-1; components of benthic discharge and recharge flux forced by surface-gravity wave setup are both 6.3 m3 d-1; the component of benthic discharge flux that transports radium-228 is 350 m3 d-1; and components of benthic discharge and recharge flux forced by surface-gravity waves propagating over a porous medium are both 1400 m3 d-1. (All models are normalized per meter shoreline.) Benthic flux is a function of components forced by individual mechanisms and nonlinear interactions that exist between components. Constructive and destructive interference may enhance or diminish the contribution of benthic flux components. It may not be possible to model benthic flux by summing component magnitudes. Geochemical tracer techniques may not accurately model benthic discharge flux or submarine groundwater discharge (SGD). A conceptual model provides a framework on which to quantitatively characterize benthic discharge flux and SGD with a multifaceted approach.

Upper Stage Flight Experiment 10K Engine Design and Test Results

NASA Technical Reports Server (NTRS)

Ross, R.; Morgan, D.; Crockett, D.; Martinez, L.; Anderson, W.; McNeal, C.

2000-01-01

A 10,000 lbf thrust chamber was developed for the Upper Stage Flight Experiment (USFE). This thrust chamber uses hydrogen peroxide/JP-8 oxidizer/fuel combination. The thrust chamber comprises an oxidizer dome and manifold, catalyst bed assembly, fuel injector, and chamber/nozzle assembly. Testing of the engine was done at NASA's Stennis Space Center (SSC) to verify its performance and life for future upper stage or Reusable Launch Vehicle applications. Various combinations of silver screen catalyst beds, fuel injectors, and combustion chambers were tested. Results of the tests showed high C* efficiencies (97% - 100%) and vacuum specific impulses of 275 - 298 seconds. With fuel film cooling, heating rates were low enough that the silica/quartz phenolic throat experienced minimal erosion. Mission derived requirements were met, along with a perfect safety record.

A new gun facility dedicated to performing shock physics and terminal ballistics experiments

NASA Astrophysics Data System (ADS)

Zakraysek, Alan J.; Sutherland, Gerrit T.; Sandusky, Harold D.; Strange, David

2000-04-01

A new building has been constructed to house various powder and single-stage and two-stage gas guns at the Naval Surface Warfare Center, Indian Head Division. Guns previously located at the Naval Research Laboratory and the former White Oak Site of the Naval Surface Warfare Center have been relocated here. Most of the guns are mounted on moveable pedestals to allow them to be shot into various chambers. The facility includes a concrete blast chamber, a target chamber/catch tank for flyer plate experiments, and a target chamber outfitted for terminal ballistics measurements. This paper will discuss the capabilities of this new facility.

On a possibility of inelasticity partial coefficient K sub gamma determination in pi C and pi Pb interactions at 10 to the 14th power eV (experiment PAMIR 1)

NASA Technical Reports Server (NTRS)

Borisov, A. S.; Cherdyntseva, K. V.; Guseva, Z. M.; Denisova, V. G.; Dunaevsky, A. M.; Kanevskaya, E. A.; Maximenko, V. M.; Nam, R. A.; Pashkov, S. V.; Puchkov, V. S.

1985-01-01

The investigation of hadron-nuclear interactions in Pamir experiment is carried out by means of X-ray emulsion chambers of two types: carbon (C) and lead (Pb). While comparing the results from the chambers of both types it was found a discrepancy in n sub h and E sub h(1)R values. The observed discrepancy in C and Pb chambers is connected with the difference in values of effective coefficients of energy transfer to the soft component K sub eff for C and Pb chambers.

A facility for long-term Mars simulation experiments: the Mars Environmental Simulation Chamber (MESCH).

PubMed

Jensen, Lars Liengaard; Merrison, Jonathan; Hansen, Aviaja Anna; Mikkelsen, Karina Aarup; Kristoffersen, Tommy; Nørnberg, Per; Lomstein, Bente Aagaard; Finster, Kai

2008-06-01

We describe the design, construction, and pilot operation of a Mars simulation facility comprised of a cryogenic environmental chamber, an atmospheric gas analyzer, and a xenon/mercury discharge source for UV generation. The Mars Environmental Simulation Chamber (MESCH) consists of a double-walled cylindrical chamber. The double wall provides a cooling mantle through which liquid N(2) can be circulated. A load-lock system that consists of a small pressure-exchange chamber, which can be evacuated, allows for the exchange of samples without changing the chamber environment. Fitted within the MESCH is a carousel, which holds up to 10 steel sample tubes. Rotation of the carousel is controlled by an external motor. Each sample in the carousel can be placed at any desired position. Environmental data, such as temperature, pressure, and UV exposure time, are computer logged and used in automated feedback mechanisms, enabling a wide variety of experiments that include time series. Tests of the simulation facility have successfully demonstrated its ability to produce temperature cycles and maintain low temperature (down to -140 degrees C), low atmospheric pressure (5-10 mbar), and a gas composition like that of Mars during long-term experiments.

A Facility for Long-Term Mars Simulation Experiments: The Mars Environmental Simulation Chamber (MESCH)

NASA Astrophysics Data System (ADS)

Jensen, Lars Liengaard; Merrison, Jonathan; Hansen, Aviaja Anna; Mikkelsen, Karina Aarup; Kristoffersen, Tommy; Nørnberg, Per; Lomstein, Bente Aagaard; Finster, Kai

2008-06-01

We describe the design, construction, and pilot operation of a Mars simulation facility comprised of a cryogenic environmental chamber, an atmospheric gas analyzer, and a xenon/mercury discharge source for UV generation. The Mars Environmental Simulation Chamber (MESCH) consists of a double-walled cylindrical chamber. The double wall provides a cooling mantle through which liquid N2 can be circulated. A load-lock system that consists of a small pressure-exchange chamber, which can be evacuated, allows for the exchange of samples without changing the chamber environment. Fitted within the MESCH is a carousel, which holds up to 10 steel sample tubes. Rotation of the carousel is controlled by an external motor. Each sample in the carousel can be placed at any desired position. Environmental data, such as temperature, pressure, and UV exposure time, are computer logged and used in automated feedback mechanisms, enabling a wide variety of experiments that include time series. Tests of the simulation facility have successfully demonstrated its ability to produce temperature cycles and maintain low temperature (down to -140°C), low atmospheric pressure (5 10 mbar), and a gas composition like that of Mars during long-term experiments.

Calibration of cathode strip gains in multiwire drift chambers of the GlueX experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Berdnikov, V. V.; Somov, S. V.; Pentchev, L.

A technique for calibrating cathode strip gains in multiwire drift chambers of the GlueX experiment is described. The accuracy of the technique is estimated based on Monte Carlo generated data with known gain coefficients in the strip signal channels. One of the four detector sections has been calibrated using cosmic rays. Results of drift chamber calibration on the accelerator beam upon inclusion in the GlueX experimental setup are presented.

The Outdoor Atmospheric Simulation Chamber of Orleans-France (HELIOS)

NASA Astrophysics Data System (ADS)

Mellouki, A.; Véronique, D.; Grosselin, B.; Peyroux, F.; Benoit, R.; Ren, Y.; Idir, M.

2016-12-01

Atmospheric simulation chambers are among the most advanced tools for investigating the atmospheric processes to derive physico-chemical parameters which are required for air quality and climate models. Recently, the ICARE-CNRS at Orléans (France) has set up a new large outdoor simulation chamber, HELIOS. HELIOS is one of the most advanced simulation chambers in Europe. It is one of the largest outdoor chambers and is especially suited to processes studies performed under realistic atmospheric conditions. HELIOS is a large hemispherical outdoor simulation chamber (volume of 90 m3) positioned on the top of ICARE-CNRS building at Orléans (47°50'18.39N; 1°56'40.03E). The chamber is made of FEP film ensuring more than 90 % solar light transmission. The chamber is protected against severe meteorological conditions by a moveable "box" which contains a series of Xenon lamps enabling to conduct experiments using artificial light. This special design makes HELIOS a unique platform where experiments can be made using both types of irradiations. HELIOS is dedicated mainly to the investigation of the chemical processes under different conditions (sunlight, artificial light and dark). The platform allows conducting the same type of experiments under both natural and artificial light irradiation. The available large range of complementary and highly sensitive instruments allows investigating the radical chemistry, gas phase processes and aerosol formation under realistic conditions. The characteristics of HELIOS will be presented as well as the first series of experimental results obtained so far.

Depopulation of Caged Layer Hens with a Compressed Air Foam System.

PubMed

Gurung, Shailesh; Hoffman, John; Stringfellow, Kendre; Abi-Ghanem, Daad; Zhao, Dan; Caldwell, David; Lee, Jason; Styles, Darrel; Berghman, Luc; Byrd, James; Farnell, Yuhua; Archer, Gregory; Farnell, Morgan

2018-01-11

During the 2014-2015 US highly pathogenic avian influenza (HPAI) outbreak, 50.4 million commercial layers and turkeys were affected, resulting in economic losses of $3.3 billion. Rapid depopulation of infected poultry is vital to contain and eradicate reportable diseases like HPAI. The hypothesis of the experiment was that a compressed air foam (CAF) system may be used as an alternative to carbon dioxide (CO₂) inhalation for depopulating caged layer hens. The objective of this study was to evaluate corticosterone (CORT) and time to cessation of movement (COM) of hens subjected to CAF, CO₂ inhalation, and negative control (NEG) treatments. In Experiment 1, two independent trials were conducted using young and spent hens. Experiment 1 consisted of five treatments: NEG, CO₂ added to a chamber, a CO₂ pre-charged chamber, CAF in cages, and CAF in a chamber. In Experiment 2, only spent hens were randomly assigned to three treatments: CAF in cages, CO₂ added to a chamber, and aspirated foam. Serum CORT levels of young hens were not significantly different among the CAF in cages, CAF in a chamber, NEG control, and CO₂ inhalation treatments. However, spent hens subjected to the CAF in a chamber had significantly higher CORT levels than birds in the rest of the treatments. Times to COM of spent hens subjected to CAF in cages and aspirated foam were significantly greater than of birds exposed to the CO₂ in a chamber treatment. These data suggest that applying CAF in cages is a viable alternative for layer hen depopulation during a reportable disease outbreak.

Microgravity experiment system utilizing a balloon

NASA Astrophysics Data System (ADS)

Namiki, M.; Ohta, S.; Yamagami, T.; Koma, Y.; Akiyama, H.; Hirosawa, H.; Nishimura, J.

A system for microgravity experiments by using a stratospheric balloon has been planned and developed in ISAS since 1978. A rocket-shaped chamber mounting the experiment apparatus is released from the balloon around 30 km altitude. The microgravity duration is from the release to opening of parachute, controlled by an on-board sequential timer. Test flights were performed in 1980 and in 1981. In September 1983 the first scientific experiment, observing behaviors and brain activities of fishes in the microgravity circumstance, have been successfully carried out. The chamber is specially equipped with movie cameras and subtransmitters, and its release altitude is about 32 km. The microgravity observed inside the chamber is less than 2.9 × 10-3 G during 10 sec. Engineering aspects of the system used in the 1983 experiment are presented.

Effects of Detrital Subsidies on Soft-Sediment Ecosystem Function Are Transient and Source-Dependent.

PubMed

Gladstone-Gallagher, Rebecca V; Lohrer, Andrew M; Lundquist, Carolyn J; Pilditch, Conrad A

2016-01-01

Detrital subsidies from marine macrophytes are prevalent in temperate estuaries, and their role in structuring benthic macrofaunal communities is well documented, but the resulting impact on ecosystem function is not understood. We conducted a field experiment to test the effects of detrital decay on soft-sediment primary production, community metabolism and nutrient regeneration (measures of ecosystem function). Twenty four (2 m2) plots were established on an intertidal sandflat, to which we added 0 or 220 g DW m-2 of detritus from either mangroves (Avicennia marina), seagrass (Zostera muelleri), or kelp (Ecklonia radiata) (n = 6 plots per treatment). Then, after 4, 17 and 46 d we measured ecosystem function, macrofaunal community structure and sediment properties. We hypothesized that (1) detrital decay would stimulate benthic primary production either by supplying nutrients to the benthic macrophytes, or by altering the macrofaunal community; and (2) ecosystem responses would depend on the stage and rate of macrophyte decay (a function of source). Avicennia detritus decayed the slowest with a half-life (t50) of 46 d, while Zostera and Ecklonia had t50 values of 28 and 2.6 d, respectively. However, ecosystem responses were not related to these differences. Instead, we found transient effects (up to 17 d) of Avicennia and Ecklonia detritus on benthic primary production, where initially (4 d) these detrital sources suppressed primary production, but after 17 d, primary production was stimulated in Avicennia plots relative to controls. Other ecosystem function response variables and the macrofaunal community composition were not altered by the addition of detritus, but did vary with time. By sampling ecosystem function temporally, we were able to capture the in situ transient effects of detrital subsidies on important benthic ecosystem functions.

Clam dredging effects and subsequent recovery of benthic communities at different depth ranges.

PubMed

Constantino, R; Gaspar, M B; Tata-Regala, J; Carvalho, S; Cúrdia, J; Drago, T; Taborda, R; Monteiro, C C

2009-03-01

This study aimed to assess the potential effects of clam dredging and the subsequent recovery of the benthic environment. Two experimental areas located at 6 and 18m depth were established in order to analyse whether impacts and recovery of benthic environment are depth-related. Study areas were located within an area closed to dredging and two different plots were established at both depths. One of the plots was subjected to intense clam dredge-fishing, while the other was undisturbed and therefore used as control. Sampling followed a BACI design, with samples for macrobenthic, meiobenthic and sediment particle size analysis being taken by SCUBA divers from both areas before and after fishing stress. For both depths, impacts on the benthic environment were very low resulting in high recovery rates. Nevertheless, at shallower depths communities demonstrated a faster recovery. It was shown that depending on the faunal component used as a bioindicator, different results can be observed. Generally deposit-feeding organisms with scales or chitinous plates and vermiform shape (mainly crustaceans, polychaetes and ophiuroids), without external protection, were the most affected by dredging, while some polychaetes without external protection and with a carnivorous feeding mode seemed to be enhanced by fishing. The low level of perturbations induced by the dredging activities was comparable to the impact of surface waves on the bottom, as experiments were undertaken in wave-dominated environments. The coexistence of storm events during the study period proved to have similar or even more deleterious effects on the benthic environment. It appears that communities from hydrodynamic fishing grounds that are well adapted to natural physical stress are not highly affected by dredging.

Food supply and size class depending variations in phytodetritus intake in the benthic foraminifer Ammonia tepida.

PubMed

Wukovits, Julia; Bukenberger, Patrick; Enge, Annekatrin Julie; Gerg, Maximillian; Wanek, Wolfgang; Watzka, Margarete; Heinz, Petra

2018-04-13

Ammonia tepida is a common and abundant benthic foraminifer in intertidal mudflats. Benthic foraminifera are primary consumers and detritivores and act as key players in sediment nutrient fluxes. In this study, laboratory feeding experiments using isotope-labeled phytodetritus were carried out with A. tepida collected at the German Wadden Sea, to investigate the response of A. tepida to varying food supply. Feeding mode (single pulse, constant feeding; different incubation temperatures) caused strong variations in cytoplasmic carbon and nitrogen cycling, suggesting generalistic adaptations to variations in food availability. To study the influence of intraspecific size to foraminiferal carbon and nitrogen cycling, three size fractions (125-250 µm, 250-355 µm, >355 µm) of A. tepida specimens were separated. Small individuals showed higher weight specific intake for phytodetritus, especially for phytodetrital nitrogen, highlighting that size distribution within foraminiferal populations is relevant to interpret foraminiferal carbon and nitrogen cycling. These results were used to extrapolate the data to natural populations of living A. tepida in sediment cores, demonstrating the impact of high abundances of small individuals on phytodetritus processing and nutrient cycling. It is estimated that at high abundances of individuals in the 125-250 µm size fraction, Ammonia populations can account for more than 11% of phytodetritus processing in intertidal benthic communities. © 2018. Published by The Company of Biologists Ltd.

Multiple stress response of lowland stream benthic macroinvertebrates depends on habitat type.

PubMed

Graeber, Daniel; Jensen, Tinna M; Rasmussen, Jes J; Riis, Tenna; Wiberg-Larsen, Peter; Baattrup-Pedersen, Annette

2017-12-01

Worldwide, lowland stream ecosystems are exposed to multiple anthropogenic stress due to the combination of water scarcity, eutrophication, and fine sedimentation. The understanding of the effects of such multiple stress on stream benthic macroinvertebrates has been growing in recent years. However, the interdependence of multiple stress and stream habitat characteristics has received little attention, although single stressor studies indicate that habitat characteristics may be decisive in shaping the macroinvertebrate response. We conducted an experiment in large outdoor flumes to assess the effects of low flow, fine sedimentation, and nutrient enrichment on the structure of the benthic macroinvertebrate community in riffle and run habitats of lowland streams. For most taxa, we found a negative effect of low flow on macroinvertebrate abundance in the riffle habitat, an effect which was mitigated by fine sedimentation for overall community composition and the dominant shredder species (Gammarus pulex) and by nutrient enrichment for the dominant grazer species (Baetis rhodani). In contrast, fine sediment in combination with low flow rapidly affected macroinvertebrate composition in the run habitat, with decreasing abundances of many species. We conclude that the effects of typical multiple stressor scenarios on lowland stream benthic macroinvertebrates are highly dependent on habitat conditions and that high habitat diversity needs to be given priority by stream managers to maximize the resilience of stream macroinvertebrate communities to multiple stress. Copyright © 2017 Elsevier B.V. All rights reserved.

The trophic biology of the holothurian Molpadia musculus at 3500 m in the Nazaré Canyon (NE Atlantic)

NASA Astrophysics Data System (ADS)

Amaro, T.; Bianchelli, S.; Billett, D. S. M.; Cunha, M. R.; Pusceddu, A.; Danovaro, R.

2010-04-01

Megafaunal organisms play a key role in the deep-sea ecosystem functioning. At 3500 m depth in the Nazaré Canyon, NE Atlantic, very high abundances of the infaunal holothurian Molpadia musculus were found. Sediment samples and holothurians were collected by ROV and experiments were conducted in situ in incubation chambers. The biochemical composition of the sediment (in terms of proteins, carbohydrates and lipids), the holothurians' gut contents and holothurians' faecal material were analysed. In the sediments, proteins were the dominant organic compound, followed by carbohydrates and lipids. In the holothurian gut contents, conversely, protein concentrations were higher than the other compounds and decreased significantly as the material passed through the digestive tract. About 33±1% of the proteins were digested already in the mid gut, with a final digestion rate equal to 67±1%. Carbohydrates and lipids were ingested in smaller amounts and digested with lower efficiencies (23±11% and 50±11%, respectively). As a result, biopolymeric C digestion rate was on average 62±3%. We also calculated that the entire holothurians' population could remove from the sediment about 0.49±0.13 g biopolymeric C and 0.13±0.03 g N m-2 d-1. These results suggest that the M. musculus plays a key role in the benthic tropho-dynamics and biogeochemical processes of the Nazaré Canyon.

Charge division in a small proportional chamber constructed with aluminized mylar tubes

NASA Astrophysics Data System (ADS)

Biino, C.; Mussa, R.; Palestini, S.; Pastrone, N.; Pesando, L.

1988-09-01

A tracking detector composed of aluminized mylar drift tubes is under development for the Fermilab experiment 760. A prototype chamber has been constructed. Results on the longitudinal coordinate determined by charge division are given. Spatial resolution values below 2 mm (rms) were found, corresponding to <1% of the chamber length. Results on chamber ageing are also discussed.

Experimental investigation of a lightweight rocket chamber

NASA Technical Reports Server (NTRS)

Dalgleish, John E; Tischler, Adelbert O

1953-01-01

Experiments have been conducted with a jacketed rocket combustion chamber that was fabricated by hydraulic-forming from sheet metal. Rocket combustion chambers made by this method have been used successfully. Runs with these combustion chambers have been made at over-all heat-transfer rates 1.7 Btu per square inch per second with water cooling and also ammonia as a regenerative coolant.

The Use of Field and Mesocosm Experiments to Quantify Effects of Physical and Chemical Stressors in Mining-Contaminated Streams.

PubMed

Cadmus, Pete; Clements, William H; Williamson, Jacob L; Ranville, James F; Meyer, Joseph S; Gutiérrez Ginés, María Jesús

2016-07-19

Identifying causal relationships between acid mine drainage (AMD) and ecological responses in the field is challenging. In addition to the direct toxicological effects of elevated metals and reduced pH, mining activities influence aquatic organisms indirectly through physical alterations of habitat. The primary goal of this research was to quantify the relative importance of physical (metal-oxide deposition) and chemical (elevated metal concentrations) stressors on benthic macroinvertebrate communities. Mesocosm experiments conducted with natural assemblages of benthic macroinvertebrates established concentration-response relationships between metals and community structure. Field experiments quantified effects of metal-oxide contaminated substrate and showed significant differences in sensitivity among taxa. To predict the recovery of dominant taxa in the field, we integrated our measures of metal tolerance and substrate tolerance with estimates of drift propensity obtained from the literature. Our estimates of recovery were consistent with patterns observed at downstream recovery sites in the NFCC, which were dominated by caddisflies and baetid mayflies. We conclude that mesocosm and small-scale field experiments, particularly those conducted with natural communities, provide an ecologically realistic complement to laboratory toxicity tests. These experiments also control for the confounding variables associated with field-based approaches, thereby supporting causal relationships between AMD stressors and responses.

The drift chamber array at the external target facility in HIRFL-CSR

NASA Astrophysics Data System (ADS)

Sun, Y. Z.; Sun, Z. Y.; Wang, S. T.; Duan, L. M.; Sun, Y.; Yan, D.; Tang, S. W.; Yang, H. R.; Lu, C. G.; Ma, P.; Yu, Y. H.; Zhang, X. H.; Yue, K.; Fang, F.; Su, H.

2018-06-01

A drift chamber array at the External Target Facility in HIRFL-CSR has been constructed for three-dimensional particle tracking in high-energy radioactive ion beam experiments. The design, readout, track reconstruction program and calibration procedures for the detector are described. The drift chamber array was tested in a 311 AMeV 40Ar beam experiment. The detector performance based on the measurements of the beam test is presented. A spatial resolution of 230 μm is achieved.

Japan - USSR joint emulsion chamber experiment at Pamir

NASA Technical Reports Server (NTRS)

1985-01-01

The results are presented for the systematic measurement of cosmic ray showers in the first carbon chamber of Japan-USSR joint experiment at Pamir Plateau. The intensity and the energy distribution of electromagnetic particles, of hadrons and of families are in good agreement with the results of other mountain experiment if the relative error in energy estimation is taken into consideration.

Characterization and testing of a new environmental chamber designed for emission aging studies

NASA Astrophysics Data System (ADS)

Leskinen, A.; Yli-Pirilä, P.; Kuuspalo, K.; Sippula, O.; Jalava, P.; Hirvonen, M.-R.; Jokiniemi, J.; Virtanen, A.; Komppula, M.; Lehtinen, K. E. J.

2014-06-01

A 29 m3 Teflon chamber, designed for aging studies of combustion aerosols, at the University of Eastern Finland is described and characterized. The chamber belongs to a research facility, called Ilmari, where small-scale combustion devices, a dynamometer for vehicle exhaust studies, dilution systems, the chamber, as well as cell and animal exposure devices are side by side under the same roof. The small surface-to-volume ratio of the chamber enables reasonably long experiment times, with particle wall loss rate constants of 0.088, 0.080, 0.045, and 0.040 h-1 for polydisperse, 50, 100, and 200 nm monodisperse aerosols, respectively. The NO2 photolysis rate can be adjusted from zero to 0.62 min-1. The irradiance spectrum is centered at 365 nm and the maximum irradiance, produced by 160 blacklight lamps, is 29.7 W m-2, which corresponds to the UV irradiance in Central Finland at noon on a sunny day in the midsummer. The temperature inside the chamber is uniform and can be kept at 25 ± 1 °C when half of the blacklights are on. The chamber is kept in an overpressure with a moving top frame, which prevents sample dilution and contamination from entering the chamber during an experiment. The functionality of the chamber was tested with oxidation experiments of toluene, resulting in secondary organic aerosol (SOA) yields of 33-44%, depending on the initial conditions, such as the NOx concentration. The highest gaseous oxidation product yields of 14.4-19.5% were detected with ions corresponding to 2-butenedial (m/z 73.029) and 4-oxo-2-pentenal (m/z 99.044). Overall, reasonable yields of SOA and gaseous reaction products, comparable to those obtained in other laboratories, were obtained.

CHAMBER - IONIZATION - EXPERIMENT - GEMINI-TITAN (GT)-6 EQUIPMENT - CAPE

NASA Image and Video Library

1965-12-10

S65-61788 (For release: 11 Dec. 1965) --- Close-up view of equipment which will be used in the D-8 (Radiation in Spacecraft) experiment on the National Aeronautics and Space Administration's Gemini-6 spaceflight. This experiment is designed to make highly accurate measurements of the absorbed dose rate of radiation which penetrates the Gemini spacecraft, and determine the spatial distribution of dose levels inside the spacecraft particularly in the crew area. This is experimentation of the U.S. Air Force Weapons Laboratory, Kirtland AFB, N.M. LOWER LEFT: The second ionization chamber, this one is unshielded. This chamber can be removed from its bracket by the astronaut who will periodically take measurements at various locations in the spacecraft. Nearby is Passive Dosimeter Unit which is one of five small packets each containing a standard pocket ionization chamber, gamma electron sensitive film, glass needles and thermo luminescent dosimeters which are mounted at various locations in the cabin. UPPER LEFT: Photo illustrates how ionization chamber can be removed from bracket for measurements. LOWER RIGHT: Shield of bulb-shaped chamber will be removed (shown in photo) as the spacecraft passes through the South Atlantic anomaly, the area where the radiation belt dips closest to Earth's surface. UPPER RIGHT: Dome-shaped object is shield covering one of two Tissue Equivalent Ionization Chambers (sensors) which will read out continuously the instantaneous rate at which dose is delivered during the flight. This chamber is mounted permanently. The information will be recorded aboard the spacecraft, and will also be received directly by ground stations. This chamber is shielded to simulate the amount of radiation the crew members are receiving beneath their skin. Photo credit: NASA or National Aeronautics and Space Administration

DETECTING INTERACTIONS BETWEEN ELLIPTIO WACCAMAWENSIS AND LEPTODEA OCHRACEA: THE INFLUENCE OF EXPERIMENTAL SCALE.

EPA Science Inventory

Manipulative field experiments are used in ecology to study biotic interactions in populations and communities. In benthic suspension-feeding organisms, these interactions can occur over multiple spatial scales, but this has rarely received experimental attention. A field experim...

Initial Back-to-Back Fission Chamber Testing in ATRC

DOE Office of Scientific and Technical Information (OSTI.GOV)

Benjamin Chase; Troy Unruh; Joy Rempe

2014-06-01

Development and testing of in-pile, real-time neutron sensors for use in Materials Test Reactor experiments is an ongoing project at Idaho National Laboratory. The Advanced Test Reactor National Scientific User Facility has sponsored a series of projects to evaluate neutron detector options in the Advanced Test Reactor Critical Facility (ATRC). Special hardware was designed and fabricated to enable testing of the detectors in the ATRC. Initial testing of Self-Powered Neutron Detectors and miniature fission chambers produced promising results. Follow-on testing required more experiment hardware to be developed. The follow-on testing used a Back-to-Back fission chamber with the intent to providemore » calibration data, and a means of measuring spectral indices. As indicated within this document, this is the first time in decades that BTB fission chambers have been used in INL facilities. Results from these fission chamber measurements provide a baseline reference for future measurements with Back-to-Back fission chambers.« less

Sounding experiments of high pressure gas discharge

DOE Office of Scientific and Technical Information (OSTI.GOV)

Biele, Joachim K.

A high pressure discharge experiment (200 MPa, 5{center_dot}10{sup 21} molecules/cm{sup 3}, 3000 K) has been set up to study electrically induced shock waves. The apparatus consists of the combustion chamber (4.2 cm{sup 3}) to produce high pressure gas by burning solid propellant grains to fill the electrical pump chamber (2.5 cm{sup 3}) containing an insulated coaxial electrode. Electrical pump energy up to 7.8 kJ at 10 kV, which is roughly three times of the gas energy in the pump chamber, was delivered by a capacitor bank. From the current-voltage relationship the discharge develops at rapidly decreasing voltage. Pressure at themore » combustion chamber indicating significant underpressure as well as overpressure peaks is followed by an increase of static pressure level. These data are not yet completely understood. However, Lorentz forces are believed to generate pinching with subsequent pinch heating, resulting in fast pressure variations to be propagated as rarefaction and shock waves, respectively. Utilizing pure axisymmetric electrode initiation rather than often used exploding wire technology in the pump chamber, repeatable experiments were achieved.« less

Long term performance studies of large oil-free bakelite resistive plate chamber

NASA Astrophysics Data System (ADS)

Ganai, R.; Roy, A.; Shiroya, M. K.; Agarwal, K.; Ahammed, Z.; Choudhury, S.; Chattopadhyay, S.

2016-09-01

Several high energy physics and neutrino physics experiments worldwide require large-size RPCs to cover wide acceptances. The muon tracking systems in the Iron calorimeter (ICAL) experiment in the India based Neutrino Observatory (INO), India and the near detector in Deep Underground Neutrino Experiment (DUNE) at Fermilab are two such examples. A single gap bakelite RPC of dimension 240 cm × 120 cm, with gas gap of 0.2 cm, has been built and tested at Variable Energy Cyclotron Centre, Kolkata, using indigenous materials procured from the local market. No additional lubricant, like oil has been used on the electrode surfaces for smoothening. The chamber is in operation for > 365 days. We have tested the chamber for its long term operation. The leakage current, bulk resistivity, efficiency, noise rate and time resolution of the chamber have been found to be quite stable during the testing peroid. It has shown an efficiency > 95% with an average time resolution of ~ 0.83 ns at the point of measurement at ~ 8700 V throughout the testing period. Details of the long term performance of the chamber have been discussed.

Nitrogen fixation dynamics of two diazotrophic communities in Mono Lake, California

USGS Publications Warehouse

Oremland, R.S.

1990-01-01

Two types of diazotrophic microbial communities were found in the littoral zone of alkaline hypersaline Mono Lake, California. One consisted of anaerobic bacteria inhabiting the flocculent surface layers of sediments. Nitrogen fixation (acetylene reduction) by flocculent surface layers occurred under anaerobic conditions, was not stimulated by light or by additions of organic substrates, and was inhibited by O2, nitrate, and ammonia. The second community consisted of a ball-shaped association of a filamentous chlorophyte (Ctenocladus circinnatus) with diazotrophic, nonheterocystous cyanobacteria, as well as anaerobic bacteria (Ctenocladus balls). Nitrogen fixation by Ctenocladus balls was usually, but not always, stimulated by light. Rates of anaerobic dark fixation equaled those in the light under air. Fixation in the light was stimulated by 3-(3,4-dichlorophenyl)-1,1-dimethylurea and by propanil [N-(3,4-dichlorophenyl)propanamide]. 3-(3,4-Dichlorophenyl)-1,1-dimethyl urea-elicited nitrogenase activity was inhibited by ammonia (96%) and nitrate (65%). Fixation was greatest when Ctenocladus balls were incubated anaerobically in the light with sulfide. Dark anaerobic fixation was not stimulated by organic substrates in short-term (4-h) incubations, but was in long-term (67-h) ones. Areal estimates of benthic N2 fixation were measured seasonally, using chambers. Highest rates (~29.3 ??mol of C2H4 m-2 h-1) occurred under normal diel regimens of light and dark. These estimates indicate that benthic N2 fixation has the potential to be a significant nitrogen source in Mono Lake.

Modelling temporal and spatial dynamics of benthic fauna in North-West-European shelf seas

NASA Astrophysics Data System (ADS)

Lessin, Gennadi; Bruggeman, Jorn; Artioli, Yuri; Butenschön, Momme; Blackford, Jerry

2017-04-01

Benthic zones of shallow shelf seas receive high amounts of organic material. Physical processes such as resuspension, as well as complex transformations mediated by diverse faunal and microbial communities, define fate of this material, which can be returned to the water column, reworked within sediments or ultimately buried. In recent years, numerical models of various complexity and serving different goals have been developed and applied in order to better understand and predict dynamics of benthic processes. ERSEM includes explicit parameterisations of several groups of benthic biota, which makes it particularly applicable for studies of benthic biodiversity, biological interactions within sediments and benthic-pelagic coupling. To assess model skill in reproducing temporal (inter-annual and seasonal) dynamics of major benthic macrofaunal groups, 1D model simulation results were compared with data from the Western Channel Observatory (WCO) benthic survey. The benthic model was forced with organic matter deposition rates inferred from observed phytoplankton abundance and model parameters were subsequently recalibrated. Based on model results and WCO data comparison, deposit-feeders exert clear seasonal variability, while for suspension-feeders inter-annual variability is more pronounced. Spatial distribution of benthic fauna was investigated using results of a full-scale NEMO-ERSEM hindcast simulation of the North-West European Shelf Seas area, covering the period of 1981-2014. Results suggest close relationship between spatial distribution of biomass of benthic faunal functional groups in relation to bathymetry, hydrodynamic conditions and organic matter supply. Our work highlights that it is feasible to construct, implement and validate models that explicitly include functional groups of benthic macrofauna. Moreover, the modelling approach delivers detailed information on benthic biogeochemistry and food-web at spatial and temporal scales that are unavailable through other sources but highly relevant to marine management, planning and policy.

Assessing the Response of Nematode Communities to Climate Change-Driven Warming: A Microcosm Experiment.

PubMed

Gingold, Ruth; Moens, Tom; Rocha-Olivares, Axayácatl

2013-01-01

Biodiversity has diminished over the past decades with climate change being among the main responsible factors. One consequence of climate change is the increase in sea surface temperature, which, together with long exposure periods in intertidal areas, may exceed the tolerance level of benthic organisms. Benthic communities may suffer structural changes due to the loss of species or functional groups, putting ecological services at risk. In sandy beaches, free-living marine nematodes usually are the most abundant and diverse group of intertidal meiofauna, playing an important role in the benthic food web. While apparently many functionally similar nematode species co-exist temporally and spatially, experimental results on selected bacterivore species suggest no functional overlap, but rather an idiosyncratic contribution to ecosystem functioning. However, we hypothesize that functional redundancy is more likely to observe when taking into account the entire diversity of natural assemblages. We conducted a microcosm experiment with two natural communities to assess their stress response to elevated temperature. The two communities differed in diversity (high [HD] vs. low [LD]) and environmental origin (harsh vs. moderate conditions). We assessed their stress resistance to the experimental treatment in terms of species and diversity changes, and their function in terms of abundance, biomass, and trophic diversity. According to the Insurance Hypothesis, we hypothesized that the HD community would cope better with the stressful treatment due to species functional overlap, whereas the LD community functioning would benefit from species better adapted to harsh conditions. Our results indicate no evidence of functional redundancy in the studied nematofaunal communities. The species loss was more prominent and size specific in the HD; large predators and omnivores were lost, which may have important consequences for the benthic food web. Yet, we found evidence for alternative diversity-ecosystem functioning relationships, such as the Rivets and the Idiosyncrasy Model.

Sedimentary sources of old high molecular weight dissolved organic carbon from the ocean margin benthic nepheloid layer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guo, L. Santschi, P.H.

2000-02-01

Average {sup 14}C ages of dissolved organic carbon (DOC) in the ocean are 3--6,000 years, and are influenced by old DOC from continental margins. However, sources of DOC from terrestrial, autochthonous, and sedimentary organic carbon seem to be too young to be responsible for the old DOC observed in the ocean. Since colloidal organic carbon (COC, i.e., high molecular weight DOC), which is chemically very similar to that of bulk DOC, can be effectively isolated from seawater using cross-flow ultrafiltration, it can hold clues to sources and pathways of DOC turnover in the ocean. Radiocarbon measurements on COC in themore » water column and benthic nepheloid layer (BNL) from two continental margin areas (the Middle Atlantic Bight and the Gulf of Mexico) and controlled laboratory experiments were carried out to study sources of old DOC in the ocean margin areas. Vertical distributions of suspended particulate matter (SPM), particulate organic carbon (POC), nitrogen (PON), and DOC in the water column and bottom waters near the sediment-water interface all demonstrate a well developed benthic nepheloid layer in both ocean margin areas. COC from the BNL was much older than COC from the overlying water column. These results, together with strong concentration gradients of SPM, POC, PON, and DOC, suggest a sedimentary source for organic carbon species and possibly for old COC as well in BNL waters. This is confirmed by the results from controlled laboratory experiments. The heterogeneity of {Delta}{sup 14}C signatures in bulk SOC thus points to a preferential release of old organic components from sediment resuspension, which can be the transport mechanism of the old benthic COC observed in ocean margin areas. Old COC from continental margin nepheloid layers may thus be a potential source of old DOC to the deep ocean.« less

Will the Displacement of Zebra Mussels by Quagga Mussels Increase Water Clarity in Shallow Lakes during Summer? Results from a Mesocosm Experiment.

PubMed

Mei, Xueying; Zhang, Xiufeng; Kassam, Sinan-Saleh; Rudstam, Lars G

2016-01-01

Zebra mussels (Dreissena polymorpha) are known to increase water clarity and affect ecosystem processes in invaded lakes. During the last decade, the conspecific quagga mussels (D. rostriformis bugensis) have displaced zebra mussels in many ecosystems including shallow lakes such as Oneida Lake, New York. In this study, an eight-week mesocosm experiment was conducted to test the hypothesis that the displacement of zebra mussels by quagga mussels leads to further decreases in phytoplankton and increases in water clarity resulting in increases in benthic algae. We found that the presence of zebra mussels alone (ZM), quagga mussels alone (QM), or an equal number of both species (ZQ) reduced total phosphorus (TP) and phytoplankton Chl a. Total suspended solids (TSS) was reduced in ZM and ZQ treatments. Light intensity at the sediment surface was higher in all three mussel treatments than in the no-mussel controls but there was no difference among the mussel treatments. There was no increase in benthic algae biomass in the mussel treatments compared with the no-mussel controls. Importantly, there was no significant difference in nutrient (TP, soluble reactive phosphorus and NO3-) levels, TSS, phytoplankton Chl a, benthic algal Chl a, or light intensity on the sediment surface between ZM, QM and ZQ treatments. These results confirm the strong effect of both mussel species on water clarity and indicate that the displacement of zebra mussel by an equivalent biomass of quagga mussel is not likely to lead to further increases in water clarity, at least for the limnological conditions, including summer temperature, tested in this experiment.

Will the Displacement of Zebra Mussels by Quagga Mussels Increase Water Clarity in Shallow Lakes during Summer? Results from a Mesocosm Experiment

PubMed Central

Kassam, Sinan-Saleh; Rudstam, Lars G.

2016-01-01

Zebra mussels (Dreissena polymorpha) are known to increase water clarity and affect ecosystem processes in invaded lakes. During the last decade, the conspecific quagga mussels (D. rostriformis bugensis) have displaced zebra mussels in many ecosystems including shallow lakes such as Oneida Lake, New York. In this study, an eight-week mesocosm experiment was conducted to test the hypothesis that the displacement of zebra mussels by quagga mussels leads to further decreases in phytoplankton and increases in water clarity resulting in increases in benthic algae. We found that the presence of zebra mussels alone (ZM), quagga mussels alone (QM), or an equal number of both species (ZQ) reduced total phosphorus (TP) and phytoplankton Chl a. Total suspended solids (TSS) was reduced in ZM and ZQ treatments. Light intensity at the sediment surface was higher in all three mussel treatments than in the no-mussel controls but there was no difference among the mussel treatments. There was no increase in benthic algae biomass in the mussel treatments compared with the no-mussel controls. Importantly, there was no significant difference in nutrient (TP, soluble reactive phosphorus and NO3-) levels, TSS, phytoplankton Chl a, benthic algal Chl a, or light intensity on the sediment surface between ZM, QM and ZQ treatments. These results confirm the strong effect of both mussel species on water clarity and indicate that the displacement of zebra mussel by an equivalent biomass of quagga mussel is not likely to lead to further increases in water clarity, at least for the limnological conditions, including summer temperature, tested in this experiment. PMID:28005940

Documentation of Plant Growth in an EPO-Kit C Chamber taken during Expedition 15

NASA Image and Video Library

2007-08-20

ISS015-E-23475 (20 Aug. 2007) --- Close-up view of a plant growth experiment in an Education Payload Operations experiment collapsible growth chamber (labeled "Lettuce") photographed in the U.S. Laboratory or Destiny module aboard the International Space Station during Expedition 15.

Development of a Methodology for Conducting Hall Thruster EMI Tests in Metal Vacuum Chambers of Arbitrary Shape and Size

NASA Technical Reports Server (NTRS)

Gallimore, Alec D.

2000-01-01

While the closed-drift Hall thruster (CDT) offers significant improvement in performance over conventional chemical rockets and other advanced propulsion systems such as the arcjet, its potential impact on spacecraft communication signals must be carefully assessed before widespread use of this device can take place. To this end, many of the potentially unique issues that are associated with these thrusters center on its plume plasma characteristics and the its interaction with electromagnetic waves. Although a great deal of experiments have been made in characterizing the electromagnetic interference (EMI) potential of these thrusters, the interpretation of the resulting data is difficult because most of these measurements have been made in vacuum chambers with metal walls which reflect radio waves emanating from the thruster. This project developed a means of assessing the impact of metal vacuum chambers of arbitrary size or shape on EMI experiments, thereby allowing for test results to be interpreted properly. Chamber calibration techniques were developed and initially tested at RIAME using their vacuum chamber. Calibration experiments were to have been made at Tank 5 of NASA GRC and the 6 m by 9 m vacuum chamber at the University of Michigan to test the new procedure, however the subcontract to RIAME was cancelled by NASA memorandum on Feb. 26. 1999.

Chemical and physical transformations of organic aerosol from the photo-oxidation of open biomass burning emissions in an environmental chamber

Treesearch

C. J. Hennigan; M. A. Miracolo; G. J. Engelhart; A. A. May; A. A. Presto; T. Lee; A. P. Sullivan; G. R. McMeeking; H. Coe; C. E. Wold; W.-M. Hao; J. B. Gilman; W. C. Kuster; J. de Gouw; B. A. Schichtel; J. L. Collett; S. M. Kreidenweis; A. L. Robinson

2011-01-01

Smog chamber experiments were conducted to investigate the chemical and physical transformations of organic aerosol (OA) during photo-oxidation of open biomass burning emissions. The experiments were carried out at the US Forest Service Fire Science Laboratory as part of the third Fire Lab at Missoula Experiment (FLAME III). We investigated emissions from 12 different...

Promoted-Combustion Chamber with Induction Heating Coil

NASA Technical Reports Server (NTRS)

Richardson, Erin; Hagood, Richard; Lowery, Freida; Herald, Stephen

2006-01-01

An improved promoted-combustion system has been developed for studying the effects of elevated temperatures on the flammability of metals in pure oxygen. In prior promoted-combustion chambers, initial temperatures of metal specimens in experiments have been limited to the temperatures of gas supplies, usually near room temperature. Although limited elevated temperature promoted-combustion chambers have been developed using water-cooled induction coils for preheating specimens, these designs have been limited to low-pressure operation due to the hollow induction coil. In contrast, the improved promoted-combustion chamber can sustain a pressure up to 10 kpsi (69 MPa) and, through utilization of a solid induction coil, is capable of preheating a metal specimen up to its melting point [potentially in excess of 2,000 F (approximately equal to 1,100 C)]. Hence, the improved promoted combustion chamber makes a greater range of physical conditions and material properties accessible for experimentation. The chamber consists of a vertical cylindrical housing with an inner diameter of 8 in. (20.32 cm) and an inner height of 20.4 in. (51.81 cm). A threaded, sealing cover at one end of the housing can be unscrewed to gain access for installing a specimen. Inlet and outlet ports for gases are provided. Six openings arranged in a helical pattern in the chamber wall contain sealed sapphire windows for viewing an experiment in progress. The base of the chamber contains pressure-sealed electrical connectors for supplying power to the induction coil. The connectors feature a unique design that prevents induction heating of the housing and the pressure sealing surfaces; this is important because if such spurious induction heating were allowed to occur, chamber pressure could be lost. The induction coil is 10 in. (25.4 cm) long and is fitted with a specimen holder at its upper end. At its lower end, the induction coil is mounted on a ceramic base, which affords thermal insulation to prevent heating of the base of the chamber during use. A sapphire cylinder protects the coil against slag generated during an experiment. The induction coil is energized by a 6-kW water-cooled power supply operating at a frequency of 400 kHz. The induction coil is part of a parallel-tuned circuit, the tuning of which is used to adjust the coupling of power to the specimen. The chamber is mounted on a test stand along with pumps, valves, and plumbing for transferring pressurized gas into and out of the chamber. In addition to multiple video cameras aimed through the windows encircling the chamber, the chamber is instrumented with gauges for monitoring the progress of an experiment. One of the gauges is a dual-frequency infrared temperature transducer aimed at the specimen through one window. Chamber operation is achieved via a console that contains a computer running apparatus-specific software, a video recorder, and real-time video monitors. For safety, a blast wall separates the console from the test stand.

Adrenal hormones interact with sympathetic innervation to modulate growth of embryonic heart in oculo.

PubMed

Tucker, D C; Torres, A

1992-02-01

To allow experimental manipulation of adrenal hormone and autonomic influences on developing myocardium without alteration of hemodynamic load, embryonic rat heart was cultured in the anterior eye chamber of an adult rat. Sympathetic innervation of embryonic day 12 heart grafts was manipulated by surgical sympathectomy of one eye chamber in each host rat. Adrenal hormone exposure was manipulated by host adrenal medullectomy (MEDX) in experiment 1 and by host adrenalectomy (ADX) in experiment 2. In experiment 1, whole heart grafts were larger in MEDX than in sham-operated hosts by 8 wk in oculo (6.14 +/- 0.71 vs. 5.09 +/- 0.69 mm2 with innervation intact and 7.97 +/- 2.07 vs. 3.09 +/- 0.63 mm2 with sympathetic innervation prevented). In experiment 2, host ADX increased growth of embryonic day 12 ventricles grafted into sympathectomized eye chambers (0.69 +/- 0.10 vs. 0.44 +/- 0.04 mm2) but did not affect growth of grafts in intact eye chambers (0.85 +/- 0.09 vs. 1.05 +/- 0.15 mm2). Corticosterone replacement (4 mg/day) entirely reversed the effect of host ADX on graft growth (superior cervical ganglionectomy, 0.47 +/- 0.03 mm2; intact eye chambers, 0.90 +/- 0.91 mm2). Beating rate of grafts was not affected by adrenal hormone manipulations. These experiments indicate that the compromised growth of embryonic heart grafts placed in sympathectomized eye chambers requires exposure to adult levels of glucocorticoids during the early days after grafting. These results suggest that interactions between neural and hormonal stimulation influence cardiac growth in the in oculo culture system and during normal development.

Experience gained from using water and steam for bringing the operation of aircraft- and marine-derivative gas-turbine engines in compliance with environmental standards

NASA Astrophysics Data System (ADS)

Datsenko, V. V.; Zeigarnik, Yu. A.; Kosoi, A. S.

2014-04-01

Practical experience gained from using water and steam admission into the combustion chambers of aircraft- and marine-derivative gas turbines for bringing their operation in compliance with the requirements of environmental standards is described. The design and schematic modifications of combustion chambers and fuel system through which this goal is achieved are considered. The results obtained from industrial and rig tests of combustion chambers fitted with water or steam admission systems are presented.

Automation of Vapor-Diffusion Growth of Protein Crystals

NASA Technical Reports Server (NTRS)

Hamrick, David T.; Bray, Terry L.

2005-01-01

Some improvements have been made in a system of laboratory equipment developed previously for studying the crystallization of proteins from solution by use of dynamically controlled flows of dry gas. The improvements involve mainly (1) automation of dispensing of liquids for starting experiments, (2) automatic control of drying of protein solutions during the experiments, and (3) provision for automated acquisition of video images for monitoring experiments in progress and for post-experiment analysis. The automation of dispensing of liquids was effected by adding an automated liquid-handling robot that can aspirate source solutions and dispense them in either a hanging-drop or a sitting-drop configuration, whichever is specified, in each of 48 experiment chambers. A video camera of approximately the size and shape of a lipstick dispenser was added to a mobile stage that is part of the robot, in order to enable automated acquisition of images in each experiment chamber. The experiment chambers were redesigned to enable the use of sitting drops, enable backlighting of each specimen, and facilitate automation.

Performances of RPCs in the BaBar experiment

NASA Astrophysics Data System (ADS)

Anulli, F.; Baldini, R.; Band, H.; Bionta, R.; Brau, J.; Brigljevic, V.; Buzzo, A.; Calcaterra, A.; Carpinelli, M.; Cartaro, T.; Cavallo, N.; Crosetti, G.; De Nardo, G.; De Sangro, R.; Eichenbaum, A.; Falciai, D.; Fabozzi, F.; Ferroni, F.; Finocchiaro, G.; Forti, F.; Frey, R.; Johnson, J.; Gatto, C.; Grauges-Pous, E.; Iwasaki, M.; Lange, D.; Lista, L.; Lo Vetere, M.; Lu, C.; Neal, H.; Neri, N.; Macri, M.; Messener, B.; Monge, M. R.; Moore, T.; Morganti, S.; Palano, A.; Paoloni, E.; Paolucci, P.; Passaggio, S.; Pastore, F.; Patrignani, C.; Patteri, P.; Peruzzi, I.; Piccolo, D.; Piccolo, M.; Piredda, G.; Pompili, A.; Robutti, E.; Roodman, A.; Santroni, A.; Sciacca, C.; Sinev, N.; Soha, A.; Storm, D.; Tosi, S.; Va'vra, J.; Xie, Y.; Wright, D.; Wisniewski, W.

2003-12-01

The BaBar experiment uses a big system based on RPC detectors to discriminate muons from pions and to identify neutral hadrons. About 2000 m2 of RPC chambers have been working at SLAC since the end of 1998. We report on the performances of the RPC chambers focusing on new problems discovered in the RPC behaviour. These problems started very soon after the installation of the chambers on the detector when the high-ambient temperature triggered an increase of dark currents inside the chambers and a reduction of the efficiency. Careful analysis of the BaBar data and dedicated R&D efforts in the laboratory have helped to identify the main source of the trouble in the linseed oil varnish on the bakelite electrodes.

Multi-scale measurements and modeling of denitrification in streams with varying flow and nitrate concentration in the upper Mississippi River basin, USA

USGS Publications Warehouse

Böhlke, John Karl; Antweiler, Ronald C.; Harvey, Judson W.; Laursen, Andrew E.; Smith, Lesley K.; Smith, Richard L.; Voytek, Mary A.

2009-01-01

Denitrification is an important net sink for NO3− in streams, but direct measurements are limited and in situ controlling factors are not well known. We measured denitrification at multiple scales over a range of flow conditions and NO3− concentrations in streams draining agricultural land in the upper Mississippi River basin. Comparisons of reach-scale measurements (in-stream mass transport and tracer tests) with local-scale in situ measurements (pore-water profiles, benthic chambers) and laboratory data (sediment core microcosms) gave evidence for heterogeneity in factors affecting benthic denitrification both temporally (e.g., seasonal variation in NO3− concentrations and loads, flood-related disruption and re-growth of benthic communities and organic deposits) and spatially (e.g., local stream morphology and sediment characteristics). When expressed as vertical denitrification flux per unit area of streambed (Udenit, in μmol N m−2 h−1), results of different methods for a given set of conditions commonly were in agreement within a factor of 2–3. At approximately constant temperature (~20 ± 4°C) and with minimal benthic disturbance, our aggregated data indicated an overall positive relation between Udenit (~0–4,000 μmol N m−2 h−1) and stream NO3−concentration (~20–1,100 μmol L−1) representing seasonal variation from spring high flow (high NO3−) to late summer low flow (low NO3−). The temporal dependence of Udenit on NO3−was less than first-order and could be described about equally well with power-law or saturation equations (e.g., for the unweighted dataset, Udenit ≈26 * [NO3−]0.44 or Udenit≈640 * [NO3−]/[180 + NO3−]; for a partially weighted dataset, Udenit ≈14 * [NO3−]0.54 or Udenit ≈700 * [NO3−]/[320 + NO3−]). Similar parameters were derived from a recent spatial comparison of stream denitrification extending to lower NO3− concentrations (LINX2), and from the combined dataset from both studies over 3 orders of magnitude in NO3−concentration. Hypothetical models based on our results illustrate: (1) Udenit was inversely related to denitrification rate constant (k1denit, in day−1) and vertical transfer velocity (vf,denit, in m day−1) at seasonal and possibly event time scales; (2) although k1denit was relatively large at low flow (low NO3−), its impact on annual loads was relatively small because higher concentrations and loads at high flow were not fully compensated by increases in Udenit; and (3) although NO3− assimilation and denitrification were linked through production of organic reactants, rates of NO3− loss by these processes may have been partially decoupled by changes in flow and sediment transport. Whereas k1denit and vf,denit are linked implicitly with stream depth, NO3− concentration, and(or) NO3− load, estimates of Udenit may be related more directly to field factors (including NO3− concentration) affecting denitrification rates in benthic sediments. Regional regressions and simulations of benthic denitrification in stream networks might be improved by including a non-linear relation between Udenit and stream NO3−concentration and accounting for temporal variation.

Internal nutrient sources and nutrient distributions in Alviso Pond A3W, California

USGS Publications Warehouse

Topping, Brent R.; Kuwabara, James S.; Garrett, Krista K.; Takekawa, John Y.; Parcheso, Francis; Piotter, Sara; Clearwater, Iris; Shellenbarger, Gregory

2013-01-01

Within the Alviso Salt Pond complex, California, currently undergoing avian-habitat restoration, pore-water profilers (U.S. Patent 8,051,727 B1) were deployed in triplicate at two contrasting sites in Pond A3W (“Inlet”, near the inflow, and “Deep”, near the middle of the pond; figs. 1 and 2; table 1, note that tables in this report are provided online only as a .xlsx workbook at http://pubs.usgs.gov/of/2013/1128/). Deployments were conducted in 2010 and 2012 during the summer algal-growth season. Specifically, three deployments, each about 7 weeks apart, were undertaken each summer. This study provides the first measurements of the diffusive flux of nutrients across the interface between the pond bed and water column (that is, benthic nutrient flux). These nutrient fluxes are crucial to pond restoration efforts because they typically represent a major (if not the greatest) source of nutrients to the water column in both ponds and other lentic systems. For soluble reactive phosphorus (SRP, the most biologically available form in solution), benthic flux was positive both years (that is, out of the sediment into the water column; table 2), with the exception of the August 2010 deployment, which exhibited nearly negligible but negative flux. Overall, the average SRP flux was significantly greater at Deep (23.9 ± 8.6 micromoles per square meter per hour (µmol-m-2-h-1); all errors shown reflect the 95-percent confidence interval) than Inlet (12.6 ± 4.9 µmol-m-2-h-1). There was much greater temporal variability in SRP flux in the pond than reported for the lower estuary (Topping and others, 2001). For dissolved ammonia, benthic flux was consistently positive on all six sampling trips, and similar to SRP, the fluxes at Deep (258 ± 49 µmol-m-2-h-1) were consistently greater than those at Inlet (28 ± 11 µmol-m-2-h-1). Dissolved ammonia fluxes reported for South San Francisco Bay by Topping and others (2001) fall in between these values. Once again, greater variability for benthic fluxes determined in the pond was observed relative to adjacent South San Francisco Bay. With the near absence of any measurable concentration gradient, dissolved-nitrate fluxes were consistently negligible in the pond. Silica fluxes are often used to represent sediment diagenetic processes that biogeochemically cycle silica (an important algal macronutrient) between biogenic and inorganic phases (Fanning and Pilson, 1974; Emerson and others, 1984). For South San Francisco Bay, those values are consistently positive from core-incubation experiments. In Pond A3W, dissolved-silica fluxes averaged 49 ± 25 µmol-m-2-h-1 at Inlet and were much higher at Deep (482 ± 370 µmol-m-2-h-1), similar to the spatially variability observed for SRP and dissolved ammonia. An elevated silica flux can stimulate diatom production and subsequent eutrophication effects. Variability in these silica fluxes is consistent with season patterns in pond primary productivity. On the basis of comparisons of dissolved-oxygen flux measurements by profilers and core incubations, it appears that diffusive flux estimates for the sediment in this pond, as one might expected in such benthically productive environments, result in a significant underestimation of true sediment oxygen demand. Therefore, a core incubation experiment was conducted to better quantify the demand. To complement these benthic-flux studies, a diurnal study of nutrient advective flux into and out of the pond was measured during neap and spring tides to provide comparative estimates for allochthonous solute transport (Garret, 2012). Using the two different tides as the probable upper and lower boundaries, we can estimate a range of probable values throughout the year. After converting this advective flux into kg/yr, we can compare it directly to benthic flux estimates for the pond extrapolated over the 2.27 square kilometer (km2) pond surface. Benthic flux of nitrogen species, averaged over all sites and dates, was about 80,000 kilograms per year (kg/yr), well above the adjective flux range of -50 to 1,500 kg/yr. By contrast, the average benthic flux of orthophosphate was about 12,000 kg/yr, well below the advective flux range of 21,500 to 30,000 kg/yr. Initial benthic flux estimates were also made for trace metals, including copper, nickel, iron, and manganese. These analyses indicated that the two sites, Inlet and Deep, have different pore-water profiles, with Inlet exhibiting much higher benthic flux estimates for nickel, iron, and manganese. These initial benthic-flux values reported for macronutrients are particularly impressive in magnitude when one considers that diffusive flux of dissolved solutes based on pore-water profiles provides a conservative determination that may be enhanced by other biogeochemical processes. These enhancement processes (Boudreau and Jorgensen, 2001) include bioturbation, bioirrigation, wind resuspension, and potential groundwater inflows, some of which are captured in core-incubation experiments (Kuwabara and others, 2009). Hence, the values reported herein represent lower bounds to indicate the potential importance of such internal solute sources. The elevated diffusive fluxes for nutrients in the pond relative to the adjacent estuary indicate that vertical nutrient transport between the pond bed and water column is consistently an important (and at times the most important) source of nutrients that stimulate phytoplankton growth in the water column. One might therefore reasonably hypothesize that this benthic transport of biologically reactive solutes (both nutrients and toxicants) represents the most important step at the base of the food web for trophic transfer.

Diachronous benthic δ18O responses during late Pleistocene terminations

NASA Astrophysics Data System (ADS)

Lisiecki, Lorraine E.; Raymo, Maureen E.

2009-09-01

Benthic δ18O is often used as a stratigraphic tool to place marine records on a common age model and as a proxy for the timing of ice volume/sea level change. However, Skinner and Shackleton (2005) found that the timing of benthic δ18O change at the last termination differed by 3900 years between one Atlantic site and one Pacific site. These results suggest that benthic δ18O change may not always accurately record the timing of deglaciation. We compare benthic δ18O records from 20 Atlantic sites and 14 Pacific sites to evaluate systematic differences in the timing of terminations in benthic δ18O. Analysis of sedimentation rates derived from the alignment of benthic δ18O suggests a statistically significant Atlantic lead over Pacific benthic δ18O change during the last six terminations. We estimate an average Pacific benthic δ18O lag of 1600 years for Terminations 1-5, slightly larger than the delay expected from ocean mixing rates given that most glacial meltwater probably enters the North Atlantic. We additionally find evidence of ˜4000-year Pacific δ18O lags at approximately 128 ka and 330 ka, suggesting that stratigraphic correlation of δ18O has the potential to generate age model errors of several thousand years during terminations. A simple model demonstrates that these lags can be generated by diachronous temperature changes and do not require slower circulation rates. Most importantly, diachronous benthic δ18O responses must be taken into account when comparing Atlantic and Pacific benthic δ18O records or when using benthic δ18O records as a proxy for the timing of ice volume change.

Characterization and testing of a new environmental chamber

NASA Astrophysics Data System (ADS)

Leskinen, A.; Yli-Pirilä, P.; Kuuspalo, K.; Sippula, O.; Jalava, P.; Hirvonen, M.-R.; Jokiniemi, J.; Virtanen, A.; Komppula, M.; Lehtinen, K. E. J.

2015-06-01

A 29 m3 Teflon chamber, designed for studies on the aging of combustion aerosols, at the University of Eastern Finland is described and characterized. The chamber is part of a research facility, called Ilmari, where small-scale combustion devices, a dynamometer for vehicle exhaust studies, dilution systems, the chamber, and cell and animal exposure devices are located side by side under the same roof. The small surface-to-volume ratio of the chamber enables reasonably long experiment times, with particle wall loss rate constants of 0.088, 0.080, 0.045, and 0.040 h-1 for polydisperse, 50, 100, and 200 nm monodisperse aerosols, respectively. The NO2 photolysis rate can be adjusted from 0 to 0.62 min-1. The irradiance spectrum is centered at either 350 or 365 nm, and the maximum irradiance, produced by up to 160 blacklight lamps, is 29.7 W m-2, which corresponds to the ultraviolet (UV) irradiance in Central Finland at noon on a sunny day in the midsummer. The temperature inside the chamber is uniform and can be kept at 25±1 °C. The chamber is kept in an overpressure with a moving top frame, which reduces sample dilution and entrance of contamination during an experiment. The functionality of the chamber was tested with oxidation experiments of toluene, resulting in secondary organic aerosol (SOA) yields of 12-42%, depending on the initial conditions, such as NOx concentration and UV irradiation. The highest gaseous oxidation product yields of 12.4-19.5% and 5.8-19.5% were detected with ions corresponding to methyl glyoxal (m/z 73.029) and 4-oxo-2-pentenal (m/z 99.044), respectively. Overall, reasonable yields of SOA and gaseous reaction products, comparable to those obtained in other laboratories, were obtained.

Radon detection in conical diffusion chambers: Monte Carlo calculations and experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rickards, J.; Golzarri, J. I.; Espinosa, G., E-mail: espinosa@fisica.unam.mx

2015-07-23

The operation of radon detection diffusion chambers of truncated conical shape was studied using Monte Carlo calculations. The efficiency was studied for alpha particles generated randomly in the volume of the chamber, and progeny generated randomly on the interior surface, which reach track detectors placed in different positions within the chamber. Incidence angular distributions, incidence energy spectra and path length distributions are calculated. Cases studied include different positions of the detector within the chamber, varying atmospheric pressure, and introducing a cutoff incidence angle and energy.

Benthic Macroinvertebrate Assemblages and Environmental Correlates in Springs of the Ridge and Valley Province

EPA Science Inventory

Springs are unique features in the landscape that provide important habitat for benthic invertebrates, yet there are few studies characterizing the distribution of benthic macro invertebrates in springs. Benthic macroinvertebrate and water quality data were collected at 35 spring...

AXIALLY ORIENTED SECTIONS OF NUMMULITIDS: A TOOL TO INTERPRET LARGER BENTHIC FORAMINIFERAL DEPOSITS

PubMed Central

Hohenegger, Johann; Briguglio, Antonino

2015-01-01

The “critical shear velocity” and “settling velocity” of foraminiferal shells are important parameters for determining hydrodynamic conditions during deposition of Nummulites banks. These can be estimated by determining the size, shape, and density of nummulitid shells examined in axial sections cut perpendicular to the bedding plane. Shell size and shape can be determined directly from the shell diameter and thickness, but density must be calculated indirectly from the thin section. Calculations using the half-tori method approximate shell densities by equalizing the chamber volume of each half whorl, based on the half whorl’s lumen area and its center of gravity. Results from this method yield the same lumen volumes produced empirically by micro-computed tomography. The derived hydrodynamic parameters help estimate the minimum flow velocities needed to entrain nummulitid tests and provide a potential tool to account for the nature of their accumulations. PMID:26166914

AXIALLY ORIENTED SECTIONS OF NUMMULITIDS: A TOOL TO INTERPRET LARGER BENTHIC FORAMINIFERAL DEPOSITS.

PubMed

Hohenegger, Johann; Briguglio, Antonino

2012-04-01

The "critical shear velocity" and "settling velocity" of foraminiferal shells are important parameters for determining hydrodynamic conditions during deposition of Nummulites banks. These can be estimated by determining the size, shape, and density of nummulitid shells examined in axial sections cut perpendicular to the bedding plane. Shell size and shape can be determined directly from the shell diameter and thickness, but density must be calculated indirectly from the thin section. Calculations using the half-tori method approximate shell densities by equalizing the chamber volume of each half whorl, based on the half whorl's lumen area and its center of gravity. Results from this method yield the same lumen volumes produced empirically by micro-computed tomography. The derived hydrodynamic parameters help estimate the minimum flow velocities needed to entrain nummulitid tests and provide a potential tool to account for the nature of their accumulations.

Numerical Investigation of Different Radial Inlet Forms for Centrifugal Compressor and Influence of the Deflectors Number by Means of Computational Fluid Dynamics Methods with Computational Model Validation

NASA Astrophysics Data System (ADS)

Kozhukhov, Y. V.; Yun, V. K.; Reshetnikova, L. V.; Prokopovich, M. V.

2015-08-01

The goal of this work is numerical experiments for five different types of the centrifugal compressor's inlet chambers with the help of CFD-methods and comparison of the computational results with the results of the real experiment which was held in the Nevskiy Lenin Plant in Saint-Petersburg. In the context of one of the chambers the influence of deflectors on its characteristics was investigated. The objects of investigation are 5 inlet chambers of different types which differ from each other by deflectors’ existence and by its number. The comparative analyze of the results of numerical and real experiments was held by means of comparison of relative velocity and static pressure coefficient distribution on hub and shroud region, and also by means of loss coefficient values change for all five chambers. As a result of the numerical calculation the quantitative and qualitative departure of CFD- calculations results and real experiment were found out. The investigation of the influence of the number of deflectors on flow parameters was carried out. The results of the study prove that the presence of the deflectors on flow path significantly increases the probability of the flow separations and reversed flows appearance on them. At the same time, the complete absence of the deflectors in the chamber significantly increases circumferential distortion of the flow; however the loss coefficient decreases anyway, the high values of which are caused by the shock flow existence. Thus, the profiling of the deflectors of the inlet chamber should be given a special attention.

APPLICATION OF TWO INDICES OF BENTHIC COMMUNITY CONDITION IN CHESAPEAKE BAY

EPA Science Inventory

The Chesapeake Bay Benthic Index of Biotic Integrity (B-161) and the Environmental Monitoring and Assessment Program's Virginian Province Benthic Index (EMAP-VP BI) were applied to 294 sampling events in Chesapeake Bay and the results were compared. These benthic indices are inte...

GEMINI-TITAN (GT)-III - WEIGHTLESSNESS EXPERIMENT - AMES RESEARCH CENTER (ARC), CA

NASA Image and Video Library

1965-03-19

S65-18766 (March 1965) --- Diagram of experiment planned for the Gemini-Titan 3 mission scheduled on March 23, 1965, to find out if there are effects of weightlessness on individual living cells. The round canister (top) shows the experiment package. It will contain eight identical chambers, each with sections of sperm, eggs and fixative. Cells are eggs of the spiny, black sea animal, the sea urchin. Bottom panel shows the three stages of each chamber. From left in the first stage, sperm, eggs and fixative are separated. By turning the handle, astronauts will fertilize a certain portion of the eggs, which will begin to divide. At 20 minutes after launch, further turns of the handle will force fixative into two chambers and stop cell division. At 70 minutes after launch, cell division in four more chambers will be stopped, and just prior to re-entry, growth of the remaining two chambers will be terminated by a turn of the handle. This system will allow study after the flight of how cells divided after various time periods in weightlessness. Abnormalities would suggest weightlessness effects on living tissue and possible hazard to prolonged manned spaceflight.

Ecological periodic tables for benthic macrofaunal usage of estuarine habitats: Insights from a case study in Tillamook Bay, Oregon, USA

NASA Astrophysics Data System (ADS)

Ferraro, Steven P.; Cole, Faith A.

2012-05-01

This study validates the ecological relevance of estuarine habitat types to the benthic macrofaunal community and, together with previous similar studies, suggests they can serve as elements in ecological periodic tables of benthic macrofaunal usage in the bioregion. We compared benthic macrofaunal Bray-Curtis similarity and the means of eight benthic macrofaunal community measures across seven habitat types in Tillamook Bay, Oregon, USA: intertidal eelgrass (Zostera marina), dwarf eelgrass (Zostera japonica), oyster (Crassostrea gigas) ground culture, burrowing mud shrimp (Upogebia pugettensis), burrowing ghost shrimp (Neotrypaea californiensis), sand and subtidal. Benthic macrofaunal Bray-Curtis similarity differed among all the habitats except ghost shrimp and sand. The habitat rank order on mean benthic macrofaunal species richness, abundance and biomass was dwarf eelgrass ≈ oyster ≥ mud shrimp ≈ eelgrass > sand ≈ ghost shrimp ≈ subtidal. The benthic macrofaunal habitat usage pattern in Tillamook Bay was, with a few exceptions, similar to that in two other US Pacific Northwest estuaries. The exceptions indicate variants of eelgrass and ghost shrimp habitat that differ in benthic macrofaunal usage perhaps due to differences in the coarseness of the sand fraction of the sediments in which they live. The similarities indicate periodic benthic macrofaunal usage patterns across the other habitat types extend over a wider geographic scale and range of environmental conditions than previously known.

Atmospheric scavenging exhaust

NASA Technical Reports Server (NTRS)

Fenton, D. L.; Purcell, R. Y.

1977-01-01

Solid propellant rocket exhaust was directly utilized to ascertain raindrop scavenging rates for hydrogen chloride. The airborne HCl concentration varied from 0.2 to 10.0 ppm and the raindrop sizes tested included 0.55 mm, 1.1 mm, and 3.0 mm. Two chambers were used to conduct the experiments. A large, rigid walled, spherical chamber stored the exhaust constituents while the smaller chamber housing all the experiments was charged as required with rocket exhaust HCl. Surface uptake experiments demonstrated an HCl concentration dependence for distilled water. Sea water and brackish water HCl uptake was below the detection limit of the chlorine-ion analysis technique employed. Plant life HCl uptake experiments were limited to corn and soybeans. Plant age effectively correlated the HCl uptake data. Metallic corrosion was not significant for single 20 minute exposures to the exhaust HCl under varying relative humidity.

Atmospheric scavenging of solid rocket exhaust effluents

NASA Technical Reports Server (NTRS)

Fenton, D. L.; Purcell, R. Y.

1978-01-01

Solid propellant rocket exhaust was directly utilized to ascertain raindrop scavenging rates for hydrogen chloride. Two chambers were used to conduct the experiments; a large, rigid walled, spherical chamber stored the exhaust constituents, while the smaller chamber housing all the experiments was charged as required with rocket exhaust HCl. Surface uptake experiments demonstrated an HCl concentration dependence for distilled water. Sea water and brackish water HCl uptake was below the detection limit of the chlorine-ion analysis technique used. Plant life HCl uptake experiments were limited to corn and soybeans. Plant age effectively correlated the HCl uptake data. Metallic corrosion was not significant for single 20 minute exposures to the exhaust HCl under varying relative humidity. Characterization of the aluminum oxide particles substantiated the similarity between the constituents of the small scale rocket and the full size vehicles.

Uptake of phytodetritus by benthic foraminifera under oxygen depletion at the Indian margin (Arabian Sea)

NASA Astrophysics Data System (ADS)

Enge, A. J.; Witte, U.; Kucera, M.; Heinz, P.

2014-04-01

Benthic foraminifera in sediments on the Indian margin of the Arabian Sea, where the oxygen minimum zone (OMZ) impinges on the continental slope, are exposed to particularly severe levels of oxygen depletion. Food supply for the benthic community is high but delivered in distinct pulses during upwelling and water mixing events associated with summer and winter monsoon periods. In order to investigate the response by benthic foraminifera to such pulsed food delivery under oxygen concentrations of less than 0.1 mL L-1 (4.5 μmol L-1), an in situ isotope labeling experiment (13C, 15N) was performed on the western continental slope of India at 540 m water depth (OMZ core region). The assemblage of living foraminifera (>125 μm) in the uppermost centimeter at this depth is characterized by an unexpectedly high population density of 3982 individuals 10 cm-2 and a strong dominance by few calcareous species. For the experiment, we concentrated on the nine most abundant taxa, which constitute 93% of the entire foraminiferal population at 0-1 cm sediment depth. Increased concentrations of 13C and 15N in the cytoplasm indicate that all investigated taxa took up labeled phytodetritus during the 4 day experimental phase. In total, these nine species had assimilated 113.8 mg C m-2 (17.5% of the total added carbon). Uptake of nitrogen by the three most abundant taxa (Bolivina aff. B. dilatata, Cassidulina sp., Bulimina gibba) was 2.7 mg N m-2 (2% of the total added nitrogen). The response to the offered phytodetritus varied largely among foraminiferal species with Uvigerina schwageri being by far the most important species in short-term processing, whereas the most abundant taxa Bolivina aff. B. dilatata and Cassidulina sp. showed comparably low uptake of the offered food. We suggest the observed species-specific differences are related to species biomass and specific feeding preferences. In summary, the experiment in the OMZ core region shows rapid processing of fresh phytodetritus by foraminifera under almost anoxic conditions. The uptake of large amounts of organic matter by few species within four days suggests that foraminifera may play an important role in short-term carbon cycling in the OMZ core region on the Indian margin.

Hyperbaric and hypobaric chamber fires: a 73-year analysis.

PubMed

Sheffield, P J; Desautels, D A

1997-09-01

Fire can be catastrophic in the confined space of a hyperbaric chamber. From 1923 to 1996, 77 human fatalities occurred in 35 hyperbaric chamber fires, three human fatalities in a pressurized Apollo Command Module, and two human fatalities in three hypobaric chamber fires reported in Asia, Europe, and North America. Two fires occurred in diving bells, eight occurred in recompression (or decompression) chambers, and 25 occurred in clinical hyperbaric chambers. No fire fatalities were reported in the clinical hyperbaric chambers of North America. Chamber fires before 1980 were principally caused by electrical ignition. Since 1980, chamber fires have been primarily caused by prohibited sources of ignition that an occupant carried inside the chamber. Each fatal chamber fire has occurred in an enriched oxygen atmosphere (> 28% oxygen) and in the presence of abundant burnable material. Chambers pressurized with air (< 23.5% oxygen) had the only survivors. Information in this report was obtained from the literature and from the Undersea and Hyperbaric Medical Society's Chamber Experience and Mishap Database. This epidemiologic review focuses on information learned from critical analyses of chamber fires and how it can be applied to safe operation of hypobaric and hyperbaric chambers.

COMPARISON OF TWO INDICES OF BENTHIC COMMUNITY CONDITION IN CHESAPEAKE BAY

EPA Science Inventory

The Chesapeake Benthic Index of Biotic Integrity (B-IBI) and the EMAP-VP Benthic Index were applied to samples from 239 sites in Chesapeake Bay. The B-IBI weights several community measures equally and uses a simple scoring system while the EMAP-VP Benthic Index uses discriminant...

Using Regional Distribution of Estuarine and Coastal Benthic Invertebrates to Calibrate Benthic Indices of Ecological Condition

EPA Science Inventory

The biogeography of marine benthic macroinvertebrates of the U.S. Atlantic coast from Delaware Bay north to Passamaquoddy Bay, Maine, was studied to define physical-chemical factors affecting broad taxa distributions and provide information needed to calibrate benthic indices of ...

A new plant chamber facility PLUS coupled to the atmospheric simulation chamber SAPHIR

NASA Astrophysics Data System (ADS)

Hohaus, T.; Kuhn, U.; Andres, S.; Kaminski, M.; Rohrer, F.; Tillmann, R.; Wahner, A.; Wegener, R.; Yu, Z.; Kiendler-Scharr, A.

2015-11-01

A new PLant chamber Unit for Simulation (PLUS) for use with the atmosphere simulation chamber SAPHIR (Simulation of Atmospheric PHotochemistry In a large Reaction Chamber) has been build and characterized at the Forschungszentrum Jülich GmbH, Germany. The PLUS chamber is an environmentally controlled flow through plant chamber. Inside PLUS the natural blend of biogenic emissions of trees are mixed with synthetic air and are transferred to the SAPHIR chamber where the atmospheric chemistry and the impact of biogenic volatile organic compounds (BVOC) can be studied in detail. In PLUS all important enviromental parameters (e.g. temperature, PAR, soil RH etc.) are well-controlled. The gas exchange volume of 9.32 m3 which encloses the stem and the leafes of the plants is constructed such that gases are exposed to FEP Teflon film and other Teflon surfaces only to minimize any potential losses of BVOCs in the chamber. Solar radiation is simulated using 15 LED panels which have an emission strength up to 800 μmol m-2 s-1. Results of the initial characterization experiments are presented in detail. Background concentrations, mixing inside the gas exchange volume, and transfer rate of volatile organic compounds (VOC) through PLUS under different humidity conditions are explored. Typical plant characteristics such as light and temperature dependent BVOC emissions are studied using six Quercus Ilex trees and compared to previous studies. Results of an initial ozonolysis experiment of BVOC emissions from Quercus Ilex at typical atmospheric concentrations inside SAPHIR are presented to demonstrate a typical experimental set up and the utility of the newly added plant chamber.

The crop growth research chamber

NASA Technical Reports Server (NTRS)

Wagenbach, Kimberly

1993-01-01

The Crop Growth Research Chamber (CGRC) has been defined by CELSS principle investigators and science advisory panels as a necessary ground-based tool in the development of a regenerative life support system. The focus of CGRC research will be on the biomass production component of the CELSS system. The ground-based Crop Growth Research Chamber is for the study of plant growth and development under stringently controlled environments isolated from the external environment. The chamber has importance in three areas of CELSS activities: (1) crop research; (2) system control and integration, and (3) flight hardware design and experimentation. The laboratory size of the CGRC will be small enough to allow duplication of the unit, the conducting of controlled experiments, and replication of experiments, but large enough to provide information representative of larger plant communities. Experiments will focus on plant growth in a wide variety of environments and the effects of those environments on plant production of food, water, oxygen, toxins, and microbes. To study these effects in a closed system, tight control of the environment is necessary.

Optimization of Selective Laser Melting by Evaluation Method of Multiple Quality Characteristics

NASA Astrophysics Data System (ADS)

Khaimovich, A. I.; Stepanenko, I. S.; Smelov, V. G.

2018-01-01

Article describes the adoption of the Taguchi method in selective laser melting process of sector of combustion chamber by numerical and natural experiments for achieving minimum temperature deformation. The aim was to produce a quality part with minimum amount of numeric experiments. For the study, the following optimization parameters (independent factors) were chosen: the laser beam power and velocity; two factors for compensating the effect of the residual thermal stresses: the scale factor of the preliminary correction of the part geometry and the number of additional reinforcing elements. We used an orthogonal plan of 9 experiments with a factor variation at three levels (L9). As quality criterias, the values of distortions for 9 zones of the combustion chamber and the maximum strength of the material of the chamber were chosen. Since the quality parameters are multidirectional, a grey relational analysis was used to solve the optimization problem for multiple quality parameters. As a result, according to the parameters obtained, the combustion chamber segments of the gas turbine engine were manufactured.

High vacuum tip-enhanced Raman spectroscope based on a scanning tunneling microscope.

PubMed

Fang, Yurui; Zhang, Zhenglong; Sun, Mengtao

2016-03-01

In this paper, we present the construction of a high-vacuum tip-enhanced Raman spectroscopy (HV-TERS) system that allows in situ sample preparation and measurement. A detailed description of the prototype instrument is presented with experimental validation of its use and novel ex situ experimental results using the HV-TERS system. The HV-TERS system includes three chambers held under a 10(-7) Pa vacuum. The three chambers are an analysis chamber, a sample preparation chamber, and a fast loading chamber. The analysis chamber is the core chamber and contains a scanning tunneling microscope (STM) and a Raman detector coupled with a 50 × 0.5 numerical aperture objective. The sample preparation chamber is used to produce single-crystalline metal and sub-monolayer molecular films by molecular beam epitaxy. The fast loading chamber allows ex situ preparation of samples for HV-TERS analysis. Atomic resolution can be achieved by the STM on highly ordered pyrolytic graphite. We demonstrate the measurement of localized temperature using the Stokes and anti-Stokes TERS signals from a monolayer of 1,2-benzenedithiol on a gold film using a gold tip. Additionally, plasmonic catalysis can be monitored label-free at the nanoscale using our device. Moreover, the HV-TERS experiments show simultaneously activated infrared and Raman vibrational modes, Fermi resonance, and some other non-linear effects that are not observed in atmospheric TERS experiments. The high spatial and spectral resolution and pure environment of high vacuum are beneficial for basic surface studies.

A review of chamber experiments for determining specific emission rates and investigating migration pathways of flame retardants

NASA Astrophysics Data System (ADS)

Rauert, Cassandra; Lazarov, Borislav; Harrad, Stuart; Covaci, Adrian; Stranger, Marianne

2014-01-01

The widespread use of flame retardants (FRs) in indoor products has led to their ubiquitous distribution within indoor microenvironments with many studies reporting concentrations in indoor air and dust. Little information is available however on emission of these compounds to air, particularly the measurement of specific emission rates (SERs), or the migration pathways leading to dust contamination. Such knowledge gaps hamper efforts to develop understanding of human exposure. This review summarizes published data on SERs of the following FRs released from treated products: polybrominated diphenyl ethers (PBDEs), hexabromocyclododecanes (HBCDs), tetrabromobisphenol-A (TBBPA), novel brominated flame retardants (NBFRs) and organophosphate flame retardants (PFRs), including a brief discussion of the methods used to derive these SERs. Also reviewed are published studies that utilize emission chambers for investigations/measurements of mass transfer of FRs to dust, discussing the chamber configurations and methods used for these experiments. A brief review of studies investigating correlations between concentrations detected in indoor air/dust and possible sources in the microenvironment is included along with efforts to model contamination of indoor environments. Critical analysis of the literature reveals that the major limitations with utilizing chambers to derive SERs for FRs arise due to the physicochemical properties of FRs. In particular, increased partitioning to chamber surfaces, airborne particles and dust, causes loss through “sink” effects and results in long times to reach steady state conditions inside the chamber. The limitations of chamber experiments are discussed as well as their potential for filling gaps in knowledge in this area.

Distribution of living larger benthic foraminifera in littoral environments of the United Arab Emirates

NASA Astrophysics Data System (ADS)

Fiorini, Flavia; Lokier, Stephen W.

2015-04-01

The distribution of larger benthic foraminifera in Recent littoral environment of the United Arab Emirates (Abu Dhabi and Western regions) was investigated with the aim of understanding the response of those foraminifera to an increase in water salinity. For this purpose, 100 sediment samples from nearshore shelf, beach-front, channel, lagoon, and intertidal environment were collected. Sampling was undertaken at a water depth shallower than 15 m in water with a temperature of 22 to 35˚C, a salinity ranging from 40 to 60‰ and a pH of 8. Samples were stained with rose Bengal at the moment of sample collection in order to identify living specimens. The most abundant epiphytic larger benthic foraminifera in the studied area were Peneroplis pertusus and P. planatus with less common Spirolina areatina, S. aciculate and Sorites marginalis. The living specimens of the above mentioned species with normal test growing were particularly abundant in the nearshore shelf and lagoonal samples collected on seaweed. Dead specimens were concentrated in the coarser sediments of the beach-front, probably transported from nearby environments. Shallow coastal ponds are located in the upper intertidal zone and have a maximum salinity of 60‰ and contain abundant detached seagrass. Samples collected from these ponds possess a living foraminifera assemblage dominated by Peneroplis pertusus and P. planatus. High percentages (up to 50% of the stained assemblage) of Peneroplis presented abnormality in test growth, such as the presence of multiple apertures with reduced size, deformation in the general shape of the test, irregular suture lines and abnormal coiling. The high percentage of abnormal tests reflects natural environmental stress mainly caused by high and variable salinity. The unique presence of living epiphytic species, suggests that epiphytic foraminifera may be transported into the pond together with seagrass and continued to live in the pond. This hypothesis is supported by the fact that all of the foraminifera with abnormal test growth were adults and exhibiting a normal proloculus and normal growth of the earlier chambers.

Specifications for and preliminary design of a plant growth chamber for orbital experimental experiments

NASA Technical Reports Server (NTRS)

Sweet, H. C.; Simmonds, R. C.

1976-01-01

It was proposed that plant experiments be performed on board the space shuttle. To permit the proper execution of most tests, the craft must contain a plant growth chamber which is adequately designed to control those environmental factors which can induce changes in a plant's physiology and morphology. The various needs of, and environmental factors affecting, plants are identified. The permissilbe design, construction and performance limits for a plant-growth chamber are set, and tentative designs were prepared for units which are compatible with both the botanical requirements and the constraints imposed by the space shuttle.

A straw chambers' tracker for the high rate experiment 835 at the Fermilab accumulator

NASA Astrophysics Data System (ADS)

Bagnasco, S.; Dughera, G.; Giraudo, G.; Govi, G.; Marchetto, F.; Menichetti, E.; Pastrone, N.; Rumerio, P.; Trapani, P. P.

1998-02-01

Two layers of proportional drift tubes (aluminum mylar straws) are staggered in two cylindrical light chambers to measure charged particles' azimuthal angle. To stand the high rates (˜10 kHz/ cm2) and minimize the pile-up of the high luminosity experiment 835 at FNAL, a fast ASIC Amplifier-Shaper-Discriminator (ASD-8B) was chosen. The front-end electronics, designed exclusively with SMD components, was mounted on the downstream end plug of each chamber to avoid oscillations and noise. Design, construction and operational performances of these detectors are presented.

Design considerations of a thermally stabilized continuous flow electrophoresis chamber 2

NASA Technical Reports Server (NTRS)

Jandebeur, T. S.

1982-01-01

The basic adjustable parameters of a Beckman Continouous Particle Electrophoresis (CPE) Apparatus are investigated to determine the optimum conditions for ground based operation for comparison with space experiments. The possible application of electrically insulated copper/aluminum chamber walls is evaluated as a means to thermally stabilize or equilibrate lateral temperature gradients which exist on the walls of conventional plastic chambers and which distort the rectilinear base flow of buffer through the chamber, significantly affecting sample resolution.

NASDA life science experiment facilities for ISS

NASA Astrophysics Data System (ADS)

Tanigaki, F.; Masuda, D.; Yano, S.; Fujimoto, N.; Kamigaichi, S.

National Space Development Agency of Japan (NASDA) has been developing various experiment facilities to conduct space biology researches in KIBO (JEM). The Cell Biology Experiment Facility (CBEF) and the Clean Bench (CB) are installed into JEM Life Science Rack. The Biological Experiment Units (BEU) are operated in the CBEF and the CB for many kinds of experiments on cells, tissues, plants, microorganisms, or small animals. It is possible for all researchers to use these facilities under the system of the International Announcement of Opportunity. The CBEF is a CO2 incubator to provide a controlled environment (temperature, humidity, and CO2 concentration), in which a rotating table is equipped to make variable gravity (0-2g) for reference experiments. The containers called "Canisters" can be used to install the BEU in the CBEF. The CBEF supplies power, command, sensor, and video interfaces for the BEU through the utility connectors of Canisters. The BEU is a multiuser system consisting of chambers and control segments. It is operated by pre-set programs and by commands from the ground. NASDA is currently developing three types of the BEU: the Plant Experiment Unit (PEU) for plant life cycle observations and the Cell Experiment Unit (CEU1&2) for cell culture experiments. The PEU has an automated watering system with a water sensor, an LED matrix as a light source, and a CCD camera to observe the plant growth. The CEUs have culture chambers and an automated cultural medium exchange system. Engineering models of the PEU and CEU1 have been accomplished. The preliminary design of CEU2 is in progress. The design of the BEU will be modified to meet science requirements of each experiment. The CB provides a closed aseptic work-space (Operation Chamber) with gloves for experiment operations. Samples and the BEU can be manually handled in the CB. The CB has an air lock (Disinfection Chamber) to prevent contamination, and HEPA filters to make class-100-equivalent clean air inside the Operation Chamber. Alcohol swabs and built-in ultraviolet lamps are used to sterilize instruments and insides of the CB. The phase contrast / fluorescent microscope is equipped in the Operation Chamber to support experiments. The observed image is monitored either on the CB LCD display or on the ground through a video downlink channel. Researchers on the ground can also operate the microscope with its remote control function. Flight models of the CBEF and the CB are scheduled for completion in 2002.

Biological, habitat, and water quality conditions in the upper Merced River drainage, Yosemite National Park, California, 1993-1996

USGS Publications Warehouse

Brown, Larry R.; Short, Terry M.

1999-01-01

The general conclusion from these studies is that water quality in the upper Merced River was very good from 1993-1996, despite high levels of human activities in some areas. Fish communities did not appear to be a useful indicator of habitat and water quality because of low species richness and the apparent importance of physical barriers in determining species distributions. Measurements of fish densities and size-distributions might be useful, but would be logistically difficult. Benthic algae and benthic invertebrates do appear to be useful in monitoring environmental conditions. Benthic algae may be more sensitive than benthic invertebrates to small environmental differences within years. Benthic algae were also more responsive than benthic invertebrates to differences in discharge between years. Thus, benthic invertebrates may be more useful in comparing environmental conditions between years, independent of discharge conditions.

Effects of Prior Experience on Shelter-Seeking Behavior of Juvenile American Lobsters.

PubMed

Bayer, Skylar R; Bianchi, Katherine M; Atema, Jelle; Jacobs, Molly W

2017-04-01

Shelter-seeking behaviors are vital for survival for a range of juvenile benthic organisms. These behaviors may be innate or they may be affected by prior experience. After hatching, American lobsters Homarus americanus likely first come into contact with shelter during the late postlarval (decapodid) stage, known as stage IV. After the subsequent molt to the first juvenile stage (stage V), they are entirely benthic and are thought to be highly cryptic. We hypothesized that postlarval (stage IV) experience with shelter would carry over into the first juvenile stage (stage V) and reduce the time needed for juveniles to locate and enter shelters (sheltering). We found some evidence of a carryover effect, but not the one we predicted: stage V juveniles with postlarval shelter experience took significantly longer to initiate sheltering. We also hypothesized that stage V juveniles would demonstrate learning by relocating shelters more quickly with immediate prior experience. Our findings were mixed. In a maze, juveniles with immediate prior experience were faster to regain visual contact with shelter, suggesting that they had learned the location of the shelter. In contrast, there was no significant effect of immediate prior experience on time to initiate sheltering in an open arena, or in the maze after juveniles had regained visual contact. We conclude that very young (stage V) juvenile lobsters modify their shelter-seeking behavior based on prior experiences across several timescales. Ecologically relevant variation in habitat exposure among postlarval and early juvenile lobsters may influence successful recruitment in this culturally and commercially important fishery species.

Benthic protists: the under-charted majority.

PubMed

Forster, Dominik; Dunthorn, Micah; Mahé, Fréderic; Dolan, John R; Audic, Stéphane; Bass, David; Bittner, Lucie; Boutte, Christophe; Christen, Richard; Claverie, Jean-Michel; Decelle, Johan; Edvardsen, Bente; Egge, Elianne; Eikrem, Wenche; Gobet, Angélique; Kooistra, Wiebe H C F; Logares, Ramiro; Massana, Ramon; Montresor, Marina; Not, Fabrice; Ogata, Hiroyuki; Pawlowski, Jan; Pernice, Massimo C; Romac, Sarah; Shalchian-Tabrizi, Kamran; Simon, Nathalie; Richards, Thomas A; Santini, Sébastien; Sarno, Diana; Siano, Raffaele; Vaulot, Daniel; Wincker, Patrick; Zingone, Adriana; de Vargas, Colomban; Stoeck, Thorsten

2016-08-01

Marine protist diversity inventories have largely focused on planktonic environments, while benthic protists have received relatively little attention. We therefore hypothesize that current diversity surveys have only skimmed the surface of protist diversity in marine sediments, which may harbor greater diversity than planktonic environments. We tested this by analyzing sequences of the hypervariable V4 18S rRNA from benthic and planktonic protist communities sampled in European coastal regions. Despite a similar number of OTUs in both realms, richness estimations indicated that we recovered at least 70% of the diversity in planktonic protist communities, but only 33% in benthic communities. There was also little overlap of OTUs between planktonic and benthic communities, as well as between separate benthic communities. We argue that these patterns reflect the heterogeneity and diversity of benthic habitats. A comparison of all OTUs against the Protist Ribosomal Reference database showed that a higher proportion of benthic than planktonic protist diversity is missing from public databases; similar results were obtained by comparing all OTUs against environmental references from NCBI's Short Read Archive. We suggest that the benthic realm may therefore be the world's largest reservoir of marine protist diversity, with most taxa at present undescribed. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Availability of Alternatives and the Processing of Scalar Implicatures: A Visual World Eye-tracking Study

ERIC Educational Resources Information Center

Degen, Judith; Tanenhaus, Michael K.

2016-01-01

Two visual world experiments investigated the processing of the implicature associated with "some" using a "gumball paradigm." On each trial, participants saw an image of a gumball machine with an upper chamber with orange and blue gumballs and an empty lower chamber. Gumballs dropped to the lower chamber, creating a contrast…

Compound-Specific Amino Acid Isotopic Analysis of Benthic Food Webs in the Chukchi Sea

NASA Astrophysics Data System (ADS)

Zhang, M.; Cooper, L. W.; Biasatti, D. M.; Grebmeier, J. M.

2014-12-01

The Chukchi Sea is known for locally high standing stocks of benthic macrofauna and strong coupling between pelagic-benthic components of the ecosystem. However, benthic food structure is not fully understood, due to varied sources of particulate organic matter (POM) and the high diversity of benthic invertebrates. We provide the first demonstration of the application of compound-specific amino acid isotope analysis to study the dietary sources and trophic structure for this Arctic marginal sea. About 20 stations in Chukchi Sea were sampled during cruises in August of 2012 and 2013. At each station, phytoplankton, POM and benthic fauna were collected, processed and analyzed using GC-C-IRMS (gas chromatography-combustion-isotope ratio mass spectrometry). Among benthic fauna, dominant species included the following taxonomic groups: Ophiuroidea, Amphipoda, Polychaeta, Gastropoda, Bivalvia, and Cnidaria. The benthic fauna showed similar patterns of individual amino acid δ13C, with glycine the most enriched in 13C and leucine the most depleted in 13C. Specific amino acids including phenylalanine showed spatial variability in δ13C and δ15N values within the sampled area, indicating contributions of different dietary sources including phytoplankton, sea ice algae, benthic algae and terrestrial organic materials. δ15N values of individual amino acids such as the difference between glutamic acid and phenylalanine, i.e. Δ15Nglu-phe (δ15Nglu - δ15Nphe), were also used to identify trophic levels of benthic invertebrates relative to estimates available from bulk δ15N values. These data will ultimately be used to evaluate the spatial variability of organic carbon sources and trophic level interactions of dominant benthic species in the Chukchi Sea.

Mussels can both outweigh and interact with the effects of terrestrial to freshwater resource subsidies on littoral benthic communities.

PubMed

Smith, Bethany R; Aldridge, David C; Tanentzap, Andrew J

2018-05-01

Litterfall is an important resource subsidy for lake ecosystems that primarily accumulates in littoral zones. Bivalves are abundant within littoral zones and may modify the effects of terrestrial resource subsidies through trophic interactions and engineering their surrounding habitat. Leaf inputs to lakes and freshwater mussel abundances are changing throughout the boreal ecoregion so we set out to investigate how the co-occurring benthic community might respond. We set up an in situ mesocosm experiment in Ramsey Lake, Sudbury, ON, Canada. Mesocosms contained sediments of either 5% or 35% terrestrial organic matter (tOM), into which we placed mussels (Elliptio complanata) at differing densities (0, 0.4 and 2musselsm -2 , with a sham mussel treatment at 0.4musselsm -2 ). Over one month we recorded the sediment chemistry (dissolved organic carbon, nitrogen and phosphorus), littoral organisms (benthic algae and zooplankton) and mussel growth. At high mussel densities we recorded a 90%, 80%, 45% and 40% reduction in phosphorus, dissolved organic carbon, nitrogen and benthic diatoms, respectively, whereas at low mussel densities we observed a 3-fold increase in zooplankton. We discuss that these results were caused by a combination of bioturbation and trophic interactions. Benthic diatom concentrations were also reduced by 20% in sediments of 35% tOM, likely due to shading and competition with bacteria. Mussel growth increased at high mussel densities but was offset at high tOM, likely due to the organic matter interfering with filter feeding. Our results suggest that mussels can alter the geochemical composition of sediments and abundances of associated littoral organisms, in some cases regardless of tOM quantity. Therefore, the dominant top-down control exerted by freshwater mussels may outweigh bottom-up effects of tOM additions. Generally, our study reveals the importance of considering dominant species when studying the effects of cross-ecosystem resource fluxes. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Benthic Oxygen Demand in Three Former Salt Ponds Adjacent to South San Francisco Bay, California

USGS Publications Warehouse

Topping, Brent R.; Kuwabara, James S.; Athearn, Nicole D.; Takekawa, John Y.; Parcheso, Francis; Henderson, Kathleen D.; Piotter, Sara

2009-01-01

Sampling trips were coordinated in the second half of 2008 to examine the interstitial water in the sediment and the overlying bottom waters of three shallow (average depth 2 meters). The water column at all deployment sites was monitored with dataloggers for ancillary water-quality parameters (including dissolved oxygen, salinity, specific conductance, temperature, and pH) to facilitate the interpretation of benthic-flux results. Calculated diffusive benthic flux of dissolved (0.2-micron filtered) oxygen was consistently negative (that is, drawn from the water column into the sediment) and ranged between -0.5 x 10-6 and -37 x 10-6 micromoles per square centimeter per second (site averages depicted in table 2). Assuming pond areas of 1.0, 1.4, and 2.3 square kilometers for ponds A16, A14, and A3W, respectively, this converts to an oxygen mass flux into the ponds' sediment ranging from -1 to -72 kilograms per day. Diffusive oxygen flux into the benthos (listed as negative) was lowest in pond A14 (-0.5 x 10-6 to -1.8 x 10-6 micromoles per square centimeter per second) compared with diffusive flux estimates for ponds A16 and A3W (site averages -26 x 10-6 to -35 x 10-6 and -34 x 10-6 to -37 x 10-6 micromoles per square centimeter per second, respectively). These initial diffusive-flux estimates are of the order of magnitude of those measured in the South Bay using core-incubation experiments (Topping and others, 2004), which include bioturbation and bioirrigation effects. Estimates of benthic oxygen demand reported herein, based on molecular diffusion, serve as conservative estimates of benthic flux because solute transport across the sediment-water interface can be enhanced by multidisciplinary processes including bioturbation, bioirrigation, ground-water advection, and wind resuspension (Kuwabara and others, 2009).

Effects of Karenia brevis on clearance rates and bioaccumulation of brevetoxins in benthic suspension feeding invertebrates.

PubMed

Echevarria, Michael; Naar, Jerome P; Tomas, Carmelo; Pawlik, Joseph R

2012-01-15

Blooms of the toxic alga Karenia brevis occur along coastlines where sessile suspension feeding invertebrates are common components of benthic communities. We studied the effects of K. brevis on four benthic suspension feeding invertebrates common to the coast of the SE United States: the sponge Haliclona tubifera, the bryozoan Bugula neritina, the bivalve Mercenaria mercenaria, and the tunicate Styela plicata. In controlled laboratory experiments, we determined the rate at which K. brevis was cleared from the seawater by these invertebrates, the effect of K. brevis on clearance rates of a non-toxic phytoplankton species, Rhodomonas sp., and the extent to which brevetoxins bioaccumulated in tissues of invertebrates using an enzyme-linked immunosorbent assay (ELISA). All four invertebrate species cleared significant quantities of K. brevis from seawater, with mean clearance rates ranging from 2.27 to 6.71 L g h⁻¹ for H. tubifera and S. plicata, respectively. In the presence of K. brevis, clearance rates of Rhodomonas sp. by B. neritina and S. plicata were depressed by 75% and 69%, respectively, while clearance rates by H. tubifera and M. mercenaria were unaffected. Negative effects of K. brevis were impermanent; after a recovery period of 13 h, B. neritina and S. plicata regained normal clearance rates. All four invertebrates accumulated high concentrations of brevetoxin after a 4h exposure to K. brevis, but when animals were transferred to filtered seawater for 15 h after exposure, brevetoxin concentrations in the tissues of H. tubifera and B. neritina decreased by ∼80%, while there was no change in toxin concentration in the tissues of S. plicata and M. mercenaria. High cell concentrations of K. brevis may cause a suppression of clearance rates in benthic suspension feeding invertebrates, resulting in a positive feedback for bloom formation. Also, high concentrations of toxin may accumulate in the tissues of benthic suspension feeding invertebrates that may be transferred to higher-level consumers. Copyright © 2011 Elsevier B.V. All rights reserved.

Modeling the temporal dynamics of intertidal benthic infauna biomass with environmental factors: Impact assessment of land reclamation.

PubMed

Yang, Ye; Chui, Ting Fong May; Shen, Ping Ping; Yang, Yang; Gu, Ji Dong

2018-03-15

Anthropogenic activities such as land reclamation are threatening tidal marshes worldwide. This study's hypothesis is that land reclamation in a semi-enclosed bay alters the seasonal dynamics of intertidal benthic infauna, which is a key component in the tidal marsh ecosystem. Mai Po Tidal Marsh, Deep Bay, Pearl River Estuary, China was used as a case study to evaluate the hypothesis. Ecological models that simulate benthic biomass dynamics with governing environmental factors were developed, and various scenario experiments were conducted to evaluate the impact of reclamations. Environmental variables, selected from the areas of hydrodynamics, meteorology, and water quality based on correlation analysis, were used to generate Bayesian regression models for biomass prediction. The best-performing model, which considered average water age (i.e., a hydrodynamic indicator of estuarine circulation) in the previous month, salinity variation (i.e., standard deviation of salinity), and the total sunny period in the current month, captured well both seasonal and yearly trends in the benthic infauna observations from 2002 to 2008. This model was then used to simulate biomass dynamics with varying inputs of water age and salinity variation from coastal numerical models of different reclamation scenarios. The simulation results suggest that the reclamation in 2007 decreased the spatial and annual average benthic infauna biomass in the tidal marsh by 20%, which agreed with the 28% biomass decrease recorded by field survey. The range of biomass seasonal variation also decreased significantly from 2.1 to 230.5g/m 2 (without any reclamation) to 1.2 to 131.1g/m 2 (after the 2007 reclamation), which further demonstrates the substantial ecological impact of reclamation. The ecological model developed in this study could simulate seasonal biomass dynamics and evaluate the ecological impact of reclamation projects. It can therefore be applied to evaluate the ecological impact of coastal engineering projects for tidal marsh management, conservation, and restoration. Copyright © 2017 Elsevier B.V. All rights reserved.

Mussel beds are biological power stations on intertidal flats

NASA Astrophysics Data System (ADS)

Engel, Friederike G.; Alegria, Javier; Andriana, Rosyta; Donadi, Serena; Gusmao, Joao B.; van Leeuwe, Maria A.; Matthiessen, Birte; Eriksson, Britas Klemens

2017-05-01

Intertidal flats are highly productive areas that support large numbers of invertebrates, fish, and birds. Benthic diatoms are essential for the function of tidal flats. They fuel the benthic food web by forming a thin photosynthesizing compartment in the top-layer of the sediment that stretches over the vast sediment flats during low tide. However, the abundance and function of the diatom film is not homogenously distributed. Recently, we have realized the importance of bivalve reefs for structuring intertidal ecosystems; by creating structures on the intertidal flats they provide habitat, reduce hydrodynamic stress and modify the surrounding sediment conditions, which promote the abundance of associated organisms. Accordingly, field studies show that high chlorophyll a concentration in the sediment co-vary with the presence of mussel beds. Here we present conclusive evidence by a manipulative experiment that mussels increase the local biomass of benthic microalgae; and relate this to increasing biomass of microalgae as well as productivity of the biofilm across a nearby mussel bed. Our results show that the ecosystem engineering properties of mussel beds transform them into hot spots for primary production on tidal flats, highlighting the importance of biological control of sedimentary systems.

Macrofouling communities and the degradation of plastic bags in the sea: an in situ experiment.

PubMed

Pauli, Nora-Charlotte; Petermann, Jana S; Lott, Christian; Weber, Miriam

2017-10-01

The increasing amount of plastic littered into the sea may provide a new substratum for benthic organisms. These marine fouling communities on plastic have not received much scientific attention. We present, to our knowledge, the first comprehensive analysis of their macroscopic community composition, their primary production and the polymer degradation comparing conventional polyethylene (PE) and a biodegradable starch-based plastic blend in coastal benthic and pelagic habitats in the Mediterranean Sea. The biomass of the fouling layer increased significantly over time and all samples became heavy enough to sink to the seafloor. The fouling communities, consisting of 21 families, were distinct between habitats, but not between polymer types. Positive primary production was measured in the pelagic, but not in the benthic habitat, suggesting that large accumulations of floating plastic could pose a source of oxygen for local ecosystems, as well as a carbon sink. Contrary to PE, the biodegradable plastic showed a significant loss of tensile strength and disintegrated over time in both habitats. These results indicate that in the marine environment, biodegradable polymers may disintegrate at higher rates than conventional polymers. This should be considered for the development of new materials, environmental risk assessment and waste management strategies.

A decline in benthic foraminifera following the deepwater horizon event in the northeastern Gulf of Mexico.

PubMed

Schwing, Patrick T; Romero, Isabel C; Brooks, Gregg R; Hastings, David W; Larson, Rebekka A; Hollander, David J

2015-01-01

Sediment cores were collected from three sites (1000-1200 m water depth) in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH) event (April-July 2010, 1500 m water depth). Short-lived radioisotope geochronologies (²¹⁰Pb, ²³⁴Th), organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80-93%). This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR) in the surface 10 mm relative to the down-core mean in all benthic foraminifera, including the dominant genera (Bulimina spp., Uvigerina spp., and Cibicidoides spp.). Cores collected in February 2011 documented a site-specific response. There was evidence of a recovery in the benthic foraminiferal density and BFAR at the site closest to the wellhead (45 NM, NE). However, the site farther afield (60 NM, NE) recorded a continued decline in benthic foraminiferal density and BFAR down to near-zero values. This decline in benthic foraminiferal density occurred simultaneously with abrupt increases in sedimentary accumulation rates, polycyclic aromatic hydrocarbon (PAH) concentrations, and changes in redox conditions. Persistent reducing conditions (as many as 10 months after the event) in the surface of these core records were a possible cause of the decline. Another possible cause was the increase (2-3 times background) in PAH's, which are known to cause benthic foraminifera mortality and inhibit reproduction. Records of benthic foraminiferal density coupled with short-lived radionuclide geochronology and organic geochemistry were effective in quantifying the benthic response and will continue to be a valuable tool in determining the long-term effects of the DWH event on a larger spatial scale.

A Decline in Benthic Foraminifera following the Deepwater Horizon Event in the Northeastern Gulf of Mexico

PubMed Central

Schwing, Patrick T.; Romero, Isabel C.; Brooks, Gregg R.; Hastings, David W.; Larson, Rebekka A.; Hollander, David J.

2015-01-01

Sediment cores were collected from three sites (1000–1200 m water depth) in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH) event (April-July 2010, 1500 m water depth). Short-lived radioisotope geochronologies (210Pb, 234Th), organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80–93%). This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR) in the surface 10 mm relative to the down-core mean in all benthic foraminifera, including the dominant genera (Bulimina spp., Uvigerina spp., and Cibicidoides spp.). Cores collected in February 2011 documented a site-specific response. There was evidence of a recovery in the benthic foraminiferal density and BFAR at the site closest to the wellhead (45 NM, NE). However, the site farther afield (60 NM, NE) recorded a continued decline in benthic foraminiferal density and BFAR down to near-zero values. This decline in benthic foraminiferal density occurred simultaneously with abrupt increases in sedimentary accumulation rates, polycyclic aromatic hydrocarbon (PAH) concentrations, and changes in redox conditions. Persistent reducing conditions (as many as 10 months after the event) in the surface of these core records were a possible cause of the decline. Another possible cause was the increase (2–3 times background) in PAH’s, which are known to cause benthic foraminifera mortality and inhibit reproduction. Records of benthic foraminiferal density coupled with short-lived radionuclide geochronology and organic geochemistry were effective in quantifying the benthic response and will continue to be a valuable tool in determining the long-term effects of the DWH event on a larger spatial scale. PMID:25785988

Peltier-based cloud chamber

NASA Astrophysics Data System (ADS)

Nar, Sevda Yeliz; Cakir, Altan

2018-02-01

Particles produced by nuclear decay, cosmic radiation and reactions can be identified through various methods. One of these methods that has been effective in the last century is the cloud chamber. The chamber makes visible cosmic particles that we are exposed to radiation per second. Diffusion cloud chamber is a kind of cloud chamber that is cooled by dry ice. This traditional model has some application difficulties. In this work, Peltier-based cloud chamber cooled by thermoelectric modules is studied. The new model provided uniformly cooled base of the chamber, moreover, it has longer lifetime than the traditional chamber in terms of observation time. This gain has reduced the costs which spent each time for cosmic particle observation. The chamber is an easy-to-use system according to traditional diffusion cloud chamber. The new model is portable, easier to make, and can be used in the nuclear physics experiments. In addition, it would be very useful to observe Muons which are the direct evidence for Lorentz contraction and time expansion predicted by Einsteins special relativity principle.

Plant growth chamber based on space proven controlled environment technology

NASA Astrophysics Data System (ADS)

Ignatius, Ronald W.; Ignatius, Matt H.; Imberti, Henry J.

1997-01-01

Quantum Devices, Inc., in conjunction with Percival Scientific, Inc., and the Wisconsin Center for Space Automation and Robotics (WCSAR) have developed a controlled environment plant growth chamber for terrestrial agricultural and scientific applications. This chamber incorporates controlled environment technology used in the WCSAR ASTROCULTURE™ flight unit for conducting plant research on the Space Shuttle. The new chamber, termed CERES 2010, features air humidity, temperature, and carbon dioxide control, an atmospheric contaminant removal unit, an LED lighting system, and a water and nutrient delivery system. The advanced environment control technology used in this chamber will increase the reliability and repeatability of environmental physiology data derived from plant experiments conducted in this chamber.

Analysis of the Radiated Field in an Electromagnetic Reverberation Chamber as an Upset-Inducing Stimulus for Digital Systems

NASA Technical Reports Server (NTRS)

Torres-Pomales, Wilfredo

2012-01-01

Preliminary data analysis for a physical fault injection experiment of a digital system exposed to High Intensity Radiated Fields (HIRF) in an electromagnetic reverberation chamber suggests a direct causal relation between the time profile of the field strength amplitude in the chamber and the severity of observed effects at the outputs of the radiated system. This report presents an analysis of the field strength modulation induced by the movement of the field stirrers in the reverberation chamber. The analysis is framed as a characterization of the discrete features of the field strength waveform responsible for the faults experienced by a radiated digital system. The results presented here will serve as a basis to refine the approach for a detailed analysis of HIRF-induced upsets observed during the radiation experiment. This work offers a novel perspective into the use of an electromagnetic reverberation chamber to generate upset-inducing stimuli for the study of fault effects in digital systems.

Effect of semen preparation on casa motility results in cryopreserved bull spermatozoa.

PubMed

Contri, Alberto; Valorz, Claudio; Faustini, Massimo; Wegher, Laura; Carluccio, Augusto

2010-08-01

Computer-assisted sperm analyzers (CASA) have become the standard tool for evaluating sperm motility and kinetic patterns because they provide objective data for thousands of sperm tracks. However, these devices are not ready-to-use and standardization of analytical practices is a fundamental requirement. In this study, we evaluated the effects of some settings, such as frame rate and frames per field, chamber and time of analysis, and samples preparations, including thawing temperature, sperm sample concentration, and media used for dilution, on the kinetic results of bovine frozen-thawed semen using a CASA. In Experiment 1, the frame rate (30-60 frame/s) significantly affected motility parameters, whereas the number of frames per field (30 or 45) did not seem to affect sperm kinetics. In Experiment 2, the thawing protocol affects sperm motility and kinetic parameters. Sperm sample concentration significantly limited the opportunity to perform the analysis and the kinetic results. A concentration of 100 and 50 x 10(6) sperm/mL limited the device's ability to perform the analysis or gave wrong results, whereas 5, 10, 20, and 30 x 10(6) sperm/mL concentrations allowed the analysis to be performed, but with different results (Experiment 3). The medium used for the dilution of the sample, which is fundamental for a correct sperm head detection, affects sperm motility results (Experiment 4). In this study, Makler and Leja chambers were used to perform the semen analysis with CASA devices. The chamber used significantly affected motility results (Experiment 5). The time between chamber loading and analysis affected sperm velocities, regardless of chamber used. Based on results recorded in this study, we propose that the CASA evaluation of motility of bovine frozen-thawed semen using Hamilton-Thorne IVOS 12.3 should be performed using a frame rate of 60 frame/s and 30 frames per field. Semen should be diluted at least at 20 x 10(6) sperm/mL using PBS. Furthermore, it is necessary to consider the type of chamber used and perform the analysis within 1 or 2 min, regardless of the chamber used. Copyright 2010 Elsevier Inc. All rights reserved.

Time Perception and the Experience of Time When Immersed in an Altered Sensory Environment.

PubMed

Glicksohn, Joseph; Berkovich-Ohana, Aviva; Mauro, Federica; Ben-Soussan, Tal D

2017-01-01

The notion that exposure to a monotonous sensory environment could elicit reports indicating aberrant subjective experience and altered time perception is the impetus for the present report. Research has looked at the influence of exposure to such environments on time perception, reporting that the greater the environmental variation, the shorter is the time estimation obtained by the method of production. Most conditions for creating an altered sensory environment, however, have not facilitated an immersive experience, one that directly impacts both time perception and subjective experience. In this study, we invited our participants to enter a whole-body altered sensory environment for a 20-min session, wherein they were asked to relax without falling asleep. The session included white-colored illumination of the chamber with eyes closed (5 min), followed by 10 min of illuminating the room with color, after which a short report of subjective experience was collected using a brief questionnaire; this was followed by an additional 5 min of immersion in white light with closed eyes. The participants were then interviewed regarding their subjective experience, including their experience of time within the chamber. Prior to entering the chamber, the participants completed a time-production (TP) task. One group of participants then repeated the task within the chamber, at the end of the session; a second group of participants repeated the task after exiting the chamber. We shall report on changes in TP, and present data indicating that when produced time is plotted as a function of target duration, using a log-log plot, the major influence of sensory environment is on the intercept of the psychophysical function. We shall further present data indicating that for those participants reporting a marked change in time experience, such as "the sensation of time disappeared," their TP data could not be linearized using a log-log plot, hence indicating that for these individuals there might be a "break" in the psychophysical function.

Combustion Integrated Rack (CIR)

NASA Image and Video Library

2016-06-22

NASA Glenn engineer Chris Mroczka installs a gas-jet burner in a chamber within the center’s Combustion Integrated Rack. This chamber is where scientists conduct gaseous combustion experiments in a zero gravity environment.

Plasma chamber testing of advanced photovoltaic solar array coupons

NASA Technical Reports Server (NTRS)

Hillard, G. Barry

1994-01-01

The solar array module plasma interactions experiment is a space shuttle experiment designed to investigate and quantify the high voltage plasma interactions. One of the objectives of the experiment is to test the performance of the Advanced Photovoltaic Solar Array (APSA). The material properties of array blanket are also studied as electric insulators for APSA arrays in high voltage conditions. Three twelve cell prototype coupons of silicon cells were constructed and tested in a space simulation chamber.

Prevention of Over-Pressurization During Combustion in a Sealed Chamber

NASA Technical Reports Server (NTRS)

Gokoglu, Suleyman A.; Niehaus, Justin E.; Olson, Sandra L.; Dietrich, Daniel L.; Ruff, Gary A.; Johnston, Michael C.

2012-01-01

The combustion of flammable material in a sealed chamber invariably leads to an initial pressure rise in the volume. The pressure rise is due to the increase in the total number of gaseous moles (condensed fuel plus chamber oxygen combining to form gaseous carbon dioxide and water vapor) and, most importantly, the temperature rise of the gas in the chamber. Though the rise in temperature and pressure would reduce with time after flame extinguishment due to the absorption of heat by the walls and contents of the sealed spacecraft, the initial pressure rise from a fire, if large enough, could lead to a vehicle over-pressure and the release of gas through the pressure relief valve. This paper presents a simple lumped-parameter model of the pressure rise in a sealed chamber resulting from the heat release during combustion. The transient model considers the increase in gaseous moles due to combustion, and heat transfer to the chamber walls by convection and radiation and to the fuel-sample holder by conduction, as a function of the burning rate of the material. The results of the model are compared to the pressure rise in an experimental chamber during flame spread tests as well as to the pressure falloff after flame extinguishment. The experiments involve flame spread over thin solid fuel samples. Estimates of the heat release rate profiles for input to the model come from the assumed stoichiometric burning of the fuel along with the observed flame spread behavior. The sensitivity of the model to predict maximum chamber pressure is determined with respect to the uncertainties in input parameters. Model predictions are also presented for the pressure profile anticipated in the Fire Safety-1 experiment, a material flammability and fire safety experiment proposed for the European Space Agency (ESA) Automated Transfer Vehicle (ATV). Computations are done for a range of scenarios including various initial pressures and sample sizes. Based on these results, various mitigation approaches are suggested to prevent vehicle over-pressurization and help guide the definition of the space experiment.

Planetary stations and Abyssal Benthic Laboratories: An overview of parallel approaches for long-term investigation in extreme environments

NASA Technical Reports Server (NTRS)

Dipippo, S.; Prendin, W.; Gasparoni, F.

1994-01-01

In spite of the apparent great differences between deep ocean and space environment, significant similarities can be recognized when considering the possible solutions and technologies enabling the development of remote automatic stations supporting the execution of scientific activities. In this sense it is believed that mutual benefits shall be derived from the exchange of experiences and results between people and organizations involved in research and engineering activities for hostile environments, such as space, deep sea, and polar areas. A significant example of possible technology transfer and common systematic approach is given, which describes in some detail how the solutions and the enabling technologies identified for an Abyssal Benthic Laboratory can be applied for the case of a lunar or planetary station.

False Context Fear Memory in Rats

ERIC Educational Resources Information Center

Bae, Sarah; Holmes, Nathan M.; Westbrook, R. Frederick

2015-01-01

Four experiments used rats to study false context fear memories. In Experiment 1, rats were pre-exposed to a distinctive chamber (context A) or to a control environment (context C), shocked after a delay in a second chamber (context B) and tested either in B or A. Rats pre-exposed to A froze just as much as control rats in B but more than control…

T-Violation experiment using polarized Li-8 at TRIUMF

NASA Astrophysics Data System (ADS)

Murata, Jiro; MTV Collaboration

2014-09-01

The MTV experiment searching T-Violating electron transverse polarization in polarized nuclear beta decay at TRIUMF is running. The main electron tracking detector as a Mott polarimeter was upgraded from a planer drift chamber to a cylindrical drift chamber (CDC), which has been commissioned and tested. In this talk, preparation status of the next physics production using the CDC will be presented.

Microgravity

NASA Image and Video Library

2004-04-15

Structure Of Flame Balls At Low Lewis-numbers (SOFBALL) Experiment Mounting Structure (EMS) was used to conduct the SOFBALL experiment on Combustion Module-1. The EMS was inserted into the CM-1 combustion chamber. The chamber was filled with a lean fuel/oxidizer mixture and a spark igniter on the EMS ignited the gas. Very small, weak flames, in the shape of spheres, were formed and studied.

Spectra, composition, and interactions of nuclei above 10 TeV using magnet-interferometric chambers

NASA Technical Reports Server (NTRS)

Gregory, J. C.; Takahashi, Y.

1991-01-01

Although the SCIN-MAGIC experiment has, like all ASTROMAG and most other Attached Payload experiments, been 'deselected' from Space Station, it is expected that ultimately such emulsion chambers will be flown on the Station. Some brief studies are described which were made in support of the design efforts for such a program being conducted at NASA Marshall.

Impact of chamber wall loss of gaseous organic compounds on secondary organic aerosol formation: Explicit modeling of SOA formation from alkane and alkene oxidation

DOE PAGES

La, Y. S.; Camredon, M.; Ziemann, P. J.; ...

2016-02-08

Recent studies have shown that low volatility gas-phase species can be lost onto the smog chamber wall surfaces. Although this loss of organic vapors to walls could be substantial during experiments, its effect on secondary organic aerosol (SOA) formation has not been well characterized and quantified yet. Here the potential impact of chamber walls on the loss of gaseous organic species and SOA formation has been explored using the Generator for Explicit Chemistry and Kinetics of the Organics in the Atmosphere (GECKO-A) modeling tool, which explicitly represents SOA formation and gas–wall partitioning. The model was compared with 41 smog chambermore » experiments of SOA formation under OH oxidation of alkane and alkene series (linear, cyclic and C 12-branched alkanes and terminal, internal and 2-methyl alkenes with 7 to 17 carbon atoms) under high NO x conditions. Simulated trends match observed trends within and between homologous series. The loss of organic vapors to the chamber walls is found to affect SOA yields as well as the composition of the gas and the particle phases. Simulated distributions of the species in various phases suggest that nitrates, hydroxynitrates and carbonylesters could substantially be lost onto walls. The extent of this process depends on the rate of gas–wall mass transfer, the vapor pressure of the species and the duration of the experiments. Furthermore, this work suggests that SOA yields inferred from chamber experiments could be underestimated up a factor of 2 due to the loss of organic vapors to chamber walls.« less

Crystalline heterogeneities and instabilities in thermally convecting magma chamber

NASA Astrophysics Data System (ADS)

Culha, C.; Suckale, J.; Qin, Z.

2016-12-01

A volcanic vent can supply different densities of crystals over an eruption time period. This has been seen in Hawai'i's Kilauea Iki 1959 eruption; however it is not common for all Kilauea or basaltic eruptions. We ask the question: Under what conditions can homogenous magma chamber cultivate crystalline heterogeneities? In some laboratory experiments and numerical simulations, a horizontal variation is observed. The region where crystals reside is identified as a retention zone: convection velocity balances settling velocity. Simulations and experiments that observe retention zones assume crystals do not alter the convection in the fluid. However, a comparison of experiments and simulations of convecting magma with crystals suggest that large crystal volume densities and crystal sizes alter fluid flow considerably. We introduce a computational method that fully resolves the crystalline phase. To simulate basaltic magma chambers in thermal convection, we built a numerical solver of the Navier-Stoke's equation, continuity equation, and energy equation. The modeled magma is assumed to be a viscous, incompressible fluid with a liquid and solid phase. Crystals are spherical, rigid bodies. We create Rayleigh-Taylor instability through a cool top layer and hot bottom layer and update magma density while keeping crystal temperature and size constant. Our method provides a detailed picture of magma chambers, which we compare to other models and experiments to identify when and how crystals alter magma chamber convection. Alterations include stratification, differential settling and instabilities. These characteristics are dependent on viscosity, convection vigor, crystal volume density and crystal characteristics. We reveal that a volumetric crystal density variation may occur over an eruption time period, if right conditions are met to form stratifications and instabilities in magma chambers. These conditions are realistic for Kilauea Iki's 1959 eruption.

Long-term recovery of a Mountain Stream from Clearcut Logging: The Effects of Forest Succession on Benthic Invertebrate Community Structure

Treesearch

Michael K. Stone; J. Bruce Wallace

1998-01-01

Summary1. Changes in benthic invertebrate community structure following 16 years of forest succession after logging were examined by estimating benthic invertebrate abundance, biomass and secondary production in streams draining a forested reference and a recovering clear-cut catchment. Benthic invertebrate abundance was three times higher,...

Pre-launch simulation experiment of microwave-ionosphere nonlinear interaction rocket experiment in the space plasma chamber

NASA Astrophysics Data System (ADS)

Kaya, N.; Tsutsui, M.; Matsumoto, H.; Kimura, I.

1980-09-01

A pre-flight test experiment of a microwave-ionosphere nonlinear interaction rocket experiment (MINIX) has been carried out in a space plasma simulation chamber. Though the first rocket experiment ended up in failure because of a high voltage trouble, interesting results are observed in the pre-flight experiment. A significant microwave heating of plasma up to 300% temperature increase is observed. Strong excitations of plasma waves by the transmitted microwaves in the VLF and HF range are observed as well. These microwave effects may have to be taken into account in solar power satellite projects in the future.

Exploring local adaptation and the ocean acidification seascape - studies in the California Current Large Marine Ecosystem

NASA Astrophysics Data System (ADS)

Hofmann, G. E.; Evans, T. G.; Kelly, M. W.; Padilla-Gamiño, J. L.; Blanchette, C. A.; Washburn, L.; Chan, F.; McManus, M. A.; Menge, B. A.; Gaylord, B.; Hill, T. M.; Sanford, E.; LaVigne, M.; Rose, J. M.; Kapsenberg, L.; Dutton, J. M.

2013-07-01

The California Current Large Marine Ecosystem (CCLME), a temperate marine region dominated by episodic upwelling, is predicted to experience rapid environmental change in the future due to ocean acidification. Aragonite saturation state within the California Current System is predicted to decrease in the future, with near-permanent undersaturation conditions expected by the year 2050. Thus, the CCLME is a critical region to study due to the rapid rate of environmental change that resident organisms will experience and because of the economic and societal value of this coastal region. Recent efforts by a research consortium - the Ocean Margin Ecosystems Group for Acidification Studies (OMEGAS) - has begun to characterize a portion of the CCLME; both describing the mosaic of pH in coastal waters and examining the responses of key calcification-dependent benthic marine organisms to natural variation in pH and to changes in carbonate chemistry that are expected in the coming decades. In this review, we present the OMEGAS strategy of co-locating sensors and oceanographic observations with biological studies on benthic marine invertebrates, specifically measurements of functional traits such as calcification-related processes and genetic variation in populations that are locally adapted to conditions in a particular region of the coast. Highlighted in this contribution are (1) the OMEGAS sensor network that spans the west coast of the US from central Oregon to southern California, (2) initial findings of the carbonate chemistry amongst the OMEGAS study sites, (3) an overview of the biological data that describes the acclimatization and the adaptation capacity of key benthic marine invertebrates within the CCLME.

Indicators: Benthic Macroinvertebrates

EPA Pesticide Factsheets

Benthic (meaning “bottom-dwelling”) macroinvertebrates are small aquatic animals and the aquatic larval stages of insects. Benthic macroinvertebrates are commonly used as indicators of the biological condition of waterbodies.

Processing scalar implicature: a Constraint-Based approach

PubMed Central

Degen, Judith; Tanenhaus, Michael K.

2014-01-01

Three experiments investigated the processing of the implicature associated with some using a “gumball paradigm”. On each trial participants saw an image of a gumball machine with an upper chamber with 13 gumballs and an empty lower chamber. Gumballs then dropped to the lower chamber and participants evaluated statements, such as “You got some of the gumballs”. Experiment 1 established that some is less natural for reference to small sets (1, 2 and 3 of the 13 gumballs) and unpartitioned sets (all 13 gumballs) compared to intermediate sets (6–8). Partitive some of was less natural than simple some when used with the unpartitioned set. In Experiment 2, including exact number descriptions lowered naturalness ratings for some with small sets but not for intermediate size sets and the unpartitioned set. In Experiment 3 the naturalness ratings from Experiment 2 predicted response times. The results are interpreted as evidence for a Constraint-Based account of scalar implicature processing and against both two-stage, Literal-First models and pragmatic Default models. PMID:25265993

A Lab Assembled Microcontroller-Based Sensor Module for Continuous Oxygen Measurement in Portable Hypoxia Chambers

PubMed Central

Mathupala, Saroj P.; Kiousis, Sam; Szerlip, Nicholas J.

2016-01-01

Background Hypoxia-based cell culture experiments are routine and essential components of in vitro cancer research. Most laboratories use low-cost portable modular chambers to achieve hypoxic conditions for cell cultures, where the sealed chambers are purged with a gas mixture of preset O2 concentration. Studies are conducted under the assumption that hypoxia remains unaltered throughout the 48 to 72 hour duration of such experiments. Since these chambers lack any sensor or detection system to monitor gas-phase O2, the cell-based data tend to be non-uniform due to the ad hoc nature of the experimental setup. Methodology With the availability of low-cost open-source microcontroller-based electronic project kits, it is now possible for researchers to program these with easy-to-use software, link them to sensors, and place them in basic scientific apparatus to monitor and record experimental parameters. We report here the design and construction of a small-footprint kit for continuous measurement and recording of O2 concentration in modular hypoxia chambers. The low-cost assembly (US$135) consists of an Arduino-based microcontroller, data-logging freeware, and a factory pre-calibrated miniature O2 sensor. A small, intuitive software program was written by the authors to control the data input and output. The basic nature of the kit will enable any student in biology with minimal experience in hobby-electronics to assemble the system and edit the program parameters to suit individual experimental conditions. Results/Conclusions We show the kit’s utility and stability of data output via a series of hypoxia experiments. The studies also demonstrated the critical need to monitor and adjust gas-phase O2 concentration during hypoxia-based experiments to prevent experimental errors or failure due to partial loss of hypoxia. Thus, incorporating the sensor-microcontroller module to a portable hypoxia chamber provides a researcher a capability that was previously available only to labs with access to sophisticated (and expensive) cell culture incubators. PMID:26862760

A Lab Assembled Microcontroller-Based Sensor Module for Continuous Oxygen Measurement in Portable Hypoxia Chambers.

PubMed

Mathupala, Saroj P; Kiousis, Sam; Szerlip, Nicholas J

2016-01-01

Hypoxia-based cell culture experiments are routine and essential components of in vitro cancer research. Most laboratories use low-cost portable modular chambers to achieve hypoxic conditions for cell cultures, where the sealed chambers are purged with a gas mixture of preset O2 concentration. Studies are conducted under the assumption that hypoxia remains unaltered throughout the 48 to 72 hour duration of such experiments. Since these chambers lack any sensor or detection system to monitor gas-phase O2, the cell-based data tend to be non-uniform due to the ad hoc nature of the experimental setup. With the availability of low-cost open-source microcontroller-based electronic project kits, it is now possible for researchers to program these with easy-to-use software, link them to sensors, and place them in basic scientific apparatus to monitor and record experimental parameters. We report here the design and construction of a small-footprint kit for continuous measurement and recording of O2 concentration in modular hypoxia chambers. The low-cost assembly (US$135) consists of an Arduino-based microcontroller, data-logging freeware, and a factory pre-calibrated miniature O2 sensor. A small, intuitive software program was written by the authors to control the data input and output. The basic nature of the kit will enable any student in biology with minimal experience in hobby-electronics to assemble the system and edit the program parameters to suit individual experimental conditions. We show the kit's utility and stability of data output via a series of hypoxia experiments. The studies also demonstrated the critical need to monitor and adjust gas-phase O2 concentration during hypoxia-based experiments to prevent experimental errors or failure due to partial loss of hypoxia. Thus, incorporating the sensor-microcontroller module to a portable hypoxia chamber provides a researcher a capability that was previously available only to labs with access to sophisticated (and expensive) cell culture incubators.

A new plant chamber facility, PLUS, coupled to the atmosphere simulation chamber SAPHIR

NASA Astrophysics Data System (ADS)

Hohaus, T.; Kuhn, U.; Andres, S.; Kaminski, M.; Rohrer, F.; Tillmann, R.; Wahner, A.; Wegener, R.; Yu, Z.; Kiendler-Scharr, A.

2016-03-01

A new PLant chamber Unit for Simulation (PLUS) for use with the atmosphere simulation chamber SAPHIR (Simulation of Atmospheric PHotochemistry In a large Reaction Chamber) has been built and characterized at the Forschungszentrum Jülich GmbH, Germany. The PLUS chamber is an environmentally controlled flow-through plant chamber. Inside PLUS the natural blend of biogenic emissions of trees is mixed with synthetic air and transferred to the SAPHIR chamber, where the atmospheric chemistry and the impact of biogenic volatile organic compounds (BVOCs) can be studied in detail. In PLUS all important environmental parameters (e.g., temperature, photosynthetically active radiation (PAR), soil relative humidity (RH)) are well controlled. The gas exchange volume of 9.32 m3 which encloses the stem and the leaves of the plants is constructed such that gases are exposed to only fluorinated ethylene propylene (FEP) Teflon film and other Teflon surfaces to minimize any potential losses of BVOCs in the chamber. Solar radiation is simulated using 15 light-emitting diode (LED) panels, which have an emission strength up to 800 µmol m-2 s-1. Results of the initial characterization experiments are presented in detail. Background concentrations, mixing inside the gas exchange volume, and transfer rate of volatile organic compounds (VOCs) through PLUS under different humidity conditions are explored. Typical plant characteristics such as light- and temperature- dependent BVOC emissions are studied using six Quercus ilex trees and compared to previous studies. Results of an initial ozonolysis experiment of BVOC emissions from Quercus ilex at typical atmospheric concentrations inside SAPHIR are presented to demonstrate a typical experimental setup and the utility of the newly added plant chamber.

SUMO Chamber Conditions

DOE Data Explorer

Sevanto, Sanna [Los Alamos National Laboratory; Powers, Heath [Los Alamos National Laboratory; Dickman, Turin L. [Los Alamos National Laboratory; Collins, Adam [Los Alamos National Laboratory; Grossiord, Charlotte [Swiss Federal Institute for Forest Snow and Landscape Research; Adams, Henry [Oklahoma State University; Borrego, Isaac [USGS Southwest Biological Science Center; McDowell, Nate [Pacific Northwest National Laboratory (PNNL); Stockton, Elizabeth [University of New Mexico; Ryan, Max [Los Alamos National Laboratory; Slentz, Matthew [Mohle Adams; Briggs, Sam [Fossil Creek Nursery; McBranch, Natalie [Los Alamos National Laboratory; Morgan, Bryn [Los Alamos National Laboratory

2018-01-01

The Los Alamos Survival–Mortality experiment (SUMO) is located on Frijoles Mesa near Los Alamos, New Mexico, USA, at an elevation of 2150 m. This was a tree manipulation study that investigated the relative impacts of drought and warming on plant function and reveals how trees adapt to drought and heat in semi-arid regions. The study factored the role of tree hydraulic acclimation to both precipitation and temperature and separated their effects.The experiment is located in a pinon-juniper woodland near the ponderosa pine (Pinus ponderosa) forest ecotone. Chamber conditions (temperature, relative humidity, vapor pressure deficit) for SUMO Open Top Chambers (OTCs) used to control air temperatures surrounding heated and control chamber trees. See SUMO Target Tree Information data package (doi:10.15485/1440544) for additional information. Data released by Los Alamos National Lab for public use under LA-UR-18-23656.

Atmospheric turbulence chamber for optical transmission experiment Characterization by thermal method

NASA Technical Reports Server (NTRS)

Gamo, H.; Majumdar, A. K.

1978-01-01

Consideration is given to an atmospheric turbulence chamber designed for optical wave propagation experiments. The chamber consists of ten small electric heater/blowers with an aluminum foil screen and three screens of 2-mm aluminum wire meshes. Calculations are made of the temperature structure constant squared on the basis of temperature structure function measurements derived from a differential microthermocouple system. Values are presented for the refractive-index structure constant squared. The average wind velocity and temperature are found to be, respectively, 0.41 m/sec and 53 C. The inner and outer scales of turbulence are 5.0 mm and 6.5 cm. It is shown that the measured temperature structure function and the power spectrum of temperature fluctuations satisfy, respectively, the 2/3 and -5/3 power similarity laws in the inertial subrange. Possible chamber improvements are discussed.

A critical comparison of different approaches to sediment-quality assessments in the Santos Estuarine System in Brazil.

PubMed

Torres, Ronaldo J; Cesar, Augusto; Pastor, Victor A; Pereira, Camilo D S; Choueri, Rodrigo B; Cortez, Fernando S; Morais, Rodofley D; Abessa, Denis M S; do Nascimento, Marcos R L; Morais, Cassia R; Fadini, Pedro S; Casillas, Tomas A Del Valls; Mozeto, Antônio A

2015-01-01

This study focuses on the discussion of different lines of evidence (LoEs) applied to a sediment-quality assessment that considered the following: chemical concentrations of metals; polycyclic aromatic hydrocarbons (PAHs) in estuarine waters, sediments, and oysters (native and caged Crassostrea brasiliana); PAHs in semipermeable membrane devices (SPMDs); simultaneously extracted metals-acid volatile sulfides (SEM-AVS); benthic community assessment (the exploratory benthic index and the relative benthic index); chronic toxicity tests with the sea urchin Lytechinus variegatus; and bioaccumulation models. Significantly contaminated sediments from the Santos Estuarine System and the consequent toxicity of tested organisms were measured. Caged oysters presented bioaccumulation rates ≤2,500% of total PAH content and 200% of metal content when compared with control organisms from an uncontaminated area. SPMD results presented the same bioaccumulation pattern as caged oysters but at lower concentrations. Benthic communities presented some alterations, and there was a predominance of tolerant species in the inner part of the estuary. According to the SEM-AVS approach, metals should be assumed to be nonbioavailable, but experiments with transplanted C. brasiliana showed metal bioaccumulation, particularly in the cases of chromium, copper, mercury, and zinc. The weight-of-evidence approach was applied to compare and harmonize LoEs commonly used in sediment-quality assessments and to then classify estuary environments according to both their potential for having adverse effects on the biota and their possible ecological risks. All of the results of these approaches (except for SEM-AVS) were found to complement each other.

Characterizing the role benthos plays in large coastal seas and estuaries: A modular approach

USGS Publications Warehouse

Tenore, K.R.; Zajac, R.N.; Terwin, J.; Andrade, F.; Blanton, J.; Boynton, W.; Carey, D.; Diaz, R.; Holland, Austin F.; Lopez-Jamar, E.; Montagna, P.; Nichols, F.; Rosenberg, R.; Queiroga, H.; Sprung, M.; Whitlatch, R.B.

2006-01-01

Ecologists studying coastal and estuarine benthic communities have long taken a macroecological view, by relating benthic community patterns to environmental factors across several spatial scales. Although many general ecological patterns have been established, often a significant amount of the spatial and temporal variation in soft-sediment communities within and among systems remains unexplained. Here we propose a framework that may aid in unraveling the complex influence of environmental factors associated with the different components of coastal systems (i.e. the terrestrial and benthic landscapes, and the hydrological seascape) on benthic communities, and use this information to assess the role played by benthos in coastal ecosystems. A primary component of the approach is the recognition of system modules (e.g. marshes, dendritic systems, tidal rivers, enclosed basins, open bays, lagoons). The modules may differentially interact with key forcing functions (e.g. temperature, salinity, currents) that influence system processes and in turn benthic responses and functions. Modules may also constrain benthic characteristics and related processes within certain ecological boundaries and help explain their overall spatio-temporal variation. We present an example of how benthic community characteristics are related to the modular structure of 14 coastal seas and estuaries, and show that benthic functional group composition is significantly related to the modular structure of these systems. We also propose a framework for exploring the role of benthic communities in coastal systems using this modular approach and offer predictions of how benthic communities may vary depending on the modular composition and characteristics of a coastal system. ?? 2006 Elsevier B.V. All rights reserved.

Chamber transport for heavy ion fusion

NASA Astrophysics Data System (ADS)

Olson, Craig L.

2014-01-01

A brief review is given of research on chamber transport for HIF (heavy ion fusion) dating from the first HIF Workshop in 1976 to the present. Chamber transport modes are categorized into ballistic transport modes and channel-like modes. Four major HIF reactor studies are summarized (HIBALL-II, HYLIFE-II, Prometheus-H, OSIRIS), with emphasis on the chamber transport environment. In general, many beams are used to provide the required symmetry and to permit focusing to the required small spots. Target parameters are then discussed, with a summary of the individual heavy ion beam parameters required for HIF. The beam parameters are then classified as to their line charge density and perveance, with special emphasis on the perveance limits for radial space charge spreading, for the space charge limiting current, and for the magnetic (Alfven) limiting current. The major experiments on ballistic transport (SFFE, Sabre beamlets, GAMBLE II, NTX, NDCX) are summarized, with specific reference to the axial electron trapping limit for charge neutralization. The major experiments on channel-like transport (GAMBLE II channel, GAMBLE II self-pinch, LBNL channels, GSI channels) are discussed. The status of current research on HIF chamber transport is summarized, and the value of future NDCX-II transport experiments for the future of HIF is noted.

High vacuum tip-enhanced Raman spectroscope based on a scanning tunneling microscope

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fang, Yurui; Bionanophotonics, Department of Applied Physics, Chalmers University of Technology, Göteborg, SE 41296; Zhang, Zhenglong

2016-03-15

In this paper, we present the construction of a high-vacuum tip-enhanced Raman spectroscopy (HV-TERS) system that allows in situ sample preparation and measurement. A detailed description of the prototype instrument is presented with experimental validation of its use and novel ex situ experimental results using the HV-TERS system. The HV-TERS system includes three chambers held under a 10{sup −7} Pa vacuum. The three chambers are an analysis chamber, a sample preparation chamber, and a fast loading chamber. The analysis chamber is the core chamber and contains a scanning tunneling microscope (STM) and a Raman detector coupled with a 50 ×more » 0.5 numerical aperture objective. The sample preparation chamber is used to produce single-crystalline metal and sub-monolayer molecular films by molecular beam epitaxy. The fast loading chamber allows ex situ preparation of samples for HV-TERS analysis. Atomic resolution can be achieved by the STM on highly ordered pyrolytic graphite. We demonstrate the measurement of localized temperature using the Stokes and anti-Stokes TERS signals from a monolayer of 1,2-benzenedithiol on a gold film using a gold tip. Additionally, plasmonic catalysis can be monitored label-free at the nanoscale using our device. Moreover, the HV-TERS experiments show simultaneously activated infrared and Raman vibrational modes, Fermi resonance, and some other non-linear effects that are not observed in atmospheric TERS experiments. The high spatial and spectral resolution and pure environment of high vacuum are beneficial for basic surface studies.« less

Classification of threespine stickleback along the benthic-limnetic axis.

PubMed

Willacker, James J; von Hippel, Frank A; Wilton, Peter R; Walton, Kelly M

2010-11-01

Many species of fish display morphological divergence between individuals feeding on macroinvertebrates associated with littoral habitats (benthic morphotypes) and individuals feeding on zooplankton in the limnetic zone (limnetic morphotypes). Threespine stickleback (Gasterosteus aculeatus L.) have diverged along the benthic-limnetic axis into allopatric morphotypes in thousands of populations and into sympatric species pairs in several lakes. However, only a few well known populations have been studied because identifying additional populations as either benthic or limnetic requires detailed dietary or observational studies. Here we develop a Fisher's linear discriminant function based on the skull morphology of known benthic and limnetic stickleback populations from the Cook Inlet Basin of Alaska and test the feasibility of using this function to identify other morphologically divergent populations. Benthic and limnetic morphotypes were separable using this technique and of 45 populations classified, three were identified as morphologically extreme (two benthic and one limnetic), nine as moderately divergent (three benthic and six limnetic) and the remaining 33 populations as morphologically intermediate. Classification scores were found to correlate with eye size, the depth profile of lakes, and the presence of invasive northern pike (Esox lucius). This type of classification function provides a means of integrating the complex morphological differences between morphotypes into a single score that reflects the position of a population along the benthic-limnetic axis and can be used to relate that position to other aspects of stickleback biology.

Classification of threespine stickleback along the benthic-limnetic axis

PubMed Central

Willacker, James J.; von Hippel, Frank A.; Wilton, Peter R.; Walton, Kelly M.

2010-01-01

Many species of fish display morphological divergence between individuals feeding on macroinvertebrates associated with littoral habitats (benthic morphotypes) and individuals feeding on zooplankton in the limnetic zone (limnetic morphotypes). Threespine stickleback (Gasterosteus aculeatus L.) have diverged along the benthic-limnetic axis into allopatric morphotypes in thousands of populations and into sympatric species pairs in several lakes. However, only a few well known populations have been studied because identifying additional populations as either benthic or limnetic requires detailed dietary or observational studies. Here we develop a Fisher’s linear discriminant function based on the skull morphology of known benthic and limnetic stickleback populations from the Cook Inlet Basin of Alaska and test the feasibility of using this function to identify other morphologically divergent populations. Benthic and limnetic morphotypes were separable using this technique and of 45 populations classified, three were identified as morphologically extreme (two benthic and one limnetic), nine as moderately divergent (three benthic and six limnetic) and the remaining 33 populations as morphologically intermediate. Classification scores were found to correlate with eye size, the depth profile of lakes, and the presence of invasive northern pike (Esox lucius). This type of classification function provides a means of integrating the complex morphological differences between morphotypes into a single score that reflects the position of a population along the benthic-limnetic axis and can be used to relate that position to other aspects of stickleback biology. PMID:21221422

Benthic macrofaunal structure and secondary production in tropical estuaries on the Eastern Marine Ecoregion of Brazil.

PubMed

Bissoli, Lorena B; Bernardino, Angelo F

2018-01-01

Tropical estuaries are highly productive and support diverse benthic assemblages within mangroves and tidal flats habitats. Determining differences and similarities of benthic assemblages within estuarine habitats and between regional ecosystems may provide scientific support for management of those ecosystems. Here we studied three tropical estuaries in the Eastern Marine Ecoregion of Brazil to assess the spatial variability of benthic assemblages from vegetated (mangroves) and unvegetated (tidal flats) habitats. A nested sampling design was used to determine spatial scales of variability in benthic macrofaunal density, biomass and secondary production. Habitat differences in benthic assemblage composition were evident, with mangrove forests being dominated by annelids (Oligochaeta and Capitellidae) whereas peracarid crustaceans were also abundant on tidal flats. Macrofaunal biomass, density and secondary production also differed between habitats and among estuaries. Those differences were related both to the composition of benthic assemblages and to random spatial variability, underscoring the importance of hierarchical sampling in estuarine ecological studies. Given variable levels of human impacts and predicted climate change effects on tropical estuarine assemblages in Eastern Brazil, our data support the use of benthic secondary production to address long-term changes and improved management of estuaries in Eastern Brazil.

Benthic macrofaunal structure and secondary production in tropical estuaries on the Eastern Marine Ecoregion of Brazil

PubMed Central

Bissoli, Lorena B.

2018-01-01

Tropical estuaries are highly productive and support diverse benthic assemblages within mangroves and tidal flats habitats. Determining differences and similarities of benthic assemblages within estuarine habitats and between regional ecosystems may provide scientific support for management of those ecosystems. Here we studied three tropical estuaries in the Eastern Marine Ecoregion of Brazil to assess the spatial variability of benthic assemblages from vegetated (mangroves) and unvegetated (tidal flats) habitats. A nested sampling design was used to determine spatial scales of variability in benthic macrofaunal density, biomass and secondary production. Habitat differences in benthic assemblage composition were evident, with mangrove forests being dominated by annelids (Oligochaeta and Capitellidae) whereas peracarid crustaceans were also abundant on tidal flats. Macrofaunal biomass, density and secondary production also differed between habitats and among estuaries. Those differences were related both to the composition of benthic assemblages and to random spatial variability, underscoring the importance of hierarchical sampling in estuarine ecological studies. Given variable levels of human impacts and predicted climate change effects on tropical estuarine assemblages in Eastern Brazil, our data support the use of benthic secondary production to address long-term changes and improved management of estuaries in Eastern Brazil. PMID:29507833

A novel design for a dual stable isotope continuous labeling chamber: results on labeling efficiency and C and N allocation in Andropogon gerardii

NASA Astrophysics Data System (ADS)

Soong, J.; Stewart, C.; Reuss, D.; Pinney, C.; Cotrufo, F. M.

2010-12-01

The use of stable isotope enriched plant material can provide an unobstructed method of studying ecosystem nutrient dynamics between plants, soil, and atmosphere. However, the production of uniformly labeled perennial plant material is challenging due to plant physiological constraints and the mechanics of building and operating an isotope labeling system. In this study we present the design of a novel dual 13C and 15N continuous isotope labeling chamber located at Colorado State University. The chamber is equipped with automatic controls for CO2 concentration, temperature, and humidity, and has successfully been used to grow and label the tallgrass perennial Andropogon gerardii in pots from rhizomes. Three different nitrogen fertilization levels were applied to assess how substrate availability may alter growth and overall performance in the system. The efficiency of the 13C and 15N labeling chamber, its design and overall performance, as well as a full C, N, 13C, and 15N budget of the aboveground biomass, belowground biomass, and soil will be presented. Solid samples were analyzed on an EA-IRMS, while air samples from the chamber were analyzed using a precon-GC-IRMS system. The dual stable isotope labeled A. gerardii produced from this chamber will be used in a decomposition experiment to quantify the relative contribution of aboveground litter derived C to soil respiration, dissolved organic carbon, and various soil organic matter pools. Based on the results of our A. gerardii 13C and 15N labeling experiment we believe that this chamber design can be used to successfully produce dual stable isotope labeled plants for a wide variety of terrestrial nutrient flux experiments.

SSCE, Rominger works with middeck experiment

NASA Image and Video Library

1997-08-29

STS085-339-006 (7 - 19 August 1997) --- Astronaut Kent V. Rominger, pilot, checks on the Solid Surface Combustion Experiment (SSCE) on the mid-deck of the Space Shuttle Discovery. The experiment, which occupies the space of four lockers, consists of a Polymethyl Methacrylate (PMMA) fuel sample internally mounted in the center of a pressurized chamber. Two windows orthogonal to each other in the chamber wall allow viewing by a 16mm camera of the side edge and top of the PMMA sample.

Development of a plasma focus neutron source powered by an explosive magnetic generator

NASA Astrophysics Data System (ADS)

Ablesimov, V. E.; Andrianov, A. V.; Bazanov, A. A.; Glybin, A. M.; Dolin, Yu. N.; Drozdov, I. Yu.; Drozdov, Yu. M.; Duday, P. V.; Zimenkov, A. A.; Ivanov, V. A.; Ivanovskii, A. V.; Kalinychev, A. E.; Karpov, G. V.; Kraev, A. I.; Lomtev, S. S.; Nudikov, V. N.; Pak, S. V.; Pozdov, N. I.; Polyushko, S. M.; Rybakov, A. F.; Skobelev, A. N.; Turov, A. N.; Fevralev, A. Yu.

2015-01-01

This paper presents the results of laboratory and explosive experiments with a plasma focus discharge Mather-type chamber at a discharge current amplitude of 1.3-1.4 MA. It has been found that in laboratory experiments, the yield of a deuterium-deuterium neutrons reached 1011, and in an explosive experiment using the chamber filled with a deuterium-tritium gas mixture, the integral yield of a deuterium-tritium neutrons with an energy of 14 MeV was more than 1012 neutrons.

Electrophoretic characterization of aldehyde-fixed red blood cells, kidney cells, lynphocytes and chamber coatings

NASA Technical Reports Server (NTRS)

1976-01-01

Ground-based electrokinetic data on the electrophoresis flight experiment to be flown on the Apollo-Soyuz Test Project experiment MA-011 are stipulated. Aldehyde-fixed red blood cells, embryonic kidney cells and lymphocytes were evaluated by analytical particle electrophoresis. The results which aided in the interpretation of the final analysis of the MA-011 experiment are documented. The electrophoresis chamber surface modifications, the buffer, and the material used in the column system are also discussed.

Na/Ca Ratio in Large Benthic Foraminifera as a Novel Proxy for Past Ocean Calcium

NASA Astrophysics Data System (ADS)

Rosenthal, Y.; Hauzer, H.; Evans, D.; Erez, J.

2017-12-01

Culture experiments with Operculina ammonoides (a large symbiont bearing benthic foraminifer and an extant relative of the Eocene Nummulites) were carried out varying seawater [Ca], temperature and salinity. The main results of these experiments are: 1. Na/Ca in these foraminifera shells varies with the Na/Ca ratio in the seawater 2. Na/Ca shows small, non-systematic variations with temperature (22-28 ºC) that are within our analytical precision. 3. Na/Ca in the shells show very low changes, increasing linearly with salinity. The sensitivity to salinity is very low compared to that caused by changes of Na/Ca in seawater. Over the seawater experimental range of Na/Ca (10-18 mM), a change of 5 ppt salinity induced a slight Na/Ca increase comparable to the analytical error for Na, or that caused by temperature. Initial reconstructions of seawater [Ca], based on these calibrations, generally agree well with previous models and reconstructions confirming that seawater [Ca] concentrations were substantially higher during the early-mid Cenozoic than today.

Some potential errors in the measurement of mercury gas exchange at the soil surface using a dynamic flux chamber.

PubMed

Gillis, A; Miller, D R

2000-10-09

A series of controlled environment experiments were conducted to examine the use of a dynamic flux chamber to measure soil emission and absorption of total gaseous mercury (TGM). Uncertainty about the appropriate airflow rates through the chamber and chamber exposure to ambient wind are shown to be major sources of potential error. Soil surface mercury flux measurements over a range of chamber airflow rates showed a positive linear relationship between flux rates and airflow rate through the chamber. Mercury flux measurements using the chamber in an environmental wind tunnel showed that exposure of the system to ambient winds decreased the measured flux rates by 40% at a wind speed of 1.0 m s(-1) and 90% at a wind speed of 2 m s(-1). Wind tunnel measurements also showed that the chamber footprint was limited to the area of soil inside the chamber and there is little uncertainty of the footprint size in dry soil.

Investigation, comparison and design of chambers used in centrifugal partition chromatography on the basis of flow pattern and separation experiments.

PubMed

Schwienheer, C; Merz, J; Schembecker, G

2015-04-17

In centrifugal partition chromatography (CPC) the separation efficiency is mainly influenced by the hydrodynamic of mobile and stationary phase in the chambers. Thus, the hydrodynamic has to be investigated and understood in order to enhance a CPC separation run. Different chamber geometries have been developed in the past and the influence of several phase systems and CPC operating conditions were investigated for these chambers. However, a direct comparison between the different chamber types has not been performed yet. In order to investigate the direct influence of the chamber design on the hydrodynamic, several chamber designs - partially similar in geometry to commercial available designs - are investigated under standardized conditions in the present study. The results show the influence of geometrical aspects of the chamber design on the hydrodynamic and therewith, on the separation efficiency. As a conclusion of the present study, some ideas for an optimal chamber design for laboratory and industrial purpose are proposed. Copyright © 2015 Elsevier B.V. All rights reserved.

Note: Small anaerobic chamber for optical spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chauvet, Adrien A. P., E-mail: adrien.chauvet@gmail.com; Chergui, Majed; Agarwal, Rachna

2015-10-15

The study of oxygen-sensitive biological samples requires an effective control of the atmosphere in which they are housed. In this aim however, no commercial anaerobic chamber is adequate to solely enclose the sample and small enough to fit in a compact spectroscopic system with which analysis can be performed. Furthermore, spectroscopic analysis requires the probe beam to pass through the whole chamber, introducing a requirement for adequate windows. In response to these challenges, we present a 1 l anaerobic chamber that is suitable for broad-band spectroscopic analysis. This chamber has the advantage of (1) providing access, via a septum, tomore » the sample and (2) allows the sample position to be adjusted while keeping the chamber fixed and hermetic during the experiment.« less

Influence of sediment-organic matter quality on growth and polychlorobiphenyl bioavailability in Echinodermata (Amphiura filiformis)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gunnarsson, J.S.; Granberg, M.E.; Nilsson, H.C.

Sediment total organic carbon (TOC) content is considered to be a primary food source for benthic invertebrates and a major factor influencing the partitioning and bioavailability of sediment-associated organic contaminants. Most studies report that both toxicity and uptake of sediment-associated contaminants by benthic organisms are inversely proportional to sediment TOC content. The aim of this study was to determine the importance of the TOC quality for the bioavailability of sediment-associated organic contaminants and the growth of benthic macrofauna. The common infaunal brittle star Amphiura filiformis was exposed to a base sediment covered by a {sup 14}C-polychlorobipenyl (3,3{prime}4,4{prime}-{sup 14}C-tetrachlorobiphenyl (TCB)) contaminatedmore » top layer (0--2 cm), enriched to the same TOC content with 31 g TOC/m{sup 2} of different quality and origin. The following carbon sources, ranging from labile to refractory, were used: (1) green macroalga (Ulva lactuca), (2) brown macroalga (Ascophyllum nodosum), (3) eelgrass (Zostera Marina), (4) phytoplankton (Ceratium spp.), and (5) lignins of terrestrial origin. Characterization of the organic matter quality was accomplished by measuring the content of amino acids, lipids, C, N, and polyphenolic compounds. The reactivity of the sedimentary organic matter was assessed by means of respiration and dissolved inorganic nitrogen flux measurements. The experiment was carried out in 1-L glass jars, each containing four brittle stars and the contaminated and enriched sediment. The jars were circulated in a flow-through mode with filtered seawater. Somatic growth (regeneration of a precut arm) and bioaccumulation of {sup 14}C-TCB were measured at 10 sampling occasions during 48 d of exposure. Growth rates, TCB uptake rates, and steady-state concentrations differed significantly between treatments and were correlated to the qualities of the organic substrates. The greatest TCB accumulation and growth were observed in treatments with the most labile organic substrates and the lowest accumulation and growth were seen with the most refractory substrates. Results from this experiment suggest that the bioaccumulation of organic contaminants in benthic infauna is dependent on the nutritional quality of the sedimentary organic matter.« less

Benthic Foraminifers identify the source of displaced sediment from a sediment density flow at 1840 m near the Seafloor Instrument Node of the Monterey Coordinated Canyon Experiment

NASA Astrophysics Data System (ADS)

McGann, M.; Maier, K. L.; Gales, J. A.; Paull, C. K.; Gwiazda, R.; Barry, J.; Carvajal, C.; Clare, M. A.; Cartigny, M.; Chaffey, M. R.; Parsons, D. R.; O'Reilly, T. C.; Rosenberger, K. J.; Wolfson-Schwehr, M.; Simmons, S.; Sumner, E.; Talling, P.; Xu, J.

2017-12-01

Submarine canyons are found along the slopes of most continental margins and turbidity currents are thought to be the primary mechanism responsible for transporting sediment through them to deep-sea fans. The initiation sites of these flows are difficult to locate with any degree of precision from lithology alone. Fortunately, the presence of allochthonous microscopic remains, such as benthic foraminifers, can aid in the identification of the source of the displaced sediments. In Monterey Canyon, offshore California, a Seafloor Instrument Node (SIN) and adjacent mooring in the Coordinated Canyon Experiment indicate that a February 2017 turbidity current reached 1840 m water depth. In April 2017, one push core was obtained on each of four sides of the SIN just outside its frame and six others from 30-100 m away. Each was cut into 1 cm slices, stained with rose Bengal, washed, and analyzed for their microscopic constituents. Material recovered included terrestrial debris (wood, leaves, seeds, highway safety spheres, and volcanic glass) as well as foraminiferal tests. Dead benthic foraminifers from the estuarine (0-10 m), inner shelf (0-50 m), outer shelf (50-150 m), slope break (150 m), upper bathyal (150-500 m), and middle bathyal (500-2000 m) biofacies were present, suggesting a staged progression of sediment downslope from the continental shelf and slope. Living (rose Bengal stained) foraminifers recovered represent estuarine (Ammonia tepida, Elphidium excavatum), inner shelf (Buccella frigida, B. tenerrima, Buliminella elegantissima, Cibicides fletcheri, Nonionella spp., Rotorbinella turbinata), and upper bathyal (Bolivina pacifica, B. spissa, Epistominella exigua, Uvigerina peregrina) species as well as an in-situ middle bathyal biofacies (Bolivina argentea, B. spissa, Buliminella tenuata, Epistominella pacifica, Globobulimina spp., Uvigerina peregrina, U. hispida). The presence of living allochthonous benthic foraminifers from these shallower biofacies suggests the flow that covered portions of the SIN frame and the surrounding area originated in the estuarine to shallow shelf environment. Because the shallow water species were still alive when deposited at 1840 m water depth, the sediment gravity flow was a rapid event that transported sediment down canyon to this deep-marine site.

The interaction of light and gravity on the transmission of Echinostoma caproni (Digenea: Echinostomatidae) cercariae to the second intermediate host, Biomphalaria glabrata (Gastropoda: Pulmonata).

PubMed

Platt, Thomas R; Greenlee, Hali; Zelmer, Derek A

2010-04-01

The current experiments were designed to assess the interaction of light and gravity on the transmission of Echinostoma caproni cercariae to the second intermediate host, Biomphalaria glabrata. Transmission chambers were constructed of clear polyvinyl chloride pipe covered with a black sleeve to exclude light. Snails were constrained within the chamber to prevent movement, while permitting the cercariae to swim freely. A trial consisted of 2 infected B. glabrata shedding E. caproni cercariae placed at the center of the chamber with 5 uninfected B. glabrata placed 10 cm above and below the shedding snails as sentinels. Three experiments, consisting of 12 trials each, were conducted under the following lighting conditions, i.e., above and below the transmission chamber, and in complete darkness. In all 3 experiments, the proportion of metacercariae was significantly higher in snails at the top of the chamber. The results suggest that a negative geotaxis is the primary factor in the initial dispersal of E. caproni cercariae. Coupling negative geotaxis and positive phototaxis (light from above) resulted in a significantly higher proportion of metacercariae in sentinel snails at the top of the transmission chamber when corrected for cercarial density. There was no significant difference in the proportion of metacercariae in snails at the top or bottom of the transmission chamber with light at the bottom of the chamber or in complete darkness. Cercariae of E. caproni only respond to light in context, i.e., from above, and ignore the light stimulus when it comes from an unexpected location (bottom of the water column). Significantly greater numbers of cercariae were released from shedding snails when light was present, suggesting that emergence of cercariae from B. glabrata is dependent on light regardless of the position of the light source.

A steady-state continuous flow chamber for the study of daytime and nighttime chemistry under atmospherically relevant NO levels

NASA Astrophysics Data System (ADS)

Zhang, Xuan; Ortega, John; Huang, Yuanlong; Shertz, Stephen; Tyndall, Geoffrey S.; Orlando, John J.

2018-05-01

Experiments performed in laboratory chambers have contributed significantly to the understanding of the fundamental kinetics and mechanisms of the chemical reactions occurring in the atmosphere. Two chemical regimes, classified as high-NO vs. zero-NO conditions, have been extensively studied in previous chamber experiments. Results derived from these two chemical scenarios are widely parameterized in chemical transport models to represent key atmospheric processes in urban and pristine environments. As the anthropogenic NOx emissions in the United States have decreased remarkably in the past few decades, the classic high-NO and zero-NO conditions are no longer applicable to many regions that are constantly impacted by both polluted and background air masses. We present here the development and characterization of the NCAR Atmospheric Simulation Chamber, which is operated in steady-state continuous flow mode for the study of atmospheric chemistry under intermediate NO conditions. This particular chemical regime is characterized by constant sub-ppb levels of NO and can be created in the chamber by precise control of the inflow NO concentration and the ratio of chamber mixing to residence timescales. Over the range of conditions achievable in the chamber, the lifetime of peroxy radicals (RO2), a key intermediate from the atmospheric degradation of volatile organic compounds (VOCs), can be extended to several minutes, and a diverse array of reaction pathways, including unimolecular pathways and bimolecular reactions with NO and HO2, can thus be explored. Characterization experiments under photolytic and dark conditions were performed and, in conjunction with model predictions, provide a basis for interpretation of prevailing atmospheric processes in environments with intertwined biogenic and anthropogenic activities. We demonstrate the proof of concept of the steady-state continuous flow chamber operation through measurements of major first-generation products, methacrolein (MACR) and methyl vinyl ketone (MVK), from OH- and NO3-initiated oxidation of isoprene.

Effects of benthos, temperature, and dose on the fate of hexabromocyclododecane in experimental coastal ecosystems.

PubMed

Bradshaw, Clare; Strid, Anna; von Stedingk, Hans; Gustafsson, Kerstin

2015-06-01

The authors studied the fate of the brominated flame retardant hexabromocyclododecane (HBCDD) added in a particulate suspension to experimental ecosystems assembled from brackish (Baltic Sea) coastal bays. Two experiments examined how benthic macrofauna (over 21 d) and increased temperature (14 d) affected HBCDD concentrations and fractionation of α, β, and γ diastereomers in the water, sediment, and biota. A third experiment run over 3 seasons (231 d), studied the effect of HBCDD dose on the same endpoints. In all treatments of the 3 experiments, HBCDD partitioned mainly to the sediment, and this proportion increased with time. Presence of macrofauna tended to increase the HBCDD concentration in the sediment and decreased its concentration in the water. Increased temperature (+ 5°C) decreased the amount of HBCDD in sediment and water but not in the filter- and deposit-feeding infaunal bivalves (Macoma balthica). The partitioning between water, sediment, and biota was not concentration dependent. In all treatments, sediment became enriched in γ-HBCDD, M. balthica in α-HBCDD, and water in α- and β-HBCDD. Bioaccumulation of HBCDD in M. balthica was high in all experiments (log biota-sediment accumulation factor [BSAF] > 1.25), the α diastereomer contributing the most (log BSAF 2.1-5.2). There is a risk of trophic transfer of HBCDD from benthic to pelagic food webs, as well as secondary poisoning of marine consumers. © 2015 SETAC.

Effects of Benthic Barriers on Macroinvertebrate Communities

DTIC Science & Technology

1993-10-01

Aquatic Plant Control Research Program Effects of Benthic Barriers on Macroinvertebrate Communities by Barry S. Payne, Andrew C. Miller Environmental...Plant Control Technical Report A-93-5Resear h Program Oct ber 1993 Effects of Benthic Barriers on Macroinvertebrate Communities by Barry S. Payne...Effects of benthic barriers on macroinvertebrate communities / by Barry S. Payne, Andrew C. Miller, [and] Thomas Ussery ; prepared for U.S. Army Corps of

The evaluation of Computed Tomography hard- and software tools for micropaleontologic studies on foraminifera

NASA Astrophysics Data System (ADS)

van Loo, D.; Speijer, R.; Masschaele, B.; Dierick, M.; Cnudde, V.; Boone, M.; de Witte, Y.; Dewanckele, J.; van Hoorebeke, L.; Jacobs, P.

2009-04-01

Foraminifera (Forams) are single-celled amoeba-like organisms in the sea, which build a tiny calcareous multi-chambered shell for protection. Their enormous abundance, great variation of shape through time and their presence in all marine deposits made these tiny microfossils the oil companies' best friend by facilitating the detection of new oil wells. Besides the success of forams in the oil and gas industry, they are also a most powerful tool for reconstructing climate change in the past. The shell of a foraminifer is a tiny gold mine of information both geometrical as chemical. However, until recently the best information on this architecture was only obtained through imaging the outside of a shell with Scanning Electron Microscopy (SEM), giving no clues towards internal structures other than single snapshots through breaking a specimen apart. With X-ray computed tomography (CT) it is possible to overcome this problem and uncover a huge amount of geometrical information without destructing the samples. Using the last generation of micro-CT's, called nano-CT, because of the sub-micron resolution, it is now possible to perform adequate imaging even on these tiny samples without needing huge facilities. In this research, a comparison is made between different X-ray sources and X-ray detectors and the resulting image resolution. Both sharpness, noise and contrast are very important parameters that will have important effects on the accuracy of the results and on the speed of data-processing. Combining this tomography technique with specific image processing software, called segmentation, it is possible to obtain a 3D virtual representation of the entire forams shell. This 3D virtual object can then be used for many purposes, from which automatic measurement of the chambers size is one of the most important ones. The segmentation process is a combination of several algorithms that are often used in CT evaluation, in this work an evaluation of those algorithms is presented. Difficulties arising when the forams shell is filled with material but it still remains possible to perform adequate segmentation. The void inside the shell corresponds to the chambers of the foram and the inter-chamber connections. Using automatic separation algorithms it is possible to obtain the shape of individual chambers. The results from the segmentation process can then be used to perform a multitude of analysis on each foram. Out of the shells geometry one can derive variations in shell thickness, shell density and shell porosity. Since the geometry of each individual chamber can be derived, it is possible to track chamber size variation for one foram or between two different forams, the difference in orientation and distance between the chambers. In this work the algorithms and procedures have been applied on two forams: Pseudouvigerina sp., a benthic foram that lived within the sediments at the seafloor. It dates from the earliest Paleocene, 65 Ma and was collected near Brazos River, Texas. Globigerinoides, a modern planktic foram, living in the upper part of the water comlumn in the open ocean. The test settled on the seafloor after death and was recently collected from the seafloor at 2900 m water depth at Nazca Ridge in the eastern Pacific Ocean. It was found that foram A consists of 15 chambers with a total volume of 1.8 x 106 m3 and shows progressive growth of consecutive chambers (average of 1,5 magnification). After the large globular initial chamber, which indicates asexual reproduction, each chamber is slightly larger than the previous one. In the later stages the chambers develop lateral edges with a thickened margin, leading to a distinct triangular shape in cross section. Foram B on the other hand has a distinct trochospiral coil (like a snail), consisting of 16 chambers with a total volume of 91 x 106 m3. The entire shell thickens with every successive chamber, so that the initial part of the test is embraced in a thick calcite crust. The chambers grow rapidly in size (average magnification of 2,24 ), which is typical for most planktic foraminifera. The globular shape aids in the buoyancy of the specimen for its planktic way of life.

Effect of headspace mixing in static chambers and sampling protocol on calculated CH4 fluxes from soils

NASA Astrophysics Data System (ADS)

Juszczak, R.; Pihlatie, M.; Christiansen, J. R.; Giebels, M.; Schreiber, P.; Aaltonen, H.; Korhonen, J.; Rasilo, T.; Chojnicki, B. H.; Urbaniak, M.

2009-04-01

Closed static chambers are often used for greenhouse gas flux measurements from soils. The type of chamber, chamber handling and sampling protocol can influence the measurements. In most cases the calculated fluxes are suspected to be underestimated mainly because of reduction of gas diffusion from the soil to chamber headspace due to changed trace gas concentration gradient. Thus, fans are often applied to obtain better mixing of the air inside the chamber headspace and in turn reduce the negative effect of decreased concentration gradient. The open question is, however, to which extent the fluxes are changed by fans and whether they still remain underestimated or may even be overestimated? On the other hand, different sampling protocols are used assuming that they do not affect the flux measurements. To test different types of static chambers and different sampling procedures applied for measurement of greenhouse gas (CH4 and N2O) fluxes a chamber calibration campaign was organized at Hyytiälä Forestry Field Station in Southern Finland during August-October 2008. The main aim of the campaign was to quantitatively assess the uncertaintities and errors related to static chamber measurements. During this campaign static chambers were tested for 5 different CH4 and N2O flux levels with 3 different soil conditions (moisture and porosity) in a calibration tank described by Pumpanen et al. (2004). Among the different experiments, several special tests were carried out with the closed static chambers. Here, results of two special tests are presented to document whether 1) the air mixing inside the chamber headspace, 2) different sampling procedures influence the CH4 fluxes, and 3) how different calculation methods lead to varying results. Two static chambers of different volumes (65.5 and 195 liters) but with the same circular shape and surface area were connected to a LOS GATOS fats methane analyzer. The CH4 concentration inside the chamber headspace was monitored continuously with 1Hz frequency. Additionally, two different manual samplings procedures were tested and gas samples from chamber headspace were taken for gas chromatograph (GC) and analysed in two different laboratories. Gas concentrations in the calibration tank were monitored with a GC and an automatic gas analyzer (INNOVA). The preliminary results showed that air mixing inside the chamber headspace, the way of chamber handling and sampling procedures could have pronounced influence on the trace gas concentration detection inside a chamber, and as a consequence the calculated chamber fluxes. The moment of chamber enclosure can lead to a rapid increase in CH4 concentration due to a pressure effect in the chambers without a vent tube. Thus, it is essential to critically estimate the time of the first sampling so that it is early enough after chamber enclosure, but not disturbed by the initial chamber handling. It was also observed that manual sampling of gas can change the CH4 concentration in the chamber headspace. When mixing the chamber headspace air by a syringe, the subsequent gas sampling in the syringe may affect the diffusion of gas between the soil and the chamber headspace, and hence affect the calculated fluxes. It was observed that mixing the chamber headspace with a fan instead of syringes, reduced this effect during the chamber enclosure. Overall, fluxes measured with chamber equipped with a fan always gave higher fluxes (up to 40%) as compared to fluxes measured from chambers without a fan. Results of our experiment lead to the assumption that these differences were generally larger the higher the chamber was, the less porous the soil was, and the higher the fluxes were. We conclude from our experiment that static chambers used for greenhouse gas flux measurements should be equipped with at least one fan and a vent tube to increase mixing and reduce pressure propagation in the chamber-soil system, and that special attention should be paid to the handling of the chamber and to the timing of the gas sampling. References: Pumpanen, J., Kolari, P., Ilvesniemi, H., Minkkinen, K., Vesala, T., Niinistö, S., Lohila, A., Larmola, T., Morero, M., Pihlatie, M., Janssens, I., Curiel Yuste, J., Grünzweig, J. M., Reth, S., Subke, J.-A., Savage, K., Kutsch, W., Østreng, G., Ziegler, W., Anthoni, P., Lindroth, A. & Hari, P. 2004. Comparison of different chamber techniques for measuring soil CO2 efflux. Agricultural and Forest Meteorology 123, 159-176.

Dynamic consideration of smog chamber experiments

NASA Astrophysics Data System (ADS)

Chuang, Wayne K.; Donahue, Neil M.

2017-08-01

Recent studies of the α-pinene + ozone reaction that address particle nucleation show relatively high molar yields of highly oxidized multifunctional organic molecules with very low saturation concentrations that can form and grow new particles on their own. However, numerous smog-chamber experiments addressing secondary organic aerosol (SOA) mass yields, interpreted via equilibrium partitioning theory, suggest that the vast majority of SOA from α-pinene is semivolatile. We explore this paradox by employing a dynamic volatility basis set (VBS) model that reproduces the new-particle growth rates observed in the CLOUD experiment at CERN and then modeling SOA mass yield experiments conducted at Carnegie Mellon University (CMU). We find that the base-case simulations do overpredict observed SOA mass but by much less than an equilibrium analysis would suggest; this is because delayed condensation of vapors suppresses the apparent mass yields early in the chamber experiments. We further find that a second VBS model featuring substantial oligomerization of semivolatile monomers can match the CLOUD growth rates with substantially lower SOA mass yields; this is because the lighter monomers have a higher velocity and thus a higher condensation rate for a given mass concentration. The oligomerization simulations are a closer match to the CMU experiments than the base-case simulations, though they overpredict the observations somewhat. However, we also find that if the chemical conditions in CLOUD and the CMU chamber were identical, substantial nucleation would have occurred in the CMU experiments when in fact none occurred. This suggests that the chemical mechanisms differed in the two experiments, perhaps because the high oxidation rates in the SOA formation experiments led to rapid termination of peroxy radical chemistry.

Benthic Food Webs of the Chukchi and Beaufort Seas: Relative Importance of Ultimate Carbon Sources in a Changing Climate

NASA Astrophysics Data System (ADS)

Dunton, K. H.; Schonberg, S. V.; Mctigue, N.; Bucolo, P. A.; Connelly, T. L.; McClelland, J. W.

2014-12-01

Changes in sea-ice cover, coastal erosion, and freshwater run-off have the potential to greatly influence carbon assimilation pathways and affect trophic structure in benthic communities across the western Arctic. In the Chukchi Sea, variations in the duration and timing of ice cover affect the delivery of ice algae to a relatively shallow (40-50 m) shelf benthos. Although ice algae are known as an important spring carbon subsidy for marine benthic fauna, ice algal contributions may also help initiate productivity of an active microphytobenthos. Recent studies provide clear evidence that the microphytobenthos are photosynthetically active, and have sufficient light and nutrients for in situ growth. The assimilation of benthic diatoms from both sources may explain the 13C enrichment observed in benthic primary consumers throughout the northern Chukchi. On the eastern Beaufort Sea coast, shallow (2-4 m) estuarine lagoon systems receive massive subsidies of terrestrial carbon that is assimilated by a benthic fauna of significant importance to upper trophic level species, but again, distinct 13C enrichment in benthic primary consumers suggests the existence of an uncharacterized food source. Since ice algae are absent, we believe the 13C enrichment in benthic fauna is caused by the assimilation of benthic microalgae, as reflected in seasonally high benthic chlorophyll in spring under replete light and nutrient conditions. Our observations suggest that changes in ice cover, on both temporal and spatial scales, are likely to have significant effects on the magnitude and timing of organic matter delivery to both shelf and nearshore systems, and that locally produced organic matter may become an increasingly important carbon subsidy that affects trophic assimilation and secondary ecosystem productivity.

Historical assessments and comparisons of benthic communities and physical habitat in two agricultural streams in California's San Joaquin watershed.

PubMed

Hall, Lenwood W; Killen, William D

2006-01-01

This study was designed to assess trends in physical habitat and benthic communities (macroinvertebrates) annually in two agricultural streams (Del Puerto Creek and Salt Slough) in California's San Joaquin Valley from 2001 to 2005, determine the relationship between benthic communities and both water quality and physical habitat from both streams over the 5-year period, and compare benthic communities and physical habitat in both streams from 2001 to 2005. Physical habitat, measured with 10 metrics and a total score, was reported to be fairly stable over 5 years in Del Puerto Creek but somewhat variable in Salt Slough. Benthic communities, measured with 18 metrics, were reported to be marginally variable over time in Del Puerto Creek but fairly stable in Salt Slough. Rank correlation analysis for both water bodies combined showed that channel alteration, embeddedness, riparian buffer, and velocity/depth/diversity were the most important physical habitat metrics influencing the various benthic metrics. Correlations of water quality parameters and benthic community metrics for both water bodies combined showed that turbidity, dissolved oxygen, and conductivity were the most important water quality parameters influencing the different benthic metrics. A comparison of physical habitat metrics (including total score) for both water bodies over the 5-year period showed that habitat metrics were more positive in Del Puerto Creek when compared to Salt Slough. A comparison of benthic metrics in both water bodies showed that approximately one-third of the metrics were significantly different between the two water bodies. Generally, the more positive benthic metric scores were reported in Del Puerto Creek, which suggests that the communities in this creek are more robust than Salt Slough.

Structural and functional responses of periphyton and macroinvertebrate communities to ferric Fe, Cu, and Zn in stream mesocosms.

PubMed

Cadmus, Pete; Guasch, Helena; Herdrich, Adam T; Bonet, Berta; Urrea, Gemma; Clements, William H

2018-05-01

Two mesocosm experiments were conducted to examine effects of ferric iron (Fe) and mixtures of ferric Fe with aqueous metals (Cu, Zn) on stream benthic communities. Naturally colonized benthic communities were exposed to a gradient of ferric Fe (0, 0.4, 1.0, 2.5, 6.2, and 15.6 mg/L) that bracketed the current US Environmental Protection Agency water quality criterion value (1.0 mg/L). After 10 d of exposure to ferric Fe, total macroinvertebrate abundance, number of taxa, and abundance of all major macroinvertebrate groups (Ephemeroptera, Plecoptera, Trichoptera, and Diptera) were significantly reduced. Heptageniid mayflies and chironomids were especially sensitive to Fe oxide deposition and were significantly reduced at 0.4 and 1.0 mg/L total Fe, respectively. In a second mesocosm experiment, periphyton and macroinvertebrate communities were exposed to ferric Fe (0.60 mg/L) with or without aqueous Cu and Zn at 2 treatment levels: low (0.01 mg/L Cu + 0.1 mg/L Zn) and high (0.05 mg/L Cu + 0.5 mg/L Zn). In contrast to previous research, we observed no evidence of a protective effect of Fe on toxicity of metals. Growth rates and protein content of periphyton were significantly reduced by both ferric Fe and aqueous metals, whereas abundance of heptageniid mayflies (Cinygmula) and whole community metabolism were significantly reduced by ferric Fe alone. We hypothesize that Fe oxides inhibited algal growth and enhanced metal accumulation, leading to a reduction in the quantity and quality of food resources for grazers. Mesocosm experiments conducted using natural benthic communities provide a unique opportunity to quantify the relative importance of indirect physical effects and to develop a better understanding of the relationship between basal food resources and consumers in natural stream ecosystems. Environ Toxicol Chem 2018;37:1320-1329. © 2017 SETAC. © 2017 SETAC.

Development and test of combustion chamber for Stirling engine heated by natural gas

NASA Astrophysics Data System (ADS)

Li, Tie; Song, Xiange; Gui, Xiaohong; Tang, Dawei; Li, Zhigang; Cao, Wenyu

2014-04-01

The combustion chamber is an important component for the Stirling engine heated by natural gas. In the paper, we develop a combustion chamber for the Stirling engine which aims to generate 3˜5 kWe electric power. The combustion chamber includes three main components: combustion module, heat exchange cavity and thermal head. Its feature is that the structure can divide "combustion" process and "heat transfer" process into two apparent individual steps and make them happen one by one. Since natural gas can mix with air fully before burning, the combustion process can be easily completed without the second wind. The flame can avoid contacting the thermal head of Stirling engine, and the temperature fields can be easily controlled. The designed combustion chamber is manufactured and its performance is tested by an experiment which includes two steps. The experimental result of the first step proves that the mixture of air and natural gas can be easily ignited and the flame burns stably. In the second step of experiment, the combustion heat flux can reach 20 kW, and the energy utilization efficiency of thermal head has exceeded 0.5. These test results show that the thermal performance of combustion chamber has reached the design goal. The designed combustion chamber can be applied to a real Stirling engine heated by natural gas which is to generate 3˜5 kWe electric power.

Analytical characterization of selective benthic flux components in estuarine and coastal waters

USGS Publications Warehouse

King, Jeffrey N.

2011-01-01

Benthic flux is the rate of flow across the bed of a water body, per unit area of bed. It is forced by component mechanisms, which interact. For example, pressure gradients across the bed, forced by tide, surface gravity waves, density gradients, bed–current interaction, turbulence, and terrestrial hydraulic gradients, drive an advective benthic flux of water and constituents between estuarine and coastal waters, and surficial aquifers. Other mechanisms also force benthic flux, such as chemical gradients, bioturbation, and dispersion. A suite of component mechanisms force a total benthic flux at any given location, where each member of the suite contributes a component benthic flux. Currently, the types and characteristics of component interactions are not fully understood. For example, components may interact linearly or nonlinearly, and the interaction may be constructive or destructive. Benthic flux is a surface water–groundwater interaction process. Its discharge component to a marine water body is referred to, in some literature, as submarine groundwater discharge. Benthic flux is important in characterizing water and constituent budgets of estuarine and coastal systems. Analytical models to characterize selective benthic flux components are reviewed. Specifically, these mechanisms are for the component associated with the groundwater tidal prism, and forced by surface gravity wave setup, surface gravity waves on a plane bed, and the terrestrial hydraulic gradient. Analytical models are applied to the Indian River Lagoon, Florida; Great South Bay, New York; and the South Atlantic Bight in South Carolina and portions of North Carolina.

Benthic Algal Community Structures and Their Response to Geographic Distance and Environmental Variables in the Qinghai-Tibetan Lakes With Different Salinity

PubMed Central

Yang, Jian; Jiang, Hongchen; Liu, Wen; Wang, Beichen

2018-01-01

Uncovering the limiting factors for benthic algal distributions in lakes is of great importance to understanding of their role in global carbon cycling. However, limited is known about the benthic algal community distribution and how they are influenced by geographic distance and environmental variables in alpine lakes. Here, we investigated the benthic algal community compositions in the surface sediments of six lakes on the Qinghai-Tibetan Plateau (QTP), China (salinity ranging from 0.8 to 365.6 g/L; pairwise geographic distance among the studied lakes ranging 8–514 km) employing an integrated approach including Illumina-Miseq sequencing and environmental geochemistry. The results showed that the algal communities of the studied samples were mainly composed of orders of Bacillariales, Ceramiales, Naviculales, Oscillatoriales, Spirulinales, Synechococcales, and Vaucheriales. The benthic algal community compositions in these QTP lakes were significantly (p < 0.05) correlated with many environmental (e.g., dissolved inorganic and organic carbon, illumination intensity, total nitrogen and phosphorus, turbidity and water temperature) and spatial factors, and salinity did not show significant influence on the benthic algal community structures in the studied lakes. Furthermore, geographic distance showed strong, significant correlation (r = 0.578, p < 0.001) with the benthic algal community compositions among the studied lakes, suggesting that spatial factors may play important roles in influencing the benthic algal distribution. These results expand our current knowledge on the influencing factors for the distributions of benthic alga in alpine lakes. PMID:29636745

Oyster reef restoration in the Northern Gulf of Mexico: effect of artificial substrate and sge on nekton and benthic macroinvertebrate assemblage use

USGS Publications Warehouse

Brown, Laura A.; Furlong, Jessica N.; Brown, Kenneth M.; LaPeyre, Megan K.

2013-01-01

In the northern Gulf of Mexico (GOM), reefs built by eastern oysters, Crassostrea virginica, provide critical habitat within shallow estuaries, and recent efforts have focused on restoring reefs to benefit nekton and benthic macroinvertebrates. We compared nekton and benthic macroinvertebrate assemblages at historic, newly created (<5years) and old (>6years) shell and rock substrate reefs. Using crab traps, gill-nets, otter trawls, cast nets, and benthic macroinvertebrate collectors, 20 shallow reefs (<5m) in the northern GOM were sampled throughout the summer of 2011. We compared nekton and benthic assemblage abundance, diversity and composition across reef types. Except for benthic macroinvertebrate abundance, which was significantly higher on old rock reefs as compared to historic reefs, all reefs were similar to historic reefs, suggesting created reefs provide similar support of nekton and benthic assemblages as historic reefs. To determine refuge value of oyster structure for benthic macroinvertebrates compared to bare bottom, we tested preferences of juvenile crabs across depth and refuge complexity in the presence and absence of adult blue crabs (Callinectes sapidus). Juveniles were more likely to use deep water with predators present only when provided oyster structure. Provision of structural material to support and sustain development of benthic and mobile reef communities may be the most important factor in determining reef value to these assemblages, with biophysical characteristics related to reef location influencing assemblage patterns in areas with structure; if so, appropriately locating created reefs is critical.

Viscoplastic analysis of an experimental cylindrical thrust chamber liner

NASA Technical Reports Server (NTRS)

Arya, Vinod K.; Arnold, Steven M.

1991-01-01

A viscoplastic stress-strain analysis of an experimental cylindrical thrust chamber is presented. A viscoelastic constitutive model incorporating a single internal state variable that represents kinematic hardening was employed to investigate whether such a viscoplastic model could predict the experimentally observed behavior of the thrust chamber. Two types of loading cycles were considered: a short cycle of 3.5 sec. duration that corresponded to the experiments, and an extended loading cycle of 485.1 sec. duration that is typical of the Space Shuttle Main Engine (SSME) operating cycle. The analysis qualitatively replicated the deformation behavior of the component as observed in experiments designed to simulate SSME operating conditions. The analysis also showed that the mode and location in the component may depend on the loading cycle. The results indicate that using viscoplastic models for structural analysis can lead to a more realistic life assessment of thrust chambers.

The Phoretic Motion Experiment (PME) definition phase

NASA Technical Reports Server (NTRS)

Eaton, L. R.; Neste, S. L. (Editor)

1982-01-01

The aerosol generator and the charge flow devices (CFD) chamber which were designed for zero-gravity operation was analyzed. Characteristics of the CFD chamber and aerosol generator which would be useful for cloud physics experimentation in a one-g as well as a zero-g environment are documented. The Collision type of aerosol generator is addressed. Relationships among the various input and output parameters are derived and subsequently used to determine the requirements on the controls of the input parameters to assure a given error budget of an output parameter. The CFD chamber operation in a zero-g environment is assessed utilizing a computer simulation program. Low nuclei critical supersaturation and high experiment accuracies are emphasized which lead to droplet growth times extending into hundreds of seconds. The analysis was extended to assess the performance constraints of the CFD chamber in a one-g environment operating in the horizontal mode.

Paving the way for space gardens

NASA Technical Reports Server (NTRS)

Phillips, Patricia

1990-01-01

The Ecological Life Support System, a plant growth experiment now in its third year of closed chamber production at the NASA Kennedy Space Center, is discussed. Possible spin-off applications of hydrophonics experiments are noted. It is projected that long-term goals will include the integration of this garden system into the process of waste recycling for fertilization, air refreshment, and potable water recovery in a closed environment. The Biomass Production Chamber, a two-story bubble-shape steel biosphere modified from a Mercury/Gemini program attitude chamber provides a usable volume of 7.3 m x 3.6 m in diameter containing growing racks, piping for nutrient solutions, specialized lighting and sensors that provide information to the computers controlling the chamber and its functions. Computer programs provide highly sensitive monitoring and regulation of the system. Crops successfully harvested to date include dwarf wheat, lettuce, and soybeans.

Shift in the species composition of the diatom community in the eutrophic Mauritanian coastal upwelling: Results from a multi-year sediment trap experiment (2003-2010)

NASA Astrophysics Data System (ADS)

Romero, Oscar E.; Fischer, Gerhard

2017-12-01

A multiannual, continuous sediment trap experiment was conducted at the mooring site CBeu (Cape Blanc eutrophic, ca. 20 °N, ca. 18 °W; trap depth = 1256-1296 m) in the high-productive Mauritanian coastal upwelling. Here we present fluxes and the species-specific composition of the diatom assemblage, and fluxes of biogenic silica (BSi, opal) and total organic carbon (TOC) for the time interval June 2003-Feb 2010. Flux ranges of studied parameters are (i) total diatoms = 1.2 ∗ 108-4.7 ∗ 104 valves m-2 d-1 (average = 5.9 × 106 valves ± 1.4 × 107); (ii) BSi = 296-0.5 mg m-2 d-1 (average = 41.1 ± 53.5 mg m-2 d-1), and (iii) TOC = 97-1 mg m-2 d-1 (average = 20.5 ± 17.8 mg m-2 d-1). Throughout the experiment, the overall good match of total diatom, BSi and TOC fluxes is reasonably consistent and reflects well the temporal occurrence of the main Mauritanian upwelling season. Spring and summer are the most favorable seasons for diatom production and sedimentation: out of the recorded 14 diatom maxima of different magnitude, six occurred in spring and four in summer. The diverse diatom community at site CBeu is composed of four main assemblages: benthic, coastal upwelling, coastal planktonic and open-ocean diatoms, reflecting different productivity conditions and water masses. A striking feature of the temporal variability of the diatom populations is the persistent pattern of seasonal groups' contribution: benthic and coastal upwelling taxa dominated during the main upwelling season in spring, while open-ocean diatoms were more abundant in fall and winter, when the upper water column becomes stratified, upwelling relaxes and productivity decreases. The relative abundance of benthic diatoms strongly increased after 2006, yet their spring-summer contribution remained high until the end of the trap experiment. The occurrence of large populations of benthic diatoms at the hemipelagic CBeu site is interpreted to indicate transport from shallow waters via nepheloid layers. We argue that a significant amount of valves, BSi and TOC produced in waters overlying the Banc d'Arguin and the Mauritanian shelf is effectively transported to the CBeu trap in intermediate waters at the outer Mauritanian slope. The impact of the intermediate and bottom-near nepheloid layers-driven transport in the transfer of valves and bulk particulates and its potential contribution to the export of biogenic materials from the shelf and uppermost slope might play a significant role in hemipelagial fluxes off Mauritania.

Habitat segregation mediates predation by the benthic fish Cottus gobio on the exotic amphipod species Gammarus roeseli

NASA Astrophysics Data System (ADS)

Kaldonski, Nicolas; Lagrue, Clément; Motreuil, Sébastien; Rigaud, Thierry; Bollache, Loïc

2008-09-01

Predation is often considered as one of the most important biotic factor determining the success of exotic species. The freshwater amphipod Gammarus roeseli has widely colonized Western Europe, where it is frequently found in sympatry with the native species ( Gammarus pulex). Previous laboratory experiments revealed that G. roeseli may have an advantage over G. pulex through differential predation by native fish (brown trout). Morphological anti-predator defences (spines) were found responsible for lower rates of predation on the invasive G. roeseli. Here, using both field surveys and laboratory experiments, we tested if a differential of predation exists with other fish predators naturally encountered by gammarids. The main predators present in our field site were nocturnal benthic feeders (mainly bullheads, Cottus gobio). Fish diet analysis showed that, compared to its global availability in the river, G. roeseli was less consumed than G. pulex. In the field, however, G. roeseli was found mainly in the aquatic vegetation whereas G. pulex was found in all habitat types. Laboratory experiments in microcosms revealed that G. roeseli was less prone to predation by C. gobio only when vegetation was present. Depending on the type of predator, the differential of predation could therefore be mediated by antipredator behaviour, and a better usage of refuges, rather than by morphological defences.

Photosynthesis as a Possible Source of Gas Bubbles in Shallow Sandy Coastal Sediments

DTIC Science & Technology

2012-09-30

clearly demonstrates that gas bubbles can be formed when photosynthesis by benthic microalgae causes pore water to become supersaturated with oxygen...We also collected sediment samples from the upper few mm of sand to identify the dominant taxa of benthic microalgae present. Although benthic...Jan Rines (Graduate School of Oceanography / University of Rhode Island = GSO/URI) to identify the benthic microalgae in the samples. Following the

Nutrient and suspended-sediment concentrations and loads and benthic-invertebrate data for tributaries to the St. Croix River, Wisconsin and Minnesota, 1997-99

USGS Publications Warehouse

Lenz, Bernard N.; Robertson, Dale M.; Fallon, James D.; Ferrin, Randy

2001-01-01

Benthic invertebrates were sampled and indices of water quality were calculated at 16 tributaries in fall 1999. Benthic invertebrate indices indicated excellent to good water quality at all tributaries except Valley Creek, Willow River, and Kettle River. No relations were found between benthic invertebrate indices and the calculated and estimated 1999 annual tributary loads and yields.

Development of an aerosol chamber for calibration of 220Rn progeny detectors

NASA Astrophysics Data System (ADS)

Sorimachi, Atsuyuki; Ishikawa, Tetsuo; Tokonami, Shinji

2014-09-01

This paper describes an aerosol chamber system that can be used for calibrations and performance experiments of passive 220Rn progeny detectors. For the purpose of this study, an aerosol generation system using carnauba wax as the aerosol material was mounted into the 220Rn chamber. We used the chamber to measure characteristics of the equilibrium factor (F) of 220Rn and unattached fraction (fp) of 220Rn progeny, which are important parameters for dose estimation. The first experiment showed that continuous and stable generation of the unattached and aerosol-attached 220Rn progeny concentrations was obtained. We observed that the spatial distributions in the chamber of the vertical profiles of the unattached and aerosol-attached 220Rn progeny concentrations were homogeneous, as were the particle number concentration and count median diameter. The values of F and fp and their characteristics observed in this study were in the same range as the values reported from indoor measurements. We found that the characteristics of F and fp were dependent on the aerosol conditions (particle diameter and particle number concentration).

Contribution of benthic microalgae to the temporal variation in phytoplankton assemblages in a macrotidal system.

PubMed

Hernández Fariñas, Tania; Ribeiro, Lourenço; Soudant, Dominique; Belin, Catherine; Bacher, Cédric; Lampert, Luis; Barillé, Laurent

2017-10-01

Suspended marine benthic microalgae in the water column reflect the close relationship between the benthic and pelagic components of coastal ecosystems. In this study, a 12-year phytoplankton time-series was used to investigate the contribution of benthic microalgae to the pelagic system at a site along the French-Atlantic coast. Furthermore, all taxa identified were allocated into different growth forms in order to study their seasonal patterns. The highest contribution of benthic microalgae was observed during the winter period, reaching up to 60% of the carbon biomass in the water column. The haptobenthic growth form showed the highest contribution in terms of biomass, dominant in the fall-winter period when the turbidity and the river flow were high. The epipelic growth form did not follow any seasonal pattern. The epiphytic diatom Licmophora was most commonly found during summer. As benthic microalgae were found in the water column throughout the year, the temporal variation detected in the structure of pelagic assemblages in a macrotidal ecosystem was partly derived from the differentiated contribution of several benthic growth forms. © 2017 Phycological Society of America.

Environmental characteristics and benthic invertebrate assemblages in Colorado mountain lakes

USGS Publications Warehouse

LaFrancois, B.M.; Carlisle, D.M.; Nydick, K.R.; Johnson, B.M.; Baron, Jill S.

2003-01-01

Twenty-two high-elevation lakes (>3000 m) in Rocky Mountain National Park and Indian Peaks Wilderness Area, Colorado, were surveyed during summer 1998 to explore relationships among benthic invertebrates, water chemistry (particularly nitrate concentrations), and other environmental variables. Water samples were collected from the deepest portion of each lake and analyzed for ions and other water chemistry parameters. Benthic invertebrates were collected from the littoral zone using both a sweep net and Hess sampler. Physical and geographical measurements were derived from maps. Relationships among benthic invertebrate assemblages and environmental variables were examined using canonical correspondence analysis, and the importance of sampling methodology and taxonomie resolution on these relationships was evaluated. Choice of sampling methodology strongly influenced the outcome of statistical analyses, whereas taxonomie resolution did not. Presence/absence of benthic invertebrate taxa among the study lakes was best explained by elevation and presence of fish. Relative abundance and density of benthic invertebrate taxa were more strongly influenced by sampling date and water chemistry. Nitrate (NO₃⁻) concentration, potentially on the rise due to regional nitrogen deposition, was unrelated to benthic invertebrate distribution regardless of sampling method or taxonomie resolution.

AGATE: A High Energy Gamma-Ray Telescope Using Drift Chambers

NASA Astrophysics Data System (ADS)

Mukherjee, R.; Dingus, B. L.; Esposito, J. A.; Bertsch, D. L.; Cuddapah, R.; Fichtel, C. E.; Hartman, R. C.; Hunter, S. D.; Thompson, D. J.

1996-01-01

The exciting results from the highly successful Energetic Gamma-Ray Experiment Telescope (EGRET) instrument on the Compton Gamma-Ray Observatory (CGRO) has contributed significantly to increasing our understanding of high energy gamma-ray astronomy. A follow-on mission to EGRET is needed to continue these scientific advances as well as to address the several new scientific questions raised by EGRET. Here we describe the work being done on the development of the Advanced Gamma-Ray Astronomy Telescope Experiment (AGATE), visualized as the successor to EGRET. In order to achieve the scientific goals, AGATE will have higher sensitivity than EGRET in the energy range 30 MeV to 30 GeV, larger effective area, better angular resolution, and an extended low and high energy range. In its design, AGATE will follow the tradition of the earlier gamma-ray telescopes, SAS-2, COS B, and EGRET, and will have the same four basic components of an anticoincidence system, directional coincidence system, track imaging, and energy measurement systems. However, due to its much larger size, AGATE will use drift chambers as its track imaging system rather than the spark chambers used by EGRET. Drift chambers are an obvious choice as they have less deadtime per event, better spatial resolution, and are relatively easy and inexpensive to build. Drift chambers have low power requirements, so that many layers of drift chambers can be included. To test the feasibility of using drift chambers, we have constructed a prototype instrument consisting of a stack of sixteen 1/2m × 1/2m drift chambers and have measured the spatial resolution using atmospheric muons. The results on the drift chamber performance in the laboratory are presented here.

Meadow voles, Microtus pennsylvanicus, have the capacity to recall the "what", "where", and "when" of a single past event.

PubMed

Ferkin, Michael H; Combs, Amy; delBarco-Trillo, Javier; Pierce, Andrew A; Franklin, Stan

2008-01-01

Some non-human animals may possess the ability to recall the "what", "where", and "when" of a single past event. We tested the hypothesis that male meadow voles possess the capacity to recall the "what", "where", and "when" of a single past event associated with mate selection in two experiments. Briefly, male voles were allowed to explore an apparatus that contained two chambers. One chamber contained a day-20 pregnant female (24 h prepartum). The other chamber contained a sexually mature female that was neither pregnant nor lactating (REF female). Twenty-four hour after the exposure, the males were placed in the same apparatus, which was empty and clean. At this time, the pregnant female would have entered postpartum estrus (PPE), a period of heightened sexual receptivity. Males initially chose and spent significantly more time investigating the chamber that originally housed the pregnant female (now a PPE female) than the chamber that originally housed the REF female. Male voles also explored an apparatus containing a chamber with a PPE female and one chamber containing a REF female. Twenty-four hour later, males were placed into an empty and clean apparatus. The males did not display an initial choice and they spent similar amounts of time investigating the chamber that originally housed the PPE female (now a lactating female) and the chamber that originally housed the REF female. The results of these and additional experiments suggest that male voles may have the capacity to recall the "what", "where", and "when" of a single past event, which may allow males to remember the location of females who would currently be in heightened states of sexual receptivity.

Plume Measurement System (PLUMES) Calibration Experiment

DTIC Science & Technology

1994-08-01

calibration chamber was lished and documented. To apply acoustic designed and built Particles were suspended technology to monitoring suspended sedi- in the...procedures are described in Chap- ter 2. Repeatability of the experiments and validity of the results are de - scribed in Chapter 3. In Chapter 4, the range...went into their design . The first two subsections give an overview of the calibration chamber and its characteristics. The remaining subsections describe

EVALUATING SOURCES OF INDOOR AIR POLLUTION

EPA Science Inventory

The article discusses a three-phase approach, employing environmental chambers, indoor air quality (IAQ) models, and test house experiments, that is effective in linking sources of indoor pollutants to measured concentrations. mission factors developed in test chambers can be use...

The influence of reduced light intensity on the response of benthic diatoms to herbicide exposure.

PubMed

Wood, Rebecca J; Mitrovic, Simon M; Lim, Richard P; Kefford, Ben J

2016-09-01

Herbicide pollution events in aquatic ecosystems often coincide with increased turbidity and reduced light intensity. It is therefore important to determine whether reduced light intensity can influence herbicide toxicity, especially to primary producers such as benthic diatoms. Benthic diatoms collected from 4 rivers were exposed to herbicides in 48 h rapid toxicity tests under high light (100 µmol m(-2)  s(-1) ) and low light (20 µmol m(-2)  s(-1) ) intensities. The effects of 2 herbicides (atrazine and glyphosate) were assessed on 26 freshwater benthic diatom taxa. There was no significant interaction of light and herbicide effects at the community level or on the majority (22 of 26) of benthic diatom taxa. This indicates that low light levels will likely have only a minor influence on the response of benthic diatoms to herbicides. Environ Toxicol Chem 2016;35:2252-2260. © 2016 SETAC. © 2016 SETAC.

Effects of AEC chamber selection on patient dose and image quality.

PubMed

Hawking, Nancy; Elmore, Angie

2009-01-01

To determine whether manipulation of the standard automatic exposure control (AEC) chamber selections reduces the patient's entrance skin exposure (ESE) without compromising image quality. Data for density and radiation dose were gathered at 2 clinical locations by exposing abdomen and pelvis phantoms to radiation using 3 AEC chamber selection configurations. ESE (skin dose) was measured using a multipurpose dosimeter. The experiment included both film-screen and computed radiography (CR) systems. For both phantoms, using the 2 outside chambers resulted in the lowest dose on the film-screen and CR systems. In general, optical density (OD) and exposure indicator (EI) remained within acceptable ranges and image quality was maintained using this chamber configuration. Using only the center chamber resulted in the highest dose increases and lowest image quality for film-screen and CR systems. When performing anteroposterior (AP) abdomen and AP pelvis examinations, radiographers can reduce patients' ESE and maintain image quality by selecting the 2 outside AEC chambers. Further research on AEC chamber selection should be conducted for additional anatomical regions.

Microphytobenthos and benthic macroalgae determine sediment organic matter composition in shallow photic sediments

NASA Astrophysics Data System (ADS)

Hardison, A. K.; Canuel, E. A.; Anderson, I. C.; Tobias, C. R.; Veuger, B.; Waters, M.

2013-02-01

Benthic macroalgae are a common symptom of eutrophication in shallow coastal bays as a result of increased nutrient loads. Microphytobenthos (MPB) and benthic macroalgae play an important role in system metabolism within shallow coastal bays. However, their independent and interactive influences on sediment organic matter (SOM) are not well understood. We investigated the influence of macroalgae and MPB on SOM quantity and quality in an experimental mesocosm system using bulk and molecular level (total hydrolyzable amino acids, THAA; phospholipid linked fatty acids, PLFA; pigment) analyses. Our experiment used an incomplete factorial design made up of two factors, each with two levels: (1) light (ambient vs. dark) and (2) macroalgae (presence vs. absence of live macroalgae). Over the course of the 42-day experiment, total organic carbon (TOC) and total nitrogen (TN) increased under ambient light by 173 ± 14 and 141 ± 7%, respectively, compared to in the dark (78 ± 29 and 39 ± 22%). THAA comprised a substantial fraction of SOM (∼16% of TOC, 35% of TN) and followed TOC and TN accumulation patterns. Mole percent composition of the THAA pool indicated that SOM was composed of more labile organic material (e.g. L-glutamic acid, phenylalanine) under ambient light conditions while SOM in dark treatments was more degraded, with higher proportions of glycine and D-alanine. PLFA content, which represents viable biomass, made up ∼1% of TOC and contained high levels of algal fatty acids in the light, particularly PLFA derived from diatoms. In the presence of MPB (i.e. light and macroalgae treatments), SOM lability increased, resulting in the observed increases in bacterial PLFA concentrations. Macroalgae, which were added to half of the light treatments, decreased SOM accumulation compared to light treatments without macroalgae, with TOC and TN increasing by only 130 ± 32 and 94 ± 24 %, respectively. This decrease likely resulted from shading by macroalgae, which reduced production of MPB. The presence of macroalgae decreased SOM lability as well, which resulted in diminished buildup of bacterial biomass. By the final day of the experiment, PCA analyses revealed that sediment composition in treatments with macroalgae were more similar to dark treatments and less similar to light treatments without macroalgae. Overall MPB and benthic macroalgae fundamentally altered SOM quality and quantity, which may have notable ecological consequences for shallow-water systems such as increased hypoxia/anoxia, sulfide accumulation, enhanced mineralization and/or stimulated denitrification.

Molecular-beam gas-sampling system

NASA Technical Reports Server (NTRS)

Young, W. S.; Knuth, E. L.

1972-01-01

A molecular beam mass spectrometer system for rocket motor combustion chamber sampling is described. The history of the sampling system is reviewed. The problems associated with rocket motor combustion chamber sampling are reported. Several design equations are presented. The results of the experiments include the effects of cooling water flow rates, the optimum separation gap between the end plate and sampling nozzle, and preliminary data on compositions in a rocket motor combustion chamber.

1 Kw Arc-Jet Engine: Experiments With Argon

DTIC Science & Technology

2004-06-23

3 s- 6 ) R + R ( non-linear) FLAME STABILITY CHAMBER PRESSURE 1.0 - 1.625 atm VACUUM PRESSURE 30 – 30 mmHg FLAME LENGTH 28 – 33 mm CHAMBER...PRESSURE 2.25 – 2.875 atm VACUUM PRESSURE 30 – 40 mmHg FLAME LENGTH 36 – 42 mm CHAMBER PRESSURE 3.0 – 3.0 atm VACUUM PRESSURE 60 – 36 mmHg FLAME LENGTH 18

Orientation and Polarisation Effects in Reactive Collisions

DTIC Science & Technology

1989-01-01

18 To clock the reaction, an ultrashort laser pulse initiates the experiment by photodis- sociating the HI, ejecting a translationally hot H atom in...the chamber and travels down; the pulsed , linearly polarized u.v. laser beam passes from right to left, going through a polarization rotator before... pulsed beam valve above the chamber; the pulsed linearly polarized laser beam passes through a polarization rotator before entering the chamber. Two

The atmosphere simulation chamber SAPHIR: a tool for the investigation of photochemistry.

NASA Astrophysics Data System (ADS)

Brauers, T.; Bohn, B.; Johnen, F.-J.; Rohrer, R.; Rodriguez Bares, S.; Tillmann, R.; Wahner, A.

2003-04-01

On the campus of the Forschungszentrum Jülich we constructed SAPHIR (Simulation of Atmospheric PHotochemistry In a large Reaction Chamber) which was accomplished in fall 2001. The chamber consists of a 280-m^3 double-wall Teflon bag of cylindrical shape that is held by a steel frame. Typically 75% of the outside actinic flux (290~nm~--~420~nm) is available inside the chamber. A louvre system allows switching between full sun light and dark within 40 s giving the opportunity to study relaxation processes of the photo chemical system. The SAPHIR chamber is equipped with a comprehensive set of sensitive instruments including the measurements of OH, HO_2, CO, hydrocarbons, aldehydes, nitrogen-oxides and solar radiation. Moreover, the modular concept of SAPHIR allows fast and flexible integration of new instruments and techniques. In this paper we will show the unique and new features of the SAPHIR chamber, namely the clean air supply and high purity water vapor supply providing a wide range of trace gas concentrations being accessible through the experiments. We will also present examples from the first year of SAPHIR experiment showing the scope of application from high quality instrument inter-comparison and kinetic studies to the simulation of complex mixtures of trace gases at ambient concentrations.

Photochemistry of Glyoxal in Wet Aerosols: Smog Chamber Study

NASA Astrophysics Data System (ADS)

Lim, Y. B.; Kim, H.; Turpin, B. J.

2015-12-01

Aqueous chemistry is an important pathway for the formation of secondary organic aerosol (SOA). Reaction vessel studies provide evidence that in the aqueous phase photooxidation of water soluble organic compounds (e.g., glyoxal, methylglyoxal) form multifunctional organic products and oligomers. In this work, we extend this bulk-phase chemistry to the condensed-phase chemistry that occurs in/on aerosols by conducting smog chamber experiments — photooxidation of ammonium sulfate and sulfuric acid aerosols containing glyoxal and hydrogen peroxide in the presence of NOx under dry/humid conditions. Particles were analyzed using ultra performance liquid chromatography coupled to quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF-MS). In the irradiated chamber, photooxidation products of glyoxal as seen in reaction vessel experiments (e.g., oxalic acids and tartaric acids) were also formed in both ammonium sulfate aerosols and sulfuric acid aerosols at humid and even dry conditions. However, the major products were organosulfurs (CHOS), organonitrogens (CHON), and nitrooxy-organosulfates (CHONS), which were also dominantly formed in the dark chamber. These products were formed via non-radical reactions, which depend on acidity and humidity. However, the real-time profiles in the dark chamber and the irradiated chamber were very different, suggesting photochemistry substantially affects non-radical formation in the condensed phase.

Secondary Organic Aerosol Formation in the Captive Aerosol Growth and Evolution (CAGE) Chambers during the Southern Oxidant and Aerosol Study (SOAS) in Centreville, AL

NASA Astrophysics Data System (ADS)

Leong, Y.; Karakurt Cevik, B.; Hernandez, C.; Griffin, R. J.; Taylor, N.; Matus, J.; Collins, D. R.

2013-12-01

Secondary organic aerosol (SOA) represents a large portion of sub-micron particulate matter on a global scale. The composition of SOA and its formation processes are heavily influenced by anthropogenic and biogenic activity. Volatile organic compounds (VOCs) that are emitted naturally from forests or from human activity serve as precursors to SOA formation. Biogenic SOA (BSOA) is formed from biogenic VOCs and is prevalent in forested regions like the Southeastern United States. The formation and enhancement of BSOA under anthropogenic influences such as nitrogen oxides (NOx), sulfur dioxide (SO2), and oxygen radicals are still not well understood. The lack of information on anthropogenic BSOA enhancement and the reversibility of SOA formation could explain the underprediction of SOA in current models. To address some of these gaps in knowledge, this study was conducted as part of the Southern Oxidant and Aerosol Study (SOAS) in Centreville, AL during the summer of 2013. SOA growth experiments were conducted in two Captive Aerosol Growth and Evolution (CAGE) outdoor chambers located at the SEARCH site. Ambient trace gas concentrations were maintained in these chambers using semi-permeable gas-exchange membranes, while studying the growth of injected monodisperse seed aerosol. The control chamber was operated under ambient conditions; the relative humidity and oxidant and NOx levels were perturbed in the second chamber. This design allows experiments to capture the natural BSOA formation processes in the southeastern atmosphere and to study the influence of anthropogenic activity on aerosol chemistry. Chamber experiments were periodically monitored with physical and chemical instrumentation including a scanning mobility particle sizer (SMPS), a cloud condensation nuclei counter (CCNC), a humidified tandem differential mobility analyzer (H-TDMA), and an Aerodyne high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS). The CAGE experiments focused on SOA reversibility and the sensitivity of SOA reactions to oxidant or NOx enhancement and aerosol liquid water content. Available ambient trace gas concentrations include VOCs, NOx, SO2, ozone, peroxyaxyl nitrates, and ammonia. Chamber data will also be compared to ambient aerosol measurements collected by the instruments mentioned above as well as those from other research groups.

New climatic targets against global warming: will the maximum 2 °C temperature rise affect estuarine benthic communities?

PubMed

Crespo, Daniel; Grilo, Tiago Fernandes; Baptista, Joana; Coelho, João Pedro; Lillebø, Ana Isabel; Cássio, Fernanda; Fernandes, Isabel; Pascoal, Cláudia; Pardal, Miguel Ângelo; Dolbeth, Marina

2017-06-20

The Paris Agreement signed by 195 countries in 2015 sets out a global action plan to avoid dangerous climate change by limiting global warming to remain below 2 °C. Under that premise, in situ experiments were run to test the effects of 2 °C temperature increase on the benthic communities in a seagrass bed and adjacent bare sediment, from a temperate European estuary. Temperature was artificially increased in situ and diversity and ecosystem functioning components measured after 10 and 30 days. Despite some warmness effects on the analysed components, significant impacts were not verified on macro and microfauna structure, bioturbation or in the fluxes of nutrients. The effect of site/habitat seemed more important than the effects of the warmness, with the seagrass habitat providing more homogenous results and being less impacted by warmness than the adjacent bare sediment. The results reinforce that most ecological responses to global changes are context dependent and that ecosystem stability depends not only on biological diversity but also on the availability of different habitats and niches, highlighting the role of coastal wetlands. In the context of the Paris Agreement it seems that estuarine benthic ecosystems will be able to cope if global warming remains below 2 °C.

Macrofouling communities and the degradation of plastic bags in the sea: an in situ experiment

PubMed Central

Petermann, Jana S.; Lott, Christian; Weber, Miriam

2017-01-01

The increasing amount of plastic littered into the sea may provide a new substratum for benthic organisms. These marine fouling communities on plastic have not received much scientific attention. We present, to our knowledge, the first comprehensive analysis of their macroscopic community composition, their primary production and the polymer degradation comparing conventional polyethylene (PE) and a biodegradable starch-based plastic blend in coastal benthic and pelagic habitats in the Mediterranean Sea. The biomass of the fouling layer increased significantly over time and all samples became heavy enough to sink to the seafloor. The fouling communities, consisting of 21 families, were distinct between habitats, but not between polymer types. Positive primary production was measured in the pelagic, but not in the benthic habitat, suggesting that large accumulations of floating plastic could pose a source of oxygen for local ecosystems, as well as a carbon sink. Contrary to PE, the biodegradable plastic showed a significant loss of tensile strength and disintegrated over time in both habitats. These results indicate that in the marine environment, biodegradable polymers may disintegrate at higher rates than conventional polymers. This should be considered for the development of new materials, environmental risk assessment and waste management strategies. PMID:29134070

Benthic meiofaunal community response to the cascading effects of herbivory within an algal halo system of the Great Barrier Reef

PubMed Central

Hammill, Edward; Booth, David J.; Madin, Elizabeth M. P.; Hinchliffe, Charles; Harborne, Alastair R.; Lovelock, Catherine E.; Macreadie, Peter I.; Atwood, Trisha B.

2018-01-01

Benthic fauna play a crucial role in organic matter decomposition and nutrient cycling at the sediment-water boundary in aquatic ecosystems. In terrestrial systems, grazing herbivores have been shown to influence below-ground communities through alterations to plant distribution and composition, however whether similar cascading effects occur in aquatic systems is unknown. Here, we assess the relationship between benthic invertebrates and above-ground fish grazing across the ‘grazing halos’ of Heron Island lagoon, Australia. Grazing halos, which occur around patch reefs globally, are caused by removal of seagrass or benthic macroalgae by herbivorous fish that results in distinct bands of unvegetated sediments surrounding patch reefs. We found that benthic algal canopy height significantly increased with distance from patch reef, and that algal canopy height was positively correlated with the abundances of only one invertebrate taxon (Nematoda). Both sediment carbon to nitrogen ratios (C:N) and mean sediment particle size (μm) demonstrated a positive correlation with Nematoda and Arthropoda (predominantly copepod) abundances, respectively. These positive correlations indicate that environmental conditions are a major contributor to benthic invertebrate community distribution, acting on benthic communities in conjunction with the cascading effects of above-ground algal grazing. These results suggest that benthic communities, and the ecosystem functions they perform in this system, may be less responsive to changes in above-ground herbivorous processes than those previously studied in terrestrial systems. Understanding how above-ground organisms, and processes, affect their benthic invertebrate counterparts can shed light on how changes in aquatic communities may affect ecosystem function in previously unknown ways. PMID:29513746

Benthic meiofaunal community response to the cascading effects of herbivory within an algal halo system of the Great Barrier Reef.

PubMed

Ollivier, Quinn R; Hammill, Edward; Booth, David J; Madin, Elizabeth M P; Hinchliffe, Charles; Harborne, Alastair R; Lovelock, Catherine E; Macreadie, Peter I; Atwood, Trisha B

2018-01-01

Benthic fauna play a crucial role in organic matter decomposition and nutrient cycling at the sediment-water boundary in aquatic ecosystems. In terrestrial systems, grazing herbivores have been shown to influence below-ground communities through alterations to plant distribution and composition, however whether similar cascading effects occur in aquatic systems is unknown. Here, we assess the relationship between benthic invertebrates and above-ground fish grazing across the 'grazing halos' of Heron Island lagoon, Australia. Grazing halos, which occur around patch reefs globally, are caused by removal of seagrass or benthic macroalgae by herbivorous fish that results in distinct bands of unvegetated sediments surrounding patch reefs. We found that benthic algal canopy height significantly increased with distance from patch reef, and that algal canopy height was positively correlated with the abundances of only one invertebrate taxon (Nematoda). Both sediment carbon to nitrogen ratios (C:N) and mean sediment particle size (μm) demonstrated a positive correlation with Nematoda and Arthropoda (predominantly copepod) abundances, respectively. These positive correlations indicate that environmental conditions are a major contributor to benthic invertebrate community distribution, acting on benthic communities in conjunction with the cascading effects of above-ground algal grazing. These results suggest that benthic communities, and the ecosystem functions they perform in this system, may be less responsive to changes in above-ground herbivorous processes than those previously studied in terrestrial systems. Understanding how above-ground organisms, and processes, affect their benthic invertebrate counterparts can shed light on how changes in aquatic communities may affect ecosystem function in previously unknown ways.

Dynamic cell culture system (7-IML-1)

NASA Technical Reports Server (NTRS)

Cogoli, Augusto

1992-01-01

This experiment is one of the Biorack experiments being flown on the International Microgravity Laboratory 1 (MIL-1) mission as part of an investigation studying cell proliferation and performance in space. One of the objectives of this investigation is to assess the potential benefits of bioprocessing in space with the ultimate goal of developing a bioreactor for continuous cell cultures in space. This experiment will test the operation of an automated culture chamber that was designed for use in a Bioreactor in space. The device to be tested is called the Dynamic Cell Culture System (DCCS). It is a simple device in which media are renewed or chemicals are injected automatically, by means of osmotic pumps. This experiment uses four Type I/O experiment containers. One DCCS unit, which contains a culture chamber with renewal of medium and a second chamber without a medium supply fits in each container. Two DCCS units are maintained under zero gravity conditions during the on-orbit period. The other two units are maintained under 1 gh conditions in a 1 g centrifuge. The schedule for incubator transfer is given.

A reevaluation of the lineage development of Pararotalia and Praepararotalia including new material from the Rupelian of the southern Upper Rhine Graben

NASA Astrophysics Data System (ADS)

Pirkenseer, C.; Spezzaferri, S.

2009-04-01

The lineage of the benthic Foraminifera Praepararotalia and Pararotalia has a known record since the Late Cretaceous to recent. Showing a wide range of morphologic variations, the most recent thorough generic definition of Pararotalia is heavily based on internal structures (e.g., HOTTINGER et al. 1991). Thus many of the older, not revised species are still assigned to Pararotalia by means of visible external structures. This applies also to the genus Praepararotalia (Cretaceous to Late Eocene), erected by LIU et al. (1998) as a "simple" predecessor-taxon with generally round, smooth to pustulated chambers of slowly increasing diameter, very low to flat spiral side and small overall size. Wall texture and aperture are identical in both genera. According to LIU et al. (1998) Pararotalia s.str. is characterized by a general size increase, planoconvex test, the development of peripheral pseudospines, keel and increasingly conical chambers ("angular" habitus) as well as a distinct umbilical sutures and plug. Pararotalia macneilli (Danian) and P. ishamae (Thanetian) are considered to represent linking species, the main difference being the initial development of an umbilical plug. The separation of the two genera took place in the Late Cretaceous or Earliest Paleogene, with Praepararotalia cretacea being the ancestral species (LIU et al. 1998). We present here a reevaluation of the morphogroups based on material from the Rupelian of the southern Upper Rhine Graben and the analysis of the record of reported species from literature. Four different groups can be separated in terms of external morphology. The first group represents the Praepararotalia-habitus of small size. New material from the Rupelian of the southern Upper Rhine Graben may be attributed to this group. It differs in a higher number of chambers in the last whorl and total chamber numbers (5-6 vs. 6-7, 11-16 vs. up to 22), a much larger size (up to 500µm) and a higher trochospire. Some specimens show a more rapid increase of chamber size. The necessity of a new genus is in discussion. The second group includes the small intermediate species as Pararotalia ishamae, characterized by inflated globular chambers, a general absence of a keel, partial development of small pseudospines and umbilical plugs. This group can be traced up to recent, as is indicated by the occurrence of small sized Pararotalia cananeiaensis (DEBENAY et al. 2001). Material from the research area (PIRKENSEER 2007), though of generally larger size is attributed to the Rupelian P. curryi. It however shows variation in the development of pseudospines, the lateral profile and umbilicus. The latter species may be a synonym of the similar Late Eocene P. parva. The third group consists only of Pararotalia spinigera (Lutetian) and Pararotalia canui (Rupelian) with an inflated angular lateral profile and a relatively large size. Material from the research area attributed to P. canui shows massive well-developed peripheral pseudospines, a strong umbilical plug and a rounded keel. Double pseudospines occur sporadically. The apertural lip is heavily toothed. The fourth group consists of species with a very angular lateral profile, conical chambers, distinct umbilical plug and a moderate to very large size (up to 600µm), ranging from the Thanetian (Pararotalia minimalis) at least to the Pliocene (P. padana, MANCIN et al. 2000). This reevaluation indicates the perseverance of the "primitive" group of Pararotalia macneilli until today. It thus contradicts a gradual development of the genus Pararotalia to more spineous, angular and larger forms. The latter morphogroup exists well defined since the Paleocene with representatives throughout the Paleogene and Neogene. This study was partly funded by the Swiss National Science Foundation projects 109457 and 118025. References: DEBENAY, J. P., DULEBA, W., BONETTI, C., et al. (2001): Pararotalia cananeiaensis n. sp.: indicator of marine influence and water circulation in Brazilian coastal and paralic environments. - Journal of Foraminiferal Research, 31, 2: 152-163. HOTTINGER, L., HALICZ, E. & REISS, Z. (1991): The foraminiferal genera Pararotalia, Neorotalia, and Calcarina: taxonomic revision. - Journal of Paleontology, 65, 1: 18-33. LIU, C., OLSSON, R. K. & HUBERT, B. T. (1998): A benthic paleohabitat for Praepararotalia gen. nov. and Antarcticella Loeblich and Tappan. - Journal of Foraminiferal Research, 28, 1: 3-18. MANCIN, N., PIRINI, C. & LANFRANCHINI, P.L. (2000): New species of Pararotalia LE CALVEZ, in Pliocene sediments of the Lower Valsesia and Western Liguria. - Bollettina della Società Paleontologica Italiana, 39, 3: 341-350. PIRKENSEER, C. (2007): Foraminifera, Ostracoda and other microfossils of the Southern Upper Rhine Graben - Palaeoecology, biostratigraphy, palaeogeography and geodynamic implications. - PhD thesis: 340p, Fribourg.

Exploring local adaptation and the ocean acidification seascape - studies in the California Current Large Marine Ecosystem

NASA Astrophysics Data System (ADS)

Hofmann, G. E.; Evans, T. G.; Kelly, M. W.; Padilla-Gamiño, J. L.; Blanchette, C. A.; Washburn, L.; Chan, F.; McManus, M. A.; Menge, B. A.; Gaylord, B.; Hill, T. M.; Sanford, E.; LaVigne, M.; Rose, J. M.; Kapsenberg, L.; Dutton, J. M.

2014-02-01

The California Current Large Marine Ecosystem (CCLME), a temperate marine region dominated by episodic upwelling, is predicted to experience rapid environmental change in the future due to ocean acidification. The aragonite saturation state within the California Current System is predicted to decrease in the future with near-permanent undersaturation conditions expected by the year 2050. Thus, the CCLME is a critical region to study due to the rapid rate of environmental change that resident organisms will experience and because of the economic and societal value of this coastal region. Recent efforts by a research consortium - the Ocean Margin Ecosystems Group for Acidification Studies (OMEGAS) - has begun to characterize a portion of the CCLME; both describing the spatial mosaic of pH in coastal waters and examining the responses of key calcification-dependent benthic marine organisms to natural variation in pH and to changes in carbonate chemistry that are expected in the coming decades. In this review, we present the OMEGAS strategy of co-locating sensors and oceanographic observations with biological studies on benthic marine invertebrates, specifically measurements of functional traits such as calcification-related processes and genetic variation in populations that are locally adapted to conditions in a particular region of the coast. Highlighted in this contribution are (1) the OMEGAS sensor network that spans the west coast of the US from central Oregon to southern California, (2) initial findings of the carbonate chemistry amongst the OMEGAS study sites, and (3) an overview of the biological data that describes the acclimatization and the adaptation capacity of key benthic marine invertebrates within the CCLME.

Marine Microbial Gene Abundance and Community Composition in Response to Ocean Acidification and Elevated Temperature in Two Contrasting Coastal Marine Sediments.

PubMed

Currie, Ashleigh R; Tait, Karen; Parry, Helen; de Francisco-Mora, Beatriz; Hicks, Natalie; Osborn, A Mark; Widdicombe, Steve; Stahl, Henrik

2017-01-01

Marine ecosystems are exposed to a range of human-induced climate stressors, in particular changing carbonate chemistry and elevated sea surface temperatures as a consequence of climate change. More research effort is needed to reduce uncertainties about the effects of global-scale warming and acidification for benthic microbial communities, which drive sedimentary biogeochemical cycles. In this research, mesocosm experiments were set up using muddy and sandy coastal sediments to investigate the independent and interactive effects of elevated carbon dioxide concentrations (750 ppm CO 2 ) and elevated temperature (ambient +4°C) on the abundance of taxonomic and functional microbial genes. Specific quantitative PCR primers were used to target archaeal, bacterial, and cyanobacterial/chloroplast 16S rRNA in both sediment types. Nitrogen cycling genes archaeal and bacterial ammonia monooxygenase ( amoA ) and bacterial nitrite reductase ( nirS ) were specifically targeted to identify changes in microbial gene abundance and potential impacts on nitrogen cycling. In muddy sediment, microbial gene abundance, including amoA and nirS genes, increased under elevated temperature and reduced under elevated CO 2 after 28 days, accompanied by shifts in community composition. In contrast, the combined stressor treatment showed a non-additive effect with lower microbial gene abundance throughout the experiment. The response of microbial communities in the sandy sediment was less pronounced, with the most noticeable response seen in the archaeal gene abundances in response to environmental stressors over time. 16S rRNA genes ( amoA and nirS ) were lower in abundance in the combined stressor treatments in sandy sediments. Our results indicated that marine benthic microorganisms, especially in muddy sediments, are susceptible to changes in ocean carbonate chemistry and seawater temperature, which ultimately may have an impact upon key benthic biogeochemical cycles.

Genetic and toxinological characterization of North Atlantic strains of the dinoflagellate Ostreopsis and allelopathic interactions with toxic and non-toxic species from the genera Prorocentrum, Coolia and Gambierdiscus.

PubMed

García-Portela, María; Riobó, Pilar; Franco, José Mariano; Bañuelos, Rosa Mª; Rodríguez, Francisco

2016-12-01

The genus Ostreopsis includes several toxic species that can develop blooms in benthic ecosystems, with potential harmful consequences for human health and marine invertebrates. Despite of this, little is known about the allelopathic interactions between these organisms and other co-occurring microalgae that exploit similar spatial and nutrient resources in benthic ecosystems. The aim of this study was to follow these interactions in cultures of two Ostreopsis ribotypes with different toxin profiles (O. cf. ovata contained ovatoxins-a, b, c and e, while only ovatoxin-d was found in O .sp. "Lanzarote-type"), mixed with species of three benthic dinoflagellate genera (Coolia, Prorocentrum and Gambierdiscus), isolated from the same area (North East Atlantic, Canary Islands). In a first experiment, the potential allelopathic effects on growth rates were followed, in mixed cultures of Coolia monotis (a non toxic species) exposed to the clarified medium and to cells of O. sp."Lanzarote-type" and O. cf. ovata. Growth delayed in C. monotis was observed specially in clarified medium, while the O. sp. "Lanzarote-type" strain attained much lower densities in mixed cultures. In a second experiment, we examined the potential effects of clarified media from O. sp."Lanzarote-type" and O. cf. ovata on the adherence capacity in two toxic species (Prorocentrum hoffmannianum and Gambierdiscus excentricus). Contrasting effects were found: a significant increase of adherence capacity in P. hoffmannianum vs attachment decline in G. excentricus, that experienced also severe deleterious effects (cell lysis). Our results suggest the existence of weak to moderate allelopathic interactions between the studied organisms, although the outcome is dependent on the species involved. Copyright © 2016 Elsevier B.V. All rights reserved.

Advanced Thermionic Technology Program

NASA Technical Reports Server (NTRS)

1977-01-01

Topics include surface studies (surface theory, basic surface experiments, and activation chamber experiments); plasma studies (converter theory and enhanced mode conversion experiments); and component development (low temperature conversion experiments, high efficiency conversion experiments, and hot shell development).

Benthic Macroinvertebrate Assemblages in the Near Coastal Zone of Lake Erie

EPA Science Inventory

Benthic macroinvertebrate assemblages have been used as indicators of ecological condition because their responses integrate localized environmental conditions of the sediments and overlying water. Assemblages of benthic invertebrates in the near coastal region are of particular...

Long-term historical analysis of benthic communities and physical habitat in an agricultural stream in California's San Joaquin River watershed.

PubMed

Hall, Lenwood W; Killen, William D; Alden, Raymond

2009-05-01

This study was designed to characterize long-term annual temporal and spatial trends (2001 to 2007) in physical habitat and benthic communities and to determine relationships of habitat and benthic communities during this 7-year period in an agricultural stream in the San Joaquin River watershed in California (Del Puerto Creek). The canonical discriminant analysis indicated that there were no overall significant temporal patterns for the habitat metrics although spatial patterns were prominent for nearly all the habitat metrics. Channel alteration, riparian vegetative zone, bank stability, vegetative protection and frequency of riffles/bends were the primary habitat metrics associated with these site effects. Approximately 3,700 to 4,500 individual macroinvertebrates were picked and identified from five Del Puerto Creek sites sampled annually from 2001 to 2007. The total number of taxa by year ranged from 81 in 2003 to 106 in 2007. These benthic assemblages were generally comprised of tolerant to moderately tolerant taxa such as blackflies, oligochaetes, snails and chironomids. The metrics % predators, % EPT index, % collectors/filterers and % shredders were the benthic metrics that were most associated with the temporal effects. Ephemeroptera taxa, trichoptera taxa, and % sensitive EPT index were the benthic metrics that were most associated with the site effects. The most upstream site in Del Puerto Creek had the most robust and healthy benthic communites. Strong statistical relationships were reported between certain benthic metrics and habitat metrics. Overall, samples taken from site-year combinations with sediments that were qualitatively less muddy (less fines) and that had higher habitat metric scores for embeddedness, riparian vegetative zone, and channel alteration tended to have benthic communities characterized by higher values of the benthic metrics such as EPT taxa, Ephemeroptera taxa, EPT index, abundance, and taxonomic richness, among others. Conversely, tolerance value and % tolerant taxa, the indicators of stressed benthic communities, were found to be inversely related to Bank Stability and Riparian vegetative zone (respectively), both indicators of habitat quality. Relationships between the quality of the physical habitat and the health of the benthic communities in aquatic systems, such as agricultural streams, needs to be considered before the impact of anthropogenic agents (e.g., pesticides, metals, and other potential toxicants) or other man-made perturbations may be understood. Otherwise, the interpretation of patterns of environmental conditions or causalities may be confounded.

Burial and exhumation of temperate bedrock reefs as elucidated by repetitive high-resolution sea floor sonar surveys: Spatial patterns and impacts to species' richness and diversity

USGS Publications Warehouse

Storlazzi, Curt D.; Fregoso, Theresa A.; Figurski, Jared D.; Freiwald, Jan; Lonhart, Steve I.; Finlayson, David P.

2013-01-01

To understand how chronic sediment burial and scour contribute to variation in the structure of algal and invertebrate communities on temperate bedrock reefs, the dynamics of the substrate and communities were monitored at locations that experience sand inundation and adjacent areas that do not. Co-located benthic scuba-transect surveys and high-resolution swath-sonar surveys were completed on bedrock reefs on the inner shelf of northern Monterey Bay, CA, in early winter 2009, spring 2010, and summer 2010. Analysis of the sonar surveys demonstrates that during the 8 months over which the surveys were conducted, 19.6% of the study area was buried by sand while erosion resulted in the exposure of bedrock over 13.8% of the study area; the remainder underwent no change between the surveys. Substrate classifications from the benthic transect surveys correlated with classifications generated from the sonar surveys, demonstrating the capacity of high-resolution sonar surveys to detect burial of bedrock reefs by sediment. On bedrock habitat that underwent burial and exhumation, species' diversity and richness of rock-associated sessile and mobile organisms were 50–66% lower as compared to adjacent stable bedrock habitat. While intermediate levels of disturbance can increase the diversity and richness of communities, these findings demonstrate that burial and exhumation of bedrock habitat are sources of severe disturbance. We suggest that substrate dynamics must be considered when developing predictions of benthic community distributions based on sea floor imagery. These results highlight the need for predictive models of substrate dynamics and for a better understanding of how burial and exhumation shape benthic communities.

Inter-Cohort Cannibalism of Early Benthic Phase Blue King Crabs (Paralithodes platypus): Alternate Foraging Strategies in Different Habitats Lead to Different Functional Responses

PubMed Central

Daly, Benjamin; Long, W. Christopher

2014-01-01

Blue king crabs (Paralithodes platypus) are commercially and ecologically important in Alaska, USA, but population abundances have fluctuated over the past several decades likely resulting from a combination of environmental and biological factors, including recruitment variability. Cannibalism between cohorts may be a source of mortality limiting recruitment success in the wild, but the degree of inter-cohort cannibalism is unknown for early benthic phase blue king crabs. In laboratory experiments, we evaluated the effects of habitat type (sand and shell) on the predator functional response and foraging behavior of year-1 blue king crabs as predators of year-0 conspecifics and examined the effects of predator presence on crypsis of prey crabs. In sand, consumption rates increased with predator size and prey density until satiation, while predation rates in shell were low regardless of predator size or prey density. These differential predation rates yielded a type III functional response in sand but a type I functional response in shell habitat. Crypsis of prey crabs was generally high and did not change in the presence of predators. Predator foraging activity was reduced in shell and may be an adaptive behavior to balance foraging efficiency and susceptibility to larger predators. Our results demonstrate that early benthic phase blue king crabs are cannibalistic between cohorts in the laboratory and that shell material is extremely effective for reducing encounter rates with conspecific predators. The distribution and abundance of such habitat may be important for recruitment success in some populations. Future studies should compare benthic habitat and species assemblages in areas with variable abundances, such as the Pribilof Islands and Saint Matthew Island in the eastern Bering Sea, to better understand possible mechanisms for recruitment variability. PMID:24558414

Inter-cohort cannibalism of early benthic phase blue king crabs (Paralithodes platypus): alternate foraging strategies in different habitats lead to different functional responses.

PubMed

Daly, Benjamin; Long, W Christopher

2014-01-01

Blue king crabs (Paralithodes platypus) are commercially and ecologically important in Alaska, USA, but population abundances have fluctuated over the past several decades likely resulting from a combination of environmental and biological factors, including recruitment variability. Cannibalism between cohorts may be a source of mortality limiting recruitment success in the wild, but the degree of inter-cohort cannibalism is unknown for early benthic phase blue king crabs. In laboratory experiments, we evaluated the effects of habitat type (sand and shell) on the predator functional response and foraging behavior of year-1 blue king crabs as predators of year-0 conspecifics and examined the effects of predator presence on crypsis of prey crabs. In sand, consumption rates increased with predator size and prey density until satiation, while predation rates in shell were low regardless of predator size or prey density. These differential predation rates yielded a type III functional response in sand but a type I functional response in shell habitat. Crypsis of prey crabs was generally high and did not change in the presence of predators. Predator foraging activity was reduced in shell and may be an adaptive behavior to balance foraging efficiency and susceptibility to larger predators. Our results demonstrate that early benthic phase blue king crabs are cannibalistic between cohorts in the laboratory and that shell material is extremely effective for reducing encounter rates with conspecific predators. The distribution and abundance of such habitat may be important for recruitment success in some populations. Future studies should compare benthic habitat and species assemblages in areas with variable abundances, such as the Pribilof Islands and Saint Matthew Island in the eastern Bering Sea, to better understand possible mechanisms for recruitment variability.

The varying stability of benthic homes: hydrologic regime and sediment supply control the timing and intensity of bed mobility

NASA Astrophysics Data System (ADS)

Pfeiffer, A.; Finnegan, N. J.

2017-12-01

Gravel river beds provide an ephemeral architecture for the benthic inhabitants of river ecosystems. Periphyton and benthic macroinvertebrates that live on or within the gravel are subject to catastrophic disruption upon mobilization of the surface gravel during floods. Because sediment supply varies by orders of magnitude across North America, and rivers have adjusted to convey their imposed loads, river bed surface mobility varies enormously. Climate also varies widely across the continent, yielding a range of flood timing, duration, and intermittency. Together, the differences in sediment supply and hydrologic patterns result in diverse regimes of benthic habitat stability. To quantitatively characterize these regimes, we calculate decades-scale time series of estimated bed surface mobility using sediment transport equations (Wilcock and Crowe, 2003). The method requires measurements of the bed surface grainsize distribution, channel slope, and standard USGS stream gauging records. We calculate the fraction of the bed surface grain size distribution that is mobile at any given flow, as well as the intensity of transport. We use the time series of bed mobility to compare between rivers and regions. In many snowmelt-dominated rivers in Idaho, a period of moderate bed mobility (W* > 0.002) generally occurs during the annual melt, and can last for days. In rivers draining the central and northern Appalachians, bed mobility is comparatively rare and occurs during short duration floods. Rivers on the tectonically active West Coast tend to experience bed mobility during most winter storms, with brief (hours long) periods of high transport rates (W* > 0.02) during storm peaks. The timing and intensity of bed mobility varies with hydrologic regime and sediment supply; these contrasts in bed mobility lead to diverse structural templates for river ecosystems.

Isothermal dendritic growth: A low gravity experiment

NASA Technical Reports Server (NTRS)

Glicksman, M. E.; Hahn, R. C.; Lograsso, T. A.; Rubinstein, E. R.; Selleck, M. E.; Winsa, E.

1988-01-01

The Isothermal Dendritic Growth Experiment is an active crystal growth experiment designed to test dendritic growth theory at low undercoolings where convection prohibits such studies at 1 g. The experiment will be essentially autonomous, though limited in-flight interaction through a computer interface is planned. One of the key components of the apparatus will be a crystal growth chamber capable of achieving oriented single crystal dendritic growth. Recent work indicates that seeding the chamber with a crystal of the proper orientation will not, in and of itself, be sufficient to meet this requirement. Additional flight hardware and software required for the STS flight experiment are currently being developed at NASA Lewis Research Center and at Rensselaer Polytechnic Institute.

Super-family P2 C-96-125 observed by Japan-URSS Joint Emulsion Chamber Experiment

NASA Technical Reports Server (NTRS)

Shibuya, E. H.

1985-01-01

A detailed description of the event detected in the second chamber of Japan-URSS Collaboration is presented. A preliminary description was already published and from that time a careful microscopic scanning was carried out.

Experimental apparatus with full optical access for combustion experiments with laminar flames from a single circular nozzle at elevated pressures.

PubMed

Joo, Peter H; Gao, Jinlong; Li, Zhongshan; Aldén, Marcus

2015-03-01

The design and features of a high pressure chamber and burner that is suitable for combustion experiments at elevated pressures are presented. The high pressure combustion apparatus utilizes a high pressure burner that is comprised of a chamber burner module and an easily accessible interchangeable burner module to add to its flexibility. The burner is well suited to study both premixed and non-premixed flames. The optical access to the chamber is provided through four viewports for direct visual observations and optical-based diagnostic techniques. Auxiliary features include numerous access ports and electrical connections and as a result, the combustion apparatus is also suitable to work with plasmas and liquid fuels. Images of methane flames at elevated pressures up to 25 atm and preliminary results of optical-based measurements demonstrate the suitability of the high pressure experimental apparatus for combustion experiments.

Testing of various membranes for use in a novel sediment porewater isolation chamber for infaunal invertebrate exposure to PCBs.

PubMed

Coleman, Jessica G; Lotufo, Guilherme R; Kennedy, Alan J; Poda, Aimee R; Rushing, Todd S; Ruiz, Carlos E; Bridges, Todd S

2014-07-01

In benthic sediment bioassays, determining the relative contribution to exposure by contaminants in overlying water, porewater, and sediment particles is technically challenging. The purpose of the present study was to assess the potential for membranes to be utilized as a mechanism to allow freely dissolved hydrophobic organic contaminants into a pathway isolation exposure chamber (PIC) while excluding all sediment particles and dissolved organic carbon (DOC). This investigation was conducted in support of a larger effort to assess contaminant exposure pathways to benthos. While multiple passive samplers exist for estimating concentrations of contaminants in porewater such as those using solid-phase micro extraction (SPME) and polyoxymethylene (POM), techniques to effectively isolate whole organism exposure to porewater within a sediment system are not available. We tested the use of four membranes of different pore sizes (0.1-1.2μm) including nylon, polycarbonate, polyethylsulfone, and polytetrafluoroethylene with a hydrophilic coating. Exposures included both diffusion of radiolabeled and non-labeled contaminants across membranes from aqueous, sediment slurry, and whole sediment sources to assess and evaluate the best candidate membrane. Data generated from the present study was utilized to select the most suitable membrane for use in the larger bioavailability project which sought to assess the relevance of functional ecology in bioavailability of contaminated sediments at remediation sites. The polytetrafluoroethylene membrane was selected for use in the PIC, although exclusion of dissolved organic carbon was not achieved. Published by Elsevier Ltd.

Linkages between benthic macroinvertebrate assemblages and landscape stressors in the US Great Lakes

EPA Science Inventory

We used multiple linear regression analysis to investigate relationships between benthic macroinvertebrate assemblages in the nearshore region of the Laurentian Great Lakes and landscape characteristics in adjacent watersheds. Benthic invertebrate data were obtained from the 201...

Origin of Gamma-Ray Families Accompanied by Halos and Detected in Experiments with X-Ray Emulsion Chambers

NASA Astrophysics Data System (ADS)

Puchkov, V. S.; Pyatovsky, S. E.

2018-03-01

The phenomenon of gamma-ray families featuring halos that is observed in an experiment with x-ray emulsion chambers (XREC) in the Pamir experiment and in other XREC experiments is explained. The experimental properties of halos are analyzed via a comparison with the results of their simulation. It is shown that gamma-ray families featuring halos are predominantly produced (more than 96% of them) by protons and heliumnuclei. This makes it possible to employ the experimental properties of halos to estimate the fraction of protons and helium nuclei in the mass composition of primary cosmic radiation.

Impact of Propene on Secondary Organic Aerosol Formation from m-Xylene

DOE Office of Scientific and Technical Information (OSTI.GOV)

Song, Chen; Na, Kwangsam; Warren, Bethany

2007-10-15

Propene is widely used in smog chamber experiments to increase the hydroxyl radical (OH) level based on the assumption that the formation of secondary organic aerosol (SOA) from parent hydrocarbon is unaffected. A series ofm-xylene/NOx photooxidation experiments were conducted in the presence of propene in the University of California CECERT atmospheric chamber facility. The experimental data are compared with previousm-xylene/NOx photooxidation work performed in the same chamber facility in the absence of propene (Song et al. Environ. Sci. Technol. 2005, 39, 3143-3149). The result shows that, for similar initial conditions, experiments with propene have lower reaction rates of m-xylene thanmore » those without propene, which indicates that propene reduces OH in the system. Furthermore, experiments with propene showed more than 15% reduction in SOA yield compared to experiments in the absence of propene. Additional experiments ofm-xylene/NOx with CO showed similar trends of suppressing OH and SOA formation. These results indicate that SOA from m-xylene/NOx photooxidation is strongly dependent on the OH level present, which provides evidence for the critical role of OH in SOA formation from aromatic hydrocarbons.« less

Benthic biological and biogeochemical patterns and processes across an oxygen minimum zone (Pakistan margin, NE Arabian Sea)

NASA Astrophysics Data System (ADS)

Cowie, Gregory L.; Levin, Lisa A.

2009-03-01

Oxygen minimum zones (OMZs) impinging on continental margins present sharp gradients ideal for testing environmental factors thought to influence C cycling and other benthic processes, and for identifying the roles that biota play in these processes. Here we introduce the objectives and initial results of a multinational research program designed to address the influences of water depth, the OMZ (˜150-1300 m), and organic matter (OM) availability on benthic communities and processes across the Pakistan Margin of the Arabian Sea. Hydrologic, sediment, and faunal characterizations were combined with in-situ and shipboard experiments to quantify and compare biogeochemical processes and fluxes, OM burial efficiency, and the contributions of benthic communities, across the OMZ. In this introductory paper, we briefly review previous related work in the Arabian Sea, building the rationale for integrative biogeochemical and ecological process studies. This is followed by a summary of individual volume contributions and a brief synthesis of results. Five primary stations were studied, at 140, 300, 940, 1200 and 1850 m water depth, with sampling in March-May (intermonsoon) and August-October (late-to-postmonsoon) 2003. Taken together, the contributed papers demonstrate distinct cross-margin gradients, not only in oxygenation and sediment OM content, but in benthic community structure and function, including microbial processes, the extent of bioturbation, and faunal roles in C cycling. Hydrographic studies demonstrated changes in the intensity and extent of the OMZ during the SW monsoon, with a shoaling of the upper OMZ boundary that engulfed the previously oxygenated 140-m site. Oxygen profiling and microbial process rate determinations demonstrated dramatic differences in oxygen penetration and consumption across the margin, and in the relative importance of anaerobic processes, but surprisingly little seasonal change. A broad maximum in sediment OM content occurred on the upper slope, roughly coincident with the OMZ; but the otherwise poor correlation with bottom-water oxygen concentrations indicated that other factors are important in determining sediment OM distributions. Downcore profiles generally showed little clear evidence of in-situ OM alteration, and there was little sign of OM enrichment resulting from the southwest monsoon in sediments collected in the late-to-postmonsoon sampling. This is interpreted to be due to rapid cycling of labile OM. Organic geochemical studies confirmed that sediment OM is overwhelmingly of marine origin across the margin, but also that it is heavily altered, with only small changes in degradation state across the OMZ. More negative stable C isotopic compositions in surficial sediments at hypoxic sites within the OMZ core are attributed to a chemosynthetic bacterial imprint. Dramatic changes in benthic community structure occurred across the lower OMZ transition, apparently related to OM availability and quality as well as to DO concentrations. High-resolution sampling, biomarkers and isotope tracer studies revealed that oxygen availability appears to exert threshold-type controls on benthic community structure and early faunal C processing. Biomarker studies also provided evidence of faunal influence on sediment OM composition. Together, the results offer strong evidence that benthic fauna at sites across the margin play important roles in the early cycling of sediment OM through differential feeding and bioturbation activities.

The Northern Bering Sea: An Arctic Ecosystem in Change

NASA Astrophysics Data System (ADS)

Grebmeier, J. M.; Cooper, L. W.

2004-12-01

Arctic systems can be rich and diverse habitats for marine life in spite of the extreme cold environment. Benthic faunal populations and associated biogeochemical cycling processes are influenced by sea-ice extent, seawater hydrography (nutrients, salinity, temperature, currents), and water column production. Benthic organisms on the Arctic shelves and margins are long-term integrators of overlying water column processes. Because these organisms have adapted to living at cold extremes, it is reasonable to expect that these communities will be among the most susceptible to climate warming. Recent observations show that Arctic sea ice in the North American Arctic is melting and retreating northward earlier in the season and the timing of these events can have dramatic impacts on the biological system. Changes in overlying primary production, pelagic-benthic coupling, and benthic production and community structure can have cascading effects to higher trophic levels, particularly benthic feeders such as walruses, gray whales, and diving seaducks. Recent indicators of contemporary Arctic change in the northern Bering Sea include seawater warming and reduction in ice extent that coincide with our time-series studies of benthic clam population declines in the shallow northern Bering shelf in the 1990's. In addition, declines in benthic amphipod populations have also likely influenced the movement of feeding gray whales to areas north of Bering Strait during this same time period. Finally a potential consequence of seawater warming and reduced ice extent in the northern Bering Sea could be the northward movement of bottom feeding fish currently in the southern Bering Sea that prey on benthic fauna. This would increase the feeding pressure on the benthic prey base and enhance competition for this food source for benthic-feeding marine mammals and seabirds. This presentation will outline recent biological changes observed in the northern Bering Sea ecosystem as documented in a 20-yr environmental time-series in the Bering Strait region.

Environmental Drivers of Benthic Flux Variation and Ecosystem Functioning in Salish Sea and Northeast Pacific Sediments.

PubMed

Belley, Rénald; Snelgrove, Paul V R; Archambault, Philippe; Juniper, S Kim

2016-01-01

The upwelling of deep waters from the oxygen minimum zone in the Northeast Pacific from the continental slope to the shelf and into the Salish Sea during spring and summer offers a unique opportunity to study ecosystem functioning in the form of benthic fluxes along natural gradients. Using the ROV ROPOS we collected sediment cores from 10 sites in May and July 2011, and September 2013 to perform shipboard incubations and flux measurements. Specifically, we measured benthic fluxes of oxygen and nutrients to evaluate potential environmental drivers of benthic flux variation and ecosystem functioning along natural gradients of temperature and bottom water dissolved oxygen concentrations. The range of temperature and dissolved oxygen encountered across our study sites allowed us to apply a suite of multivariate analyses rarely used in flux studies to identify bottom water temperature as the primary environmental driver of benthic flux variation and organic matter remineralization. Redundancy analysis revealed that bottom water characteristics (temperature and dissolved oxygen), quality of organic matter (chl a:phaeo and C:N ratios) and sediment characteristics (mean grain size and porosity) explained 51.5% of benthic flux variation. Multivariate analyses identified significant spatial and temporal variation in benthic fluxes, demonstrating key differences between the Northeast Pacific and Salish Sea. Moreover, Northeast Pacific slope fluxes were generally lower than shelf fluxes. Spatial and temporal variation in benthic fluxes in the Salish Sea were driven primarily by differences in temperature and quality of organic matter on the seafloor following phytoplankton blooms. These results demonstrate the utility of multivariate approaches in differentiating among potential drivers of seafloor ecosystem functioning, and indicate that current and future predictive models of organic matter remineralization and ecosystem functioning of soft-muddy shelf and slope seafloor habitats should consider bottom water temperature variation. Bottom temperature has important implications for estimates of seasonal and spatial benthic flux variation, benthic-pelagic coupling, and impacts of predicted ocean warming at high latitudes.

Compliance of secondary production and eco-exergy as indicators of benthic macroinvertebrates assemblages' response to canopy cover conditions in Neotropical headwater streams.

PubMed

Linares, Marden Seabra; Callisto, Marcos; Marques, João Carlos

2018-02-01

Riparian vegetation cover influences benthic assemblages structure and functioning in headwater streams, as it regulates light availability and autochthonous primary production in these ecosystems.Secondary production, diversity, and exergy-based indicators were applied in capturing how riparian cover influences the structure and functioning of benthic macroinvertebrate assemblages in tropical headwater streams. Four hypotheses were tested: (1) open canopy will determine the occurrence of higher diversity in benthic macroinvertebrate assemblages; (2) streams with open canopy will exhibit more complex benthic macroinvertebrate communities (in terms of information embedded in the organisms' biomass); (3) in streams with open canopy benthic macroinvertebrate assemblages will be more efficient in using the available resources to build structure, which will be reflected by higher eco-exergy values; (4) benthic assemblages in streams with open canopy will exhibit more secondary productivity. We selected eight non-impacted headwater streams, four shaded and four with open canopy, all located in the Neotropical savannah (Cerrado) of southeastern Brazil. Open canopy streams consistently exhibited significantly higher eco-exergy and instant secondary production values, exemplifying that these streams may support more complex and productive benthic macroinvertebrate assemblages. Nevertheless, diversity indices and specific eco-exergy were not significantly different in shaded and open canopy streams. Since all the studied streams were selected for being considered as non-impacted, this suggests that the potential represented by more available food resources was not used to build a more complex dissipative structure. These results illustrate the role and importance of the canopy cover characteristics on the structure and functioning of benthic macroinvertebrate assemblages in tropical headwater streams, while autochthonous production appears to play a crucial role as food source for benthic macroinvertebrates. This study also highlights the possible application of thermodynamic based indicators as tools to guide environmental managers in developing and implementing policies in the neotropical savannah. Copyright © 2017 Elsevier B.V. All rights reserved.

Ion flow experiments in a multipole discharge chamber

NASA Technical Reports Server (NTRS)

Kaufman, H. R.; Robinson, R. S.; Frisa, L. E.

1982-01-01

It has been customary to assume that ions flow nearly equally in all directions from the ion production region within an electron-bombardment discharge chamber. Ion flow measurements in a multipole discharge chamber have shown that this assumption is not true. In general, the electron current through a magnetic field can alter the electron density, and hence the ion density, in such a way that ions tend to be directed away from the region bounded by the magnetic field. When this mechanism is understood, it becomes evident that many past discharge chamber designs have operated with a preferentially directed flow of ions.

CO2 flux determination by closed-chamber methods can be seriously biased by inappropriate application of linear regression

NASA Astrophysics Data System (ADS)

Kutzbach, L.; Schneider, J.; Sachs, T.; Giebels, M.; Nykänen, H.; Shurpali, N. J.; Martikainen, P. J.; Alm, J.; Wilmking, M.

2007-07-01

Closed (non-steady state) chambers are widely used for quantifying carbon dioxide (CO2) fluxes between soils or low-stature canopies and the atmosphere. It is well recognised that covering a soil or vegetation by a closed chamber inherently disturbs the natural CO2 fluxes by altering the concentration gradients between the soil, the vegetation and the overlying air. Thus, the driving factors of CO2 fluxes are not constant during the closed chamber experiment, and no linear increase or decrease of CO2 concentration over time within the chamber headspace can be expected. Nevertheless, linear regression has been applied for calculating CO2 fluxes in many recent, partly influential, studies. This approach was justified by keeping the closure time short and assuming the concentration change over time to be in the linear range. Here, we test if the application of linear regression is really appropriate for estimating CO2 fluxes using closed chambers over short closure times and if the application of nonlinear regression is necessary. We developed a nonlinear exponential regression model from diffusion and photosynthesis theory. This exponential model was tested with four different datasets of CO2 flux measurements (total number: 1764) conducted at three peatland sites in Finland and a tundra site in Siberia. The flux measurements were performed using transparent chambers on vegetated surfaces and opaque chambers on bare peat surfaces. Thorough analyses of residuals demonstrated that linear regression was frequently not appropriate for the determination of CO2 fluxes by closed-chamber methods, even if closure times were kept short. The developed exponential model was well suited for nonlinear regression of the concentration over time c(t) evolution in the chamber headspace and estimation of the initial CO2 fluxes at closure time for the majority of experiments. CO2 flux estimates by linear regression can be as low as 40% of the flux estimates of exponential regression for closure times of only two minutes and even lower for longer closure times. The degree of underestimation increased with increasing CO2 flux strength and is dependent on soil and vegetation conditions which can disturb not only the quantitative but also the qualitative evaluation of CO2 flux dynamics. The underestimation effect by linear regression was observed to be different for CO2 uptake and release situations which can lead to stronger bias in the daily, seasonal and annual CO2 balances than in the individual fluxes. To avoid serious bias of CO2 flux estimates based on closed chamber experiments, we suggest further tests using published datasets and recommend the use of nonlinear regression models for future closed chamber studies.

Interactions Between Hydropeaking and Thermopeaking Waves and Their Effect on the Benthic Community in Flume Simulations

NASA Astrophysics Data System (ADS)

Bruno, M.; Carolli, M.; Maiolini, B.; Siviglia, A.; Zolezzi, G.

2013-12-01

M. C. Bruno1*, M. Carolli2, B. Maiolini1, A. Siviglia2, Zolezzi, G.2 1 Fondazione Edmund Mach, Research and Innovation Centre. S. Michele all'Adige, I-38010, Italy 2 Department of Civil, Environmental and Mechanical Engineering, University of Trento, I-38100, Trento, Italy * cristina.bruno@fmach.it In Alpine regions, hydroelectricity generation is a key power source and its ability to quickly respond to short-term changes in energy demand makes it an ideal source to meet the needs of the deregulated energy market. This economic need is reflected in the temporal patterns of dam operations with consequences for the water bodies that receive downstream releases in the form of ';hydropeaking', typically consisting of sharp water releases in river reaches below dams. The unsteadiness related to this highly intermittent phenomenon has cascading effects on both biotic and abiotic river resources. Regulation by dams may also significantly affect the thermal regime of riversespecially in mountain areas, where releases from high-elevation reservoirs are often characterized by a markedly different temperature from that of the receiving body, thus causing also sharp water temperature variations, named ';thermopeaking'. While interacting with external forcing, the hydrodynamic and thermal waves propagate downstream with different celerities and a first phase of mutual overlap is followed by a second phase in which the two waves proceed separately. The asynchronous propagation of the two waves produces two distinct but consecutive impacts on the benthic community. Because it is difficult to disentangle the multiple effects of hydropeaking and thermopeaking on benthic macroinvertebrates in experiments conducted in natural conditions, we conducted our studies in an experimental structure of five steel channels directly fed by an alpine stream, the Fersina, a tributary to the Adige River of northern Italy. We simulated two sets of cold and warm thermopeaking waves, and measured the induced responses on benthic macroinvertebrates, i.e., the active (behavioral) and passive (catastrophic) drift. Although the achieved changes in temperature were within the tolerability range for benthic invertebrates, their drift propensity increased threefold and fivefold, and twofold and fourfold in the two cold and two warm thermopeaking experiments, respectively. Drift was probably behavioral, given the immediate responses of invertebrates which seek habitat patches downstream, that are within their temperature tolerance and/or preference levels. Catastrophic and behavioral drift can occur as distinct events in hydropeaking-impacted streams, thus we analyzed the effects of a hydropeaking wave followed by a thermopeaking wave in the same flume. We observed that the slight but abrupt increase in discharge caused an increase in drift of elevenfold the basedrift, but the abrupt decrease in temperature caused a stronger response, of thirty-ninefold the basedrift. Our experimental results suggest that effects of thermopeaking are mixed and synergic with those due to hydropeaking, and in the long-term may alter the longitudinal distribution of benthic communities. Such complex responses should be taken into account in simulation studies, in modelling of aquatic ecosystems and in proposing remediation strategies to hydropeaking-impacted rivers.

Metal contamination in benthic macroinvertebrates in a sub-basin in the southeast of Brazil.

PubMed

Chiba, W A C; Passerini, M D; Tundisi, J G

2011-05-01

Benthic macroinvertebrates have many useful properties that make possible the use of these organisms as sentinel in biomonitoring programmes in freshwater. Combined with the characteristics of the water and sediment, benthic macroinvertebrates are potential indicators of environmental quality. Thus, the spatial occurrence of potentially toxic metals (Al, Zn, Cr, Co, Cu, Fe, Mn and Ni) in the water, sediment and benthic macroinvertebrates samples were investigated in a sub-basin in the southeast of Brazil in the city of São Carlos, São Paulo state, with the aim of verifying the metals and environment interaction with benthic communities regarding bioaccumulation. Hypothetically, there can be contamination by metals in the aquatic environment in the city due to lack of industrial effluent treatment. All samples were analysed by the USEPA adapted method and processed in an atomic absorption spectrophotometer. The sub-basin studied is contaminated by toxic metals in superficial water, sediment and benthic macroinvertebrates. The Bioaccumulation Factor showed a tendency for metal bioaccumulation by the benthic organisms for almost all the metal species. The results show a potential human and ecosystem health risk, contributing to metal contamination studies in aquatic environments in urban areas.

Lake Malawi cichlid evolution along a benthic/limnetic axis.

PubMed

Hulsey, C D; Roberts, R J; Loh, Y-H E; Rupp, M F; Streelman, J T

2013-07-01

Divergence along a benthic to limnetic habitat axis is ubiquitous in aquatic systems. However, this type of habitat divergence has largely been examined in low diversity, high latitude lake systems. In this study, we examined the importance of benthic and limnetic divergence within the incredibly species-rich radiation of Lake Malawi cichlid fishes. Using novel phylogenetic reconstructions, we provided a series of hypotheses regarding the evolutionary relationships among 24 benthic and limnetic species that suggests divergence along this axis has occurred multiple times within Lake Malawi cichlids. Because pectoral fin morphology is often associated with divergence along this habitat axis in other fish groups, we investigated divergence in pectoral fin muscles in these benthic and limnetic cichlid species. We showed that the eight pectoral fin muscles and fin area generally tended to evolve in a tightly correlated manner in the Lake Malawi cichlids. Additionally, we found that larger pectoral fin muscles are strongly associated with the independent evolution of the benthic feeding habit across this group of fish. Evolutionary specialization along a benthic/limnetic axis has occurred multiple times within this tropical lake radiation and has produced repeated convergent matching between exploitation of water column habitats and locomotory morphology.

Optimization and analysis of NF3 in situ chamber cleaning plasmas

NASA Astrophysics Data System (ADS)

Ji, Bing; Yang, James H.; Badowski, Peter R.; Karwacki, Eugene J.

2004-04-01

We report on the optimization and analysis of a dilute NF3 in situ plasma-enhanced chemical vapor deposition chamber cleaning plasma for an Applied Materials P-5000 DxL chamber. Using design of experiments methodology, we identified and optimized operating conditions within the following process space: 10-15 mol % NF3 diluted with helium, 200-400 sccm NF3 flow rate, 2.5-3.5 Torr chamber pressure, and 950 W rf power. Optical emission spectroscopy and Fourier transform infrared spectroscopy were used to endpoint the cleaning processes and to quantify plasma effluent emissions, respectively. The results demonstrate that dilute NF3-based in situ chamber cleaning can be a viable alternative to perfluorocarbon-based in situ cleans with added benefits. The relationship between chamber clean time and fluorine atom density in the plasma is also investigated.

Biofilm and Diatom Succession on Polyethylene (PE) and Biodegradable Plastic Bags in Two Marine Habitats: Early Signs of Degradation in the Pelagic and Benthic Zone?

PubMed Central

Laforsch, Christian; Weber, Miriam

2015-01-01

The production of biodegradable plastic is increasing. Given the augmented littering of these products an increasing input into the sea is expected. Previous laboratory experiments have shown that degradation of plastic starts within days to weeks. Little is known about the early composition and activity of biofilms found on biodegradable and conventional plastic debris and its correlation to degradation in the marine environment. In this study we investigated the early formation of biofilms on plastic shopper bags and its consequences for the degradation of plastic. Samples of polyethylene and biodegradable plastic were tested in the Mediterranean Sea for 15 and 33 days. The samples were distributed equally to a shallow benthic (sedimentary seafloor at 6 m water depth) and a pelagic habitat (3 m water depth) to compare the impact of these different environments on fouling and degradation. The amount of biofilm increased on both plastic types and in both habitats. The diatom abundance and diversity differed significantly between the habitats and the plastic types. Diatoms were more abundant on samples from the pelagic zone. We anticipate that specific surface properties of the polymer types induced different biofilm communities on both plastic types. Additionally, different environmental conditions between the benthic and pelagic experimental site such as light intensity and shear forces may have influenced unequal colonisation between these habitats. The oxygen production rate was negative for all samples, indicating that the initial biofilm on marine plastic litter consumes oxygen, regardless of the plastic type or if exposed in the pelagic or the benthic zone. Mechanical tests did not reveal degradation within one month of exposure. However, scanning electron microscopy (SEM) analysis displayed potential signs of degradation on the plastic surface, which differed between both plastic types. This study indicates that the early biofilm formation and composition are affected by the plastic type and habitat. Further, it reveals that already within two weeks biodegradable plastic shows signs of degradation in the benthic and pelagic habitat. PMID:26394047

Biofilm and Diatom Succession on Polyethylene (PE) and Biodegradable Plastic Bags in Two Marine Habitats: Early Signs of Degradation in the Pelagic and Benthic Zone?

PubMed

Eich, Andreas; Mildenberger, Tobias; Laforsch, Christian; Weber, Miriam

2015-01-01

The production of biodegradable plastic is increasing. Given the augmented littering of these products an increasing input into the sea is expected. Previous laboratory experiments have shown that degradation of plastic starts within days to weeks. Little is known about the early composition and activity of biofilms found on biodegradable and conventional plastic debris and its correlation to degradation in the marine environment. In this study we investigated the early formation of biofilms on plastic shopper bags and its consequences for the degradation of plastic. Samples of polyethylene and biodegradable plastic were tested in the Mediterranean Sea for 15 and 33 days. The samples were distributed equally to a shallow benthic (sedimentary seafloor at 6 m water depth) and a pelagic habitat (3 m water depth) to compare the impact of these different environments on fouling and degradation. The amount of biofilm increased on both plastic types and in both habitats. The diatom abundance and diversity differed significantly between the habitats and the plastic types. Diatoms were more abundant on samples from the pelagic zone. We anticipate that specific surface properties of the polymer types induced different biofilm communities on both plastic types. Additionally, different environmental conditions between the benthic and pelagic experimental site such as light intensity and shear forces may have influenced unequal colonisation between these habitats. The oxygen production rate was negative for all samples, indicating that the initial biofilm on marine plastic litter consumes oxygen, regardless of the plastic type or if exposed in the pelagic or the benthic zone. Mechanical tests did not reveal degradation within one month of exposure. However, scanning electron microscopy (SEM) analysis displayed potential signs of degradation on the plastic surface, which differed between both plastic types. This study indicates that the early biofilm formation and composition are affected by the plastic type and habitat. Further, it reveals that already within two weeks biodegradable plastic shows signs of degradation in the benthic and pelagic habitat.

Advanced space propulsion thruster research

NASA Technical Reports Server (NTRS)

Wilbur, P. J.

1981-01-01

Experiments showed that stray magnetic fields can adversely affect the capacity of a hollow cathode neutralizer to couple to an ion beam. Magnetic field strength at the neutralizer cathode orifice is a crucial factor influencing the coupling voltage. The effects of electrostatic accelerator grid aperture diameters on the ion current extraction capabilities were examined experimentally to describe the divergence, deflection, and current extraction capabilities of grids with the screen and accelerator apertures displaced relative to one another. Experiments performed in orificed, mercury hollow cathodes support the model of field enhanced thermionic electron mission from cathode inserts. Tests supported the validity of a thermal model of the cathode insert. A theoretical justification of a Saha equation model relating cathode plasma properties is presented. Experiments suggest that ion loss rates to discharge chamber walls can be controlled. A series of new discharge chamber magnetic field configurations were generated in the flexible magnetic field thruster and their effect on performance was examined. A technique used in the thruster to measure ion currents to discharge chamber walls is described. Using these ion currents the fraction of ions produced that are extracted from the discharge chamber and the energy cost of plasma ions are computed.

Protein crystal growth tray assembly

NASA Technical Reports Server (NTRS)

Carter, Daniel C. (Inventor); Miller, Teresa Y. (Inventor)

1992-01-01

A protein crystal growth tray assembly includes a tray that has a plurality of individual crystal growth chambers. Each chamber has a movable pedestal which carries a protein crystal growth compartment at an upper end. The several pedestals for each tray assembly are ganged together for concurrent movement so that the solutions in the various pedestal growth compartments can be separated from the solutions in the tray's growth chambers until the experiment is to be activated.

Spatial and temporal distributions of benthic green macroalgae in Yaquina bay, Oregon

EPA Science Inventory

Coastal estuaries of Oregon, USA, typically support relatively large accumulations of benthic green macroalgae (BGM) during the summer/early fall growing season. This raises questions regarding possible (positive and negative) effects on eelgrass and benthic epifauna and infauna...

Comparison of different proxies using in situ measurements in the benthic foraminifera genus Uvigerina: an example from the Santa Monica Basin.

NASA Astrophysics Data System (ADS)

Balestra, B.; Orland, I. J.; White, S. M.; Fessenden-Rahn, J.; Rahn, T. A.; Paytan, A.; Valley, J. W.

2016-12-01

Mg/Ca ratios and oxygen isotope ratios (δ18O) of foraminiferal calcite are two of the most used geochemical proxies for paleoceanographic reconstructions. The constraint of seawater temperature and salinity from the Mg/Ca and δ18O compositions of foraminiferal calcite present the possibility of reconstructing past changes in glacial ice volume, local precipitation/evaporation, temperature and water mass density. Implementing spatial and temporal changes in these variables is necessary to understand linked paleo-oceanographic and paleo-climate events, and to predict the nature and rate of future climate change. We performed two sets of analysis: (1) δ18O using a CAMECA 1280 at WiscSIMS (10 µm spot) and (2) Mg/Ca and Sr/Ca using Laser Ablation (LA) ICP (at University California Santa Cruz, (13 and 50 µm spot) on the same individuals belonging to the benthic foraminifera genus Uvigerina. We analyzed several specimens from Site ODP 1015 in the California Margin, a region characterized by strong seasonal upwelling. In particular, we have analyzed individuals from three different time slices within the last 2000 years (industrial time) and three within the Younger Dryas (YD) (pre-industrial time). Comparisons between different individuals and within the same individual in the different chambers were made. δ18O values range between 0.1 and 2.6 ‰ PDB in the last 2000 years and between 0.8 and 3.4 ‰ in the YD. Mg/Ca values range between 0.65 and 1.40 in the last 2000 and between 0.60 and 1.65 in the YD. These preliminary results show significant variability without clear patterns. The implication of these results and methodology related advantages and limitations will be discussed.

Determining stressor presence in streams receiving urban and agricultural runoff: development of a benthic in situ toxicity identification evaluation method.

PubMed

Custer, Kevin W; Burton, G Allen; Coelho, Ricardo S; Smith, Preston R

2006-09-01

Determining toxicity in streams during storm-water runoff can be highly problematic because of the fluctuating exposures of a multitude of stressors and the difficulty of linking these dynamic exposures with biological effects. An underlying problem with assessing storm-water quality is determining if toxicity exists and then which contaminant is causing the toxicity. The goal of this research is to provide an alternative to standard toxicity testing methods by incorporating an in situ toxicity identification evaluation (TIE) approach. A benthic in situ TIE bioassay (BiTIE) was developed for separating key chemical classes of stressors in streams during both low- and high-flow events to help discern between point and nonpoint sources of pollution. This BiTIE method allows for chemical class fractionation through the use of resins, and these resins are relatively specific for removing nonpolar organics (Dowex Optipore), ammonia (zeolite), and polywool (control). Three indigenous aquatic insects, a mayfly (Isonychia spp.), a caddisfly (Hydropsyche spp.), and a water beetle (Psephenus herricki), were placed in BiTIE chambers that were filled with natural substrates. Acute 96-h exposures were conducted at Honey Creek, New Carlisle, Ohio, USA (reference site), and Little Beavercreek, Beavercreek, Ohio, USA (impaired site). At both sites, significant (p < 0.025) stressor responses were observed using multiple species with polywool or no resin (control) treatments exhibiting < 80% survival and resin treatments with >80% survival. The BiTIE method showed stressor-response relationships in both runoff and base flow events during 96-h exposures. The method appears useful for discerning stressors with indigenous species in situ.

Cyanobacterial life at low O(2): community genomics and function reveal metabolic versatility and extremely low diversity in a Great Lakes sinkhole mat.

PubMed

Voorhies, A A; Biddanda, B A; Kendall, S T; Jain, S; Marcus, D N; Nold, S C; Sheldon, N D; Dick, G J

2012-05-01

Cyanobacteria are renowned as the mediators of Earth's oxygenation. However, little is known about the cyanobacterial communities that flourished under the low-O(2) conditions that characterized most of their evolutionary history. Microbial mats in the submerged Middle Island Sinkhole of Lake Huron provide opportunities to investigate cyanobacteria under such persistent low-O(2) conditions. Here, venting groundwater rich in sulfate and low in O(2) supports a unique benthic ecosystem of purple-colored cyanobacterial mats. Beneath the mat is a layer of carbonate that is enriched in calcite and to a lesser extent dolomite. In situ benthic metabolism chambers revealed that the mats are net sinks for O(2), suggesting primary production mechanisms other than oxygenic photosynthesis. Indeed, (14)C-bicarbonate uptake studies of autotrophic production show variable contributions from oxygenic and anoxygenic photosynthesis and chemosynthesis, presumably because of supply of sulfide. These results suggest the presence of either facultatively anoxygenic cyanobacteria or a mix of oxygenic/anoxygenic types of cyanobacteria. Shotgun metagenomic sequencing revealed a remarkably low-diversity mat community dominated by just one genotype most closely related to the cyanobacterium Phormidium autumnale, for which an essentially complete genome was reconstructed. Also recovered were partial genomes from a second genotype of Phormidium and several Oscillatoria. Despite the taxonomic simplicity, diverse cyanobacterial genes putatively involved in sulfur oxidation were identified, suggesting a diversity of sulfide physiologies. The dominant Phormidium genome reflects versatile metabolism and physiology that is specialized for a communal lifestyle under fluctuating redox conditions and light availability. Overall, this study provides genomic and physiologic insights into low-O(2) cyanobacterial mat ecosystems that played crucial geobiological roles over long stretches of Earth history. © 2012 Blackwell Publishing Ltd.

Benthic invertebrates of fixed sites in the western Lake Michigan drainages, Wisconsin and Michigan, 1993-95

USGS Publications Warehouse

Lenz, Bernard N.; Rheaume, S.J.

2000-01-01

This report describes the variability in family-level benthic-invertebrate population data and the reliability of the data as a water-quality indicator for 11 fixed surface-water sites in the Western Lake Michigan Drainages study area of the National Water-Quality Assessment Program. Benthic-invertebrate-community measures were computed for the following: number of individuals, Hilsenhoff’s Family-Level Biotic Index, number and percent EPT (Ephemeroptera, Plecoptera, and Tricoptera), Margalef’s Diversity Index, and mean tolerance value. Relations between these measures and environmental setting, habitat, and of chemical water quality are examined. Benthic-invertebrate communities varied greatly among fixed sites and within individual streams among multiple-reach and multiple-year sampling. The variations between multiple reaches and years were sometimes larger than those found between different fixed sites. Factors affecting benthic invertebrates included both habitat and chemical quality. Generally, fixed-site streams with the highest diversity, greatest number of benthic invertebrates, and those at which community measures indicated the best water quality also had the best habitat and chemical quality. Variations among reaches are most likely related to differences in habitat. Variations among years are most likely related to climatic changes, which create variations in flow and/or chemical quality. The variability in the data analyzed in this study shows how benthic invertebrates are affected by differences in both habitat and water quality, making them useful indicators of stream health; however, a single benthic-invertebrate sample alone cannot be relied upon to accurately describe water quality of the streams in this study. Benthic-invertebrate data contributed valuable information on the biological health of the 11 fixed sites when used as one of several data sources for assessing water quality.

Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

NASA Astrophysics Data System (ADS)

Stief, P.

2013-12-01

Invertebrate animals that live at the bottom of aquatic ecosystems (i.e., benthic macrofauna) are important mediators between nutrients in the water column and microbes in the benthos. The presence of benthic macrofauna stimulates microbial nutrient dynamics through different types of animal-microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal-microbe interactions in the benthos of aquatic ecosystems: (i) ecosystem engineering, (ii) grazing, and (iii) symbiosis. Their specific contributions to the turnover of fixed nitrogen (mainly nitrate and ammonium) and the emission of the greenhouse gas nitrous oxide are evaluated. Published data indicate that ecosystem engineering by sediment-burrowing macrofauna stimulates benthic nitrification and denitrification, which together allows fixed nitrogen removal. However, the release of ammonium from sediments is enhanced more strongly than the sedimentary uptake of nitrate. Ecosystem engineering by reef-building macrofauna increases nitrogen retention and ammonium concentrations in shallow aquatic ecosystems, but allows organic nitrogen removal through harvesting. Grazing by macrofauna on benthic microbes apparently has small or neutral effects on nitrogen cycling. Animal-microbe symbioses provide abundant and distinct benthic compartments for a multitude of nitrogen-cycle pathways. Recent studies reveal that ecosystem engineering, grazing, and symbioses of benthic macrofauna significantly enhance nitrous oxide emission from shallow aquatic ecosystems. The beneficial effect of benthic macrofauna on fixed nitrogen removal through coupled nitrification-denitrification can thus be offset by the concurrent release of (i) ammonium that stimulates aquatic primary production and (ii) nitrous oxide that contributes to global warming. Overall, benthic macrofauna intensifies the coupling between benthos, pelagial, and atmosphere through enhanced turnover and transport of nitrogen.

Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

NASA Astrophysics Data System (ADS)

Stief, P.

2013-07-01

Invertebrate animals that live at the bottom of aquatic ecosystems (i.e., benthic macrofauna) are important mediators between nutrients in the water column and microbes in the benthos. The presence of benthic macrofauna stimulates microbial nutrient dynamics through different types of animal-microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal-microbe interactions in the benthos of aquatic ecosystems: (i) ecosystem engineering, (ii) grazing, and (iii) symbiosis. Their specific contributions to the turnover of fixed nitrogen (mainly nitrate and ammonium) and the emission of the greenhouse gas nitrous oxide are evaluated. Published data indicate that ecosystem engineering by sediment-burrowing macrofauna stimulates benthic nitrification and denitrification, which together allows fixed nitrogen removal. However, the release of ammonium from sediments often is enhanced even more than the sedimentary uptake of nitrate. Ecosystem engineering by reef-building macrofauna increases nitrogen retention and ammonium concentrations in shallow aquatic ecosystems, but allows organic nitrogen removal through harvesting. Grazing by macrofauna on benthic microbes apparently has small or neutral effects on nitrogen cycling. Animal-microbe symbioses provide abundant and distinct benthic compartments for a multitude of nitrogen-cycle pathways. Recent studies revealed that ecosystem engineering, grazing, and symbioses of benthic macrofauna significantly enhance nitrous oxide emission from shallow aquatic ecosystems. The beneficial effect of benthic macrofauna on fixed nitrogen removal through coupled nitrification-denitrification can thus be offset by the concurrent release of (i) ammonium that stimulates aquatic primary production and (ii) nitrous oxide that contributes to global warming. Overall, benthic macrofauna intensifies the coupling between benthos, pelagial, and atmosphere through enhanced turnover and transport of nitrogen.

Trace metals, PCBs, and PAHs in benthic (epipelic) diatoms from intertidal sediments; a pilot study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stronkhorst, J.; Misdorp, R.; Vos, P.C.

1994-06-01

Intertidal sediments in many estuaries around the world have a history of contamination resulting from long term discharges of industrial, agricultural and domestic waste effluents. These contaminated sediments are now regarded as a major source of toxicants for bottom-related organisms which, in turn, may pass on certain contaminants (e.g. methylmercury, polychlorinated biphenyls (PCBs)) to organisms higher in the foodchain. Many studies have been conducted on the contamination of benthic macrofauna, estuarine fish and birds, but to our knowledge no research has yet been carried out on benthic diatoms which form the lowest trophic level of an intertidal ecosystem. Research onmore » the effects of micro-contaminants on primary producers in marine ecosystems is mainly performed with phytoplankton. In the estuaries of temperate regions, benthic diatoms make a significant contribution to primary production in the ecosystem and are predated especially by deposit feeding Polychaete and Mollusca. Knowledge of the level of contamination in benthic diatoms is of major importance to recognize possible effects on growth rate and species composition of the benthic diatom populations and to understand the accumulation of toxicants into the foodchain. For chemical analysis it is difficult to obtain [open quote]pure[close quote] samples of benthic diatoms because they form part of the sediment. A similar problem occurs with the sampling of phytoplankton in turbid estuarine waters. The aim of this pilot study was (a) to improve a trap technique to collect pure samples of benthic diatoms of at least 2 gram dry weight for analysis of trace metals, PCBs and polyaromatic hydrocarbons (PAHs) and (b) to compare the concentrations in benthic diatoms with levels in sediment and some bottom-related organisms. 16 refs., 2 figs., 2 tabs.« less

Trawl disturbance on benthic communities: chronic effects and experimental predictions.

PubMed

Hinz, Hilmar; Prieto, Virginia; Kaiser, Michel J

2009-04-01

Bottom trawling has widespread impacts on benthic communities and habitats. While the direct impacts of trawl disturbances on benthic communities have been extensively studied, the consequences from long-term chronic disturbances are less well understood. The response of benthic macrofauna to chronic otter-trawl disturbance from a Nephrops norvegicus (Norway lobster) fishery was investigated along a gradient of fishing intensity over a muddy fishing ground in the northeastern Irish Sea. Chronic otter trawling had a significant, negative effect on benthic infauna abundance, biomass, and species richness. Benthic epifauna abundance and species richness also showed a significant, negative response, while no such effect was evident for epibenthic biomass. Furthermore, chronic trawl disturbance led to clear changes in community composition of benthic infauna and epifauna. The results presented indicate that otter-trawl impacts are cumulative and can lead to profound changes in benthic communities, which may have far-reaching implications for the integrity of marine food webs. Studies investigating the short-term effects of fishing manipulations previously concluded that otter trawling on muddy substrates had only modest effects on the benthic biota. Hence, the results presented by this study highlight that data from experimental studies can not be readily extrapolated to an ecosystem level and that subtle cumulative effects may only become apparent when fishing disturbances are examined over larger spatial and temporal scales. Furthermore, this study shows that data on chronic effects of bottom trawling on the benthos will be vital in informing the recently advocated move toward an ecosystem approach in fisheries management. As bottom-trawl fisheries are expanding into ever deeper muddy habitats, the results presented here are an important step toward understanding the global ecosystem effects of bottom trawling.

Large Scale Flame Spread Environmental Characterization Testing

NASA Technical Reports Server (NTRS)

Clayman, Lauren K.; Olson, Sandra L.; Gokoghi, Suleyman A.; Brooker, John E.; Ferkul, Paul V.; Kacher, Henry F.

2013-01-01

Under the Advanced Exploration Systems (AES) Spacecraft Fire Safety Demonstration Project (SFSDP), as a risk mitigation activity in support of the development of a large-scale fire demonstration experiment in microgravity, flame-spread tests were conducted in normal gravity on thin, cellulose-based fuels in a sealed chamber. The primary objective of the tests was to measure pressure rise in a chamber as sample material, burning direction (upward/downward), total heat release, heat release rate, and heat loss mechanisms were varied between tests. A Design of Experiments (DOE) method was imposed to produce an array of tests from a fixed set of constraints and a coupled response model was developed. Supplementary tests were run without experimental design to additionally vary select parameters such as initial chamber pressure. The starting chamber pressure for each test was set below atmospheric to prevent chamber overpressure. Bottom ignition, or upward propagating burns, produced rapid acceleratory turbulent flame spread. Pressure rise in the chamber increases as the amount of fuel burned increases mainly because of the larger amount of heat generation and, to a much smaller extent, due to the increase in gaseous number of moles. Top ignition, or downward propagating burns, produced a steady flame spread with a very small flat flame across the burning edge. Steady-state pressure is achieved during downward flame spread as the pressure rises and plateaus. This indicates that the heat generation by the flame matches the heat loss to surroundings during the longer, slower downward burns. One heat loss mechanism included mounting a heat exchanger directly above the burning sample in the path of the plume to act as a heat sink and more efficiently dissipate the heat due to the combustion event. This proved an effective means for chamber overpressure mitigation for those tests producing the most total heat release and thusly was determined to be a feasible mitigation strategy to incorporate into the microgravity experiment.

A circadian rhythm of conidiation in Neurospora crassa (L-12)

NASA Technical Reports Server (NTRS)

Miyoshi, Yashuhiro

1993-01-01

Two fungi growth chambers containing six growth tubes each are used in this experiment. One chamber is for the space experiment; the other is for the simultaneous ground control experiment. The hyphae of Neurospora crassa band A mutant are inoculated at one end of each tube. Both the chambers are kept at 3 C plus or minus 1.5 C to stop hyphae growth until the Spacelab is activated. After the activation, each chamber is transferred simultaneously to the Spacelab and a phytotron in KSC and kept in continuous light at the same temperature. After about 24 hours of light exposure, each chamber is inserted into a growth chamber bag to keep it in constant darkness. The circadian rhythm of conidiation is initiated by this light to dark transition. After the dark incubation for 5 days at room temperature, both the growth chambers are kept at 3 C plus or minus 1.5 C to stop growth of the hyphae. After the space shuttle lands, both conidiation patterns are compared and analyzed. It has been known that numerous physiological phenomena show circadian rhythms. They are characterized by the fact that the oscillation can persist under constant conditions of light and temperature. Therefore, it has been accepted by most investigators that the generation mechanism of the circadian rhythm is endogeneous. However, one cannot reject the possibility that these rhythms are caused by some geophysical exogeneous factor having a 24-hour period, such as atmospheric pressure, gravity, or electromagnetic radiation. We use Neurospora crassa band A mutual which shows an obvious circadian rhythm in its spore-forming (conidiation) on the ground, and we intend to attempt the conidation of this mutant in the Spacelab where 24-hour periodicity is severely attenuated and to elucidate the effect of the geophysical exogeneous factor in the generation mechanism of the circadian rhythm.

Track chambers based on precision drift tubes housed inside 30 mm mylar pipe

NASA Astrophysics Data System (ADS)

Borisov, A.; Bozhko, N.; Fakhrutdinov, R.; Kozhin, A.; Leontiev, B.; Levin, A.

2014-06-01

We describe drift chambers consisting of 3 layers of 30 mm (OD) drift tubes made of double sided aluminized mylar film with thickness 0.125 mm. A single drift tube is self-supported structure withstanding 350 g tension of 50 microns sense wire located in the tube center with 10 microns precision with respect to end-plug outer surface. Such tubes allow to create drift chambers with small amount of material, construction of such chambers doesn't require hard frames. Twenty six chambers with working area from 0.8 × 1.0 to 2.5 × 2.0 m2 including 4440 tubes have been manufactured for experiments at 70-GeV proton accelerator at IHEP(Protvino).

Propagation of a premixed flame in a divided-chamber combustor

NASA Technical Reports Server (NTRS)

Cattolica, R. J.; Barr, P. K.; Mansour, N. N.

1989-01-01

Experimental observations on the propagation of lean premixed ethylene-air flames in a divided-chamber combustion vessel have been compared with the results of numerical simulations based on a flame sheet-vortex dynamics model in axisymmetric coordinates. Flame speeds were found to increase from 10-24 cm/s as the equivalence ratio was varied from 0.5-0.65 in the experiments. Using the associated increase in gas velocity with equivalence ratio, the estimated Reynolds number in the experiment was changed from 1870 to 8090. Good agreement between experimental and theoretical results was obtained for the prechamber flame propagation rates and for the spatial and temporal development of the flame in the main combustion chamber at the lowest Reynolds number.

Drop dynamics

NASA Technical Reports Server (NTRS)

Elleman, D. D.

1981-01-01

The drop dynamics module is a Spacelab-compatible acoustic positioning and control system for conducting drop dynamics experiments in space. It consists basically of a chamber, a drop injector system, an acoustic positioning system, and a data collection system. The principal means of collecting data is by a cinegraphic camera. The drop is positioned in the center of the chamber by forces created by standing acoustic waves generated in the nearly cubical chamber (about 12 cm on a side). The drop can be spun or oscillated up to fission by varying the phse and amplitude of the acoustic waves. The system is designed to perform its experiments unattended, except for start-up and shutdown events and other unique events that require the attention of the Spacelab payload specialist.

Validation of odor concentration from mechanical-biological treatment piles using static chamber and wind tunnel with different wind speed values.

PubMed

Szyłak-Szydłowski, Mirosław

2017-09-01

The basic principle of odor sampling from surface sources is based primarily on the amount of air obtained from a specific area of the ground, which acts as a source of malodorous compounds. Wind tunnels and flux chambers are often the only available, direct method of evaluating the odor fluxes from small area sources. There are currently no widely accepted chamber-based methods; thus, there is still a need for standardization of these methods to ensure accuracy and comparability. Previous research has established that there is a significant difference between the odor concentration values obtained using the Lindvall chamber and those obtained by a dynamic flow chamber. Thus, the present study compares sampling methods using a streaming chamber modeled on the Lindvall cover (using different wind speeds), a static chamber, and a direct sampling method without any screens. The volumes of chambers in the current work were similar, ~0.08 m 3 . This study was conducted at the mechanical-biological treatment plant in Poland. Samples were taken from a pile covered by the membrane. Measured odor concentration values were between 2 and 150 ou E /m 3 . Results of the study demonstrated that both chambers can be used interchangeably in the following conditions: odor concentration is below 60 ou E /m 3 , wind speed inside the Lindvall chamber is below 0.2 m/sec, and a flow value is below 0.011 m 3 /sec. Increasing the wind speed above the aforementioned value results in significant differences in the results obtained between those methods. In all experiments, the results of the concentration of odor in the samples using the static chamber were consistently higher than those from the samples measured in the Lindvall chamber. Lastly, the results of experiments were employed to determine a model function of the relationship between wind speed and odor concentration values. Several researchers wrote that there are no widely accepted chamber-based methods. Also, there is still a need for standardization to ensure full comparability of these methods. The present study compared the existing methods to improve the standardization of area source sampling. The practical usefulness of the results was proving that both examined chambers can be used interchangeably. Statistically similar results were achieved while odor concentration was below 60 ou E /m 3 and wind speed inside the Lindvall chamber was below 0.2 m/sec. Increasing wind speed over these values results in differences between these methods. A model function of relationship between wind speed and odor concentration value was determined.

Application of multiple index development approaches to benthic invertebrate data from the Virginian Biogeographic Province

EPA Science Inventory

Benthic invertebrate indices have commonly been utilized to assess benthic invertebrate communities. These indices have been constructed using different techniques, but have shown different levels of application success. For example, the EMAP Virginian Province Index did not pe...

Spatial Patterns of Subtidal Benthic Invertebrates and Environmental Factors in the Nearshore Gulf of Maine

EPA Science Inventory

The spatial patterns of subtidal benthic invertebrates and physical-chemical variables in the nearshore Gulf of Maine (Acadian Biogeographic Province) were studied to provide information needed to calibrate benthic indices of environmental condition, determine physical-chemical f...

Computer-Assisted Analysis of Near-Bottom Photos for Benthic Habitat Studies

DTIC Science & Technology

2006-09-01

navigated survey platform greatly increases the efficiency of image analysis and provides new insight about the relationships between benthic organisms...increase in the efficiency of image analysis for benthic habitat studies, and provides the opportunity to assess small scale spatial distribution of

RELATIONSHIPS BETWEEN ENVIRONMENTAL VARIABLES AND BENTHIC DIATOM ASSEMBLAGES IN CALIFORNIA CENTRAL VALLEY STREAMS (USA)

EPA Science Inventory

Streams and rivers in the California Central Valley Ecoregion have been substantially modified by human activities. This study examines distributional patterns of benthic diatom assemblages in relation to environmental characteristics in streams and rivers of this region. Benthic...

INDEX OF ESTUARINE BENTHIC INTEGRITY FOR GULF OF MEXICO ESTUARIES

EPA Science Inventory

A benthic index for northern Gulf of Mexico estuaries has been developed and successfully validated by the Environmental Monitoring and Assessment Program for Estuaries (EMAP-E) in the Louisianian Province. The benthic index is a useful indicator of estuarine condition that provi...

Biodiversity loss in benthic macroinfaunal communities and its consequence for organic mercury trophic availability to benthivorous predators in the lower Hudson River estuary, USA.

PubMed

Goto, Daisuke; Wallace, William G

2009-12-01

Organic mercury such as methylmercury is not only one of the most toxic substances found in coastal ecosystems but also has high trophic transfer efficiency. In this study, we examined implications of chronically altered benthic macroinfaunal assemblages for organic mercury trophic availability (based on organic mercury intracellular partitioning) to their predators in the Arthur Kill-AK (New York, USA). Despite low species diversity, both density and biomass of benthic macroinvertebrates in AK were significantly higher than those at the reference site. Disproportionately high biomass of benthic macroinvertebrates (mostly polychaetes) in the northern AK resulted in a more than twofold increase ('ecological enrichment') in the trophically available organic mercury pool. These results suggest that altered benthic macroinfaunal community structure in AK may play an important role in organic mercury trophic availability at the base of benthic food webs and potentially in mercury biogeochemical cycling in this severely urbanized coastal ecosystem.

Live coral repels a common reef fish ectoparasite

NASA Astrophysics Data System (ADS)

Artim, J. M.; Sikkel, P. C.

2013-06-01

Coral reefs are undergoing rapid changes as living corals give way to dead coral on which other benthic organisms grow. This decline in live coral could influence habitat availability for fish parasites with benthic life stages. Gnathiid isopod larvae live in the substratum and are common blood-feeding parasites of reef fishes. We examined substrate associations and preferences of a common Caribbean gnathiid, Gnathia marleyi. Emergence traps set over predominantly live coral substrata captured significantly fewer gnathiids than traps set over dead coral substrata. In laboratory experiments, gnathiids preferred dead coral and sponge and tended to avoid contact with live coral. When live gnathiids were added to containers with dead or live coral, significantly fewer were recovered from the latter after 24 h. Our data therefore suggest that live coral is not suitable microhabitat for parasitic gnathiid isopods and that a decrease in live coral cover increases available habitat for gnathiids.

Carbon fate in a large temperate human-impacted river system: Focus on benthic dynamics

NASA Astrophysics Data System (ADS)

Vilmin, Lauriane; Flipo, Nicolas; Escoffier, Nicolas; Rocher, Vincent; Groleau, Alexis

2016-07-01

Fluvial networks play an important role in regional and global carbon (C) budgets. The Seine River, from the Paris urban area to the entrance of its estuary (220 km), is studied here as an example of a large human-impacted river system subject to temperate climatic conditions. We assess organic C (OC) budgets upstream and downstream from one of the world's largest wastewater treatment plants and for different hydrological conditions using a hydrobiogeochemical model. The fine representation of sediment accumulation on the river bed allows for the quantification of pelagic and benthic effects on OC export toward the estuary and on river metabolism (i.e., net CO2 production). OC export is significantly affected by benthic dynamics during the driest periods, when 25% of the inputs to the system is transformed or stored in the sediment layer. Benthic processes also substantially affect river metabolism under any hydrological condition. On average, benthic respiration accounts for one third of the total river respiration along the studied stretch (0.27 out of 0.86 g C m-2 d-1). Even though the importance of benthic processes was already acknowledged by the scientific community for headwater streams, these results stress the major influence of benthic dynamics, and thus of physical processes such as sedimentation and resuspension, on C cycling in downstream river systems. It opens the door to new developments in the quantification of C emissions by global models, whereby biogeochemical processing and benthic dynamics should be taken into account.

Role of macrofauna on benthic oxygen consumption in sandy sediments of a high-energy tidal beach

NASA Astrophysics Data System (ADS)

Charbonnier, Céline; Lavesque, Nicolas; Anschutz, Pierre; Bachelet, Guy; Lecroart, Pascal

2016-06-01

Sandy beaches exposed to tide and waves are characterized by low abundance and diversity of benthic macrofauna, because of high-energy conditions. This is the reason why there are few studies on benthic communities living in such highly dynamic environments. It has been shown recently that tidal sandy beaches may act as biogeochemical reactors. Marine organic matter that is supplied in the sand during each flood tide is efficiently mineralized through aerobic respiration. In order to quantify the role of macrofauna in the whole beach benthic respiration, we studied the macrofauna and the pore water oxygen content of an exposed sandy beach (Truc Vert, SW of France) during four seasons in 2011. The results showed that macrofauna was characterised by a low number of species of specialized organisms such as the crustaceans Eurydice naylori and Gastrosaccus spp. and the polychaetes Ophelia bicornis and Scolelepis squamata. The distribution and abundance of macrofauna were clearly affected by exposure degree and emersion time. The combined monitoring of benthic macrofauna and pore waters chemistry allowed us to estimate (1) the macrofauna oxygen uptake, calculated with a standard allometric relationship using biomass data, and (2) the total benthic oxygen uptake, calculated from the oxygen deficit measured in pore waters. This revealed that benthic macrofauna respiration represented a variable but low (<10%) contribution to the total benthic oxygen consumption. This suggests that oxygen was mainly consumed by microbial respiration.

Importance of benthic production to fish populations in Lake Mead prior to the establishment of quagga mussels

USGS Publications Warehouse

Umek, John; Chandra, Sudeep; Rosen, Michael; Wittmann, Marion; Sullivan, Joe; Orsak, Erik

2010-01-01

Limnologists recently have developed an interest in quantifying benthic resource contributions to higher-level consumers. Much of this research focuses on natural lakes with very little research in reservoirs. In this study, we provide a contemporary snapshot of the food web structure of Lake Mead to evaluate the contribution of benthic resources to fish consumers. In addition, we document the available food to fishes on soft sediments and changes to the invertebrate community over 2 time periods. Benthic invertebrate food availability for fishes is greater in Las Vegas Bay than Overton Arm. Las Vegas Bay is dominated by oligochaetes, whose biomass increased with depth, while Overton Arm is dominated by chironomids, whose biomass did not change with depth. Diet and isotopic measurements indicate the fish community largely relies on benthic resources regardless of basin (Las Vegas Bay >80%; Overton Arm >92%); however, the threadfin shad likely contribute more to largemouth and striped bass production in Overton Arm versus Las Vegas Bay. A 2-time period analysis, pre and post quagga mussel establishment and during lake level declines, suggests there is no change in the density of benthic invertebrates in Boulder Basin, but there were greater abundances of select taxa in this basin by season and depth than in other basins. Given the potential of alterations as a result of the expansion of quagga mussel and the reliance of the fishery on benthic resources, future investigation of basin specific, benthic processes is recommended.

Characteristics of Air Core and Surface Velocity for Water Flow in a Vortex Sediment-Extraction Chamber Measured by Using Photo Images and PTV Technique.

NASA Astrophysics Data System (ADS)

Yao, Hou Chang; Chyan Deng, Jan; Chao, Hsu Yu; Chih Yuan, Yang

2017-04-01

A vortex sediment-extraction chamber, consisted of cylindrical chamber, inflow system, bottom orifice and overflow weir, is used to separate sediment from sediment-laden water flow. A tangential inflow is introduced into a cylindrical chamber with a bottom orifice; thus, a strong vortex flow is produced there. Under actions of gravity and centrifugal force, heavier sediment particles are forced to move towards the bottom orifice, and relatively clear water flows over through the top overflow weir. The flow field in the cylindrical chamber consists of forced vortex and free vortex. When the bottom orifice is opened during the sediment-extraction process, an air core appears and changes with different settings. In this study, the air core and water surface velocity in the cylindrical chamber were measured by using a photo image process and particle tracking velocimetry (PTV), as well as numerically simulated by using a commercial software, Flow-3D.Laboratory experiments were conducted in a vortex chamber, having height of 130 cm and diameter of 48 cm. Five kinds of bottom orifice size from 1.0 cm to 3.0 cm and four kinds of inflow water discharge from 1,300cm3/s to 1,700 cm3/s were used while the inflow pipe of 3 cm in diameter was kept the same for all experiments. The characteristics of the air core and water surface velocity, and the inflow and outflow ratios under different experimental arrangements were observed and discussed so as to provide a better design and application for a vortex sediment-extraction chamber in the future.

The imperative for controlled mechanical stresses in unraveling cellular mechanisms of mechanotransduction

PubMed Central

Anderson, Eric J; Falls, Thomas D; Sorkin, Adam M; Tate, Melissa L Knothe

2006-01-01

Background In vitro mechanotransduction studies are designed to elucidate cell behavior in response to a well-defined mechanical signal that is imparted to cultured cells, e.g. through fluid flow. Typically, flow rates are calculated based on a parallel plate flow assumption, to achieve a targeted cellular shear stress. This study evaluates the performance of specific flow/perfusion chambers in imparting the targeted stress at the cellular level. Methods To evaluate how well actual flow chambers meet their target stresses (set for 1 and 10 dyn/cm2 for this study) at a cellular level, computational models were developed to calculate flow velocity components and imparted shear stresses for a given pressure gradient. Computational predictions were validated with micro-particle image velocimetry (μPIV) experiments. Results Based on these computational and experimental studies, as few as 66% of cells seeded along the midplane of commonly implemented flow/perfusion chambers are subjected to stresses within ±10% of the target stress. In addition, flow velocities and shear stresses imparted through fluid drag vary as a function of location within each chamber. Hence, not only a limited number of cells are exposed to target stress levels within each chamber, but also neighboring cells may experience different flow regimes. Finally, flow regimes are highly dependent on flow chamber geometry, resulting in significant variation in magnitudes and spatial distributions of stress between chambers. Conclusion The results of this study challenge the basic premise of in vitro mechanotransduction studies, i.e. that a controlled flow regime is applied to impart a defined mechanical stimulus to cells. These results also underscore the fact that data from studies in which different chambers are utilized can not be compared, even if the target stress regimes are comparable. PMID:16672051

Plasma Propulsion Testing Capabilities at Arnold Engineering Development Center

NASA Technical Reports Server (NTRS)

Polzin, Kurt A.; Dawbarn, Albert; Moeller, Trevor

2007-01-01

This paper describes the results of a series of experiments aimed at quantifying the plasma propulsion testing capabilities of a 12-ft diameter vacuum facility (12V) at USAF-Arnold Engineering Development Center (AEDC). Vacuum is maintained in the 12V facility by cryogenic panels lining the interior of the chamber. The pumping capability of these panels was shown to be great enough to support plasma thrusters operating at input electrical power >20 kW. In addition, a series of plasma diagnostics inside the chamber allowed for measurement of plasma parameters at different spatial locations, providing information regarding the chamber's effect on the global plasma thruster flowfield. The plasma source used in this experiment was Hall thruster manufactured by Busek Co. The thruster was operated at up to 20 kW steady-state power in both a lower current and higher current mode. The vacuum level in the chamber never rose above 9 x 10(exp -6) torr during the course of testing. Langmuir probes, ion flux probes, and Faraday cups were used to quantify the plasma parameters in the chamber. We present the results of these measurements and estimates of pumping speed based on the background pressure level and thruster propellant mass flow rate.

Experimental and Numerical Research of a Novel Combustion Chamber for Small Gas Turbine Engines

NASA Astrophysics Data System (ADS)

Tuma, J.; Kubata, J.; Betak, V.; Hybl, R.

2013-04-01

New combustion chamber concept (based on burner JETIS-JET Induced Swirl) for small gas turbine engine (up to 200kW) is presented in this article. The combustion chamber concept is based on the flame stabilization by the generated swirl swirl generated by two opposite tangentially arranged jet tubes in the intermediate zone, this arrangement replaces air swirler, which is very complicated and expensive part in the scope of small gas turbines with annular combustion chamber. The mixing primary jets are oriented partially opposite to the main exhaust gasses flow, this enhances hot product recirculation and fuel-air mixing necessary for low NOx production and flame stability. To evaluate the designed concept a JETIS burner demonstrator (methane fuel) was manufactured and atmospheric experimental measurements of CO, NOx for various fuel nozzles and jet tubes the configuration were done. Results of these experiments and comparison with CFD simulation are presented here. Practical application of the new chamber concept in small gas turbine liquid fuel combustor was evaluated (verified) on 3 nozzles planar combustor sector test rig at atmospheric conditions results of the experiment and numerical simulation are also presented.

Linking shrimp assemblages with rates of detrital processing along an elevational gradient in a tropical stream

Treesearch

James G. March; Jonathan P. Benstead; Catherine M. Pringle; Mark W. Ruebel

2001-01-01

We experimentally excluded freshwater shrimp assemblages (Atyidae, Xiphocarididae, and Palaemonidae) to examine their effects on detrital processing and benthic insect biomass at three sites along an elevational gradient in a tropical stream in Puerto Rico. We also determined which shrimp taxon was responsible for leaf decay in a subsequent laboratory experiment. At...

Alpha LAMP Integration Facility

NASA Technical Reports Server (NTRS)

Oshiro, Richard; Sowers, Dennis; Gargiulo, Joe; Mcgahey, Mark

1994-01-01

This paper describes the activity recently completed to meet the simulated space environment requirements for the ground-based testing of an integrated Space Based Laser (SBL) system experiment. The need to maintain optical alignment in the challenging dynamic environment of the pressure recovery system required to simulate space dominated the design requirements. A robust system design was established which minimized the total program costs, most notably by reducing the cost of integrating the components of the experiment. The components of the experiment are integrated on an optical bench in a clean area adjacent to the vacuum chamber and moved on air bearings into the chamber for testing.

Microwave remote plasma enhanced-atomic layer deposition system with multicusp confinement chamber

NASA Astrophysics Data System (ADS)

Dechana, A.; Thamboon, P.; Boonyawan, D.

2014-10-01

A microwave remote Plasma Enhanced-Atomic Layer Deposition system with multicusp confinement chamber is established at the Plasma and Beam Physics research facilities, Chiang Mai, Thailand. The system produces highly-reactive plasma species in order to enhance the deposition process of thin films. The addition of the multicusp magnetic fields further improves the plasma density and uniformity in the reaction chamber. Thus, the system is more favorable to temperature-sensitive substrates when heating becomes unwanted. Furthermore, the remote-plasma feature, which is generated via microwave power source, offers tunability of the plasma properties separately from the process. As a result, the system provides high flexibility in choice of materials and design experiments, particularly for low-temperature applications. Performance evaluations of the system were carried on coating experiments of Al2O3 layers onto a silicon wafer. The plasma characteristics in the chamber will be described. The resulted Al2O3 films—analyzed by Rutherford Backscattering Spectrometry in channeling mode and by X-ray Photoelectron Spectroscopy techniques—will be discussed.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garimella, Sarvesh; Kristensen, Thomas Bjerring; Ignatius, Karolina

The SPectrometer for Ice Nuclei (SPIN) is a commercially available ice nucleating particle (INP) counter manufactured by Droplet Measurement Technologies in Boulder, CO. The SPIN is a continuous flow diffusion chamber with parallel plate geometry based on the Zurich Ice Nucleation Chamber and the Portable Ice Nucleation Chamber. This study presents a standard description for using the SPIN instrument and also highlights methods to analyze measurements in more advanced ways. It characterizes and describes the behavior of the SPIN chamber, reports data from laboratory measurements, and quantifies uncertainties associated with the measurements. Experiments with ammonium sulfate are used to investigatemore » homogeneous freezing of deliquesced haze droplets and droplet breakthrough. Experiments with kaolinite, NX illite, and silver iodide are used to investigate heterogeneous ice nucleation. SPIN nucleation results are compared to those from the literature. A machine learning approach for analyzing depolarization data from the SPIN optical particle counter is also presented (as an advanced use). Altogether, we report that the SPIN is able to reproduce previous INP counter measurements.« less

Microwave remote plasma enhanced-atomic layer deposition system with multicusp confinement chamber.

PubMed

Dechana, A; Thamboon, P; Boonyawan, D

2014-10-01

A microwave remote Plasma Enhanced-Atomic Layer Deposition system with multicusp confinement chamber is established at the Plasma and Beam Physics research facilities, Chiang Mai, Thailand. The system produces highly-reactive plasma species in order to enhance the deposition process of thin films. The addition of the multicusp magnetic fields further improves the plasma density and uniformity in the reaction chamber. Thus, the system is more favorable to temperature-sensitive substrates when heating becomes unwanted. Furthermore, the remote-plasma feature, which is generated via microwave power source, offers tunability of the plasma properties separately from the process. As a result, the system provides high flexibility in choice of materials and design experiments, particularly for low-temperature applications. Performance evaluations of the system were carried on coating experiments of Al2O3 layers onto a silicon wafer. The plasma characteristics in the chamber will be described. The resulted Al2O3 films-analyzed by Rutherford Backscattering Spectrometry in channeling mode and by X-ray Photoelectron Spectroscopy techniques-will be discussed.

Design of an elemental analysis system for CELSS research

NASA Technical Reports Server (NTRS)

Schwartzkopf, Steven H.

1987-01-01

The results of experiments conducted with higher plants in tightly sealed growth chambers provide definite evidence that the physical closure of a chamber has significant effects on many aspects of a plant's biology. One of these effects is seen in the change in rates of uptake, distribution, and re-release or nutrient elements by the plant (mass balance). Experimental data indicates that these rates are different from those recorded for plants grown in open field agriculture, or in open growth chambers. Since higher plants are a crucial component of a controlled ecological life support system (CELSS), it is important that the consequences of these rate differences be understood with regard to the growth and yield of the plants. A description of a system for elemental analysis which can be used to monitor the mass balance of nutrient elements in CELSS experiments is given. Additionally, data on the uptake of nutrient elements by higher plants grown in a growth chamber is presented.

Benthic macroinvertebrate assemblages in the US nearshore zone of Lake Erie, 2009: Status and linkages to landscape-derived stressors

EPA Science Inventory

Benthic macroinvertebrate assemblages have been used as indicators of ecological condition because their responses integrate localized environmental conditions of the sediments and overlying water. Assemblages of benthic invertebrates in the near coastal region are of particular...

Application of Multiple Index Development Approaches to Benthic Invertebrate Data from the Virginian Biogeographic Province (SETAC NA)

EPA Science Inventory

Benthic invertebrate indices have commonly been utilized to assess benthic invertebrate communities. These indices have been constructed using different techniques, but have shown different levels of application success. For example, the EMAP Virginian Province Index did not pe...

LATITUDINAL GRADIENTS IN BENTHIC COMMUNITY COMPOSITION IN WESTERN ATLANTIC ESTUARIES

EPA Science Inventory

The community structure of benthic macroinvertebrates from estuaries along the Atlantic coast of North America from Cape Cod, MA, to Biscayne Bay, FL, were compared. Benthic data were collected over a 5 year period (1990 to 1995) by the U.S. Environmental Protection Agency's Envi...

History of benthic research in the English Channel: From general patterns of communities to habitat mosaic description

NASA Astrophysics Data System (ADS)

Dauvin, Jean-Claude

2015-06-01

Benthic studies in the English Channel (EC), a shallow megatidal and epicontinental sea, began in the 1960s and 1970s with the work of teams led by Norman Holme (UK) and Louis Cabioch (F). During this period, benthic sampling was mainly qualitative, i.e. using a device such as the 'Rallier du Baty' dredge in the case of the French team and a modified anchor dredge in the case of the British team. Studies were focused on acquiring knowledge of the main distributions of benthic communities and species. Surveys on the scale of the whole EC led to the recognition of general features and two main patterns were identified: 1) the role of hydrodynamics on the spatial distribution of sediment, benthic species and communities; 2) the presence of a west-east climatic gradient of faunal impoverishment. Benthic studies in the 1980s-1990s were focused on the beginning of the implementation of long-term survey at a limited number of sites to identify seasonal and multi-annual changes. In the first decade of the 2000s, the implementation of the European Water Framework Directive and the Marine Strategy Framework Directive to define the Ecological Quality Status of marine environments increased the need to acquire better information of the structure and functioning of benthic communities, since benthic species and habitats were recognised as good indicators of human pressure on marine ecosystems. Faced with the increase of human maritime activities, the appearance of invasive species and the need to preserve sensitive marine habitats, benthic studies have been focused on developing a 'toolkit' to help in the decision-making and planning for both sound governance and sustainable management of marine resources and human activities in the English Channel. Multidisciplinary approaches were used to differentiate habitats in a more precise detail. Both indirect (side-scan sonar, ROV) and direct (grab sampling with benthos identification and grain-size analyses) approaches were used and combined to allow the description of benthic habitats using numerous descriptors. These approaches were mainly applied on a local scale, leading to the identification of habitat mosaics mainly in coarse sands, gravels and pebbly areas which cover 80% of the EC seabed. They also allowed the enrichment of the EUNIS habitat classification for infralittoral and circalittoral zones taking into account the scale of observations of benthic habitats. Moreover, several recommendations for future benthic studies are proposed within a HABITAT approach.

Distributed drift chamber design for rare particle detection in relativistic heavy ion collisions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bellwied, R.; Bennett, M.J.; Bernardo, V.

2001-10-02

This report describes a multi-plane drift chamber that was designed and constructed to function as a topological detector for the BNL AGSE896 rare particle experiment. The chamber was optimized for good spatial resolution, two track separation, and a high uniform efficiency while operating in a 1.6 Tesla magnetic field and subjected to long term exposure from a 11.6 GeV/nucleon beam of 10**6 Au ions per second.

The response of ionization chambers to relativistic heavy nuclei

NASA Technical Reports Server (NTRS)

Newport, B. J.; Stone, E. C.; Waddington, C. J.; Binns, W. R.; Fixsen, D. J.; Garrard, T. L.; Grimm, G.; Israel, M. H.; Klarmann, J.

1985-01-01

The LBL Bevalac for the Heavy Nuclei Experiment on HEAO-3, compared the response of a set of laboratory ionization chambers to beams of 26Fe, 36Kr, 54Xe, 67 Ho, and 79Au nuclei at maximum energies ranging from 1666 MeV/amu for Fe to 1049 MeV/amu for Au. The response of these chambers shows a significant deviation from the expected energy dependence, but only a slight deviation from Z sq scaling.

Imaging and Information Processing of Pitting-Corroded Aluminum Alloy Panels with Surface Metrology Methods

DTIC Science & Technology

2014-12-23

positioned outside the sealed chamber by passing extension cables through the bulkhead in the chamber. Temperature and relative humidity were acquired at...inside the chamber was varied in temperature and humidity to promote corrosion. Panels 1-3 were removed 133, 209 and 286 hours from the experiment...indicated that, the nucleated pits, as those general non- visible ones in Panel 1, usually took regular morphological forms, such as hemi-spherical, near

Uniform, stable supply of medium for in vitro cell culture using a robust chamber

NASA Astrophysics Data System (ADS)

Wei, Juan; Liu, Chong; Jiang, Yang; Liu, Tao; Chen, Li; Liu, Bo; Li, Jingmin

2018-06-01

A uniform, stable supply of medium is important for in vitro cell culture. In this paper, a microfluidic device is presented for culturing cells inside a robust chamber with continuous perfusion of medium. The device consists of a main channel, two bifurcated channels and a culture chamber. The culture chamber connects to the bifurcated channels via multiple paths, and distributes symmetrically on the main channel, to improve the efficiency of medium exchange. Furthermore, regular polygonal chambers with various numbers of edges have been designed, to study the effects of chamber shape on flow fields. The finite element method has been employed to predict the effects of multiple paths on the uniformity and stability of flow fields in the culture chamber. Particle tracking technology has been used to evaluate the flow fields in the chambers, and PC-12 cells have been cultured using the microfluidic device, to test its validity. The results of simulation and experiment indicate that the microfluidic design could provide a continuous interstitial-like flow microenvironment, with a relatively stable and uniform supply of medium.

Trophic Tangles through Time? Opposing Direct and Indirect Effects of an Invasive Omnivore on Stream Ecosystem Processes

PubMed Central

Moore, Jonathan W.; Carlson, Stephanie M.; Twardochleb, Laura A.; Hwan, Jason L.; Fox, Justin M.; Hayes, Sean A.

2012-01-01

Omnivores can impact ecosystems via opposing direct or indirect effects. For example, omnivores that feed on herbivores and plants could either increase plant biomass due to the removal of herbivores or decrease plant biomass due to direct consumption. Thus, empirical quantification of the relative importance of direct and indirect impacts of omnivores is needed, especially the impacts of invasive omnivores. Here we investigated how an invasive omnivore (signal crayfish, Pacifastacus leniusculus) impacts stream ecosystems. First, we performed a large-scale experiment to examine the short-term (three month) direct and indirect impacts of crayfish on a stream food web. Second, we performed a comparative study of un-invaded areas and areas invaded 90 years ago to examine whether patterns from the experiment scaled up to longer time frames. In the experiment, crayfish increased leaf litter breakdown rate, decreased the abundance and biomass of other benthic invertebrates, and increased algal production. Thus, crayfish controlled detritus via direct consumption and likely drove a trophic cascade through predation on grazers. Consistent with the experiment, the comparative study also found that benthic invertebrate biomass decreased with crayfish. However, contrary to the experiment, crayfish presence was not significantly associated with higher leaf litter breakdown in the comparative study. We posit that during invasion, generalist crayfish replace the more specialized native detritivores (caddisflies), thereby leading to little long-term change in net detrital breakdown. A feeding experiment revealed that these native detritivores and the crayfish were both effective consumers of detritus. Thus, the impacts of omnivores represent a temporally-shifting interplay between direct and indirect effects that can control basal resources. PMID:23209810

Studies on Charge Variation and Waves in Dusty Plasmas

NASA Astrophysics Data System (ADS)

Kausik, Siddhartha Sankar

Plasma and dust grains are both ubiquitous ingredients of the universe. The interplay between them has opened up a new and fascinating research domain, that of dusty plasmas, which contain macroscopic particles of solid matter besides the usual plasma constituents. The research in dusty plasmas received a major boost in the early eighties with Voyager spacecraft observation on the formation of Saturn rings. Dusty plasmas are defined as partially or fully-ionized gases that contain micron-sized particles of electrically charged solid material, either dielectric or conducting. The physics of dusty plasmas has recently been studied intensively because of its importance for a number of applications in space and laboratory plasmas. This thesis presents the experimental studies on charge variation and waves in dusty plasmas. The experimental observations are carried out in two different experimental devices. Three different sets of experiments are carried out in two different experimental devices. Three different sets of experiments are carried out to study the dust charge variation in a filament discharge argon plasma. The dust grains used in these experiments are grains of silver. In another get of experiment, dust acoustic waves are studied in a de glow discharge argon plasma. Alumina dust grains are sprinkled in this experiment. The diagnostic tools used in these experiments are Langmuir probe and Faraday cup. The instruments used in these experiments are electrometer, He-Ne laser and charge coupled device (CCD) camera. Langmuir probe is used to measure plasma parameters, while Faraday cup and electrometer are used to measure very low current (~pA) carried by a collimated dust beam. He-Ne laser illuminates the dust grains and CCD camera is used to capture the images of dust acoustic waves. Silver dust grains are produced in the dust chamber by gas-evaporation technique. Due to differential pressure maintained between the dust and plasma chambers, the dust grains move upward in the form of a collimated beam. Argon plasma is produced in an experimental setup consisting of a dust chamber, a plasma chamber and a diagnostic chamber (also called deflection chamber) by striking a discharge between incandescent tungsten filaments and the magnetic cage, which is grounded. Plasma thus produced is confined by a full line cusped magnetic field confinement system consisting of a cylindrically shaped cage made up of stainless steel channels filled up with cube shaped having 1.2 kG field strength at its surface.

Cooling of High Pressure Rocket Thrust Chambers with Liquid Oxygen

NASA Technical Reports Server (NTRS)

Price, H. G.

1980-01-01

An experimental program using hydrogen and oxygen as the propellants and supercritical liquid oxygen (LOX) as the coolant was conducted at 4.14 and 8.274 MN/square meters (600 and 1200 psia) chamber pressure. Data on the following are presented: the effect of LOX leaking into the combustion region through small cracks in the chamber wall; and verification of the supercritical oxygen heat transfer correlation developed from heated tube experiments; A total of four thrust chambers with throat diameters of 0.066 m were tested. Of these, three were cyclically tested to 4.14 MN/square meters (600 psia) chamber pressure until a crack developed. One had 23 additional hot cycles accumulated with no apparent metal burning or distress. The fourth chamber was operated at 8.274 MN/square meters (1200 psia) pressure to obtain steady state heat transfer data. Wall temperature measurements confirmed the heat transfer correlation.

The trophic biology of the holothurian Molpadia musculus: implications for organic matter cycling and ecosystem functioning in a deep submarine canyon

NASA Astrophysics Data System (ADS)

Amaro, T.; Bianchelli, S.; Billett, D. S. M.; Cunha, M. R.; Pusceddu, A.; Danovaro, R.

2010-08-01

Megafaunal organisms play a key role in ecosystem functioning in the deep-sea through bioturbation, bioirrigation and organic matter cycling. At 3500 m water depth in the Nazaré Canyon, NE Atlantic, very high abundances of the infaunal holothurian Molpadia musculus were observed. To quantify the role of M. musculus in sediment cycling, sediment samples and holothurians were collected using an ROV and in situ experiments were conducted with incubation chambers. The biochemical composition of the sediment (in terms of proteins, carbohydrates and lipids), the holothurians' gut contents and holothurians' faecal material were analysed. In the sediments, proteins were the dominant organic compound, followed by carbohydrates and lipids. In the holothurian's gut contents, protein concentrations were higher than the other compounds, decreasing significantly as the material passed through the digestive tract. Approximately 33±1% of the proteins were digested by the time sediment reached the mid gut, with a total digestion rate equal to 67±1%. Carbohydrates and lipids were ingested in smaller amounts and digested with lower efficiencies (23±11% and 50±11%, respectively). As a result, the biopolymeric C digestion rate was on average 62±3%. We estimated that the population of M. musculus could remove approximately 0.49±0.13 g biopolymeric C and 0.13±0.03 g N m-2 d-1 from the sediments. These results suggest that M. musculus plays a key role in the benthic tropho-dynamics and biogeochemical processes in the Nazaré Canyon.

Impact of Salinity Gradients on Ammonia Bioattenuation Processes in a Photosynthetic Wetland Biomat

NASA Astrophysics Data System (ADS)

Vega, M.; Jones, Z.; Sharp, J.

2017-12-01

Shallow, open water treatment wetlands may be able to offset challenges associated with the reclamation of impaired waters (e.g., membrane fouling, aeration costs, etc.) due to natural biogeochemical fluctuations produced by a benthic, photoactive biomat. This diatomaceous, redox-stratified biomat has demonstrated significant nitrate and trace organic removal from municipal wastewater streams and the microbial community has been thoroughly characterized. However, research is required to predict shifts in community structure and function in response to the excess salinity, ammonia, and metal gradients of impaired waters. Batch microcosm studies inoculating biomat from an active open water treatment wetland with incremental dilutions of hydraulic fracturing produced water were conducted in a light chamber with oscillating twelve-hour light and dark cycles to assess the effect of an impaired water matrix on biomat functionality. Diurnal photosynthetic signatures and ammonia removal kinetics were quantified in various experiments probing the effects of oscillating light conditions, biomat depth, water column isolation, nitrogen source, and salinity gradients in conjunction with phylogenetic profiles and morphological characterization. Diurnal pH and dissolved oxygen fluctuations were present at all produced water permutations, perhaps indicating stabilization of photosynthetic communities. Ammonia attenuation results suggest that the biomat is effective at removing ammonia, although first order rate constants decrease with increasing produced water abundance. Microbial community diversity appears to decrease with increasing salinity, and it is likely that these shifts correspond to variation in ecosystem function and thus treatment effectiveness. The application of shallow, open water treatment wetlands to remediate impaired waters has the potential to address societally relevant problems while discerning fundamental biogeochemical phenomena.

Hypoxia impairs embryo development and survival in black bream (Acanthopagrus butcheri).

PubMed

Hassell, Kathryn L; Coutin, Patrick C; Nugegoda, Dayanthi

2008-01-01

Coastal environments are threatened by the increasing frequency, extent and severity of hypoxic events. Hypoxia affects vast areas around the world and often causes fish kills, reduced abundance, altered distribution, low benthic biomass and declines in fisheries. In Australia, many fisheries are based on sparid fishes and in the southern states black bream (Acanthopagrus butcheri) is important to both the recreational and commercial sectors. This species completes its entire life cycle in estuaries and annual recruitment is highly variable and very likely influenced by environmental conditions during the spawning season. In a laboratory-based experiment, fertilised black bream eggs (embryos) were exposed to five different levels of dissolved oxygen (DO). The DO levels were maintained in small test wells using nitrogen gas in a novel chamber design. Embryo development was assessed over a 2-day period and hatched larvae were observed until Day 2 post-hatch. Significant differences (p<0.05) were observed in embryonic development and survival as a function of DO level. In severely hypoxic conditions (30% saturation) survival to 1 day was reduced and no hatching occurred. In moderately hypoxic conditions (45-55%S), both precocious and delayed hatching was observed and hatch rates were reduced, whilst the number of hatched larvae with deformities increased, resulting in reduced larval lengths. No larvae survived to Day 2 post-hatch when held in hypoxic conditions (<55%S). This study demonstrates the detrimental effect that severe hypoxia can have on the early development of black bream which could result in reduced recruitment and lowered abundance. Other species that share similar early life histories may also be at risk.

Modeling Benthic Sediment Processes to Predict Water Quality and Ecology in Narragansett Bay

EPA Science Inventory

The benthic sediment acts as a huge reservoir of particulate and dissolved material (within interstitial water) which can contribute to loading of contaminants and nutrients to the water column. A benthic sediment model is presented in this report to predict spatial and temporal ...

Development of a National-Scale Indicator of Benthic Condition for the National Coastal Condition Assessment.

EPA Science Inventory

The US EPA has evaluated the application of a national-scale indicator of estuarine benthic condition for the National Coastal Condition Assessment (NCCA). Historically, in the National Coastal Condition Reports (NCCR I-IV), estuarine benthic condition was assessed by applying m...

BENTHIC NUTRIENT FLUX IN A SMALL ESTUARY IN NORTHWESTERNFLORIDA (USA)

EPA Science Inventory

Benthic Nutrient Flux in a Small Estuary in Northwestern Florida(USA).Gulf and Caribbean Research 18, 15-25, 2006.

Benthic nutrient fluxes of ammonium (NH4+), nitrite/nitrate (NO2-+NO3-), phosphate (PO4-), and dissolved silica (DSi) were measured in Escambia Bay, an estuar...

CHANGES IN THE FRESHWATER BENTHIC COMMUNITY OF LAKE ONTARIO SINCE THE INVASION OF DREISSENA 1972-1997

EPA Science Inventory

Population changes of three major benthic taxa are discussed in relation to Dreissena spp. Lake Ontario was sampled pre-invasion (1972) and post-invasion (1994, 1997) for abundance of benthic organisms. In offshore sediments of Lake Ontario, neither species composition nor abunda...

A MORE COST-EFFECTIVE EMAP-ESTUARIES BENTHIC MACROFAUNAL SAMPLING PROTOCOL

EPA Science Inventory

The standard benthic macrofaunal sampling protocol in the U.S. Environmental Protection Agency's Pacific Coast Environmental Monitoring and Assessment Program (EMAP) is to collect a minimum of 30 random benthic samples per reporting unit (e.g., estuary) using a 0.1 m2 grab and to...

A MORE COST-EFFECTIVE EMAP BENTHIC MACROFAUNAL SAMPLING PROTOCOL

EPA Science Inventory

Benthic macrofaunal sampling protocols in the U.S. Environmental Protection Agency's Environmental Monitoring and Assessment Program (EMAP) are to collect 30 to 50 random benthic macrofauna [defined as animals retained on a 0.5 mm (East and Gulf Coasts, USA) or a 1.0 mm mesh siev...

Marine Benthic Communities of Block Island and Rhode Island Sounds and What they're Good For

EPA Science Inventory

The benthic invertebrates of Block Island and Rhode Island Sounds include those adapted to near-shore habitats with variable temperature and salinity, mid-shelf species with narrower requirements, and boreal species that avoid elevated temperatures. Studies of benthic fauna in th...

Coastal Benthic Optical Properties (CoBOP): Optical Properties of Benthic Marine Organisms and Substrates

DTIC Science & Technology

2001-09-30

significance of fluorescence and reflectance characteristics of benthic marine organisms in general, and coral reef cnidarians in particular. We wish to... cnidarians in particular. We wish to determine 1) how biological processes act to produce the optical properties and 2) how optical measurements can be

Explosive diversification following a benthic to pelagic shift in freshwater fishes.

PubMed

Hollingsworth, Phillip R; Simons, Andrew M; Fordyce, James A; Hulsey, C Darrin

2013-12-17

Interspecific divergence along a benthic to pelagic habitat axis is ubiquitous in freshwater fishes inhabiting lentic environments. In this study, we examined the influence of this habitat axis on the macroevolution of a diverse, lotic radiation using mtDNA and nDNA phylogenies for eastern North America's most species-rich freshwater fish clade, the open posterior myodome (OPM) cyprinids. We used ancestral state reconstruction to identify the earliest benthic to pelagic transition in this group and generated fossil-calibrated estimates of when this shift occurred. This transition could have represented evolution into a novel adaptive zone, and therefore, we tested for a period of accelerated lineage accumulation after this historical habitat shift. Ancestral state reconstructions inferred a similar and concordant region of our mtDNA and nDNA based gene trees as representing the shift from benthic to pelagic habitats in the OPM clade. Two independent tests conducted on each gene tree suggested an increased diversification rate after this inferred habitat transition. Furthermore, lineage through time analyses indicated rapid early cladogenesis in the clade arising after the benthic to pelagic shift. A burst of diversification followed the earliest benthic to pelagic transition during the radiation of OPM cyprinids in eastern North America. As such, the benthic/pelagic habitat axis has likely influenced the generation of biodiversity across disparate freshwater ecosystems.

Microbial and sponge loops modify fish production in phase-shifting coral reefs.

PubMed

Silveira, Cynthia B; Silva-Lima, Arthur W; Francini-Filho, Ronaldo B; Marques, Jomar S M; Almeida, Marcelo G; Thompson, Cristiane C; Rezende, Carlos E; Paranhos, Rodolfo; Moura, Rodrigo L; Salomon, Paulo S; Thompson, Fabiano L

2015-10-01

Shifts from coral to algae dominance of corals reefs have been correlated to fish biomass loss and increased microbial metabolism. Here we investigated reef benthic and planktonic primary production, benthic dissolved organic carbon (DOC) release and bacterial growth efficiency in the Abrolhos Bank, South Atlantic. Benthic DOC release rates are higher while water column bacterial growth efficiency is lower at impacted reefs. A trophic model based on the benthic and planktonic primary production was able to predict the observed relative fish biomass in healthy reefs. In contrast, in impacted reefs, the observed omnivorous fish biomass is higher, while that of the herbivorous/coralivorous fish is lower than predicted by the primary production-based model. Incorporating recycling of benthic-derived carbon in the model through microbial and sponge loops explains the difference and predicts the relative fish biomass in both reef types. Increased benthic carbon release rates and bacterial carbon metabolism, but decreased bacterial growth efficiency could lead to carbon losses through respiration and account for the uncoupling of benthic and fish production in phase-shifting reefs. Carbon recycling by microbial and sponge loops seems to promote an increase of small-bodied fish productivity in phase-shifting coral reefs. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

Lake Ontario benthic prey fish assessment, 2014

USGS Publications Warehouse

Weidel, Brian C.; Walsh, Maureen

2015-01-01

Benthic prey fishes are an important component of the Lake Ontario fish community and serve as vectors that move energy from benthic invertebrates into native and introduced sport fishes. Since the 1970’s, the USGS Lake Ontario Biological Station has assessed benthic fish populations and community dynamics with bottom trawls at depths ranging from 8 m out to depths of 150-225 m along the south and eastern shores of Lake Ontario. From the late 1970’s through the early 2000’s the benthic fish community was dominated by Slimy Sculpin Cottus cognatus, but in 2004 non-native Round Goby Neogobius melanostomus abundance increased and, since then Round Goby have generally been the dominant benthic species. Over the past 10 years the native Deepwater Sculpin Myoxocephalus thompsonii, once considered absent from the lake, have increased. Presently their lake-wide biomass density is equal to, or larger than, Slimy Sculpin. Species-specific assessments found Slimy and Deepwater Sculpin abundance increased slightly in 2014 relative to 2013, while changes in Round Goby abundance differed between spring and fall survey. Recent survey modifications have increased our understanding of benthic prey fish abundance and behavior in Lake Ontario. For instance, increasing the maximum tow depth to 225 m in 2014 improved our understanding of Deepwater Sculpin distribution in this rarely sampled lake habitat.

Effects of contrasting upwelling downwelling on benthic foraminiferal distribution in the Ría de Vigo (NW Spain)

NASA Astrophysics Data System (ADS)

Diz, Paula; Francés, Guillermo; Rosón, Gabriel

2006-04-01

Live benthic foraminifera in the superficial sediments from the muddy central axis of the Ría de Vigo were examined under two contrasting hydrographic conditions: downwelling and upwelling. During downwelling conditions the abundance of benthic foraminifera does not show large differences between sites with different organic carbon contents. The arrival of labile organic carbon to the seafloor delivered during upwelling events causes an increase in the abundance of the most significant species and the appearance of new species in the life assemblage. This suggests that benthic foraminiferal faunas strongly depend on high quality organic carbon supply and the sedimentary organic carbon is not a good indicator of food availability to benthic foraminifera. The response of benthic foraminifera to phytoplankton blooms differs between outer and inner sites. In outer and middle areas benthic foraminiferal assemblages show quick population growth in reaction to phytoplankton blooms (r-strategists), whereas in inner sites the most abundant species displays both growth and reproduction (k-strategists). It is suggested that r-strategy results of adaptation to perturbations on short time-scales (downwelling/upwelling cycles) under favourable microenvironmental conditions, while the k-strategy represents the adaptation to long term perturbations, such as relatively low oxygen concentrations and/or reducing microenvironmental conditions in the sediment.

Concentrations of selected heavy metals in benthic diatoms and sediment in the Westerschelde Estuary

DOE Office of Scientific and Technical Information (OSTI.GOV)

Absil, M.C.P.; Scheppingen, Y. van

1996-12-31

In recent years considerable data have been compiled on heavy metal levels in biota in marine and estuarine environments. With respect to the fauna, much information is available on accumulation and effects of heavy metals in birds, fish and benthic macrofauna. Accumulation of heavy metals in aquatic flora has been studied mostly in benthic macroalgae, in particular in relation to the use as a biological monitor. The response of planktonic algal species to heavy metals has been studied extensively in cultured populations. Also. heavy metal concentrations in natural plankton have been studied. As far as we know, very few datamore » are available on the concentrations of heavy metals in the lowest benthic trophic level, the benthic microflora. It is a major food supply for numerous intertidal species, so it is obvious that microflora might play an important role in the accumulation of contaminants through coastal food chains. The aim of this research was to adjust a recently developed collection technique for benthic diatoms so that it is suitable for large-scale field studies. The method was then used to assess the concentration of the heavy metals Cd, Cu, Pb and Zn in benthic diatoms and sediments along an estuarine gradient. 18 refs., 2 figs., 1 tab.« less

Food and disturbance effects on Arctic benthic biomass and production size spectra

NASA Astrophysics Data System (ADS)

Górska, Barbara; Włodarska-Kowalczuk, Maria

2017-03-01

Body size is a fundamental biological unit that is closely coupled to key ecological properties and processes. At the community level, changes in size distributions may influence energy transfer pathways in benthic food webs and ecosystem carbon cycling; nevertheless they remain poorly explored in benthic systems, particularly in the polar regions. Here, we present the first assessment of the patterns of benthic biomass size spectra in Arctic coastal sediments and explore the effects of glacial disturbance and food availability on the partitioning of biomass and secondary productivity among size-defined components of benthic communities. The samples were collected in two Arctic fjords off west Spitsbergen (76 and 79°N), at 6 stations that represent three regimes of varying food availability (indicated by chlorophyll a concentration in the sediments) and glacial sedimentation disturbance intensity (indicated by sediment accumulation rates). The organisms were measured using image analysis to assess the biovolume, biomass and the annual production of each individual. The shape of benthic biomass size spectra at most stations was bimodal, with the location of a trough and peaks similar to those previously reported in lower latitudes. In undisturbed sediments macrofauna comprised 89% of the total benthic biomass and 56% of the total production. The lower availability of food resources seemed to suppress the biomass and secondary production across the whole size spectra (a 6-fold decrease in biomass and a 4-fold decrease in production in total) rather than reshape the spectrum. At locations where poor nutritional conditions were coupled with disturbance, the biomass was strongly reduced in selected macrofaunal size classes (class 10 and 11), while meiofaunal biomass and production were much higher, most likely due to a release from macrofaunal predation and competition pressure. As a result, the partitioning of benthic biomass and production shifted towards meiofauna (39% of biomass and 83% of production), which took over the benthic metazoan key-player role in terms of processing organic matter in sediments. Macrofaunal nematodes composed a considerable portion of the benthic community in terms of biomass (up to 9%) and production (up to 12%), but only in undisturbed sediments with high organic matter content. Our study indicates that food availability and disturbance controls the total bulk and partitioning of biomass and production among the size classes in Arctic benthic communities.

Partitioning the contributions of mega-, macro- and meiofauna to benthic metabolism on the upper continental slope of New Zealand: Potential links with environmental factors and trawling intensity

NASA Astrophysics Data System (ADS)

Leduc, Daniel; Pilditch, Conrad A.; Nodder, Scott D.

2016-02-01

Understanding and predicting change in deep-sea benthic ecosystem function remains a major challenge. Here, we conducted analyses combining data on the abundance and biomass of benthic fauna and sediment community oxygen consumption (SCOC) on New Zealand's continental margin to estimate and compare the contributions of meio-, macro-, and megafauna to total benthic metabolism and identify potential links with environmental factors and trawling intensity. We focussed on two regions in close proximity-the high surface primary productivity Chatham Rise and low surface productivity Challenger Plateau. Mean megafauna biomass was twenty times greater on Chatham Rise than Challenger Plateau, likely reflecting differences in food supply between the two regions; this contrast in megafaunal biomass was mainly due to differences in mean body weight rather than abundance. Meio- and macrofauna made similar contributions to SCOC and together accounted for 12% of benthic metabolism on average. In contrast, the estimated contribution of megafauna never exceeded 1.5%. Significant positive correlations between faunal respiration and food availability indicate a link between food supply and benthic community function. Our analyses also show that fauna made a greater contribution to SCOC in conditions of high food availability, and that microorganisms (i.e., the proportion of SCOC not accounted for by the fauna) tended to be more dominant at sites with low food availability. These findings provide support for the concept that large organisms are more strongly affected by a reduction in food resources than small organisms, which in turn underlies one of the most widely described patterns in the deep-sea benthos, i.e., the reduction in organism body size with depth. Because metabolism in deep-sea sediments is typically dominated by microorganisms and small fauna, the absence of a relationship between bottom trawling intensity and the respiration of benthic fauna in the present study may be explained by benthic communities shifting towards smaller body size following physical disturbance. Future studies of deep-sea benthic ecosystem function will need to quantify the indirect influence of fauna on microbial metabolism through activities such as feeding and bioturbation in order to better understand the total contribution of benthic fauna to benthic processes.

Development of Large Area Emulsion Chamber Methods with a Super Conducting Magnet for Observation of Cosmic Ray Nuclei from 1 GeV to 1,000 TeV (Emulsion Techniques)

NASA Technical Reports Server (NTRS)

Takahashi, Yoshiyuki; Gregory, John C.; Tominaga, Taka; Dong, Bei Lei

1997-01-01

The research developed the fundamental techniques of the emulsion chamber methods that permit measurements of the composition and energy spectra of cosmic rays at energies ranging from 1 GeV/n to over 1,000 TeV/n. The research program consisted of exploring new principles and techniques in measuring very high energy cosmic nuclei with large-area emulsion chambers for high statistics experiments. These tasks have been accomplished and their use was essential in successful analysis of the balloon-borne emulsion chamber experiments up to 10(exp 14) eV. It also provided the fundamental technologies for designing large-area detectors that are aimed at measuring the composition at above 1015 eV region. The latter is now partially succeeded by a NASA Mission Concept, Advanced Cosmic Composition Experiments on the Space Station (ACCESS). The cosmic ray group at the University of Alabama in Huntsville has performed technological R & D as well as contributing to the Japanese-American-Emulsion-Chamber-Experiments (JACEE) Collaboration with the regular data analysis. While primary research support for other institutions' efforts in the JACEE experiments came from NSF and DOE, primary support for the University of Alabama in Huntsville was this contract. Supplemental tasks to standardize the data base and hardware upgrades (automatized microscope) had this institutions cooperation. Investigation of new techniques in this program consisted of development of a fast calorimetry, magnetic/scattering selection of high momentum tracks for a pairmeter, and high statistics momentum measurements for low energy nuclei (E < 1 TeV/n). The highest energy calorimetry and a pairmeter have been considered as strawman instruments by the GOAL (Galactic Origin and Acceleration Limit) proposal of the NASA Cosmic Ray Working Group for long- duration balloon flights. We accomplished the objectives of the GOAL program with three circumpolar, Antarctic JACEE balloon flights during 1992 - 1994.

Evaluation of depleted uranium in the environment at Aberdeen Proving Grounds, Maryland and Yuma Proving Grounds, Arizona. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kennedy, P.L.; Clements, W.H.; Myers, O.B.

1995-01-01

This report represents an evaluation of depleted uranium (DU) introduced into the environment at the Aberdeen Proving Grounds (APG), Maryland and Yuma Proving Grounds (YPG) Arizona. This was a cooperative project between the Environmental Sciences and Statistical Analyses Groups at LANL and with the Department of Fishery and Wildlife Biology at Colorado State University. The project represents a unique approach to assessing the environmental impact of DU in two dissimilar ecosystems. Ecological exposure models were created for each ecosystem and sensitivity/uncertainty analyses were conducted to identify exposure pathways which were most influential in the fate and transport of DU inmore » the environment. Research included field sampling, field exposure experiment, and laboratory experiments. The first section addresses DU at the APG site. Chapter topics include bioenergetics-based food web model; field exposure experiments; bioconcentration by phytoplankton and the toxicity of U to zooplankton; physical processes governing the desorption of uranium from sediment to water; transfer of uranium from sediment to benthic invertebrates; spead of adsorpion by benthic invertebrates; uptake of uranium by fish. The final section of the report addresses DU at the YPG site. Chapters include the following information: Du transport processes and pathway model; field studies of performance of exposure model; uptake and elimination rates for kangaroo rates; chemical toxicity in kangaroo rat kidneys.« less

Chronic Decompression Illness Cognitive Dysfunction Improved with Hyperbaric Oxygen: A Case Report

DTIC Science & Technology

2018-11-09

Altitude chamber exposures are used for training to allow aircrew to experience their hypoxia and pressure effect symptoms. Decompression illness ...chamber decompression illness is around 0.25% (1). Because the evolution of gas within the tissue or vasculature is being treated upon recompression

Structurally compliant rocket engine combustion chamber: Experimental and analytical validation

NASA Technical Reports Server (NTRS)

Jankovsky, Robert S.; Arya, Vinod K.; Kazaroff, John M.; Halford, Gary R.

1994-01-01

A new, structurally compliant rocket engine combustion chamber design has been validated through analysis and experiment. Subscale, tubular channel chambers have been cyclically tested and analytically evaluated. Cyclic lives were determined to have a potential for 1000 percent increase over those of rectangular channel designs, the current state of the art. Greater structural compliance in the circumferential direction gave rise to lower thermal strains during hot firing, resulting in lower thermal strain ratcheting and longer predicted fatigue lives. Thermal, structural, and durability analyses of the combustion chamber design, involving cyclic temperatures, strains, and low-cycle fatigue lives, have corroborated the experimental observations.

Depopulation of Caged Layer Hens with a Compressed Air Foam System

PubMed Central

Gurung, Shailesh; Hoffman, John; Stringfellow, Kendre; Abi-Ghanem, Daad; Zhao, Dan; Caldwell, David; Lee, Jason; Styles, Darrel; Berghman, Luc; Byrd, James; Farnell, Yuhua; Archer, Gregory

2018-01-01

Simple Summary Reportable diseases, such as avian influenza, spread rapidly among poultry, resulting in the death of a large number of birds. Once such a disease has been diagnosed at a farm, infected and susceptible birds are rapidly killed to prevent the spread of the disease. The methods to eliminate infected caged laying hens are limited. An experiment was conducted to study the effectiveness of foam made from compressed air, water, and soap to kill laying hens in cages. The study found that stress levels of the hens killed using compressed air foam in cages to be similar to the hens killed by carbon dioxide or the negative control. Hens exposed to carbon dioxide died earlier as compared to the foam methods. The authors conclude that application of compressed air foam in cages is an alternative to methods such as gas inhalation and ventilation shutdown to rapidly and humanely kill laying hens during epidemics. Abstract During the 2014–2015 US highly pathogenic avian influenza (HPAI) outbreak, 50.4 million commercial layers and turkeys were affected, resulting in economic losses of $3.3 billion. Rapid depopulation of infected poultry is vital to contain and eradicate reportable diseases like HPAI. The hypothesis of the experiment was that a compressed air foam (CAF) system may be used as an alternative to carbon dioxide (CO2) inhalation for depopulating caged layer hens. The objective of this study was to evaluate corticosterone (CORT) and time to cessation of movement (COM) of hens subjected to CAF, CO2 inhalation, and negative control (NEG) treatments. In Experiment 1, two independent trials were conducted using young and spent hens. Experiment 1 consisted of five treatments: NEG, CO2 added to a chamber, a CO2 pre-charged chamber, CAF in cages, and CAF in a chamber. In Experiment 2, only spent hens were randomly assigned to three treatments: CAF in cages, CO2 added to a chamber, and aspirated foam. Serum CORT levels of young hens were not significantly different among the CAF in cages, CAF in a chamber, NEG control, and CO2 inhalation treatments. However, spent hens subjected to the CAF in a chamber had significantly higher CORT levels than birds in the rest of the treatments. Times to COM of spent hens subjected to CAF in cages and aspirated foam were significantly greater than of birds exposed to the CO2 in a chamber treatment. These data suggest that applying CAF in cages is a viable alternative for layer hen depopulation during a reportable disease outbreak. PMID:29324639

Studies of beam plasma interactions in a space simulation chamber using prototype Space Shuttle instruments

NASA Technical Reports Server (NTRS)

Banks, P. M.; Raitt, W. J.; Denig, W. F.

1982-01-01

In March, 1981, electron beam experiments were conducted in a large space simulation chamber using equipment destined to be flown aboard NASA's Office of Space Science-1 pallet (OSS-1). Two major flight experiments were involved. They include the Vehicle Charging and Potential (VCAP) experiment and the Plasma Diagnostics Package (PDP). Apparatus connected with VCAP included a Fast Pulse Electron Gun (FPEG), and a Charge and Current Probe (CCP). A preliminary view is provided of the results obtained when the electron emissions were held steady over relatively long periods of time such that steady state conditions could be obtained with respect to the electron beam interaction with the neutral gases and plasma of the vacuum chamber. Of particular interest was the plasma instability feature known as the Beam Plasma Discharge. For the present experiments the FPEG was used in a dc mode with a range of currents of 2 to 80 mA at a beam energy of 970 eV. Attention is given to the emissions of VLF and HF noise associated with the dc beam.

Seasonal variation exceeds effects of salmon carcass additions on benthic food webs in the Elwha River

USGS Publications Warehouse

Morley, S.A.; Coe, H.J.; Duda, J.J.; Dunphy, L.S.; McHenry, M.L.; Beckman, B.R.; Elofson, M.; Sampson, E. M.; Ward, L.

2016-01-01

Dam removal and other fish barrier removal projects in western North America are assumed to boost freshwater productivity via the transport of marine-derived nutrients from recolonizing Pacific salmon (Oncorhynchus spp.). In anticipation of the removal of two hydroelectric dams on the Elwha River in Washington State, we tested this hypothesis with a salmon carcass addition experiment. Our study was designed to examine how background nutrient dynamics and benthic food webs vary seasonally, and how these features respond to salmon subsidies. We conducted our experiment in six side channels of the Elwha River, each with a spatially paired reference and treatment reach. Each reach was sampled on multiple occasions from October 2007 to August 2008, before and after carcass placement. We evaluated nutrient limitation status; measured water chemistry, periphyton, benthic invertebrates, and juvenile rainbow trout (O. mykiss) response; and traced salmon-derived nutrient uptake using stable isotopes. Outside of winter, algal accrual was limited by both nitrogen and phosphorous and remained so even in the presence of salmon carcasses. One month after salmon addition, dissolved inorganic nitrogen levels doubled in treatment reaches. Two months after addition, benthic algal accrual was significantly elevated. We detected no changes in invertebrate or fish metrics, with the exception of 15N enrichment. Natural seasonal variability was greater than salmon effects for the majority of our response metrics. Yet seasonality and synchronicity of nutrient supply and demand are often overlooked in nutrient enhancement studies. Timing and magnitude of salmon-derived nitrogen utilization suggest that uptake of dissolved nutrients was favored over direct consumption of carcasses. The highest proportion of salmon-derived nitrogen was incorporated by herbivores (18–30%) and peaked 1–2 months after carcass addition. Peak nitrogen enrichment in predators (11–16%) occurred 2–3 months after addition. All taxa returned to background δ15N levels by 7 months. Since this study was conducted, both dams on the Elwha River were removed over 2011–2014 to open over 90% of the basin to anadromous fishes. We anticipate that as the full portfolio of salmon species expands through the basin, nutrient supply and demand will come into better balance.

Biological Imaging Capability in the ABRS Facility on ISS

NASA Technical Reports Server (NTRS)

Cox, David R.; Murdoch, T.; Regan, M. F.; Meshlberger, R. J.; Mortenson, T. E.; Albino, S. A.; Paul, A. L.; Ferl, R. J.

2010-01-01

This slide presentation reviews the Advanced Biological Research System (ABRS) on the International Space Station (ISS) and its biological imaging capability. The ABRS is an environmental control chamber. It has two indpendently controlled Experiment Research Chambers (ERCs) with temperature, relative humidity and carbon dioxide controls. ABRS is a third generation plant growth system. Several experiments are reviewed, with particular interest in the use of Green Fluorescent Protein (GFP) a non-destructive plant stress reporting mechanism, naturally found in jellyfish.

Variability in benthic exchange rate, depth, and residence time beneath a shallow coastal estuary

NASA Astrophysics Data System (ADS)

Russoniello, C. J.; Michael, H. A.; Heiss, J.

2017-12-01

Hydrodynamically-driven exchange of water between the water column and shallow seabed aquifer, benthic exchange, is a significant and dynamic component of coastal and estuarine fluid budgets, but wave-induced benthic exchange has not been measured in the field. Mixing between surface water and groundwater solutes promotes ecologically important chemical reactions, so quantifying benthic exchange rates, depths, and residence times, constrains estimates of coastal chemical cycling. In this study, we present the first field-based direct measurements of wave-induced exchange and compare it to exchange induced by the other primary drivers of exchange - tides, and currents. We deployed instruments in a shallow estuary to measure benthic exchange and temporal variability over an 11-day period. Differential pressure sensors recorded pressure gradients across the seabed, and up-and down-looking ADCPs recorded currents and pressures from which wave parameters, surface-water currents, and water depth were determined. Wave-induced exchange was calculated directly from 1) differential pressure measurements, and indirectly with an analytical solution based on wave parameters from 2) ADCP and 3) weather station data. Groundwater flow models were used to assess the effects of aquifer properties on benthic exchange depth and residence time. Benthic exchange driven by tidal pumping or current-bedform interaction was calculated from tidal stage variation and from ADCP-measured currents at the bed, respectively. Waves were the primary benthic exchange driver (average = 20.0 cm/d, maximum = 92.3 cm/d) during the measurement period. Benthic exchange due to tides (average = 3.7 cm/d) and current-bedform interaction (average = 6.5x10-2 cm/d) was much lower. Wave-induced exchange calculated from pressure measurements and ADCP-measured wave parameters matched well, but wind-based rates underestimated wave energy and exchange. Groundwater models showed that residence time and depth increased in high-permeability, incompressible aquifers, and exchange rates increased in low-permeability, compressible aquifers. These findings support and extend the utility of existing wave-induced exchange solutions and will help managers assess the importance of benthic exchange on coastal chemical cycling.

Demonstration of a chamber for strain mapping of steel specimens under mechanical load in a hydrogen environment by synchrotron radiation

NASA Astrophysics Data System (ADS)

Connolly, Matthew; Park, Jun-Sang; Bradley, Peter; Lauria, Damian; Slifka, Andrew; Drexler, Elizabeth

2018-06-01

We demonstrate a hydrogen gas chamber suitable for lattice strain measurements and capturing radiographs of a steel specimen under a mechanical load using high energy synchrotron x-rays. The chamber is suitable for static and cyclic mechanical loading. Experiments were conducted at the 1-ID-E end station of the Advanced Photon Source, Argonne National Laboratory. Diffraction patterns show a high signal-to-noise ratio suitable for lattice strain measurements for the specimen and with minimal scattering and overlap from the gas chamber manufactured from aluminum. In situ radiographs of a specimen in the hydrogen chamber show the ability to track a growing crack and to map the lattice strain around the crack with high spatial and strain resolution.

Lake Ontario benthic prey fish assessment, 2016

USGS Publications Warehouse

Weidel, Brian C.; Walsh, Maureen; Holden, Jeremy P.; Connerton, Michael J.

2017-01-01

Benthic prey fishes are a critical component of the Lake Ontario food web, serving as energy vectors from benthic invertebrates to native and introduced piscivores. Beginning in 1978, Lake Ontario benthic prey fishes were assessed using bottom trawls collected from the lake’s south shore (depth range: 8 – 150 m). Historically, the survey targeted the then dominant species, Slimy Sculpin, however in 2015, the Benthic Prey Fish Survey was cooperatively expanded to a whole-lake survey, to address resource management information needs related to Round Goby, Deepwater Sculpin, and nearshore native fishes. In 2016, 142 trawls were collected at 18 transects, and spanned depths from 6 – 225 m. Trawl catches indicated the benthic and demersal prey fish community was dominated by Round Goby, however the proportional importance of native Deepwater Sculpin is increasing. Species-specific assessments found lake-wide Round Goby density (~600 fish per hectare) was slightly lower in 2016 relative to 2015. Deepwater Sculpin density has generally increased since 2004. In 2016 their estimated density was greater than 100 fish per hectare. Slimy Sculpin density (15 fish/ha) was similar to the past 3 years. Catches of juvenile Slimy Sculpin continue to be low relative to historic catches and the timing of their decline coincides with the proliferation of Round Goby. Additionally, we found a strong negative relationship between trawl catches of Round Goby and near-shore native benthic and demersal fishes such as Trout-perch, Johnny Darter and Spottail Shiner. The introduction of Round Goby and the reappearance of native Deepwater Sculpin have shaped the Lake Ontario benthic prey fish community.

Benthic foraminifera at the Cretaceous-Tertiary boundary around the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Alegret, Laia; Molina, Eustoquio; Thomas, Ellen

2001-10-01

Cretaceous-Tertiary (K-T) boundary sections in northeastern Mexico contain marly formations separated by a controversial clastic unit. Benthic foraminifera in seven sections indicate middle and lower bathyal depths of deposition for the marls, with the exception of the upper bathyal northernmost section. Mixed neritic-bathyal faunas were present in the clastic unit, indicating redeposition in the deep basin by mass-wasting processes resulting from the K-T bolide impact in the Gulf of Mexico. Benthic foraminifera in the Mexican sections, and at other deep-sea locations, were not subject to major extinction at the time of impact, but there were temporary changes in assemblage composition. Benthic faunas indicate well- oxygenated bottom waters and mesotrophic conditions during the late Maastrichtian and increased food supply during the latest Maastrichtian. The food supply decreased drastically just after the K-T boundary, possibly because of the collapse of surface productivity. Cretaceous and early Paleogene benthic foraminifera, however, did not exhibit the benthic-pelagic coupling of present-day faunas, as documented by the lack of significant extinction at the K-T collapse of surface productivity. Much of the food supplied to the benthic faunas along this continental margin might have been refractory material transported from land or shallow coastal regions. The decrease in food supply at the K-T boundary might be associated with the processes of mass wasting, which removed surface, food-rich sediment. Benthic faunas show a staggered pattern of faunal recovery in the lowermost Paleogene, consistent with a staged recovery of the vertical organic flux but also with a gradual buildup of organic matter in the sediment.

Long-term, High Frequency, High Precision pH Measurements on the MBARI deep-water FOCE Experiment at the MARS Cabled Observatory in Monterey Bay, CA

NASA Astrophysics Data System (ADS)

Peltzer, E. T.; Maughan, T.; Barry, J. P.; Brewer, P. G.; Headley, K. L.; Herlien, R.; Kirkwood, W. J.; Matsumoto, G. I.; O'Reilly, T. C.; Salamy, K. A.; Scholfield, J.; Shane, F. F.; Walz, P. M.

2012-12-01

The MBARI deep-water FOCE experiment was deployed on the MARS cabled observatory in Monterey Bay on May 4th, 2011. It has been in continuous operation (excluding a few minor shore based power outages) ever since. During the fifteen months of deployment, we have been able to observe both the daily variation in pH in response to water mass movements associated with the semi-diurnal tides, internal waves and longer-term trends as a function of the seasonal variations in the water masses within the Monterey Bay Canyon. Our experimental site is located at 890 meters, just below the oxygen minimum for Monterey Bay, and we clearly see the anticipated inverse correlation between seawater temperature and pH. Daily variation in pH is on the order of 0.020-0.030 pH units with longer term trends adding an additional variation of similar magnitude. Instrumentation on this experiment included two CTDs with oxygen sensors (Sea-Bird 52). One CTD is mounted on the external FOCE framework to measure the background conditions, and one CTD is installed within the FOCE pH control area to monitor the experimentally manipulated conditions. In addition, 6 MBARI modified Sea-Bird 18 pH sensors were mounted on the FOCE apparatus. Four of these pH sensors monitored pH inside the experimental chamber and two monitored the external background seawater conditions. Although we originally intended to conduct several in situ CO2 enrichment experiments to study the impact of ocean acidification on the benthic biology and then recover the apparatus after one year, unanticipated changes in the ship schedule have left the FOCE experiment in place for nearly fifteen months at the time of this writing. Throughout this time period, all sensor data has been logged by the MBARI Shore-Side Data System (SSDS) resulting in the longest continuous record of high precision pH measurements in the intermediate water column. We present an analysis of the data obtained from this unique data set, and discuss our in-situ calibration techniques used to compensate for long term sensor drift associated with the reference electrode.

Ultra-low mass drift chambers

NASA Astrophysics Data System (ADS)

Assiro, R.; Cappelli, L.; Cascella, M.; De Lorenzis, L.; Grancagnolo, F.; Ignatov, F.; L'Erario, A.; Maffezzoli, A.; Miccoli, A.; Onorato, G.; Perillo, M.; Piacentino, G.; Rella, S.; Rossetti, F.; Spedicato, M.; Tassielli, G.; Zavarise, G.

2013-08-01

We present a novel low mass drift chamber concept, developed in order to fulfill the stringent requirements imposed by the experiments for extremely rare processes, which require high resolutions (order of 100-200 keV/c) for particle momenta in a range (50-100 MeV/c) totally dominated by the multiple scattering contribution. We describe a geometry optimization procedure and a new wiring strategy with a feed-through-less wire anchoring system developed and tested on a drift chamber prototype under completion at INFN-Lecce .

The response of ionization chambers to relativistic heavy nuclei

NASA Technical Reports Server (NTRS)

Newport, B. J.; Stone, E. C.; Waddington, C. J.; Binns, W. R.; Fixsen, D. J.; Garrard, T. L.; Grimm, G.; Israel, M. H.; Klarmann, J.

1985-01-01

As part of a recent calibration at the LBL Bevalac for the Heavy Nuclei Experiment on HEAO-3, the response of a set of laboratory ionization chambers were compared to beams of 26Fe, 36 Kr, 54Xe, 67 Ho, and 79 Au nuclei at maximum energies ranging from 1666 MeV/amu for Fe to 1049 MeV/amu for Au. The response of these chambers shows a significant deviation from the expected energy dependence, but only a slight deviation from Z squared scaling.

A novel environmental chamber for neuronal network multisite recordings.

PubMed

Biffi, E; Regalia, G; Ghezzi, D; De Ceglia, R; Menegon, A; Ferrigno, G; Fiore, G B; Pedrocchi, A

2012-10-01

Environmental stability is a critical issue for neuronal networks in vitro. Hence, the ability to control the physical and chemical environment of cell cultures during electrophysiological measurements is an important requirement in the experimental design. In this work, we describe the development and the experimental verification of a closed chamber for multisite electrophysiology and optical monitoring. The chamber provides stable temperature, pH and humidity and guarantees cell viability comparable to standard incubators. Besides, it integrates the electronics for long-term neuronal activity recording. The system is portable and adaptable for multiple network housings, which allows performing parallel experiments in the same environment. Our results show that this device can be a solution for long-term electrophysiology, for dual network experiments and for coupled optical and electrical measurements. Copyright © 2012 Wiley Periodicals, Inc.

Phototoxicity of TiO2 nanoparticles to a freshwater benthic amphipod: are benthic systems at risk?

EPA Science Inventory

This study investigated phototoxicity of TiO2 nanoparticles (nano-TiO2) to a freshwater benthic amphipod (Hyalella azteca) using 48-h and 96-h bioassays. Thorough monitoring of particle interactions with exposure media (Lake Superior water, LSW) and the surface of organisms was p...

BENTHIC MICROALGAL CONTROL ON THE NUTRIENT FLUX IN INTER-TIDAL FLATS OF THE LOWER YAQUINA ESTUARY, OREGON

EPA Science Inventory

Three sites were selected across the intertidal zone of the lower Yaquina Bay to investigate the role of benthic microalgae in benthic nutrient fluxes. Study sites were selected where microalage were present but without seagrass or mud shrimp. Sediment columns were collected th...

Development of a regional littoral benthic macroinvertebrate multi-metric index (MMI) for lakes from the National Lakes Assessment

EPA Science Inventory

During the 2007 National Lakes Assessment (NLA) benthic macroinvertebrate samples were collected from the lake littoral zone. The purpose of the sampling was to assess the feasibility of a multi-metric index (MMI) to assess the condition of the littoral benthic macroinvertebrate...

ALLOMETRIC LENGTH-WEIGHT RELATIONSHIPS FOR BENTHIC PREY OF AQUATIC WILDLIFE IN COASTAL MARINE HABITATS

EPA Science Inventory

We developed models to estimate the soft tissue content of benthic marine invertebrates that are prey for aquatic wildlife. Allometric regression models of tissue wet weight with shell length for 10 species of benthic invertebrates had r2 values ranging from 0.29 for hermit crabs...

Ecological periodic tables for benthic macrofaunal usage of estuarine habitats : Insights from a case study in Tillamook bay, Oregon, USA

EPA Science Inventory

This study validates the ecological relevance of estuarine habitat types to the benthic macrofaunal community and, together with previous similar studies, suggests they can serve as elements in ecological periodic tables of benthic macrofaunal usage in the bioregion. We compared...

A MORE COST-EFFECTIVE EMAP-W BENTHIC MACROFAUNAL SAMPLE UNIT

EPA Science Inventory

The standard EPA West Coast Environmental Monitoring and Assessment Program (EMAP-W) benthic macrofaunal sampling protocol is to collect 30-50 random benthic samples per reporting unit (e.g., estuary, region) using a 0.1 m2 grab and to sort out macrofauna using a 1.0 mm mesh scre...

Deep-Water Benthic Foraminifers from the Paleocene and Eocene of the North Pacific Region: Paleontology, Biostratigraphy, and Paleoceanological Reconstructions

NASA Astrophysics Data System (ADS)

Olshanetskiy, D. M.

2015-12-01

A zonal scheme for the Lower Paleogene of the northern Pacific Ocean is proposed on the basis of the stratigraphic distribution of benthic foraminifers in the lower bathyal-abyssal beds studied in boreholes in the North and South Pacific regions. This scheme includes eight subdivisions (six zones and two subzones). The boundaries of the benthic zonal subdivisions are defined by bioevents (appearance or disappearance of stratigraphically important taxa) and are linked to the zonal scales based on planktonic foraminifers and calcareous nannoplankton. It is established that most of these bioevents are recognized subglobally. Apart from the evolutionary events, changes in the deep-water benthic foraminiferal assemblages were caused by changes in the paleooceanological environment. This allowed detailed characterization of a global mass extinction of assemblages of deep-water benthic foraminifers in the region studied. It is also established that changes in the assemblages of deep-water benthic foraminifers, observed in either change in their taxonomic composition or changes in abundance and diversity, resulted from the presence of different deep-water masses in the region.

Taxonomic diversity and structure of benthic macroinvertebrates in Aby Lagoon (Ivory Coast, West Africa).

PubMed

Kouadio, K N; Diomandé, D; Ouattara, A; Koné, Y J M; Gourène, G

2008-09-15

The benthic macroinvertebrates of Aby lagoon (West Africa: Ivory coast) was studied during four seasons (high dry season, high rainy season, low dry season and low rainy season, respectively) from June 2006 to March 2007. The distribution of the benthic macroinvertebrates species was recorded at 13 stations on the whole of the lagoon. A total of 62 taxa of benthic macroinvertebrates belonging to 28 families and 10 orders were listed. The molluscs and crustaceans dominate qualitatively by adding up 51 and 24%, respectively of the total number of organisms. Five taxa (Corbula trigona (20%), Pachymelania aurita (12%), Clibernhardius cooki (7%), Oligochaeta (7%) and Crassostrea gasar (6%) accounted for 52% of total abundance. Classification analysis used to perform the characterisation of the lagoon on the basis of benthic macroinvertebrates showed the existence of four main clusters in which the seasonal pattern in benthic macroinvertebrates were very similar in the four seasons. In contrast the species richness and diversity indices were significantly different. Furthermore these indices where higher in the stations closer to the sea and surrounded by mangrove trees (southern area) compared to the inland ones.

Volume 90, Issue1 (February 2005)Articles in the Current Issue:Original PaperSeasonal Dynamics of Benthic and Planktonic Algae in a Nutrient-Rich Lowland River (Spree, Germany)

NASA Astrophysics Data System (ADS)

Werner, Petra; Köhler, Jan

2005-02-01

We studied chlorophyll a (chl. a), biovolume and species composition of benthic algae and phytoplankton in the eutrophic lower River Spree in 1996. The chl. a concentration was estimated as 3.5 (2.7-4.5) μg/cm2 for epipsammon, 9.4 (7.4-11.9) μg/cm2 for epipelon and 6.7 (5.7-7.8) μg/cm2 for the epilithon (median and 95% C. L.). The mean total biomass of benthic algae was significantly higher (6.0 μg chl. a/cm2) than the areal chl. a content of the pelagic zone (1.6 μg chl. a/cm²). Although certain phytoplankton taxa were abundant in the periphyton, benthic taxa generally dominated the assemblages. Seasonal dynamics of benthic algae were probably controlled by light and nitrate supply (sand), discharge fluctuations (sand, mud) and invertebrate grazing (stones). This paper shows the importance of benthic algae even in phytoplankton-rich lowland rivers with sandy or muddy sediments.

Inorganic carbon availability in benthic diatom communities: photosynthesis and migration.

PubMed

Marques da Silva, Jorge; Cruz, Sónia; Cartaxana, Paulo

2017-09-05

Diatom-dominated microphytobenthos (MPB) is the main primary producer of many intertidal and shallow subtidal environments, being therefore of critical importance to estuarine and coastal food webs. Owing to tidal cycles, intertidal MPB diatoms are subjected to environmental conditions far more variable than the ones experienced by pelagic diatoms (e.g. light, temperature, salinity, desiccation and nutrient availability). Nevertheless, benthic diatoms evolved adaptation mechanisms to these harsh conditions, including the capacity to move within steep physical and chemical gradients, allowing them to perform photosynthesis efficiently. In this contribution, we will review present knowledge on the effects of dissolved inorganic carbon (DIC) availability on photosynthesis and productivity of diatom-dominated MPB. We present evidence of carbon limitation of photosynthesis in benthic diatom mats and highly productive MPB natural communities. Furthermore, we hypothesize that active vertical migration of epipelic motile diatoms could overcome local depletion of DIC in the photic layer, providing the cells alternately with light and inorganic carbon supply. The few available longer-term experiments on the effects of inorganic carbon enrichment on the productivity of diatom-dominated MPB have yielded inconsistent results. Therefore, further studies are needed to properly assess the response of MPB communities to increased CO 2 and ocean acidification related to climate change.This article is part of the themed issue 'The peculiar carbon metabolism in diatoms'. © 2017 The Author(s).

Interactive effects of nutrient additions and predation on infaunal communities

USGS Publications Warehouse

Posey, M.H.; Alphin, T.D.; Cahoon, L.; Lindquist, D.; Becker, M.E.

1999-01-01

Nutrient additions represent an important anthropogenic stress on coastal ecosystems. At moderate levels, increased nutrients may lead to increased primary production and, possibly, to increased biomass of consumers although complex trophic interactions may modify or mask these effects. We examined the influence of nutrient additions and interactive effects of trophic interactions (predation) on benthic infaunal composition and abundances through small-scale field experiments in 2 estuaries that differed in ambient nutrient conditions. A blocked experimental design was used that allowed an assessment of direct nutrient effects in the presence and absence of predation by epibenthic predators as well as an assessment of the independent effects of predation. Benthic microalgal production increased with experimental nutrient additions and was greater when infaunal abundances were lower, but there were no significant interactions between these factors. Increased abundances of one infaunal taxa, Laeonereis culveri, as well as the grazer feeding guild were observed with nutrient additions and a number of taxa exhibited higher abundances with predator exclusion. In contrast to results from freshwater systems there were no significant interactive effects between nutrient additions and predator exclusion as was predicted. The infaunal responses observed here emphasize the importance of both bottom-up (nutrient addition and primary producer driven) and top-down (predation) controls in structuring benthic communities. These processes may work at different spatial and temporal scales, and affect different taxa, making observation of potential interactive effects difficult.

Organic matter degradation drives benthic cyanobacterial mat abundance on Caribbean coral reefs.

PubMed

Brocke, Hannah J; Polerecky, Lubos; de Beer, Dirk; Weber, Miriam; Claudet, Joachim; Nugues, Maggy M

2015-01-01

Benthic cyanobacterial mats (BCMs) are impacting coral reefs worldwide. However, the factors and mechanisms driving their proliferation are unclear. We conducted a multi-year survey around the Caribbean island of Curaçao, which revealed highest BCM abundance on sheltered reefs close to urbanised areas. Reefs with high BCM abundance were also characterised by high benthic cover of macroalgae and low cover of corals. Nutrient concentrations in the water-column were consistently low, but markedly increased just above substrata (both sandy and hard) covered with BCMs. This was true for sites with both high and low BCM coverage, suggesting that BCM growth is stimulated by a localised, substrate-linked release of nutrients from the microbial degradation of organic matter. This hypothesis was supported by a higher organic content in sediments on reefs with high BCM coverage, and by an in situ experiment which showed that BCMs grew within days on sediments enriched with organic matter (Spirulina). We propose that nutrient runoff from urbanised areas stimulates phototrophic blooms and enhances organic matter concentrations on the reef. This organic matter is transported by currents and settles on the seabed at sites with low hydrodynamics. Subsequently, nutrients released from the organic matter degradation fuel the growth of BCMs. Improved management of nutrients generated on land should lower organic loading of sediments and other benthos (e.g. turf and macroalgae) to reduce BCM proliferation on coral reefs.

Hadrons registration in emulsion chamber with carbon block

NASA Technical Reports Server (NTRS)

Tomaszewski, A.; Wlodarczyk, Z.

1985-01-01

Nuclear-electro-magnetic cascade (NEC) in X-ray emulsion chambers with carbon block, which are usually used in the Pamir experiment, was Monte-Carlo simulated. Going over from optical density to Summary E sub gamma is discussed. The hole of NEC in the interpretation of energy spectra is analyzed.

Documentation and Development. Experience in Algeria

ERIC Educational Resources Information Center

Tchuigoua, J. Founou

1972-01-01

A description of the activities of the Documentation, Library and Archives Department of the Algiers Chamber of Commerce and Industry, which is run by a small staff on a modest budget, provides documentation services for the staff of the Chamber of Commerce and also assists other centers in Algeria. (Author)

EMISSIONS OF TRACE PRODUCTS OF INCOMPLETE COMBUSTION FROM A PILOT-SCALE INCINERATOR SECONDARY COMBUSTION CHAMBER

EPA Science Inventory

Experiments were performed on a 73 kW rotary kiln incinerator simulator equipped with a 73 kW secondary combustion chamber (SCC) to examine emissions of products of incomplete combustion (PICs) resulting from incineration of carbon tetrachloride (CCl₄) and dichlorometh...

Is Climate Simulation in Growth Chambers Necessary?

Treesearch

Z.M. Wang; K.H. Johnsen; M.J. Lechowicz

1999-01-01

In the expression of their genetic potential as phenotypes, trees respond to environmental cues such as photoperiod, temperature and soil and atmospheric water. However, growth chamber experiments often utilize simple and standard environmental conditions that might not provide these important environmental signals. We conducted a study to compare seedling growth in...

Seed Planting in Veggie Pillows

NASA Image and Video Library

2017-08-08

Water and nutrients are being added to plants in the Veggie hardware in NASA Kennedy Space Center's ISS environment simulator chamber. Mizuna mustard, Outredgeous lettuce and Waldmann's green lettuce are growing in Veggie. Growth in the chamber mimics the growth of plant experiments in the Veggie plant growth system on the International Space Station.

Soil matrix tracer contamination and canopy recycling did not impair ¹³CO₂ plant-soil pulse labelling experiments.

PubMed

Barthel, Matthias; Sturm, Patrick; Knohl, Alexander

2011-09-01

When conducting (13)CO(2) plant-soil pulse labelling experiments, tracer material might cause unwanted side effects which potentially affect δ(13)C measurements of soil respiration (δ(13)C(SR)) and the subsequent data interpretation. First, when the soil matrix is not isolated from the atmosphere, contamination of the soil matrix with tracer material occurs leading to a physical back-diffusion from soil pores. Second, when using canopy chambers continuously, (13)CO(2) is permanently re-introduced into the atmosphere due to leaf respiration which then aids re-assimilation of tracer material by the canopy. Accordingly, two climate chamber experiments on European beech saplings (Fagus sylvatica L.) were conducted to evaluate the influence of soil matrix (13)CO(2) contamination and canopy recycling on soil (13)CO(2) efflux during (13)CO(2) plant-soil pulse labelling experiments. For this purpose, a combined soil/canopy chamber system was developed which separates soil and canopy compartments in order to (a) prevent diffusion of (13)C tracer into the soil chamber during a (13)CO(2) canopy pulse labelling and (b) study stable isotope processes in soil and canopy individually and independently. In combination with laser spectrometry measuring CO(2) isotopologue mixing ratios at a rate of 1 Hz, we were able to measure δ(13)C in canopy and soil at very high temporal resolution. For the soil matrix contamination experiment, (13)CO(2) was applied to bare soil, canopy only or, simultaneously, to soil and canopy of the beech trees. The obtained δ(13)C(SR) fluxes from the different treatments were then compared with respect to label re-appearance, first peak time and magnitude. By determining the δ(13)C(SR) decay of physical (13)CO(2) back-diffusion from bare soils (contamination), it was possible to separate biological and physical components in δ(13)C(SR) of a combined flux of both. A second pulse labelling experiment, with chambers permanently enclosing the canopy, revealed that (13)CO(2) recycling at canopy level had no effect on δ(13)C(SR) dynamics.

Effects of salt pond restoration on benthic flux: Sediment as a source of nutrients to the water column

USGS Publications Warehouse

Topping, Brent R.; Kuwabara, James S.; Carter, James L.; Garrettt, Krista K.; Mruz, Eric; Piotter, Sarah; Takekawa, John Y.

2016-01-01

Understanding nutrient flux between the benthos and the overlying water (benthic flux) is critical to restoration of water quality and biological resources because it can represent a major source of nutrients to the water column. Extensive water management commenced in the San Francisco Bay, Beginning around 1850, San Francisco Bay wetlands were converted to salt ponds and mined extensively for more than a century. Long-term (decadal) salt pond restoration efforts began in 2003. A patented device for sampling porewater at varying depths, to calculate the gradient, was employed between 2010 and 2012. Within the former ponds, the benthic flux of soluble reactive phosphorus and that of dissolved ammonia were consistently positive (i.e., moving out of the sediment into the water column). The lack of measurable nitrate or nitrite concentration gradients across the sediment-water interface suggested negligible fluxes for dissolved nitrate and nitrite. The dominance of ammonia in the porewater indicated anoxic sediment conditions, even at only 1 cm depth, which is consistent with the observed, elevated sediment oxygen demand. Nearby openestuary sediments showed much lower benthic flux values for nutrients than the salt ponds under resortation. Allochthonous solute transport provides a nutrient advective flux for comparison to benthic flux. For ammonia, averaged for all sites and dates, benthic flux was about 80,000 kg/year, well above the advective flux range of −50 to 1500 kg/year, with much of the variability depending on the tidal cycle. By contrast, the average benthic flux of soluble reactive phosphorus was about 12,000 kg/year, of significant magnitude, but less than the advective flux range of 21,500 to 30,000 kg/year. These benthic flux estimates, based on solute diffusion across the sediment-water interface, reveal a significant nutrient source to the water column of the pond which stimulates algal blooms (often autotrophic). This benthic source may be augmented further by bioturbation, bioirrigation and episodic sediment resuspension events.

Ecosystem characteristics and processes facilitating persistent macrobenthic biomass hotspots and associated benthivory in the Pacific Arctic

NASA Astrophysics Data System (ADS)

Grebmeier, Jacqueline M.; Bluhm, Bodil A.; Cooper, Lee W.; Danielson, Seth L.; Arrigo, Kevin R.; Blanchard, Arny L.; Clarke, Janet T.; Day, Robert H.; Frey, Karen E.; Gradinger, Rolf R.; Kędra, Monika; Konar, Brenda; Kuletz, Kathy J.; Lee, Sang H.; Lovvorn, James R.; Norcross, Brenda L.; Okkonen, Stephen R.

2015-08-01

The northern Bering and Chukchi Seas are areas in the Pacific Arctic characterized by high northward advection of Pacific Ocean water, with seasonal variability in sea ice cover, water mass characteristics, and benthic processes. In this review, we evaluate the biological and environmental factors that support communities of benthic prey on the continental shelves, with a focus on four macrofaunal biomass "hotspots." For the purpose of this study, we define hotspots as macrofaunal benthic communities with high biomass that support a corresponding ecological guild of benthivorous seabird and marine mammal populations. These four benthic hotspots are regions within the influence of the St. Lawrence Island Polynya (SLIP), the Chirikov Basin between St. Lawrence Island and Bering Strait (Chirikov), north of Bering Strait in the southeast Chukchi Sea (SECS), and in the northeast Chukchi Sea (NECS). Detailed benthic macrofaunal sampling indicates that these hotspot regions have been persistent over four decades of sampling due to annual reoccurrence of seasonally consistent, moderate-to-high water column production with significant export of carbon to the underlying sediments. We also evaluate the usage of the four benthic hotspot regions by benthic prey consumers to illuminate predator-prey connectivity. In the SLIP hotspot, spectacled eiders and walruses are important winter consumers of infaunal bivalves and polychaetes, along with epibenthic gastropods and crabs. In the Chirikov hotspot, gray whales have historically been the largest summer consumers of benthic macrofauna, primarily feeding on ampeliscid amphipods in the summer, but they are also foraging further northward in the SECS and NECS hotspots. Areas of concentrated walrus foraging occur in the SLIP hotspot in winter and early spring, the NECS hotspot in summer, and the SECS hotspot in fall. Bottom up forcing by hydrography and food supply to the benthos influences persistence and composition of benthic prey that then influences the distributions of benthivorous upper trophic level populations.

Do Changes in Current Flow as a Result of Arrays of Tidal Turbines Have an Effect on Benthic Communities?

PubMed

Kregting, Louise; Elsaesser, Bjoern; Kennedy, Robert; Smyth, David; O'Carroll, Jack; Savidge, Graham

2016-01-01

Arrays of tidal energy converters have the potential to provide clean renewable energy for future generations. Benthic communities may, however, be affected by changes in current speeds resulting from arrays of tidal converters located in areas characterised by strong currents. Current speed, together with bottom type and depth, strongly influence benthic community distributions; however the interaction of these factors in controlling benthic dynamics in high energy environments is poorly understood. The Strangford Lough Narrows, the location of SeaGen, the world's first single full-scale, grid-compliant tidal energy extractor, is characterised by spatially heterogenous high current flows. A hydrodynamic model was used to select a range of benthic community study sites that had median flow velocities between 1.5-2.4 m/s in a depth range of 25-30 m. 25 sites were sampled for macrobenthic community structure using drop down video survey to test the sensitivity of the distribution of benthic communities to changes in the flow field. A diverse range of species were recorded which were consistent with those for high current flow environments and corresponding to very tide-swept faunal communities in the EUNIS classification. However, over the velocity range investigated, no changes in benthic communities were observed. This suggested that the high physical disturbance associated with the high current flows in the Strangford Narrows reflected the opportunistic nature of the benthic species present with individuals being continuously and randomly affected by turbulent forces and physical damage. It is concluded that during operation, the removal of energy by marine tidal energy arrays in the far-field is unlikely to have a significant effect on benthic communities in high flow environments. The results are of major significance to developers and regulators in the tidal energy industry when considering the environmental impacts for site licences.

Spatial Variability of Benthic-Pelagic Coupling in an Estuary Ecosystem: Consequences for Microphytobenthos Resuspension Phenomenon

PubMed Central

Ubertini, Martin; Lefebvre, Sébastien; Gangnery, Aline; Grangeré, Karine; Le Gendre, Romain; Orvain, Francis

2012-01-01

The high degree of physical factors in intertidal estuarine ecosystem increases material processing between benthic and pelagic compartments. In these ecosystems, microphytobenthos resuspension is a major phenomenon since its contribution to higher trophic levels can be highly significant. Understanding the sediment and associated microphytobenthos resuspension and its fate in the water column is indispensable for measuring the food available to benthic and pelagic food webs. To identify and hierarchize the physical/biological factors potentially involved in MPB resuspension, the entire intertidal area and surrounding water column of an estuarine ecosystem, the Bay des Veys, was sampled during ebb tide. A wide range of physical parameters (hydrodynamic regime, grain size of the sediment, and suspended matter) and biological parameters (flora and fauna assemblages, chlorophyll) were analyzed to characterize benthic-pelagic coupling at the bay scale. Samples were collected in two contrasted periods, spring and late summer, to assess the impact of forcing variables on benthic-pelagic coupling. A mapping approach using kriging interpolation enabled us to overlay benthic and pelagic maps of physical and biological variables, for both hydrological conditions and trophic indicators. Pelagic Chl a concentration was the best predictor explaining the suspension-feeders spatial distribution. Our results also suggest a perennial spatio-temporal structure of both benthic and pelagic compartments in the ecosystem, at least when the system is not imposed to intense wind, with MPB distribution controlled by both grain size and bathymetry. The benthic component appeared to control the pelagic one via resuspension phenomena at the scale of the bay. Co-inertia analysis showed closer benthic-pelagic coupling between the variables in spring. The higher MPB biomass observed in summer suggests a higher contribution to filter-feeders diets, indicating a higher resuspension effect in summer than in spring, in turn suggesting an important role of macrofauna bioturbation and filter feeding (Cerastoderma edule). PMID:22952910

Do Changes in Current Flow as a Result of Arrays of Tidal Turbines Have an Effect on Benthic Communities?

PubMed Central

Kregting, Louise; Elsaesser, Bjoern; Kennedy, Robert; Smyth, David; O’Carroll, Jack; Savidge, Graham

2016-01-01

Arrays of tidal energy converters have the potential to provide clean renewable energy for future generations. Benthic communities may, however, be affected by changes in current speeds resulting from arrays of tidal converters located in areas characterised by strong currents. Current speed, together with bottom type and depth, strongly influence benthic community distributions; however the interaction of these factors in controlling benthic dynamics in high energy environments is poorly understood. The Strangford Lough Narrows, the location of SeaGen, the world’s first single full-scale, grid-compliant tidal energy extractor, is characterised by spatially heterogenous high current flows. A hydrodynamic model was used to select a range of benthic community study sites that had median flow velocities between 1.5–2.4 m/s in a depth range of 25–30 m. 25 sites were sampled for macrobenthic community structure using drop down video survey to test the sensitivity of the distribution of benthic communities to changes in the flow field. A diverse range of species were recorded which were consistent with those for high current flow environments and corresponding to very tide-swept faunal communities in the EUNIS classification. However, over the velocity range investigated, no changes in benthic communities were observed. This suggested that the high physical disturbance associated with the high current flows in the Strangford Narrows reflected the opportunistic nature of the benthic species present with individuals being continuously and randomly affected by turbulent forces and physical damage. It is concluded that during operation, the removal of energy by marine tidal energy arrays in the far-field is unlikely to have a significant effect on benthic communities in high flow environments. The results are of major significance to developers and regulators in the tidal energy industry when considering the environmental impacts for site licences. PMID:27560657

Quantification of the Bioturbation Activity of Lumbriculus Variegatus Worms Using Fluorescent Particulate Tracers

NASA Astrophysics Data System (ADS)

Hernandez-Gonzalez, L. M.; Roche, K. R.; Xie, M.; Packman, A. I.

2014-12-01

Important biological, physical and chemical processes, such as fluxes of oxygen, nutrients and contaminants, occur across sediment-water interfaces. These processes are influenced by bioturbation activities of benthic animals. Bioturbation is thought to be significant in releasing metals to the water column from contaminated sediments, but metals contamination also affects organism activity. Consequently, the aim of this study was to consider the interactions of biological activity, sediment chemistry, pore water transport, and chemical reactions in sediment mixing and the flux and toxicity of metals in sediments. Prior studies have modeled bioturbation as a diffusive process. However, diffusion models often do not describe accurately sediment mixing due to bioturbation. To this end, we used the continuous time random walk (CTRW) model to assess sediment mixing caused by bioturbation activity of Lumbriculus variegatus worms. We performed experiments using fine-grained sediments with different levels of zinc contamination from Lake DePue, which is a Superfund Site in Illinois. The tests were conducted in an aerated fresh water chamber. Fluorescent particulate tracers were added to the sediment surface to quantify mixing processes and the influence of metals contaminants on L. variegatus bioturbation activity. We observed sediment mixing and organism activity by time-lapse photography over 14 days. Then, we analyzed the images to characterize the fluorescent particle concentration as a function of sediment depth and time. Results reveal that sediment mixing caused by L. variegatus is subdiffusive in time and superdiffusive in space. These results suggest that anomalous sediment mixing is probably a ubiquitous process, as this behavior has only been observed previously in marine sediments. Also, the experiments indicate that bioturbation and sediment mixing decreased in the presence of higher metals concentrations in sediments. This process is expected to decrease efflux of metals from highly contaminated sediments by reducing biological activity.

Atom chip apparatus for experiments with ultracold rubidium and potassium gases

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ivory, M. K.; Ziltz, A. R.; Fancher, C. T.

2014-04-15

We present a dual chamber atom chip apparatus for generating ultracold {sup 87}Rb and {sup 39}K atomic gases. The apparatus produces quasi-pure Bose-Einstein condensates of 10{sup 4} {sup 87}Rb atoms in an atom chip trap that features a dimple and good optical access. We have also demonstrated production of ultracold {sup 39}K and subsequent loading into the chip trap. We describe the details of the dual chamber vacuum system, the cooling lasers, the magnetic trap, the multicoil magnetic transport system, the atom chip, and two optical dipole traps. Due in part to the use of light-induced atom desorption, the lasermore » cooling chamber features a sufficiently good vacuum to also support optical dipole trap-based experiments. The apparatus is well suited for studies of atom-surface forces, quantum pumping and transport experiments, atom interferometry, novel chip-based traps, and studies of one-dimensional many-body systems.« less

Interpreting benthic oxygen levels in mudrocks: A new approach

NASA Astrophysics Data System (ADS)

Wignall, Paul B.; Myers, Keith J.

1988-05-01

Quantified paleoecology and gamma-ray spectrometry have been applied in the analysis of the Kimmeridge Clay, a highly organic-rich British Jurassic mudrock. Decreasing benthic oxygen trends are reflected in decreasing species richness and dominance-diversity values. Similarly, the degree of fragmentation of the benthos reflects the benthic energy levels and covaries with benthic oxygen. The calculation of authigenic uranium values from data gathered by gamma-ray spectrometry shows enrichment in more oxygen-deficient environments. The good correlation between the independently derived paleoecological and authigenic U data indicates the importance of these techniques in environmental analysis of marine petroleum source rocks.

Long-term benthic monitoring studies in the freshwater portion of the Potomac River - first annual report. Volume 3. Appendices. Report for September 1982-December 1983

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vannote, R.L.; Sweeney, B.W.

1985-02-28

The report summarizes the results of the first year of a long-term study of the benthic macroinvertebrate fauna of the freshwater portion of the Potomac River extending from Dam No.5 near Williamsport, Maryland downstream to Seneca Pool near Seneca, Maryland. The primary objective of the study was to evaluate long-term trends in the distribution, abundance, and biomass of benthic macroinvertebrates and identify factors controlling the benthic populations, with particular emphasis on factors associated with existing power plant effluents within the study area.

Long-term benthic monitoring studies in the freshwater portion of the Potomac River - first annual report. Volume 1. Text. Report for September 1982-December 1983

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vannote, R.L.; Sweeney, B.W.

1985-02-28

The report summarizes the results of the first year of a long-term study of the benthic macroinvertebrate fauna of the freshwater portion of the Potomac River extending from Dam No. 5 near Williamsport, Maryland downstream to Seneca Pool near Seneca, Maryland. The primary objective of the study was to evaluate long-term trends in the distribution, abundance, and biomass of benthic macroinvertebrates and identify factors controlling the benthic populations, with particular emphasis on factors associated with existing power plant effluents within the study area.

Gulf Coast Deep Water Port Facilities Study. Appendix C. Eastern Gulf Hydrobiological Zones.

DTIC Science & Technology

1973-04-01

MARINE 5IOTA C-22 1. Benthic Plants C-22 2. Plankton C;23 3. Benthic Invertebrates C-27 4. Fish C-33 5. Marine Mammals C-35 6. Marine Birds C-37 7. Rare...56 B. RESIDENT AND TRANSIENT MARINE BIOTA C-56 1. Plankton C-56 2. Benthic Invertebrates C-62 3. Fish C-62 4. Marine Mammals C-684 Artur D Little Inc...TRANSIENT MARINE BIOTA C-78 l.-Plankton C-78 .-2. Benthic Invertebrates C8 3. F ish C-81 4. Marine Mammals C-85 V. ZONAL ANALYSIS C-87 A. ZONE V

Preliminary results from a shallow water benthic grazing study

USGS Publications Warehouse

Jones, N.L.; Monismith, Stephen G.; Thompson, Janet K.

2005-01-01

Despite great improvements in our knowledge on the effects of benthic grazers on seston concentrations in water columns, the effects of different hydrodynamic conditions on grazing rates has not been formulated. This makes it difficult to assess the system-wide effect of the benthic ecosystem on phytoplankton concentrations. Furthermore, it affects our ability to predict the potential success of a benthic species, such as the invasive clams Corbicula fluminea and Potamocorbula amurensis. This paper presents the preliminary results of a control volume approach to elucidate the effect of different hydrodynamic conditions on the grazing rates of Corbicula fluminea.

The Swimming Ammonite: How Computed Tomography can Address Questions of Functional Morphology

NASA Astrophysics Data System (ADS)

Lemanis, Robert; Hoffmann, Rene; Zachow, Stefan

2014-05-01

The external shell of the ammonite is a readily recognized and iconic fossil yet the function of this structure remain contested. The shell is divided into the phragmocone, comprised of a series of mostly gas filled chambers separated by septa, and the body chamber where the animal would have resided. Quantitative studies of the functional morphology of the shell have relied on geometric simplifications and mathematical models which limit accuracy and invite controversy. Past work has used simplified models which showed adult ammonites as negatively buoyant and were the basis for arguments of a benthic mode of life for adult ammonites. Many palaeobiologists however argue ammonites lived in the water column, if this is true then the shell must possess neutral/positive buoyancy to allow the animal to live in the water column without expending energy to stay afloat. Using exceptionally preserved hollow ammonite fossils and the shells of modern cephalopods: the external shell of Nautilus pompilius and the internal shell of Spirula spirula, we employ micro-CT, nano-CT and synchrotron x-ray tomography techniques to construct 3D models that are used to evaluate the buoyant properties of the cephalopod phragmocone. This method is applied to the Nautilus to evaluate the accuracy of the method and demonstrates the utility of CT data in volumetric analyses. The phragmocone of a hatchling Spirula seems to be capable of supporting the body in the water column with a single chamber, however difficulties in estimating the volume of the soft body create divergent developments of the buoyant properties through ontogeny. Further investigation of the hatchling ammonite Cadoceras show that it was capable of achieving neutral/positive buoyancy provided the phragmocone possess three or more chambers. Using this technique we are able to reconstruct the ability of the Nautilus and Spirula to maintain a position in the water column by exploiting the buoyancy of the phragmocone. This method has strong potential to address the controversial life-habits of adult ammonites through the study of the buoyant properties of the phragmocone and the structural properties of the shell. The implications for palaeobiology are clear, however the understanding of ammonite life-habits is also important for utilization as archives for palaeoenvironmetal/geochemical data.

α-Pinene secondary organic aerosol at low temperature: chemical composition and implications for particle viscosity

NASA Astrophysics Data System (ADS)

Huang, Wei; Saathoff, Harald; Pajunoja, Aki; Shen, Xiaoli; Naumann, Karl-Heinz; Wagner, Robert; Virtanen, Annele; Leisner, Thomas; Mohr, Claudia

2018-02-01

Chemical composition, size distributions, and degree of oligomerization of secondary organic aerosol (SOA) from α-pinene (C10H16) ozonolysis were investigated for low-temperature conditions (223 K). Two types of experiments were performed using two simulation chambers at the Karlsruhe Institute of Technology: the Aerosol Preparation and Characterization (APC) chamber, and the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) chamber. Experiment type 1 simulated SOA formation at upper tropospheric conditions: SOA was generated in the AIDA chamber directly at 223 K at 61 % relative humidity (RH; experiment termed cold humid, CH) and for comparison at 6 % RH (experiment termed cold dry, CD) conditions. Experiment type 2 simulated SOA uplifting: SOA was formed in the APC chamber at room temperature (296 K) and < 1 % RH (experiment termed warm dry, WD) or 21 % RH (experiment termed warm humid, WH) conditions, and then partially transferred to the AIDA chamber kept at 223 K, and 61 % RH (WDtoCH) or 30 % RH (WHtoCH), respectively. Precursor concentrations varied between 0.7 and 2.2 ppm α-pinene, and between 2.3 and 1.8 ppm ozone for type 1 and type 2 experiments, respectively. Among other instrumentation, a chemical ionization mass spectrometer (CIMS) coupled to a filter inlet for gases and aerosols (FIGAERO), deploying I- as reagent ion, was used for SOA chemical composition analysis. For type 1 experiments with lower α-pinene concentrations and cold SOA formation temperature (223 K), smaller particles of 100-300 nm vacuum aerodynamic diameter (dva) and higher mass fractions (> 40 %) of adducts (molecules with more than 10 carbon atoms) of α-pinene oxidation products were observed. For type 2 experiments with higher α-pinene concentrations and warm SOA formation temperature (296 K), larger particles ( ˜ 500 nm dva) with smaller mass fractions of adducts (< 35 %) were produced. We also observed differences (up to 20 °C) in maximum desorption temperature (Tmax) of individual compounds desorbing from the particles deposited on the FIGAERO Teflon filter for different experiments, indicating that Tmax is not purely a function of a compound's vapor pressure or volatility, but is also influenced by diffusion limitations within the particles (particle viscosity), interactions between particles deposited on the filter (particle matrix), and/or particle mass on the filter. Highest Tmax were observed for SOA under dry conditions and with higher adduct mass fraction; lowest Tmax were observed for SOA under humid conditions and with lower adduct mass fraction. The observations indicate that particle viscosity may be influenced by intra- and inter-molecular hydrogen bonding between oligomers, and particle water uptake, even under such low-temperature conditions. Our results suggest that particle physicochemical properties such as viscosity and oligomer content mutually influence each other, and that variation in Tmax of particle desorptions may have implications for particle viscosity and particle matrix effects. The differences in particle physicochemical properties observed between our different experiments demonstrate the importance of taking experimental conditions into consideration when interpreting data from laboratory studies or using them as input in climate models.

Explosive diversification following a benthic to pelagic shift in freshwater fishes

PubMed Central

2013-01-01

Background Interspecific divergence along a benthic to pelagic habitat axis is ubiquitous in freshwater fishes inhabiting lentic environments. In this study, we examined the influence of this habitat axis on the macroevolution of a diverse, lotic radiation using mtDNA and nDNA phylogenies for eastern North America’s most species-rich freshwater fish clade, the open posterior myodome (OPM) cyprinids. We used ancestral state reconstruction to identify the earliest benthic to pelagic transition in this group and generated fossil-calibrated estimates of when this shift occurred. This transition could have represented evolution into a novel adaptive zone, and therefore, we tested for a period of accelerated lineage accumulation after this historical habitat shift. Results Ancestral state reconstructions inferred a similar and concordant region of our mtDNA and nDNA based gene trees as representing the shift from benthic to pelagic habitats in the OPM clade. Two independent tests conducted on each gene tree suggested an increased diversification rate after this inferred habitat transition. Furthermore, lineage through time analyses indicated rapid early cladogenesis in the clade arising after the benthic to pelagic shift. Conclusions A burst of diversification followed the earliest benthic to pelagic transition during the radiation of OPM cyprinids in eastern North America. As such, the benthic/pelagic habitat axis has likely influenced the generation of biodiversity across disparate freshwater ecosystems. PMID:24341464

Assessing contamination in Great Lakes sediments using benthic invertebrate communities and the sediment quality triad approach

USGS Publications Warehouse

Canfield, Timothy J.; Dwyer, F. James; Fairchild, James F.; Haverland, Pamela S.; Ingersoll, Christopher G.; Kemble, Nile E.; Mount, David R.; La Point, Thomas W.; Burton, G. Allen; Swift, M. C.

1996-01-01

Sediments in many Great Lakes harbors and tributary rivers are contaminated. As part of the USEPA's Assessment and Remediation of Contaminated Sediment (ARCS) program, a number of studies were conducted to determine the nature and extent of sediment contamination in Great Lakes Areas of Concern (AOC). This paper describes the composition of benthic invertebrate communities in contaminated sediments and is one in a series of papers describing studies conducted to evaluate sediment toxicity from three AOC's (Buffalo River, NY; Indiana Harbor, IN; Saginaw River, MI), as part of the ARCS Program. Oligochaeta (worms) and Chironomidae (midge) comprised over 90% of the benthic invertebrate numbers in samples collected from depositional areas. Worms and midge consisted of taxa identified as primarily contaminant tolerant organisms. Structural deformities of mouthparts in midge larvae were pronounced in many of the samples. Good concurrence was evident between measures of laboratory toxicity, sediment contaminant concentration, and benthic invertebrate community composition in extremely contaminated samples. However, in moderately contaminated samples, less concordance was observed between the benthos community composition and either laboratory toxicity test results or sediment contaminant concentration. Laboratory sediment toxicity tests may better identify chemical contamination in sediments than many commonly used measures of benthic invertebrate community composition. Benthic measures may also reflect other factors such as habitat alteration. Evaluation of non-contaminant factors are needed to better interpret the response of benthic invertebrates to sediment contamination.

Benthic contributions to Adriatic and Mediterranean biogeochemical cycles

NASA Astrophysics Data System (ADS)

Capet, Arthur; Lazzari, Paolo; Spagnoli, Federico; Bolzon, Giorgio; Solidoro, Cosimo

2017-04-01

The 3D biogeochemical BFM-OGSTM implementation currently exploited operationally in the Copernicus Marine Environment Monitoring Services Mediterranean Sea Monitoring and Forecasting Centre (CMEMS-Med-MFC; Lazzari et al., 2010) has been complemented with a benthic component. The approach followed that of (Capet et al 2016) and involved a vertically integrated benthic module accounting for the effect of environmental bottom conditions on diagenetic rates (aerobic mineralization, denitrification, nitrification) through transfer functions as well as the effect of waves and bottom currents on sediment deposition and resuspension. A balanced climatological year is simulated for various values of the resuspension parameters, using specifically calibrated transfer functions for the Adriatic Sea and generic formulations for the rest of the Mediterranean basin. The results serves the mapping of distinct provinces of the Adriatic Sea based on the benthic contributions biogeochemical budgets and the seasonal variability of benthic-pelagic fluxes. The differences with the non-benthic reference simulation are highlighted in details regarding the Adriatic, and more generally for the entire Mediterranean Sea. Lazzari, P., Teruzzi, A., Salon, S., Campagna, S., Calonaci, C., Colella, S., Tonani, M., Crise, A. (2010). Pre-operational short-term forecasts for Mediterranean Sea biogeochemistry. Ocean Science, 6(1), 25-39. Capet, A., Meysman, F. J., Akoumianaki, I., Soetaert, K., & Grégoire, M. (2016). Integrating sediment biogeochemistry into 3D oceanic models: A study of benthic-pelagic coupling in the Black Sea. Ocean Modelling, 101, 83-100.

Global occurrence of pyrethroid insecticides in sediment and the associated toxicological effects on benthic invertebrates: An overview.

PubMed

Li, Huizhen; Cheng, Fei; Wei, Yanli; Lydy, Michael J; You, Jing

2017-02-15

Pyrethroids are the third most applied group of insecticides worldwide and are extensively used in agricultural and non-agricultural applications. Pyrethroids exhibit low toxicity to mammals, but have extremely high toxicity to fish and non-target invertebrates. Their high hydrophobicity, along with pseudo-persistence due to continuous input, indicates that pyrethroids will accumulate in sediment, pose long-term exposure concerns to benthic invertebrates and ultimately cause significant risk to benthic communities and aquatic ecosystems. The current review synthesizes the reported sediment concentrations of pyrethroids and associated toxicity to benthic invertebrates on a global scale. Geographically, the most studied area was North America, followed by Asia, Europe, Australia and Africa. Pyrethroids were frequently detected in both agricultural and urban sediments, and bifenthrin and cypermethrin were identified as the main contributors to toxicity in benthic invertebrates. Simulated hazard quotients (HQ) for sediment-associated pyrethroids to benthic organisms ranged from 10.5±31.1 (bifenthrin) to 41.7±204 (cypermethrin), suggesting significant risk. The current study has provided evidence that pyrethroids are not only commonly detected in the aquatic environment, but also can cause toxic effects to benthic invertebrates, and calls for better development of accurate sediment quality criteria and effective ecological risk assessment methods for this emerging class of insecticides. Copyright © 2016 Elsevier B.V. All rights reserved.

Use of a Novel Sediment Exposure to Determine the Effects of ...

EPA Pesticide Factsheets

Triclosan (5-chloro-2-(2,4-dichlorophenoxy) phenol) is a relatively new, commonly used antimicrobial compound found in many personal care products. Triclosan is toxic to marine organisms at the ug/l level, can photo-degrade to a dioxin, accumulate in humans, and has been found to be stable in marine sediments for over 30 years. To determine the effects of triclosan on marine benthic communities, we brought intact sediment cores into the laboratory and held them under flowing seawater conditions. A two cm layer of triclosan-spiked sediment was applied to the surface, and after a two-week exposure the meio- and macrofaunal communities were assessed for differences in composition relative to non-spiked core. The High Triclosan treatment (180 mg/kg dry weight) affected both the meio- and macro benthic communities. There were no discernable differences in the Low Triclosan treatment (14 mg/kg dry weight dry). This exposure method is effective for testing benthic community response to sediment contaminants, but improvements should be made as to the amount and method of applying the overlying sediment to prevent smothering of fragile benthic organisms. This paper describes the effects of triclosan on meio- and macro-benthic marine communities. It describes a novel system of whole benthic community exposure that is a promising method to evaluate effects on intact marine benthic communities. Triclosan concentrations greater than 180 mg/kg dry weight had a signif

Associations between degraded benthic communities and contaminated sediments: Sabine Lake, Lake Pontchartrain, and Choctawhatchee Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Engle, V.D.; Summers, J.K.; Macauley, J.M.

1994-12-31

The Environmental Monitoring and Assessment Program for Estuaries (EMAP-E) in the Gulf of Mexico supplements its base sampling effort each year with localized, intensive spatial sampling in selected large estuarine systems. By selecting random locations within 70 km{sup 2} hexagonal areas, individual estuaries were sampled using EMAP methods but at four times the density as base sampling. In 1992, 19 sites were sampled in Lake Pontchartrain, Louisiana. In 1 993, 18 sites were sampled in Sabine Lake, Texas and 12 sites were sampled in Choctawhatchee Bay, Florida. At all sites, sediment grabs were taken and analyzed for benthic species compositionmore » and abundance, for toxicity to Ampelisca, and for organic and inorganic sediment contaminants. An indicator of biotic integrity, the benthic index, was calculated to represent the status of benthic communities. A series of statistical techniques, such as stepwise regression analysis, were employed to determine whether the variation in the benthic index could be associated with variation in sediment contaminants, sediment toxicity, or levels of dissolved oxygen. Spatial distributions of these parameters were examined to determine the geographical co-occurrence of degraded benthic communities and environmental stressors. In Lake Pontchartrain, for example, 85% of the variation in the benthic index was associated with decreased levels of dissolved oxygen, and increased concentrations of PCBs, alkanes, copper, tin, and zinc in the sediments.« less

Influence of large woody debris on stream insect communities and benthic detritus

Treesearch

A. Dennis Lemly; Robert H. Hilderbrand

2000-01-01

We examined the extent to which benthic detritus loadings and the functional feeding group structure of stream insect communities respond to channel modifications produced by experimental addition of large woody debris (LWD, entire logs) to Stony Creek, VA. Benthic detritus loadings per sample did not change after LWD additions, but large increases in pool habitats...

Three dimensional CFD modeling and experimental validation of a single chamber solid oxide fuel cell fed by methane

NASA Astrophysics Data System (ADS)

Nguyen, H. T.; Le, M. V.; Nguyen, T. A.; Nguyen, T. A. N.

2017-06-01

The solid oxide fuel cell is one of the promising technologies for future energy demand. Solid oxide fuel cell operated in the single-chamber mode exhibits several advantages over conventional single oxide fuel cell due to the simplified, compact, sealing-free cell structure. There are some studies on simulating the behavior of this type of fuel cell but they mainly focus on the 2D model. In the present study, a three-dimensional numerical model of a single chamber solid oxide fuel cell (SOFC) is reported and solved using COMSOL Multiphysics software. Experiments of a planar button solid oxide fuel cell were used to verify the simulation results. The system is fed by methane and oxygen and operated at 700°C. The cathode is LSCF6482, the anode is GDC-Ni, the electrolyte is LDM and the operating pressure is 1 atm. There was a good agreement between the cell temperature and current voltage estimated from the model and measured from the experiment. The results indicate that the model is applicable for the single chamber solid oxide fuel cell and it can provide a basic for the design, scale up of single chamber solid oxide fuel cell system.

Comparison of a diurnal vs steady-state ozone exposure profile on growth and yield of oilseed rape (Brassica napus L.) in open-top chambers in the Yangtze Delta, China.

PubMed

Wang, Xiaoke; Zheng, Qiwei; Feng, Zhaozhong; Xie, Juqing; Feng, Zongwei; Ouyang, Zhiyun; Manning, William J

2008-11-01

Most available exposure-response relationships for assessing crop loss due to elevated ozone (O(3)) have been established using data from chamber and open-top chamber experiments, using a simulated constant O(3) concentration exposure (square wave), which is not consistent with the diurnal variation of O(3) concentration that occurs in nature. We investigated the response of oilseed rape (Brassica napus L.) to O(3) as affected by two exposure regimes: one with a diurnal variation (CF100D) and another with a constant concentration (CF100). Although the two exposure regimes have the same mean O(3) concentration and accumulated O(3) concentration above 40 ppb (AOT40), our results show that O(3) at CF100D reduced biomass and number of pods/plant more than O(3) at CF100. Both O(3) exposures resulted in larger seed weights/100 pods compared to CF. Numbers of seeds/100 pods were reduced by CF100, while numbers of seeds/100 pods in the CF100D chambers were comparable to those in CF. Our results suggest that chamber experiments that use a constant O(3) exposure may underestimate O(3) effects on biomass and yields.

A Smart Cage With Uniform Wireless Power Distribution in 3D for Enabling Long-Term Experiments With Freely Moving Animals.

PubMed

Mirbozorgi, S Abdollah; Bahrami, Hadi; Sawan, Mohamad; Gosselin, Benoit

2016-04-01

This paper presents a novel experimental chamber with uniform wireless power distribution in 3D for enabling long-term biomedical experiments with small freely moving animal subjects. The implemented power transmission chamber prototype is based on arrays of parallel resonators and multicoil inductive links, to form a novel and highly efficient wireless power transmission system. The power transmitter unit includes several identical resonators enclosed in a scalable array of overlapping square coils which are connected in parallel to provide uniform power distribution along x and y. Moreover, the proposed chamber uses two arrays of primary resonators, facing each other, and connected in parallel to achieve uniform power distribution along the z axis. Each surface includes 9 overlapped coils connected in parallel and implemented into two layers of FR4 printed circuit board. The chamber features a natural power localization mechanism, which simplifies its implementation and ease its operation by avoiding the need for active detection and control mechanisms. A single power surface based on the proposed approach can provide a power transfer efficiency (PTE) of 69% and a power delivered to the load (PDL) of 120 mW, for a separation distance of 4 cm, whereas the complete chamber prototype provides a uniform PTE of 59% and a PDL of 100 mW in 3D, everywhere inside the chamber with a size of 27×27×16 cm(3).

Assesment of PM2.5 emission from corn stover burning determining in chamber combustion

NASA Astrophysics Data System (ADS)

Hafidawati; Lestari, P.; Sofyan, A.

2018-04-01

Chamber measurement were conducted to determine Particulate Matter (PM2.5) emission from open burning of corn straw at Garut District, West Java. The of this study is to estimate the concentration of PM2.5 for two types of corn (corncobs and cornstover) for five varieties (Bisma, P29, NK, Bisma, NW). Corn residues were collected and then burned in the chamber combustion. The chamber was designed to simulate the burning in the field, which was observed in the field experiment that meteorological condition was calm wind. The samples were collected using a minivol air sampler. The assessment results of PM2.5 concentrations (mg/m3) from open burning experiment in the chamber for five varieties of corn cobs (Bisma, P29, NK, Bisi, NW) was 9.187; 2.843; 7.409; 3.781; 1.895 respectively. Concentration for corn stover burn was 2.060; 5.283; 4.048; 5.306 and 5.697 respectively. Fluctuations in the value of concentration among these varieties reflect variations in combustion conditions (combustion efficiency) and other parameters including water content, biomass conditions and the meteorological conditions. The combustion efficiency (MCE) of the combustion chamber simulation of corncobs ia lower than the MCE of corn stover, that the concentration PM2.5 more emitted from the burning of corn stover. The results of this study presented provide useful information for the development of local emission factors for PM2.5 from open burning of corn stover in Indonesia.