Qualitative assessment of climate-driven ecological shifts in the Caspian Sea

PubMed Central

Beyraghdar Kashkooli, Omid; Gröger, Joachim; Núñez-Riboni, Ismael

2017-01-01

The worldwide occurrence of complex climate-induced ecological shifts in marine systems is one of the major challenges in sustainable bio-resources management. The occurrence of ecological environment-driven shifts was studied in the Southern Caspian Sea using the “shiftogram” method on available fisheries-related (i.e. commercially important bentho-pelagic fish stocks) ecological and climatic variables. As indicators of potential environmentally driven shift patterns we used indices for the North Atlantic Oscillation, the Southern Oscillation, the Siberian High, the East Atlantic-West Russia pattern, as well as Sea Surface Temperature and surface chlorophyll-a concentration. Given the explorative findings from the serial shift analyses, the cascading and serial order of multiple shift events in climatic-ecologic conditions of the southern Caspian Sea suggested a linkage between external forces and dynamics of ecosystem components and structures in the following order: global-scale climate forces lead to local environmental processes, which in turn lead to biological components dynamics. For the first time, this study indicates that ecological shifts are an integral component of bentho-pelagic subsystem regulatory processes and dynamics. Qualitative correspondence of biological responses of bentho-pelagic stocks to climatic events is one of the supporting evidences that overall Caspian ecosystem structures and functioning might have–at least partially–been impacted by global-scale climatic or local environmental shifts. These findings may help to foster a regional Ecosystem-based Approach to Management (EAM) as an integral part of bentho-pelagic fisheries management plans. PMID:28475609

Genetic Population Structure in the Antarctic Benthos: Insights from the Widespread Amphipod, Orchomenella franklini

PubMed Central

Baird, Helena Phoenix; Miller, Karen Joy; Stark, Jonathan Sean

2012-01-01

Currently there is very limited understanding of genetic population structure in the Antarctic benthos. We conducted one of the first studies of microsatellite variation in an Antarctic benthic invertebrate, using the ubiquitous amphipod Orchomenella franklini (Walker, 1903). Seven microsatellite loci were used to assess genetic structure on three spatial scales: sites (100 s of metres), locations (1–10 kilometres) and regions (1000 s of kilometres) sampled in East Antarctica at Casey and Davis stations. Considerable genetic diversity was revealed, which varied between the two regions and also between polluted and unpolluted sites. Genetic differentiation among all populations was highly significant (F ST = 0.086, R ST = 0.139, p<0.001) consistent with the brooding mode of development in O. franklini. Hierarchical AMOVA revealed that the majority of the genetic subdivision occurred across the largest geographical scale, with Nem≈1 suggesting insufficient gene flow to prevent independent evolution of the two regions, i.e., Casey and Davis are effectively isolated. Isolation by distance was detected at smaller scales and indicates that gene flow in O. franklini occurs primarily through stepping-stone dispersal. Three of the microsatellite loci showed signs of selection, providing evidence that localised adaptation may occur within the Antarctic benthos. These results provide insights into processes of speciation in Antarctic brooders, and will help inform the design of spatial management initiatives recently endorsed for the Antarctic benthos. PMID:22479613

Continental diatom biodiversity in stream benthos declines as more nutrients become limiting

PubMed Central

Passy, Sophia I.

2008-01-01

Biodiversity of both terrestrial ecosystems and lacustrine phytoplankton increases with niche dimensionality, which can be determined by the number of limiting resources (NLR) in the environment. In the present continental study, I tested whether niche dimensionality and, with this species, richness scale positively with NLR in running waters. Diatom richness in 2,426 benthic and 383 planktonic communities from 760 and 127 distinct localities, respectively, was examined as a function of NLR, including basic cations, silica, iron, ammonia, nitrate, and dissolved phosphorus. The patterns found in the two communities were opposite: as more resources became limiting, diatom richness declined in the benthos but increased in the phytoplankton. The divergence of benthic from both planktonic and terrestrial communities is attributed to the complex spatial organization of the benthos, generating strong internal resource gradients. Differential stress tolerance among benthic diatoms allows substantial overgrowth, which greatly reduces nutrient transport to the biofilm base and can be supported only by high ambient resource levels. Therefore, niche dimensionality in the benthos increases with the number of resources at high supply. These findings provide a mechanistic explanation of the well documented phenomenon of increased species richness after fertilization in freshwater as opposed to terrestrial ecosystems. Clearly, however, new theoretical approaches, retaining resource availability as an environmental constraint but incorporating a trade-off between tolerance and spatial positioning, are necessary to address coexistence in one of the major producer communities in streams, the algae. PMID:18599459

Benthos and plankton community data for selected rivers and harbors along the western Lake Michigan shoreline, 2014

USGS Publications Warehouse

Scudder Eikenberry, Barbara C.; Burns, Daniel J.; Olds, Hayley T.; Bell, Amanda H.; Mapel, Kassidy T.

2016-06-15

Benthos (benthic invertebrates) and plankton (zooplankton and phytoplankton) communities were sampled in 2014 at 10 Wisconsin rivers and harbors, including 4 sites in Great Lakes Areas of Concern and 6 less degraded comparison sites with similar physical and chemical characteristics, including climate, latitude, geology, and land use. Previous U.S. Geological Survey sampling was completed in 2012, but because of ongoing sediment remediation at three of the Areas of Concern (AOCs) and unusually hot and dry conditions in many areas during 2012, additional sampling was added in 2014. Comparable sampling methods were used in 2012 and 2014. Benthos were collected by using Hester-Dendy artificial substrate samplers and composite Ponar grab samples of bottom sediment; zooplankton were collected by using tows from depth to the surface with a 63-micrometer mesh plankton net; phytoplankton were collected by using whole water samples composited from set depth intervals. This report describes the study areas and field sampling methods for 2014, and it presents data on taxonomic identification and abundance of benthos and plankton that can serve as a basis for evaluation of related Beneficial Use Impairments (BUIs) at the AOCs. Physical and chemical data were sampled concurrently (specific conductance, temperature, pH, dissolved oxygen, chlorophyll a, total and volatile suspended solids in water samples; particle size and volatile-on-ignition of sediment in benthic grab samples). The results of field quality assurance-quality control are also presented.

Comparison of benthos and plankton for selected areas of concern and non-areas of concern in western Lake Michigan Rivers and Harbors in 2012

USGS Publications Warehouse

Eikenberry, Barbara C. Scudder; Bell, Amanda H.; Olds, Hayley T.; Burns, Daniel J.

2016-07-25

Recent data are lacking to assess whether impairments still exist at four of Wisconsin’s largest Lake Michigan harbors that were designated as Areas of Concern (AOCs) in the late 1980s due to sediment contamination and multiple Beneficial Use Impairments (BUIs), such as those affecting benthos (macroinvertebrates) and plankton (zooplankton and phytoplankton) communities. During three seasonal sampling events (“seasons”) in May through August 2012, the U.S. Geological Survey collected sediment benthos and water plankton at the four AOCs as well as six less-degraded non-AOCs along the western Lake Michigan shoreline to assess whether AOC communities were degraded in comparison to non-AOC communities. The four AOCs are the Lower Menominee River, the Lower Green Bay and Fox River, the Sheboygan River, and the Milwaukee Estuary. Due to their size and complexity, multiple locations or “subsites” were sampled within the Lower Green Bay and Fox River AOC (Lower Green Bay, the Fox River near Allouez, and the Fox River near De Pere) and within the Milwaukee Estuary AOC (the Milwaukee River, the Menomonee River, and the Milwaukee Harbor) and single locations were sampled at the other AOCs and non-AOCs. The six non-AOCs are the Escanaba River in Michigan, and the Oconto River, Ahnapee River, Kewaunee River, Manitowoc River, and Root River in Wisconsin. Benthos samples were collected by using Hester-Dendy artificial substrates deployed for 30 days and by using a dredge sampler; zooplankton were collected by net and phytoplankton by whole-water sampler. Except for the Lower Green Bay and Milwaukee Harbor locations, communities at each AOC were compared to all non-AOCs as a group and to paired non-AOCs using taxa relative abundances and metrics, including richness, diversity, and an Index of Biotic Integrity (IBI, for Hester-Dendy samples only). Benthos samples collected during one or more seasons were rated as degraded for at least one metric at all AOCs. In the Milwaukee Estuary, benthos richness was lower in the Milwaukee River subsite spring and summer samples and in the Menomonee River subsite spring sample relative to the paired non-AOCs. Benthos diversity and IBIs at the Menomonee River subsite and IBIs at the Milwaukee River subsite and Sheboygan River were significantly lower than at all non-AOCs as a group across all seasons and therefore were rated as degraded. In addition, IBIs at the Lower Menominee River were significantly lower than those at the paired non-AOCs during all seasons and were therefore rated degraded. Benthos at both Fox River subsites and the Milwaukee River subsite were significantly different from their paired non-AOCs during all three seasons, based on a comparison of the relative abundances of taxa using multivariate testing. Metrics for plankton at AOCs were not significantly lower than those at the paired or group non-AOCs during all seasons; however, zooplankton richness in spring at the Sheboygan River and in fall at the Menomonee River subsite was rated as degraded in comparison to paired non-AOCs. Also, zooplankton richness in fall at the Fox River near Allouez subsite and in spring at the Milwaukee River subsite was rated degraded overall because values were lower than at all non-AOCs as a group and lower than at the paired non-AOCs. Zooplankton diversity in fall at the Fox River near Allouez subsite and the Lower Menominee River was rated degraded in comparison to paired non-AOC comparison sites. Zooplankton communities at the Fox River near Allouez subsite were significantly different from the paired non-AOCs when multivariate comparisons were made without rotifers other than A. priodonta. Overall, benthos and zooplankton BUIs remained at the AOCs in 2012 but no AOCs with a phytoplankton BUI were rated degraded in comparison to non-AOCs. The use of a multiple ecological measures, structural and functional, and multiple statistical analyses, biological metrics and multivariate statistics, provided assessments that defined 2012 status of communities relative to less-impaired non-AOCs in the Great Lakes area.

Comparison of remote video and diver's direct observations to quantify reef fishes feeding on benthos in coral and rocky reefs.

PubMed

Longo, G O; Floeter, S R

2012-10-01

This study compared remote underwater video and traditional direct diver observations to assess reef fish feeding impact on benthos across multiple functional groups within different trophic categories (e.g. herbivores, zoobenthivores and omnivores) and in two distinct reef systems: a subtropical rocky reef and a tropical coral reef. The two techniques were roughly equivalent, both detecting the species with higher feeding impact and recording similar bite rates, suggesting that reef fish feeding behaviour at the study areas are not strongly affected by the diver's presence. © 2012 The Authors. Journal of Fish Biology © 2012 The Fisheries Society of the British Isles.

Interdecadal change in the deep Puget sound benthos

USGS Publications Warehouse

Nichols, F.H.

2003-01-01

Data from quantitative samples of the benthos at a 200-m site in central Puget Sound, collected twice yearly in most years between 1963 and 1992, were evaluated to determine the extent to which species composition in a continental-shelf depth community exhibits long-term persistence. Study results showed that the most abundant species were consistently present over the 30-year period. However, measures of species composition (e.g., similarity, diversity) reveal a subtle, gradual change in the community over time. Among the changes are (1) multi-year periods of greatly increased abundance of the common species; (2) an overall increase in the total abundance of the benthic community beginning in the mid-1970s; (3) periods of increased abundance, during the late 1970s and early 1980s, of two species that are tolerant of organic enrichment; and (4) the steady decline in abundance of the large burrowing echinoderm, Brisaster latifrons as a consequence of the lack of recruitment to the site since 1970. Despite the conspicuousness of these changes, there are no observed environmental factors that readily explain them. Circumstantial evidence suggests that climate-related change in Puget Sound circulation beginning in the mid-1970s, organic enrichment associated with a nearby large source of primary-treated sewage, and the influence of changes in the abundance of the large echinoderms on the smaller species are potential agents of change. The principle reasons for our inability to identify causes of long-term change in the Puget Sound benthos are (a) inconsistent long-term monitoring of environmental variables, (b) the lack of quantitative information about long-term changes in plankton and fish populations, (c) lack of knowledge of specific predator/prey and competitive interactions in soft bottom benthos, (d) unknown influence of moderate levels of contamination on biota; and (e) lack of understanding of possible linkages between climate regime shifts and fluctuations in local biological populations.

Comparison of benthos and plankton for Waukegan Harbor Area of Concern, Illinois, and Burns Harbor-Port of Indiana non-Area of Concern, Indiana, in 2015

USGS Publications Warehouse

Eikenberry, Barbara C. Scudder; Olds, Hayley T.; Burns, Daniel J.; Dobrowolski, Edward G.; Schmude, Kurt L.

2017-06-06

During two seasonal sampling events in spring (June) and fall (August) of 2015, the U.S. Geological Survey collected benthos (benthic invertebrates) and plankton (zooplankton and phytoplankton) at three sites each in the Waukegan Harbor Area of Concern (AOC) in Illinois and in Burns Harbor-Port of Indiana, a non-AOC comparison site in Indiana. The study was done in cooperation with the U.S. Environmental Protection Agency and the Illinois Department of Natural Resources. Samples were collected concurrently for physical and chemical parameters (specific conductance, temperature, pH, dissolved oxygen, chlorophyll-a, total and volatile suspended solids in water samples; particle size and volatile-on-ignition solids of sediment in dredge samples). The purpose of the study was to assess whether or not aquatic communities at the AOC were degraded in comparison to communities at the non-AOC, which was presumed to be less impaired than the AOC. Benthos were collected by using Hester-Dendy artificial substrate samplers and a Ponar® dredge sampler to collect composited grabs of bottom sediment; zooplankton were collected by using tows from depth to the surface with a 63-micrometer mesh plankton net; phytoplankton were collected by using whole water samples composited from set depth intervals. Aquatic communities at the AOC and the non-AOC were compared by use of univariate statistical analyses with metrics such as taxa richness (number of unique taxa), diversity, and a multimetric Index of Biotic Integrity (IBI, for artificial-substrate samples only) as well as by use of multivariate statistical analyses of taxa relative abundances.Although benthos communities at Waukegan Harbor AOC were not rated as degraded in comparison to the non-AOC, metrics for zooplankton and phytoplankton communities did show some impairment for the 2015 sampling. Across seasons, benthos richness and diversity were significantly higher and rated as less degraded at the AOC compared to the non-AOC; however, benthos IBIs were not significantly different. Multivariate comparisons revealed that the benthos communities in the AOC and non-AOC were significantly different, but these comparisons do not address current degradation in either harbor. The dominant taxa in dredge samples were oligochaete worms in both harbors, but there were differences in the relative abundances of Dreissena as well as oligochaete and midge taxa. Although zooplankton richness and diversity in the AOC were lower and rated as more degraded in spring, these metrics were rated as less degraded in fall compared to the non-AOC, effectively balancing out so that there was no difference across seasons. Multivariate comparisons also indicated that zooplankton communities in the AOC were significantly different from those in the non-AOC for spring only but not across seasons, possibly because of lower water temperatures in spring at Waukegan Harbor than at the non-AOC site. The spring zooplankton community in Waukegan Harbor was dominated in density and biomass by the rotifer Synchaeta. Across seasons, diatom richness was significantly higher and rated as less degraded in the AOC than the non-AOC because of spring values, whereas soft algae richness was significantly lower and rated as more degraded in the AOC because of fall values. Spring richness of combined phytoplankton (soft algae and diatoms) was significantly higher in the AOC than in the non-AOC. Neither diatom diversity nor soft algae diversity differed significantly between the harbors, but combined phytoplankton diversity across seasons, if replicates were included, was significantly lower and rated as more degraded in the AOC than in the non-AOC. Multivariate tests indicated that the combined phytoplankton communities in the harbors were not significantly different across seasons. Significant differences were not found between harbors for chlorophyll-a, suspended solids, algal densities, or biomass.

Evaluation of brine disposal from the Bryan Mound site of the Strategic Petroleum Reserve Program. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hann, R.W. Jr.; Randall, R.E.

1980-12-01

The purpose of this report is to describe the environmental conditions found by the principal investigators during the predisposal study conducted from September 1977 through February 1980 prior to the start of brine discharge in March 1980. The major areas of investigation are physical oceanography, analysis of the discharge plume, water and sediment quality, nekton, benthos, phytoplankton, zooplankton, and data management. Volume 1 describes the results of the predisposal study, and it is divided into eight chapters entitled: Physical Oceanography, Analsyis of the Discharge Plume, Water and Sediment Quality, Nekton, Benthos, Zooplankton, Phytoplankton, and Data Management. Volume 2 consists ofmore » appendices which contain additional supporting data in the form of figures and tables.« less

Evaluation of brine disposal from the Bryan Mound site of the Strategic Petroleum Reserve Program. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hann, R.W. Jr.; Randall, R.E.

1980-12-01

The purpose of this report is to describe the environmental conditions found by the principal investigators during the predisposal study conducted from September 1977 through February 1980 prior to the start of brine discharge in March 1980. The major areas of investigation are physical oceanography, analysis of the discharge plume, water and sediment quality, nekton, benthos, phytoplankton, zooplankton, and data management. Volume 1 describes the results of the predisposal study, and it is divided into eight chapters entitled: Physical Oceanography, Analysis of the Discharge Plume, Water and Sediment Quality, Nekton, Benthos, Zooplankton, Phytoplankton, and Data Management. Volume 2 consists ofmore » appendices which contain additional supporting data in the form of figures and tables.« less

Elucidating the Behavior of Cyclic Volatile Methylsiloxanes in a Subarctic Freshwater Food Web: A Modeled and Measured Approach.

PubMed

Krogseth, Ingjerd S; Undeman, Emma; Evenset, Anita; Christensen, Guttorm N; Whelan, Mick J; Breivik, Knut; Warner, Nicholas A

2017-11-07

Cyclic volatile methylsiloxanes (cVMS) are used in personal care products and emitted to aquatic environments through wastewater effluents, and their bioaccumulation potential is debated. Here, a new bentho-pelagic version of the ACC-HUMAN model was evaluated for polychlorinated biphenyls (PCBs) and applied to cVMS in combination with measurements to explore their bioaccumulation behavior in a subarctic lake. Predictions agreed better with measured PCB concentrations in Arctic char (Salvelinus alpinus) and brown trout (Salmo trutta) when the benthic link was included than in the pelagic-only model. Measured concentrations of decamethylcyclopentasiloxane (D5) were 60 ± 1.2 (Chironomidae larvae), 107 ± 4.5 (pea clams Pisidium sp.), 131 ± 105 (three-spined sticklebacks: Gasterosteus aculeatus), 41 ± 38 (char), and 9.9 ± 5.9 (trout) ng g -1 wet weight. Concentrations were lower for octamethylcyclotetrasiloxane (D4) and dodecamethylcyclohexasiloxane (D6), and none of the cVMS displayed trophic magnification. Predicted cVMS concentrations were lower than measured in benthos, but agreed well with measurements in fish. cVMS removal through ventilation was an important predicted loss mechanism for the benthic-feeding fish. Predictions were highly sensitive to the partition coefficient between organic carbon and water (K OC ) and its temperature dependence, as this controlled bioavailability for benthos (the main source of cVMS for fish).

Evolution of long-toothed fishes and the changing nature of fish-benthos interactions on coral reefs.

PubMed

Bellwood, David R; Hoey, Andrew S; Bellwood, Orpha; Goatley, Christopher H R

2014-01-01

Interactions between fishes and the benthos have shaped the development of marine ecosystems since at least the early Mesozoic. Here, using the morphology of fish teeth as an indicator of feeding abilities, we quantify changes over the last 240 million years of reef fish evolution. Fossil and extant coral reef fish assemblages reveal exceptional stasis in tooth design over time, with one notable exception, a distinct long-toothed form. Arising only in the last 40 million years, these long-toothed fishes have bypassed the invertebrate link in the food chain, feeding directly on benthic particulate material. With the appearance of elongated teeth, these specialized detritivores have moved from eating invertebrates to eating the food of invertebrates. Over evolutionary time, fishes have slid back down the food chain.

BI-NATIONAL LOWER FOOD WEB ASSESSMENT: 2005 BENTHOS RESULTS

EPA Science Inventory

Findings have been generated as part of a bi-national coordinated partnership for lakewide sampling to support needs expressed by the Great Lakes Fisheries Committee, the Lake Superior Technical Committee, and the Lake Superior LaMP.

The ecology of the soft-bottom benthos of San Francisco Bay: a community profile

USGS Publications Warehouse

Nichols, Frederic H.; Pamatmat, Mario M.

1988-01-01

The profile provides a reference to the scientific information concerning the animals and plants of the bay's benthic communities, their importance to the bay ecosystem, and their value as a resource measured in human terms. Because there have been few process-oriented studies of the benthos of San Francisco Bay (e.g., field and laboratory rate-measurement experiments), the material presented herein is largely descriptive. Nonetheless, we have described the processes that interconnect the various physical, chemical, and biological components of the benthic environment, and the important couplings between this environment and the water column above, with reference to research results from other estuaries where necessary. We consider the role of the benthic community as a food source for fish, aquatic birds, and humans; as a consumer or degrader of organic materials including wastes; as a recycler of minerals and nutrients; and as an accumulator of pollutants.

Seasonal and Spatial Variations of Macro Benthos in the Intertidal Mudflat of Southern Yellow River Delta, China in 2007/2008

NASA Astrophysics Data System (ADS)

Zou, Li; Yao, Xiao; Yamaguchi, Hitomi; Guo, Xinyu; Gao, Huiwang; Wang, Kai; Sun, Mingyi

2018-04-01

In order to examine the seasonal and spatial distributions of benthic animals in the intertidal mudflat of the southern Yellow River Delta, field investigations were carried out in 2007 and 2008 and multiple methods were applied. Results showed that, the biomass of macro benthos ranged at 0.75-1151.00 g wet m-2 and averaged at 156.31 g wet m-2, in which Mactra veneriformis accounted for 75.6%-93.4% of the total macro benthic biomass. More than 90% of macro benthos inhabited in the middle and low tide lines, and higher biomass occurred in early summer and lower in winter. Statistical analysis showed that: 1) M. veneriformis growth was primarily favored at higher temperature and lower salinity; 2) after long time interaction, benthic bivalve grazers led to patching distributions of Chlorophyll a (Chl a); 3) macro benthic biomass positively related with Chl a when the concentration of Chl a was low, but they were negatively related when Chl a concentration was high; and 4) furthermore, the biomass of benthic bivalves peaked in the sediment with median grain size about 0.55 mm, but decreased gradually in coarse or fine sediments. The secondary productivity ranged at 0.37-283.68 g m-2yr-1 and averaged at 47.88 g m-2 yr-1, in which 69.7% was contributed by M. veneriformis It was estimated that primary production was transformed to secondary production at a rate of 6.87% approximately, which implies that there is a local sustainability of high bivalve production.

The Influence of the Disturbed Continuity of the River and the Invasive Species--Potamopyrgus antipodarum (Gray, 1843), Gammarus tigrinus (Sexton, 1939) on Benthos Fauna: A Case Study on Urban Area in the River Ruda (Poland).

PubMed

Spyra, Aneta; Kubicka, Justyna; Strzelec, Małgorzata

2015-07-01

The progressive degradation of aquatic ecosystems and ecohydrological role of rivers is one of the most important global environmental issues. The loss of the ability of rivers to self-purify waters due to the disturbances of river continuity cause a lack of biological life in parts of rivers or even in an entire river. The appearance of alien species in degraded aquatic environments is an increasingly common phenomenon and constitutes one of the threats to biodiversity. The aim of the study was to evaluate the possible impact of alien species Potamopyrgus antipodarum (Gray, 1843) and Gammarus tigrinus (Sexton, 1939) on native invertebrates as well as the influence of environmental factors on the occurrence benthos fauna including also alien species. The study conducted in industrial area, in the River Ruda (Poland), showed that at the sites at which the occurrence of the two alien species was observed, the density of native benthos and diversity decreased significantly. CCA analysis showed that non-native species occurred in fast water velocity and that their presence was associated with high values of conductivity, hardness, and a high chloride content. The arrival of new species from other geographical areas is one of the factors that influences the species balance in native aquatic fauna. The number of alien species in freshwater ecosystems probably will increase in the future as new aliens are moved outside of their native ranges.

The Influence of the Disturbed Continuity of the River and the Invasive Species— Potamopyrgus antipodarum (Gray, 1843), Gammarus tigrinus (Sexton, 1939) on Benthos Fauna: A Case Study on Urban Area in the River Ruda (Poland)

NASA Astrophysics Data System (ADS)

Spyra, Aneta; Kubicka, Justyna; Strzelec, Małgorzata

2015-07-01

The progressive degradation of aquatic ecosystems and ecohydrological role of rivers is one of the most important global environmental issues. The loss of the ability of rivers to self-purify waters due to the disturbances of river continuity cause a lack of biological life in parts of rivers or even in an entire river. The appearance of alien species in degraded aquatic environments is an increasingly common phenomenon and constitutes one of the threats to biodiversity. The aim of the study was to evaluate the possible impact of alien species Potamopyrgus antipodarum (Gray, 1843) and Gammarus tigrinus (Sexton, 1939) on native invertebrates as well as the influence of environmental factors on the occurrence benthos fauna including also alien species. The study conducted in industrial area, in the River Ruda (Poland), showed that at the sites at which the occurrence of the two alien species was observed, the density of native benthos and diversity decreased significantly. CCA analysis showed that non-native species occurred in fast water velocity and that their presence was associated with high values of conductivity, hardness, and a high chloride content. The arrival of new species from other geographical areas is one of the factors that influences the species balance in native aquatic fauna. The number of alien species in freshwater ecosystems probably will increase in the future as new aliens are moved outside of their native ranges.

AN ASSESSMENT OF THE TOXICITY OF PHTHALATE ESTERS TO FRESHWATER BENTHOS. 1. AQUEOUS EXPOSURES

EPA Science Inventory

Tests were performed with the freshwater invertebrates, Hyalella azteca, Chironomus tentans, and Lumbriculus variegatus to determine the acute toxicity of six phthalate esters, including dimethyl phthalate (DMP), diethyl phthalate (DEP), di-n-butyl phthalate (DBP), butylbenzyl ph...

BENTHOS AS THE BASIS FOR ARCTIC FOOD WEBS

EPA Science Inventory

Plankton have traditionally been viewed as the basis for limnetic food webs, with zooplankton acting as a gateway for energy passing between phytoplanktonic primary producers and fish. Often, benthic production is considered to be important primarily in shallow systems or as a su...

Prey selection by two benthic fish species in a Mato Grosso stream, Rio de Janeiro, Brazil.

PubMed

Rezende, Carla Ferreira; Mazzoni, Rosana; Caramaschi, Erica Pellegrini; Rodrigues, Daniela; Moraes, Maíra

2011-12-01

Key to understand predator choice is the relationship between predator and prey abundance. There are few studies related to prey selection and availability. Such an approach is still current, because the ability to predict aspects of the diet in response to changes in prey availability is one of the major problems of trophic ecology. The general objective of this study was to evaluate prey selection by two species (Characidium cf. vidali and Pimelodella lateristriga) of the Mato Grosso stream, in Saquarema, Rio de Janeiro, Brazil. Benthos and fishes were collected in June, July and September of 2006 and January and February of 2007. Fish were collected with electric fishing techniques and benthos with a surber net. Densities of benthic organisms were expressed as the number of individuals per/m2. After sampling, the invertebrates were fixed in 90% ethanol, and, in the laboratory, were identified to the lowest taxonomical level. Approximately, seventy individuals from each species were selected randomly in each month. Fishes were fixed in 10% formalin in the field and transferred to 70 degrees GL ethanol in the laboratory. Fishes had their stomachs removed for subsequent analysis. Fish diet was described according to the numeric frequency method. The Manly Electivity Index was applied in order to verify prey selection. The most abundant families in both benthos and diet of both fish species were the same, indicating that these species consume mainly most abundant prey in the environment. We concluded that prey selection occurs even for preys that had small abundance in the environment. However, it is the availability of the macroinvertebrate resources that determines the major composition of items in diet of fish, demonstrating that the abundance is the factor that most influences the choice of prey.

Benthic Foraminifera, Food in the Deep Sea, and Limits to Bentho-Pelagic Coupling

NASA Astrophysics Data System (ADS)

Thomas, E.; Boscolo-Galazzo, F.; Arreguin-Rodrigu, G. J.; Ortiz, S.; Alegret, L.

2015-12-01

The deep-sea is the largest habitat on Earth, contains highly diverse biota, but is very little known. Many of its abundant benthic biota (e.g., nematodes) are not preserved in the fossil record. Calcareous and agglutinated benthic foraminifera (unicellular eukaryotes, Rhizaria; efficient dispersers) and ostracodes (Animalia, Crustacea; non-efficient dispersers) are the most common organisms providing a fossil record of deep-sea environments. Very little food is supplied to the deep-sea, because organic matter produced by photosynthesis is largely degraded before it arrives at the seafloor. Only a few % of organic matter is carried to the ocean bottom by 'marine snow', with its particle size and behavior in the water column controlled by surface ecosystem structure, including type of dominant primary producers (diatoms, cyanobacteria). Food supply and its seasonality are generally seen as the dominant control on benthic assemblages (combined with oxygenation), providing bentho-pelagic coupling between primary and benthic productivity. Benthic foraminiferal assemblages (composition and density) thus are used widely to estimate past productivity, especially during episodes of global climate change, ocean acidification, and mass extinction of primary producers. We show that some environmental circumstances may result in interrupting bentho-pelagic coupling, e.g. through lateral supply of organic matter along continental margins (adding more refractory organic matter), through trophic focusing and/or fine particle winnowing on seamounts (giving an advantage to suspension feeders), and through carbonate undersaturation (giving advantage to infaunal over epifaunal calcifyers). In addition, increased remineralization of organic matter combined with increased metabolic rates may cause assemblages to reflect more oligotrophic conditions at stable primary productivity during periods of global warming. As a result, benthic foraminiferal accumulation rates must be carefully evaluated before use as proxies for primary productivity.

Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

NASA Astrophysics Data System (ADS)

Stief, P.

2013-12-01

Invertebrate animals that live at the bottom of aquatic ecosystems (i.e., benthic macrofauna) are important mediators between nutrients in the water column and microbes in the benthos. The presence of benthic macrofauna stimulates microbial nutrient dynamics through different types of animal-microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal-microbe interactions in the benthos of aquatic ecosystems: (i) ecosystem engineering, (ii) grazing, and (iii) symbiosis. Their specific contributions to the turnover of fixed nitrogen (mainly nitrate and ammonium) and the emission of the greenhouse gas nitrous oxide are evaluated. Published data indicate that ecosystem engineering by sediment-burrowing macrofauna stimulates benthic nitrification and denitrification, which together allows fixed nitrogen removal. However, the release of ammonium from sediments is enhanced more strongly than the sedimentary uptake of nitrate. Ecosystem engineering by reef-building macrofauna increases nitrogen retention and ammonium concentrations in shallow aquatic ecosystems, but allows organic nitrogen removal through harvesting. Grazing by macrofauna on benthic microbes apparently has small or neutral effects on nitrogen cycling. Animal-microbe symbioses provide abundant and distinct benthic compartments for a multitude of nitrogen-cycle pathways. Recent studies reveal that ecosystem engineering, grazing, and symbioses of benthic macrofauna significantly enhance nitrous oxide emission from shallow aquatic ecosystems. The beneficial effect of benthic macrofauna on fixed nitrogen removal through coupled nitrification-denitrification can thus be offset by the concurrent release of (i) ammonium that stimulates aquatic primary production and (ii) nitrous oxide that contributes to global warming. Overall, benthic macrofauna intensifies the coupling between benthos, pelagial, and atmosphere through enhanced turnover and transport of nitrogen.

Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

NASA Astrophysics Data System (ADS)

Stief, P.

2013-07-01

Invertebrate animals that live at the bottom of aquatic ecosystems (i.e., benthic macrofauna) are important mediators between nutrients in the water column and microbes in the benthos. The presence of benthic macrofauna stimulates microbial nutrient dynamics through different types of animal-microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal-microbe interactions in the benthos of aquatic ecosystems: (i) ecosystem engineering, (ii) grazing, and (iii) symbiosis. Their specific contributions to the turnover of fixed nitrogen (mainly nitrate and ammonium) and the emission of the greenhouse gas nitrous oxide are evaluated. Published data indicate that ecosystem engineering by sediment-burrowing macrofauna stimulates benthic nitrification and denitrification, which together allows fixed nitrogen removal. However, the release of ammonium from sediments often is enhanced even more than the sedimentary uptake of nitrate. Ecosystem engineering by reef-building macrofauna increases nitrogen retention and ammonium concentrations in shallow aquatic ecosystems, but allows organic nitrogen removal through harvesting. Grazing by macrofauna on benthic microbes apparently has small or neutral effects on nitrogen cycling. Animal-microbe symbioses provide abundant and distinct benthic compartments for a multitude of nitrogen-cycle pathways. Recent studies revealed that ecosystem engineering, grazing, and symbioses of benthic macrofauna significantly enhance nitrous oxide emission from shallow aquatic ecosystems. The beneficial effect of benthic macrofauna on fixed nitrogen removal through coupled nitrification-denitrification can thus be offset by the concurrent release of (i) ammonium that stimulates aquatic primary production and (ii) nitrous oxide that contributes to global warming. Overall, benthic macrofauna intensifies the coupling between benthos, pelagial, and atmosphere through enhanced turnover and transport of nitrogen.

Benthic and Pelagic Contributions to Mysis Nutrition across Lake Superior

EPA Science Inventory

Quantification of the sources of nutrition to Mysis diluviana is needed to better understand the basis for production in Mysis lakes and to improve models of migration-driven nutrient and contaminant transport. We collected Mysis, plankton, and benthos across Lake Superior using ...

BENTHIC-PELAGIC COUPLING IN PLANKTONIC CRUSTACEANS: THE ROLE OF THE BENTHOS. (R824771)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

DREDGING IMPACT ON AN URBANIZED FLORIDA BAYOU: EFFECTS ON BENTHOS AND ALGAL-PERIPHYTON.

EPA Science Inventory

Environmental effects of dredging events have been uncommonly reported for shallow, residential estuaries characteristic of the Gulf of Mexico region. The objective of this study was to determine the impact of hydraulic dredging on an urbanized estuary. Physicochemical quality, ...

Three New Records of Gastropoda (Mollusca) from the Nansha Islands, China

NASA Astrophysics Data System (ADS)

Chen, Zhiyun; Shi, Wei; Gong, Li

2018-04-01

The Nansha Islands, China, have extremely high marine biodiversity and hundreds of mollusks have been reported there. Benthos resources investigations of the intertidal and subtidal zone around the Nansha Islands have been continuously performed for decades, and recently, dozens of new species and new records of mollusks have been reported from this area. This paper dealt with three new record species of the Gastropoda from Chinese waters: Cerithium salebrosum Sowerby II, 1855, Vexillum militare (Reeve, 1845) and Vexillum bizonale (Dautzenberg et Bouge, 1923), respectively belonging to three families: Cerithiidae Fleming, 1822, and Costellariidae MacDonald, 1860. All specimens were collected from the Nansha Islands during the benthos resources investigations on the intertidal zone of islands and reefs in the South China Sea in recent years. Diagnosis and geographic descriptions of both genus and species, illustrations of each species were given in this contribution, and discussion of taxonomy, identification features and faunal characteristics were presented. All examined specimens were deposited in the Marine Biodiversity Collections of South China Sea, Chinese Academy of Sciences.

Open ocean pelago-benthic coupling: cyanobacteria as tracers of sedimenting salp faeces

NASA Astrophysics Data System (ADS)

Pfannkuche, Olaf; Lochte, Karin

1993-04-01

Coupling between surface water plankton and abyssal benthos was investigated during a mass development of salps ( Salpa fusiformis) in the Northeast Atlantic. Cyanobacteria numbers and composition of photosynthetic pigments were determined in faeces of captured salps from surface waters, sediment trap material, detritus from plankton hauls, surface sediments from 4500-4800 m depth and Holothurian gut contents. Cyanobacteria were found in all samples containing salp faeces and also in the guts of deep-sea Holothuria. The ratio between zeaxanthin (typical of cyanobacteria) and sum of chlorophyll a pigments was higher in samples from the deep sea when compared to fresh salp faeces, indicating that this carotenoid persisted longer in the sedimenting material than total chlorophyll a pigments. The microscopic and chemical observations allowed us to trace sedimenting salp faeces from the epipelagial to the abyssal benthos, and demonstrated their role as a fast and direct link between both systems. Cyanobacteria may provide a simple tracer for sedimenting phytodetritus.

Dynamics of Interactions Among Particles, Fluids and Biota and Imposing of Multiple Constraints as a General Strategy for Interdisciplinary Problems.

DTIC Science & Technology

1995-05-01

This grant finished our focused, simultaneous efforts on the mechanics of particle coagulation in the water column, of suspension feeding in the water column and the benthos, and of particle deposition to the seabed.

DEVELOPMENT OF A STREAM BENTHOS INTEGRITY INDEX (SBII) FOR THE MID-ATLANTIC HIGHLANDS REGION

EPA Science Inventory

A multimetric index using benthic macroinvertebrates was developed to evaluate the biological condition of wadeable streams in the MAHA region. Ecological concepts and biodiversity of macroinvertebrates were used to develop the SBII, and then a statistical approach was used to va...

BENTHIC PRODUCTION AS THE BASE FOR FOOD WEBS IN ALASKAN ARCTIC LAKES

EPA Science Inventory

Plankton are traditionally viewed as the basis for limnetic food webs, with zooplankton acting as an energy gateway between phytoplanktonic primary producers and fish. Often, benthic production is considered to be important primarily to the benthos and in shallow systems, such as...

THE RESPONSE OF MARINE ECOSYSTEMS TO CLIMATE VARIABILITY ASSOCIATED WITH THE NORTH ATLANTIC OSCILLATION

EPA Science Inventory

A strong association is documented between variability of the North Atlantic Oscillation (NAO) and changes in various trophic levels of the marine ecosystems of the North Atlantic. Examples are presented for phytoplankton, zooplankton, benthos, fish, marine diseases, whales and s...

NEW RECORDS AND RANGE EXTENSIONS FOR SEVERAL CHIRONOMID GENERA IN LAKE SUPERIOR

EPA Science Inventory

Recent USEPA investigations of Lake Superior benthos in Minnesota, Wisconsin, and Michigan waters have resulted in the discovery of six uncommon genera of Chironomidae. Five new records of genera for Lake Superior and five significant Nearctic range extensions are reported. New r...

Macroinvertebrate Assemblage Response to Contaminated Sediment Remediation in a Lacustuary System

EPA Science Inventory

Degradation of benthos is a common beneficial use impairments (BUI) at Great Lakes Areas of Concern (AOCs), including the Maumee River, northeastern Ohio. Ottawa River is part of the Maumee River AOC, and has been altered by urban and industrial activities. Contaminated sediment ...

AN ASSESSMENT OF PHTHALATE ESTER TOXICITY TO FRESHWATER BENTHOS: 2. SEDIMENT EXPOSURES

EPA Science Inventory

Seven phthalate esters were evaluated for their stability and 10-d acute toxicity to the freshwater invertebrates Hyalella azteca and Chironomus tentans following incorporation into sediment. The chemicals were diethyl (DEP), di-n-butyl (DBP), di-n-hyxyl (DHP), di-[2-ethylhexyl] ...

The Lives and Times of the Narragansett Bay Benthos: Biodiversity Trends over 182 Years

EPA Science Inventory

Narragansett Bay has high benthic invertebrate biodiversity that supports many ecosystem functions and services. A master list was compiled of all benthic species collected from the Bay beginning in 1862, including a U.S. Bureau of Commercial Fisheries survey in 1871 and studies ...

DEVELOPMENT OF AN INDEX OF BENTHOS INTEGRITY USING MACROINVERTEBRATES FOR NEW JERSEY LAKES AND RESERVOIRS

EPA Science Inventory

Recently there has been a greater focus by the USEPA on bioassessment and biocriteria development for lakes and reservoirs. In this study a multimetric index was developed to evaluate the condition of New Jersey lakes and reservoirs using benthic macroinvertebrates. Samples were ...

Big Numbers for the Big Lake: A Lower Food Web Assessment of Lake Superior (2004-2006)

EPA Science Inventory

Our collaborative binational studies focused on lower trophic levels (plankton, mysids, benthos) of Lake Superior based on comprehensive sampling (2004 to 2006). Information is integrated for a lakewide summary, but also to display patterns among lower food web components by dept...

Weak Effects of Urbanization on Macroinvertebrate Assemblages in Mid-continent, USA, Great Rivers

EPA Science Inventory

Effects of urbanization on rivers are not well studied in the US, especially for our largest rivers. We compared the macroinvertebrate assemblages on snags and in the littoral benthos between urban and non-urban reaches of the Upper Mississippi and Lower Missouri Rivers. We used ...

Application of a Tenax Model to Assess Bioavailability of Polychlorinated Biphenyls in Field Sediments

EPA Science Inventory

Recent literature has shown that bioavailability-based techniques, such as Tenax extraction, can estimate sediment exposure to benthos. In a previous study by the authors,Tenax extraction was used to create and validate a literature-based Tenax model to predict oligochaete bioac...

GENERAL GUIDELINES FOR USING THE SEDIMENT QUALITY TRIAD

EPA Science Inventory

The Sediment Quality Triad(Fig. 1),developed in the mid-1980s (Long and Chapman, 1985), is now widely used for conducting integrated assessments of sediment quality based on measures of chemistry,toxicity and benthos(e.g.,Canfield et al., 1994,1996,submitted; Carr et al., 1996;Ch...

Development of a River and Stream Water Quality Module

DTIC Science & Technology

2009-06-01

suspended or actively swimming in the water column are referred to as phytoplankton . The term " periphyton " is sometimes used to refer to benthic algae...benthos, and periphyton . ERDC/EL TR-09-4 21 Phytoplankton The phytoplankton biomass increases due to photosynthesis and is lost via respiration...19 Phytoplankton

Comparison of benthic bacterial community composition in nine streams

Treesearch

Xueqing Gao; Ola A. Olapade; Laura G. Leff

2005-01-01

In this study, the abundance of major bacterial taxa (based on fluorescent in situ hybridization, FISH) and the structure of the bacterial community (based on denaturing gradient gel electrophoresis, DGGE) were determined in the benthos of 9 streams in the southeastern and midwestern United States and related to differences in environmental...

Camparison of benthic bacterial community composition in nine streams

Treesearch

Xuqing Gao; Ola A. Olapade; Laura G. Leff

2005-01-01

In this study, the abundance of major bacterial taxa (based on fluorescent in situ hybridization, FISH) and the structure of the bacterial community (based on denaturing gradient gel electrophoresis, DGGE) were determined in the benthos of 9 streams in the southeastern and midwestern United States and related to differences in environmental conditions. Taxa examined...

Exploiting Habitat and Gear Patterns for Efficient Detection of Rare and Non-native Benthos and Fish in Great Lakes Coastal ecosystems

EPA Science Inventory

There is at present no comprehensive early-detection monitoring for exotic species in the Great Lakes, despite their continued arrival and impacts and recognition that early detection is key to effective management. We evaluated strategies for efficient early-detection monitorin...

The Deep-Sea Benthos in the Gulf of Mexico.

DTIC Science & Technology

context has been a collection (by biological dredge) of rocks from the Sigsbee Knolls that date to Carboniferous age. Since the oldest rocks known...from any ocean basin up to this time are of Cretaceous age, the present discovery provides the oldest rock (318 million years) found in any ocean basin

Evaluation of the lake macroinvertebrate integrity index (LMII) and alternate indices for eastern U.S. lakes and reservoirs

EPA Science Inventory

We applied the Lake Macroinvertebrate Integrity Index (LMII) to 69 lakes and reservoirs across the eastern United States. Genus-level sub-littoral benthos samples, collected by EPA Regions 2 and 3 in 2007, were used to calcualte LMII scores for each lake. We investigated relation...

Can Sediment Total Organic Carbon and Grain Size Be Used to Diagnose Organic Enrichment in Estuaries

EPA Science Inventory

Eutrophication (i.e., nutrient enrichment, organic enrichment and oxygen depletion) is one of the most common sources of impairment in 303(d) listed waters in the United States. While eutrophication can eventually cause adverse effects to the benthos, it may be hard to diagnose....

Long-term impacts of coral bleaching events on the world's warmest reefs.

PubMed

Burt, John; Al-Harthi, Suaad; Al-Cibahy, Ashraf

2011-10-01

The southern Arabian Gulf houses some of the most thermally tolerant corals on earth, but severe bleaching in the late 1990s caused widespread mortality. More than a decade later, corals still dominated benthos (mean: 40 ± 3% cover on 10 sites spanning > 350 km; range: 11.0-65.6%), but coral communities varied spatially. Sites to the west generally had low species richness and coral cover (mean: 3.2 species per transect, 31% cover), with Porites dominated communities (88% of coral) that are distinct from more diverse and higher cover eastern sites (mean: 10.3 species per transect, 62% cover). These patterns reflect both the more extreme bleaching to the west in the late 1990s as well as the higher faviid dominated recruitment to the east in subsequent years. There has been limited recovery of the formerly dominant Acropora, which now represents <1% of the benthos, likely as a result of recruitment failure. Results indicate that severe bleaching can have substantial long-term impacts on coral communities, even in areas with corals tolerant to environmental extremes. Copyright © 2011 Elsevier Ltd. All rights reserved.

Diel resource partitioning among juvenile Atlantic Salmon, Brown Trout, and Rainbow Trout during summer

USGS Publications Warehouse

Johnson, James H.; McKenna, James E.

2015-01-01

Interspecific partitioning of food and habitat resources has been widely studied in stream salmonids. Most studies have examined resource partitioning between two native species or between a native species and one that has been introduced. In this study we examine the diel feeding ecology and habitat use of three species of juvenile salmonids (i.e., Atlantic Salmon Salmo salar, Brown Trout Salmo trutta, and Rainbow Trout Oncorhynchus mykiss) in a tributary of Skaneateles Lake, New York. Subyearling Brown Trout and Rainbow Trout fed more heavily from the drift than the benthos, whereas subyearling Atlantic Salmon fed more from the benthos than either species of trout. Feeding activity of Atlantic Salmon and Rainbow Trout was similar, with both species increasing feeding at dusk, whereas Brown Trout had no discernable feeding peak or trough. Habitat availability was important in determining site-specific habitat use by juvenile salmonids. Habitat selection was greater during the day than at night. The intrastream, diel, intraspecific, and interspecific variation we observed in salmonid habitat use in Grout Brook illustrates the difficulty of acquiring habitat use information for widespread management applications.

Late Permian marine ecosystem collapse began in deeper waters: evidence from brachiopod diversity and body size changes.

PubMed

He, W-H; Shi, G R; Twitchett, R J; Zhang, Y; Zhang, K-X; Song, H-J; Yue, M-L; Wu, S-B; Wu, H-T; Yang, T-L; Xiao, Y-F

2015-03-01

Analysis of Permian-Triassic brachiopod diversity and body size changes from different water depths spanning the continental shelf to basinal facies in South China provides insights into the process of environmental deterioration. Comparison of the temporal changes of brachiopod diversity between deepwater and shallow-water facies demonstrates that deepwater brachiopods disappeared earlier than shallow-water brachiopods. This indicates that high environmental stress commenced first in deepwater settings and later extended to shallow waters. This environmental stress is attributed to major volcanic eruptions, which first led to formation of a stratified ocean and a chemocline in the outer shelf and deeper water environments, causing the disappearance of deep marine benthos including brachiopods. The chemocline then rapidly migrated upward and extended to shallow waters, causing widespread mass extinction of shallow marine benthos. We predict that the spatial and temporal patterns of earlier onset of disappearance/extinction and ecological crisis in deeper water ecosystems will be recorded during other episodes of rapid global warming. © 2014 John Wiley & Sons Ltd.

Characteristics of radionuclide accumulation in benthic organisms and fish of the Barents and Kara Seas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matishov, G.G.; Matishov, D.G.; Rissanen, C.

1995-05-01

Artificial radionuclides play a specific role in the hydrochemical, geochemical, and hydrobiological processes that are currently occurring in the western Arctic. The existing data on radioactive contamination of different plant and animal species inhabiting the sea shelf are fragmentary. Hence, it was difficult to follow the transformation of radionuclides during their transmission along food chains, from phyto- and zoo-plankton to benthos, fish, birds, and marine mammals. In 1990-1994, the Murmansk Institute of Marine Biology organized expeditions to collect samples of residues on the sea floor and also of benthos, benthic fish, macrophytes, and other organisms inhabiting the shelf of themore » Barents and Kara Seas. These samples were tested for cesium-137, cesium-134, strontium-90, plutonium-239, plutonium-240, americium-241, and cobalt-60 in Rovaniemi (Finland) by the regional radiation administration of the Finnish Centre for Radiation and Nuclear Safety. Over 1000 tests were made. Their results provided new data on the content and distribution of these radionuclides among different components of marine ecosystems. 7 refs.« less

Trophic relationships at intrannual spatial and temporal scales of macro and megafauna around a submarine canyon off the Catalonian coast (western Mediterranean)

NASA Astrophysics Data System (ADS)

Cartes, Joan E.; Fanelli, Emanuela; Papiol, Vanesa; Maynou, Francesc

2010-04-01

The spatial and temporal changes of near-bottom macrofauna (suprabenthos and macroplankton) and the trophic relationships of megabenthic decapod crustaceans were analyzed off the Catalonian coasts (western Mediterranean) around Berenguera submarine canyon in four periods (April and December 1991, March and July 1992) and four zones (within Berenguera Canyon at ca. 450 m, and on adjacent slope at ca. 400, 600 m and 1200 m). In March 1992, we found the highest macrofauna abundance and the smallest sizes in the canyon, suggesting a positive effect of river discharges on suprabenthos recruitment. By contrast, macroplankton (decapods, fishes and euphausiids) did not show higher recruitment into canyons. After analyzing the diet of 23 decapod crustaceans, we found a significant segregation between guilds feeding on zooplankton and on benthos. Zooplankton (euphausiids and Pasiphaeidae) and infauna (polychaetes, Calocaris macandreae and ophiuoroids) were consistently the main prey exploited by decapod crustaceans around Berenguera Canyon. We also found some macrophyte ( Posidonia oceanica) consumption, which was higher in periods of water column homogeneity (winter-spring and late autumn). Positive correlations between decapods' gut fullness ( F) and decapod abundance indicate feeding aggregations, while positive correlations were also found between F and Llobregat River (situated ca. 18 km from Berenguera head) flow 1 to 2 months before sampling. Increases in F were delayed only 1 month when zooplankton feeders were analyzed alone, while benthos feeders did not show significant relationships with any environmental variables. That indicates that the response of megabenthic decapods feeding on benthos to environmental shifts is slower than that of zooplankton feeders. The importance of river flows in enhancing food supply of macro- and megabenthos dwelling close to submarine canyons was apparent, with a delay in the fauna response of 0-2 months after river flow peaks.

Changes in Benthos Associated with Mussel (Mytilus edulis L.) Farms on the West-Coast of Scotland

PubMed Central

Wilding, Thomas A.; Nickell, Thomas D.

2013-01-01

Aquaculture, as a means of food production, is growing rapidly in response to an increasing demand for protein and the over-exploitation of wild fisheries. This expansion includes mussels (family Mytilidae) where production currently stands at 1.5 million tonnes per annum. Mussel culture is frequently perceived as having little environmental impact yet mussel biodeposits and shell debris accumulate around the production site and are linked to changes in the benthos. To assess the extent and nature of changes in benthos associated with mussel farming grab and video sampling around seven mussel farms was conducted. Grab samples were analysed for macrofauna and shell-hash content whilst starfish were counted and the shell-hash cover estimated from video imaging. Shell-hash was patchily distributed and occasionally dominated sediments (maximum of 2116 g per 0.1 m2 grab). Mean shell-hash content decreased rapidly at distances >5 m from the line and, over the distance 1–64 m, decreased by three orders of magnitude. The presence of shell-hash and the distance-from-line influenced macrofaunal assemblages but this effect differed between sites. There was no evidence that mussel farming was associated with changes in macrobenthic diversity, species count or feeding strategy. However, total macrofaunal count was estimated to be 2.5 times higher in close proximity to the lines, compared with 64 m distance, and there was evidence that this effect was conditional on the presence of shell-hash. Starfish density varied considerably between sites but, overall, they were approximately 10 times as abundant close to the mussel-lines compared with 64 m distance. There was no evidence that starfish were more abundant in the presence of shell-hash visible on the sediment surface. In terms of farm-scale benthic impacts these data suggest that mussel farming is a relatively benign way of producing food, compared with intensive fish-farming, in similar environments. PMID:23874583

The Role of Physical-Chemical Factors in Structuring Subtidal Marine and Estuarine Benthos.

DTIC Science & Technology

1983-06-01

Yucatan and West Indies (Bahr 1981), and has even been 29 reported from Brazil (Gunter 1951). The Pacific oyster (Oystrea lurida) replaces the Atlantic...N. T. 1970. "The Role of Zooplankton in the Nutrition of Scleractinian Corals," Limnol. Oceanogr., 15:579-586. Johnson, R. G. 1970. "Variations in

NUTRIENT FLUX AT THE SEDIMENT-WATER INTERFACE IN ESCAMBIA BAY, FL, A NORTHERN GULF OF MEXICO ESTUARY INVITED SEMINAR

EPA Science Inventory

(Abstract). Presented at the University of Texas Marine Science Institute, 30 April 2001, Port Aransas, TX. 1 p. (ERL,GB R841).

Nutrient flux at the sediment-water interface is an integral component of estuarine dynamics, and the benthos may represent a significant source ...

The first cyanobacterial infection of crustose coralline algae discovered on the reefs of Pohnpei, Micronesia

USGS Publications Warehouse

Aeby, Greta S.; Work, Thierry M.; Hughen, Konrad A.

2014-01-01

Crustose coralline algae (CCA) can cover substantial areas on living reef benthos (Adey et al. 1982, Keats et al. 1997), are important to reef integrity by acting to cement reefs together (Littler and Littler 1984), and serve as recruitment sites for coral larvae (Lasker and Kim 1996, Harrington et al. 2004, Price 2010).

Invertebrates of Meadow Creek, Union County, Oregon, and their use as food by trout.

Treesearch

Carl E. McLemore; William R. Meehan

1988-01-01

From 1976 to 1980, invertebrates were collected three times each year from several reaches of Meadow Creek in eastern Oregon. Five sampling methods were used: benthos, drift, sticky traps, water traps, and fish stomachs. A total of 372 taxa were identified, of which 239 were used as food by rainbow trout (steelhead; Salmo gairdneri Richardson). Of...

Meet the Arctic Benthos. Arctic Ocean Exploration--Grades 7-8. Benthic Invertebrate Groups in the Deep Arctic Ocean.

ERIC Educational Resources Information Center

National Oceanic and Atmospheric Administration (DOC), Rockville, MD.

This activity introduces students to major groups of invertebrates that have been found in other polar ocean expeditions and acquaints them with the feeding habits of these animals as a basis for making inferences about benthic communities and their connection to other components of the Artic Ocean ecosystem. The activity provides learning…

Comparative diets of subyearling Atlantic salmon and subyearling coho salmon in Lake Ontario tributaries

USGS Publications Warehouse

Johnson, James H.; Ringler, Neil H.

2016-01-01

Restoration of Atlantic salmon (Salmo salar) in Lake Ontario could potentially be negatively affected by the presence of non-native salmonids that are naturalized in the basin. Coho salmon (Oncorhynchus kisutch) have been spawning successfully in Lake Ontario tributaries for over 40 years and their juveniles will reside in streams with juvenile Atlantic salmon for one year. This study sought to examine interspecific diet associations between these species, and to compare diets to the composition of the benthos and drift in three Lake Ontario tributaries. Aquatic insects, mainly ephemeropterans and chironomids were the major prey consumed by subyearling Atlantic salmon whereas terrestrial invertebrates made up only 3.7% of the diet. Ephemeropterans and chironomids were the primary aquatic taxa consumed by subyearling coho salmon but, as a group, terrestrial invertebrates (41.8%) were the major prey. In sympatry, Atlantic salmon fed more actively from the benthos whereas the diet of coho salmon was more similar to the drift. The different feeding pattern of each species resulted in low interspecific diet similarity. There is likely little competition between these species for food in Lake Ontario tributaries as juveniles.

Diel resource partitioning among juvenile Atlantic Salmon, Brown Trout, and Rainbow Trout during summer

USGS Publications Warehouse

Johnson, James H.; McKenna, James E.

2015-01-01

Interspecific partitioning of food and habitat resources has been widely studied in stream salmonids. Most studies have examined resource partitioning between two native species or between a native species and one that has been introduced. In this study we examine the diel feeding ecology and habitat use of three species of juvenile salmonids (i.e., Atlantic Salmon Salmo salar, Brown Trout Salmo trutta, and Rainbow Trout Oncorhynchus mykiss) in a tributary of Skaneateles Lake, New York. Subyearling Brown Trout and Rainbow Trout fed more heavily from the drift than the benthos, whereas subyearling Atlantic Salmon fed more from the benthos than either species of trout. Feeding activity of Atlantic Salmon and Rainbow Trout was similar, with both species increasing feeding at dusk, whereas Brown Trout had no discernable feeding peak or trough. Habitat availability was important in determining site-specific habitat use by juvenile salmonids. Habitat selection was greater during the day than at night. The intrastream, diel, intraspecific, and interspecific variation we observed in salmonid habitat use in Grout Brook illustrates the difficulty of acquiring habitat use information for widespread management applications.

Development of an Advanced Respirometer for Experimental Studies of Benthic Rate Processes

NASA Astrophysics Data System (ADS)

Barry, J. P.; Buck, K. R.; Okuda, C.; Risi, M.; Parker, M.; Levesque, C.

2005-05-01

Rates of carbon remineralization and nutrient cycling by seafloor biotic assemblages are influenced by the availability of organic material, temperature, and oxygen availability, among other factors. The relative importance of various factors in controlling carbon cycling by the sediment community is poorly constrained, in part by technological limits on experiments that evaluate independently the effects of these factors. We have developed an advanced respiration chamber system capable of repeated rate measurements during a single deployment, with added capabilities for manipulating conditions within replicate chambers to test hypotheses concerning biogeochemical cycling by the benthos. The ROV-deployed respiration system has 12 syringes for tracer injection or sample withdrawal from 3 respiration chambers, pH, oxygen, and temperature sensors, stirring paddles, and a recirculation pump. The pump system is used to flush each chamber at preprogrammed intervals or oxygen tensions. Areas of investigation that are enabled by the system include the effects various factors on benthic oxygen consumptions (e.g. hypercapnia (elevated CO2), acidosis, ambient oxygen availability, temperature, organic carbon availability), rates of nutrient regeneration by the benthos in response to organic enrichments (labile and refractory organic carbon), time lags in carbon uptake and trophic pathways in responses to organic enrichment.

Trophic interactions of fish communities at midwater depths enhance long-term carbon storage and benthic production on continental slopes

PubMed Central

Trueman, C. N.; Johnston, G.; O'Hea, B.; MacKenzie, K. M.

2014-01-01

Biological transfer of nutrients and materials between linked ecosystems influences global carbon budgets and ecosystem structure and function. Identifying the organisms or functional groups that are responsible for nutrient transfer, and quantifying their influence on ecosystem structure and carbon capture is an essential step for informed management of ecosystems in physically distant, but ecologically linked areas. Here, we combine natural abundance stable isotope tracers and survey data to show that mid-water and bentho-pelagic-feeding demersal fishes play an important role in the ocean carbon cycle, bypassing the detrital particle flux and transferring carbon to deep long-term storage. Global peaks in biomass and diversity of fishes at mid-slope depths are explained by competitive release of the demersal fish predators of mid-water organisms, which in turn support benthic fish production. Over 50% of the biomass of the demersal fish community at depths between 500 and 1800 m is supported by biological rather than detrital nutrient flux processes, and we estimate that bentho-pelagic fishes from the UK–Irish continental slope capture and store a volume of carbon equivalent to over 1 million tonnes of CO2 every year. PMID:24898373

EFFECTS OF THE INVASIVE, NONINDIGENOUS SEAGRASS ZOSTERA JAPONICA ON NUTRIENT FLUXES BETWEEN THE WATER COLUMN AND BENTHOS IN A NE PACIFIC ESTUARY

EPA Science Inventory

Since its introduction in the early to mid-20th century, the Asian seagrass Zostera japonica has become established in marine and mesohaline portions of many estuaries in the Pacific Northwest. Z. japonica forms dense patches from 0.3-2.4m above mean lower low water, a zone that...

Underappreciated species in ecology: "ugly fish" in the northwest Atlantic Ocean.

PubMed

Link, Jason S

2007-10-01

Species shifts and replacements are common in ecological studies. Observations thereof serve as the impetus for many ecological endeavors. Many of the species now known to dominate ecosystem functioning were largely ignored until studies of those underappreciated species elucidated their critical roles. Recognizing the potential importance of underappreciated species has implications for functional redundancies in ecosystems and should alter our approach to long-term monitoring. One example of an applied ecological system containing species shifts, underappreciated species, and potential changes in functional redundancies is the topic of fisheries. The demersal component of many fish communities usually consists of high-profile and commercially valuable species that are targets of fisheries, plus a diverse group of lesser known species that have minimal commercial value and focus. Yet ecologically these traditionally nontargeted species are often a major biomass sink in marine ecosystems and can also be critical in the functioning of bentho-demersal food webs. I examined the biomass trajectories of several species of skates, cottids, lophiids, anarhichadids, zooarcids, and similar species in the northeast U.S. Atlantic ecosystem to determine whether their relative abundance has changed across the past four decades. Distribution and stomach contents of these species were also evaluated over time to further elucidate the relative importance of these species. Landings of these underappreciated bentho-demersal fish were also examined in comparison to those species that historically have been commercially targeted. Of particular emphasis was the evaluation of evidence for sequential stock depletion and the ramifications for functional redundancy for this ecosystem. Results indicate that some of these fish species are now the dominant piscivores, benthivores, and scavengers in this ecosystem. These formerly under-studied species generally have either maintained a consistent population size or have increased in abundance (and expanded in distribution) over the past several decades. Nontraditionally targeted fish species are an often overlooked but important component of bentho-demersal fish communities. Implications for the energy flow and resilience specifically for future fisheries and generally for harvesting biological resources are significant, remaining critical issues for the world's ecosystems.

Are boundary conditions in surface productivity at the Southern Polar Front reflected in benthic activity?

NASA Astrophysics Data System (ADS)

Brandt, Angelika; Vanreusel, Ann; Bracher, Astrid; Jule Marie Hoppe, Clara; Lins, Lidia; Meyer-Löbbecke, Anna; Altenburg Soppa, Mariana; Würzberg, Laura

2014-10-01

In austral summer 2012, during the expedition ANT-XXVIII/3 on board RV Polarstern, two sites were sampled 1600 km apart in the South Polar Front area (52°S) at the boundary of different productivity regimes for meio- and macrobenthos using a multiple-corer and an epibenthic sledge, respectively. Patterns in density and abundance data were compared between different size classes of the benthos and interpreted in relation to surface primary productivity data and sediment oxygen consumption. We tested the hypothesis that long-term satellite-derived surface phytoplankton biomass, in situ real time biomass, and productivity measurements at the surface and throughout the euphotic zone are reflected in abyssal benthos densities, abundances and activity. Specifically, we investigated the effect of boundary conditions for lower and higher surface productivity. Surface and integrated to 100 m depth biomass and primary productivity measurements vary stations, with the lowest values at station 85 (0.083 mg Chl-a m-3 at surface, 9 mg Chl-a m-2 and 161 mg C m-2 d-1- integrated over the first 100 m depth), and the highest values at station 86 (2.231 mg Chl-a m-3 at surface, 180 mg Chl-a m-2 and 2587 mg C m-2 d-1 integrated over first 100 m depth). Total meiofaunal densities varied between 102 and 335 individuals/10 cm². Densities were the highest at station 86-30 (335 individuals) and lowest at station 81-13 (102 individuals). Total macrofaunal densities (individuals/1000 m²) varied between 26 individuals at station 81-17 and 194 individuals at station 86-24. However, three EBS hauls were taken at station 86 with a minimum of 80 and a maximum of 194 individuals. Sediment oxygen consumption did not vary significantly between stations from east to west. Bentho-pelagic coupling of meio- and macrobenthic communities could not be observed in the South Polar Front at the boundary conditions from low to high surface productivity between stations 81 and 86.

Application of the Benthic Ecosystem Quality Index 2 to benthos in Dutch transitional and coastal waters

NASA Astrophysics Data System (ADS)

van Loon, W. M. G. M.; Boon, A. R.; Gittenberger, A.; Walvoort, D. J. J.; Lavaleye, M.; Duineveld, G. C. A.; Verschoor, A. J.

2015-09-01

The Benthic Ecosystem Quality Index 2 (BEQI2) is the Dutch multi-metric index (MMI) for assessing the status and trend of benthic invertebrates in transitional and coastal waters for the Water Framework Directive (WFD). It contains the same indicators, i.e. species richness, Shannon index and AMBI, as in the multivariate m-AMBI. The latter MMI has been adopted by several European countries in the context of WFD implementation. In contrast to m-AMBI, the BEQI2 calculation procedure has been strongly simplified and consists of two steps, i.e. the separate indicator values are normalized using their long-term reference values resulting in three Ecological Quality Ratios (EQRs), which are subsequently averaged to give one BEQI2 value. Using this method only small numbers of samples need to be analysed by Dutch benthos laboratories annually, without the necessity to co-analyse a larger historical dataset. BEQI2 EQR values appeared to correlate quantitatively very well with m-AMBI EQR values. In addition, a data pooling procedure has been added to the BEQI2 tool which enables the pooling of small core samples (0.01-0.025 m2) into larger standardized data pools of 0.1 m2 in order to meet the data requirements of the AMBI indicator and to obtain comparable reference values. Furthermore, the BEQI2 tool automatically and efficiently converts species synonym names into standardized species names. The BEQI2 tool has been applied to all Dutch benthos data monitored by Rijkswaterstaat in the period of 1991-2010 in the transitional and coastal waters and salt lakes and these results are reported here for the first time. Reference values for species richness and Shannon index (99 percentile values) and AMBI reference values (1 percentile values) were estimated for all water body-ecotopes and are discussed. BEQI2 results for all these water bodies are discussed in view of natural and human pressures. The pressure sensitivity of the BEQI2 for sewage and dredging/dumping, via the state variables oxygen and suspended matter respectively, was demonstrated.

Benthic oxygen consumption on continental shelves off eastern Canada

NASA Astrophysics Data System (ADS)

Grant, Jonathan; Emerson, Craig W.; Hargrave, Barry T.; Shortle, Jeannette L.

1991-08-01

The consumption of phytoplankton production by the benthos is an important component of organic carbon budgets for continental shelves. Sediment texture is a major factor regulating benthic processes because fine sediment areas are sites of enhanced deposition from the water column, resulting in increased organic content, bacterial biomass and community metabolism. Although continental shelves at mid- to high latitudes consist primarily of coarse relict sediments ( PIPER, Continental Shelf Research, 11, 1013-1035), shelf regions of boreal and subarctic eastern Canada contain large areas of silt and clay sediments ( FADER, Continental Shelf Research, 11, 1123-1153). We collated estimates of benthic oxygen consumption in coarse (<20% silt-clay, <0.5% organic matter) and fine sediments (20% silt-clay, 0.5% organic matter) for northwest Atlantic continental shelves including new data for Georges Bank, the Scotian Shelf, the Grand Banks of Newfoundland and Labrador Shelf. Estimates were applied to the areal distribution of sediment type on these shelves to obtain a general relationship between sediment texture and benthic carbon consumption. Mean benthic oxygen demand was 2.7 times greater in fine sediment than in coarse sediment, when normalized to mean annual temperature. In terms of carbon equivalents, shelf regions with minimal fine sediment (Georges Bank, the Grand Banks of Newfoundland-northeast Newfoundland) consumed only 5-8% of annual primary production. Benthos of the Gulf of Maine (100% fine sediment) and the Scotian Shelf (35% fine sediment) utilized 16-19% of primary production. Although 32% of the Labrador Shelf area contained fine sediments, benthic consumption of pelagic production (8%) was apparently limited by low mean annual temperature (2°C). These results indicate that incorporation of sediment-specific oxygen uptake into shelf carbon budgets may increase estimates of benthic consumption by 50%. Furthermore, respiration and production by large macrofauna allow an even greater proportion of primary production to enter benthic pathways. Fine sediment areas (shelf basins or "depocenters") are postulated to be sites of enhanced biological activity which must be considered in the modelling of shelf carbon budgets and the role of the benthos in demersal fisheries.

Big River Benthos: Linking Year Round Biological Response to Altered Hydrological Regimes

DTIC Science & Technology

2017-04-02

is also home to a diversity of organisms adapted to large river habitats. Macroinvertebrates have long been used as habitat/water quality indicators...substrates, but lower abundances (Figure 5). Sand was the most frequently encountered substrate (n=52, Figure 6), and comprises approximately 80% of the...June sampling represented as percentages. 8 Because sand is predominant in the LMR, habitats containing a variety of substrates, including silt

The natural diet of a hexactinellid sponge: Benthic pelagic coupling in a deep-sea microbial food web

NASA Astrophysics Data System (ADS)

Pile, Adele J.; Young, Craig M.

2006-07-01

Dense communities of shallow-water suspension feeders are known to sidestep the microbial loop by grazing on ultraplankton at its base. We quantified the diet, rates of water processing, and abundance of the deep-sea hexactinellid sponge Sericolophus hawaiicus, and found that, like their demosponge relatives in shallow water, hexactinellids are a significant sink for ultraplankton. S. hawaiicus forms a dense bed of sponges on the Big Island of Hawaii between 360 and 460 m depth, with a mean density of 4.7 sponges m -2. Grazing of S. hawaiicus on ultraplankton was quantified from in situ samples using flow cytometry, and was found to be unselective. Rates of water processing were determined with dye visualization and ranged from 1.62 to 3.57 cm s -1, resulting in a processing rate of 7.9±2.4 ml sponge -1 s -1. The large amount of water processed by these benthic suspension feeders results in the transfer of approximately 55 mg carbon and 7.3 mg N d -1 m -2 from the water column to the benthos. The magnitude of this flux places S. hawaiicus squarely within the functional group of organisms that link the pelagic microbial food web to the benthos.

The use of innovative screening-level techniques for the bioassessment of estuarine sediments at U.S. Army Aberdeen Proving Ground, MD

DOE Office of Scientific and Technical Information (OSTI.GOV)

Neubauer, R.J.; Thebeau, L.; Paul, J.

1994-12-31

The US Army Aberdeen Proving Ground (APG) is a primarily undeveloped installation on the upper Chesapeake bay in Maryland. The bush and Gunpowder Rivers are two sub-estuaries that run through the installation before emptying into the Chesapeake Bay. Past activities at EA APG include pilot-scale chemical agent manufacturing, munitions testing, smoke/incendiary manufacturing, domestic and rubble landfilling, and disposal of chemical warfare agents as well as other materials. It was determined that if contamination of the Gunpowder River exists from these previous activities on EA APG it was most likely to be found in the sediments. The initial phase was tomore » conduct a sediment survey of the river to determine the spatial distribution of sediment types and the suitability of the benthos for the proposed methodologies. The second phase was to combine innovative screening-level investigative methodologies as well as sediment chemical and physical analyses into one survey of the benthos and sediments of the Gunpowder River. This phase used the Microtox luminescent bioassay and Daphnia magna IQ Toxicity Test, Surface and Profile Image (SPI) photography, analysis of sediment physical characteristics, and limited chemical analysis to identify locations that warrant a more focused investigation.« less

Indigenous people's detection of rapid ecological change.

PubMed

Aswani, Shankar; Lauer, Matthew

2014-06-01

When sudden catastrophic events occur, it becomes critical for coastal communities to detect and respond to environmental transformations because failure to do so may undermine overall ecosystem resilience and threaten people's livelihoods. We therefore asked how capable of detecting rapid ecological change following massive environmental disruptions local, indigenous people are. We assessed the direction and periodicity of experimental learning of people in the Western Solomon Islands after a tsunami in 2007. We compared the results of marine science surveys with local ecological knowledge of the benthos across 3 affected villages and 3 periods before and after the tsunami. We sought to determine how people recognize biophysical changes in the environment before and after catastrophic events such as earthquakes and tsunamis and whether people have the ability to detect ecological changes over short time scales or need longer time scales to recognize changes. Indigenous people were able to detect changes in the benthos over time. Detection levels differed between marine science surveys and local ecological knowledge sources over time, but overall patterns of statistically significant detection of change were evident for various habitats. Our findings have implications for marine conservation, coastal management policies, and disaster-relief efforts because when people are able to detect ecological changes, this, in turn, affects how they exploit and manage their marine resources. © 2014 Society for Conservation Biology.

Trophic interactions of fish communities at midwater depths enhance long-term carbon storage and benthic production on continental slopes.

PubMed

Trueman, C N; Johnston, G; O'Hea, B; MacKenzie, K M

2014-07-22

Biological transfer of nutrients and materials between linked ecosystems influences global carbon budgets and ecosystem structure and function. Identifying the organisms or functional groups that are responsible for nutrient transfer, and quantifying their influence on ecosystem structure and carbon capture is an essential step for informed management of ecosystems in physically distant, but ecologically linked areas. Here, we combine natural abundance stable isotope tracers and survey data to show that mid-water and bentho-pelagic-feeding demersal fishes play an important role in the ocean carbon cycle, bypassing the detrital particle flux and transferring carbon to deep long-term storage. Global peaks in biomass and diversity of fishes at mid-slope depths are explained by competitive release of the demersal fish predators of mid-water organisms, which in turn support benthic fish production. Over 50% of the biomass of the demersal fish community at depths between 500 and 1800 m is supported by biological rather than detrital nutrient flux processes, and we estimate that bentho-pelagic fishes from the UK-Irish continental slope capture and store a volume of carbon equivalent to over 1 million tonnes of CO2 every year. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Age accuracy and resolution of Quaternary corals used as proxies for sea level

NASA Astrophysics Data System (ADS)

Edinger, E. N.; Burr, G. S.; Pandolfi, J. M.; Ortiz, J. C.

2007-01-01

The accuracy of global eustatic sea level curves measured from raised Quaternary reefs, using radiometric ages of corals at known heights, may be limited by time-averaging, which affects the variation in coral age at a given height. Time-averaging was assessed in uplifted Holocene reef sequences from the Huon Peninsula, Papua New Guinea, using radiocarbon dating of coral skeletons in both horizontal transects and vertical sequences. Calibrated 2σ age ranges varied from 800 to 1060 years along horizontal transects, but weighted mean ages calculated from 15-18 dates per horizon were accurate to a resolution within 154-214 yr. Approximately 40% of the variability in age estimate resulted from internal variability inherent to 14C estimates, and 60% was due to time-averaging. The accuracy of age estimates of sea level change in studies using single dated corals as proxies for sea level is probably within 1000 yr of actual age, but can be resolved to ≤ 250 yr if supported by dates from analysis of a statistical population of corals at each stratigraphic interval. The range of time-averaging among reef corals was much less than that for shelly benthos. Ecological time-averaging dominated over sedimentological time averaging for reef corals, opposite to patterns reported from shelly benthos in siliciclastic environments.

Great III - Ecological and Habitat Characterization. Primary Document.

DTIC Science & Technology

1982-05-01

and Cumins , 1978 2ilsesoff, 1975 Holsinger, 1972 1168e, A .. 1976 Schuster and Etnier, 1978 Lippeom and Moran, 1974 Mackie et al., 1960 Mansueti ad... stresses . The reverse is indicated by low diversity and evenness values. For the benthos, two types of diversity and evenness values were calculated. Because...tolerant of environmental stress and often proliferate in areas receiving heavy organic inputs (bewage, for example). L Uruina 3~t reuatl found- in shallow

Simulation Modeling of Zooplankton and Benthos in Reservoirs: Documentation and Development of Model Constructs.

DTIC Science & Technology

1980-03-01

weeks at temperatures of 150 C or higher. Geller noted, "The physiological adaptability of Daphnia to environmental temperature can be fully realized...served in other animals such as the nematode Plectus palustris (Duncan et al. 1974), the gastropod Goniobasis clavaeformis (Elwood and Goldstein 1975...the gastropod Goniobasis clavaeformis A/G remained constant between 118 100 and 20°C (Elwood and Goldstein 1975). Assimilation efficiency also was

Between-Habitat Variation of Benthic Cover, Reef Fish Assemblage and Feeding Pressure on the Benthos at the Only Atoll in South Atlantic: Rocas Atoll, NE Brazil

PubMed Central

Longo, G. O.; Morais, R. A.; Martins, C. D. L.; Mendes, T. C.; Aued, A. W.; Cândido, D. V.; de Oliveira, J. C.; Nunes, L. T.; Fontoura, L.; Sissini, M. N.; Teschima, M. M.; Silva, M. B.; Ramlov, F.; Gouvea, L. P.; Ferreira, C. E. L.; Segal, B.; Horta, P. A.; Floeter, S. R.

2015-01-01

The Southwestern Atlantic harbors unique and relatively understudied reef systems, including the only atoll in South Atlantic: Rocas atoll. Located 230 km off the NE Brazilian coast, Rocas is formed by coralline red algae and vermetid mollusks, and is potentially one of the most “pristine” areas in Southwestern Atlantic. We provide the first comprehensive and integrative description of the fish and benthic communities inhabiting different shallow reef habitats of Rocas. We studied two contrasting tide pool habitats: open pools, which communicate with the open ocean even during low tides, thus more exposed to wave action; and closed pools, which remain isolated during low tide and are comparatively less exposed. Reef fish assemblages, benthic cover, algal turfs and fish feeding pressure on the benthos remarkably varied between open and closed pools. The planktivore Thalassoma noronhanum was the most abundant fish species in both habitats. In terms of biomass, the lemon shark Negaprion brevirostris and the omnivore Melichtys niger were dominant in open pools, while herbivorous fishes (mainly Acanthurus spp.) prevailed in closed pools. Overall benthic cover was dominated by algal turfs, composed of articulated calcareous algae in open pools and non-calcified algae in closed pools. Feeding pressure was dominated by acanthurids and was 10-fold lower in open pools than in closed pools. Besides different wave exposure conditions, such pattern could also be related to the presence of sharks in open pools, prompting herbivorous fish to feed more in closed pools. This might indirectly affect the structure of reef fish assemblages and benthic communities. The macroalgae Digenea simplex, which is uncommon in closed pools and abundant in the reef flat, was highly preferred in herbivory assays, indicating that herbivory by fishes might be shaping this distribution pattern. The variations in benthic and reef fish communities, and feeding pressure on the benthos between open and closed pools suggest that the dynamics in open pools is mostly driven by physical factors and the tolerance of organisms to harsh conditions, while in closed pools direct and indirect effects of species interactions also play an important role. Understanding the mechanisms shaping biological communities and how they scale-up to ecosystem functioning is particularly important on isolated near-pristine systems where natural processes can still be studied under limited human impact. PMID:26061735

Between-Habitat Variation of Benthic Cover, Reef Fish Assemblage and Feeding Pressure on the Benthos at the Only Atoll in South Atlantic: Rocas Atoll, NE Brazil.

PubMed

Longo, G O; Morais, R A; Martins, C D L; Mendes, T C; Aued, A W; Cândido, D V; de Oliveira, J C; Nunes, L T; Fontoura, L; Sissini, M N; Teschima, M M; Silva, M B; Ramlov, F; Gouvea, L P; Ferreira, C E L; Segal, B; Horta, P A; Floeter, S R

2015-01-01

The Southwestern Atlantic harbors unique and relatively understudied reef systems, including the only atoll in South Atlantic: Rocas atoll. Located 230 km off the NE Brazilian coast, Rocas is formed by coralline red algae and vermetid mollusks, and is potentially one of the most "pristine" areas in Southwestern Atlantic. We provide the first comprehensive and integrative description of the fish and benthic communities inhabiting different shallow reef habitats of Rocas. We studied two contrasting tide pool habitats: open pools, which communicate with the open ocean even during low tides, thus more exposed to wave action; and closed pools, which remain isolated during low tide and are comparatively less exposed. Reef fish assemblages, benthic cover, algal turfs and fish feeding pressure on the benthos remarkably varied between open and closed pools. The planktivore Thalassoma noronhanum was the most abundant fish species in both habitats. In terms of biomass, the lemon shark Negaprion brevirostris and the omnivore Melichtys niger were dominant in open pools, while herbivorous fishes (mainly Acanthurus spp.) prevailed in closed pools. Overall benthic cover was dominated by algal turfs, composed of articulated calcareous algae in open pools and non-calcified algae in closed pools. Feeding pressure was dominated by acanthurids and was 10-fold lower in open pools than in closed pools. Besides different wave exposure conditions, such pattern could also be related to the presence of sharks in open pools, prompting herbivorous fish to feed more in closed pools. This might indirectly affect the structure of reef fish assemblages and benthic communities. The macroalgae Digenea simplex, which is uncommon in closed pools and abundant in the reef flat, was highly preferred in herbivory assays, indicating that herbivory by fishes might be shaping this distribution pattern. The variations in benthic and reef fish communities, and feeding pressure on the benthos between open and closed pools suggest that the dynamics in open pools is mostly driven by physical factors and the tolerance of organisms to harsh conditions, while in closed pools direct and indirect effects of species interactions also play an important role. Understanding the mechanisms shaping biological communities and how they scale-up to ecosystem functioning is particularly important on isolated near-pristine systems where natural processes can still be studied under limited human impact.

Yamaguchia toyensis n. sp., n. gen. (Annelida, Clitellata, Lumbriculidae) from profundal lake habitat in Japan

USGS Publications Warehouse

Fend, S.V.; Ohtaka, A.

2004-01-01

Yamaguchia toyensis n. sp., n. gen. is described from an oligotrophic caldera lake, Lake Toya, Hokkaido, Japan. Although the taxonomic affinities are unknown, the genus differs from all other Lumbriculidae in having the combination of testes and atria in X, a single, prosoporous male funnel per atrium, and spermathecae in XI. Unlike other Japanese lakes that have thus far been surveyed, Lake Toya supports abundant populations of lumbriculids in the profundal benthos.

Influence of environmental properties on macrobenthos in the northwest Indian shelf.

PubMed

Jayaraj, K A; Jayalakshmi, K V; Saraladevi, K

2007-04-01

The paper deals with the standing stock of macrobenthic infauna and associated environmental factors influencing the benthic community in the shelf region of the northwest Indian coast. The data were collected onboard FORV Sagar Sampada during the winter monsoon (January-February, 2003) to understand the community structure and the factors influencing the benthic distribution. The environmental parameters, sediment characteristics and macrobenthic infauna were collected at 26 stations distributed in the depths between 30 and 200 m extending from Mormugao to Porbander. Total benthic abundance was high in lower depths (50-75 m), and low values noticed at 30 m depth contour was peculiar. Polychaetes were the dominant group and were more abundant in shallow and middle depths with moderate organic matter, clay and relatively high dissolved oxygen. On the other hand crustaceans and molluscs were more abundant in deeper areas having sandy sediment and low temperature. High richness and diversity of whole benthic groups observed in deeper depths counter balanced the opposite trend shown by polychaete species. Generally benthos preferred medium grain sized texture with low organic matter and high organic matter had an adverse effect especially on filter feeders. Deposit feeding polychaetes dominated in shallow depths while carnivore species in the middle depths. Ecologically, benthos were controlled by a combination of factors such as temperature, salinity, dissolved oxygen, sand and organic matter and no single factor could be considered as an ecological master factor.

Abundant box jellyfish, Chironex sp. (Cnidaria: Cubozoa: Chirodropidae), discovered at depths of over 50 m on western Australian coastal reefs.

PubMed

Keesing, John K; Strzelecki, Joanna; Stowar, Marcus; Wakeford, Mary; Miller, Karen J; Gershwin, Lisa-Ann; Liu, Dongyan

2016-02-29

Box jellyfish cause human fatalities and have a life cycle and habit associated with shallow waters (<5 m) in mangrove creeks, coastal beaches, embayments. In north-western Australia, tow video and epibenthic sled surveys discovered large numbers (64 in a 1500 m tow or 0.05 m(-2)) of Chironex sp. very near to the benthos (<50 cm) at depths of 39-56 m. This is the first record of a population of box jellyfish closely associated with the benthos at such depths. Chironex were not widespread, occurring only in 2 of 33 tow videos and 3 of 41 epibenthic sleds spread over 2000 km(2). All Chironex filmed or captured were on low to medium relief reefs with rich filter feeder communities. None were on soft sediment habitat despite these habitats comprising 49% of all sites. The importance of the reef habitat to Chironex remains unclear. Being associated with filter feeder communities might represent a hazard, and other studies have shown C. fleckeri avoid habitats which represent a risk of entanglement of their tentacles. Most of our observations were made during the period of lowest tidal current flow in the morning. This may represent a period favourable for active hunting for prey close to the seabed.

Parasite transfer from crustacean to fish hosts in the Lübeck Bight, SW Baltic Sea

NASA Astrophysics Data System (ADS)

Zander, C. D.; Groenewold, S.; Strohbach, U.

1994-03-01

Four helminth parasites out of 19 species found in the Lübeck Bight, Baltic Sea, were chosen for investigations on the transfer from invertebrate to small-sized fish hosts: larvae of the tapeworms Schistocephalus sp. and Bothriocephalus sp. (Cestoda) living in planktonic copepods as primary hosts; Podocotyle atomon (Digenea) and Hysterothylacium sp. (Nematoda) were found in benthic crustaceans, especially Gammarus spp. These hosts were the prey of 3 gobiid fishes, Gobiusculus flavescens (feeding mainly on plankton), Pomatoschistus minutus (preferring benthos), and P. pictus (feeding more on plankton than benthos). Because the fishes selected smaller sizes of crustaceans, they ingested all stages of the copepods but only the smaller-sized groups of gammarids which were often less infested by parasites. In order to evaluate the probability for a fish to be parasitized by a helminth, an infestation potential index (IP) was calculated. Podocotyle atomon and Hysterothylacium sp. revealed an IP which was far lower in gobies than expected when the prevalences of the previous hosts were taken into consideration. The IP of tapeworm larvae was mainly influenced by the feeding pressure of the gobiid predators, which might change with developmental stage and season. It is concluded that parasite transfer to the next host decreases when sizes of prey and predator differ only moderately. This mechanism can reduce the numbers of parasites transferred to less suitable or wrong hosts.

Climate change and glacier retreat drive shifts in an Antarctic benthic ecosystem.

PubMed

Sahade, Ricardo; Lagger, Cristian; Torre, Luciana; Momo, Fernando; Monien, Patrick; Schloss, Irene; Barnes, David K A; Servetto, Natalia; Tarantelli, Soledad; Tatián, Marcos; Zamboni, Nadia; Abele, Doris

2015-11-01

The Antarctic Peninsula (AP) is one of the three places on Earth that registered the most intense warming in the last 50 years, almost five times the global mean. This warming has strongly affected the cryosphere, causing the largest ice-shelf collapses ever observed and the retreat of 87% of glaciers. Ecosystem responses, although increasingly predicted, have been mainly reported for pelagic systems. However, and despite most Antarctic species being benthic, responses in the Antarctic benthos have been detected in only a few species, and major effects at assemblage level are unknown. This is probably due to the scarcity of baselines against which to assess change. We performed repeat surveys of coastal benthos in 1994, 1998, and 2010, analyzing community structure and environmental variables at King George Island, Antarctica. We report a marked shift in an Antarctic benthic community that can be linked to ongoing climate change. However, rather than temperature as the primary factor, we highlight the resulting increased sediment runoff, triggered by glacier retreat, as the potential causal factor. The sudden shift from a "filter feeders-ascidian domination" to a "mixed assemblage" suggests that thresholds (for example, of tolerable sedimentation) and alternative equilibrium states, depending on the reversibility of the changes, could be possible traits of this ecosystem. Sedimentation processes will be increasing under the current scenario of glacier retreat, and attention needs to be paid to its effects along the AP.

Biological and related chemical research concerning subseabed disposal of high level nuclear waste

NASA Astrophysics Data System (ADS)

Mullin, M. M.; Gomez, L. S.

1981-10-01

This report contains: recommendations (research on radionuclide movement processes, research on radionuclide transport processes, administration and policy); abstracts of plenary talks (Large-Scale Distributions of Deep-Sea Benthic Organisms, Transfer Processes Between Water Column and Benthos, Particle Reworking and Biogeochemistry of Sediments, and radioecological Aspects of Deep-Sea Waste Disposal of Radionuclides. Summaries of subgroup discussions (geochemistry and microbiology, benthic biology, pelagic biology, radioecology); and appendices (model of physical biological transfers, and participants and institutional affiliations) are also presented.

West Hackberry Strategic Petroleum Reserve site brine-disposal monitoring, Year I report. Volume III. Biological oceanography. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeRouen, L.R.; Hann, R.W.; Casserly, D.M.

1983-02-01

The Department of Energy's Strategic Petroleum Reserve Program began discharging brine into the Gulf of Mexico from its West Hackberry site near Cameron, Louisiana in May 1981. The brine originates from underground salt domes being leached with water from the Intracoastal Waterway, making available vast underground storage caverns for crude oil. The effects of brine discharge on aquatic organisms are presented in this volume. The topics covered are: benthos; nekton; phytoplankton; zooplankton; and data management.

An Integrated Approach to Understand Relationships Between Shallow Water Benthic Community Structure and Ecosystem Function

DTIC Science & Technology

2008-11-01

water, sediment, and benthos along a gradient of disturbance intensity: Adaptive responses of the sediment feeders. Archives of Hydrobiology 127...0.13 8 Mollusca: Gastropoda Acetocina canaliculata 0.38 0.26 8 Mollusca: Gastropoda Acteon punctostriatus 0.13 0.13 8 Mollusca: Gastropoda Gastropod sp... Gastropod sp. 3 0.13 0.13 8 Mollusca: Gastropoda Gastropoda 0.38 0.26 8 Mollusca: Gastropoda Skeneopsis planorbis 0.13 0.13 8 Nemertea Nemertean sp. 1

Elucidating Small-Scale Animal-Fluid Interactions in the Deep Sea

NASA Astrophysics Data System (ADS)

Katija, K.; Sherman, A.; Graves, D.; Kecy, C. D.; Klimov, D.; Robison, B. H.

2016-02-01

The midwater region of the ocean (below the euphotic zone and above the benthos) is one of the largest ecosystems on our planet, yet remains one of the least explored. Little-known marine organisms that inhabit midwater have developed life strategies that contribute to their evolutionary success, and understanding interactions with their physical, fluid environment will shed light on these strategies. Although significant advances in underwater vehicle technologies have improved access to midwater, small-scale, in situ fluid mechanics measurement methods that seek to quantify the interactions that midwater organisms have with their physical environment are lacking. Here we present DeepPIV, an instrumentation package affixed to remotely operated vehicles that quantifies fluid motions from the surface of the ocean down to 4000 m depths. Utilizing ambient suspended particulate, fluid-structure interactions can be evaluated on a range of marine organisms in midwater and on the benthos. As a proof of concept for DeepPIV, we targeted giant larvaceans (Bathochordaeus stygias) in Monterey Bay that create mucus houses to filter food. Once mucus houses become clogged, they are abandoned by the larvacean, and are left to sink to the ocean bottom; in Monterey Bay, sinking mucus houses contribute to nearly a third of the particulate on the ocean bottom. Little is known about the structure of these mucus houses and the function they play in selectively filtering particles. Using DeepPIV, we reveal the complex structures and flows generated within larvacean mucus houses, which are used to ultimately elucidate how these structures function.

Persistent impacts to the deep soft-bottom benthos one year after the Deepwater Horizon event.

PubMed

Montagna, Paul A; Baguley, Jeffrey G; Cooksey, Cynthia; Hyland, Jeffrey L

2017-03-01

In fall 2010, several months after the Deepwater Horizon blowout was capped, zones of moderate and severe impacts to deep-sea, soft-bottom benthos were identified that together extended over an area of 172 km 2 . A subset of stations sampled in 2010 was resampled in May and June 2011, 10 to 11 months after the event, to determine whether the identified adverse effects were persisting. The design compared 20 stations from the combined moderate and severe impact zone to 12 stations in the reference zone that were sampled in both years. There were no statistically significant differences in contaminant concentrations between the impact and nonimpact zones from 2010 to 2011, which indicates contaminants persisted after 1 y. Whereas there were some signs of recovery in 2011 (particularly for the meiofauna abundance and diversity), there was evidence of persistent, statistically significant impacts to both macrofauna and meiofauna community structure. Macrofaunal taxa richness and diversity in 2011 were still 22.8% and 35.9% less, respectively, in the entire impact zone than in the surrounding nonimpact area, and meiofaunal richness was 28.5% less in the entire impact zone than in the surrounding area. The persistence of significant biodiversity losses and community structure change nearly 1 y after the wellhead was capped indicates that full recovery had yet to have occurred in 2011. Integr Environ Assess Manag 2017;13:342-351. © 2016 SETAC. © 2016 SETAC.

Abyssal near-bottom dispersal stages of benthic invertebrates in the Clarion-Clipperton polymetallic nodule province

NASA Astrophysics Data System (ADS)

Kersten, Oliver; Smith, Craig R.; Vetter, Eric W.

2017-09-01

Growing interest in polymetallic nodule mining has intensified the need to characterize the abundance, community structure and vertical flux of meroplankton in the Clarion-Clipperton Zone (CCZ) to facilitate the estimation of larval supply and potential connectivity of benthic populations. These ecological parameters are essential to predict recolonization processes following the expected large-scale, high intensity disturbances associated with nodule extraction. Here, we present the first description of the composition, abundance, temporal variability, and mesoscale distribution of dispersing stages of the benthos in two study areas in the eastern CCZ. Samples from free-vehicle plankton pumps showed little variation in meroplankton diversity and abundance over scales of 30-100 km for time scales of days to weeks. However, sediment-trap samples revealed high temporal variability in vertical flux over weeks to months. Larval abundances and fluxes measured in the abyssal CCZ are 1-2 orders of magnitude lower than observed at deep-sea ridge and hydrothermal-vent habitats. We found significantly higher downward larval fluxes at 11 m above the bottom (mab) than at 146 mab, indicating accumulation or retention of meroplankton within the Benthic Boundary Layer (BBL). The high abundance of meroplankton in the BBL emphasizes its importance to dispersing stages and suggests that the creation of large sediment plumes in the BBL during nodule mining could compromise the dispersal and recruitment abilities of the abyssal benthos, potentially slowing rates and altering patterns of benthic community recovery following mining disturbance.

Trophic look at soft-bottom communities - Short-term effects of trawling cessation on benthos

NASA Astrophysics Data System (ADS)

Dannheim, Jennifer; Brey, Thomas; Schröder, Alexander; Mintenbeck, Katja; Knust, Rainer; Arntz, Wolf E.

2014-01-01

The trophic structure of the German Bight soft-bottom benthic community was evaluated for potential changes after cessation of bottom trawling. Species were collected with van-Veen grabs and beam trawls. Trophic position (i.e. nitrogen stable isotope ratios, δ15N) and energy flow (i.e. species metabolism approximated by body mass scaled abundance) of dominant species were compared in trawled areas and an area protected from fisheries for 14 months in order to detect trawling cessation effects by trophic characteristics. At the community level, energy flow was lower in the protected area, but we were unable to detect significant changes in trophic position. At the species level energy flow in the protected area was lower for predating/scavenging species but higher for interface feeders. Species trophic positions of small predators/scavengers were lower and of deposit feeders higher in the protected area. Major reasons for trophic changes after trawling cessation may be the absence of artificial and additional food sources from trawling likely to attract predators and scavengers, and the absence of physical sediment disturbance impacting settlement/survival of less mobile species and causing a gradual shift in food availability and quality. Our results provide evidence that species or community energy flow is a good indicator to detect trawling induced energy-flow alterations in the benthic system, and that in particular species trophic properties are suitable to capture subtle and short-term changes in the benthos following trawling cessation.

Managing mangroves with benthic biodiversity in mind: Moving beyond roving banditry

NASA Astrophysics Data System (ADS)

Ellison, Aaron M.

2008-02-01

This review addresses mangrove management activities in the broader context of the diversity of the mangrove benthos. Goals for mangrove ecosystem management include silviculture, aquaculture, or 'ecosystem services' such as coastal protection. Silvicultural management of mangroves generally neglects the benthos, although benthic invertebrates may affect tree establishment and growth, and community composition of benthic invertebrates may be a reliable indicator of the state of managed mangrove forests. Similarly, mangrove aquaculture focuses on particular species with little attention paid either to impacts on other trophic levels or to feedbacks with the trees. Exploitation of mangrove-associated prawns, crabs, and molluscs has a total economic value > US $4 billion per year. These aquaculture operations still rely on wild-collected stock; world-wide patterns of exploitation fit the well-known process of 'roving banditry', where mobile agents move from location to location, rapidly exploiting and depleting local resources before moving on to other, as-yet unprotected grounds. Collection of brood stock and fishing for other external inputs required by aquaculture (e.g., 'trash fish') removes intermediate trophic levels from marine food webs, may destabilize them, and lead to secondary extinctions of higher-order predators. Increased attention being paid to the role of mangroves in coastal protection following the 2004 Indian Ocean tsunami provides an opportunity to reassess the relative merits of management focused on short-term economic gains. Managing for ecosystem services may ultimately preserve benthic biodiversity in mangrove ecosystems.

Late Paleocene-middle Eocene benthic foraminifera on a Pacific seamount (Allison Guyot, ODP Site 865): Greenhouse climate and superimposed hyperthermal events

NASA Astrophysics Data System (ADS)

Arreguín-Rodríguez, Gabriela J.; Alegret, Laia; Thomas, Ellen

2016-03-01

We investigated the response of late Paleocene-middle Eocene (~60-37.5 Ma) benthic foraminiferal assemblages to long-term climate change and hyperthermal events including the Paleocene-Eocene Thermal Maximum (PETM) at Ocean Drilling Program (ODP) Site 865 on Allison Guyot, a seamount in the Mid-Pacific Mountains. Seamounts are isolated deep-sea environments where enhanced current systems interrupt bentho-pelagic coupling, and fossil assemblages from such settings have been little evaluated. Assemblages at Site 865 are diverse and dominated by cylindrical calcareous taxa with complex apertures, an extinct group which probably lived infaunally. Dominance of an infaunal morphogroup is unexpected in a highly oligotrophic setting, but these forms may have been shallow infaunal suspension feeders, which were ecologically successful on the current-swept seamount. The magnitude of the PETM extinction at Site 865 was similar to other sites globally, but lower diversity postextinction faunas at this location were affected by ocean acidification as well as changes in current regime, which might have led to increased nutrient supply through trophic focusing. A minor hyperthermal saw less severe effects of changes in current regime, with no evidence for carbonate dissolution. Although the relative abundance of infaunal benthic foraminifera has been used as a proxy for surface productivity through bentho-pelagic coupling, we argue that this proxy can be used only in the absence of changes in carbonate saturation and current-driven biophysical linking.

[The marine coastal water monitoring program of the Italian Ministry of the Environment].

PubMed

Di Girolamo, Irene

2003-01-01

The Ministry of the Environment carries out marine and coastal monitoring programs with the collaboration of the coastal Regions. The program in progress (2001-2003), on the basis of results of the previous one, has identified 73 particulary significant areas (57 critical areas and 16 control areas). The program investigates several parameters on water, plancton, sediments, mollusks and benthos with analyses fortnightly, six-monthly and annual. The main aim of these three year monitoring programs is to assess the quality of national marine ecosystem.

Large-Scale Operations Management Test of Use of the White Amur for Control of Problem Aquatic Plants; Report 1: Baseline Studies. Volume III. The Plankton and Benthos of Lake Conway, Florida.

DTIC Science & Technology

1979-05-01

Monthly monitoring of the phytoplankton , periphyton , zooplankton, and benthic invertebrates of Lake Conway, Florida, indicates that no serious water...macrophytes. The phytoplankton community is dominated by green algae (Chlorophyta) during most of the year, with the exception of summer and early fall when...destratification and associated nutrient regeneration from the hypolimnion. Production of periphyton is highest in summer and fall and lowest in winter. Blue-greens

DeepPIV: Measuring in situ Biological-Fluid Interactions from the Surface to Benthos

NASA Astrophysics Data System (ADS)

Katija, K.; Sherman, A.; Graves, D.; Kecy, C. D.; Klimov, D.; Robison, B. H.

2015-12-01

The midwater region of the ocean (below the euphotic zone and above the benthos) is one of the largest ecosystems on our planet, yet it remains one of the least explored. Little known marine organisms that inhabit midwater have developed strategies for swimming and feeding that ultimately contributes to their evolutionary success, and may inspire engineering solutions for societally relevant challenges. Fluid mechanics governs the interactions that midwater organisms have with their physical environment, but limited access to midwater depths and lack of non-invasive methods to measure in situ small-scale fluid motions prevent these interactions from being better understood. Significant advances in underwater vehicle technologies have only recently improved access to midwater. Unfortunately, in situ small-scale fluid mechanics measurement methods are still lacking in the oceanographic community. Here we present DeepPIV, an instrumentation package that can be affixed to remotely operated underwater vehicles that quantifies small-scale fluid motions from the surface of the ocean down to 4000 m depths. Utilizing ambient, suspended particulate in the coastal regions of Monterey Bay, fluid-structure interactions are evaluated on a range of marine organisms in midwater. Initial science targets include larvaceans, biological equivalents of flapping flexible foils, that create mucus houses to filter food. Little is known about the structure of these mucus houses and the function they play in selectively filtering particles, and these dynamics can serve as particle-mucus models for human health. Using DeepPIV, we reveal the complex structures and flows generated within larvacean mucus houses, and elucidate how these structures function.

The Roles of Sea-Ice, Light and Sedimentation in Structuring Shallow Antarctic Benthic Communities

PubMed Central

Clark, Graeme F.; Stark, Jonathan S.; Palmer, Anne S.; Riddle, Martin J.; Johnston, Emma L.

2017-01-01

On polar coasts, seasonal sea-ice duration strongly influences shallow marine environments by affecting environmental conditions, such as light, sedimentation, and physical disturbance. Sea-ice dynamics are changing in response to climate, but there is limited understanding of how this might affect shallow marine environments and benthos. Here we present a unique set of physical and biological data from a single region of Antarctic coast, and use it to gain insights into factors shaping polar benthic communities. At sites encompassing a gradient of sea-ice duration, we measured temporal and spatial variation in light and sedimentation and hard-substrate communities at different depths and substrate orientations. Biological trends were highly correlated with sea-ice duration, and appear to be driven by opposing gradients in light and sedimentation. As sea-ice duration decreased, there was increased light and reduced sedimentation, and concurrent shifts in community structure from invertebrate to algal dominance. Trends were strongest on shallower, horizontal surfaces, which are most exposed to light and sedimentation. Depth and substrate orientation appear to mediate exposure of benthos to these factors, thereby tempering effects of sea-ice and increasing biological heterogeneity. However, while light and sedimentation both varied spatially with sea-ice, their dynamics differed temporally. Light was sensitive to the site-specific date of sea-ice breakout, whereas sedimentation fluctuated at a regional scale coincident with the summer phytoplankton bloom. Sea-ice duration is clearly the overarching force structuring these shallow Antarctic benthic communities, but direct effects are imposed via light and sedimentation, and mediated by habitat characteristics. PMID:28076438

The Roles of Sea-Ice, Light and Sedimentation in Structuring Shallow Antarctic Benthic Communities.

PubMed

Clark, Graeme F; Stark, Jonathan S; Palmer, Anne S; Riddle, Martin J; Johnston, Emma L

2017-01-01

On polar coasts, seasonal sea-ice duration strongly influences shallow marine environments by affecting environmental conditions, such as light, sedimentation, and physical disturbance. Sea-ice dynamics are changing in response to climate, but there is limited understanding of how this might affect shallow marine environments and benthos. Here we present a unique set of physical and biological data from a single region of Antarctic coast, and use it to gain insights into factors shaping polar benthic communities. At sites encompassing a gradient of sea-ice duration, we measured temporal and spatial variation in light and sedimentation and hard-substrate communities at different depths and substrate orientations. Biological trends were highly correlated with sea-ice duration, and appear to be driven by opposing gradients in light and sedimentation. As sea-ice duration decreased, there was increased light and reduced sedimentation, and concurrent shifts in community structure from invertebrate to algal dominance. Trends were strongest on shallower, horizontal surfaces, which are most exposed to light and sedimentation. Depth and substrate orientation appear to mediate exposure of benthos to these factors, thereby tempering effects of sea-ice and increasing biological heterogeneity. However, while light and sedimentation both varied spatially with sea-ice, their dynamics differed temporally. Light was sensitive to the site-specific date of sea-ice breakout, whereas sedimentation fluctuated at a regional scale coincident with the summer phytoplankton bloom. Sea-ice duration is clearly the overarching force structuring these shallow Antarctic benthic communities, but direct effects are imposed via light and sedimentation, and mediated by habitat characteristics.

Assessing condition of macroinvertebrate communities and bed sediment toxicity in the Rochester Embayment Area of Concern, New York, USA

USGS Publications Warehouse

Duffy, Brian; George, Scott D.; Baldigo, Barry P.; Smith, Alexander J.

2017-01-01

The United States and Canada agreed to restore the chemical, physical, and biological integrity of the Great Lakes ecosystem under the first Great Lakes Water Quality Agreement in 1972. The lowest reach of the Genesee River and the Rochester Embayment on Lake Ontario between Bogus Point and Nine Mile Point, including Braddock Bay, were designated as an Area of Concern (AOC) due to effects of contaminated sediments and physical disturbance on several beneficial uses. Following sediment remedial efforts and with conditions improving in the AOC, the present study was conducted to reevaluate the status of the benthic macroinvertebrate (benthos) beneficial use impairment (BUI). Benthic macroinvertebrate community assessments and 10-day Chironomus dilutus bioassays were used to test the hypotheses that sediments within the AOC were no more toxic than sediments from surrounding reference areas. The study was separated into three discrete systems (Genesee River, Lake Ontario, and Braddock Bay) and non-parametric analyses determined that a multimetric index of benthic macroinvertebrate community integrity was significantly higher at AOC sites compared to reference sites on the Genesee River and in Braddock Bay while AOC and reference sites on Lake Ontario did not differ significantly. Survival and growth of C. dilutus were also similar between AOC and reference sites for each system with the exception of significantly higher growth at reference sites on Lake Ontario. Results generally indicated that the condition of benthos and toxicity of sediment of the Rochester Embayment AOC are similar to or better than that in the surrounding area.

Characterizing the role benthos plays in large coastal seas and estuaries: A modular approach

USGS Publications Warehouse

Tenore, K.R.; Zajac, R.N.; Terwin, J.; Andrade, F.; Blanton, J.; Boynton, W.; Carey, D.; Diaz, R.; Holland, Austin F.; Lopez-Jamar, E.; Montagna, P.; Nichols, F.; Rosenberg, R.; Queiroga, H.; Sprung, M.; Whitlatch, R.B.

2006-01-01

Ecologists studying coastal and estuarine benthic communities have long taken a macroecological view, by relating benthic community patterns to environmental factors across several spatial scales. Although many general ecological patterns have been established, often a significant amount of the spatial and temporal variation in soft-sediment communities within and among systems remains unexplained. Here we propose a framework that may aid in unraveling the complex influence of environmental factors associated with the different components of coastal systems (i.e. the terrestrial and benthic landscapes, and the hydrological seascape) on benthic communities, and use this information to assess the role played by benthos in coastal ecosystems. A primary component of the approach is the recognition of system modules (e.g. marshes, dendritic systems, tidal rivers, enclosed basins, open bays, lagoons). The modules may differentially interact with key forcing functions (e.g. temperature, salinity, currents) that influence system processes and in turn benthic responses and functions. Modules may also constrain benthic characteristics and related processes within certain ecological boundaries and help explain their overall spatio-temporal variation. We present an example of how benthic community characteristics are related to the modular structure of 14 coastal seas and estuaries, and show that benthic functional group composition is significantly related to the modular structure of these systems. We also propose a framework for exploring the role of benthic communities in coastal systems using this modular approach and offer predictions of how benthic communities may vary depending on the modular composition and characteristics of a coastal system. ?? 2006 Elsevier B.V. All rights reserved.

The evolution of jaw protrusion mechanics is tightly coupled to bentho-pelagic divergence in damselfishes (Pomacentridae).

PubMed

Cooper, W James; Carter, Casey B; Conith, Andrew J; Rice, Aaron N; Westneat, Mark W

2017-02-15

Most species-rich lineages of aquatic organisms have undergone divergence between forms that feed from the substrate (benthic feeding) and forms that feed from the water column (pelagic feeding). Changes in trophic niche are frequently accompanied by changes in skull mechanics, and multiple fish lineages have evolved highly specialized biomechanical configurations that allow them to protrude their upper jaws toward the prey during feeding. Damselfishes (family Pomacentridae) are an example of a species-rich lineage with multiple trophic morphologies and feeding ecologies. We sought to determine whether bentho-pelagic divergence in the damselfishes is tightly coupled to changes in jaw protrusion ability. Using high-speed video recordings and kinematic analysis, we examined feeding performance in 10 species that include three examples of convergence on herbivory, three examples of convergence on omnivory and two examples of convergence on planktivory. We also utilized morphometrics to characterize the feeding morphology of an additional 40 species that represent all 29 damselfish genera. Comparative phylogenetic analyses were then used to examine the evolution of trophic morphology and biomechanical performance. We find that pelagic-feeding damselfishes (planktivores) are strongly differentiated from extensively benthic-feeding species (omnivores and herbivores) by their jaw protrusion ability, upper jaw morphology and the functional integration of upper jaw protrusion with lower jaw abduction. Most aspects of cranial form and function that separate these two ecological groups have evolved in correlation with each other and the evolution of the functional morphology of feeding in damselfishes has involved repeated convergence in form, function and ecology. © 2017. Published by The Company of Biologists Ltd.

Hydrographic and Ecological Effects of Enlargement of the Chesapeake and Delaware Canal. Appendix IV. Benthos of Delaware Waters in and Near C and D Canal.

DTIC Science & Technology

1973-09-01

stations in the last three sampling periods of this project to supplement the regular I infaunal sampling schedule. Salinity , dissolved oxygen, water...summer. Salinity was quite variable but tended to be * highest in late summer (range 0.1 — 10 O/~~~~~~ )~~~ Dissolved oxygen, being an inverse...function of both salinity and temperature, dropped in summer. Concentrations in the 2—3 mg/l range were not unusual. The physical data collected in

Interpreting benthic oxygen levels in mudrocks: A new approach

NASA Astrophysics Data System (ADS)

Wignall, Paul B.; Myers, Keith J.

1988-05-01

Quantified paleoecology and gamma-ray spectrometry have been applied in the analysis of the Kimmeridge Clay, a highly organic-rich British Jurassic mudrock. Decreasing benthic oxygen trends are reflected in decreasing species richness and dominance-diversity values. Similarly, the degree of fragmentation of the benthos reflects the benthic energy levels and covaries with benthic oxygen. The calculation of authigenic uranium values from data gathered by gamma-ray spectrometry shows enrichment in more oxygen-deficient environments. The good correlation between the independently derived paleoecological and authigenic U data indicates the importance of these techniques in environmental analysis of marine petroleum source rocks.

Drift of Zooplankton, Benthos, and Larval Fish and Distribution of Macrophytes and Larval Fish during Winter and Summer, 1985.

DTIC Science & Technology

1986-01-01

of the net ring to crossrods by slipping the crossrods through the rope which secured the net to the ring (Fig. 3). Each net was clipped to the center...and the base was wedged among the rocks thereby anchoring the sample device securely even in rough weather conditions. At the top of each support rod...samples i with a 0.5-m diameter, 363-gm mesh net. The net was secured to the bridge with rope and sampled ə m below the surface for 10 min. Surface

Influence of calcium on the distribution of the pheasant in North America

USGS Publications Warehouse

Dale, F.H.

2000-01-01

Rapid Bioassessment Protocols (RBP) and the Sediment Quality Triad (SQT) were used to evaluate the biological effects of a municipal waste-water treatment facility (WWTF) on a small southern stream. During major storm events, raw sewage from the WWTF is released directly into the stream. The headwaters of the stream also receive non-point surface runoff from urban areas. RBP analyses, which included benthos, fish and habitat evaluations, and SQT, including the benthos (from the RBP), contaminant analyses (metals, organochlorine pesticides, PCBs and PAHs) andl toxicity tests of depositional sediment (exposures of Hyalella azteca to solid-phase sediment and pore water) were conducted at five sites on the stream (two upstream of the WWTF and three downstream). The stream has been channelized throughout its entire length, resulting in high, unstable banks, degraded stream channel, and unstable substratum. RBP analyses indicated that the two stations upstream of the WWTF were degraded due to poor physical habitat quality (unstable benthic substratum and lack of fish habitat). The SQT also showed reduced habitat quality at the two stations above the WWTF, but the cause was attributed to high concentrations of PAHs and metals in the sediments. The increased discharge and stabilized base flow provided by the WWTF improved habitat quality downnstream, although conditions were still impaired due to the habitat alteration. Though the causes of degradation were attributed to different factors (physical habitat vs. contamination), there was close concordance between the RBP and SQT in identifying the degraded sites in this stream. The combination of these two procedures provides a robust examination of environmental quality utilizing the weight of evidence approach.

Indices of benthic community tolerance in contaminated Great Lakes sediments: Relations with sediment contaminant concentrations, sediment toxicity, and the sediment quality triad

USGS Publications Warehouse

Wildhaber, M.L.; Schmitt, C.J.

1998-01-01

We evaluated the toxic-units model developed by Wildhaber and Schmitt (1996) as a predictor of indices of mean tolerance to pollution (i.e., Lenat, 1993; Hilsenhoff, 1987) and other benthic community indices from Great Lakes sediments containing complex mixtures of environmental contaminants (e.g., polychlorinated biphenyls – PCBs, polycyclic aromatic hydrocarbons – PAHs, pesticides, chlorinated dioxins, and metals). Sediment toxic units were defined as the ratio of the estimated pore-water concentration of a contaminant to its chronic toxicity as estimated by U.S. Environmental Protection Agency Ambient Water Quality Criteria (AWQC) or other applicable standard. The total hazard of a sediment to aquatic life was assessed by summing toxic units for all contaminants quantified. Among the benthic community metrics evaluated, total toxic units were most closely correlated with Lenat's (1993) and Hilsenhoff's (1987) indices of community tolerance (TL and TH, respectively); toxic units accounted for 42% TL and 53% TH of variability in community tolerance as measured by Ponar grabs. In contrast, taxonomic richness and Shannon-Wiener diversity were not correlated (P > 0.05) with toxic units. Substitution of order- or family-level identifications for lowest possible (mostly genus- or species-) level identifications in the calculation of TL and TH indices weakened the relationships with toxic units. Tolerance values based on order- and family-level identifications of benthos for artificial substrate samples were more strongly correlated with toxic units than tolerance values for benthos from Ponar grabs. The ability of the toxic-units model to predict the other two components (i.e., laboratory-measured sediment toxicity and benthic community composition) of the Sediment Quality Triad (SQT) may obviate the need for the SQT in some situations.

Bathymetric patterns of body size: implications for deep-sea biodiversity

NASA Astrophysics Data System (ADS)

Rex, Michael A.; Etter, Ron J.

1998-01-01

The evolution of body size is a problem of fundamental interest, and one that has an important bearing on community structure and conservation of biodiversity. The most obvious and pervasive characteristic of the deep-sea benthos is the small size of most species. The numerous attempts to document and explain geographic patterns of body size in the deep-sea benthos have focused on variation among species or whole faunal components, and have led to conflicting and contradictory results. It is important to recognize that studying size as an adaptation to the deep-sea environment should include analyses within species using measures of size that are standardized to common growth stages. An analysis within eight species of deep-sea benthic gastropods presented here reveals a clear trend for size to increase with depth in both larval and adult shells. An ANCOVA with multiple comparison tests showed that, in general, size-depth relationships for both adult and larval shells are more pronounced in the bathyal region than in the abyss. This result reinforces the notion that steepness of the bathymetric selective gradient decreases with depth, and that the bathyal region is an evolutionary hotspot that promotes diversification. Bathymetric size clines in gastropods support neither the predictions of optimality models nor earlier arguments based on tradeoffs among scaling factors. As in other environments, body size is inversely related to both abundance and species density. We suggest that the decrease in nutrient input with depth may select for larger size because of its metabolic or competitive advantages, and that larger size plays a role in limiting diversity. Adaptation is an important evolutionary driving force of biological diversity, and geographic patterns of body size could help unify ecological and historical theories of deep-sea biodiversity.

An adaptive environmental effects monitoring framework for assessing the influences of liquid effluents on benthos, water and sediments in aquatic receiving environments.

PubMed

Somers, Keith M; Kilgour, Bruce W; Munkittrick, Kelly R; Arciszewski, Tim J

2018-05-16

Environmental effects monitoring (EEM) has been traditionally used to evaluate the effects of existing facilities discharging liquid effluents into natural receiving waters in Canada. EEM also has the potential to provide feedback to an ongoing project in an adaptive management context, and can inform the design of future projects. EEM, consequently, can and should also be used to test the predictions of effects related to new projects. Despite EEM's potential for widespread applicability, challenges related to the effective implementation of EEM include the use of appropriate study designs, as well as to the adoption of tiers for increasing or decreasing monitoring intensity. Herein we describe a template for designing and implementing a six-tiered EEM program that utilizes information from the project-planning and pre-development baseline data collection stages to build on forecasts from the initial environmental impact assessment project-design stage, and feeds into an adaptive management process. Movement between the six EEM tiers is based on the exceedance of Baseline Monitoring Triggers, Forecast Triggers and Management Triggers at various stages in the EEM process. To distinguish these types of triggers, we review the historical development of numeric and narrative triggers as applied to chemical (water and sediment) and biological (plankton, benthos, fish) endpoints. We also provide an overview of historical study design issues and discuss how the six EEM tiers and associated triggers influence the temporal-spatial experimental design options and how the information gained through EEM could be used in an adaptive management context. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

The biodiversity of the deep Southern Ocean benthos.

PubMed

Brandt, A; De Broyer, C; De Mesel, I; Ellingsen, K E; Gooday, A J; Hilbig, B; Linse, K; Thomson, M R A; Tyler, P A

2007-01-29

Our knowledge of the biodiversity of the Southern Ocean (SO) deep benthos is scarce. In this review, we describe the general biodiversity patterns of meio-, macro- and megafaunal taxa, based on historical and recent expeditions, and against the background of the geological events and phylogenetic relationships that have influenced the biodiversity and evolution of the investigated taxa. The relationship of the fauna to environmental parameters, such as water depth, sediment type, food availability and carbonate solubility, as well as species interrelationships, probably have shaped present-day biodiversity patterns as much as evolution. However, different taxa exhibit different large-scale biodiversity and biogeographic patterns. Moreover, there is rarely any clear relationship of biodiversity pattern with depth, latitude or environmental parameters, such as sediment composition or grain size. Similarities and differences between the SO biodiversity and biodiversity of global oceans are outlined. The high percentage (often more than 90%) of new species in almost all taxa, as well as the high degree of endemism of many groups, may reflect undersampling of the area, and it is likely to decrease as more information is gathered about SO deep-sea biodiversity by future expeditions. Indeed, among certain taxa such as the Foraminifera, close links at the species level are already apparent between deep Weddell Sea faunas and those from similar depths in the North Atlantic and Arctic. With regard to the vertical zonation from the shelf edge into deep water, biodiversity patterns among some taxa in the SO might differ from those in other deep-sea areas, due to the deep Antarctic shelf and the evolution of eurybathy in many species, as well as to deep-water production that can fuel the SO deep sea with freshly produced organic matter derived not only from phytoplankton, but also from ice algae.

The biodiversity of the deep Southern Ocean benthos

PubMed Central

Brandt, A; De Broyer, C; De Mesel, I; Ellingsen, K.E; Gooday, A.J; Hilbig, B; Linse, K; Thomson, M.R.A; Tyler, P.A

2006-01-01

Our knowledge of the biodiversity of the Southern Ocean (SO) deep benthos is scarce. In this review, we describe the general biodiversity patterns of meio-, macro- and megafaunal taxa, based on historical and recent expeditions, and against the background of the geological events and phylogenetic relationships that have influenced the biodiversity and evolution of the investigated taxa. The relationship of the fauna to environmental parameters, such as water depth, sediment type, food availability and carbonate solubility, as well as species interrelationships, probably have shaped present-day biodiversity patterns as much as evolution. However, different taxa exhibit different large-scale biodiversity and biogeographic patterns. Moreover, there is rarely any clear relationship of biodiversity pattern with depth, latitude or environmental parameters, such as sediment composition or grain size. Similarities and differences between the SO biodiversity and biodiversity of global oceans are outlined. The high percentage (often more than 90%) of new species in almost all taxa, as well as the high degree of endemism of many groups, may reflect undersampling of the area, and it is likely to decrease as more information is gathered about SO deep-sea biodiversity by future expeditions. Indeed, among certain taxa such as the Foraminifera, close links at the species level are already apparent between deep Weddell Sea faunas and those from similar depths in the North Atlantic and Arctic. With regard to the vertical zonation from the shelf edge into deep water, biodiversity patterns among some taxa in the SO might differ from those in other deep-sea areas, due to the deep Antarctic shelf and the evolution of eurybathy in many species, as well as to deep-water production that can fuel the SO deep sea with freshly produced organic matter derived not only from phytoplankton, but also from ice algae. PMID:17405207

Long-term benthic monitoring studies in the freshwater portion of the Potomac River: 1983 to 1985, cumulative report. Volume 1. Text

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shaughnessy, A.T.; Holland, A.F.

1989-12-01

The report summarizes data from the first three years of a long-term monitoring program to establish baseline conditions in benthic communities on the upper Potomac River. Major sources of variation were considered in an effort to characterize the effect of two power plants on distribution and abundance of the benthos. Distinct changes occurred in benthic communities in the vicinity of power plant discharges. These included decreased abundances of dominant species and reduced occurrences of rare species. Impacts associated with power plants were most severe during summer months and during low flow years.

Long-term benthic monitoring studies in the freshwater portion of the Potomac River: 1983 to 1985, cumulative report. Volume 2. Appendices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shaughnessy, A.T.; Holland, A.F.

1989-12-01

The report summarizes data from the first three years of a long-term monitoring program to establish baseline conditions in benthic communities on the upper Potomac River. Major sources of variation were considered in an effort to characterize the effect of two power plants on distribution and abundance of the benthos. Distinct changes occurred in benthic communities in the vicinity of power plant discharges. These included decreased abundances of dominant species and reduced occurrences of rare species. Impacts associated with power plants were most severe during summer months and during low flow years.

Assessment of dreissenid biodeposits as a potential food resource for invasive Asian carp

USGS Publications Warehouse

Anderson, Karl R.; Chapman, Duane C.; Hayer, Cari-Ann

2016-01-01

Silver carp (Hypophthalmichthys molitrix) and bighead carp (H. nobilis) are poised to invade the Laurentian Great Lakes. Zebra mussels (Dreissena polymorpha) and quagga mussels (D. rostriformis bugensis) have shifted nutrient pathways towards the benthos, partly through deposition of feces and rejected food particles called biodeposits. When biodeposit material was fed to bighead and silver carp, they fed on the material, but on average lost weight. Energy density between fed and unfed fish did not differ, but a few individual fish did gain weight on the biodeposits diet. Our results demonstrate that biodeposits might be considered a supplemental food for bigheaded carps.

Large-Scale Operations Management Test of Use of the White Amur for Control of Problem Aquatic Plants. Report 2. First Year Poststocking Results. Volume III. The Plankton and Benthos of Lake Conway, Florida,

DTIC Science & Technology

1981-11-01

AD-AI09 516 FLORIDA UNIV GAINESVILLE DEPT OF ENVIRONMENTAL ENGIN--ETC F/G 6/6 LARGE-SCALE OPERATIONS MANAGEMENT TEST OF USE OF THE,WHITE AMUR--ETC(U... OPERATIONS MANAGEMENT TEST OF USE OF THE WHITE AMUR FOR CONTROL OF PROBLEM AQUATIC PLANTS Report I: Baseline Studies Volume I: The Aquatic Macropyes of...COVERED LARGE-SCALE OPERATIONS MANAGEMENT TEST OF USE OF Report 2 of a series THE WHITE AMUR FOR CONTROL OF PROBLEM AQUATIC (In 7 volumes) PLANTS

Carbohydrates as indicators of biogeochemical processes

NASA Astrophysics Data System (ADS)

Lazareva, E. V.; Romankevich, E. A.

2012-05-01

A method is presented to study the carbohydrate composition of marine objects involved into sedimento- and diagenesis (plankton, particulate matter, benthos, and bottom sediments). The analysis of the carbohydrates is based upon the consecutive separation of their fractions with different solvents (water, alkali, and acid). The ratio of the carbohydrate fractions allows one to evaluate the lability of the carbohydrate complex. It is also usable as an indicator of the biogeochemical processes in the ocean, as well of the genesis and the degree of conversion of organic matter in the bottom sediments and nodules. The similarity in the monosaccharide composition is shown for dissolved organic matter and aqueous and alkaline fractions of seston and particulate matter.

Trophic structure on the West Antarctic Peninsula shelf: Detritivory and benthic inertia revealed by δ 13C and δ 15N analysis

NASA Astrophysics Data System (ADS)

Mincks, Sarah L.; Smith, Craig R.; Jeffreys, Rachel M.; Sumida, Paulo Y. G.

2008-11-01

Summer bloom-derived phytodetritus settles rapidly to the seafloor on the West Antarctic Peninsula (WAP) continental shelf, where it appears to degrade relatively slowly, forming a sediment "food bank" for benthic detritivores. We used stable carbon and nitrogen isotopes to examine sources and sinks of particulate organic material (POM) reaching the WAP shelf benthos (550-625 m depths), and to explore trophic linkages among the most abundant benthic megafauna. We measured δ 13C and δ 15N values in major megafaunal taxa ( n=26) and potential food sources, including suspended and sinking POM, ice algae, sediment organic carbon, phytodetritus, and macrofaunal polychaetes. The range in δ 13C values (>14‰) of suspended POM was considerably broader than in sedimentary POC, where little temporal variability in stable isotope signatures was observed. While benthic megafauna also exhibited a broad range of δ 13C values, organic carbon entering the benthic food web appeared to be derived primarily from phytoplankton production, with little input from ice algae. One group of organisms, primarily deposit-feeders, appeared to rely on fresh phytodetritus recovered from the sediments, and sediment organic material that had been reworked by sediment microbes. A second group of animals, including many mobile invertebrate and fish predators, appeared to utilize epibenthic or pelagic food resources such as zooplankton. One surface-deposit-feeding holothurian ( Protelpidia murrayi) exhibited seasonal variability in stable isotope values of body tissue, while other surface- and subsurface-deposit-feeders showed no evidence of seasonal variability in food source or trophic position. Detritus from phytoplankton blooms appears to be the primary source of organic material for the detritivorous benthos; however, seasonal variability in the supply of this material is not mirrored in the sediments, and only to a minor degree in the benthic fauna. This pattern suggests substantial inertia in benthic-pelagic coupling, whereby the sediment ecosystem integrates long-term variability in production processes in the water column above.

Bentho-pelagic divergence of cichlid feeding architecture was prodigious and consistent during multiple adaptive radiations within African rift-lakes.

PubMed

Cooper, W James; Parsons, Kevin; McIntyre, Alyssa; Kern, Brittany; McGee-Moore, Alana; Albertson, R Craig

2010-03-08

How particular changes in functional morphology can repeatedly promote ecological diversification is an active area of evolutionary investigation. The African rift-lake cichlids offer a calibrated time series of the most dramatic adaptive radiations of vertebrate trophic morphology yet described, and the replicate nature of these events provides a unique opportunity to test whether common changes in functional morphology have repeatedly facilitated their ecological success. Specimens from 87 genera of cichlid fishes endemic to Lakes Tanganyka, Malawi and Victoria were dissected in order to examine the functional morphology of cichlid feeding. We quantified shape using geometric morphometrics and compared patterns of morphological diversity using a series of analytical tests. The primary axes of divergence were conserved among all three radiations, and the most prevalent changes involved the size of the preorbital region of the skull. Even the fishes from the youngest of these lakes (Victoria), which exhibit the lowest amount of skull shape disparity, have undergone extensive preorbital evolution relative to other craniofacial traits. Such changes have large effects on feeding biomechanics, and can promote expansion into a wide array of niches along a bentho-pelagic ecomorphological axis. Here we show that specific changes in trophic anatomy have evolved repeatedly in the African rift lakes, and our results suggest that simple morphological alterations that have large ecological consequences are likely to constitute critical components of adaptive radiations in functional morphology. Such shifts may precede more complex shape changes as lineages diversify into unoccupied niches. The data presented here, combined with observations of other fish lineages, suggest that the preorbital region represents an evolutionary module that can respond quickly to natural selection when fishes colonize new lakes. Characterizing the changes in cichlid trophic morphology that have contributed to their extraordinary adaptive radiations has broad evolutionary implications, and such studies are necessary for directing future investigations into the proximate mechanisms that have shaped these spectacular phenomena.

Spatial and overwinter changes in clam populations of San Pablo Bay, a semiarid estuary with highly variable freshwater inflow

USGS Publications Warehouse

Poulton, V.K.; Lovvorn, J.R.; Takekawa, John Y.

2004-01-01

In many estuaries worldwide, climate trends together with human diversion of fresh water have dramatically impacted the benthos. Such impacts have sometimes been complicated by exotic species, whose invasion and persistence can be mediated by wide variations in freshwater inflow. Monitoring such changes usually involves periodic samples at a few sites; but sampling that does not recognize variation at a range of spatial and seasonal scales may not reveal important benthic trends. San Pablo Bay, in northern San Francisco Bay, has extreme fluctuations in freshwater inflow. This bay also experienced a major benthic change with introduction of the Asian clam (Potamocorbula amurensis) in 1986. This species initially displaced the former community, but later appeared to vary in abundance depending on site and freshwater inflow. To investigate such patterns and provide guidelines for research and monitoring, we took 1746 core samples at six sites around San Pablo Bay from 19 October to 17 December 1999 and from 6 March to 19 April 2000. Most biomass consisted of the clams P. amurensis,Macoma balthica and Mya arenaria. Potamocorbula amurensis dominated the benthos at most sites in the fall and recruited a new cohort during winter, while there was weak recruitment in M. balthica and none in M. arenaria. At most but not all sites, densities of P. amurensis and M. arenaria declined dramatically over winter while M. balthica declined only slightly. The dominant clams had patch diameters >5 m at most but not all sites, and some showed inconsistent patch structure at scales of 100–1400 m. In this semiarid estuary with highly variable freshwater inflow, samples for research and monitoring should include multiple sites and seasons, and samples within sites should be ≥5 m apart to account for between-patch variation. Species abundance in winter 1999–2000 appeared to be affected by high freshwater inflows in 1997–1999, while spatial patterns were probably most affected by post-settlement dispersal and mortality.

Influence of Benthic Macrofauna as a Spatial Structuring Agent for Juvenile Haddock (Melanogrammus aeglefinus) on the Eastern Scotian Shelf, Atlantic Canada.

PubMed

Rincón, Beatriz; Kenchington, Ellen L

2016-01-01

We examined the habitat of juvenile haddock on the eastern Scotian Shelf (off Nova Scotia, Canada) in relation to grab-sampled benthic macrofaunal invertebrate species assemblages in order to determine whether there were significant differences in benthic macrofauna between areas of historically persistent high and low juvenile haddock abundance. Our analyses were conducted over two spatial scales in each of two years: among banks (Emerald, Western and Sable Island), approximately 60 km distant from each other, and between areas of high and low juvenile haddock abundance at distances of 10 to 30 km-all in an area that had not experienced groundfishing in the decade prior to sampling. We also examined fine-scale (10s of metres) within-site variability in the macrofauna and used surficial sediment characteristics, along with hydrographic variables, to identify environmental correlates. PERMANOVA identified statistically significant differences in biomass, density and composition of the benthos associated with juvenile haddock abundance; however it was difficult to determine whether the results had biological relevance. Post hoc tests showed that these differences occurred only on Sable Island Bank where both fish and benthos may have been independently responding to sediment type which was most different there (100% sand in the area of low haddock abundance vs. 22% gravel in the area of high haddock abundance). In total, 383 benthic taxa representing 13 phyla were identified. Annelida was the most specious phylum (36.29% of taxa, representing 33 families), followed by Arthropoda (with Crustaceans, mostly Amphipoda, accounting for 25.07% of the total number of taxa). The strongest pattern in the macrofauna was expressed at the largest scale, between banks, accounting for approximately 25% of the variation in the data. Emerald Bank, deeper, warmer and saltier than the Western and Sable Island Banks, had a distinctive fauna.

Influence of Benthic Macrofauna as a Spatial Structuring Agent for Juvenile Haddock (Melanogrammus aeglefinus) on the Eastern Scotian Shelf, Atlantic Canada

PubMed Central

2016-01-01

We examined the habitat of juvenile haddock on the eastern Scotian Shelf (off Nova Scotia, Canada) in relation to grab-sampled benthic macrofaunal invertebrate species assemblages in order to determine whether there were significant differences in benthic macrofauna between areas of historically persistent high and low juvenile haddock abundance. Our analyses were conducted over two spatial scales in each of two years: among banks (Emerald, Western and Sable Island), approximately 60 km distant from each other, and between areas of high and low juvenile haddock abundance at distances of 10 to 30 km–all in an area that had not experienced groundfishing in the decade prior to sampling. We also examined fine-scale (10s of metres) within-site variability in the macrofauna and used surficial sediment characteristics, along with hydrographic variables, to identify environmental correlates. PERMANOVA identified statistically significant differences in biomass, density and composition of the benthos associated with juvenile haddock abundance; however it was difficult to determine whether the results had biological relevance. Post hoc tests showed that these differences occurred only on Sable Island Bank where both fish and benthos may have been independently responding to sediment type which was most different there (100% sand in the area of low haddock abundance vs. 22% gravel in the area of high haddock abundance). In total, 383 benthic taxa representing 13 phyla were identified. Annelida was the most specious phylum (36.29% of taxa, representing 33 families), followed by Arthropoda (with Crustaceans, mostly Amphipoda, accounting for 25.07% of the total number of taxa). The strongest pattern in the macrofauna was expressed at the largest scale, between banks, accounting for approximately 25% of the variation in the data. Emerald Bank, deeper, warmer and saltier than the Western and Sable Island Banks, had a distinctive fauna. PMID:27649419

Relationships between depth and δ15N of Arctic benthos vary among regions and trophic functional groups

NASA Astrophysics Data System (ADS)

Stasko, Ashley D.; Bluhm, Bodil A.; Reist, James D.; Swanson, Heidi; Power, Michael

2018-05-01

Stable isotope ratios of nitrogen (δ15N) of benthic primary consumers are often significantly related to water depth. This relationship is commonly attributed to preferential uptake of 14N from sinking particulate organic matter (POM) by microbes, and suggests that relationships between δ15N and water depth may be affected by local POM sources and flux dynamics. We examined the relationships between δ15N and water depth (20-500 m) for six trophic functional groups using a mixed effects modelling approach, and compared relationships between two contiguous Arctic marine ecosystems with different POM sources and sinking export dynamics: the Canadian Beaufort Sea and Amundsen Gulf. We demonstrate for the first time in the Arctic that δ15N values of mobile epifaunal carnivores increased as a function of depth when considered separately from benthopelagic and infaunal carnivores, which contrarily did not exhibit increasing δ15N with depth. The δ15N of suspension/filter feeders, infaunal deposit feeders and bulk sediment also increased with water depth, and the slopes of the relationships were steeper in the Amundsen Gulf than in the Beaufort Sea. We propose that regional differences in slopes reflect differences in POM sources exported to the benthos. In the Beaufort Sea, terrestrial POM discharged from the Mackenzie River quantitatively dominates the sedimentary organic matter across the continental shelf and slope, dampening change in δ15N of benthic POM with depth. In the Amundsen Gulf, we attribute a faster rate of change in δ15N of POM with increasing depth to larger contributions of marine-derived POM to the benthic sedimentary pool, which had likely undergone extensive biological transformation in the productive offshore pelagic zone. Differences in POM input regimes among regions should be considered when comparing food webs using stable isotopes, as such differences may impact the rate at which consumer δ15N changes with depth.

Export of Algal Communities from Land Fast Arctic Sea Ice Influenced by Overlying Snow Depth and Episodic Rain Events

NASA Astrophysics Data System (ADS)

Neuer, S.; Juhl, A. R.; Aumack, C.; McHugh, C.; Wolverton, M. A.; Kinzler, K.

2016-02-01

Sea ice algal communities dominate primary production of the coastal Arctic Ocean in spring. As the sea ice bloom terminates, algae are released from the ice into the underlying, nutrient-rich waters, potentially seeding blooms and feeding higher trophic levels in the water column and benthos. We studied the sea ice community including export events over four consecutive field seasons (2011-2014) during the spring ice algae bloom in land-fast ice near Barrow, Alaska, allowing us to investigate both seasonal and interannual differences. Within each year, we observed a delay in algal export from ice in areas covered by thicker snow compared to areas with thinner snow coverage. Variability in snow cover therefore resulted in a prolonged supply of organic matter to the underlying water column. Earlier export in 2012 was followed by a shift in the diatom community within the ice from pennates to centrics. During an unusual warm period in early May 2014, precipitation falling as rain substantially decreased the snow cover thickness (from snow depth > 20 cm down to 0-2 cm). After the early snowmelt, algae were rapidly lost from the sea ice, and a subsequent bloom of taxonomically-distinct, under-ice phytoplankton developed a few days later. The typical immured sea ice diatoms never recovered in terms of biomass, though pennate diatoms (predominantly Nitzschia frigida) did regrow to some extent near the ice bottom. Sinking rates of the under-ice phytoplankton were much more variable than those of ice algae particles, which would potentially impact residence time in the water column, and fluxes to the benthos. Thus, the early melt episode, triggered by rain, transitioned directly into the seasonal melt and the release of biomass from the ice, shifting production from sea ice to the water column, with as-of-yet unknown consequences for the springtime Arctic food web.

Herbivory drives large-scale spatial variation in reef fish trophic interactions

PubMed Central

Longo, Guilherme O; Ferreira, Carlos Eduardo L; Floeter, Sergio R

2014-01-01

Trophic interactions play a critical role in the structure and function of ecosystems. Given the widespread loss of biodiversity due to anthropogenic activities, understanding how trophic interactions respond to natural gradients (e.g., abiotic conditions, species richness) through large-scale comparisons can provide a broader understanding of their importance in changing ecosystems and support informed conservation actions. We explored large-scale variation in reef fish trophic interactions, encompassing tropical and subtropical reefs with different abiotic conditions and trophic structure of reef fish community. Reef fish feeding pressure on the benthos was determined combining bite rates on the substrate and the individual biomass per unit of time and area, using video recordings in three sites between latitudes 17°S and 27°S on the Brazilian Coast. Total feeding pressure decreased 10-fold and the composition of functional groups and species shifted from the northern to the southernmost sites. Both patterns were driven by the decline in the feeding pressure of roving herbivores, particularly scrapers, while the feeding pressure of invertebrate feeders and omnivores remained similar. The differential contribution to the feeding pressure across trophic categories, with roving herbivores being more important in the northernmost and southeastern reefs, determined changes in the intensity and composition of fish feeding pressure on the benthos among sites. It also determined the distribution of trophic interactions across different trophic categories, altering the evenness of interactions. Feeding pressure was more evenly distributed at the southernmost than in the southeastern and northernmost sites, where it was dominated by few herbivores. Species and functional groups that performed higher feeding pressure than predicted by their biomass were identified as critical for their potential to remove benthic biomass. Fishing pressure unlikely drove the large-scale pattern; however, it affected the contribution of some groups on a local scale (e.g., large-bodied parrotfish) highlighting the need to incorporate critical functions into conservation strategies. PMID:25512851

Prediction, scenarios and insight: The uses of an end-to-end model

NASA Astrophysics Data System (ADS)

Steele, John H.

2012-09-01

A major function of ecosystem models is to provide extrapolations from observed data in terms of predictions or scenarios or insight. These models can be at various levels of taxonomic resolution such as total community production, abundance of functional groups, or species composition, depending on the data input as drivers. A 40-year dynamic simulation of end-to-end processes in the Georges Bank food web is used to illustrate the input/output relations and the insights gained at the three levels of food web aggregation. The focus is on the intermediate level and the longer term changes in three functional fish guilds - planktivores, benthivores and piscivores - in terms of three ecosystem-based metrics - nutrient input, relative productivity of plankton and benthos, and food intake by juvenile fish. These simulations can describe the long term constraints imposed on guild structure and productivity by energy fluxes over the 40 years but cannot explain concurrent switches in abundance of individual species within guilds. Comparing time series data for individual species with model output provides insights; but including the data in the model would confer only limited extra information. The advantages and limitations of the three levels of resolution of models in relation to ecosystem-based management are: The correlations between primary production and total yield of fish imply a “bottom-up” constraint on end-to-end energy flow through the food web that can provide predictions of such yields. Functionally defined metrics such as nutrient input, relative productivity of plankton and benthos and food intake by juvenile fish, represent bottom-up, mid-level and top-down forcing of the food web. Model scenarios using these metrics can demonstrate constraints on the productivity of these functionally defined guilds within the limits set by (1). Comparisons of guild simulations with time series of fish species provide insight into the switches in species dominance that accompany changes in guild productivity and can illuminate the top-down aspects of regime shifts.

Disturbance, colonization and development of Antarctic benthic communities.

PubMed

Barnes, David K A; Conlan, Kathleen E

2007-01-29

A decade has yielded much progress in understanding polar disturbance and community recovery-mainly through quantifying ice scour rates, other disturbance levels, larval abundance and diversity, colonization rates and response of benthos to predicted climate change. The continental shelf around Antarctica is clearly subject to massive disturbance, but remarkably across so many scales. In summer, millions of icebergs from sizes smaller than cars to larger than countries ground out and gouge the sea floor and crush the benthic communities there, while the highest wind speeds create the highest waves to pound the coast. In winter, the calm associated with the sea surface freezing creates the clearest marine water in the world. But in winter, an ice foot encases coastal life and anchor ice rips benthos from the sea floor. Over tens and hundreds of thousands of years, glaciations have done the same on continental scales-ice sheets have bulldozed the seabed and the zoobenthos to edge of shelves. We detail and rank modern disturbance levels (from most to least): ice; asteroid impacts; sediment instability; wind/wave action; pollution; UV irradiation; volcanism; trawling; non-indigenous species; freshwater inundation; and temperature stress. Benthic organisms have had to recolonize local scourings and continental shelves repeatedly, yet a decade of studies have demonstrated that they have (compared with lower latitudes) slow tempos of reproduction, colonization and growth. Despite massive disturbance levels and slow recolonization potential, the Antarctic shelf has a much richer fauna than would be expected for its area. Now, West Antarctica is among the fastest warming regions and its organisms face new rapid changes. In the next century, temperature stress and non-indigenous species will drastically rise to become dominant disturbances to the Antarctic life. Here, we describe the potential for benthic organisms to respond to disturbance, focusing particularly on what we know now that we did not a decade ago.

Disturbance, colonization and development of Antarctic benthic communities

PubMed Central

Barnes, David K.A; Conlan, Kathleen E

2006-01-01

A decade has yielded much progress in understanding polar disturbance and community recovery—mainly through quantifying ice scour rates, other disturbance levels, larval abundance and diversity, colonization rates and response of benthos to predicted climate change. The continental shelf around Antarctica is clearly subject to massive disturbance, but remarkably across so many scales. In summer, millions of icebergs from sizes smaller than cars to larger than countries ground out and gouge the sea floor and crush the benthic communities there, while the highest wind speeds create the highest waves to pound the coast. In winter, the calm associated with the sea surface freezing creates the clearest marine water in the world. But in winter, an ice foot encases coastal life and anchor ice rips benthos from the sea floor. Over tens and hundreds of thousands of years, glaciations have done the same on continental scales—ice sheets have bulldozed the seabed and the zoobenthos to edge of shelves. We detail and rank modern disturbance levels (from most to least): ice; asteroid impacts; sediment instability; wind/wave action; pollution; UV irradiation; volcanism; trawling; non-indigenous species; freshwater inundation; and temperature stress. Benthic organisms have had to recolonize local scourings and continental shelves repeatedly, yet a decade of studies have demonstrated that they have (compared with lower latitudes) slow tempos of reproduction, colonization and growth. Despite massive disturbance levels and slow recolonization potential, the Antarctic shelf has a much richer fauna than would be expected for its area. Now, West Antarctica is among the fastest warming regions and its organisms face new rapid changes. In the next century, temperature stress and non-indigenous species will drastically rise to become dominant disturbances to the Antarctic life. Here, we describe the potential for benthic organisms to respond to disturbance, focusing particularly on what we know now that we did not a decade ago. PMID:17405206

Hanna Shoal: An integrative study of a High Arctic marine ecosystem in the Chukchi Sea

NASA Astrophysics Data System (ADS)

Dunton, Kenneth H.; Grebmeier, Jacqueline M.; Trefry, John H.

2017-10-01

This second special issue on the ecosystem under the COMIDA (Chukchi Sea Offshore Monitoring in the Drilling Area) Project focuses on the productive region around Hanna Shoal, the northernmost shoal on the Chukchi shelf. Our first issue (Dunton et al., 2014) emphasized the chemical and biological characteristics of the northeastern Chukchi Sea benthos. This effort expands our studies on the unique physical oceanography of Hanna Shoal, which lies at the interface between northward flowing Pacific Water and the Arctic Ocean, to include its influence on zooplankton dynamics and higher trophic level biota. Between both studies, conducted over a 5-year period (2009-2013) and four summer cruises, COMIDA scientists from seven institutions occupied some 85 stations (Fig. 1).

DOE Office of Scientific and Technical Information (OSTI.GOV)

Green, D.J.

Mining activity in the vicinity of Lynn Lake in north-west Manitoba resulted in development of a number of tailings ponds that are potential sources of acid drainage. Observations such as the presence of dead trees in the vicinity of tailings pond dikes and a distinctive green coloration in one effluent pond raised concerns that confinement of acid drainage in the tailings area may be compromised and causing renewed detrimental impacts to the Lynn River and surrounding area. This report presents results of water quality and sediment surveys conducted in the Lynn Lake area. Parameters studied include pH, conductivity, calcium, sulfate,more » iron, nickel, zinc, copper, cyanide, and presence of benthos. Comparisons of the results are made with results from earlier surveys in order to determine temporal trends.« less

Sedimentation rates and patterns in beaver ponds in a mountain environment

NASA Astrophysics Data System (ADS)

Butler, David R.; Malanson, George P.

1995-09-01

Sediment depth was measured at several sites within each of eight beaver ponds in Glacier National Park, Montana, and sediment samples wen; collected from five of these ponds. Accumulation rates of sediments far exceeded published rates from boreal forest landscapes in eastem and central North America. Pond area strongly predicts volume of sedimentation. Textural differences illustrated spatial variations associated with position in a pond and along a pond sequence. Organic matter content was significantly higher in older ponds, and has ramifications for the development of the benthos and the long-term storage of matter in ponds. The role of beavers as biogeomorphic agents is profound, but requires further elucidation to distinguish between fluvial sediment deposition in ponds and sediment deposition associated with beaver excavational activity.

Multi-decadal synthesis of benthic pelagic coupling in the western arctic: Role of cross-shelf advective processes

NASA Astrophysics Data System (ADS)

Dunton, Kenneth H.; Goodall, Jonathan L.; Schonberg, Susan V.; Grebmeier, Jacqueline M.; Maidment, David R.

2005-12-01

Using geographic information systems (GIS) software and geostatistical techniques, we utilized three decades of water-column chlorophyll a data to examine the relative importance of autochthonous versus allochthonous sources of reduced carbon to benthic communities that occur from the northern Bering to the eastern Beaufort Sea shelf. Spatial trend analyses revealed areas of high benthic biomass (>300 g m -2) and chlorophyll (>150 mg m -2) on both the southern and northern Chukchi shelf; both areas are known as depositional centers for reduced organic matter that originates on the Bering Sea shelf and is advected northward in Anadyr and Bering shelf water masses. We found a significant correlation between biomass and chlorophyll a in the Chukchi Sea, reflective of the strong benthic-pelagic coupling in a system that is utilized heavily by benthic-feeding marine mammals. In contrast, there was no significant correlation between biomass and chlorophyll in the Beaufort Sea, which by comparison, is considerably less productive (biomass and chlorophyll, <75 g m -2 and <50 mg m -2, respectively). One notable exception is an area of relatively high biomass (50-100 g m -2) and chlorophyll (80 mg m -2) near Barter Island in the eastern Beaufort Sea. Compared to other adjacent areas in the Beaufort Sea, the chlorophyll values in the vicinity of Barter Island were considerably higher and likely reflect a long-hypothesized upwelling in that area and close coupling between the benthos and autochthonous production. In the Bering Sea, a drop in benthic biomass in 1994 compared with previous measurements (1974-1993) may support earlier observations that document a decline in biomass that began between the 1980s and 1990s in the Chirikov Basin and south of St. Lawrence Island. The results of this study indicate that the benthos is an excellent long-term indicator of both local and physical advective processes. In addition, this work provides further evidence that secondary production on arctic shelves can be significantly augmented by reduced carbon advected from highly productive adjacent shelves.

The paradox of nonmarine ichnofaunas in tidal rhythmites: Integrating sedimentologic and ichnologic data from the late Carboniferous of eastern Kansas, USA

USGS Publications Warehouse

Buatois, L.A.; Mangano, M.G.; Maples, C.G.; Lanier, Wendy E.

1997-01-01

The occurrence of trace fossil assemblages dominated by arthropod trackways and surface grazing trails within Carboniferous tidal rhythmites has puzzled sedimentologists and ichnologists, who interpreted them either as marine or nonmarine. The Virgilian (Stephanian) Tonganoxie Sandstone Member (Stranger Formation) at Buildex Quarry (eastern Kansas) consists, for the most part, of planar-laminated coarse-grained siltstones deposited on an upper tidal flat, close to or at the fluvial-estuarine transition of a macrotidal estuarine paleovalley. Recurrent thickness fluctuations demonstrate the strong influence of tidal processes and provide evidence that these deposits are tidal rhythmites, with thicker strata representing spring tides and thinner ones recording neap tides. The Buildex sequence hosts a moderately diverse ichnofauna composed of arthropod trackways (Dendroidichnites irregulare, Diplichnites gouldi, Diplopodichnus bifurcus, Kouphichnium isp., Mirandaichnium famatinense, Stiallia pilosa, Stiaria intermedia), grazing traces (Gordia indianaensis, Helminthoidichnites tenuis, Helminthopsis hieroglyphica), subsurface feeding traces (Treptichnus bifurcus, T. pollardi, irregular networks), apterygote insect resting and feeding traces (Tonganoxichnus buildexensis, T. ottawensis), fish traces (Undichna britannica, U. simplicitas), and tetrapod trackways. In contrast to trace fossil assemblages from brackish-water estuarine settings, the Buildex ichnofauna is characterized by moderate to relatively high ichnodiversity, ichnotaxa commonly present in terrestrial/freshwater environments, dominance of surface trails and absence of burrows, dominance of temporary structures produced by a mobile deposit-feeder fauna, a mixture of traces belonging to the Scoyenia and Mermia ichnofacies, moderate density of individual ichnotaxa, and absence of monospecific suites. This ichnofauna is thought to record the activity of a typical freshwater/terrestrial benthos. The presence of this mixed freshwater/terrestrial ichnofauna in tidal rhythmites is regarded as indicative of tidal flats that were developed in the most proximal zone of the inner estuary under freshwater conditions, more precisely in a zone between the maximum limit of landward tidal currents and the salinity limit further towards the sea. Although lithofacies distribution in estuarine valleys is mainly salinity-independent, the distribution of benthos is not. Accordingly, ichnologic studies have the potential to provide a high-resolution delineation of fluvio-estuarine transitions.

ATOC/Pioneer Seamount cable after 8 years on the seafloor: Observations, environmental impact

NASA Astrophysics Data System (ADS)

Kogan, Irina; Paull, Charles K.; Kuhnz, Linda A.; Burton, Erica J.; von Thun, Susan; Gary Greene, H.; Barry, James P.

2006-04-01

A study was conducted on the impacts of the presence of the Acoustic Thermometry of Ocean Climate (ATOC)/Pioneer Seamount cable on the benthos from nearshore waters adjacent to its origin at Pillar Point Air Force Station in Half Moon Bay, California to its terminus 95 km along its length on Pioneer Seamount. The coaxial Type SD cable was installed, unburied on the seafloor in 1995. Thirteen sites along the cable route were surveyed using the Monterey Bay Aquarium Research Institute (MBARI) ROVs Ventana and Tiburon equipped with cable-tracking tools. Quantitative comparisons of biological communities and seafloor features between cable and control sites were performed at nine stations. Forty-two hours of video footage and 138 push cores were collected over 15.1 km of seafloor. Approximately 12.1 km of the cable was observed (13% of the cable route). This study documents the appearance and condition of the cable and the underlying seafloor, and the effects of the cable on biological communities along its route. Limited self-burial of the cable has occurred during the 8-year deployment, particularly over the continental shelf and upper slope. Cable strumming by nearshore wave action has incised rocky siltstone outcrops. Several observations of kinks and snags in the cable on the upper slope (˜240 m depth) suggest contact with trawling gear. Few changes in the abundance or distribution of benthic fauna were detectable from video observations (epifaunal) and sediment core samples (infauna). Of 17 megafaunal groups and 19 infaunal taxa, no tests evaluating the overall effect of the cable were statistically significant. While these results indicate that the biological impacts of the cable are minor at most, three megafaunal groups exhibited cable-related changes at one or more stations. Actiniarians (sea anemones) colonized the cable when it was exposed on the seafloor, and were therefore generally more abundant on the cable than in surrounding, sediment-dominated seafloor habitats. Some fishes were also more abundant near the cable, apparently due to the higher habitat complexity provided by the cable. The study also documents general changes in the benthos across the Central California continental margin.

The structure of soft-bottom benthic communities in the vicinity of the Texas Flower Garden Banks, Gulf of Mexico

NASA Astrophysics Data System (ADS)

Yingst, Josephine Y.; Rhoads, Donald C.

1985-05-01

Biological and sedimentological samples were obtained in June 1980 from box cores taken in 100-200 m of water on sandy-mud sediments near the East and West Flower Garden Bank reefs, on the Texas-Louisiana Continental Shelf. The objective was to obtain baseline information about sedimentary parameters and organisms adjacent to the FGB environments in order to allow inferences to be made about potential effects of physical disturbance of the seafloor on the resident benthos. Most infaunal organisms are found in the upper 3-5 cm of the bottom. Permanent meiofauna dominate in both numbers and biomass. X-radiographs of sediment fabrics show all stations to be reworked by head-down deposit-feeders or errant bioturbators. Taxa responsible for this bioturbation were not quantitatively sampled. Macrofaunal densities range from 3000 to 25000 m -2 and total meiofauna from 221 to 892 × (10 cm) -2. Nematodes dominate followed in equal abundance by foraminiferans, polychaetes, and copepods. Seventy-five percent of the total sediment ATP in the top 3 cm is contributed by meiofauna. These benthic assemblages are hypothesized to represent a mixture of pioneering and high-order successional stages. Bacterial abundances are positively correlated with organic content and inversely correlated with macro- and meiofaunal densities. This inverse relationship may reflect consumer cropping intensities. Both microbial ATP and bacterial biomass are lower than reported for the Georgia Bight Shelf, Cape Blanc, West African Shelf, western coast of Norway, and Long Island Sound. Bacterial counts are lower than those recorded for the East China Sea and the Amazon River shelf. Moderate to low standing stocks of benthos, dominated by meiofaunal-sized taxa, further suggest that this area of the Gulf of Mexico is a relatively oligotrophic system for infaunal benthic consumers. Higher order successional stages are, in general, adversely affected to a greater extent than pioneering stages by physical disturbance. In the Texas-Louisiana shelf region, dilution of an already food limited system by inert barium sulphate would be expected to result in even lower standing stocks of benthic infaunal invertebrates.

Influence of seabird colonies and other environmental variables on benthic community structure, Lancaster Sound Region, Canadian Arctic

NASA Astrophysics Data System (ADS)

Bouchard Marmen, Mariève; Kenchington, Ellen; Ardyna, Mathieu; Archambault, Philippe

2017-03-01

The Canadian Arctic shelters millions of seabirds each year during the breeding season. By the excretion of important quantities of guano, seabirds locally concentrate nutrient-rich organic matter in the marine areas surrounding colonies. Seabirds, acting as biological vectors of nutrients, can markedly affect terrestrial ecosystems, but their influence on the structure of marine benthic communities is still under-studied. Sessile and long-lived megabenthic species can integrate environmental variation into marine food webs over long time frames. The objectives of this study were (1) to characterize the epifaunal and infaunal communities of the Lancaster Sound Region (LSR) and (2) to test the influence of the presence of seabird colonies and other environmental parameters on the structure of those benthic communities. Our prediction was that benthic diversity, number of taxa, total biomass of infauna and total density of epifauna and infauna, would be higher in areas with colonies present. Photos of the seafloor (data on epifauna) and grab samples (data on infauna) were taken at three control areas and at five areas near seabird colonies, within a depth range of 122 to 442 m. A database of 26 environmental parameters was built to study the environment-benthos relationships. Infauna, which was relatively uniform across the LSR, was numerically dominated by Annelida. Epifauna was much patchier, with each study area having unique epibenthic assemblages. Brittle stars were highly abundant in epifaunal communities, reaching 600 individuals per square meter. The presence of seabird colonies was not a major driver of benthic community structure in the LSR at the depths studied. Negative effects of colonies were detected on the density and number of taxa of infauna, perhaps due to top-down effects transmitted by the seabirds which feed in the water column and can directly reduce the quantity of food reaching the seabed. Sediment concentration of pigment, percent cover of gravel and boulders, depth, temperature and duration of open water explained a substantial part of the observed variation across the LSR. Food availability, as expressed by sediment pigment concentration, is a factor driving benthic communities, even if potential pathways through seabirds did not broadly affect the benthos at the point source.

Iceberg killing fields limit huge potential for benthic blue carbon in Antarctic shallows.

PubMed

Barnes, David K A

2017-07-01

Climate-forced ice losses are increasing potential for iceberg-seabed collisions, termed ice scour. At Ryder Bay, West Antarctic Peninsula (WAP) sea ice, oceanography, phytoplankton and encrusting zoobenthos have been monitored since 1998. In 2003, grids of seabed markers, covering 225 m 2 , were established, surveyed and replaced annually to measure ice scour frequency. Disturbance history has been recorded for each m 2 of seabed monitored at 5-25 m for ~13 years. Encrusting fauna, collected from impacted and nonimpacted metres each year, show coincident benthos responses in growth, mortality and mass of benthic immobilized carbon. Encrusting benthic growth was mainly determined by microalgal bloom duration; each day, nanophytoplankton exceeded 200 μg L -1 produced ~0.05 mm radial growth of bryozoans, and sea temperature >0 °C added 0.002 mm day -1 . Mortality and persistence of growth, as benthic carbon immobilization, were mainly influenced by ice scour. Nearly 30% of monitored seabed was hit each year, and just 7% of shallows were not hit. Hits in deeper water were more deadly, but less frequent, so mortality decreased with depth. Five-year recovery time doubled benthic carbon stocks. Scour-driven mortality varied annually, with two-thirds of all monitored fauna killed in a single year (2009). Reduced fast ice after 2006 ramped iceberg scouring, killing half the encrusting benthos each year in following years. Ice scour coupled with low phytoplankton biomass drove a phase shift to high mortality and depressed zoobenthic immobilized carbon stocks, which has persevered for 10 years since. Stocks of immobilized benthic carbon averaged nearly 15 g m -2 . WAP ice scouring may be recycling 80 000 tonnes of carbon yr -1 . Without scouring, such carbon would remain immobilized and the 2.3% of shelf which are shallows could be as productive as all the remaining continental shelf. The region's future, when glaciers reach grounding lines and iceberg production diminishes, is as a major global sink of carbon storage. © 2016 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

Impact Of Coral Structures On Wave Directional Spreading Across A Shallow Reef Flat - Lizard Island, Northern Great Barrier Reef

NASA Astrophysics Data System (ADS)

Leon, J. X.; Baldock, T.; Callaghan, D. P.; Hoegh-guldberg, O.; Mumby, P.; Phinn, S. R.; Roelfsema, C. M.; Saunders, M. I.

2013-12-01

Coral reef hydrodynamics operate at several and overlapping spatial-temporal scales. Waves have the most important forcing function on shallow (< 5 m) reefs as they drive most ecological and biogeochemical processes by exerting direct physical stress, directly mixing water (temperature and nutrients) and transporting sediments, nutrients and plankton. Reef flats are very effective at dissipating wave energy and providing an important ecosystem service by protecting highly valued shorelines. The effectiveness of reef flats to dissipate wave energy is related to the extreme hydraulic roughness of the benthos and substrate composition. Hydraulic roughness is usually obtained empirically from frictional-dissipation calculations, as detailed field measurements of bottom roughness (e.g. chain-method or profile gauges) is a very labour and time-consuming task. In this study we measured the impact of coral structures on wave directional spreading. Field data was collected during October 2012 across a reef flat on Lizard Island, northern Great Barrier Reef. Wave surface levels were measured using an array of self-logging pressure sensors. A rapid in situ close-range photogrammetric method was used to create a high-resolution (0.5 cm) image mosaic and digital elevation model. Individual coral heads were extracted from these datasets using geo-morphometric and object-based image analysis techniques. Wave propagation was modelled using a modified version of the SWAN model which includes the measured coral structures in 2m by 1m cells across the reef. The approach followed a cylinder drag approach, neglecting skin friction and inertial components. Testing against field data included bed skin friction. Our results show, for the first time, how the variability of the reef benthos structures affects wave dissipation across a shallow reef flat. This has important implications globally for coral reefs, due to the large extent of their area occupied by reef flats, particularly, as global-scale degradation in coral reef health is causing a lowering of reef carbonate production that might lead to a decrease in reef structure and roughness.

Baseline Assessment of Net Calcium Carbonate Accretion Rates on U.S. Pacific Reefs.

PubMed

Vargas-Ángel, Bernardo; Richards, Cristi L; Vroom, Peter S; Price, Nichole N; Schils, Tom; Young, Charles W; Smith, Jennifer; Johnson, Maggie D; Brainard, Russell E

2015-01-01

This paper presents a comprehensive quantitative baseline assessment of in situ net calcium carbonate accretion rates (g CaCO3 cm(-2) yr(-1)) of early successional recruitment communities on Calcification Accretion Unit (CAU) plates deployed on coral reefs at 78 discrete sites, across 11 islands in the central and south Pacific Oceans. Accretion rates varied substantially within and between islands, reef zones, levels of wave exposure, and island geomorphology. For forereef sites, mean accretion rates were the highest at Rose Atoll, Jarvis, and Swains Islands, and the lowest at Johnston Atoll and Tutuila. A comparison between reef zones showed higher accretion rates on forereefs compared to lagoon sites; mean accretion rates were also higher on windward than leeward sites but only for a subset of islands. High levels of spatial variability in net carbonate accretion rates reported herein draw attention to the heterogeneity of the community assemblages. Percent cover of key early successional taxa on CAU plates did not reflect that of the mature communities present on surrounding benthos, possibly due to the short deployment period (2 years) of the experimental units. Yet, net CaCO3 accretion rates were positively correlated with crustose coralline algae (CCA) percent cover on the surrounding benthos and on the CAU plates, which on average represented >70% of the accreted material. For foreeefs and lagoon sites combined CaCO3 accretion rates were statistically correlated with total alkalinity and Chlorophyll-a; a GAM analysis indicated that SiOH and Halimeda were the best predictor variables of accretion rates on lagoon sites, and total alkalinity and Chlorophyll-a for forereef sites, demonstrating the utility of CAUs as a tool to monitor changes in reef accretion rates as they relate to ocean acidification. This study underscores the pivotal role CCA play as a key benthic component and supporting actively calcifying reefs; high Mg-calcite exoskeletons makes CCA extremely susceptible changes in ocean water pH, emphasizing the far-reaching threat that ocean acidification poses to the ecological function and persistence of coral reefs worldwide.

Baseline Assessment of Net Calcium Carbonate Accretion Rates on U.S. Pacific Reefs

PubMed Central

Vargas-Ángel, Bernardo; Richards, Cristi L.; Vroom, Peter S.; Price, Nichole N.; Schils, Tom; Young, Charles W.; Smith, Jennifer; Johnson, Maggie D.; Brainard, Russell E.

2015-01-01

This paper presents a comprehensive quantitative baseline assessment of in situ net calcium carbonate accretion rates (g CaCO3 cm-2 yr-1) of early successional recruitment communities on Calcification Accretion Unit (CAU) plates deployed on coral reefs at 78 discrete sites, across 11 islands in the central and south Pacific Oceans. Accretion rates varied substantially within and between islands, reef zones, levels of wave exposure, and island geomorphology. For forereef sites, mean accretion rates were the highest at Rose Atoll, Jarvis, and Swains Islands, and the lowest at Johnston Atoll and Tutuila. A comparison between reef zones showed higher accretion rates on forereefs compared to lagoon sites; mean accretion rates were also higher on windward than leeward sites but only for a subset of islands. High levels of spatial variability in net carbonate accretion rates reported herein draw attention to the heterogeneity of the community assemblages. Percent cover of key early successional taxa on CAU plates did not reflect that of the mature communities present on surrounding benthos, possibly due to the short deployment period (2 years) of the experimental units. Yet, net CaCO3 accretion rates were positively correlated with crustose coralline algae (CCA) percent cover on the surrounding benthos and on the CAU plates, which on average represented >70% of the accreted material. For foreeefs and lagoon sites combined CaCO3 accretion rates were statistically correlated with total alkalinity and Chlorophyll-a; a GAM analysis indicated that SiOH and Halimeda were the best predictor variables of accretion rates on lagoon sites, and total alkalinity and Chlorophyll-a for forereef sites, demonstrating the utility of CAUs as a tool to monitor changes in reef accretion rates as they relate to ocean acidification. This study underscores the pivotal role CCA play as a key benthic component and supporting actively calcifying reefs; high Mg-calcite exoskeletons makes CCA extremely susceptible changes in ocean water pH, emphasizing the far-reaching threat that ocean acidification poses to the ecological function and persistence of coral reefs worldwide. PMID:26641885

Benthic communities in the deep Mediterranean Sea: exploring microbial and meiofaunal patterns in slope and basin ecosystems

NASA Astrophysics Data System (ADS)

Sevastou, K.; Lampadariou, N.; Polymenakou, P. N.; Tselepides, A.

2013-07-01

The long-held perception of the deep sea consisting of monotonous slopes and uniform oceanic basins has over the decades given way to the idea of a complex system with wide habitat heterogeneity. Under the prism of a highly diverse environment, a large dataset was used to describe and compare spatial patterns of the dominant small-size components of deep-sea benthos, metazoan meiofauna and microbes, from Mediterranean basins and slopes. A grid of 73 stations sampled at five geographical areas along the central-eastern Mediterranean Basin (central Mediterranean, northern Aegean Sea, Cretan Sea, Libyan Sea, eastern Levantine) spanning over 4 km in depth revealed a high diversity, irrespective of the benthic group or level of taxonomic analysis. A common decreasing bathymetric trend was detected for meiobenthic abundance, major taxa diversity and nematode genera richness, but no differences were found between the two habitats (basin vs slope). In contrast, microbial richness is significantly higher at the basin ecosystem and tends to increase with depth. Multivariate analyses (β- and δ-diversity and ordination analysis) complemented these results and underlined the high within-habitat variability of benthic communities. Meiofaunal communities in particular were found to change gradually and vary more towards the abyss. On the other hand, microbial communities were highly variable, even among samples of the same area, habitat and bathymetry. A significant proportion of the variation of benthic communities and their descriptors was explained by depth and proxies of food availability (sedimentary pigments and organic content), but the combination of predictor variables and the strength of the relationship varied depending on the data set used (based on type of habitat, benthic component, taxonomic level). This, along with the observed high within-habitat variability suggests that other factors, which tend to vary at local scale (hydrodynamics, substrate structure, geochemistry, food quality, etc.), may also relate to the observed benthic patterns. Overall, the results presented here suggest that differences in small-size benthos between the basin and slope habitats are neither strong nor consistent; it appears that within-habitat variability is high, differences among depth ranges are important and further investigation of possible environmental drivers of benthic patterns is needed.

A review of benthic faunal surveys in San Francisco Bay

USGS Publications Warehouse

Nichols, Frederic H.

1973-01-01

During the past 60 years, considerable effort has been expended in studies of the relations of the biotic community and physicochemical characteristics of San Francisco Bay water. In very recent years these studies have emphasized the relations between the 'state of health' of bottom-living invertebrates (the benthos) and the levels of pollutants in the bay. Benthic organisms, generally sessile, are unable to escape deleterious environmental changes, and they reflect these changes in alterations of normal species composition of assemblages and species abundance. Data that expands understanding of these relations in urbanized areas such as San Francisco Bay are critical. Because of the implications of such data in control of water quality, the U.S. Geological Survey undertook a review of the results and major conclusions of San Francisco Bay benthic surveys. The size and species composition of faunal assemblages are largely controlled by the salinity of the water, the texture of the bottom sediments, and locally by wastes discharged into the bay. Efforts to describe the structure and function of benthic communities of the bay and to quantify the effects of waste discharge on them have been hampered by inconsistent and often faulty sampling methodology and species identification. Studies made show a lack of information on the normal life processes of the organisms concerned. The diversity index (a mathematical expression of the number of kinds of organisms present at a location), commonly used to describe the 'health' of the benthic community, has been employed without regard for the need for standardizing methodology and species identifications or for understanding natural biological processes that affect such mathematical indices. There are few reliable quantitative data on the distribution of benthic organisms in San Francisco Bay with which future assessments of the 'health' of the benthic community might be compared. Methods for study of the benthos must be standardized, identifications of species verified by trained taxonomists, and new field and laboratory studies undertaken before we can expect to obtain an accurate description of the benthic fauna and its relations with the environment.

Monitoring Domoic Acid production by Solid Phase Adsorption Toxin Tracking off the Santa Cruz Municipal Warf, Santa Cruz, California

NASA Astrophysics Data System (ADS)

Nolan, M.; Ziccarelli, L.; Kudela, R. M.

2013-12-01

Certain species of the diatom genus Pseudo-nitzschia are producers of the neurotoxin, domoic acid (DA). DA is known to cause amnesic shellfish poisoning also known as domoic acid poisoning, which can lead to permanent brain damage in humans and marine mammals. DA accumulates at higher trophic levels, generally due to consumption of toxic cells or through trophic transfer, and can potentially cause death of both humans and marine wildlife. The Santa Cruz Municipal Warf experiences periodic rises in DA concentrations, which can reach toxic levels in shellfish, fish, and other marine organisms. While these increases in toxicity often occur during Pseudo-nitzschia blooms, several periods of elevated DA have occurred when diatom abundance is restricted and/or dominated by non-toxic species, and there is increasing evidence that DA dissolved in seawater may be prevalent. One theory suggests that senescent or dead Pseudo-nitzschia cells sink to the benthos while retaining their toxin and are buried in sediment following the death of a bloom. Therefore, DA may accumulate in the benthos, where it is eventually released during storms or wave and tide conditions that disturb the sediment. We sampled DA in situ using Solid Phase Adsorption Toxin Tracking (SPATT) bags SPATT uses a synthetic resin to capture dissolved DA, allowing for the determination of integrated DA concentrations at known time intervals. The alternative method is mussel biotoxin monitoring, but it is less accurate due to uncertainties in the time of DA accumulation within the mussel, and the lack of uptake of dissolved DA by the mussel. We deployed and collected SPATT off the Santa Cruz Municipal Wharf at multiple depths beginning in February 2013. We expect to see increasing DA following the death of a harmful algal bloom. Under pre-bloom conditions, little to no DA has been detected in mussels or surface SPATT, but DA from SPATT is frequently observed at depth, suggesting that the sediment is exposed to (or acts as a reservoir for) DA, and that benthic organisms are chronically exposed to DA.

Global warming enhances sulphide stress in a key seagrass species (NW Mediterranean).

PubMed

García, Rosa; Holmer, Marianne; Duarte, Carlos M; Marbà, Núria

2013-12-01

The build-up of sulphide concentrations in sediments, resulting from high inputs of organic matter and the mineralization through sulphate reduction, can be lethal to the benthos. Sulphate reduction is temperature dependent, thus global warming may contribute to even higher sulphide concentrations and benthos mortality. The seagrass Posidonia oceanica is very sensitive to sulphide stress. Hence, if concentrations build up with global warming, this key Mediterranean species could be seriously endangered. An 8-year monitoring of daily seawater temperature, the sulphur isotopic signatures of water (δ(34)S(water)), sediment (δ(34)SCRS ) and P. oceanica leaf tissue (δ(34)S(leaves)), along with total sulphur in leaves (TS(leaves)) and annual net population growth along the coast of the Balearic archipelago (Western Mediterranean) allowed us to determine if warming triggers P. oceanica sulphide stress and constrains seagrass survival. From the isotopic S signatures, we estimated sulphide intrusion into the leaves (F(sulphide)) and sulphur incorporation into the leaves from sedimentary sulphides (SS(leaves)). We observed lower δ(34)S(leaves), higher F(sulphide) and SS(leaves) coinciding with a 6-year period when two heat waves were recorded. Warming triggered sulphide stress as evidenced by the negative temperature dependence of δ(34)S(leaves) and the positive one of F(sulphide), TS(leaves) and SS(leaves). Lower P. oceanica net population growth rates were directly related to higher contents of TS(leaves). At equivalent annual maximum sea surface water temperature (SST(max)), deep meadows were less affected by sulphide intrusion than shallow ones. Thus, water depth acts as a protecting mechanism against sulphide intrusion. However, water depth would be insufficient to buffer seagrass sulphide stress triggered by Mediterranean seawater summer temperatures projected for the end of the 21st century even under scenarios of moderate greenhouse gas emissions, A1B. Mediterranean warming, therefore, is expected to enhance P. oceanica sulphide stress, and thus compromise the survival of this key habitat along its entire depth distribution range. © 2013 John Wiley & Sons Ltd.

Exceptional vertebrate biotas from the Triassic of China, and the expansion of marine ecosystems after the Permo-Triassic mass extinction

NASA Astrophysics Data System (ADS)

Benton, Michael J.; Zhang, Qiyue; Hu, Shixue; Chen, Zhong-Qiang; Wen, Wen; Liu, Jun; Huang, Jinyuan; Zhou, Changyong; Xie, Tao; Tong, Jinnan; Choo, Brian

2013-10-01

The Triassic was a time of turmoil, as life recovered from the most devastating of all mass extinctions, the Permo-Triassic event 252 million years ago. The Triassic marine rock succession of southwest China provides unique documentation of the recovery of marine life through a series of well dated, exceptionally preserved fossil assemblages in the Daye, Guanling, Zhuganpo, and Xiaowa formations. New work shows the richness of the faunas of fishes and reptiles, and that recovery of vertebrate faunas was delayed by harsh environmental conditions and then occurred rapidly in the Anisian. The key faunas of fishes and reptiles come from a limited area in eastern Yunnan and western Guizhou provinces, and these may be dated relative to shared stratigraphic units, and their palaeoenvironments reconstructed. The Luoping and Panxian biotas, both from the Guanling Formation, are dated as Anisian (Pelsonian) on the basis of conodonts and radiometric dates, the former being slightly older than the latter. The Xingyi biota is from the Zhuganpo Formation, and is Ladinian or early Carnian, while the Guanling biota is from the overlying Xiaowa Formation, dated as Carnian. The first three biotas include extensive benthos and burrowing in the sediments, and they were located in restricted basins close to shore. Further, even though the Luoping and Panxian biotas are of similar age, their faunas differ significantly, reflecting perhaps palaeogeographically isolated basins. Between the time of the Xingyi and Guanling biotas, there was a major transgression, and the Guanling biota is entirely different in character from the other three, being dominated by pelagic forms such as large floating crinoids attached to logs, very large ichthyosaurs and thalattosaurs, and pseudoplanktonic bivalves, with no benthos and no burrowing. Phylogenetic study of the fishes and marine reptiles shows apparently explosive diversification among 20 actinopterygian lineages very early in the Early Triassic, but a later expansion of marine reptile groups, in the late Olenekian and early Anisian. This offset in diversification patterns is matched by comparisons of feeding guild categories and body size data. New research tools will shed considerable light on the phylogenetic and ecological implications of recovery of mairne vertebrates in the Triassic.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Buddemeier, R.W.; Oberdorfer, J.A.

A wide variety of forces can produce head gradients that drive the flow and advective mixing of internal coral reef pore waters. Oscillatory gradients that produce mixing result from wave and tide action. Sustained gradients result from wave and tide-induced setup and ponding, from currents impinging on the reef structure, from groundwater heads, and from density differenced (temperature or salinity gradients). These gradients and the permeabilities and porosities of reef sediments are such that most macropore environments are dominated by advection rather than diffusion. The various driving forces must be analyzed to determine the individual and combined magnitudes of theirmore » effects on a specific reef pore-water system. Pore-water movement controls sediment diagenesis, the exchange of nutrients between sediments and benthos, and coastal/island groundwater resources. Because of the complexity of forcing functions, their interactions with specific local reef environments, experimental studies require careful incorporation of these considerations into their design and interpretation. 8 refs., 3 figs., 1 tab.« less

Effects of sediment burial on grass carp, Ctenopharyngodon idella (Valenciennes,1844), eggs

USGS Publications Warehouse

George, Amy E.; Chapman, Duane C.; Deters, Joseph E.; Erwin, Susannah O.; Hayer, Cari-Ann

2015-01-01

It is thought that grass carp (Ctenopharyngodon idella) eggs must remain suspended in the water column in order to hatch successfully. Using sand, the effects of varying sediment levels on grass carp eggs were tested at different developmental states and temperatures. Survival was high (15–35%, depending on temperature and trial) in the unburied treatment where eggs rested on a sand bed but were not covered by sediment. Survival was lower in the partial burial (5–10%) and very low (0–4%) in the full burial treatment. In all treatments, delayed hatching (organisms remaining in membranes past the stage of hatching competence) was noted. Deformities such as missing heads and pericardial edema occurred at high rates in the partial and full burials. Eggs that come in contact with the benthos and are resuspended in the water column should be considered in embryonic drift models.

Chemical Ecology of Chemosensation in Asteroidea: Insights Towards Management Strategies of Pest Species.

PubMed

Motti, Cherie A; Bose, Utpal; Roberts, Rebecca E; McDougall, Carmel; Smith, Meaghan K; Hall, Michael R; Cummins, Scott F

2018-02-01

Within the Phylum Echinodermata, the class Asteroidea, commonly known as starfish and sea stars, encompasses a large number of benthos inhabiting genera and species with various feeding modalities including herbivores, carnivores, omnivores and detritivores. The Asteroidea rely on chemosensation throughout their life histories including hunting prey, avoiding or deterring predators, in the formation of spawning aggregations, synchronizing gamete release and targeting appropriate locations for larval settlement. The identities of many of the chemical stimuli that mediate these physiological and behavioural processes remain unresolved even though evidence indicates they play pivotal roles in the functionality of benthic communities. Aspects of chemosensation, as well as putative chemically-mediated behaviours and the molecular mechanisms of chemoreception, within the Asteroidea are reviewed here, with particular reference to the coral reef pest the Crown-of-Thorns starfish Acanthaster planci species complex, in the context of mitigation of population outbreaks.

Movement and feeding ecology of recently emerged steelhead in Lake Ontario tributaries

USGS Publications Warehouse

Johnson, James H.; McKenna, James E.; Douglass, Kevin A.

2012-01-01

Steelhead (Oncorhynchus mykiss) ascend several Lake Ontario tributaries to spawn and juveniles are often the most abundant salmonid where spawning is successful. Movement and diet of recently emerged subyearling steelhead were examined in three New York tributaries of Lake Ontario. Downstream movement occurred mainly at night and consisted of significantly smaller fry that were feeding at lower levels than resident fry. Fry fed at the highest rate during the day and chironomids and baetids were the main components of their diet. The diet composition of steelhead fry was closely associated with the composition of the benthos in Trout Brook but more similar to the composition of the drift in the other streams. Daily ration was similar among streams, ranging from 10.2 to 14.3%. These findings are consistent with previous findings on the ecology of steelhead fry, as well as fry of other salmonid species

Sometimes two arms are enough--an unusual life-stage in brittle stars (Echinodermata: Ophiuroidea).

PubMed

Stöhr, Sabine; Alme, Øydis

2015-08-03

Off West Africa (Angola-Morocco), benthos samples were collected in the years 2005-2012. These contained 124 specimens of brittle stars with two long arms and three extremely short or absent arms and an elongated, narrow disc. These unusual brittle stars, as well as 33 specimens with five fully developed arms, were identified as Amphiura ungulata. The specimens with unequal arms were juvenile stages, whereas adults had five equal arms. The large number of specimens with unequal arms suggests that this condition is not the result of damage and regeneration, but a normal growth pattern in this species. This study documents the morphology by SEM, amends the species description, and discusses possible explanations for the evolution of this condition. Although brittle star species with unequal arm growth have been reported, this is an extreme case that was unknown before this study.

Trawling damage to Northeast Atlantic ancient coral reefs.

PubMed Central

Hall-Spencer, Jason; Allain, Valerie; Fosså, Jan Helge

2002-01-01

This contribution documents widespread trawling damage to cold-water coral reefs at 840-1300 m depth along the West Ireland continental shelf break and at 200 m off West Norway. These reefs are spectacular but poorly known. By-catches from commercial trawls for deep-water fish off West Ireland included large pieces (up to 1 m(2)) of coral that had been broken from reefs and a diverse array of coral-associated benthos. Five azooxanthellate scleractinarian corals were identified in these by-catches, viz. Desmophyllum cristagalli, Enallopsammia rostrata, Lophelia pertusa, Madrepora oculata and Solenosmilia variabilis. Dating of carbonate skeletons using (14)C accelerator mass spectrometry showed that the trawled coral matrix was at least 4550 years old. Surveys by remotely operated vehicles in Norway showed extensive fishing damage to L. pertusa reefs. The urgent need for deep-water coral conservation measures is discussed in a Northeast Atlantic context. PMID:11886643

Sewage impacts coral reefs at multiple levels of ecological organization.

PubMed

Reopanichkul, Pasinee; Schlacher, Thomas A; Carter, R W; Worachananant, Suchai

2009-09-01

Against a backdrop of rising sea temperatures and ocean acidification which pose global threats to coral reefs, excess nutrients and turbidity continue to be significant stressors at regional and local scales. Because interventions usually require local data on pollution impacts, we measured ecological responses to sewage discharges in Surin Marine Park, Thailand. Wastewater disposal significantly increased inorganic nutrients and turbidity levels, and this degradation in water quality resulted in substantial ecological shifts in the form of (i) increased macroalgal density and species richness, (ii) lower cover of hard corals, and (iii) significant declines in fish abundance. Thus, the effects of nutrient pollution and turbidity can cascade across several levels of ecological organization to change key properties of the benthos and fish on coral reefs. Maintenance or restoration of ecological reef health requires improved wastewater management and run-off control for reefs to deliver their valuable ecosystems services.

Significance of microcystin production by benthic communities in water treatment systems of arid zones.

PubMed

Hurtado, I; Aboal, M; Zafra, E; Campillo, D

2008-02-01

The study of the dynamics of phytobenthic and phytoplankton communities was undertaken, during a year, in the regulation reservoir associated with a water treatment plant (WTP), which provides the city of Murcia (Spain) with drinking water. Water samples were collected in different stages of the treatment. In the reservoir, the presence of dissolved and intracellular microcystins is constant, both in benthos and in plankton. The collected samples show a positive correlation between the dissolved microcystins and the benthic ones in the reservoir itself, as well as in an upstream reservoir (Ojós Reservoir). The treatment process (ozone+clarification+ozone+activated carbon) is very effective in the removal of toxins, and the drinking water produced is totally free of microcystins. The incorporation of the benthic communities in the routine check for the presence of microcystins is recommended, since it is not compulsory according to the current legislation.

Feeding periodicity, diet composition, and food consumption of subyearling rainbow trout in winter

USGS Publications Warehouse

Johnson, James H.; Chalupnicki, Marc; Abbett, Ross

2016-01-01

Although winter is a critically important period for stream salmonids, aspects of the ecology of several species are poorly understood. Consequently, we examined the diel feeding ecology of subyearling rainbow trout (Oncorhynchus mykiss) during winter in a central New York stream. Rainbow trout diet was significantly different during each 4-h interval and also differed from the drift and benthos. Feeding was significantly greater during darkness (i.e. 20:00 h – 04:00 h) than during daylight hours (i.e. 08:00 h – 16:00 h), peaking at 20:00 h. Daily food consumption (1.9 mg) and daily ration (3.4 %) during winter were substantially lower than previously reported for subyearling rainbow trout in the same stream during summer. These findings provide important new insights into the winter feeding ecology of juvenile rainbow trout in streams.

Nitrate removal rates change over time during tracer tests: towards zone specific reaction rates and watershed budgets.

NASA Astrophysics Data System (ADS)

Aubeneau, A. F.; Ghassani, A. F.; Avilar, C.; Xiong, X.; Wang, S.

2016-12-01

Fertilizer pollution leading to downstream eutrofication and hypoxia is a grand challenge affecting aquatic ecosystems and human activities. Here, we present numerical and experimental results showing that simple tracer tests can provide sufficient data to disentangle the contribution of the water column, the benthic zone and the hyporheic zone to total nitrate uptake at the reach scale. The processes that drive nitrate removal are very different in these three distinct environments and their relative contribution change along the river continuum. The dark, often hypoxic hyporheic zone is where denitrification takes place, while autotrophs temporarily store nitrogen in their biomass in the benthos or the water column. The contribution of pelagic uptake increases downstream as rivers are deeper and slower. Together, these findings can be gathered to empirically inform watershed models and arrive at better nutrient budgets and water quality predictions.

Role of Sediments and Nutrients in the Condition of a Coral Reef Under Tourist Pressure: Akumal México.

NASA Astrophysics Data System (ADS)

Naranjo-Garcia, M. J.; Vadés Lozano, D. S.; Real-De-Leon, E.; Lopez-Aguiar, K.; Garza-Perez, J. R.

2014-12-01

Akumal, Mexico, was the first tourist resort in the Mexican Caribbean mainland, its highly developed coastal zone lies directly above the phreatic, and it is directly connected to the sub-littoral waters. Akumal is also known as a well-developed fringing coral reef, now in a critical condition. The main objective of this study was to explore the relationship between two of the main indicators of human pressure (nutrients and sedimentation, linked to coastal development and water run-offs) and the condition of the reef benthos, during a year. The sampling design used four transects perpendicular to shore, associated to different tourist and water run-off exposure, for a total of 12 stations distributed in three different reef zones (transition zone, shallow and deep spurs and grooves). Monthly samples were collected: water samples close to the reef lagoon drain channels and at bottom depth at each station, and sediment traps were recovered and replaced also at each station. Reef Benthos videotransects were recorded bi-monthly at each station to assess its condition. Macroalgae and filamentous algae dominate benthic cover (up to 50%), hard-coral cover ranges from 5-9%. Five coral-diseases were recorded, affecting 10.16% of the coral colonies: Caribbean Ciliate Infection, White Band, Purple Spots, White Spots and Yellow Band. The sedimentation rate -sr- ranged from 0.13 to 83.7 mg/cm2/day during the year; 86% of the samples had a sr ≤ 10 mg/cm2/day (reefs not stressed); 13% of the samples had a sr ranging from 10 to 50 mg/cm2/day (stressed reefs); and 1% of the samples were over the critical threshold (>50 mg/cm2/day). Dissolved Inorganic Nitrogen concentrations during the year were above those recorded previously in Caribbean reefs. The most abundant fraction was ammonium, surpassing both Mexican norms: For protection of aquatic life in coastal zones (0.01 mg/L), and the critical threshold for aquatic life (0.4 mg/L). These concentration limits are considered as drivers of eutrophication, one of the main established causes of reef degradation globally. High concentrations of ammonium and other nutrients have been linked to increases in algae cover and coral diseases incidence, and to decreases in rates of coral calcification, fertility, production and viability of coral larvae, and the associated diversity loss.

Hydrodynamic control of phytoplankton loss to the benthos in an estuarine environment

USGS Publications Warehouse

Jones, Nicole L.; Thompson, Janet K.; Arrigo, Kevin R.; Monismith, Stephen G.

2009-01-01

Field experiments were undertaken to measure the influence of hydrodynamics on the removal of phytoplankton by benthic grazers in Suisun Slough, North San Francisco Bay. Chlorophyll a concentration boundary layers were found over beds inhabited by the active suspension feeders Corbula amurensis and Corophium alienense and the passive suspension feeders Marenzellaria viridis and Laonome sp. Benthic losses of phytoplankton were estimated via both the control volume and the vertical flux approach, in which chlorophyll a concentration was used as a proxy for phytoplankton biomass. The rate of phytoplankton loss to the bed was positively correlated to the bed shear stress. The maximum rate of phytoplankton loss to the bed was five times larger than estimated by laboratory-derived pumping rates for the active suspension feeders. Reasons for this discrepancy are explored including a physical mechanism whereby phytoplankton is entrained in a near-bed fluff layer where aggregation is mediated by the presence of mucus produced by the infaunal community.

Hydrodynamic control of phytoplankton loss to the benthos in an estuarine environment

USGS Publications Warehouse

Jones, N.L.; Thompson, J.K.; Arrigo, K.R.; Monismith, Stephen G.

2009-01-01

Field experiments were undertaken to measure the influence of hydrodynamics on the removal of phytoplankton by benthic grazers in Suisun Slough, North San Francisco Bay. Chlorophyll a concentration boundary layers were found over beds inhabited by the active suspension feeders Corbula amurensis and Corophium alienense and the passive suspension feeders Marenzellaria viridis and Laonome sp. Benthic losses of phytoplankton were estimated via both the control volume and the vertical flux approach, in which chlorophyll a concentration was used as a proxy for phytoplankton biomass. The rate of phytoplankton loss to the bed was positively correlated to the bed shear stress. The maximum rate of phytoplankton loss to the bed was five times larger than estimated by laboratory-derived pumping rates for the active suspension feeders. Reasons for this discrepancy are explored including a physical mechanism whereby phytoplankton is entrained in a near-bed fluff layer where aggregation is mediated by the presence of mucus produced by the infaunal community. ?? 2009, by the American Society of Limnology and Oceanography, Inc.

Foraminiferal assemblages from a transitional tropical upwelling zone in the Golfe d'Arguin, Mauritania

NASA Astrophysics Data System (ADS)

Reymond, Claire E.; Mateu-Vicens, Guillem; Westphal, Hildegard

2014-07-01

With the growing pressure of eutrophication in tropical regions, the Mauritian shelf provides a natural situation to understand the variability in mesotrophic assemblages. Site-specific dynamics occur throughout the 1200 m depth gradient. The shallow assemblages divide into three types of warm-water mesotrophic foraminiferal assemblages, which is not only a consequence of high primary productivity restricting light to the benthos but due to low pore water oxygenation, shelf geomorphology, and sediment partitioning. In the intermediate depth (approx. 500 m), the increase in foraminiferal diversity is due to the cold-water coral habitat providing a greater range of micro niches. Planktonic species characterise the lower bathyal zone, which emphasizes the reduced benthic carbonate production at depth. Although, due to the strong hydrodynamics within the Golf, planktonic species occur in notable abundances through out the whole depth gradient. Overall, this study can easily be compared to other tropical marine settings investigating the long-term effects of tropical eutrophication and the biogeographic distribution of carbonate producing organisms.

Exobiology site selection for future Mars missions: Martian paleolake sediments and terrestrial analogs

NASA Technical Reports Server (NTRS)

Wharton, Robert A., Jr.

1989-01-01

This research was conducted to establish the scientific framework for the exobiological study of sediments on Mars and to encourage the selection of these sedimentary deposits as sampling sites for future Mars missions. A study was completed on the Antarctic Dry Valley Lakes (terrestrial analogs of the purported Martian paleolakes) and their sediments that allowed the development of quantitative models relating environmental factors to the nature of the biological community and sediment forming processes. The publications presented include: (1) Diversity of micro-fungi isolated in an Antarctic dry valley; (2) Lake Hoare, Antarctica--sedimentation through a thick perennial ice cover; (3) The possibility of life on Mars during a water-rich past; (4) An Antarctic research outpost as a model for planetary exploration; (5) Early Martian environments--the Antarctic and other terrestrial analogs; (6) Lipophilic pigments from the benthos of a perennially ice-covered Antarctic lake; and (7) Perennially ice-covered Lake Hoare, Antarctica--physical environment, biology, and sedimentation.

The use of benthic indicators in Europe: from the Water Framework Directive to the Marine Strategy Framework Directive.

PubMed

Van Hoey, Gert; Borja, Angel; Birchenough, Silvana; Buhl-Mortensen, Lene; Degraer, Steven; Fleischer, Dirk; Kerckhof, Francis; Magni, Paolo; Muxika, Iñigo; Reiss, Henning; Schröder, Alexander; Zettler, Michael L

2010-12-01

The Water Framework Directive (WFD) and the Marine Strategy Framework Directive (MSFD) are the European umbrella regulations for water systems. It is a challenge for the scientific community to translate the principles of these directives into realistic and accurate approaches. The aim of this paper, conducted by the Benthos Ecology Working Group of ICES, is to describe how the principles have been translated, which were the challenges and best way forward. We have tackled the following principles: the ecosystem-based approach, the development of benthic indicators, the definition of 'pristine' or sustainable conditions, the detection of pressures and the development of monitoring programs. We concluded that testing and integrating the different approaches was facilitated during the WFD process, which led to further insights and improvements, which the MSFD can rely upon. Expert involvement in the entire implementation process proved to be of vital importance. Copyright © 2010 Elsevier Ltd. All rights reserved.

Effects of simulated oil exposure on two intertidal macrozoo benthos: Tympanotonus fuscata (L.) and Uca tangeri (Eydoux, 1935) in a tropical estuarine ecosystem.

PubMed

Ewa-Oboho, I O; Abby-Kalio, N J

1994-08-01

The impacts of simulated Nigerian light crude oil on mud flat periwinkles, Tympanotonus fuscata (L.), and fiddler crabs, Uca tangeri (Eydoux, 1935) was examined through field experiments conducted in the Bonny estuary of the Niger Delta (southern Nigeria). The purpose was to assess the fate and effects of a known quantity of the Nigerian light crude oil on this environment. Drastic changes in the densities of T. fuscata and U. tangeri observed immediately after spills was attributed to the effects of the oil. A large increase in Uca biomass occurred in the affected area. Salinity and temperature in the study area showed little fluctuations throughout the survey. Sediment characteristics were similar for all sites (stations). Grain-size analysis revealed that sediments at the study area were 70% silt. Migration of oil via tidal percolation was observed as much as 11 cm beneath the sediment surface.

Benthic status of near-shore fishing grounds in the central Philippines and associated seahorse densities.

PubMed

Marcus, J E; Samoilys, M A; Meeuwig, J J; Villongco, Z A D; Vincent, A C J

2007-09-01

Benthic status of 28 near-shore, artisanal, coral reef fishing grounds in the central Philippines was assessed (2000-2002) together with surveys of the seahorse, Hippocampus comes. Our measures of benthic quality and seahorse densities reveal some of the most degraded coral reefs in the world. Abiotic structure dominated the fishing grounds: 69% of the benthos comprised rubble (32%), sand/silt (28%) and dead coral (9%). Predominant biotic structure included live coral (12%) and Sargassum (11%). Rubble cover increased with increasing distance from municipal enforcement centers and coincided with substantial blast fishing in this region of the Philippines. Over 2 years, we measured a significant decrease in benthic 'heterogeneity' and a 16% increase in rubble cover. Poor benthic quality was concomitant with extremely low seahorse densities (524 fish per km(2)). Spatial management, such as marine reserves, may help to minimize habitat damage and to rebuild depleted populations of seahorses and other reef fauna.

Seasonal variation of benthic macro invertebrates from Tons River of Garhwal Himalaya Uttarakhand.

PubMed

Negi, R K; Mamgain, Sheetal

2013-11-15

Present investigation was carried out to assess the seasonal variation of benthic macro-invertebrates from the Tons river, a tributary of Yamuna River in Garhwal Himalaya, Uttrakhand during December, 2007 to November, 2009. The seasonal benthic diversity was correlated with various physic-chemical parameters which documented that the macrobenthic diversity is mostly regulated by the dissolved oxygen in the water while temperature and free CO2 were found to be inversely correlated with the benthic fauna. Maximum diversity of benthos was reported at the upstream site ('H' 0.204) during the winter season while it was recorded minimum during the rainy season at all the sites. Maximum diversity is reported during the winter season at all the sites. The benthic fauna is represented by three phylum, 4 classes and 10 orders with Insecta emerging as the most dominant class. Maximum genera were reported from midstream site as it acts as ecotone between upstream and downstream.

Phallodrilus hallae, a new tubificid oligochaete from the St. Lawrence Great Lakes

USGS Publications Warehouse

Cook, David G.; Hiltunen, Jarl K.

1975-01-01

The predominantly marine tubificid genus Phallodrilus is defined, a key to its nine species constructed, and an illustrated description of Phallodrilus hallae n. sp. from the St. Lawrence Great Lakes presented. The species is distinguished from other members of the genus by its well-developed atrial musculature, extensions of which ensheath the posterior prostatic ducts.Phallodrilus hallae n. sp. is a small worm which is widely distributed in the sublittoral and profundal benthos of Lake Superior; lakewide it occurred in mean densities of 50 individuals per square metre. Available records indicate a more restricted distribution in Lake Huron and Georgian Bay. We suggest that P. hallae n. sp. is either a glaciomarine relict species, or that it entered the Great Lakes system at the time of the marine transgression of the St. Lawrence valley. The apparent restriction of P. hallae n. sp. to waters of high quality suggests that it may be a sensitive oligotrophic indicator species.

Offshore oceanographic and environmental monitoring services for the Strategic Petroleum Reserve. Annual report for the Bryan Mound site, September 1982-August 1983. Volume III. Executive summary

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hann, R.W. Jr.; Giammona, C.P.; Randall, R.E.

1984-03-01

This report describes the findings for the 12 months of postdisposal study conducted from September 1982 through August 1983. The areas of investigation are benthos, brine plume, data management, nekton, physical oceanography, and water and sediment quality. The specific objectives of this report are: (1) to describe the physical oceanographic and meteorological conditions which have been measured at the offshore diffuser site and in the surrounding waters; (2) to describe the effect of brine discharge on the benthic community in the diffuser site area; (3) to discuss the effect of the brine discharge on the quality of the water andmore » sediment in the vicinity of the diffuser site; (4) to describe the measurement and empirical prediction of the areal and vertical extent of the brine plume; and (5) to characterize the effect of brine discharge on the nekton community in the vicinity of the diffuser. 2 figures.« less

Climate-driven regime shifts in Arctic marine benthos

PubMed Central

Kortsch, Susanne; Primicerio, Raul; Beuchel, Frank; Renaud, Paul E.; Rodrigues, João; Lønne, Ole Jørgen; Gulliksen, Bjørn

2012-01-01

Climate warming can trigger abrupt ecosystem changes in the Arctic. Despite the considerable interest in characterizing and understanding the ecological impact of rapid climate warming in the Arctic, few long time series exist that allow addressing these research goals. During a 30-y period (1980–2010) of gradually increasing seawater temperature and decreasing sea ice cover in Svalbard, we document rapid and extensive structural changes in the rocky-bottom communities of two Arctic fjords. The most striking component of the benthic reorganization was an abrupt fivefold increase in macroalgal cover in 1995 in Kongsfjord and an eightfold increase in 2000 in Smeerenburgfjord. Simultaneous changes in the abundance of benthic invertebrates suggest that the macroalgae played a key structuring role in these communities. The abrupt, substantial, and persistent nature of the changes observed is indicative of a climate-driven ecological regime shift. The ecological processes thought to drive the observed regime shifts are likely to promote the borealization of these Arctic marine communities in the coming years. PMID:22891319

Evaluation of potential relationships between benthic community structure and toxic metals in Laizhou Bay.

PubMed

Wu, Bin; Song, Jinming; Li, Xuegang

2014-10-15

The objective of the present study was to examine the relationships between benthic community structure and toxic metals using bivariate/multivariate techniques at 17 sediment locations in Laizhou Bay, North China. Sediment chemical data were evaluated against geochemical background values and sediment quality guidelines, which identified Cu and As as contaminants of concern with a moderate potential for adverse effects. Benthic community data were subjected to non-metric multidimensional scaling, which generated four groups of stations. Spearman rank correlation was then employed to explore the relationships between the major axes of heavy metals and benthic community structure. However, weak and insignificant correlations were found between these axes, indicating that contaminants of concern may not be the primary explanatory factors. Polychaeta were abundant in southern Laizhou Bay, serving as a warning regarding the health status of the ecosystem. Integrated sediment quality assessment showed sediments from northern central locations were impaired, displaying less diverse benthos and higher metal contamination. Copyright © 2014 Elsevier Ltd. All rights reserved.

Role of Marine Snows in Microplastic Fate and Bioavailability.

PubMed

Porter, Adam; Lyons, Brett P; Galloway, Tamara S; Lewis, Ceri

2018-06-19

Microplastics contaminate global oceans and are accumulating in sediments at levels thought sufficient to leave a permanent layer in the fossil record. Despite this, the processes that vertically transport buoyant polymers from surface waters to the benthos are poorly understood. Here we demonstrate that laboratory generated marine snows can transport microplastics of different shapes, sizes, and polymers away from the water surface and enhance their bioavailability to benthic organisms. Sinking rates of all tested microplastics increased when incorporated into snows, with large changes observed for the buoyant polymer polyethylene with an increase in sinking rate of 818 m day -1 and for denser polyamide fragments of 916 m day -1 . Incorporation into snows increased microplastic bioavailability for mussels, where uptake increased from zero to 340 microplastics individual -1 for free microplastics to up to 1.6 × 10 5 microplastics individual -1 when incorporated into snows. We therefore propose that marine snow formation and fate has the potential to play a key role in the biogeochemical processing of microplastic pollution.

Effects of light pollution on the emergent fauna of shallow marine ecosystems: Amphipods as a case study.

PubMed

Navarro-Barranco, Carlos; Hughes, Lauren Elizabeth

2015-05-15

Light pollution from coastal urban development is a widespread and increasing threat to biodiversity. Many amphipod species migrate between the benthos and the pelagic environment and light seems is a main ecological factor which regulates migration. We explore the effect of artificial lighting on amphipod assemblages using two kind of lights, LED and halogen, and control traps in shallow waters of the Great Barrier Reef. Both types of artificial light traps showed a significantly higher abundance of individuals for all species in comparison to control traps. LED lights showed a stronger effect over the amphipod assemblages, with these traps collecting a higher number of individuals and differing species composition, with some species showing a specific attraction to LED light. As emergent amphipods are a key ecological group in the shallow water environment, the impact of artificial light can affect the broader functioning of the ecosystem. Copyright © 2015 Elsevier Ltd. All rights reserved.

Bioenergetic relations in submerged aquatic vegetation: An experimental test of prey use by juvenile bluegills

USGS Publications Warehouse

Richardson, W.B.; Zigler, S.J.; Dewey, M.R.

1998-01-01

We experimentally tested the hypotheses that bluegills in vegetated habitats grow more rapidly than in nonvegetated habitats because (1) vegetated habitats contain a greater caloric density and (2) are less susceptible to energetic depletion. The 10-week experiment was conducted in enclosures containing factorial combinations of the presence or absence of Vallisneria americana and juvenile bluegills Lepomis macrochirus. After 6 weeks, Vallisneria-only treatments contained a mean of 1048 cal/m2 in the benthos, whereas treatments with both Vallisneria and bluegills contained 610 cal/m2. Hyalella azteca, a preferred prey of bluegill, were nearly depleted in nonvegetated enclosures, whereas Hyalella densities in enclosures with Vallisneria were much less effected by fish. Bluegill growth was significantly greater with Vallisneria than without but declining water temperatures after week 6 resulted in slower growth despite abundant prey. Ultimately, growth of bluegill resulted from an interaction between availability and ingestion of prey, and water temperature. ?? Munksgaard, 1998.

Integrated assessment of mangrove sediments in the Camamu Bay (Bahia, Brazil).

PubMed

Paixão, Joana F; de Oliveira, Olívia M C; Dominguez, José M L; Almeida, Edna dos Santos; Carvalho, Gilson Correia; Magalhães, Wagner F

2011-03-01

Camamu Bay, an Environmentally Protected Area, may be affected by the pressures of tourism and oil exploration in the adjacent continental platform. The current quality of the mangrove sediments was evaluated by porewater bioassays using embryos of Crassostrea rhizophorae and by an analysis of benthic macrofauna and its relationships with organic compounds, trace metals and bioavailability. Porewater toxicity varied from low to moderate in the majority of the samples, and polychaetes dominated the benthos. The Grande Island sampling station (Station 1) presented more sandy sediments, differentiated macrobenthic assemblages and the highest metal concentrations in relation to other stations and guideline values, and it was the only station that indicated a possible bioavailability of metals. The origin of the metals (mainly barium) is most likely associated with the barite ore deposits located in the Grande and Pequena islands. These results may be useful for future assessment of the impact of oil exploration in the coastal region. Copyright © 2010 Elsevier Inc. All rights reserved.

Influence of trophic variables on the depth-range distributions and zonation rates of deep-sea megafauna: the case of the Western Mediterranean assemblages

NASA Astrophysics Data System (ADS)

Cartes, Joan E.; Carrassón, Maite

2004-02-01

We studied in a deep-sea megafaunal community the relationship of different trophic variables to the depth ranges inhabited by and depth zonation of species, after the ordination of fish and decapod crustaceans in feeding guilds. The variables studied included trophic level of species, food sources exploited, mean weight of predators and prey, feeding intensity and dietary diversity of species. We compiled data on the diets of 18 species of fish and 14 species of decapod crustaceans distributed between 862 and 2261 m in the Catalano-Balearic Basin (Western Mediterranean). Feeding guilds were identified for fish and decapods separately and at two depth strata (862-1400 and 1400-2261 m). The zonation rates (degree of depth overlap) between species within each trophic guild differed by guild and taxon (fish and decapods). The three guilds (G1, G2 and G3) of decapod crustaceans showed quite significantly distinct overlap. G1 (plankton feeders) showed the widest overlap (1326-1381 m) and G3 (benthos feeders) the narrowest (330-476 m). Among the four guilds established for fish, G1, comprising larger predators such as sharks, showed the lowest overlap (between 194 and 382 m). Macrourids overlap ranged between 122 and 553 m, the rest of benthopelagic feeders ranged between 423 and 970 m, and G3 (benthos feeders) gave overlaps between 867 and 1067 m. Significant differences were detected between the depth overlap of most feeding guilds excluding the paired comparisons between G1/macrourids, and G2/G3. Among decapods higher zonation rates (=lower depth overlap) were identified in those guilds occupying higher trophic levels (TL), with a similar, though not as general, trend among fish. In the ordination of species in feeding guilds, TL as indicated by δ15N measurements, was significantly correlated with Dimension 1 (D1) of ordination—MDS-analysis, both in fish and decapods at 862-1400 m. However, deeper (at 1400-2261 m), D1 was not significantly correlated with TL but with the mean weight of predator and prey in fish. In general, TL was again the main explanatory variable (accumulated variances, r2, explained by multi-linear regression—MLR-models between 0.54 and 0.69) both of the zonation rates and the depth ranges occupied by megafauna (fish and decapods together) throughout all the depth range studied. Possible relationships between zonation rates /depth distributions and other biological variables (i.e. egg size, fecundity) are also discussed.

Defining winter trophic habitat of juvenile Gulf Sturgeon in the Suwannee and Apalachicola rivermouth estuaries, acoustic telemetry investigations

USGS Publications Warehouse

Sulak, K.J.; Randall, M.T.; Edwards, R.E.; Summers, T.M.; Luke, K.E.; Smith, W.T.; Norem, A.D.; Harden, William M.; Lukens, R.H.; Parauka, F.; Bolden, S.; Lehnert, R.

2009-01-01

Three automated listening post-telemetry studies were undertaken in the Suwannee and Apalachicola estuaries to gain knowledge of habitats use by juvenile Gulf Sturgeons (Acipenser oxyrinchus desotoi) on winter feeding grounds. A simple and reliable method for external attachment of small acoustic tags to the dorsal fin base was developed using shrink-tubing. Suspending receivers on masts below anchored buoys improved reception and facilitated downloading; a detection range of 500–2500 m was realized. In the Apalachicola estuary, juvenile GS stayed in shallow water (< 2 m) within the estuarine transition zone all winter in the vicinity of the Apalachicola River mouth. Juvenile GS high-use areas did not coincide with high density benthic macrofauna areas from the most recent (1999) benthos survey. In the Suwannee estuary, juveniles ranged widely and individually throughout oligohaline to mesohaline subareas of the estuary, preferentially using mesohaline subareas seaward of Suwannee Reef (52% of acoustic detections). The river mouth subarea was important only in early and late winter, during the times of adult Gulf Sturgeon migrations (41% of detections). Preferred winter feeding subareas coincided spatially with known areas of dense macrofaunal benthos concentrations. Following a dramatic drop in air and water temperatures, juvenile GS left the river mouth and estuary, subsequently being detected 8 km offshore in polyhaline open Gulf of Mexico waters, before returning to the estuary. Cold-event offshore excursions demonstrate that they can tolerate full-salinity polyhaline waters in the open Gulf of Mexico, for at least several days at a time. For juvenile sturgeons, the stress and metabolic cost of enduring high salinity (Jarvis et al., 2001; McKenzie et al., 2001; Singer and Ballantyne, 2002) for short periods in deep offshore waters seems adaptively advantageous relative to the risk of cold-event mortality in shallow inshore waters of lower salinity. Thus, while juveniles can tolerate high salinities for days to weeks to escape cold events, they appear to make only infrequent use of open polyhaline waters. Throughout the winter foraging period, juvenile GS stayed primarily within the core area of Suwannee River mouth influence, extending about 12 km north and south of the river mouth, and somewhat seaward of Suwannee Reef (< 5 km offshore). None were detected departing the core area past either of the northern or southern acoustic gates, located 66 and 52 km distant from the river mouth, respectively.

Validation of trophic and anthropic underwater noise as settlement trigger in blue mussels

NASA Astrophysics Data System (ADS)

Jolivet, Aurélie; Tremblay, Rejean; Olivier, Fréderic; Gervaise, Cédric; Sonier, Rémi; Genard, Bertrand; Chauvaud, Laurent

2016-09-01

Like the majority of benthic invertebrates, the blue mussel Mytilus edulis has a bentho-pelagic cycle with its larval settlement being a complex phenomenon involving numerous factors. Among these factors, underwater noise and pelagic trophic conditions have been weakly studied in previous researches. Under laboratory conditions, we tested the hypothesis that picoplankton assimilation by the pediveliger blue mussel larvae acts as a food cue that interacts with anthropic underwater sound to stimulate settlement. We used 13C-labeling microalgae to validate the assimilation of different picoplankton species in the tissues of pediveliger larvae. Our results clearly confirm our hypothesis with a significant synergic effect of these two factors. However, only the picoeukaryotes strains assimilated by larvae stimulated the settlement, whereas the non-ingested picocyanobacteria did not. Similar positive responses were observed with underwater sound characterized by low frequency vessel noises. The combination of both factors (trophic and vessel noise) drastically increased the mussel settlement by an order of 4 compared to the control (without picoplankton and noise). Settlement levels ranged from 16.5 to 67% in 67 h.

Observations of cocooned Hydrobaenus (Diptera: Chironomidae) larvae in Lake Michigan

USGS Publications Warehouse

Tucker, Taaja R.; Hudson, Patrick L.; Riley, Stephen

2016-01-01

Larvae of the family Chironomidae have developed a variety of ways to tolerate environmental stress, including the formation of cocoons, which allows larvae to avoid unfavorable temperature conditions, drought, or competition with other chironomids. Summer cocoon formation by younger instars of the genus Hydrobaenus Fries allows persistence through increased temperatures and/or intermittent dry periods in arid regions or temporary habitats, but this behavior was not observed in the Great Lakes until the current study. Cocoon-aestivating Hydrobaenus sp. larvae were found in benthic grab samples collected in 2010–2013 near Sleeping Bear Dunes National Lakeshore in northern Lake Michigan with densities up to 7329/m2. The aestivating species was identified as Hydrobaenus johannseni (Sublette, 1967), and the associated chironomid community was typical for an oligotrophic nearshore system. Hydrobaenus cocoon formation in the Great Lakes was likely previously unnoticed due to the discrepancies between the genus' life history and typical benthos sampling procedures which has consequences for describing chironomid communities where Hydrobaenus is present.

Deep-sea faunal communities associated with a lost intermodal shipping container in the Monterey Bay National Marine Sanctuary, CA.

PubMed

Taylor, Josi R; DeVogelaere, Andrew P; Burton, Erica J; Frey, Oren; Lundsten, Lonny; Kuhnz, Linda A; Whaling, P J; Lovera, Christopher; Buck, Kurt R; Barry, James P

2014-06-15

Carrying assorted cargo and covered with paints of varying toxicity, lost intermodal containers may take centuries to degrade on the deep seafloor. In June 2004, scientists from Monterey Bay Aquarium Research Institute (MBARI) discovered a recently lost container during a Remotely Operated Vehicle (ROV) dive on a sediment-covered seabed at 1281 m depth in Monterey Bay National Marine Sanctuary (MBNMS). The site was revisited by ROV in March 2011. Analyses of sediment samples and high-definition video indicate that faunal assemblages on the container's exterior and the seabed within 10 m of the container differed significantly from those up to 500 m. The container surface provides hard substratum for colonization by taxa typically found in rocky habitats. However, some key taxa that dominate rocky areas were absent or rare on the container, perhaps related to its potential toxicity or limited time for colonization and growth. Ecological effects appear to be restricted to the container surface and the benthos within ∼10 m. Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.

Chemical Munitions Search & Assessment-An evaluation of the dumped munitions problem in the Baltic Sea

NASA Astrophysics Data System (ADS)

Bełdowski, Jacek; Klusek, Zygmunt; Szubska, Marta; Turja, Raisa; Bulczak, Anna I.; Rak, Daniel; Brenner, Matthias; Lang, Thomas; Kotwicki, Lech; Grzelak, Katarzyna; Jakacki, Jaromir; Fricke, Nicolai; Östin, Anders; Olsson, Ulf; Fabisiak, Jacek; Garnaga, Galina; Nyholm, Jenny Rattfelt; Majewski, Piotr; Broeg, Katja; Söderström, Martin; Vanninen, Paula; Popiel, Stanisław; Nawała, Jakub; Lehtonen, Kari; Berglind, Rune; Schmidt, Beata

2016-06-01

Chemical Munitions Search & Assessment (CHEMSEA) project has performed studies on chemical weapon (CW) detection, sediment pollution and spreading as well as biological effects of chemical warfare agents (CWAs) dumped in the Baltic Sea. Results suggest that munitions containing CWAs are more scattered on the seafloor than suspected, and previously undocumented dumpsite was discovered in Gdansk Deep. Pollution of sediments with CWA degradation products was local and close to the detected objects; however the pollution range was larger than predicted with theoretical models. Bottom currents observed in the dumpsites were strong enough for sediment re-suspension, and contributed to the transport of polluted sediments. Diversity and density of the faunal communities were poor at the dumping sites in comparison to the reference area, although the direct effects of CWA on benthos organisms were difficult to determine due to hypoxic or even anoxic conditions near the bottom. Equally, the low oxygen might have affected the biological effects assessed in cod and caged blue mussels. Nonetheless, both species showed significantly elevated molecular and cellular level responses at contaminated sites compared to reference sites.

Benthos response following petroleum exploration in the southern Caspian Sea: Relating effects of nonaqueous drilling fluid, water depth, and dissolved oxygen.

PubMed

Tait, R D; Maxon, C L; Parr, T D; Newton, F C

2016-09-15

The effects of linear alpha olefin (LAO) nonaqueous drilling fluid on benthic macrofauna were assessed over a six year period at a southern Caspian Sea petroleum exploration site. A wide-ranging, pre-drilling survey identified a relatively diverse shelf-depth macrofauna numerically dominated by amphipods, cumaceans, and gastropods that transitioned to a less diverse assemblage dominated by hypoxia-tolerant annelid worms and motile ostracods with increasing depth. After drilling, a similar transition in macrofauna assemblage was observed with increasing concentration of LAO proximate to the shelf-depth well site. Post-drilling results were consistent with a hypothesis of hypoxia from microbial degradation of LAO, supported by the presence of bacterial mats and lack of oxygen penetration in surface sediment. Chemical and biological recoveries at ≥200m distance from the well site were evident 33months after drilling ceased. Our findings show the importance of monitoring recovery over time and understanding macrofauna community structure prior to drilling. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

[Environmental behavior and ecological effect of polydimethylsiloxane: a review].

PubMed

Yang, Shang-Yuan; Li, Xin; Yang, Jia; Shen, Chao-Feng; Yu, Hua-Dong; Lu, Kang

2012-08-01

Polydimethylsiloxane (PDMS) is widely used in industrial products, medical and health care products, and personal care products. In the treatment process of sewage, PDMS can be hardly biodegraded but enter the environment mainly through the discharge of excess sludge, and only a small amount of PDMS adsorbed on the suspended solids or sludge particle surface is discharged into water body and sediment with treated sewage. There is no enough evidence to verify that PDMS can vertically migrate in sediment. The degradation of PDMS in sediment is very slow, but PDMS can be degraded in different types of soils. PDMS has less risk to aquatic ecosystem, and no apparent acute toxicity to benthos. In soil environment, PDMS and its degradation products have no significant effects on the soil microorganisms, soil animals, and crops. Though a few studies indicated that PDMS and its degradation products have relatively low ecological toxicity in various environments, it is still very important to clarify the potential threat of PDMS to the environment because of the increasingly large number of PDMS being produced and used.

[A review of the role and function of microbes in coral reef ecosystem].

PubMed

Zhou, Jin; Jin, Hui; Cai, Zhong-Hua

2014-03-01

Coral reef is consisted with several kinds of reef-associated organisms, including coral, fish, benthos, algae and microbes, which is an important marine ecosystem. Coral reef lives in the oligotrophic environment, has very highly primary productivity and net productivity, and is called "tropical rain forest in ocean". In corals, diverse microorganisms exert a significant influence on biogeochemical and ecological processes, including food webs, organism life cycles, and nutrient cycling. With the development of molecular biology, the role of microorganisms in a coral system is becoming more outstanding. In this article, we reviewed current understanding on 1) the onset of coral-bacterial associations; 2) the characteristics of microbes in coral (specificity, plasticity and co-evolution) ; 3) the role and signal regulation of microbes in the health and disease of coral; and 4) the response mechanism of microbes for global climatic change and consequent effects, such as temperature rise, ocean acidification and eutrophication. The aims of this article were to summarize the latest theories and achievements, clear the mechanism of microbial ecology in coral reefs and provide a theoretical reference for better protection and maintaining the coral's biodiversity.

Do no-take reserves benefit Florida's corals? 14 years of change and stasis in the Florida Keys National Marine Sanctuary

NASA Astrophysics Data System (ADS)

Toth, L. T.; van Woesik, R.; Murdoch, T. J. T.; Smith, S. R.; Ogden, J. C.; Precht, W. F.; Aronson, R. B.

2014-09-01

With coral populations in decline globally, it is critical that we tease apart the relative impacts of ecological and physical perturbations on reef ecosystems to determine the most appropriate management actions. This study compared the trajectories of benthic assemblages from 1998 to 2011 in three no-take reserves and three sites open to fishing, at 7-9 and 15-18 m depth in the Florida Keys. We evaluated temporal changes in the benthic assemblage to infer whether fisheries bans in no-take reserves could have cascading effects on the benthos in this region. Coral cover declined significantly over time at our sites and that trend was driven almost exclusively by decline of the Orbicella (formerly Montastraea) annularis species complex. Other coral taxa showed remarkable stasis and resistance to a variety of environmental perturbations. Protection status did not influence coral or macroalgal cover. The dynamics of corals and macroalgae in the 15 years since the reserves were established in 1997 suggest that although the reserves protected fish, they were of no perceptible benefit to Florida's corals.

Preface and brief synthesis for the FOODBANCS volume

NASA Astrophysics Data System (ADS)

Smith, Craig R.; DeMaster, David J.

2008-11-01

In this volume we present results from the FOODBANCS Project, which examined the fate and benthic community impact of summer bloom material on the West Antarctic Peninsula shelf floor. The project involved a 5-cruise, 15-month time-series program in which sediment-trap moorings, core sampling, radiochemical profiling, sediment respirometry, bottom photography, and bottom trawling were used to evaluate: (1) seafloor deposition and lability of POC, (2) patterns of labile POC consumption and sediment mixing by benthos, and (3) seasonal and inter-annual variations in biotic abundance, biomass, reproductive condition, recruitment, and sediment community respiration. We find that the seafloor flux and accumulation of particulate organic carbon on the West Antarctic Peninsula shelf exhibit intense seasonal and interannual variability. Nonetheless, many key benthic processes, including organic-matter degradation, bioturbation, deposit feeding, and faunal abundance, reproduction and recruitment, show relatively muted response to this intense seasonal and inter-annual variability in export flux. We thus hypothesize that benthic ecosystems on the Antarctic shelf act as "low-pass" filters, and may be extremely useful in resolving the impacts of climatic change over periods of years to decades in Antarctic Peninsula region.

Response of stream benthic macroinvertebrates to current water management in Alpine catchments massively developed for hydropower.

PubMed

Quadroni, Silvia; Crosa, Giuseppe; Gentili, Gaetano; Espa, Paolo

2017-12-31

The present work focuses on evaluating the ecological effects of hydropower-induced streamflow alteration within four catchments in the central Italian Alps. Downstream from the water diversions, minimum flows are released as an environmental protection measure, ranging approximately from 5 to 10% of the mean annual natural flow estimated at the intake section. Benthic macroinvertebrates as well as daily averaged streamflow were monitored for five years at twenty regulated stream reaches, and possible relationships between benthos-based stream quality metrics and environmental variables were investigated. Despite the non-negligible inter-site differences in basic streamflow metrics, benthic macroinvertebrate communities were generally dominated by few highly resilient taxa. The highest level of diversity was detected at sites where upstream minimum flow exceedance is higher and further anthropogenic pressures (other than hydropower) are lower. However, according to the current Italian normative index, the ecological quality was good/high on average at all of the investigated reaches, thus complying the Water Framework Directive standards. Copyright © 2017 Elsevier B.V. All rights reserved.

Divers-Operated Underwater Photogrammetry: Applications in the Study of Antarctic Benthos

NASA Astrophysics Data System (ADS)

Piazza, P.; Cummings, V.; Lohrer, D.; Marini, S.; Marriott, P.; Menna, F.; Nocerino, E.; Peirano, A.; Schiaparelli, S.

2018-05-01

Ecological studies about marine benthic communities received a major leap from the application of a variety of non-destructive sampling and mapping techniques based on underwater image and video recording. The well-established scientific diving practice consists in the acquisition of single path or `round-trip' over elongated transects, with the imaging device oriented in a nadir looking direction. As it may be expected, the application of automatic image processing procedures to data not specifically acquired for 3D modelling can be risky, especially if proper tools for assessing the quality of the produced results are not employed. This paper, born from an international cooperation, focuses on this topic, which is of great interest for ecological and monitoring benthic studies in Antarctica. Several video footages recorded from different scientific teams in different years are processed with an automatic photogrammetric procedure and salient statistical features are reported to critically analyse the derived results. As expected, the inclusion of oblique images from additional lateral strips may improve the expected accuracy in the object space, without altering too much the current video recording practices.

Marine biology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thurman, H.V.; Webber, H.H.

1984-01-01

This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the naturemore » of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index.« less

An annotated and revised checklist of pleurostome ciliates (Protista: Ciliophora: Litostomatea) from Slovakia, Central Europe.

PubMed

Vďačný, Peter; Rajter, L'ubomír

2014-02-04

Pleurostomatids are predatory ciliates, living especially in the periphyton and benthos of various freshwater and marine habitats. In the present work, we provide an annotated and revised checklist of this ciliate group from the territory of Slovakia. Altogether 29 pleurostome species belonging to five genera have been reported there: Acineria incurvata, Ac. punctata, Ac. uncinata, Amphileptus claparedii, Am. falcatus, Am. fusiformis, Am. parafusidens, Am. pleurosigma, Am. procerus, Am. punctatus, A. rotundus, Litonotus alpestris, Li. anguilla, Li. carinatus, Li. crystallinus, Li. cygnus, Li. fasciola, Li. fusidens, Li. hirundo, Li. lamella, Li. minisculus, Li. muscorum, Li. obtusus, Li. triqueter, Li. varsaviensis, Loxophyllum helus, Lo. meleagris, Lo. rostratum, and Siroloxophyllum utriculariae. We have catalogued these records providing the following data for each species: (1) author(s) and date of publication; (2) name(s) of the species as appeared in the publication(s) followed by chronologically listed references including relevant page(s) in literature; (3) nomenclatural and taxonomic notes if needed; (4) main morphological characters; (5) morphological data on Slovak populations if available; and (6) all faunistic records.

Cumberlandian Mollusk Conservation Program. Activity 8: analysis of macrofauna factors. [Conradilla caelata; quadrula intermedia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barr, W.C.; Ahlstedt, S.A.; Hickman, G.D.

1986-02-01

This study provides information that may be critical to the continued survival of the mussels Conradilla caelata and Qadrula intermedia in several rivers throughout the region. The biotic components of several river reaches that have populations of these endangered species were examined to determine what biotic attributes were different from those study reaches that did not have these mussels. In all cases the quantity and quality of the benthos would be considered adequate to sustain those consumers, in this case fish, that are necessary to assure continuation of the mussel community. If fish other than Etheostoma zonale (banded darter) aremore » determined to be acceptable hosts for either Conradilla caelata or Qadrula intermedia then there will probably be adequate numbers at each potential transplant site to accomplish reproduction. During this study we have determined that the benthic macrofauna at all sites is adequate, and supports a fish assemblage of considerable diversity and abundance, hence it is probable that adequate fish hosts are available to accommodate a complex mussel fauna.« less

[Residual level and ecological risk assessment of OCPs and PCBs in sediments of mudflat shellfish culturing areas in Ningbo, Zhejiang Province of East China].

PubMed

Zhu, Yun-Hai; You, Zhong-Jie; Shentu, Ji-Kang; Zhong, Hui-Ying; Chai, Li-Yue

2012-06-01

GC-ECD methods were adopted to determine the residual level of OCPs (including HCHs and DDTs) and PCBs in the surface sediments collected from mudflat shellfish culturing areas in Ningbo, with the sources of the OCPs and PCBs analyzed and the ecological risks of the residual OCPs and PCBs evaluated. The residual level of OCPs was 0.80-32.40 ng X g(-1), and that of PCBs was 3.20-33.33 ng X g(-1). The HCHs mainly came from long distance atmospheric transportation and historical residues, while the DDTs had new input at some sites, possibly coming from the application of dicofol. At most sites, there existed potential ecological risks of p, p'-DDT and DDTs, with strong indications in Qiangtou and Xidian where the residual level of p, p'-DDT was higher than the effect rang median (ERM), suggesting an ecological menace to the benthos. The residual PCBs at most sites were in low level ecological risk.

Response of rocky invertebrate diversity, structure and function to the vertical layering of vegetation

NASA Astrophysics Data System (ADS)

Bustamante, María; Tajadura, Javier; Gorostiaga, José María; Saiz-Salinas, José Ignacio

2014-06-01

Macroalgae comprise a prominent part of the rocky benthos where many invertebrates develop, and are believed to be undergoing severe declines worldwide. In order to investigate how the vegetation structure (crustose, basal and canopy layers) contributes to the diversity, structure and function of benthic invertebrates, a total of 31 subtidal transects were sampled along the northeast Atlantic coast of Spain. Significant positive relationships were found between the canopy layer and faunal abundance, taxonomic diversity and functional group diversity. Canopy forming algae were also related to epiphytic invertebrates, medium size forms, colonial strategy and suspensivores. By contrast, basal algae showed negative relationships with all variables tested except for detritivores. Multivariate multiple regression analyses (DISTLM) point to crustose as well as canopy layers as the best link between seaweeds and invertebrate assemblage structure. A close relationship was found between taxonomic and functional diversities. In general, low levels of taxonomic redundancy were detected for functional groups correlated with vegetation structure. A conceptual model based on the results is proposed, describing distinct stages of invertebrate assemblages in relation to the vertical structure of vegetation.

Time scales of change in the San Francisco Bay benthos

USGS Publications Warehouse

Nichols, F.H.; Thompson, J.K.

1985-01-01

Results from multi-year investigations in the San Francisco Bay estuary show that large abundance fluctuations within benthic macroinvertebrate populations reflect both (1) within-year periodicity of reproduction, recruitment, and mortality that is not necessarily coincident with seasonal changes of the environment (e.g., the annual temperature cycle), and (2) aperiodic density changes (often larger than within-year fluctuations) following random perturbations of the environment. Density peaks of the small, short-lived estuarine invertebrates that comprise the vast majority of individuals in the bay's relatively homogeneous benthic community normally occur between spring and autumn depending on the species, in large part a reflection of reproductive periodicity. However, because mild winters permit reproductive activity in some of the common species throughout much of the year, other factors are important to within-year density fluctuations in the community. Seasonally predictable changes in freshwater inflow, wind and tidal mixing, microalgal biomass, and sediment erosion/deposition patterns all contribute to observed seasonal changes in abundance. For example, the commonly observed decline in abundance during winter reflects both short-lived species that die after reproducing and the stress of winter conditions (e.g., inundation by less saline, sediment-laden water and the decline in both planktonic and benthic algal biomass - a direct source of food for the shallow-water benthos). On the other hand, data from several studies suggest that observed 'recruitment' and 'mortality' may in fact be the migration of juveniles and adults to and from study sites. For example, the common amphipod Ampelisca abdita apparently moves from shallow to deep water, or from up-estuary to down-estuary locations, coincident with periods of high river runoff in winter. Growth of individuals within the few studied species populations is also highly seasonal, and appears to be coincident with seasonal increases in the abundance of planktonic and/or benthic microalgae. Two multi-year studies have shown that, in addition to within-year periodicity, major restructuring of the benthic community can occur as a result of anomalous (usually climate-related) perturbations of the benthic habitat. For example, during wet years freshwater-intolerant species disappear from the upper part of the estuary and from shallow areas of the bay. During a two-year drought these same species colonized the extreme upper end of the estuary in large numbers. Other aperiodic perturbations include localized instances of sediment erosion or deposition and algal mat accumulations that greatly depress abundance. Additionally, there is evidence (observations that the clam Macoma balthica establishes large populations only when the amphipod A. abdita is not abundant) that species interactions can contribute greatly to interannual variations. Thus, while community composition may change little over the long term, year-to-year predictability of species abundances is low. ?? 1985 Dr W. Junk Publishers.

Effects of sea lamprey substrate modification and carcass nutrients on macroinvertebrate assemblages in a small Atlantic coastal stream

USGS Publications Warehouse

Weaver, Daniel M.; Coghlan, Stephen M.; Zydlewski, Joseph D.

2018-01-01

Aquatic macroinvertebrates respond to patch dynamics arising from interactions of physical and chemical disturbances across space and time. Anadromous fish, such as sea lamprey, Petromyzon marinus, migrate from the ocean and alter physical and chemical properties of recipient spawning streams. Sea lamprey disturb stream benthos physically through nest construction and spawning, and enrich food webs through nutrient deposition from decomposing carcasses. Sea lamprey spawning nests support greater macroinvertebrate abundance than adjacent reference areas, but concurrent effects of stream bed modification and nutrient supplementation have not been examined sequentially. We added carcasses and cleared substrate experimentally to mimic the physical disturbance and nutrient enrichment associated with lamprey spawning, and characterized effects on macroinvertebrate assemblage structure. We found that areas receiving cleared substrate and carcass nutrients were colonized largely by Simuliidae compared to upstream and downstream control areas that were colonized largely by Hydropsychidae, Philopotamidae, and Chironomidae. Environmental factors such as stream flow likely shape assemblages by physically constraining macroinvertebrate establishment and feeding. Our results indicate potential changes in macroinvertebrate assemblages from the physical and chemical changes to streams brought by spawning populations of sea lamprey.

Evaluation of brine disposal from the Bryan Mound site of the strategic petroleum reserve program. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Case, Robert J.; Chittenden, Jr, Mark E.; Harper, Jr, Donald E.

1981-01-01

On March 10, 1980, the Department of Energy's Strategic Petroleum Reserve Program began leaching the Bryan Mound salt dome and discharging the resulting brine into the coastal waters off Freeport, Texas. During the months of March and April, a team of scientists and engineers from Texas A and M University conducted an intensive environmental study of the area surrounding the diffuser site. A pipeline has been laid from the Bryan Mound site to a location 12.5 statute miles (20 km) offshore. The last 3060 ft (933 m) of this pipeline is a 52-port diffuser through which brine can be dischargedmore » at a maximum rate of 680,000 barrels per day. Initially, 16 ports were open which permitted a maximum discharge rate of 350,000 barrels per day and a continuous brine discharge was achieved on March 13, 1980. The purpose of this report is to describe the findings of the project team during the intensive postdisposal study period of March and April, 1980. The major areas of investigation are physical oceanography, analysis of the discharge plume, water and sediment quality, nekton, benthos, phytoplankton, zooplankton, and data management.« less

Macrobenthos and megabenthos responses to long-term, large-scale hypoxia on the Louisiana continental shelf.

PubMed

Briggs, Kevin B; Craig, J Kevin; Shivarudrappa, S; Richards, T M

2017-02-01

The macrobenthos and megabenthos responses to long-term, recurring hypoxia on the Louisiana continental shelf were compared at four locations with different historical (2000-2010) episodes of annual exposure to bottom-water hypoxia. Measurements of abundance, biomass, species diversity, and community composition of the two size classes of benthos suggested that the macrobenthic response is driven chiefly by tolerance to hypoxia, whereas the megabenthic response was affected by the ability to migrate and the availability/unavailability of macrobenthos prey at the sediment surface. The site exposed to the historically lowest average bottom-water dissolved oxygen (BWDO) concentration exhibited the lowest species diversity for macrobenthos and the highest species diversity for megabenthos, exemplifying the differential effects of hypoxia on different size classes. The high diversity and smaller average size of the megabenthos at the lowest DO site was due to high abundance of invertebrates and a preponderance of small, less vagile fishes that appeared to remain in the area after larger dominant sciaenids had presumably emigrated. The average size and the depth of habitation in the sediment of macrobenthos prey may have also influenced the abundance and biomass of megabenthos foragers. Published by Elsevier Ltd.

Decoupling of body-plan diversification and ecological structuring during the Ediacaran–Cambrian transition: evolutionary and geobiological feedbacks

PubMed Central

Mángano, M. Gabriela; Buatois, Luis A.

2014-01-01

The rapid appearance of bilaterian clades at the beginning of the Phanerozoic is one of the most intriguing topics in macroevolution. However, the complex feedbacks between diversification and ecological interactions are still poorly understood. Here, we show that a systematic and comprehensive analysis of the trace-fossil record of the Ediacaran–Cambrian transition indicates that body-plan diversification and ecological structuring were decoupled. The appearance of a wide repertoire of behavioural strategies and body plans occurred by the Fortunian. However, a major shift in benthic ecological structure, recording the establishment of a suspension-feeder infauna, increased complexity of the trophic web, and coupling of benthos and plankton took place during Cambrian Stage 2. Both phases were accompanied by different styles of ecosystem engineering, but only the second one resulted in the establishment of the Phanerozoic-style ecology. In turn, the suspension-feeding infauna may have been the ecological drivers of a further diversification of deposit-feeding strategies by Cambrian Stage 3, favouring an ecological spillover scenario. Trace-fossil information strongly supports the Cambrian explosion, but allows for a short time of phylogenetic fuse during the terminal Ediacaran–Fortunian. PMID:24523279

Diversity and distribution of Dorippid Crabs (Brachyura: Dorippidae) in East Coast of Lampung, Indonesia

NASA Astrophysics Data System (ADS)

Zairion; Hakim, AA; Mashar, A.; Fahrudin, A.; Adrianto, L.; Widigdo, B.; Wardiatno, Y.

2018-05-01

Dorippid crabs (Brachyura: Dorippidae) commonly live in sand or mud substrate at shallow coastal water. These crabs are a macro-benthos, mostly found in tropic, have no economic value, but have high abundance in blue swimming crab habitat and lack information in Indonesia. This study aims to determine diversity and species distribution of dorippid crabs in East Coast of Lampung, Indonesia. This study was conducted on March-April 2017 in seven locations along coastal area (i.e. Labuhan Maringgai, Kuala Penet, Sekopong, Wako, Seputih, Sungai Burung, and Kuala Teladas). The specimen was collected from the blue swimming crab gill-net fishery as by-catch. Each location found by this family was noted at coordinate point at satellite imagery map and processed using ArcGIS. Two species have been found, there are Dorippe quadridens and Dorippoides facchino. Both species were found at every location, except D. quadridens at Sungai Burung as well as D. facchino in Sekopong. There are 74% among the sample of fishermen caught D. quadridens in those areas with an average number of 36 individuals and weight of 959 grams. While, 40% of fishermen caught D. facchino with an average number of 17 individuals and weight 152 grams.

First laboratory insight on the behavioral rhythms of the bathyal crab Geryon longipes

NASA Astrophysics Data System (ADS)

Nuñez, J. D.; Sbragaglia, V.; García, J. A.; Company, J. B.; Aguzzi, J.

2016-10-01

The deep sea is the largest and at the same time least explored biome on Earth, but quantitative studies on the behavior of bathyal organisms are scarce because of the intrinsic difficulties related to in situ observations and maintaining animals in aquaria. In this study, we reported, for the first time, laboratory observations on locomotor rhythms and other behavioral observations (i.e. feeding, exploring and self-grooming) for the bathyal crab Geryon longipes. Crabs were collected on the middle-lower slope (720-1750 m) off the coast of Blanes (Spain). Inertial (18 h) water currents and monochromatic blue (i.e. 470 nm) light-darkness (24 h) cycles were simulated in two different experiments in flume tanks endowed with burrows. Both cycles were simulated in order to investigate activity rhythms regulation in Mediterranean deep-sea benthos. Crabs showed rhythmic locomotor activity synchronized to both water currents and light-darkness cycles. In general terms, feeding and exploring behaviors also followed the same pattern. Results presented here indicate the importance of local inertial (18 h) periodicity of water currents at the seabed as a temporal cue regulating the behavior of bathyal benthic fauna in all continental margin areas where the effects of tides is negligible.

Chronic toxicity of phenanthrene to the marine polychaete worm, Nereis (Neanthes) arenaceodentata

DOE Office of Scientific and Technical Information (OSTI.GOV)

Emery, V.L. Jr.; Dillon, T.M.

1996-02-01

Polycyclic aromatic hydrocarbons (PAHs) are widely distributed in the environment. While environmental concentrations are generally below acutely, lethal levels, chronic, low level exposures may result in subtle sublethal effects. PAHs accumulate in bottom sediments and may represent a hazard to the benthos. Polychaetes are important members of this community. The objective of this study is to evaluate the chronic sublethal effects of one PAH, phenanthrene (PHN), on the polychaete worm, Nereis arenaceodentata. PHN was selected because of its high toxicity to marine invertebrates relative to other PAHs. The response of bivalves to heavy metals and other toxins has usually beenmore » determined by observing valve position. Since mussels close their valves to avoid noxious stimuli, experimental delivery of chemicals is uncertain. To obtain constant results. Preston employed plastic spacers to hold the valves apart. This obviates the observation of valve position as an index of response, and some other method is required. Electromyography of intact mussels is one such index, and is shown to be a simple, effective and quantitative measurement of activity. Experiments are reported on the effects of added mercury on salt water and fresh water species. Parts of this Nvork have appeared in brief form.« less

Modelling and forecasting long-term dynamics of Western Baltic macrobenthic fauna in relation to climate signals and environmental change

NASA Astrophysics Data System (ADS)

Gröger, Joachim; Rumohr, Heye

2006-05-01

Long-term macrobenthos data from Kiel Bight in the Western Baltic collected between 1968 and 2000 have been correlated with the winter NAO index (North Atlantic Oscillation Index) and other environmental data such as temperature, salinity and oxygen content in the bottom water in order to detect systematic patterns related to so far unexplained abiotic signals in the dynamics of zoobenthic species assemblages. The benthos data come from a cluster of five stations (Süderfahrt/ Millionenviertel) in Kiel Bay. Our investigations concentrated on the macrobenthic dynamics with a focus on the number of species m - 2 (species richness). Using logarithms and the time series analysis approach of Box/Jenkins (ARIMA modelling, transfer function modelling) it was shown that species richness was strongly influenced by the winter NAO (adjusted for a linear time trend within the 1968-2000 period) and salinity (with a shift/lag of four years). Bootstrapping experiments (i.e. sampling from the error process) and analysis of prediction power (by means of the one- or more-years leaving-out method) showed that the parameter estimates behaved in a stable way, leading to a relatively robust model.

Managing an invasive corallimorph at Palmyra Atoll National Wildlife Refuge, Line Islands, Central Pacific

USGS Publications Warehouse

Work, Thierry M.; Aeby, Greta S.; Neal, Benjamin P.; Price, Nichole N.; Conklin, Eric; Pollock, Amanda

2018-01-01

In 2007, a phase shift from corals to corallimorpharians (CM) centered around a shipwreck was documented at Palmyra Atoll, Line Islands. Subsequent surveys revealed CM to be overgrowing the reef benthos, including corals and coralline algae, potentially placing coral ecosystems in the atoll at risk. This prompted the U.S. Fish and Wildlife Service, the lead management agency of the atoll, to remove the shipwreck. Subsequent surveys showed reductions in CM around the ship impact site. We explain patterns of spread of the CM in terms of both life history and local currents and show with a pilot study that pulverized bleach may be an effective tool to eradicate CM on a local scale. If applied strategically, particularly in heavily infested (> 66% cover) areas, active intervention such as this could be an effective management tool to reduce CM impact on localized areas and decrease colonization rate of remaining reefs. This is the first documentation of the response of an invasive cnidarian to shipwreck removal. While this was a singular event in Palmyra, the spatial and temporal patterns of this invasion and the eradications lessons described herein, are useful for anticipating and controlling similar situations elsewhere.

Fish and invertebrate flow-biology relationships to support the determination of ecological flows for North Carolina

USGS Publications Warehouse

Phelan, Jennifer; Cuffney, Thomas F.; Patterson, Lauren A.; Eddy, Michele; Dykes, Robert; Pearsall, Sam; Goudreau, Chris; Mead, Jim; Tarver, Fred

2017-01-01

A method was developed to characterize fish and invertebrate responses to flow alteration in the state of North Carolina. This method involved using 80th percentile linear quantile regressions to relate six flow metrics to the diversity of riffle-run fish and benthic Ephemeroptera, Plecoptera, and Trichoptera (EPT) richness. All twelve flow-biology relationships were found to be significant, with both benthos and fish showing negative responses to ecodeficits and reductions in flow. The responses of benthic richness to reduced flows were consistent and generally greater than that of fish diversity. However, the riffle-run fish guild showed the greatest reductions in diversity in response to summer ecodeficits. The directional consistency and differential seasonal sensitivities of fish and invertebrates to reductions in flow highlight the need to consider seasonality when managing flows. In addition, all relationships were linear, and therefore do not provide clear thresholds to support ecological flow determinations and flow prescriptions to prevent the degradation of fish and invertebrate communities in North Carolina rivers and streams. A method of setting ecological flows based on the magnitude of change in biological condition that is acceptable to society is explored.

High frequency sampling of the 1984 spring bloom within the mid-Atlantic Bight: Synoptic shipboard, aircraft, and in situ perspectives of the SEEP-I experiment

NASA Technical Reports Server (NTRS)

Walsh, J. J.; Wirick, C. D.; Pietrafesa, L. J.; Whitledge, T. E.; Hoge, F. E.; Swift, R. N.

1986-01-01

Moorings of current meters, thermistors, transmissometers, and fluorometers on the mid-Atlantic shelf, south of Long Island, suggest a cumulative seaward export of perhaps 0.35 g C/sq m/day between the 80 and 120 m isobaths during February-April 1984. Such a horizontal loss of algal carbon over the lower third of the water column would be 23 to 78% of the March-April 1984 primary production. This physical carbon loss is similar to daily grazing losses from zooplankton of 32-40% of the algal fixation of carbon. Metabolic demands of the benthos could be met by just the estimated fecal pellet flux, without direct consumption of algal carbon, while bacterioplankton needs could be served by excretory release of dissolved organic matter during photosynthesis. Sediment traps tethered 10 m off the bottom at the 120 m isobath and 50 m above the 500 m isobath caught as much as 0.16 to 0.26 g C /sq m/day during March-April 1984, in reasonable agreement with the flux estimated from the other moored instruments.

Chronic and intensive bottom trawling impairs deep-sea biodiversity and ecosystem functioning

PubMed Central

Pusceddu, Antonio; Bianchelli, Silvia; Martín, Jacobo; Puig, Pere; Palanques, Albert; Masqué, Pere; Danovaro, Roberto

2014-01-01

Bottom trawling has many impacts on marine ecosystems, including seafood stock impoverishment, benthos mortality, and sediment resuspension. Historical records of this fishing practice date back to the mid-1300s. Trawling became a widespread practice in the late 19th century, and it is now progressively expanding to greater depths, with the concerns about its sustainability that emerged during the first half of the 20th century now increasing. We show here that compared with untrawled areas, chronically trawled sediments along the continental slope of the north-western Mediterranean Sea are characterized by significant decreases in organic matter content (up to 52%), slower organic carbon turnover (ca. 37%), and reduced meiofauna abundance (80%), biodiversity (50%), and nematode species richness (25%). We estimate that the organic carbon removed daily by trawling in the region under scrutiny represents as much as 60–100% of the input flux. We anticipate that such an impact is causing the degradation of deep-sea sedimentary habitats and an infaunal depauperation. With deep-sea trawling currently conducted along most continental margins, we conclude that trawling represents a major threat to the deep seafloor ecosystem at the global scale. PMID:24843122

Decoupling of body-plan diversification and ecological structuring during the Ediacaran-Cambrian transition: evolutionary and geobiological feedbacks.

PubMed

Mángano, M Gabriela; Buatois, Luis A

2014-04-07

The rapid appearance of bilaterian clades at the beginning of the Phanerozoic is one of the most intriguing topics in macroevolution. However, the complex feedbacks between diversification and ecological interactions are still poorly understood. Here, we show that a systematic and comprehensive analysis of the trace-fossil record of the Ediacaran-Cambrian transition indicates that body-plan diversification and ecological structuring were decoupled. The appearance of a wide repertoire of behavioural strategies and body plans occurred by the Fortunian. However, a major shift in benthic ecological structure, recording the establishment of a suspension-feeder infauna, increased complexity of the trophic web, and coupling of benthos and plankton took place during Cambrian Stage 2. Both phases were accompanied by different styles of ecosystem engineering, but only the second one resulted in the establishment of the Phanerozoic-style ecology. In turn, the suspension-feeding infauna may have been the ecological drivers of a further diversification of deposit-feeding strategies by Cambrian Stage 3, favouring an ecological spillover scenario. Trace-fossil information strongly supports the Cambrian explosion, but allows for a short time of phylogenetic fuse during the terminal Ediacaran-Fortunian.

Trophic amplification of climate warming

PubMed Central

Kirby, Richard R.; Beaugrand, Gregory

2009-01-01

Ecosystems can alternate suddenly between contrasting persistent states due to internal processes or external drivers. It is important to understand the mechanisms by which these shifts occur, especially in exploited ecosystems. There have been several abrupt marine ecosystem shifts attributed either to fishing, recent climate change or a combination of these two drivers. We show that temperature has been an important driver of the trophodynamics of the North Sea, a heavily fished marine ecosystem, for nearly 50 years and that a recent pronounced change in temperature established a new ecosystem dynamic regime through a series of internal mechanisms. Using an end-to-end ecosystem approach that included primary producers, primary, secondary and tertiary consumers, and detritivores, we found that temperature modified the relationships among species through nonlinearities in the ecosystem involving ecological thresholds and trophic amplifications. Trophic amplification provides an alternative mechanism to positive feedback to drive an ecosystem towards a new dynamic regime, which in this case favours jellyfish in the plankton and decapods and detritivores in the benthos. Although overfishing is often held responsible for marine ecosystem degeneration, temperature can clearly bring about similar effects. Our results are relevant to ecosystem-based fisheries management (EBFM), seen as the way forward to manage exploited marine ecosystems. PMID:19740882

Risk assessment for produced water discharges to Louisiana Open Bays

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meinhold, A.F.; DePhillips, M.P.; Holtzman, S.

Data were collected prior to termination of discharge at three sites (including two open bay sites at Delacroix Island and Bay De Chene) for the risk assessments. The Delacroix Island Oil and Gas Field has been in production since the first well drilling in 1940; the Bay De Chene Field, since 1942. Concentrations of 226Ra, 228Ra, 210Po, and 228Th were measured in discharges. Radium conc. were measured in fish and shellfish tissues. Sediment PAH and metal conc. were also available. Benthos sampling was conducted. A survey of fishermen was conducted. The tiered risk assessment showed that human health risks frommore » radium in produced water appear to be small; ecological risk from radium and other radionuclides in produced water also appear small. Many of the chemical contaminants discharged to open Louisiana bays appear to present little human health or ecological risk. A conservative screening analysis suggested potential risks to human health from Hg and Pb and a potential risk to ecological receptors from total effluent, Sb, Cd, Cu, Pb, Ni, Ag, Zn, and phenol in the water column and PAHs in sediment; quantitiative risk assessments are being done for these contaminants.« less

A quantitative analysis of fishing impacts on shelf-sea benthos.

PubMed

Collie, Jeremy S; Hall, Stephen J; Kaiser, Michel J; Poiner, Ian R

2000-09-01

1. The effects of towed bottom-fishing gear on benthic communities is the subject of heated debate, but the generality of trawl effects with respect to gear and habitat types is poorly understood. To address this deficiency we undertook a meta-analysis of 39 published fishing impact studies. 2. Our analysis shows that inter-tidal dredging and scallop dredging have the greatest initial effects on benthic biota, while trawling has less effect. Fauna in stable gravel, mud and biogenic habitats are more adversely affected than those in less consolidated coarse sediments. 3. Recovery rate appears most rapid in these less physically stable habitats, which are generally inhabited by more opportunistic species. However, defined areas that are fished in excess of three times per year (as occurs in parts of the North Sea and Georges Bank) are likely to be maintained in a permanently altered state. 4. We conclude that intuition about how fishing ought to affect benthic communities is generally supported, but that there are substantial gaps in the available data, which urgently need to be filled. In particular, data on impacts and recovery of epifaunal structure-forming benthic communities are badly needed.

Bounding the error on bottom estimation for multi-angle swath bathymetry sonar

NASA Astrophysics Data System (ADS)

Mullins, Geoff K.; Bird, John S.

2005-04-01

With the recent introduction of multi-angle swath bathymetry (MASB) sonar to the commercial marketplace (e.g., Benthos Inc., C3D sonar, 2004), additions must be made to the current sonar lexicon. The correct interpretation of measurements made with MASB sonar, which uses filled transducer arrays to compute angle-of-arrival information (AOA) from backscattered signal, is essential not only for mapping, but for applications such as statistical bottom classification. In this paper it is shown that aside from uncorrelated channel to channel noise, there exists a tradeoff between effects that govern the error bounds on bottom estimation for surfaces having shallow grazing angle and surfaces distributed along a radial arc centered at the transducer. In the first case, as the bottom aligns with the radial direction to the receiver, footprint shift and shallow grazing angle effects dominate the uncertainty in physical bottom position (surface aligns along a single AOA). Alternatively, if signal from a radial arc arrives, a single AOA is usually estimated (not necessarily at the average location of the surface). Through theoretical treatment, simulation, and field measurements, the aforementioned factors affecting MASB bottom mapping are examined. [Work supported by NSERC.

Diel feeding ecology of Slimy Sculpin in a tributary to Skaneateles Lake, New York

USGS Publications Warehouse

Chalupnicki, Marc A.; Johnson, James H.

2016-01-01

Interactions among the benthic community are typically overlooked but play an important role in fish community dynamics. We examined the diel feeding ecology of Slimy Sculpin (Cottus cognatus) from Grout Brook, a tributary to Skaneateles Lake. Of the six time periods examined, Slimy Sculpin consumed the least during the nighttime (2400 h and 0400 h). Chironomids were the major prey consumed during all time periods except for 2400 h when ephemeropterans were the major prey consumed. There was a moderate preference by Slimy Sculpin for food from the benthos (0.59 ± 0.06) with Diptera (Chironomids), Ephemeroptera (Baetidae), and Trichoptera (Brachycentridae) representing the major taxa. Slimy Sculpin appear to be opportunistic feeders selecting what is most available in the brook. Index of fullness was variable and averaged 1.15% across the diel cycle. Daily ration was measured as a function of fish dry body weight and ranged from 0.12 to 0.22. Estimates of daily consumption ranged from 0.007% to 4.0% of body weight, which corresponds to reports for other species. These findings have application in gauging the relative importance of Slimy Sculpin in streams where highly valued salmonid species also occur.

Model of a coral reef ecosystem

NASA Astrophysics Data System (ADS)

Atkinson, Marlin J.; Grigg, Richard W.

1984-08-01

The ECOPATH model for French Frigate Shoals estimates the benthic plant production (net primary production in kg wet weight) required to support the atoll food chain. In this section we estimate the benthic net primary production and net community production of the atoll based on metabolism studies of reef flat, knolls, and lagoon communities at French Frigate Shoals Hawaii. Community metabolism was measured during winter and summer. The reef communities at French Frigate Shoals exhibited patterns and rates of organic carbon production and calcification similar to other reefs in the world. The estimate of net primary production is 6.1·106 kg wet weight km-2 year-1±50%, a value remarkably close to the estimate by the ECOPATH model of 4.3·106 kg wet weight km-2 year-1. Our estimate of net community production or the amount of carbon not consumed by the benthos was high; approximately 15% of the net primary production. Model results indicate that about 5% of net primary production is passed up the food chain to mobile predators. This suggests about 10% of net primary production (˜6% of gross primary production) may be permanently lost to the system via sediment burial or export offshore.

Growth, feeding and reproduction of the catfish Eremophilus mutisii (Pisces: Trichomycteridae), from artificial reservoirs in Colombia.

PubMed

Pinilla, Gabriel; Abril, Maritza; González, Esperanza

2006-06-01

The catfish, Eremophilus mutisii, was cultured under different densities in artificial rainfall reservoirs at Caldas, Boyacá, Colombia. At capture, the average total length of the animals was 10 cm and the weight ranged between 9 and 10 g. These fish were in initial stages of sexual development. After a year in the reservoirs, they had increased in length and weight as follows (densities in parentheses): 5.22 cm and 27.23 g (0.5 individuals/m2); 1.98 cm and 8.79 g (1 individual/m2), and 2.45 cm and 0.82 g (2 individuals/m2). They were at the early stages of sexual maturity, and their condition factor fluctuated between 0.61 and 0.96. They preferably ingested insect larvae that were found in benthic and littoral communities of the reservoirs. The benthos was dominated by ephippia of Daphnia, lumbriculids, and chironomid larvae. The biomass of benthic organisms ranged between 0.1126 and 1.3847 g/m2. In the littoral community aquatic insects were the most important component, especially the hemipterans. The biomass of the littoral fauna ranged between 0.14 and 4.05 g/m2.

Seamount ecology and dynamics: A multidisciplinary data set from repeated surveys at different seamounts in the Northeast Atlantic and Mediterranean (2003 - 2013).

NASA Astrophysics Data System (ADS)

Mohn, C.; Christiansen, B.; Denda, A.; George, K. H.; Kaufmann, M.; Maranhão, M.; Martin, B.; Metzger, T.; Peine, F.; Schuster, A.; Springer, B.; Stefanowitsch, B.; Turnewitsch, R.; Wehrmann, H.

2016-02-01

Seamounts are amongst the most common physiographic open ocean systems, but remoteness and geographic complexity have limited the number of integrated and multidisciplinary seamount surveys in the past. As a consequence, important aspects of seamount ecology and dynamics remain poorly studied. Here we present a multi-parameter data set from individual and repeated seamount surveys conducted at different sites in the Northeast Atlantic and Eastern Mediterranean between 2003 and 2013. The main objective of these surveys was to establish a collection of ecosystem relevant descriptors and to develop a better understanding of seamount ecosystem composition and variability in different dynamical and bio-geographic environments. Measurements were conducted at four seamounts in the Northeast Atlantic (Ampère, Sedlo, Seine, Senghor) and two seamounts in the Eastern Mediterranean (Anaximenes, Eratosthenes). The data set comprises records from a total number of 11 cruises including physical oceanography (temperature, salinity, pressure, currents), biology (phytoplankton, zooplankton, fish, benthos) and biogeochemistry (sedimentary particle dynamics, carbon flux). The resulting multi-disciplinary data collection provides a unique opportunity for comparative studies of seamount ecosystem structure and dynamics between different physical, biological and biogeochemical regimes

Effects of natural and human-induced hypoxia on coastal benthos

NASA Astrophysics Data System (ADS)

Levin, L. A.; Ekau, W.; Gooday, A. J.; Jorissen, F.; Middelburg, J. J.; Naqvi, S. W. A.; Neira, C.; Rabalais, N. N.; Zhang, J.

2009-10-01

Coastal hypoxia (defined here as <1.42 ml L-1; 62.5 μM; 2 mg L-1, approx. 30% oxygen saturation) develops seasonally in many estuaries, fjords, and along open coasts as a result of natural upwelling or from anthropogenic eutrophication induced by riverine nutrient inputs. Permanent hypoxia occurs naturally in some isolated seas and marine basins as well as in open slope oxygen minimum zones. Responses of benthos to hypoxia depend on the duration, predictability, and intensity of oxygen depletion and on whether H2S is formed. Under suboxic conditions, large mats of filamentous sulfide oxidizing bacteria cover the seabed and consume sulfide. They are hypothesized to provide a detoxified microhabitat for eukaryotic benthic communities. Calcareous foraminiferans and nematodes are particularly tolerant of low oxygen concentrations and may attain high densities and dominance, often in association with microbial mats. When oxygen is sufficient to support metazoans, small, soft-bodied invertebrates (typically annelids), often with short generation times and elaborate branchial structures, predominate. Large taxa are more sensitive than small taxa to hypoxia. Crustaceans and echinoderms are typically more sensitive to hypoxia, with lower oxygen thresholds, than annelids, sipunculans, molluscs and cnidarians. Mobile fish and shellfish will migrate away from low-oxygen areas. Within a species, early life stages may be more subject to oxygen stress than older life stages. Hypoxia alters both the structure and function of benthic communities, but effects may differ with regional hypoxia history. Human-caused hypoxia is generally linked to eutrophication, and occurs adjacent to watersheds with large populations or agricultural activities. Many occurrences are seasonal, within estuaries, fjords or enclosed seas of the North Atlantic and the NW Pacific Oceans. Benthic faunal responses, elicited at oxygen levels below 2 ml L-1, typically involve avoidance or mortality of large species and elevated abundances of enrichment opportunists, sometimes prior to population crashes. Areas of low oxygen persist seasonally or continuously beneath upwelling regions, associated with the upper parts of oxygen minimum zones (SE Pacific, W Africa, N Indian Ocean). These have a distribution largely distinct from eutrophic areas and support a resident fauna that is adapted to survive and reproduce at oxygen concentrations <0.5 ml L-1. Under both natural and eutrophication-caused hypoxia there is loss of diversity, through attrition of intolerant species and elevated dominance, as well as reductions in body size. These shifts in species composition and diversity yield altered trophic structure, energy flow pathways, and corresponding ecosystem services such as production, organic matter cycling and organic C burial. Increasingly the influences of nature and humans interact to generate or exacerbate hypoxia. A warmer ocean is more stratified, holds less oxygen, and may experience greater advection of oxygen-poor source waters, making new regions subject to hypoxia. Future understanding of benthic responses to hypoxia must be established in the context of global climate change and other human influences such as overfishing, pollution, disease, habitat loss, and species invasions.

NW Black Sea ecosystems recovery from former severe seasonal hypoxia and effect on macrofauna

NASA Astrophysics Data System (ADS)

Gomoiu, Marian-Traian; Begun, Tatiana; Teaca, Adrian

2013-04-01

The benthos researches carried out in the last decade on the NW Black Sea shelf established the transitional process of the bottom communities, from the severe disturbed state resulted from seasonal hypoxia of high eutrophication from 1970-2000 period towards a new state. The authors, with their expertise achieved in the framework of several national and EU FP6&7 projects (SESAME, HYPOX, PERSEUS), analyzing more than 600 quantitative samples, consider the benthic associations influenced mainly by the Danube River discharge being characterized as follows: • decrease in the specific diversity (e.g. Mollusca - from 170 species in the 1960s - 1970s to 70 species in the present in NW Black Sea); • loss or diminishing of some habitat areas (typical habitat with Zostera, Phyllophora, Cystoseira, Barnea, Donacilla etc.); • increase in the numeric abundance and biomass of some specific benthic populations (Melinna, Alitta, Dipolydora etc.); • loss or reduction of some specific populations (Abra prismatica, Spisula subtruncata, Chamelia gallina etc.); • replacement of some strong and quite large benthic populations by metapopulation of small extension; • diminution of the biofilter strength by reduction of the filter - feeder populations; • qualitative and quantitative worsening of benthic biological resources, especially molluscs - forms playing an important ecological part and with great economic importance (mussel Mytilus galloprovincialis, soft-shell clam Mya arenaria, veined rapa whelk Rapana venosa); • thriving of opportunistic forms (especially worms populations causing sediment bioturbation - Melinna palmata, Heteromastus filiformis) and, temporarily, some exotic species recently pervading Black Sea (Mya, Anadara, Rapana etc.); • great quantitative fluctuations of all benthic populations; • occurrence of some weak sing of ecosystem recovery. However, recovery of the benthic ecosystem appears to be less certain although an improvement on regeneration of macrophytobenthos and macrozoobenthos is suggested by the available data. The process of recovery of the Black Sea will take a long time and will require the implementation of all measures envisaged by the Black Sea Strategic Action Plan as well as some future provisions. The process will be further complicated by the fact that scientific knowledge and information on many processes and phenomena, which are needed for policy and decision making, are missing. The opinion of authors concerning the future conservation of the Black Sea biodiversity in the context of climate change and the actual state of socio-economic system of the Black Sea Region (environment-related science and policy) is that to have in mind the following key aspects: • facts are uncertain (lack of knowledge of the impacts of some mitigation and adaptation measures on biodiversity as a whole and some habitats or taxa in particular and the transfer of "best practices" should be undertaken with caution in order to ensure their applicability to a new situation); • natural and economic values in dispute, • stakes high and decisions urgent. Keywords: Black Sea, benthos, ecological state.

A newly identified left-right asymmetry in larval sea urchins.

PubMed

Hodin, Jason; Lutek, Keegan; Heyland, Andreas

2016-08-01

Directional asymmetry (DA) in body form is a widespread phenomenon in animals and plants alike, and a functional understanding of such asymmetries can offer insights into the ways in which ecology and development interface to drive evolution. Echinoids (sea urchins, sand dollars and their kin) with planktotrophic development have a bilaterally symmetrical feeding pluteus larva that undergoes a dramatic metamorphosis into a pentameral juvenile that enters the benthos at settlement. The earliest stage of this transformation involves a DA: a left-side invagination in mid-stage larvae leads to the formation of the oral field of the juvenile via a directionally asymmetric structure called the echinus rudiment. Here, we show for the first time in two echinoid species that there is a corresponding DA in the overall shape of the larva: late-stage plutei have consistently shorter arms specifically on the rudiment (left) side. We then demonstrate a mechanistic connection between the rudiment and arm length asymmetries by examining rare, anomalous purple urchin larvae that have rudiments on both the left and the right side. Our data suggest that this asymmetry is probably a broadly shared feature characterizing ontogeny in the class Echinoidea. We propose several functional hypotheses-including developmental constraints and water column stability-to account for this newly identified asymmetry.

Changing patterns in coastal cutthroat trout (Oncorhynchus clarki clarki) diet and prey in a gradient of deciduous canopies

USGS Publications Warehouse

Romero, N.; Gresswell, R.E.; Li, J.L.

2005-01-01

We examined the influence of riparian vegetation patterns on coastal cutthroat trout Oncorhynchus clarki clarki diet and prey from the summer of 2001 through the spring of 2002. Benthic and drifting invertebrates, allochthonous prey, and fish diet were collected from deciduous, conifer, and mixed sections of three Oregon coastal watersheds. The nine sites were best characterized as a continuum of deciduous cover, and shrub cover and proportion of deciduous canopy were positively correlated (r = 0.74). Most sources of prey (benthic invertebrate biomass, allochthonous invertebrate inputs, aquatic and total invertebrate drift) and aquatic prey ingested by coastal cutthroat trout were greater where shrub cover was more abundant. Only aquatic drift, total invertebrate drift, and allochthonous invertebrates were positively correlated with deciduous vegetation. Compared with coniferous sites, allochthonous invertebrates under deciduous and mixed canopies were almost 30% more abundant. Stream discharge likely influenced seasonal fluxes of aquatic invertebrate biomass in the benthos and drift. Aquatic insects dominated gut contents during this study; however, terrestrial prey were most common in the diet during the summer and fall. In the Pacific northwest, systematic removal of deciduous riparian vegetation to promote conifers may have unintended consequences on food resources of coastal cutthroat trout and aquatic food web interactions. ?? 2005 NRC.

DeepPIV: Particle image velocimetry measurements using deep-sea, remotely operated vehicles

NASA Astrophysics Data System (ADS)

Katija, Kakani; Sherman, Alana; Graves, Dale; Klimov, Denis; Kecy, Chad; Robison, Bruce

2015-11-01

The midwater region of the ocean (below the euphotic zone and above the benthos) is one of the largest ecosystems on our planet, yet remains one of the least explored. Little-known marine organisms that inhabit midwater have developed life strategies that contribute to their evolutionary success, and may inspire engineering solutions for societally relevant challenges. Although significant advances in underwater vehicle technologies have improved access to midwater, small-scale, in situ fluid mechanics measurement methods that seek to quantify the interactions that midwater organisms have with their physical environment are lacking. Here we present DeepPIV, an instrumentation package affixed to remotely operated vehicles that quantifies fluid motions from the surface of the ocean down to 4000 m depths. Utilizing ambient suspended particulate, fluid-structure interactions are evaluated on a range of marine organisms in midwater. Initial science targets include larvaceans, biological equivalents of flapping flexible foils, that create mucus houses to filter food. Little is known about the structure of these mucus houses and the function they play in selectively filtering particles, and these dynamics can serve as particle-mucus models for human health. Using DeepPIV, we reveal the complex structures and flows generated within larvacean mucus houses, and elucidate how these structures function. Funding is gratefully acknowledged from the Packard Foundation.

Composition and abundance of epibenthic-sledge catches in the South Polar Front of the Atlantic

NASA Astrophysics Data System (ADS)

Brandt, A.; Havermans, C.; Janussen, D.; Jörger, K. M.; Meyer-Löbbecke, A.; Schnurr, S.; Schüller, M.; Schwabe, E.; Brandão, S. N.; Würzberg, L.

2014-10-01

An epibenthic sledge (EBS) was deployed at seven different deep-sea stations along the South Polar Front of the Atlantic in order to explore the composition and abundance of macrofaunal organisms and to identify the most abundant taxa in this transition zone to the Southern Ocean. In total 3,130 specimens were sampled by means of the EBS on board of RV Polarstern during the expedition ANT-XXVIII/3 in the austral summer of 2012. Benthic and suprabenthic Crustacea occurred to be most frequent in the samples. Among those, copepods were by far most numerous, with 1,585 specimens followed by the peracarid taxa Isopoda (236 ind.), Amphipoda (103 ind.), Tanaidacea (78 ind.) and Cumacea (50 ind.). Annelida were represented by a high number of specimens belonging to different polychaete taxa (404 ind.). The molluscan fauna was clearly dominated by Bivalvia (255 ind.), followed in numbers of specimens by Gastropoda (47 ind.). The deep-sea benthos sampled along the Southern Polar Front occurred in surprisingly low abundances, contrasting the largely high surface productivity of the area. Numbers of specimens across different macrofaunal taxa and especially of peracarid crustaceans underscored by far those from South Ocean sites at higher latitudes in the Weddell Sea.

A newly identified left–right asymmetry in larval sea urchins

PubMed Central

Hodin, Jason; Lutek, Keegan

2016-01-01

Directional asymmetry (DA) in body form is a widespread phenomenon in animals and plants alike, and a functional understanding of such asymmetries can offer insights into the ways in which ecology and development interface to drive evolution. Echinoids (sea urchins, sand dollars and their kin) with planktotrophic development have a bilaterally symmetrical feeding pluteus larva that undergoes a dramatic metamorphosis into a pentameral juvenile that enters the benthos at settlement. The earliest stage of this transformation involves a DA: a left-side invagination in mid-stage larvae leads to the formation of the oral field of the juvenile via a directionally asymmetric structure called the echinus rudiment. Here, we show for the first time in two echinoid species that there is a corresponding DA in the overall shape of the larva: late-stage plutei have consistently shorter arms specifically on the rudiment (left) side. We then demonstrate a mechanistic connection between the rudiment and arm length asymmetries by examining rare, anomalous purple urchin larvae that have rudiments on both the left and the right side. Our data suggest that this asymmetry is probably a broadly shared feature characterizing ontogeny in the class Echinoidea. We propose several functional hypotheses—including developmental constraints and water column stability—to account for this newly identified asymmetry. PMID:27853591

The response of a boreal deep-sea sponge holobiont to acute thermal stress.

PubMed

Strand, R; Whalan, S; Webster, N S; Kutti, T; Fang, J K H; Luter, H M; Bannister, R J

2017-05-22

Effects of elevated seawater temperatures on deep-water benthos has been poorly studied, despite reports of increased seawater temperature (up to 4 °C over 24 hrs) coinciding with mass mortality events of the sponge Geodia barretti at Tisler Reef, Norway. While the mechanisms driving these mortality events are unclear, manipulative laboratory experiments were conducted to quantify the effects of elevated temperature (up to 5 °C, above ambient levels) on the ecophysiology (respiration rate, nutrient uptake, cellular integrity and sponge microbiome) of G. barretti. No visible signs of stress (tissue necrosis or discolouration) were evident across experimental treatments; however, significant interactive effects of time and treatment on respiration, nutrient production and cellular stress were detected. Respiration rates and nitrogen effluxes doubled in responses to elevated temperatures (11 °C & 12 °C) compared to control temperatures (7 °C). Cellular stress, as measured through lysosomal destabilisation, was 2-5 times higher at elevated temperatures than for control temperatures. However, the microbiome of G. barretti remained stable throughout the experiment, irrespective of temperature treatment. Mortality was not evident and respiration rates returned to pre-experimental levels during recovery. These results suggest other environmental processes, either alone or in combination with elevated temperature, contributed to the mortality of G. barretti at Tisler reef.

Heavy metals in surface sediments of the Jialu River, China: their relations to environmental factors.

PubMed

Fu, Jie; Zhao, Changpo; Luo, Yupeng; Liu, Chunsheng; Kyzas, George Z; Luo, Yin; Zhao, Dongye; An, Shuqing; Zhu, Hailiang

2014-04-15

This work investigated heavy metal pollution in surface sediments of the Jialu River, China. Sediment samples were collected at 19 sites along the river in connection with field surveys and the total concentrations were determined using atomic fluorescence spectrometer and inductively coupled plasma optical emission spectrometer. Sediment samples with higher metal concentrations were collected from the upper reach of the river, while sediments in the middle and lower reaches had relatively lower metal concentrations. Multivariate techniques including Pearson correlation, hierarchical cluster and principal components analysis were used to evaluate the metal sources. The ecological risk associated with the heavy metals in sediments was rated as moderate based on the assessments using methods of consensus-based Sediment Quality Guidelines, Potential Ecological Risk Index and Geo-accumulation Index. The relations between heavy metals and various environmental factors (i.e., chemical properties of sediments, water quality indices and aquatic organism indices) were also studied. Nitrate nitrogen, total nitrogen, and total polycyclic aromatic hydrocarbons concentrations in sediments showed a co-release behavior with heavy metals. Ammonia nitrogen, total nitrogen, orthophosphate, total phosphate and permanganate index in water were found to be related to metal sedimentation. Heavy metals in sediments posed a potential impact on the benthos community. Copyright © 2014 Elsevier B.V. All rights reserved.

Admiralty Bay Benthos Diversity—A census of a complex polar ecosystem

NASA Astrophysics Data System (ADS)

Siciński, Jacek; Jażdżewski, Krzysztof; Broyer, Claude De; Presler, Piotr; Ligowski, Ryszard; Nonato, Edmundo F.; Corbisier, Thais N.; Petti, Monica A. V.; Brito, Tania A. S.; Lavrado, Helena P.; BŁażewicz-Paszkowycz, Magdalena; Pabis, Krzysztof; Jażdżewska, Anna; Campos, Lucia S.

2011-03-01

A thorough census of Admiralty Bay benthic biodiversity was completed through the synthesis of data, acquired from more than 30 years of observations. Most of the available records arise from successive Polish and Brazilian Antarctic expeditions organized since 1977 and 1982, respectively, but also include new data from joint collecting efforts during the International Polar Year (2007-2009). Geological and hydrological characteristics of Admiralty Bay and a comprehensive species checklist with detailed data on the distribution and nature of the benthic communities are provided. Approximately 1300 species of benthic organisms (excluding bacteria, fungi and parasites) were recorded from the bay's entire depth range (0-500 m). Generalized classifications and the descriptions of soft-bottom and hard-bottom invertebrate communities are presented. A time-series analysis showed seasonal and interannual changes in the shallow benthic communities, likely to be related to ice formation and ice melt within the bay. As one of the best studied regions in the maritime Antarctic Admiralty Bay represents a legacy site, where continued, systematically integrated data sampling can evaluate the effects of climate change on marine life. Both high species richness and high assemblage diversity of the Admiralty Bay shelf benthic community have been documented against the background of habitat heterogeneity.

A new genus and species of Australian Tanypodinae (Diptera: Chironomidae) tolerant to mine waste.

PubMed

Cranston, Peter S

2017-05-09

For over 25 years an undescribed Tanypodinae (Diptera: Chironomidae) has been known to dominate the lotic invertebrate assemblage associated with long-term polluting mine adits in Captains Flat, on the Molonglo River, southern New South Wales, Australia. Although known in all life stages, it has been impossible to allocate the species to any described genus. Renewed interest in the taxonomy of the Tanypodinae, particularly associated with molecular investigations and pollution indicator status warrants formal description. All stages conform to tribe Pentaneurini, but each life stage differs in morphological resemblance. Yarrhpelopia Cranston gen. n. is proposed for the taxon previously referred to under the informal code name of 'genus A'. The genus name derives from south-east Australian aboriginal word yarrh, in recognition of its core distribution and presence in flowing waters. A single species, A. norrisi Cranston sp. n., is described, acknowledging the late Professor Richard Norris, an influential Australian limnologist. Larvae dominate the benthos immediately adjacent to mine adits that continue to leach heavy metals (zinc, cadmium, copper and lead) into downstream sediments. A wider distribution includes cleaner near pristine, eastern Australian rivers between 30° and 42°S, but these records are excluded from the type series pending molecular insights into species limits.

Rapid glass sponge expansion after climate-induced Antarctic ice shelf collapse.

PubMed

Fillinger, Laura; Janussen, Dorte; Lundälv, Tomas; Richter, Claudio

2013-07-22

Over 30% of the Antarctic continental shelf is permanently covered by floating ice shelves, providing aphotic conditions for a depauperate fauna sustained by laterally advected food. In much of the remaining Antarctic shallows (<300 m depth), seasonal sea-ice melting allows a patchy primary production supporting rich megabenthic communities dominated by glass sponges (Porifera, Hexactinellida). The catastrophic collapse of ice shelves due to rapid regional warming along the Antarctic Peninsula in recent decades has exposed over 23,000 km(2) of seafloor to local primary production. The response of the benthos to this unprecedented flux of food is, however, still unknown. In 2007, 12 years after disintegration of the Larsen A ice shelf, a first biological survey interpreted the presence of hexactinellids as remnants of a former under-ice fauna with deep-sea characteristics. Four years later, we revisited the original transect, finding 2- and 3-fold increases in glass sponge biomass and abundance, respectively, after only two favorable growth periods. Our findings, along with other long-term studies, suggest that Antarctic hexactinellids, locked in arrested growth for decades, may undergo boom-and-bust cycles, allowing them to quickly colonize new habitats. The cues triggering growth and reproduction in Antarctic glass sponges remain enigmatic. Copyright © 2013 Elsevier Ltd. All rights reserved.

Recent changes in estuarine benthic and suprabenthic communities resulting from the development of harbour infrastructure.

PubMed

Dauvin, J C; Desroy, N; Janson, A L; Vallet, C; Duhamel, S

2006-01-01

Using a Before/During/After sampling protocol, the effects of the Le Havre harbour extension, which was started at the end of 2001, on the macrobenthic and suprabenthic communities in the eastern Bay of Seine (English Channel) were examined. As the construction phase has not yet been completed, the results presented here reflect only the data collected before and during the operations (September 2000 and 2002 for benthos sampling and March 2001, September 2001, October 2002 and March 2003 for suprabenthos sampling). Although bio-sedimentary changes did occur at the mouth of the Seine river, an analysis of benthic assemblages reveals that the dredging and construction operations do not seem to have influenced assemblage structure or the spatial distribution of organisms. Comparisons of the suprabenthic assemblages at each sampling date indicate that seasonal dynamics was mainly responsible for determining species distribution. We conclude that, 1 year into the harbour management plan, the observed changes in benthic and suprabenthic assemblage abundance do not exceed the range of spatial variability that exists naturally in the Seine estuary. Despite this compensatory actions designed to protect the aquatic habitats and to preserve a sustainable and healthy ecosystem have been added to the infrastructure development plan.

Light and vision in the deep-sea benthos: II. Vision in deep-sea crustaceans.

PubMed

Frank, Tamara M; Johnsen, Sönke; Cronin, Thomas W

2012-10-01

Using new collecting techniques with the Johnson-Sea-Link submersible, eight species of deep-sea benthic crustaceans were collected with intact visual systems. Their spectral sensitivities and temporal resolutions were determined shipboard using electroretinography. Useable spectral sensitivity data were obtained from seven species, and in the dark-adapted eyes, the spectral sensitivity peaks were in the blue region of the visible spectrum, ranging from 470 to 497 nm. Under blue chromatic adaptation, a secondary sensitivity peak in the UV portion of the spectrum appeared for two species of anomuran crabs: Eumunida picta (λ(max)363 nm) and Gastroptychus spinifer (λ(max)383 nm). Wavelength-specific differences in response waveforms under blue chromatic adaptation in these two species suggest that two populations of photoreceptor cells are present. Temporal resolution was determined in all eight species using the maximum critical flicker frequency (CFF(max)). The CFF(max) for the isopod Booralana tricarinata of 4 Hz proved to be the lowest ever measured using this technique, and suggests that this species is not able to track even slow-moving prey. Both the putative dual visual pigment system in the crabs and the extremely slow eye of the isopod may be adaptations for seeing bioluminescence in the benthic environment.

Moorea producens gen. nov., sp. nov. and Moorea bouillonii comb. nov., tropical marine cyanobacteria rich in bioactive secondary metabolites.

PubMed

Engene, Niclas; Rottacker, Erin C; Kaštovský, Jan; Byrum, Tara; Choi, Hyukjae; Ellisman, Mark H; Komárek, Jiří; Gerwick, William H

2012-05-01

The filamentous cyanobacterial genus Moorea gen. nov., described here under the provisions of the International Code of Botanical Nomenclature, is a cosmopolitan pan-tropical group abundant in the marine benthos. Members of the genus Moorea are photosynthetic (containing phycocyanin, phycoerythrin, allophycocyanin and chlorophyll a), but non-diazotrophic (lack heterocysts and nitrogenase reductase genes). The cells (discoid and 25-80 µm wide) are arranged in long filaments (<10 cm in length) and often form extensive mats or blooms in shallow water. The cells are surrounded by thick polysaccharide sheaths covered by a rich diversity of heterotrophic micro-organisms. A distinctive character of this genus is its extraordinarily rich production of bioactive secondary metabolites. This is matched by genomes rich in polyketide synthase and non-ribosomal peptide synthetase biosynthetic genes which are dedicated to secondary metabolism. The encoded natural products are sometimes responsible for harmful algae blooms and, due to morphological resemblance to the genus Lyngbya, this group has often been incorrectly cited in the literature. We here describe two species of the genus Moorea: Moorea producens sp. nov. (type species of the genus) with 3L(T) as the nomenclature type, and Moorea bouillonii comb. nov. with PNG5-198(R) as the nomenclature type.

Estimates of global cyanobacterial biomass and its distribution

USGS Publications Warehouse

Garcia-Pichel, Ferran; Belnap, Jayne; Neuer, Susanne; Schanz, Ferdinand

2003-01-01

We estimated global cyanobacterial biomass in the main reservoirs of cyanobacteria on Earth: marine and freshwater plankton, arid land soil crusts, and endoliths. Estimates were based on typical population density values as measured during our research, or as obtained from literature surveys, which were then coupled with data on global geographical area coverage. Among the marine plankton, the global biomass of Prochlorococcus reaches 120 × 1012 grams of carbon (g C), and that of Synechoccus some 43 × 1012 g C. This makes Prochlorococcus and Synechococcus, in that order, the most abundant cyanobacteria on Earth. Tropical marine blooms of Trichodesmium account for an additional 10 × 1012 g C worldwide. In terrestrial environments, the mass of cyanobacteria in arid land soil crusts is estimated to reach 54 × 1012 g C and that of arid land endolithic communities an additional 14 × 1012 g C. The global biomass of planktic cyanobacteria in lakes is estimated to be around 3 × 1012 g C. Our conservative estimates, which did not include some potentially significant biomass reservoirs such as polar and subarctic areas, topsoils in subhumid climates, and shallow marine and freshwater benthos, indicate that the total global cyanobacterial biomass is in the order of 3 × 1014 g C, surpassing a thousand million metric tons (1015 g) of wet biomass.

Bioeconomic analysis of the environmental impact of a marine fish farm.

PubMed

Rabassó, Miguel; Hernández, Juan M

2015-08-01

The evaluation of the environmental impact of aquaculture installations is nowadays a common social demand in many countries. The usual scientific approach to this question has been to assess the outcome from an ecological perspective, focussing on the effects produced on benthos or the water column and interactions with marine flora and fauna. In this paper, a bioeconomic model is developed to extend this traditional approach, to determine both the amount of total settled matter, its dispersion on the ocean floor and impacts on the marine ecosystem, while also taking into account other social considerations such as discounted net profits and investment returns. The model was applied to the case of off-shore gilthead seabream production in a coastal area of the Canary Isles archipelago, where the tidal current is predominant. Cage emissions and the degree of degradation of seagrass meadows on the seabed were taken as ecological impact indicators, while the net present value (NPV) for a specific time period was used as an economic indicator. By analysing the simulation results obtained by the bioeconomic model, we were able to determine the combination of production volume and harvest quantity which yields the greatest economic efficiency for different levels of degraded area. Copyright © 2015 Elsevier Ltd. All rights reserved.

Possible effects of global environmental changes on Antarctic benthos: a synthesis across five major taxa

PubMed Central

Ingels, Jeroen; Vanreusel, Ann; Brandt, Angelika; Catarino, Ana I; David, Bruno; De Ridder, Chantal; Dubois, Philippe; Gooday, Andrew J; Martin, Patrick; Pasotti, Francesca; Robert, Henri

2012-01-01

Because of the unique conditions that exist around the Antarctic continent, Southern Ocean (SO) ecosystems are very susceptible to the growing impact of global climate change and other anthropogenic influences. Consequently, there is an urgent need to understand how SO marine life will cope with expected future changes in the environment. Studies of Antarctic organisms have shown that individual species and higher taxa display different degrees of sensitivity to environmental shifts, making it difficult to predict overall community or ecosystem responses. This emphasizes the need for an improved understanding of the Antarctic benthic ecosystem response to global climate change using a multitaxon approach with consideration of different levels of biological organization. Here, we provide a synthesis of the ability of five important Antarctic benthic taxa (Foraminifera, Nematoda, Amphipoda, Isopoda, and Echinoidea) to cope with changes in the environment (temperature, pH, ice cover, ice scouring, food quantity, and quality) that are linked to climatic changes. Responses from individual to the taxon-specific community level to these drivers will vary with taxon but will include local species extinctions, invasions of warmer-water species, shifts in diversity, dominance, and trophic group composition, all with likely consequences for ecosystem functioning. Limitations in our current knowledge and understanding of climate change effects on the different levels are discussed. PMID:22423336

Long-term studies (1871-2000) on acidification and recovery of lakes in the Bohemian Forest (central Europe).

PubMed

Vrba, Jaroslav; Kopácek, Jirí; Fott, Jan; Kohout, Leos; Nedbalová, Linda; Prazáková, Miroslava; Soldán, Tomás; Schaumburg, Jochen

2003-07-01

This paper evaluates long-term changes in the atmospheric depositions of S and N compounds, lake water quality, and biodiversity at eight glacial lakes in the Bohemian Forest over the past 130 years. This time interval covers (i) the 'background' pre-acidification status of the lakes, (ii) a period of changes in the communities that can be partly explained by introduction of fish, (iii) a period of strong lake acidification with its adverse impacts on the communities, (iv) the lake reversal from acidity, which includes the recent status of the lakes. The lake water chemistry has followed-with a characteristic hysteresis-both the sharp increase and decline in the deposition trends of strong anions. Remarkable changes in biota have mirrored the changing water quality. Fish became extinct and most species of zooplankton (Crustacea) and benthos (Ephemeroptera and Plecoptera) retreated due to the lake water acidification. Independent of ongoing chemical reversal, microorganisms remain dominant in the recent plankton biomass as well as in controlling the pelagic food webs. The first signs of the forthcoming biological recovery have already been evidenced in some lakes, such as the population of Ceriodaphnia quadrangula (Cladocera) returning into the pelagial of one lake or the increase in both phytoplankton biomass and rotifer numbers in another lake.

Controls on methane concentrations and fluxes in streams draining human-dominated landscapes

USGS Publications Warehouse

Crawford, John T.; Stanley, Emily H.

2016-01-01

Streams and rivers are active processors of carbon, leading to significant emissions of CO2 and possibly CH4 to the atmosphere. Patterns and controls of CH4 in fluvial ecosystems remain relatively poorly understood. Furthermore, little is known regarding how major human impacts to fluvial ecosystems may be transforming their role as CH4 producers and emitters. Here, we examine the consequences of two distinct ecosystem changes as a result of human land use: increased nutrient loading (primarily as nitrate), and increased sediment loading and deposition of fine particles in the benthic zone. We did not find support for the hypothesis that enhanced nitrate loading down-regulates methane production via thermodynamic or toxic effects. We did find strong evidence that increased sedimentation and enhanced organic matter content of the benthos lead to greater methane production (diffusive + ebullitive flux) relative to pristine fluvial systems in northern Wisconsin (upper Midwest, USA). Overall, streams in a human-dominated landscape of southern Wisconsin were major regional sources of CH4 to the atmosphere, equivalent to ~20% of dairy cattle emissions, or ~50% of a landfill’s annual emissions. We suggest that restoration of the benthic environment (reduced fine deposits) could lead to reduced CH4 emissions, while decreasing nutrient loading is likely to have limited impacts to this ecosystem process.

Community variability and ecological functioning: 40 years of change in the North Sea benthos.

PubMed

Clare, D S; Robinson, L A; Frid, C L J

2015-06-01

Using established associations between species traits (life history, morphological and behavioural characteristics) and key ecological functions, we applied biological traits analysis (BTA) to investigate the consequences of 40 years of change in two North Sea benthic communities. Ecological functioning (trait composition) was found to be statistically indistinguishable across periods that differed significantly in taxonomic composition. A temporary alteration to functioning was, however, inferred at both sampling stations; coinciding with the North Sea regime shift of the 1980s. Trait composition recovered after 1 year at the station located inside the grounds of a trawl fishery, whereas the station located outside the main area of fishing activity underwent a six-year period of significantly altered, and temporally unstable, trait composition. A further alteration to functioning was inferred at the fished station, when the population of a newly established species rapidly increased in numbers. The results suggest that density compensation by characteristically similar (redundant) taxa acts to buffer changes to ecological functioning over time, but that functional stability is subject to aperiodic disruption due to substitutions of dissimilar taxa or uncompensated population fluctuations. The rate at which ecological functioning stabilises and recovers appears to be dependent on environmental context; e.g. disturbance regime. Copyright © 2015 Elsevier Ltd. All rights reserved.

Predicting stress in benthic communities of southeastern U.S. estuaries in relation to chemical contamination of sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hyland, J.L.; Dolah, R.F. van; Snoots, T.R.

1999-11-01

Matching data on sediment contaminants (metals, PAHs, PCBs) and macroinfaunal community structure from 231 subtidal stations in southeastern US estuaries were used to develop a framework for evaluating risks of benthic impacts from multiple-contaminant exposure. Sediment contamination was expressed as the mean ratio of individual contaminant concentrations relative to corresponding sediment quality guidelines, that is, to effects range-median (ERM) values, probable effects level (PEL) values, or an aggregate of the two. The probability of a degraded benthos was relatively low in samples with mean ERM quotients {le}0.020, PEL quotients {le}0.035, or combined ERM/PEL quotients {le}0.024. Only 5% of stations withinmore » these ranges had degraded benthic assemblages, while 95% had healthy assemblages. A higher probability of benthic impacts was observed in samples with mean ERM quotients >0.058, PEL quotients >0.096, or ERM/PEL quotients >0.077. Seventy-three to 78% of stations with values in these upper ranges had degraded benthic assemblages, while 22 to 27% had healthy assemblages. Only four stations (three with degraded, one with healthy assemblages) had mean ERM or PEL quotients >1.0, which is the beginning of the range associated with a high probability of mortality in short-term laboratory toxicity tests using amphipods.« less

Benthic macroinvertebrate and fish communities in Lake Huron are linked to submerged groundwater vents

USGS Publications Warehouse

Garrison, Sanders T.; Biddanda, B.A.; Stricker, C.A.; Nold, S.C.

2011-01-01

Groundwater can be an important source of nutrients and energy to aquatic ecosystems, but quantifying the inputs and biogeochemical importance remains challenging. A series of submerged groundwater vents in northern Lake Huron were examined to determine the linkage between groundwater nutrients and aquatic food webs. We collected samples of key food-web components from groundwater vent and reference habitats and analyzed them for 13C, 15N, and 34S isotopes. Dissolved inorganic carbon (DIC) in the groundwater was depleted in 13C, while aqueous sulfate was enriched in 34S (mean differences between groundwater and reference sites were -3.9% and +12.0%, respectively). Benthic primary producers, macroinvertebrates, and benthivorous fish had significantly lower ??13C values in groundwater environments, and benthivorous fish were somewhat depleted (-2.5%) in ??34S at groundwater sites compared to reference sites. However, ??15N values were not different between groundwater and reference sites, and pelagic components of the ecosystems (plankton and planktivorous and piscivorous fish) were similar in both ??13C and ??15N. These data suggest benthic metazoan communities surrounding groundwater vents are partially linked to groundwater-derived benthic primary production, while planktivorous and piscivorous communities not directly associated with the benthos do not rely on groundwater nutrients. ?? Inter-Research 2011.

Coral reef grazer-benthos dynamics complicated by invasive algae in a small marine reserve

PubMed Central

Stamoulis, Kostantinos A.; Friedlander, Alan M.; Meyer, Carl G.; Fernandez-Silva, Iria; Toonen, Robert J.

2017-01-01

Blooms of alien invasive marine algae have become common, greatly altering the health and stability of nearshore marine ecosystems. Concurrently, herbivorous fishes have been severely overfished in many locations worldwide, contributing to increases in macroalgal cover. We used a multi-pronged, interdisciplinary approach to test if higher biomass of herbivorous fishes inside a no-take marine reserve makes this area more resistant to invasive algal overgrowth. Over a two year time period, we (1) compared fish biomass and algal cover between two fished and one unfished patch reef in Hawai’i, (2) used acoustic telemetry to determine fidelity of herbivorous fishes to the unfished reef, and (3) used metabarcoding and next-generation sequencing to determine diet composition of herbivorous fishes. Herbivore fish biomass was significantly higher in the marine reserve compared to adjacent fished reefs, whereas invasive algal cover differed by species. Herbivorous fish movements were largely confined to the unfished patch reef where they were captured. Diet analysis indicated that the consumption of invasive algae varied among fish species, with a high prevalence of comparatively rare native algal species. Together these findings demonstrate that the contribution of herbivores to coral reef resilience, via resistance to invasive algae invasion, is complex and species-specific. PMID:28276458

Relationships between ecosystem metabolism, benthic macroinvertebrate densities, and environmental variables in a sub-arctic Alaskan river

USGS Publications Warehouse

Benson, Emily R.; Wipfli, Mark S.; Clapcott, Joanne E.; Hughes, Nicholas F.

2013-01-01

Relationships between environmental variables, ecosystem metabolism, and benthos are not well understood in sub-arctic ecosystems. The goal of this study was to investigate environmental drivers of river ecosystem metabolism and macroinvertebrate density in a sub-arctic river. We estimated primary production and respiration rates, sampled benthic macroinvertebrates, and monitored light intensity, discharge rate, and nutrient concentrations in the Chena River, interior Alaska, over two summers. We employed Random Forests models to identify predictor variables for metabolism rates and benthic macroinvertebrate density and biomass, and calculated Spearman correlations between in-stream nutrient levels and metabolism rates. Models indicated that discharge and length of time between high water events were the most important factors measured for predicting metabolism rates. Discharge was the most important variable for predicting benthic macroinvertebrate density and biomass. Primary production rate peaked at intermediate discharge, respiration rate was lowest at the greatest time since last high water event, and benthic macroinvertebrate density was lowest at high discharge rates. The ratio of dissolved inorganic nitrogen to soluble reactive phosphorus ranged from 27:1 to 172:1. We found that discharge plays a key role in regulating stream ecosystem metabolism, but that low phosphorous levels also likely limit primary production in this sub-arctic stream.

A study of possible ``reef effects'' caused by a long-term time-lapse camera in the deep North Pacific

NASA Astrophysics Data System (ADS)

Vardaro, M. F.; Parmley, D.; Smith, K. L.

2007-08-01

The aggregation response of fish populations following the addition of artificial structures to seafloor habitats has been well documented in shallow-water reefs and at deeper structures such as oil extraction platforms. A long-term time-lapse camera was deployed for 27 four-month deployment periods at 4100 m in the eastern North Pacific to study abyssal megafauna activity and surface-benthos connections. The unique time-series data set provided by this research presented an opportunity to examine how deep-sea benthopelagic fish and epibenthic megafauna populations were affected by an isolated artificial structure and whether animal surveys at this site were biased by aggregation behavior. Counts were taken of benthopelagic grenadiers, Coryphaenoides spp., observed per week as well as numbers of the epibenthic echinoid Echinocrepis rostrata. No significant correlation ( rs=-0.39; p=0.11) was found between the duration of deployment (in weeks) and the average number of Coryphaenoides observed at the site. There was also no evidence of associative behavior around the time-lapse camera by E. rostrata ( rs=-0.32; p=0.19). The results of our study suggest that abyssal fish and epibenthic megafauna do not aggregate around artificial structures and that long-term time-lapse camera studies should not be impacted by aggregation response behaviors.

Effects of natural and human-induced hypoxia on coastal benthos

NASA Astrophysics Data System (ADS)

Levin, L. A.; Ekau, W.; Gooday, A. J.; Jorissen, F.; Middelburg, J. J.; Naqvi, W.; Neira, C.; Rabalais, N. N.; Zhang, J.

2009-04-01

Coastal hypoxia (<1.42 ml L-1; 62.5 μM; 2 mg L-1, approx. 30% oxygen saturation) occurs seasonally in many estuaries, fjords, and along open coasts subject to upwelling or excessive riverine nutrient input, and permanently in some isolated seas and marine basins. Underlying causes of hypoxia include enhanced nutrient input from natural causes (upwelling) or anthropogenic origin (eutrophication) and reduction of mixing by limited circulation or enhanced stratification; combined these lead to higher surface water production, microbial respiration and eventual oxygen depletion. Advective inputs of low-oxygen waters may initiate or expand hypoxic conditions. Responses of estuarine, enclosed sea, and open shelf benthos to hypoxia depend on the duration, predictability, and intensity of oxygen depletion and on whether H2S is formed. Under suboxic conditions, large mats of filamentous sulfide oxidizing bacteria cover the seabed and consume sulfide, thereby providing a detoxified microhabitat for eukaryotic benthic communities. Calcareous foraminiferans and nematodes are particularly tolerant of low oxygen concentrations and may attain high densities and dominance, often in association with microbial mats. When oxygen is sufficient to support metazoans, small, soft-bodied invertebrates (typically annelids), often with short generation times and elaborate branchial structures, predominate. Large taxa are more sensitive than small taxa to hypoxia. Crustaceans and echinoderms are typically more sensitive to hypoxia, with lower oxygen thresholds, than annelids, sipunculans, molluscs and cnidarians. Mobile fish and shellfish will migrate away from low-oxygen areas. Within a species, early life stages may be more subject to oxygen stress than older life stages. Hypoxia alters both the structure and function of benthic communities, but effects may differ with regional hypoxia history. Human-caused hypoxia is generally linked to eutrophication, and occurs adjacent to watersheds with large populations or agricultural activities. Many occurrences are seasonal, within estuaries, fjords or enclosed seas of the North Atlantic and the NW Pacific Oceans. Benthic faunal responses, elicited at oxygen levels below 2 ml L-1, typically involve avoidance or mortality of large species and elevated abundances of enrichment opportunists, sometimes prior to population crashes. Areas of low oxygen persist seasonally or continuously beneath upwelling regions, associated with the upper parts of oxygen minimum zones (SE Pacific, W Africa, N Indian Ocean). These have a distribution largely distinct from eutrophic areas and support a resident fauna that is adapted to survive and reproduce at oxygen concentrations <0.5 ml L-1. Under both natural and eutrophication-caused hypoxia there is loss of diversity, through attrition of intolerant species and elevated dominance, as well as reductions in body size. These shifts in species composition and diversity yield altered trophic structure, energy flow pathways, and corresponding ecosystem services such as production, organic matter cycling and organic C burial. Increasingly the influences of nature and humans interact to generate or exacerbate hypoxia. A warmer ocean is more stratified, holds less oxygen, and may experience greater advection of oxygen-poor source waters, making new regions subject to hypoxia. Future understanding of benthic responses to hypoxia must be established in the context of global climate change and other human influences such as overfishing, pollution, disease, habitat loss, and species invasions.

Trophic dynamics of deep-sea megabenthos are mediated by surface productivity.

PubMed

Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

2013-01-01

Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ(13)C and δ(15)N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation.

Entanglement of Australian sea lions and New Zealand fur seals in lost fishing gear and other marine debris before and after Government and industry attempts to reduce the problem.

PubMed

Page, Brad; McKenzie, Jane; McIntosh, Rebecca; Baylis, Alastair; Morrissey, Adam; Calvert, Norna; Haase, Tami; Berris, Mel; Dowie, Dave; Shaughnessy, Peter D; Goldsworthy, Simon D

2004-07-01

In recent years, Australian governments and fishing industry associations have developed guiding principles aimed at reducing the impact of fishing on non-target species and the benthos and increasing community awareness of their efforts. To determine whether they reduced seal entanglement in lost fishing gear and other marine debris, we analysed Australian sea lion and New Zealand fur seal entanglement data collected from Kangaroo Island, South Australia. Contrary to our expectations, we found that entanglement rates did not decrease in recent years. The Australian sea lion entanglement rate (1.3% in 2002) and the New Zealand fur seal entanglement rate (0.9% in 2002) are the third and fourth highest reported for any seal species. Australian sea lions were most frequently entangled in monofilament gillnet that most likely originated from the shark fishery, which operates in the region where sea lions forage--south and east of Kangaroo Island. In contrast, New Zealand fur seals were most commonly entangled in loops of packing tape and trawl net fragments suspected to be from regional rock lobster and trawl fisheries. Based on recent entanglement studies, we estimate that 1478 seals die from entanglement each year in Australia. We discuss remedies such as education programs and government incentives that may reduce entanglements.

Biodiversity of nematode assemblages from the region of the Clarion-Clipperton Fracture Zone, an area of commercial mining interest.

PubMed

Lambshead, P John D; Brown, Caroline J; Ferrero, Timothy J; Hawkins, Lawrence E; Smith, Craig R; Mitchell, Nicola J

2003-01-09

The possibility for commercial mining of deep-sea manganese nodules is currently under exploration in the abyssal Clarion-Clipperton Fracture Zone. Nematodes have potential for biomonitoring of the impact of commercial activity but the natural biodiversity is unknown. We investigate the feasibility of nematodes as biomonitoring organisms and give information about their natural biodiversity. The taxonomic composition (at family to genus level) of the nematode fauna in the abyssal Pacific is similar, but not identical to, the North Atlantic. Given the immature state of marine nematode taxonomy, it is not possible to comment on the commonality or otherwise of species between oceans. The between basin differences do not appear to be directly linked to current ecological factors. The abyssal Pacific region (including the Fracture Zone) could be divided into two biodiversity subregions that conform to variations in the linked factors of flux to the benthos and of sedimentary characteristics. Richer biodiversity is associated with areas of known phytodetritus input and higher organic-carbon flux. Despite high reported sample diversity, estimated regional diversity is less than 400 species. The estimated regional diversity of the CCFZ is a tractable figure for biomonitoring of commercial activities in this region using marine nematodes, despite the immature taxonomy (i.e. most marine species have not been described) of the group. However, nematode ecology is in dire need of further study.

Giant larvaceans: biologically equivalent flapping flexible foils exhibit bending modes that enhance fluid transport

NASA Astrophysics Data System (ADS)

Katija, Kakani; Sherman, Alana; Robison, Bruce

2016-11-01

The midwater region of the ocean (below the euphotic zone and above the benthos) is one of the largest ecosystems on our planet, yet remains one of the least explored. Little-known marine organisms that inhabit midwater have developed life strategies that contribute to their evolutionary success, and may inspire engineering solutions for societally relevant challenges. A group of midwater organisms, known as giant larvaceans (genus Bathochordaeus), beat their tails to drive food and particle-laden water through complex, mucus filtering structures to feed. Giant larvaceans, whose motion and kinematics resemble flapping flexible foils, range in size from 1 to 10 cm in length, and can be found between the surface and 400 m. Using remotely-operated vehicles and DeepPIV, an instrument that enables in situ particle image velocimetry (PIV) measurements, the filtration rates and kinematics of giant larvaceans were investigated. These measurements yielded filtration rates for giant larvaceans as high as 80 L/hr, which exceeds expected filtration rates by a factor of 2 when compared with other larvacean groups. Comparing tail kinematics between Bathochordeaus and smaller larvaceans reveals differences in tail bending modes, where a hinge is present throughout the tail beat in giant larvaceans. Using laboratory PIV measurements with swimming animals and soft-bodied mechanical mimics, we reveal how these differences in tail kinematics can lead to enhanced fluid transport. This work has been supported by the Packard Foundation.

Experimental evidence of chemical defence mechanisms in Antarctic bryozoans.

PubMed

Figuerola, Blanca; Angulo-Preckler, Carlos; Núñez-Pons, Laura; Moles, Juan; Sala-Comorera, Laura; García-Aljaro, Cristina; Blanch, Anicet R; Avila, Conxita

2017-08-01

Bryozoans are among the most abundant and diverse members of the Antarctic benthos, however the role of bioactive metabolites in ecological interactions has been scarcely studied. To extend our knowledge about the chemical ecology of Antarctic bryozoans, crude ether extracts (EE) and butanol extracts (BE) obtained from two Antarctic common species (Cornucopina pectogemma and Nematoflustra flagellata), were tested for antibacterial and repellent activities. The extracts were screened for quorum quenching and antibacterial activities against four Antarctic bacterial strains (Bacillus aquimaris, Micrococcus sp., Oceanobacillus sp. and Paracoccus sp.). The Antarctic amphipod Cheirimedon femoratus and the sea star Odontaster validus were selected as sympatric predators to perform anti-predatory and substrate preference assays. No quorum quenching activity was detected in any of the extracts, while all EE exhibited growth inhibition towards at least one bacterium strain. Although the species were not repellent against the sea star, they caused repellence to the amphipods in both extracts, suggesting that defence activities against predation derive from both lipophilic and hydrophilic metabolites. In the substrate preference assays, one EE and one BE deriving from different specimens of the species C. pectogemma were active. This study reveals intraspecific variability of chemical defences and supports the fact that chemically mediated interactions are common in Antarctic bryozoans as means of protection against fouling and predation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Syllidae (Annelida: Phyllodocida) from the deep Mediterranean Sea, with the description of three new species.

PubMed

Langeneck, Joachim; Musco, Luigi; Busoni, Giulio; Conese, Ilaria; Aliani, Stefano; Castelli, Alberto

2018-01-03

Despite almost two centuries of research, the diversity of Mediterranean deep-sea environments remain still largely unexplored. This is particularly true for the polychaete family Syllidae. We report herein 14 species; among them, we describe Erinaceusyllis barbarae n. sp., Exogone sophiae n. sp. and Prosphaerosyllis danovaroi n. sp. and report Parexogone wolfi San Martín, 1991, Exogone lopezi San Martín, Ceberio Aguirrezabalaga, 1996 and Anguillosyllis Day, 1963 for the first time from the Western Mediterranean, the latter based on a single individual likely belonging to an undescribed species. Moreover, we re-establish Syllis profunda Cognetti, 1955 based on type and new material. Present data, along with a critical analysis of available literature, show that Syllidae are highly diverse in deep Mediterranean environments, even though they are rarely reported, probably due to the scarce number of studies devoted to the size-fraction of benthos including deep-sea syllids. Most deep-sea Syllidae have wide distributions, which do not include shallow-waters. 100 m depth apparently represents the boundary between the assemblages dominated by generalist shallow water syllids like Exogone naidina Ørsted, 1843 and Syllis parapari San Martín López, 2000, and those deep-water assemblages characterised by strictly deep-water species like Parexogone campoyi San Martín, Ceberio Aguirrezabalaga, 1996, Parexogone wolfi San Martín, 1991 and Syllis sp. 1 (= Langerhansia caeca Katzmann, 1973).

Horizontal transmission of Symbiodinium cells between adult and juvenile corals is aided by benthic sediment

NASA Astrophysics Data System (ADS)

Nitschke, Matthew R.; Davy, Simon K.; Ward, Selina

2016-03-01

Of all reef-building coral species, 80-85 % initially draw their intracellular symbionts (dinoflagellates of the genus Symbiodinium) from the environment. Although Symbiodinium cells are crucial for the growth of corals and the formation of coral reefs, little is known about how corals first encounter free-living Symbiodinium cells. We report how the supply of free-living Symbiodinium cells to the benthos by adult corals can increase the rate of horizontal symbiont acquisition for conspecific recruits. Three species of newly settled aposymbiotic (i.e., symbiont-free) corals were maintained in an open aquarium system containing: sterilized sediment and adult coral fragments combined; adult coral fragments alone; sterilized sediment alone; or seawater at Heron Island, Great Barrier Reef, Australia. In all instances, the combination of an adult coral and sediment resulted in the highest symbiont acquisition rates by juvenile corals (up to five-fold greater than seawater alone). Juvenile corals exposed to individual treatments of adult coral or sediment produced an intermediate acquisition response (<52 % of recruits), and symbiont acquisition from unfiltered seawater was comparatively low (<20 % of recruits). Additionally, benthic free-living Symbiodinium cells reached their highest densities in the adult coral + sediment treatment (up to 1.2 × 104 cells mL-1). Our results suggest that corals seed microhabitats with free-living Symbiodinium cells suitable for many coral species during the process of coral recruitment.

Warming shifts top-down and bottom-up control of pond food web structure and function

PubMed Central

Shurin, Jonathan B.; Clasen, Jessica L.; Greig, Hamish S.; Kratina, Pavel; Thompson, Patrick L.

2012-01-01

The effects of global and local environmental changes are transmitted through networks of interacting organisms to shape the structure of communities and the dynamics of ecosystems. We tested the impact of elevated temperature on the top-down and bottom-up forces structuring experimental freshwater pond food webs in western Canada over 16 months. Experimental warming was crossed with treatments manipulating the presence of planktivorous fish and eutrophication through enhanced nutrient supply. We found that higher temperatures produced top-heavy food webs with lower biomass of benthic and pelagic producers, equivalent biomass of zooplankton, zoobenthos and pelagic bacteria, and more pelagic viruses. Eutrophication increased the biomass of all organisms studied, while fish had cascading positive effects on periphyton, phytoplankton and bacteria, and reduced biomass of invertebrates. Surprisingly, virus biomass was reduced in the presence of fish, suggesting the possibility for complex mechanisms of top-down control of the lytic cycle. Warming reduced the effects of eutrophication on periphyton, and magnified the already strong effects of fish on phytoplankton and bacteria. Warming, fish and nutrients all increased whole-system rates of net production despite their distinct impacts on the distribution of biomass between producers and consumers, plankton and benthos, and microbes and macrobes. Our results indicate that warming exerts a host of indirect effects on aquatic food webs mediated through shifts in the magnitudes of top-down and bottom-up forcing. PMID:23007089

Plankton Production, Fish Catch, and the Potential for Sharp Regional Catch Trends Under Climate Change

NASA Astrophysics Data System (ADS)

Stock, C. A.; John, J. G.; Lam, V.; Rykaczewski, R. R.; Cheung, W. W. L.; Dunne, J. P.; Asch, R. G.; Sarmiento, J. L.

2016-02-01

Fish catch has been related to diverse plankton metrics with often ambiguous mechanistic linkages to fish and varying degrees of spatial and temporal robustness. Proposed fish catch indicators also exhibit different patterns of variability and projected change, hindering fisheries assessments and the formulation of resilient marine resource management strategies. We combine 1) a new catch reconstruction featuring improved estimates of illegal and under-reported catch, 2) a novel high-resolution global Earth System Model (GFDL-ESM2.6) featuring 10 km ocean resolution and regionally robust patterns of carbon flow through the planktonic food web, and 3) simple fish trophodynamic considerations, and revisit the relationship between catch and planktonic food web fluxes in a more mechanistic context. Realized 20-year peak catches across globally distributed coastal regions could be well explained by the estimated planktonic production available to fish (via mesozooplankton and the flux of carbon to the benthos) after accounting for the catch trophic level (r = 0.64, r = 0.74 after removing lightly fished Australian systems). Similar skill, however, could result from models invoking high trophic efficiencies within the fish food web and a modest fraction of energy available to fish taken as catch, or low trophic efficiencies and a high fraction. Projections using either parameter combination suggest that projected regional changes in fish yields may be considerably larger than those implied from primary production.

Foundations of Wind Turbines as Stepping Stones for Non-Indigenous Species in the Southern North Sea

NASA Astrophysics Data System (ADS)

De Mesel, I.; Degraer, S.; Kerckhof, F.; Schön, I.; Martens, K.

2016-02-01

Since 2008, offshore wind farms have been constructed in the shallow waters (<50m) of the Southern North Sea. At present, hundreds of turbines are operational and many more are planned. A new habitat for benthos has been created, with vertical hard structures in the offshore environment, extending from the sandy seabed to the sea surface. Monitoring in Belgian waters focussed on the succession of the fouling community in the sub- and intertidal zone, with special attention to non-indigenous species (NIS). A Metridium senile-Jassa herdmani dominated community developed in the subtidal, and only few NIS were present (3 out of a total of 90 species observed). Their presence was however most striking in the intertidal zone, where we identified 17 obligate intertidal species with about half of them being non-indigenous. This study confirmed the hypothesis that the introduced hard substrata within offshore wind farms play an important role in the establishment and the expansion of the population of both indigenous and non-indigenous species. Foundations of wind turbines strengthen the strategic position of NIS in the southern North Sea. An ongoing study on the population genetics of a fouling species (Patella vulgata) will, in combination with dispersal modelling, elucidate the dispersal pattern and connectivity with neighbouring areas, and the role of the foundations as stepping stones.

Diversity of Southern Ocean deep-sea benthos between cosmopolitism and cryptic speciation: new species from the ANDEEP expeditions.

PubMed

Schüller, Myriam; Brandt, Angelika; Ebbe, Brigitte

2013-01-01

The richness of life in parts of the earth that to us appear inhospitable and remote never fails to fascinate scientists and non-scientists alike. The largest ecosystem of the planet, the abyssal plains of the world ocean, makes up about 90 percent of the seafloor and thus nearly 78 percent of the Earth’s surface, yet only a minor fraction of this huge environment has been investigated. Authors have questioned repeatedly "how many species would live on earth and in the ocean" (Mora et al. 2011; May 2011), and recent estimations predict ~ 8.7 million (+/- 1.3 million SE) eukaryotic species globally, with 2.2 million of these being marine (Mora et al. 2011). To date, 91 % of all marine species still await description. Other authors concluded that marine biodiversity is grossly underestimated (Bouchet 2006) because so far, only one-third of all species descriptions concerns marine biota (Reaka-Kudla 1997; Groombridge & Jenkins 2000, Grassle 2001, Boltovskoy et al. 2005). We know that marine live thrives even in hadal trenches (Jamieson et al. 2009), that biogeographic ranges in the deep sea are dynamic (McClain & Mincks Hardy 2010) and that the origin of the modern deep-sea fauna is ancient (Thuy et al. 2012). For example, the origin of Isopoda dates back to Permo-Triassic times (232– 314 mya; Lins et al. 2012).

Assessing contamination in Great Lakes sediments using benthic invertebrate communities and the sediment quality triad approach

USGS Publications Warehouse

Canfield, Timothy J.; Dwyer, F. James; Fairchild, James F.; Haverland, Pamela S.; Ingersoll, Christopher G.; Kemble, Nile E.; Mount, David R.; La Point, Thomas W.; Burton, G. Allen; Swift, M. C.

1996-01-01

Sediments in many Great Lakes harbors and tributary rivers are contaminated. As part of the USEPA's Assessment and Remediation of Contaminated Sediment (ARCS) program, a number of studies were conducted to determine the nature and extent of sediment contamination in Great Lakes Areas of Concern (AOC). This paper describes the composition of benthic invertebrate communities in contaminated sediments and is one in a series of papers describing studies conducted to evaluate sediment toxicity from three AOC's (Buffalo River, NY; Indiana Harbor, IN; Saginaw River, MI), as part of the ARCS Program. Oligochaeta (worms) and Chironomidae (midge) comprised over 90% of the benthic invertebrate numbers in samples collected from depositional areas. Worms and midge consisted of taxa identified as primarily contaminant tolerant organisms. Structural deformities of mouthparts in midge larvae were pronounced in many of the samples. Good concurrence was evident between measures of laboratory toxicity, sediment contaminant concentration, and benthic invertebrate community composition in extremely contaminated samples. However, in moderately contaminated samples, less concordance was observed between the benthos community composition and either laboratory toxicity test results or sediment contaminant concentration. Laboratory sediment toxicity tests may better identify chemical contamination in sediments than many commonly used measures of benthic invertebrate community composition. Benthic measures may also reflect other factors such as habitat alteration. Evaluation of non-contaminant factors are needed to better interpret the response of benthic invertebrates to sediment contamination.

Evidence of macroalgal colonization on newly ice-free areas following glacial retreat in Potter Cove (South Shetland Islands), Antarctica.

PubMed

Quartino, María Liliana; Deregibus, Dolores; Campana, Gabriela Laura; Latorre, Gustavo Edgar Juan; Momo, Fernando Roberto

2013-01-01

Climate warming has been related to glacial retreat along the Western Antarctic Peninsula. Over the last years, a visible melting of Fourcade Glacier (Potter Cove, South Shetland Islands) has exposed newly ice-free hard bottom areas available for benthic colonization. However, ice melting produces a reduction of light penetration due to an increase of sediment input and higher ice impact. Seventeen years ago, the coastal sites close to the glacier cliffs were devoid of macroalgae. Are the newly ice-free areas suitable for macroalgal colonization? To tackle this question, underwater video transects were performed at six newly ice-free areas with different degree of glacial influence. Macroalgae were found in all sites, even in close proximity to the retreating glacier. We can show that: 1. The complexity of the macroalgal community is positively correlated to the elapsed time from the ice retreat, 2. Algae development depends on the optical conditions and the sediment input in the water column; some species are limited by light availability, 3. Macroalgal colonization is negatively affected by the ice disturbance, 4. The colonization is determined by the size and type of substrate and by the slope of the bottom. As macroalgae are probably one of the main energy sources for the benthos, an expansion of the macroalgal distribution can be expected to affect the matter and energy fluxes in Potter Cove ecosystem.

Quantifying the Benthic Source of Nutrients to the Water Column of Upper Klamath Lake, Oregon

USGS Publications Warehouse

Kuwabara, James S.; Lynch, Dennis D.; Topping, Brent R.; Murphy, Fred; Carter, James L.; Simon, Nancy S.; Parcheso, Francis; Wood, Tamara M.; Lindenberg, Mary K.; Wiese, Katryn; Avanzino, Ronald J.

2007-01-01

Executive Summary Five sampling trips were coordinated in April, May and August 2006, and May and July 2007 to sample the water column and benthos of Upper Klamath Lake, OR (Fig. 1; Table 1), before, during and after the annual cyanophyte bloom of Aphanizomenon flos-aquae (AFA). A pore-water profiler was designed and fabricated to obtain the first high-resolution (centimeter-scale) estimates of the vertical concentration gradients for diffusive-flux determinations. Estimates based on molecular diffusion may underestimate benthic flux because solute transport across the sediment-water interface can be enhanced by processes including bioturbation, bioirrigation and ground-water advection. Water-column and benthic samples were also collected to help interpret spatial and temporal trends in diffusive-flux estimates. Data from these samples complement geochemical analyses of bottom-sediments taken from Upper Klamath Lake (UKL) in 2005. This ongoing study provides information necessary for developing process-interdependent solute-transport models for the watershed (that is, models integrating physical, geochemical and biological processes), and supports efforts to evaluate remediation or load-allocation strategies. To augment studies funded by the U.S. Bureau of Reclamation (USBR), the Department of Interior supported an additional full deployment of pore-water profilers in July 2007, during the summer AFA bloom. Results from this recent field trip are not fully completed. Data not presented herein will be included in a subsequent publication, scheduled for March 2009.

Effects of benthos, temperature, and dose on the fate of hexabromocyclododecane in experimental coastal ecosystems.

PubMed

Bradshaw, Clare; Strid, Anna; von Stedingk, Hans; Gustafsson, Kerstin

2015-06-01

The authors studied the fate of the brominated flame retardant hexabromocyclododecane (HBCDD) added in a particulate suspension to experimental ecosystems assembled from brackish (Baltic Sea) coastal bays. Two experiments examined how benthic macrofauna (over 21 d) and increased temperature (14 d) affected HBCDD concentrations and fractionation of α, β, and γ diastereomers in the water, sediment, and biota. A third experiment run over 3 seasons (231 d), studied the effect of HBCDD dose on the same endpoints. In all treatments of the 3 experiments, HBCDD partitioned mainly to the sediment, and this proportion increased with time. Presence of macrofauna tended to increase the HBCDD concentration in the sediment and decreased its concentration in the water. Increased temperature (+ 5°C) decreased the amount of HBCDD in sediment and water but not in the filter- and deposit-feeding infaunal bivalves (Macoma balthica). The partitioning between water, sediment, and biota was not concentration dependent. In all treatments, sediment became enriched in γ-HBCDD, M. balthica in α-HBCDD, and water in α- and β-HBCDD. Bioaccumulation of HBCDD in M. balthica was high in all experiments (log biota-sediment accumulation factor [BSAF] > 1.25), the α diastereomer contributing the most (log BSAF 2.1-5.2). There is a risk of trophic transfer of HBCDD from benthic to pelagic food webs, as well as secondary poisoning of marine consumers. © 2015 SETAC.

Organic matter degradation drives benthic cyanobacterial mat abundance on Caribbean coral reefs.

PubMed

Brocke, Hannah J; Polerecky, Lubos; de Beer, Dirk; Weber, Miriam; Claudet, Joachim; Nugues, Maggy M

2015-01-01

Benthic cyanobacterial mats (BCMs) are impacting coral reefs worldwide. However, the factors and mechanisms driving their proliferation are unclear. We conducted a multi-year survey around the Caribbean island of Curaçao, which revealed highest BCM abundance on sheltered reefs close to urbanised areas. Reefs with high BCM abundance were also characterised by high benthic cover of macroalgae and low cover of corals. Nutrient concentrations in the water-column were consistently low, but markedly increased just above substrata (both sandy and hard) covered with BCMs. This was true for sites with both high and low BCM coverage, suggesting that BCM growth is stimulated by a localised, substrate-linked release of nutrients from the microbial degradation of organic matter. This hypothesis was supported by a higher organic content in sediments on reefs with high BCM coverage, and by an in situ experiment which showed that BCMs grew within days on sediments enriched with organic matter (Spirulina). We propose that nutrient runoff from urbanised areas stimulates phototrophic blooms and enhances organic matter concentrations on the reef. This organic matter is transported by currents and settles on the seabed at sites with low hydrodynamics. Subsequently, nutrients released from the organic matter degradation fuel the growth of BCMs. Improved management of nutrients generated on land should lower organic loading of sediments and other benthos (e.g. turf and macroalgae) to reduce BCM proliferation on coral reefs.

Impact of eutrophication on shallow marine benthic foraminifers over the last 150 years in Osaka Bay, Japan

USGS Publications Warehouse

Tsujimoto, Akira; Nomura, Ritsuo; Yasuhara, Moriaki; Yamazaki, Hideo; Yoshikawa, Shusaku

2006-01-01

High-resolution foraminiferal analysis was conducted on a short sediment core from the inner part of Osaka Bay, Japan. Changes in foraminiferal assemblages were associated with eutrophication, bottom water hypoxia, and changes in red tide-causing algae. Before the 1920s, the calcareous species Ammonia beccarii, and the agglutinated species Eggerella advena and Trochammina hadai were rare, but calcareous foraminifers in general were abundant. Between the 1920s and 1940s, calcareous foraminifers decreased abruptly in abundance, while A. beccarii, E. advena and T. hadai increased in abundance. This faunal change corresponded in time to an increase in nutrients flowing in through the Yodo River, and bottom water hypoxia related to eutrophication. In the 1960s and 1970s, A. beccarii, E. advena and T. hadai further increased in abundance to become dominant, and many calcareous foraminifers nearly disappeared, corresponding to increasing bottom water hypoxia related to the rapid increase in discharged nutrients during the high economic growth period from 1953 to 1971. After the 1990s, A. beccarii decreased rapidly in abundance and E. advena and Uvigerinella glabra increased in abundance. The main components of red tide-causing algae changed from dinoflagellates to diatoms in the 1980s through 1990s, thus there was a change in the food supply to the benthos, which may have caused the increase in abundance of E. advena and U. glabra.

Increased benthic grazing: An alternative explanation for low phytoplankton biomass in northern San Francisco Bay during the 1976-1977 drought

USGS Publications Warehouse

Nichols, F.H.

1985-01-01

Among the consequences of extremely low river flow into northern San Francisco Bay during a two-year drought were (1) a gradual increase in salinity, (2) an unusual decline in chlorophyll a concentration, and (3) the upstream migration of estuarine benthic invertebrates to the normally brackish area of the bay. Total abundance in the benthos at a shallow monitoring site increased from a normal 2000 to greater than 20 000 individuals m-2 during the summer of 1977, presumably in response to the increased salinity. Estimated filtration rates derived from equations in the literature for one of the species, the suspended-feeding bivalve Mya arenaria ranged from 1 to 4 m3 m-2 day-1 during 1977 depending on abundance and mean size on sampling dates. Because water depth at this site is less than 2 m, Mya could have filtered all of the particles (including diatoms) from the water column on the order of once per day. Several other immigrant species undoubtedly contributed to the removal of particles from the near-bottom water as well. Increased benthic grazing, therefore, could have accounted for the anomalously low phytoplankton biomass observed during the drought. These results suggest that during periods of prolonged low river flow and increased salinity benthic food webs could become more important than planktonic food webs in the upper part of the estuary. ?? 1985.

Trophic Dynamics of Deep-Sea Megabenthos Are Mediated by Surface Productivity

PubMed Central

Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

2013-01-01

Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ13C and δ15N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation. PMID:23691098

Effects of a chronic lower range of triclosan exposure to a stream mesocosm community

USGS Publications Warehouse

Nietch, C.T.; Quinlan, E.L.; Lazorchak, J.; Impellitteri, C.; Raikow, D.; Walters, David M.

2013-01-01

Triclosan (5-chloro-2-(2,4-dichlorophenoxy)phenol) is an antimicrobial found in consumer soaps and toothpaste. It is in treated wastewater effluents at low part per billion concentrations, representing a potentially chronic exposure condition for biota inhabiting receiving streams. A naturally colonized benthos was created using flow-through indoor mesocosms. Then the benthic communities were dosed to achieve different in-stream triclosan concentrations (Control, 0.1, 0.5, 1.0, 5.0, and 10 µg/L) for 56 days. Water quality parameters and endpoints from bacteria to macroinvertebrates plus interacting abiotic components were measured. Effects of triclosan on specific microbial endpoints were observed at all doses, including an effect on litter decomposition dynamics at doses 1.0 µg/L and higher. Resistance of periphytic bacteria to triclosan significantly increased in doses 0.5 µg/L and above. By the end of dosing, the antimicrobial appeared to stimulate the stream periphyton at the three lowest doses while the two highest doses exhibited decreased stocks of periphyton, including significantly lower bacteria cell densities, and cyanobacteria abundance compared to the control. Beside an effect on benthic ostracods, the changes that occurred in the periphyton did not translate to significant change in the colonizing nematodes, the macroinvertebrate community as a whole, or other measurements of stream function. The results shed light on the role a low, chronic exposure to triclosan may play in effluent dominated streams.

Compound-specific isotopes of fatty acids as indicators of trophic interactions in the East China Sea ecosystem

NASA Astrophysics Data System (ADS)

Wu, Ying; Wang, Na; Zhang, Jing; Wan, Ruijing; Dai, Fangqun; Jin, Xianshi

2016-09-01

The composition and compound-specific isotopes of fatty acids were studied within food webs in the East China Sea. Lipid-normalized stable carbon isotopes of total organic carbon had a good correlation with trophic level. Variations in fatty acid compositions among diff erent species were observed but were unclear. Diff erent dietary structures could be traced from molecular isotopes of selected fatty acids in the Shiba shrimp ( Matapenaeus joyneri), the coastal mud shrimp ( Solenocera crassicornis) and the northern Maoxia shrimp ( Acetes chinensis). Both M. joyneri and S. crassicornis are mainly benthos feeders, while A. chinensis is a pelagic species, although they have a similar fatty acid composition. There was a good correlation for isotopes of arachidonic acid (C20:4n6; ARA) and docosahexaenoic acid (C22:6n3; DHA) among pelagic species from higher trophic levels. The isotopic compositions of DHA in benthic species were more negative than those of pelagic species at the same trophic level. The fact that the diet of benthic species contains more degraded items, the carbon isotopes of which are derived from a large biochemical fraction, may be the reason for this variation. A comparative study of benthic and pelagic species demonstrated the diff erent carbon sources in potential food items and the presence of a more complex system at the water-sediment interface.

Exploration of an urban lake management model to simulate chlorine interference based on the ecological relationships among aquatic species.

PubMed

Yan, Zhiqiang; Wang, Yafei; Wu, Di; Xia, Beicheng

2018-05-29

In eutrophic lakes, algae are known to be sensitive to chlorine, but the impact of chlorine on the wider ecosystem has not been investigated. To quantitatively investigate the effects of chlorine on the urban lake ecosystem and analyze the changes in the aquatic ecosystem structure, a dynamic response model of aquatic species to chlorine was constructed based on the biomass density dynamics of aquatic species of submerged macrophytes, phytoplankton, zooplankton, periphyton, and benthos. The parameters were calibrated using data from the literature and two simulative experiments. The model was then validated using field data from an urban lake with a surface area of approximately 8000 m 2 located in the downtown area of Guangzhou, South China. The correlation coefficient (R), root mean square error-observations standard deviation ratio (RSR) and index of agreement (IOA) were used to evaluate the accuracy and reliability of the model and the results were consistent with the observations (0.446 R < 0.985, RSR < 0.7, IOA > 0.6). Comparisons between the simulated and observed trends confirmed the feasibility of using this model to investigate the dynamics of aquatic species under chlorine interference. The model can help managers apply a modest amount of chlorine to control eutrophication and provides scientific support for the management of urban lakes.

EPA's National Coastal Condition Assessment: Pilot research ...

EPA Pesticide Factsheets

The EPA Office of Water’s 5-year cycles of national surveys of wetlands, lakes, rivers, and coastal areas help satisfy the assessment and antidegradation provisions of the Clean Water Act. Measuring extant conditions precedes measuring change in conditions. Surveys are challenged to adequately sample extreme conditions occurring in small areas. Extremely bad conditions are targets for remediation. Extremely good conditions are targets for protection. In 2010, the National Coastal Condition Assessment (NCCA) found the majority of the coastal Great Lakes (by area) was in good condition for water (60%) and sediment (51%) quality but not benthos (20%) and fish tissue contaminants (<1%). Low sampling success for biological sampling was an issue. As part of the 2014 Lake Erie CSMI field year, EPA’s Great Lakes National Program Office, working with the Office of Research and Development, began pilot research to integrate connecting channels into Great Lakes surveys. Assessments of the Huron-Erie corridor (HEC; 2014, 2015) and St Marys River (SMR; 2015, 2016) which have previously gone unassessed by NCCA, are being developed. Water, sediment, and benthic quality data from the 2014 HEC survey (n=60) were compared to 2010 NCCA data from adjacent lakes. Water quality rated “poor” (as % area) in HEC was intermediate compared to Lake Huron and Erie regardless of which lake-specific thresholds were used. However, the amount of area classified as “good” was highl

Stable isotopes reveal the effect of trawl fisheries on the diet of commercially exploited species.

PubMed

Hinz, Hilmar; Moranta, Joan; Balestrini, Stephen; Sciberras, Marija; Pantin, Julia R; Monnington, James; Zalewski, Alex; Kaiser, Michel J; Sköld, Mattias; Jonsson, Patrik; Bastardie, Francois; Hiddink, Jan Geert

2017-07-24

Bottom trawling can change food availability for benthivorous demersal species by (i) changing benthic prey composition through physical seabed impacts and (ii) by removing overall benthic consumer biomass increasing the net availability of benthic prey for remaining individuals. Thus trawling may both negatively and positively influence the quantity and quality of food available. Using δ 13 C and δ 15 N we investigated potential diet changes of three commercially exploited species across trawling gradients in the Kattegat (plaice, dab and Norway lobster (Nephrops)) and the Irish Sea (Nephrops). In the Kattegat, trawling affected primarily the biomass of benthic consumers, lowering competition. Nephrops showed significant positive relationships for δ 13 C and a domed relationship for δ 15 N with trawling. In the Irish Sea, intense trawling had a negative effect on benthic prey. δ 13 C and δ 15 N thus showed the inverse relationships to those observed in the Kattegat. Plaice from the Kattegat, showed a significant relationship with trawling intensity for δ 13 C, but not for δ 15 N. No relationship was found for dab. Changes of δ 13 C and δ 15 N correlated with changes in condition of species. The results show that the removal of demersal competitors and benthos by trawling can change the diets of commercial species, ultimately affecting their body condition.

Assessing Marine Species Exposure to Ocean Acidification

NASA Astrophysics Data System (ADS)

Jewett, E.; Busch, S.; McElhany, P.; Gledhill, D. K.; Milke, L. M.; Wieczorek, D.

2016-02-01

Assessing the vulnerability of society to ocean acidification (OA) demands an understanding of both the sensitivity of economically important species together with an organism's exposure to potentially harmful carbonate chemistry conditions. However, research has revealed that sensitivity to OA is frequently life-stage dependent and the environmental conditions experienced by a marine organism often vary with life-stage. Enhancing the development of a National Ocean Acidification Observing Network (NOA-ON) and establishing appropriate treatment conditions for experimental studies requires careful consideration of where the vulnerable life-stages of an organism reside in space (e.g., estuary versus oceanic), depth (e.g., surface mixed layer versus benthos), and time (e.g., diel vertical migration, seasonality of the chemical environment within the context of an organism life cycle). Few studies have explicitly attempted to document carbonate chemistry dynamics specific to a given organism's life-cycle. Here we estimate carbonate dynamics in terms of aragonite saturation state range and variability within the U.S. Northeast and West Coast through the application of NOAA's NOA-ON assets mapped out with respect to the life stages of economically important species within those regions. Two economically important species will be considered for which the life-cycles are well known along with the sensitivities to OA for early life-stages: Atlantic Surf Clam in the northeast and Dungeness Crab of the northwest coast of the U.S. Other species may also be considered.

Protein, carbohydrate, lipid concentrations and HSP 70-HSP 90 (stress protein) expression over an annual cycle: useful tools to detect feeding constraints in a benthic suspension feeder

NASA Astrophysics Data System (ADS)

Rossi, Sergio; Snyder, Mark J.; Gili, Josep-Marìa

2006-03-01

In the present paper we suggest an effect of seasonal variations in food availability on two ecophysiological parameters in a warm temperate benthic suspension feeder: the tissue concentrations of proteins, carbohydrates and lipids on the one hand, and the expression of stress proteins (HSP 70 and 90, inducible and/or constitutive) on the other hand. The concentrations of biomacromolecules have already been used to describe bentho-pelagic and reproductive processes, but this is the first time that stress protein expression is suggested to be directly related with food constraints in marine organisms. Paramuricea clavata (Cnidaria: Gorgonacea) express HSP 70 and 90 (constitutive and/or inducible) throughout the seasonal cycle, and HSP 70 levels are twice as high as the levels of HSP 90. In summer and autumn, when seston availability to suspension feeders was low, P. clavata showed low levels of carbohydrates and lipids, but high levels of HSPs expression. The levels of HSP 70 and 90 expression fit with negative exponential functions of carbohydrate and lipid concentrations. We suggest a direct effect of food availability on the studied ecophysiological parameters while the effect of temperature may be rather indirect. HSP expression as well as the tissue concentrations of carbohydrate and lipids may be used as biomarkers of environmental changes and seston availability to benthic suspension feeders.

Marine Ostracod Provinciality in the Late Ordovician of Palaeocontinental Laurentia and Its Environmental and Geographical Expression

PubMed Central

Mohibullah, Mohibullah; Williams, Mark; Vandenbroucke, Thijs R. A.; Sabbe, Koen; Zalasiewicz, Jan A.

2012-01-01

Background We examine the environmental, climatic and geographical controls on tropical ostracod distribution in the marine Ordovician of North America. Methodology/Principal Findings Analysis of the inter-regional distribution patterns of Ordovician Laurentian ostracods, focussing particularly on the diverse Late Ordovician Sandbian (ca 461 to 456 Ma) faunas, demonstrates strong endemicity at the species-level. Local endemism is very pronounced, ranging from 25% (e.g. Foxe basin) to 75% (e.g. Michigan basin) in each basin, a pattern that is also reflected in other benthic faunas such as brachiopods. Multivariate (ordination) analyses of the ostracod faunas allow demarcation of a Midcontinent Province and a southern Marginal Province in Laurentia. While these are most clearly differentiated at the stratigraphical level of the bicornis graptolite biozone, analyses of the entire dataset suggest that these provinces remain distinct throughout the Sandbian interval. Differences in species composition between the provinces appear to have been controlled by changes in physical parameters (e.g. temperature and salinity) related to water depth and latitude and a possible regional geographic barrier, and these differences persist into the Katian and possibly the Hirnantian. Local environmental parameters, perhaps operating at the microhabitat scale, may have been significant in driving local speciation events from ancestor species in each region. Conclusions/Significance Our work establishes a refined methodology for assessing marine benthic arthropod micro-benthos provinciality for the Early Palaeozoic. PMID:22900000

Total, chemical, and biological oxygen consumption of the sediments in the Ziya River watershed, China.

PubMed

Rong, Nan; Shan, Baoqing

2016-07-01

Sediment oxygen demand (SOD) is a critical dissolved oxygen (DO) sink in many rivers. Understanding the relative contributions of the biological and chemical components of SOD would improve our knowledge of the potential environmental harm SOD could cause and allow appropriate management systems to be developed. A various inhibitors addition technique was conducted to measure the total, chemical, and biological SOD of sediment samples from 13 sites in the Ziya River watershed, a severely polluted and anoxic river system in the north of China. The results showed that the major component of SOD was chemical SOD due to iron predominate. The ferrous SOD accounted for 21.6-78.9 % of the total SOD and 33.26-96.79 % of the chemical SOD. Biological SOD represented 41.13 % of the overall SOD averagely. Sulfide SOD accounted for 1.78-45.71 % of the total SOD and it was the secondary predominate of the chemical SOD. Manganous SOD accounted for 1.2-16.6 % of the total SOD and it was insignificant at many sites. Only four kinds of benthos were collected in the Ziya River watershed, resulting from the low DO concentration in the sediment surface due to SOD. This study would be helpful for understanding and preventing the potential sediment oxygen depletion during river restoration.

Re-evaluating the health of coral reef communities: baselines and evidence for human impacts across the central Pacific.

PubMed

Smith, Jennifer E; Brainard, Rusty; Carter, Amanda; Grillo, Saray; Edwards, Clinton; Harris, Jill; Lewis, Levi; Obura, David; Rohwer, Forest; Sala, Enric; Vroom, Peter S; Sandin, Stuart

2016-01-13

Numerous studies have documented declines in the abundance of reef-building corals over the last several decades and in some but not all cases, phase shifts to dominance by macroalgae have occurred. These assessments, however, often ignore the remainder of the benthos and thus provide limited information on the present-day structure and function of coral reef communities. Here, using an unprecedentedly large dataset collected within the last 10 years across 56 islands spanning five archipelagos in the central Pacific, we examine how benthic reef communities differ in the presence and absence of human populations. Using islands as replicates, we examine whether benthic community structure is associated with human habitation within and among archipelagos and across latitude. While there was no evidence for coral to macroalgal phase shifts across our dataset we did find that the majority of reefs on inhabited islands were dominated by fleshy non-reef-building organisms (turf algae, fleshy macroalgae and non-calcifying invertebrates). By contrast, benthic communities from uninhabited islands were more variable but in general supported more calcifiers and active reef builders (stony corals and crustose coralline algae). Our results suggest that cumulative human impacts across the central Pacific may be causing a reduction in the abundance of reef builders resulting in island scale phase shifts to dominance by fleshy organisms. © 2016 The Author(s).

Deep-Sea Macrobenthos Community Structure Proximal to the 2010 Macondo Well Blowout (2010-2011)

NASA Astrophysics Data System (ADS)

Briggs, K. B.; Brunner, C. A.; Yeager, K. M.

2017-12-01

Macrobenthos, polycyclic aromatic hydrocarbons (PAH) and sedimentary organic carbon (SOC) were sampled by multicorer in the vicinity of the Deepwater Horizon well head in October 2010 and 2011 to assess the effects of the April 2010 spill. Four stations were sampled east of the well head, four stations were sampled west of the well head, and "control" stations were sampled 58 and 65 km to the southwest. The macrobenthos community, as expected for continental slope/bathyal (water depth 1160-1760 m) benthos, was highly diverse. Polychaetes dominated at all stations, with either crustaceans or mollusks comprising the next most abundant taxon. The stations within five km of the well head showed slightly lower diversity than the more distal stations six months after the blowout. Compared to the "control" station, proportions of suspension feeders were generally depressed at stations with high PAH concentrations. Anomalously high values for abundance and diversity (and PAH) were found at one station 20 km west of the well head. The median body size of macrobenthos was negatively correlated with total PAH concentration, with 74% of the variation in median size explained by variation in PAH, when the anomalous station was excluded. Macrobenthos abundance did not appear to be influenced by SOC. Abundance and diversity of the macrobenthos was generally higher 18 months after the blowout, with measured PAH concentrations diminished to below background level.

Spatial and temporal variations in silver contamination and toxicity in San Francisco Bay

USGS Publications Warehouse

Flegal, A.R.; Brown, C.L.; Squire, S.; Ross, J.R.M.; Scelfo, G.M.; Hibdon, S.

2007-01-01

Although San Francisco Bay has a "Golden Gate", it may be argued that it is the "Silver Estuary". For at one time the Bay was reported to have the highest levels of silver in its sediments and biota, along with the only accurately measured values of silver in solution, of any estuarine system. Since then others have argued that silver contamination is higher elsewhere (e.g., New York Bight, Florida Bay, Galveston Bay) in a peculiar form of pollution machismo, while silver contamination has measurably declined in sediments, biota, and surface waters of the Bay over the past two to three decades. Documentation of those systemic temporal declines has been possible because of long-term, ongoing monitoring programs, using rigorous trace metal clean sampling and analytical techniques, of the United States Geological Survey and San Francisco Bay Regional Monitoring Program that are summarized in this report. However, recent toxicity studies with macro-invertebrates in the Bay have indicated that silver may still be adversely affecting the health of the estuarine system, and other studies have indicated that silver concentrations in the Bay may be increasing due to new industrial inputs and/or the diagenetic remobilization of silver from historically contaminated sediments being re-exposed to overlying surface waters and benthos. Consequently, the Bay may not be ready to relinquish its title as the "Silver Estuary". ?? 2007 Elsevier Inc. All rights reserved.

Results of an adaptive environmental assessment modeling workshop concerning potential impacts of drilling muds and cuttings on the marine environment

USGS Publications Warehouse

Auble, Gregor T.; Andrews, Austin K.; Ellison, Richard A.; Hamilton, David B.; Johnson, Richard A.; Roelle, James E.; Marmorek, David R.

1983-01-01

Drilling fluids or "muds" are essential components of modern drilling operations. They provide integrity for the well bore, a medium for removal of formation cuttings, and lubrication and cooling of the drill bit and pipe. The modeling workshop described in this report was conducted September 14-18, 1981 in Gulf Breeze, Florida to consider potential impacts of discharged drilling muds and cuttings on the marine environment. The broad goals of the workshop were synthesis of information on fate and effects, identification of general relationships between drilling fluids and the marine environment, and identification of site-specific variables likely to determine impacts of drilling muds and cuttings in various marine sites. The workshop was structured around construction of a model simulating fate and effects of discharges from a single rig into open water areas of the Gulf of Mexico, and discussion of factors that might produce different fate and effects in enclosed areas such as bays and estuaries. The simulation model was composed of four connected submodels. A Discharge/Fate submodel dealt with the discharge characteristics of the rig and the subsequent fate of discharged material. Three effects submodels then calculated biological responses at distances away from the rig for the water column, soft bottom benthos (assuming the rig was located over a soft bottom environment), and hard bottom benthos (assuming the rig was located over a hard bottom environment). The model focused on direct linkages between the discharge and various organisms rather than on how the marine ecosystem itself is interconnected. Behavior of the simulation model indicated relatively localized effects of drilling muds and cuttings discharged from a single platform into open water areas. Water column fate and effects were dominated by rapid dilution. Effects from deposition of spent mud and cuttings were spatially limited with relatively rapid recovery, especially in soft bottom benthic communities which were conceptualized as being adapted to frequent storms. This behavior was generated by the set of assumptions about linkages and functional relationships used to construct the model. Areas of uncertainty included methods for extrapolating 96-hr LC50 so results to exposures of varying lengths and concentrations; recovery rates of benthic communities; responses to various depths and rates of burial; fate and effects of the plume in relationship to stratification layers; and long-term and sub-lethal effects of slightly elevated concentrations of discharged materials. Evaluation of the assumptions of the Soft Bottom Submodel suggest that the assumptions used may have been relatively liberal estimates of resiliency of these communities. Discussion of "closed" water bodies such as bays and estuaries indicated several reasons to expect different and more complex fate and effects behavior in these areas. These factors included different species and communities (such as aquatic macrophytes and oyster beds), more complex circulation and stratification patterns, and potentially more active resuspension processes. Much of the possible difference in behavior in these areas centers around the extent to which they are “closed” or in the relative residence times of water and sediments in these areas as they determine the long-term dispersion of discharged material. Despite the complexity and variability of these areas, a large body of knowledge (such as that concerning fate and physical effects of dredge spoil) that could be effectively employed in analysis of potential fate and physical effects in enclosed areas was identified.

Effects of experimental otter trawling on benthic assemblages on Western Bank, northwest Atlantic Ocean

NASA Astrophysics Data System (ADS)

Kenchington, Ellen L. R.; Gilkinson, Kent D.; MacIsaac, Kevin G.; Bourbonnais-Boyce, Cynthia; Kenchington, Trevor J.; Smith, Stephen J.; Gordon, Donald C., Jr.

2006-10-01

The effects of otter trawling on a hard-bottom ecosystem on Western Bank on Canada's Scotian Shelf were examined experimentally from 1997 to 1999 with an asymmetrical BACI design. The site was located within an area that had been closed to fishing since 1987 to protect juvenile haddock. An experimental line was trawled 12-14 times on three separate occasions over a 20 month period. The benthic macrofauna and megafauna were sampled before and after trawling on both impact and control lines with both a grab and a photographic system. The 100 grab samples collected contained 341 taxa, primarily polychaetes, amphipods and molluscs, the majority (60%) of which were epifaunal. Biomass was dominated by the horse-mussel Modiolus modiolus, a long-lived bivalve, while the tube-building amphipod Ericthonius fasciatus was the most abundant species. Through the study period the benthos on the control lines showed little qualitative or quantitative change in individual taxa or community metrics. However, the abundance of 24 individual taxa (polychaetes, amphipods, echinoderms and molluscs) changed significantly, with the majority of these increasing. This resulted in a significantly different relative abundance of taxa between years as detected through ANOSIM. A significant change in relative biomass amongst the taxa was also observed. Trawling had few detectable immediate effects on the abundance or biomass of individual taxa and none on community composition. A few taxa, primarily a mixture of polychaetes and amphipods, decreased significantly after trawling and data from fish stomachs collected during the experiment (Kenchington, E.L., Gordon Jr., D.C., Bourbonnais-Boyce, C., MacIsaac, K.G., Gilkinson, K.D., McKeown, D.L., Vass, W.P., 2005. Effects of experimental otter trawling on the feeding of demersal fish on Western Bank, Nova Scotia. Amer. Fish. Soc. Symp. 41, 391-409) showed that some of these were scavenged by demersal fish. Fifteen taxa showed significant decreases after trawling when the cumulative effects of trawling were considered. As in the analyses of individual years the species affected were primarily high turn-over species such as polychaetes and amphipods. Dominance curves prepared for both control and impact samples before trawling in 1997 and after trawling in 1999 showed a marked decrease in the biomass values of the highest ranking taxa, particularly of the first species, M. modiolus, only on the impact line at the conclusion of the experiment. The proportion of epifaunal biomass also declined significantly from 90% to 77% on the impact line by the conclusion of the experiment. These changes are in part due to trawl-induced damage and subsequent predation by demersal fish of the top ranking species. Analysis of the photographic images showed that the three top-ranking species in terms of biomass, M. modiolus, the tube-building polychaete Thelepus cincinnatus, and the brachiopod Terebratulina septentrionalis, were visibly damaged more than other species by the trawl gear. Two of these species, M. modiolus and T. cincinnatus, were preyed upon by scavenging demersal fish. The use of multiple sampling devices at the experimental site (grab, photographic system reported here and trawl and fish stomachs reported by Kenchington, E.L., Gordon Jr., D.C., Bourbonnais-Boyce, C., MacIsaac, K.G., Gilkinson, K.D., McKeown, D.L., Vass, W.P., 2005. Effects of experimental otter trawling on the feeding of demersal fish on Western Bank, Nova Scotia. Amer. Fish. Soc. Symp. 41, 391-409) enabled us to link trawl-induced changes to the benthos to predation by demersal fish.

Species- and habitat-specific bioaccumulation of total mercury and methylmercury in the food web of a deep oligotrophic lake.

PubMed

Arcagni, Marina; Juncos, Romina; Rizzo, Andrea; Pavlin, Majda; Fajon, Vesna; Arribére, María A; Horvat, Milena; Ribeiro Guevara, Sergio

2018-01-15

Niche segregation between introduced and native fish in Lake Nahuel Huapi, a deep oligotrophic lake in Northwest Patagonia (Argentina), occurs through the consumption of different prey. Therefore, in this work we analyzed total mercury [THg] and methylmercury [MeHg] concentrations in top predator fish and in their main prey to test whether their feeding habits influence [Hg]. Results indicate that [THg] and [MeHg] varied by foraging habitat and they increased with greater percentage of benthic diet and decreased with pelagic diet in Lake Nahuel Huapi. This is consistent with the fact that the native creole perch, a mostly benthivorous feeder, which shares the highest trophic level of the food web with introduced salmonids, had higher [THg] and [MeHg] than the more pelagic feeder rainbow trout and bentho-pelagic feeder brown trout. This differential THg and MeHg bioaccumulation observed in native and introduced fish provides evidence to the hypothesis that there are two main Hg transfer pathways from the base of the food web to top predators: a pelagic pathway where Hg is transferred from water, through plankton (with Hg in inorganic species mostly), forage fish to salmonids, and a benthic pathway, as Hg is transferred from the sediments (where Hg methylation occurs mostly), through crayfish (with higher [MeHg] than plankton), to native fish, leading to one fold higher [Hg]. Copyright © 2017 Elsevier B.V. All rights reserved.

Microphallus ochotensis sp. nov. (Digenea, Microphallidae) and relative merits of two-host microphallid life cycles.

PubMed

Galaktionov, Kirill V; Blasco-Costa, Isabel

2018-04-01

A new digenean species, Microphallus ochotensis sp. nov., was described from the intestine of Pacific eiders (Somateria mollissima v-nigrum) from the north of the Sea of Okhotsk. It differs from other microphallids in the structure of the metraterm, which consists of two distinct parts: a sac with spicule-like structures and a short muscular duct opening into the genital atrium. Mi. ochotensis forms a monophyletic clade together with other congeneric species in phylograms derived from the 28S and ITS2 rRNA gene. Its dixenous life cycle was elucidated with the use of the same molecular markers. Encysted metacercariae infective for birds develop inside sporocysts in the first intermediate host, an intertidal mollusc Falsicingula kurilensis. The morphology of metacercariae and adults was described with an emphasis on the structure of terminal genitalia. Considering that Falsicingula occurs at the Pacific coast of North America and that the Pacific eider is capable of trans-continental flights, the distribution of Mi. ochotensis might span the Pacific coast of Alaska and Canada. The range of its final hosts may presumably include other benthos-feeding marine ducks as well as shorebirds. We suggest that a broad occurrence of two-host life cycles in microphallids is associated with parasitism in birds migrating along sea coasts. The chances that migrating birds would stop at a site where both first and second intermediate hosts occur are relatively low. The presence of a single molluscan host in the life cycle increases the probability of transmission.

Infection Paradox: High Abundance but Low Impact of Freshwater Benthic Viruses

PubMed Central

Filippini, Manuela; Buesing, Nanna; Bettarel, Yvan; Sime-Ngando, Télesphore; Gessner, Mark O.

2006-01-01

The discovery of an abundant and diverse virus community in oceans and lakes has profoundly reshaped ideas about global carbon and nutrient fluxes, food web dynamics, and maintenance of microbial biodiversity. These roles are exerted through massive viral impact on the population dynamics of heterotrophic bacterioplankton and primary producers. We took advantage of a shallow wetland system with contrasting microhabitats in close proximity to demonstrate that in marked contrast to pelagic systems, viral infection, determined directly by transmission electron microscopy, and consequently mortality of prokaryotes were surprisingly low in benthic habitats in all seasons. This was true even though free viruses were abundant throughout the year and bacterial infection and mortality rates were high in surrounding water. The habitats in which we found this pattern include sediment, decomposing plant litter, and biofilms on aquatic vegetation. Overall, we detected viruses in only 4 of a total of ∼15,000 bacterial cells inspected in these three habitats; for comparison, nearly 300 of ∼5,000 cells suspended in the water column were infected. The strikingly low incidence of impact of phages in the benthos may have important implications, since a major portion of microbial biodiversity and global carbon and nutrient turnover are associated with surfaces. Therefore, if failure to infect benthic bacteria is a widespread phenomenon, then the global role of viruses in controlling microbial diversity, food web dynamics, and biogeochemical cycles would be greatly diminished compared to predictions based on data from planktonic environments. PMID:16820485

Stabilization of benthic algal biomass in a temperate stream draining agroecosystems.

PubMed

Ford, William I; Fox, James F

2017-01-01

Results of the present study quantified carbon sequestration due to algal stabilization in low order streams, which has not been considered previously in carbon stream ecosystem studies. The authors used empirical mode decomposition of an 8-year carbon elemental and isotope dataset to quantify carbon accrual and fingerprint carbon derived from algal stabilization. The authors then applied a calibrated, process-based stream carbon model (ISOFLOC) that elicits further evidence of algal stabilization. Data and modeling results suggested that processes of shielding and burial during an extreme hydrologic event enhance algal stabilization. Given that previous studies assumed stream algae are turned over or sloughed downstream, the authors performed scenario simulations of the calibrated model in order to assess how changing environmental conditions might impact algae stabilization within the stream. Results from modeling scenarios showed an increase in algal stabilization as mean annual water temperature increases ranging from 0 to 0.04 tC km -2  °C -1 for the study watershed. The dependence of algal stabilization on temperature highlighted the importance of accounting for benthic fate of carbon in streams under projected warming scenarios. This finding contradicts the evolving paradigm that net efflux of CO 2 from streams increases with increasing temperatures. Results also quantified sloughed algae that is transported and potentially stabilized downstream and showed that benthos-derived sloughed algae was on the same order of magnitude, and at times greater, than phytoplankton within downstream water bodies. Copyright © 2016 Elsevier Ltd. All rights reserved.

Intensive removal of signal crayfish (Pacifastacus leniusculus) from rivers increases numbers and taxon richness of macroinvertebrate species.

PubMed

Moorhouse, Tom P; Poole, Alison E; Evans, Laura C; Bradley, David C; Macdonald, David W

2014-02-01

Invasive species are a major cause of species extinction in freshwater ecosystems, and crayfish species are particularly pervasive. The invasive American signal crayfish Pacifastacus leniusculus has impacts over a range of trophic levels, but particularly on benthic aquatic macroinvertebrates. Our study examined the effect on the macroinvertebrate community of removal trapping of signal crayfish from UK rivers. Crayfish were intensively trapped and removed from two tributaries of the River Thames to test the hypothesis that lowering signal crayfish densities would result in increases in macroinvertebrate numbers and taxon richness. We removed 6181 crayfish over four sessions, resulting in crayfish densities that decreased toward the center of the removal sections. Conversely in control sections (where crayfish were trapped and returned), crayfish density increased toward the center of the section. Macroinvertebrate numbers and taxon richness were inversely correlated with crayfish densities. Multivariate analysis of the abundance of each taxon yielded similar results and indicated that crayfish removals had positive impacts on macroinvertebrate numbers and taxon richness but did not alter the composition of the wider macroinvertebrate community. Synthesis and applications: Our results demonstrate that non-eradication-oriented crayfish removal programmes may lead to increases in the total number of macroinvertebrates living in the benthos. This represents the first evidence that removing signal crayfish from riparian systems, at intensities feasible during control attempts or commercial crayfishing, may be beneficial for a range of sympatric aquatic macroinvertebrates.

Antiapoptotic and Antioxidant Properties of Orthosiphon stamineus Benth (Cat's Whiskers): Intervention in the Bcl-2-Mediated Apoptotic Pathway

PubMed Central

Abdelwahab, Siddig Ibrahim; Mohan, Syam; Mohamed Elhassan, Manal; Al-Mekhlafi, Nabil; Mariod, Abdelbasit Adam; Abdul, Ahmad Bustamam; Abdulla, Mahmood Ameen; Alkharfy, Khalid M.

2011-01-01

Antiapoptotic and antioxidant activities of aqueous-methanolic extract (CAME) of Orthosiphonstamineus Benth(OS), and its hexane (HF), chloroform (CF), n-butanol (NBF), ethyl acetate (EAF) and water (WF) fractions were investigated. Antioxidant properties were evaluated using the assays of Folin-Ciocalteu, aluminiumtrichloride, β-carotene bleaching and DPPH. The role of OS against hydrogen peroxide induced apoptosis on MDA-M231 epithelial cells was examined using MTT assay, phase contrast microscope, colorimetric assay of caspase-3, western blot and quantitative real-time PCR. Results showed that EAF showed the highest total phenolic content followed by CAME, NBF, WF, CF and HF, respectively. Flavonoid content was in the order of the CF > EAF > HF > CAME > NBF > WF. The IC50 values on DPPH assay for different extract/fractions were 126.2 ± 23, 31.25 ± 1.2, 15.25 ± 2.3, 13.56 ± 1.9, 23.0 ± 3.2, and 16.66 ± 1.5 μg/ml for HF, CF, EAF, NBF, WF and CAME, respectively. OSreduced the oxidation of β-carotene by hydroperoxides. Cell death was dose-dependently inhibited by pretreatment with OS. Caspase-3 and distinct morphological features suggest the anti-apoptotic activities of OS. This plant not only increased the expression of Bcl-2, but also decreased Bax expression, and ultimately reduced H2O2-induced apoptosis. The current results showed that phenolics may provide health and nutritional benefits. PMID:21234328

Comparing the catch composition, profitability and discard survival from different trammel net designs targeting common spiny lobster (Palinurus elephas) in a Mediterranean fishery.

PubMed

Catanese, Gaetano; Hinz, Hilmar; Gil, Maria Del Mar; Palmer, Miquel; Breen, Michael; Mira, Antoni; Pastor, Elena; Grau, Amalia; Campos-Candela, Andrea; Koleva, Elka; Grau, Antoni Maria; Morales-Nin, Beatriz

2018-01-01

In the Balearic Islands, different trammel net designs have been adopted to promote fisheries sustainability and reduce discards. Here, we compare the catch performance of three trammel net designs targeting the spiny lobster Palinurus elephas in terms of biomass, species composition and revenue from commercial catches and discards. Designs differ in the netting fiber type (standard polyfilament, PMF, or a new polyethylene multi-monofilament, MMF) and the use of a guarding net or greca , a mesh piece intended to reduce discards. Catches were surveyed by an on-board observer from 1,550 netting walls corresponding to 70 nets. The number of marketable species captured indicated that the lobster trammel net fishery has multiple targets, which contribute significantly to the total revenue. The discarded species ranged from habitat-forming species to elasmobranches, but the magnitude of gear-habitat interactions on the long term dynamics of benthos remains unclear. No relevant differences in revenue and weight of discards were detected after Bayesian analyses. However, the species composition of discards was different when using greca . Interestingly, high immediate survival was found for discarded undersized lobsters, while a seven day survival assessment, using captive observation, gave an asymptotic estimate of survival probability as 0.64 (95% CI [0.54-0.76]). Therefore, it is recommended that it would be beneficial for this stock if an exemption from the EU landing obligation regulation was sought for undersized lobsters in the Balearic trammel net fishery.

Expected effects of residual chlorine and nitrogen in sewage effluent on an estuarine pelagic ecosystem

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hattis, D.; Lemerise, A.; Ratick, S.

1995-12-31

The authors used physical, toxicological, and system dynamic modeling tools to estimate the probable ecological effects caused by residual chlorine and nitrogen in sewage effluent discharged into Greenwich Cove, RI, USA. An energy systems model of the pelagic ecosystem in Narragansett Bay was developed and adapted for use in Greenwich Cove. This model allowed them to assess the indirect effects on organisms in the food web that result from a direct toxic effect on a given organism. Indirect food web mediated effects were the primary mode of loss for bluefish, but not for menhaden. The authors chose gross primary production,more » the flux of carbon to the benthos, fish out-migration, and fish harvest as outcome variables indicative of different valuable ecosystem functions. Organism responses were modeled using an assumption that lethal toxic responses occur as individual organism thresholds are exceeded, and that in general thresholds are lognormally distributed in a population of mixed individuals. They performed sensitivity analyses to assess the implications of different plausible values for the probit slopes used in the model. The putative toxic damage repair rate, combined with estimates of the exposure variability for each species, determined the averaging time that was likely to be most important in producing toxicity. Temperature was an important external factor in the physical, toxicological, and ecological models. These three models can be integrated into a single model applicable to other locations and stressors given the availability of appropriate data.« less

Selenium in San Francisco Bay zooplankton: Potential effects of hydrodynamics and food web interactions

USGS Publications Warehouse

Purkerson, D.G.; Doblin, M.A.; Bollens, S.M.; Luoma, S.N.; Cutter, G.A.

2003-01-01

The potential toxicity of elevated selenium (Se) concentrations in aquatic ecosystems has stimulated efforts to measure Se concentrations in benthos, nekton, and waterfowl in San Francisco Bay (SF Bay). In September 1998, we initiated a 14 mo field study to determine the concentration of Se in SF Bay zooplankton, which play a major role in the Bay food web, but which have not previously been studied with respect to Se. Monthly vertical plankton tows were collected at several stations throughout SF Bay, and zooplankton were separated into two operationally defined size classes for Se analyses: 73-2,000 ??m, and ???2,000 ??m. Selenium values ranged 1.02-6.07 ??g Se g-1 dry weight. No spatial differences in zooplankton Se concentrations were found. However, there were inter- and intra-annual differences. Zooplankton Se concentrations were enriched in the North Bay in Fall 1999 when compared to other seasons and locations within and outside SF Bay. The abundance and biovolume of the zooplankton community varied spatially between stations, but not seasonally within each station. Smaller herbivorous-omnivorous zooplankton had higher Se concentrations than larger omnivorous-carnivorous zooplankton. Selenium concentrations in zooplankton were negatively correlated with the proportion of total copepod biovolume comprising the large carnivorous copepod Tortanus dextrilobatus, but positively correlated with the proportion of copepod biovolume comprising smaller copepods of the family Oithonidae, suggesting an important role of trophic level and size in regulating zooplankton Se concentrations.

Influence of Environmental Factors and Human Activity on the Presence of Salmonella Serovars in a Marine Environment

PubMed Central

Martinez-Urtaza, Jaime; Saco, Montserrat; de Novoa, Jacobo; Perez-Piñeiro, Pelayo; Peiteado, Jesus; Lozano-Leon, Antonio; Garcia-Martin, Oscar

2004-01-01

The temporal and spatial distribution of Salmonella contamination in the coastal waters of Galicia (northwestern Spain) relative to contamination events with different environmental factors (temperature, wind, hours of sunlight, rainfall, and river flow) were investigated over a 4-year period. Salmonellae were isolated from 127 of 5,384 samples of molluscs and seawater (2.4%), and no significant differences (P < 0.05) between isolates obtained in different years were observed. The incidence of salmonellae was significantly higher in water column samples (2.9%) than in those taken from the marine benthos (0.7%). Of the 127 strains of Salmonella isolated, 20 different serovars were identified. Salmonella enterica serovar Senftenberg was the predominant serovar, being represented by 54 isolates (42.5%), followed by serovar Typhimurium (19 isolates [15%]) and serovar Agona (12 isolates [9.4%]). Serovar Senftenberg was detected at specific points on the coast and could not be related to any of the environmental parameters analyzed. All serovars except Salmonella serovar Senftenberg were found principally in the southern coastal areas close to the mouths of rivers, and their incidence was associated with high southwestern wind and rainfall. Using multiple logistic regression analysis models, the prevalence of salmonellae was best explained by environmental parameters on the day prior to sampling. Understanding this relationship may be useful for the control of molluscan shellfish harvests, with wind and rainfall serving as triggers for closure. PMID:15066800

Pelagic effects of offshore wind farm foundations in the stratified North Sea

NASA Astrophysics Data System (ADS)

Floeter, Jens; van Beusekom, Justus E. E.; Auch, Dominik; Callies, Ulrich; Carpenter, Jeffrey; Dudeck, Tim; Eberle, Sabine; Eckhardt, André; Gloe, Dominik; Hänselmann, Kristin; Hufnagl, Marc; Janßen, Silke; Lenhart, Hermann; Möller, Klas Ove; North, Ryan P.; Pohlmann, Thomas; Riethmüller, Rolf; Schulz, Sabrina; Spreizenbarth, Stefan; Temming, Axel; Walter, Bettina; Zielinski, Oliver; Möllmann, Christian

2017-08-01

A recent increase in the construction of Offshore Wind Farms (OWFs) has initiated numerous environmental impact assessments and monitoring programs. These focus on sea mammals, seabirds, benthos or demersal fish, but generally ignore any potential effects OWFs may have on the pelagic ecosystem. The only work on the latter has been through modelling analyses, which predict localised impacts like enhanced vertical mixing leading to a decrease in seasonal stratification, as well as shelf-wide changes of tidal amplitudes. Here we provide for the first-time empirical bio-physical data from an OWF. The data were obtained by towing a remotely operated vehicle (TRIAXUS ROTV) through two non-operating OWFs in the summer stratified North Sea. The undulating TRIAXUS transects provided high-resolution CTD data accompanied by oxygen and chlorophyll-a measurements. We provide empirical indication that vertical mixing is increased within the OWFs, leading to a doming of the thermocline and a subsequent transport of nutrients into the surface mixed layer (SML). Nutrients were taken up rapidly because underwater photosynthetically active radiation (PAR) enabled net primary production in the entire water column, especially within submesoscale chlorophyll-a pillars that were observed at regular intervals within the OWF regions. Video Plankton Recorder (VPR) images revealed distinct meroplankton distribution patterns in a copepod-dominated plankton community. Hydroacoustic records did not show any OWF effects on the distribution of pelagic fish. The results of a pre-OWF survey show however, that it is difficult to fully separate the anthropogenic impacts from the natural variability.

Oxygen and evolutionary patterns in the sea: onshore/offshore trends and recent recruitment of deep-sea faunas

NASA Technical Reports Server (NTRS)

Jacobs, D. K.; Lindberg, D. R.

1998-01-01

Over the last 15 years a striking pattern of diversification has been documented in the fossil record of benthic marine invertebrates. Higher taxa (orders) tend to originate onshore, diversify offshore, and retreat into deep-water environments. Previous studies attribute this macroevolutionary pattern to a variety of causes, foremost among them the role of nearshore disturbance in providing opportunities for the evolution of novel forms accorded ordinal rank. Our analysis of the post-Paleozoic record of ordinal first appearances indicates that the onshore preference of ordinal origination occurred only in the Mesozoic prior to the Turonian stage of the Cretaceous, a period characterized by relatively frequent anoxic/dysoxic bottom conditions in deeper marine environments. Later, in the Cretaceous and Cenozoic, ordinal origination of benthic organisms did not occur exclusively, or even preferentially, in onshore environments. This change in environmental pattern of ordinal origination roughly correlates with Late Cretaceous: (i) decline in anoxia/dysoxia in offshore benthic environments; (ii) extinction of faunas associated with dysoxic conditions; (iii) increase in bioturbation with the expansion of deep burrowing forms into offshore environments; and (iv) offshore expansion of bryozoan diversity. We also advance a separate argument that the Cenomanian/Turonian and latest Paleocene global events eliminated much of the deep-water benthos. This requires a more recent origin of modern vent and deep-sea faunas, from shallower water refugia, than the Paleozoic or early Mesozoic origin of these faunas suggested by other workers.

Icebergs, sea ice, blue carbon and Antarctic climate feedbacks

PubMed Central

Fleming, Andrew; Sands, Chester J.; Quartino, Maria Liliana; Deregibus, Dolores

2018-01-01

Sea ice, including icebergs, has a complex relationship with the carbon held within animals (blue carbon) in the polar regions. Sea-ice losses around West Antarctica's continental shelf generate longer phytoplankton blooms but also make it a hotspot for coastal iceberg disturbance. This matters because in polar regions ice scour limits blue carbon storage ecosystem services, which work as a powerful negative feedback on climate change (less sea ice increases phytoplankton blooms, benthic growth, seabed carbon and sequestration). This resets benthic biota succession (maintaining regional biodiversity) and also fertilizes the ocean with nutrients, generating phytoplankton blooms, which cascade carbon capture into seabed storage and burial by benthos. Small icebergs scour coastal shallows, whereas giant icebergs ground deeper, offshore. Significant benthic communities establish where ice shelves have disintegrated (giant icebergs calving), and rapidly grow to accumulate blue carbon storage. When 5000 km2 giant icebergs calve, we estimate that they generate approximately 106 tonnes of immobilized zoobenthic carbon per year (t C yr−1). However, their collisions with the seabed crush and recycle vast benthic communities, costing an estimated 4 × 104 t C yr−1. We calculate that giant iceberg formation (ice shelf disintegration) has a net potential of approximately 106 t C yr−1 sequestration benefits as well as more widely known negative impacts. This article is part of the theme issue ‘The marine system of the West Antarctic Peninsula: status and strategy for progress in a region of rapid change’. PMID:29760118

Evidence of Macroalgal Colonization on Newly Ice-Free Areas following Glacial Retreat in Potter Cove (South Shetland Islands), Antarctica

PubMed Central

Quartino, María Liliana; Deregibus, Dolores; Campana, Gabriela Laura; Latorre, Gustavo Edgar Juan; Momo, Fernando Roberto

2013-01-01

Climate warming has been related to glacial retreat along the Western Antarctic Peninsula. Over the last years, a visible melting of Fourcade Glacier (Potter Cove, South Shetland Islands) has exposed newly ice-free hard bottom areas available for benthic colonization. However, ice melting produces a reduction of light penetration due to an increase of sediment input and higher ice impact. Seventeen years ago, the coastal sites close to the glacier cliffs were devoid of macroalgae. Are the newly ice-free areas suitable for macroalgal colonization? To tackle this question, underwater video transects were performed at six newly ice-free areas with different degree of glacial influence. Macroalgae were found in all sites, even in close proximity to the retreating glacier. We can show that: 1. The complexity of the macroalgal community is positively correlated to the elapsed time from the ice retreat, 2. Algae development depends on the optical conditions and the sediment input in the water column; some species are limited by light availability, 3. Macroalgal colonization is negatively affected by the ice disturbance, 4. The colonization is determined by the size and type of substrate and by the slope of the bottom. As macroalgae are probably one of the main energy sources for the benthos, an expansion of the macroalgal distribution can be expected to affect the matter and energy fluxes in Potter Cove ecosystem. PMID:23484000

Icebergs, sea ice, blue carbon and Antarctic climate feedbacks.

PubMed

Barnes, David K A; Fleming, Andrew; Sands, Chester J; Quartino, Maria Liliana; Deregibus, Dolores

2018-06-28

Sea ice, including icebergs, has a complex relationship with the carbon held within animals (blue carbon) in the polar regions. Sea-ice losses around West Antarctica's continental shelf generate longer phytoplankton blooms but also make it a hotspot for coastal iceberg disturbance. This matters because in polar regions ice scour limits blue carbon storage ecosystem services, which work as a powerful negative feedback on climate change (less sea ice increases phytoplankton blooms, benthic growth, seabed carbon and sequestration). This resets benthic biota succession (maintaining regional biodiversity) and also fertilizes the ocean with nutrients, generating phytoplankton blooms, which cascade carbon capture into seabed storage and burial by benthos. Small icebergs scour coastal shallows, whereas giant icebergs ground deeper, offshore. Significant benthic communities establish where ice shelves have disintegrated (giant icebergs calving), and rapidly grow to accumulate blue carbon storage. When 5000 km 2 giant icebergs calve, we estimate that they generate approximately 10 6 tonnes of immobilized zoobenthic carbon per year (t C yr -1 ). However, their collisions with the seabed crush and recycle vast benthic communities, costing an estimated 4 × 10 4  t C yr -1 We calculate that giant iceberg formation (ice shelf disintegration) has a net potential of approximately 10 6  t C yr -1 sequestration benefits as well as more widely known negative impacts.This article is part of the theme issue 'The marine system of the West Antarctic Peninsula: status and strategy for progress in a region of rapid change'. © 2018 The Authors.

Assessing condition of macroinvertebrate communities and sediment toxicity in the St. Lawrence River at Massena Area-of-Concern

USGS Publications Warehouse

Duffy, Brian T.; Baldigo, Barry P.; Smith, Alexander J.; George, Scott D.; David, Anthony M.

2016-01-01

In 1972, the USA and Canada agreed to restore the chemical, physical, and biological integrity of the Great Lakes ecosystem under the first Great Lakes Water Quality Agreement. In subsequent amendments, part of the St. Lawrence River at Massena, New York and segments of three tributaries, were designated as an Area of Concern (AOC) due to the effects of polychlorinated biphenyls (PCBs), lead and copper contamination, and habitat degradation and resulting impairment to several beneficial uses. Because sediments have been largely remediated, the present study was initiated to evaluate the current status of the benthic macroinvertebrate (benthos) beneficial use impairment (BUI). Benthic macroinvertebrate communities and sediment toxicity tests using Chironomus dilutus were used to test the hypotheses that community condition and sediment toxicity at AOC sites were not significantly different from those of adjacent reference sites. Grain size was found to be the main driver of community composition and macroinvertebrate assemblages, and bioassessment metrics did not differ significantly between AOC and reference sites of the same sediment class. Median growth of C. dilutus and its survival in three of the four river systems did not differ significantly in sediments from AOC and reference sites. Comparable macroinvertebrate assemblages and general lack of toxicity across most AOC and reference sites suggest that the quality of sediments should not significantly impair benthic macroinvertebrate communities in most sites in the St. Lawrence River AOC.

Effects of Late-Cenozoic Glaciation on Habitat Availability in Antarctic Benthic Shrimps (Crustacea: Decapoda: Caridea)

PubMed Central

Dambach, Johannes; Thatje, Sven; Rödder, Dennis; Basher, Zeenatul; Raupach, Michael J.

2012-01-01

Marine invertebrates inhabiting the high Antarctic continental shelves are challenged by disturbance of the seafloor by grounded ice, low but stable water temperatures and variable food availability in response to seasonal sea-ice cover. Though a high diversity of life has successfully adapted to such conditions, it is generally agreed that during the Last Glacial Maximum (LGM) the large-scale cover of the Southern Ocean by multi-annual sea ice and the advance of the continental ice sheets across the shelf faced life with conditions, exceeding those seen today by an order of magnitude. Conditions prevailing at the LGM may have therefore acted as a bottleneck event to both the ecology as well as genetic diversity of today's fauna. Here, we use for the first time specific Species Distribution Models (SDMs) for marine arthropods of the Southern Ocean to assess effects of habitat contraction during the LGM on the three most common benthic caridean shrimp species that exhibit a strong depth zonation on the Antarctic continental shelf. While the shallow-water species Chorismus antarcticus and Notocrangon antarcticus were limited to a drastically reduced habitat during the LGM, the deep-water shrimp Nematocarcinus lanceopes found refuge in the Southern Ocean deep sea. The modeling results are in accordance with genetic diversity patterns available for C. antarcticus and N. lanceopes and support the hypothesis that habitat contraction at the LGM resulted in a loss of genetic diversity in shallow water benthos. PMID:23029463

Effects of late-cenozoic glaciation on habitat availability in Antarctic benthic shrimps (Crustacea: Decapoda: Caridea).

PubMed

Dambach, Johannes; Thatje, Sven; Rödder, Dennis; Basher, Zeenatul; Raupach, Michael J

2012-01-01

Marine invertebrates inhabiting the high Antarctic continental shelves are challenged by disturbance of the seafloor by grounded ice, low but stable water temperatures and variable food availability in response to seasonal sea-ice cover. Though a high diversity of life has successfully adapted to such conditions, it is generally agreed that during the Last Glacial Maximum (LGM) the large-scale cover of the Southern Ocean by multi-annual sea ice and the advance of the continental ice sheets across the shelf faced life with conditions, exceeding those seen today by an order of magnitude. Conditions prevailing at the LGM may have therefore acted as a bottleneck event to both the ecology as well as genetic diversity of today's fauna. Here, we use for the first time specific Species Distribution Models (SDMs) for marine arthropods of the Southern Ocean to assess effects of habitat contraction during the LGM on the three most common benthic caridean shrimp species that exhibit a strong depth zonation on the Antarctic continental shelf. While the shallow-water species Chorismus antarcticus and Notocrangon antarcticus were limited to a drastically reduced habitat during the LGM, the deep-water shrimp Nematocarcinus lanceopes found refuge in the Southern Ocean deep sea. The modeling results are in accordance with genetic diversity patterns available for C. antarcticus and N. lanceopes and support the hypothesis that habitat contraction at the LGM resulted in a loss of genetic diversity in shallow water benthos.

Distribution and abundance of freshwater polychaetes, Manayunkia speciosa (Polychaeta), in the Great Lakes with a 70-year case history for western Lake Erie

USGS Publications Warehouse

Schloesser, Don W.

2013-01-01

Manayunkia speciosa has been a taxonomic curiosity for 150 years with little interest until 1977 when it was identified as an intermediate host of a fish parasite (Ceratomyxa shasta) responsible for fish mortalities (e.g., chinook salmon). Manayunkia was first reported in the Great Lakes in 1929. Since its discovery, the taxon has been reported in 50% (20 of 40 studies) of benthos studies published between 1960 and 2007. When found, Manayunkia comprised 2) and Georgian Bay (1790/m2) than in five other areas (mean = 60 to 553/m2) of the lakes. A 70-year history of Manayunkia in western Lake Erie indicates it was not found in 1930, was most abundant in 1961 (mean = 8039, maximum = 67,748/m2), and decreased in successive periods of 1982 (3529, 49,639/m2), 1993 (1876, 25,332/m2), and 2003 (79, 2583/m2). It occurred at 48% of stations in 1961, 58% in 1982, 52% in 1993, and 6% of stations in 2003. In all years, Manayunkia was distributed primarily near the mouth of the Detroit River. Causes for declines in distribution and abundance are unknown, but may be related to pollution-abatement programs that began in the 1970s, and invasion of dreissenid mussels in the late-1980s which contributed to de-eutrophication of western Lake Erie. At present, importance of the long-term decline of Manayunkia in Lake Erie is unknown.

Light attenuation in estuarine mangrove lakes

NASA Astrophysics Data System (ADS)

Frankovich, Thomas A.; Rudnick, David T.; Fourqurean, James W.

2017-01-01

Submerged aquatic vegetation (SAV) cover has declined in brackish lakes in the southern Everglades characterized by low water transparencies, emphasizing the need to evaluate the suitability of the aquatic medium for SAV growth and to identify the light attenuating components that contribute most to light attenuation. Underwater attenuation of downwards irradiance of photosynthetically active radiation (PAR) was determined over a three year period at 42 sites in shallow (<2 m depth) mangrove-surrounded lakes in two sub-estuaries in the coastal Everglades, Florida USA. Turbidity, chromophoric dissolved organic matter (CDOM), and phytoplankton chlorophyll a (chl a) were measured concurrently and their respective contributions to the light attenuation rate were estimated. Light transmission to the benthos relative to literature estimates of minimum requirements for SAV growth indicated that the underwater light environment was often unsuitable for SAV. Light attenuation rates (n = 417) corrected for solar elevation angles ranged from 0.16 m-1 to 9.83 m-1 with a mean of 1.73 m-1. High concentrations of CDOM with high specific light absorption contributed the most to light attenuation followed by turbidity and chl a. CDOM alone sufficiently reduces light transmission beyond the estimated limits for SAV growth, making it difficult for ecosystem managers to increase SAV abundance by management activities. Light limitation of SAV in these areas may be a persistent feature because of their proximity to CDOM source materials from the surrounding mangrove swamp. Increasing freshwater flow into these areas may dilute CDOM concentrations and improve the salinity and light climate for SAV communities.

Case study on rehabilitation of a polluted urban water body in Yangtze River Basin.

PubMed

Wu, Juan; Cheng, Shuiping; Li, Zhu; Guo, Weijie; Zhong, Fei; Yin, Daqiang

2013-10-01

In the past three decades, the fast development of economy and urbanization has caused increasingly severe pollutions of urban water bodies in China. Consequently, eutrophication and deterioration of aquatic ecosystem, which is especially significant for aquatic vegetation, inevitably became a pervasive problem across the Yangtze River Basin. To rehabilitate the degraded urban water bodies, vegetation replanting is an important issue to improve water quality and to rehabilitate ecosystem. As a case study, a representative polluted urban river, Nanfeihe River, in Hefei City, Anhui Province, was chosen to be a rehabilitation target. In October 2009 and May 2010, 13 species of indigenous and prevalent macrophytes, including seven species emergent, one species floating leaved, and five species submersed macrophytes, were planted along the bank slopes and in the river. Through 1.5 years' replanting practice, the water quality and biodiversity of the river had been improved. The concentrations of total nitrogen (TN), total phosphorus (TP), and ammonia nitrogen (NH4 (+)-N) declined by 46.0, 39.5, and 60.4 %, respectively. The species of macrophytes increased from 14 to 60, and the biodiversity of phytoplankton rose significantly in the river (p<0.05). The biomasses of zooplankton and benthos were also improved after the vegetation replanting. The study confirmed that vegetation replanting could alleviate the increasing water pollution and rehabilitate the degraded aquatic ecosystem. The case study would be an example for polluted urban waters restoration in the middle-downstream area of Yangtze River Base.

Structure-forming corals and sponges and their use as fish habitat in Bering Sea submarine canyons.

PubMed

Miller, Robert J; Hocevar, John; Stone, Robert P; Fedorov, Dmitry V

2012-01-01

Continental margins are dynamic, heterogeneous settings that can include canyons, seamounts, and banks. Two of the largest canyons in the world, Zhemchug and Pribilof, cut into the edge of the continental shelf in the southeastern Bering Sea. Here currents and upwelling interact to produce a highly productive area, termed the Green Belt, that supports an abundance of fishes and squids as well as birds and marine mammals. We show that in some areas the floor of these canyons harbors high densities of gorgonian and pennatulacean corals and sponges, likely due to enhanced surface productivity, benthic currents and seafloor topography. Rockfishes, including the commercially important Pacific ocean perch, Sebastes alutus, were associated with corals and sponges as well as with isolated boulders. Sculpins, poachers and pleuronectid flounders were also associated with corals in Pribilof Canyon, where corals were most abundant. Fishes likely use corals and sponges as sources of vertical relief, which may harbor prey as well as provide shelter from predators. Boulders may be equivalent habitat in this regard, but are sparse in the canyons, strongly suggesting that biogenic structure is important fish habitat. Evidence of disturbance to the benthos from fishing activities was observed in these remote canyons. Bottom trawling and other benthic fishing gear has been shown to damage corals and sponges that may be very slow to recover from such disturbance. Regulation of these destructive practices is key to conservation of benthic habitats in these canyons and the ecosystem services they provide.

Status of Biodiversity in the Baltic Sea

PubMed Central

Ojaveer, Henn; Jaanus, Andres; MacKenzie, Brian R.; Martin, Georg; Olenin, Sergej; Radziejewska, Teresa; Telesh, Irena; Zettler, Michael L.; Zaiko, Anastasija

2010-01-01

The brackish Baltic Sea hosts species of various origins and environmental tolerances. These immigrated to the sea 10,000 to 15,000 years ago or have been introduced to the area over the relatively recent history of the system. The Baltic Sea has only one known endemic species. While information on some abiotic parameters extends back as long as five centuries and first quantitative snapshot data on biota (on exploited fish populations) originate generally from the same time, international coordination of research began in the early twentieth century. Continuous, annual Baltic Sea-wide long-term datasets on several organism groups (plankton, benthos, fish) are generally available since the mid-1950s. Based on a variety of available data sources (published papers, reports, grey literature, unpublished data), the Baltic Sea, incl. Kattegat, hosts altogether at least 6,065 species, including at least 1,700 phytoplankton, 442 phytobenthos, at least 1,199 zooplankton, at least 569 meiozoobenthos, 1,476 macrozoobenthos, at least 380 vertebrate parasites, about 200 fish, 3 seal, and 83 bird species. In general, but not in all organism groups, high sub-regional total species richness is associated with elevated salinity. Although in comparison with fully marine areas the Baltic Sea supports fewer species, several facets of the system's diversity remain underexplored to this day, such as micro-organisms, foraminiferans, meiobenthos and parasites. In the future, climate change and its interactions with multiple anthropogenic forcings are likely to have major impacts on the Baltic biodiversity. PMID:20824189

Ammonite habitat revealed via isotopic composition and comparisons with co-occurring benthic and planktonic organisms

NASA Astrophysics Data System (ADS)

Sessa, Jocelyn Anne; Larina, Ekaterina; Knoll, Katja; Garb, Matthew; Cochran, J. Kirk; Huber, Brian T.; MacLeod, Kenneth G.; Landman, Neil H.

2015-12-01

Ammonites are among the best-known fossils of the Phanerozoic, yet their habitat is poorly understood. Three common ammonite families (Baculitidae, Scaphitidae, and Sphenodiscidae) co-occur with well-preserved planktonic and benthic organisms at the type locality of the upper Maastrichtian Owl Creek Formation, offering an excellent opportunity to constrain their depth habitats through isotopic comparisons among taxa. Based on sedimentary evidence and the micro- and macrofauna at this site, we infer that the 9-m-thick sequence was deposited at a paleodepth of 70-150 m. Taxa present throughout the sequence include a diverse assemblage of ammonites, bivalves, and gastropods, abundant benthic foraminifera, and rare planktonic foraminifera. No stratigraphic trends are observed in the isotopic data of any taxon, and thus all of the data from each taxon are considered as replicates. Oxygen isotope-based temperature estimates from the baculites and scaphites overlap with those of the benthos and are distinct from those of the plankton. In contrast, sphenodiscid temperature estimates span a range that includes estimates of the planktonic foraminifera and of the warmer half of the benthic values. These results suggest baculites and scaphites lived close to the seafloor, whereas sphenodiscids sometimes inhabited the upper water column and/or lived closer to shore. In fact, the rarity and poorer preservation of the sphenodiscids relative to the baculites and scaphites suggests that the sphenodiscid shells may have only reached the Owl Creek locality by drifting seaward after death.

Behavior and Potential Impacts of Metal-Based Engineered Nanoparticles in Aquatic Environments

PubMed Central

Peng, Cheng; Zhang, Wen; Gao, Haiping; Li, Yang; Tong, Xin; Li, Kungang; Zhu, Xiaoshan; Wang, Yixiang; Chen, Yongsheng

2017-01-01

The specific properties of metal-based nanoparticles (NPs) have not only led to rapidly increasing applications in various industrial and commercial products, but also caused environmental concerns due to the inevitable release of NPs and their unpredictable biological/ecological impacts. This review discusses the environmental behavior of metal-based NPs with an in-depth analysis of the mechanisms and kinetics. The focus is on knowledge gaps in the interaction of NPs with aquatic organisms, which can influence the fate, transport and toxicity of NPs in the aquatic environment. Aggregation transforms NPs into micrometer-sized clusters in the aqueous environment, whereas dissolution also alters the size distribution and surface reactivity of metal-based NPs. A unique toxicity mechanism of metal-based NPs is related to the generation of reactive oxygen species (ROS) and the subsequent ROS-induced oxidative stress. Furthermore, aggregation, dissolution and ROS generation could influence each other and also be influenced by many factors, including the sizes, shapes and surface charge of NPs, as well as the pH, ionic strength, natural organic matter and experimental conditions. Bioaccumulation of NPs in single organism species, such as aquatic plants, zooplankton, fish and benthos, is summarized and compared. Moreover, the trophic transfer and/or biomagnification of metal-based NPs in an aquatic ecosystem are discussed. In addition, genetic effects could result from direct or indirect interactions between DNA and NPs. Finally, several challenges facing us are put forward in the review. PMID:28336855

Long-term effects of mechanical harvesting of lugworms Arenicola marina on the zoobenthic community of a tidal flat in the Wadden Sea

NASA Astrophysics Data System (ADS)

Beukema, J. J.

More than half of the annual catch of about 30 million lugworms Arenicola marina from the Dutch Wadden Sea originates from digging machines which make 40-cm deep guilles in a few restricted tidal-flat areas (Texel, Balgzand) in the westernmost part of the Wadden Sea. Four successive years (1978-1982) of frequent disturbance by a lugworm dredge of one of the 15 sampling stations involved in a long-term study of the dynamics of the macrozoobenthos on Balgzand allowed a study of long-term effects of mechanical lugworm digging. Within an area of about 1 km 2, a near-doubling of the annual lugworm mortality rate resulted in a gradual and substantial decline of the local lugworm stock from more than twice the overall Balgzand mean at the start of the 4-year digging period to a value close to this mean at the end of the period (when the dredge moved to a richer area). Simultaneously, total zoobenthic biomass declined even more by the almost complete extinction of the population of larger gaper clams Mya arenaria that initially comprised half of the total biomass. Of the other, mostly short-lived, species only Heteromastus filiformis showed a clear reduction during the dredging period. Recovery of the biomass of the benthos took several years, particularly by the slow re-establishment of a Mya population with a normal size and age structure.

Structure-Forming Corals and Sponges and Their Use as Fish Habitat in Bering Sea Submarine Canyons

PubMed Central

Miller, Robert J.; Hocevar, John; Stone, Robert P.; Fedorov, Dmitry V.

2012-01-01

Continental margins are dynamic, heterogeneous settings that can include canyons, seamounts, and banks. Two of the largest canyons in the world, Zhemchug and Pribilof, cut into the edge of the continental shelf in the southeastern Bering Sea. Here currents and upwelling interact to produce a highly productive area, termed the Green Belt, that supports an abundance of fishes and squids as well as birds and marine mammals. We show that in some areas the floor of these canyons harbors high densities of gorgonian and pennatulacean corals and sponges, likely due to enhanced surface productivity, benthic currents and seafloor topography. Rockfishes, including the commercially important Pacific ocean perch, Sebastes alutus, were associated with corals and sponges as well as with isolated boulders. Sculpins, poachers and pleuronectid flounders were also associated with corals in Pribilof Canyon, where corals were most abundant. Fishes likely use corals and sponges as sources of vertical relief, which may harbor prey as well as provide shelter from predators. Boulders may be equivalent habitat in this regard, but are sparse in the canyons, strongly suggesting that biogenic structure is important fish habitat. Evidence of disturbance to the benthos from fishing activities was observed in these remote canyons. Bottom trawling and other benthic fishing gear has been shown to damage corals and sponges that may be very slow to recover from such disturbance. Regulation of these destructive practices is key to conservation of benthic habitats in these canyons and the ecosystem services they provide. PMID:22470486

The Influence of Coral Reef Benthic Condition on Associated Fish Assemblages

PubMed Central

Chong-Seng, Karen M.; Mannering, Thomas D.; Pratchett, Morgan S.; Bellwood, David R.; Graham, Nicholas A. J.

2012-01-01

Accumulative disturbances can erode a coral reef’s resilience, often leading to replacement of scleractinian corals by macroalgae or other non-coral organisms. These degraded reef systems have been mostly described based on changes in the composition of the reef benthos, and there is little understanding of how such changes are influenced by, and in turn influence, other components of the reef ecosystem. This study investigated the spatial variation in benthic communities on fringing reefs around the inner Seychelles islands. Specifically, relationships between benthic composition and the underlying substrata, as well as the associated fish assemblages were assessed. High variability in benthic composition was found among reefs, with a gradient from high coral cover (up to 58%) and high structural complexity to high macroalgae cover (up to 95%) and low structural complexity at the extremes. This gradient was associated with declining species richness of fishes, reduced diversity of fish functional groups, and lower abundance of corallivorous fishes. There were no reciprocal increases in herbivorous fish abundances, and relationships with other fish functional groups and total fish abundance were weak. Reefs grouping at the extremes of complex coral habitats or low-complexity macroalgal habitats displayed markedly different fish communities, with only two species of benthic invertebrate feeding fishes in greater abundance in the macroalgal habitat. These results have negative implications for the continuation of many coral reef ecosystem processes and services if more reefs shift to extreme degraded conditions dominated by macroalgae. PMID:22870294

Variability of kokanee and rainbow trout food habits, distribution, and population dynamics, in an ultraoligotrophic lake with no manipulative management

USGS Publications Warehouse

Buktenica, M.W.; Girdner, S.F.; Larson, G.L.; McIntire, C.D.

2007-01-01

Crater Lake is a unique environment to evaluate the ecology of introduced kokanee and rainbow trout because of its otherwise pristine state, low productivity, absence of manipulative management, and lack of lotic systems for fish spawning. Between 1986 and 2004, kokanee displayed a great deal of variation in population demographics with a pattern that reoccurred in about 10 years. We believe that the reoccurring pattern resulted from density dependent growth, and associated changes in reproduction and abundance, driven by prey resource limitation that resulted from low lake productivity exacerbated by prey consumption when kokanee were abundant. Kokanee fed primarily on small-bodied prey from the mid-water column; whereas rainbow trout fed on large-bodied prey from the benthos and lake surface. Cladoceran zooplankton abundance may be regulated by kokanee. And kokanee growth and reproductive success may be influenced by the availability of Daphnia pulicaria, which was absent in zooplankton samples collected annually from 1990 to 1995, and after 1999. Distribution and diel migration of kokanee varied over the duration of the study and appeared to be most closely associated with prey availability, maximization of bioenergetic efficiency, and fish density. Rainbow trout were less abundant than were kokanee and exhibited less variation in population demographics, distribution, and food habits. There is some evidence that the population dynamics of rainbow trout were in-part related to the availability of kokanee as prey. ?? 2007 Springer Science+Business Media B.V.

Nursery function of coastal temperate benthic habitats: New insight from the bivalve recruitment perspective

NASA Astrophysics Data System (ADS)

Barbier, Pierrick; Meziane, Tarik; Forêt, Martin; Tremblay, Réjean; Robert, René; Olivier, Frédéric

2017-03-01

Marine habitat function has been typically investigated in terms of biogeochemical regulation but rarely in terms of population renewal, which is mainly controlled by recruitment dynamics. The recruitment phase is crucial for organisms with a bentho-pelagic life cycle, such as bivalves, and it regulates the population renewal success. This study provides new insight on the role of temperate benthic habitats on bivalve recruitment, as a function of nursery areas. Six dominant benthic habitats of the Chausey archipelago (Normandy, France) were studied. In each habitat, bivalve recruit assemblages were described at the end of two reproductive seasons. Furthermore, Ostrea edulis juveniles were immerged on each habitat during two months to compare growth performances and feeding status, estimated by fatty acid composition. Recruit assemblages differ from each habitat according to sediment grain-size composition and bathymetrical levels. Subtidal habitats, and especially Crepidula fornicata banks and Glycymeris glycymeris coarse sands, supported the highest species abundance and richness of recruits. All O. edulis juveniles fed on the same trophic resources but digestive glands of juveniles from C. fornicata banks were more concentrated in total fatty acids than those from subtidal G. glycymeris coarse sands and maerl banks. Our results depict the key role of subtidal and structured habitats, composed of ecosystem engineers, in enhancing bivalve recruitment and extending the bivalve population renewal. This study suggests that the crucial role of these habitats as bivalve nurseries must be integrated in management perspectives. 2-column fitting image. 1-column fitting image.

Patterns in reef fish assemblages: Insights from the Chagos Archipelago.

PubMed

Samoilys, Melita; Roche, Ronan; Koldewey, Heather; Turner, John

2018-01-01

Understanding the drivers of variability in the composition of fish assemblages across the Indo-Pacific region is crucial to support coral reef ecosystem resilience. Whilst numerous relationships and feedback mechanisms between the functional roles of coral reef fishes and reef benthic composition have been investigated, certain key groups, such as the herbivores, are widely suggested to maintain reefs in a coral-dominated state. Examining links between fishes and reef benthos is complicated by the interactions between natural processes, disturbance events and anthropogenic impacts, particularly fishing pressure. This study examined fish assemblages and associated benthic variables across five atolls within the Chagos Archipelago, where fishing pressure is largely absent, to better understand these relationships. We found high variability in fish assemblages among atolls and sites across the archipelago, especially for key groups such as a suite of grazer-detritivore surgeonfish, and the parrotfishes which varied in density over 40-fold between sites. Differences in fish assemblages were significantly associated with variable levels of both live and recently dead coral cover and rugosity. We suggest these results reflect differing coral recovery trajectories following coral bleaching events and a strong influence of 'bottom-up' control mechanisms on fish assemblages. Species level analyses revealed that Scarus niger, Acanthurus nigrofuscus and Chlorurus strongylocephalos were key species driving differences in fish assemblage structure. Clarifying the trophic roles of herbivorous and detritivorous reef fishes will require species-level studies, which also examine feeding behaviour, to fully understand their contribution in maintaining reef resilience to climate change and fishing impacts.

Phenology of the McMurdo Sound Spring Bloom

NASA Astrophysics Data System (ADS)

Daly, K. L.; Kim, S.; Broadbent, H.; Saenz, B.; Ainley, D. G.; Ballard, G.; Pitman, R.; DiTullio, G. R.

2016-02-01

The phenology of spring blooms in most cases has important consequences for the food web that supports upper trophic level predators. An investigation during spring/summer of 2012/13 and 2014/15 of the McMurdo Sound ecosystem, at the southern end of the Ross Sea, revealed that maximum concentrations of fast ice algae occurred during November, with higher concentrations on the eastern side of the Sound near Ross Island and lower concentrations on the western side in the cold water outflow from under the Ross Ice Shelf. In early to mid-December, warming surface water ablated the undersurface of the fast ice and ice algae likely sank rapidly out of the water column to provide food for the benthos. Also in early to mid-December, the McMurdo system transitioned to a phytoplankton bloom at the fast ice edge and under the ice, which co-occurred with the timing of Adelie penguin reproduction (chick hatching) at Cape Royds and the arrival of minke whales and fish-eating killer whales at the fast ice edge. The phytoplankton bloom was initially advected from the Ross Sea into the eastern side of McMurdo Sound and then spread across the Sound to the western side. The phytoplankton community, which was dominated by diatoms and Phaeocystis, was not grazed down by zooplankton and appeared to sink out of the water column. Results support recent findings that a wasp-waist food web structure exists in the Ross Sea, whereby upper trophic levels are not closely coupled to phytoplankton dynamics.

The environmental impacts of three different queen scallop (Aequipecten opercularis) fishing gears.

PubMed

Hinz, Hilmar; Murray, Lee G; Malcolm, Fraser R; Kaiser, Michel J

2012-02-01

The negative impact of demersal fishing gears on the marine environment may be mitigated by utilizing less damaging fishing gears. Within this context three queen scallop fishing gears were tested for their catch efficiencies and their environmental impact on benthos: a traditional 'Newhaven' dredge, a new dredge design with a rubber lip instead of the traditional teeth as its main new design feature and an otter trawl. Both, the new dredge and the otter trawl showed high catches and relatively low by-catches. Catches made with the traditional dredge were lower and contained larger amounts of non-target species. Both dredges primarily caught invertebrate species, while by-catches of the otter trawl were dominated by demersal fish. The impact of these gears on the benthic biota demonstrated that while no effects were detected for the otter trawl both dredges showed similar negative effects. Clear negative effects were evident for the brittlestar Ophiura ophiura while positive trends for the common starfish Asterias rubens and the hermit crab Pagurus bernhardus indicated scavenging effects. Due to its higher catch efficiency the new dredge caused less damage per unit catch compared to the traditional dredge, yet compared to the otter trawl it appears less environmentally friendly. However, the new dredge may be an alternative to the otter trawls for fisheries where the by-catch of demersal fish has been identified as a significant problem. Copyright © 2011 Elsevier Ltd. All rights reserved.

Testing of various membranes for use in a novel sediment porewater isolation chamber for infaunal invertebrate exposure to PCBs.

PubMed

Coleman, Jessica G; Lotufo, Guilherme R; Kennedy, Alan J; Poda, Aimee R; Rushing, Todd S; Ruiz, Carlos E; Bridges, Todd S

2014-07-01

In benthic sediment bioassays, determining the relative contribution to exposure by contaminants in overlying water, porewater, and sediment particles is technically challenging. The purpose of the present study was to assess the potential for membranes to be utilized as a mechanism to allow freely dissolved hydrophobic organic contaminants into a pathway isolation exposure chamber (PIC) while excluding all sediment particles and dissolved organic carbon (DOC). This investigation was conducted in support of a larger effort to assess contaminant exposure pathways to benthos. While multiple passive samplers exist for estimating concentrations of contaminants in porewater such as those using solid-phase micro extraction (SPME) and polyoxymethylene (POM), techniques to effectively isolate whole organism exposure to porewater within a sediment system are not available. We tested the use of four membranes of different pore sizes (0.1-1.2μm) including nylon, polycarbonate, polyethylsulfone, and polytetrafluoroethylene with a hydrophilic coating. Exposures included both diffusion of radiolabeled and non-labeled contaminants across membranes from aqueous, sediment slurry, and whole sediment sources to assess and evaluate the best candidate membrane. Data generated from the present study was utilized to select the most suitable membrane for use in the larger bioavailability project which sought to assess the relevance of functional ecology in bioavailability of contaminated sediments at remediation sites. The polytetrafluoroethylene membrane was selected for use in the PIC, although exclusion of dissolved organic carbon was not achieved. Published by Elsevier Ltd.

The influence of coral reef benthic condition on associated fish assemblages.

PubMed

Chong-Seng, Karen M; Mannering, Thomas D; Pratchett, Morgan S; Bellwood, David R; Graham, Nicholas A J

2012-01-01

Accumulative disturbances can erode a coral reef's resilience, often leading to replacement of scleractinian corals by macroalgae or other non-coral organisms. These degraded reef systems have been mostly described based on changes in the composition of the reef benthos, and there is little understanding of how such changes are influenced by, and in turn influence, other components of the reef ecosystem. This study investigated the spatial variation in benthic communities on fringing reefs around the inner Seychelles islands. Specifically, relationships between benthic composition and the underlying substrata, as well as the associated fish assemblages were assessed. High variability in benthic composition was found among reefs, with a gradient from high coral cover (up to 58%) and high structural complexity to high macroalgae cover (up to 95%) and low structural complexity at the extremes. This gradient was associated with declining species richness of fishes, reduced diversity of fish functional groups, and lower abundance of corallivorous fishes. There were no reciprocal increases in herbivorous fish abundances, and relationships with other fish functional groups and total fish abundance were weak. Reefs grouping at the extremes of complex coral habitats or low-complexity macroalgal habitats displayed markedly different fish communities, with only two species of benthic invertebrate feeding fishes in greater abundance in the macroalgal habitat. These results have negative implications for the continuation of many coral reef ecosystem processes and services if more reefs shift to extreme degraded conditions dominated by macroalgae.

Pollution-induced community tolerance in benthic macroinvertebrates of a mildly lead-contaminated lake.

PubMed

Oguma, Andrew Y; Klerks, Paul L

2017-08-01

Pollution-induced community tolerance (PICT) has been used to demonstrate effects of sediment contamination on microbes and meiofauna. Our study explored the potential to detect PICT in benthic macroinvertebrates of a lake with long-term mild lead (Pb) contamination. We collected macrobenthos from two areas in Caddo Lake, Texas, a control area (CO) with a mean sediment Pb level of 11 μg/g and Goose Prairie (GP) where sediment Pb levels averaged 74 μg/g. Upon return to the laboratory, we exposed macroinvertebrates to a lethal lead concentration and assessed 48-h mortality. Mortality of CO macrobenthos was significantly higher than that of GP macrobenthos, providing evidence that these communities differed in their tolerance to lead. A comparison of macrobenthos community composition between the areas showed that the GP macrobenthos lacked metal-sensitive taxa such as gastropods and amphipods (which were present at CO). Similarly, a higher proportion of the GP benthos belonged to metal-tolerant taxa such as isopods and chironomids. Thus, changes in community composition appeared to be at least partly responsible for differences in community tolerance. Our results showed that a sediment Pb concentration below effect-based sediment quality guidelines had a measurable impact on macrobenthos, thus demonstrating that results from single-species toxicity tests may underestimate impacts on communities. This study also confirms that the PICT approach with macroinvertebrates is a feasible and potentially powerful approach for detecting contaminant impacts.

Intensive removal of signal crayfish (Pacifastacus leniusculus) from rivers increases numbers and taxon richness of macroinvertebrate species

PubMed Central

Moorhouse, Tom P; Poole, Alison E; Evans, Laura C; Bradley, David C; Macdonald, David W

2014-01-01

Invasive species are a major cause of species extinction in freshwater ecosystems, and crayfish species are particularly pervasive. The invasive American signal crayfish Pacifastacus leniusculus has impacts over a range of trophic levels, but particularly on benthic aquatic macroinvertebrates. Our study examined the effect on the macroinvertebrate community of removal trapping of signal crayfish from UK rivers. Crayfish were intensively trapped and removed from two tributaries of the River Thames to test the hypothesis that lowering signal crayfish densities would result in increases in macroinvertebrate numbers and taxon richness. We removed 6181 crayfish over four sessions, resulting in crayfish densities that decreased toward the center of the removal sections. Conversely in control sections (where crayfish were trapped and returned), crayfish density increased toward the center of the section. Macroinvertebrate numbers and taxon richness were inversely correlated with crayfish densities. Multivariate analysis of the abundance of each taxon yielded similar results and indicated that crayfish removals had positive impacts on macroinvertebrate numbers and taxon richness but did not alter the composition of the wider macroinvertebrate community. Synthesis and applications: Our results demonstrate that non-eradication-oriented crayfish removal programmes may lead to increases in the total number of macroinvertebrates living in the benthos. This represents the first evidence that removing signal crayfish from riparian systems, at intensities feasible during control attempts or commercial crayfishing, may be beneficial for a range of sympatric aquatic macroinvertebrates. PMID:24634733

The use of satellite tags to redefine movement patterns of spiny dogfish (Squalus acanthias) along the U.S. east coast: implications for fisheries management.

PubMed

Carlson, Amy E; Hoffmayer, Eric R; Tribuzio, Cindy A; Sulikowski, James A

2014-01-01

Spiny dogfish (Squalus acanthias) are assumed to be a highly migratory species, making habitual north-south migrations throughout their northwestern Atlantic United States (U.S.) range. Also assumed to be a benthic species, spiny dogfish stock structure is estimated through Northeast Fisheries Science Center (NEFSC) bottom-trawl surveys. Recent anomalies in population trends, including a recent four-fold increase in estimated spawning stock biomass, suggest alternative movement patterns could exist for this shark species. To obtain a better understanding of the horizontal and vertical movement dynamics of this species, Microwave Telemetry pop-up satellite archival X-Tags were attached to forty adult spiny dogfish at the northern (Gulf of Maine) and southern (North Carolina) extents of their core U.S. geographic range. Reconstructed geolocation tracks ranging in lengths from two to 12 months suggest that the seasonal migration patterns appear to be local in nature to each respective northern and southern deployment site, differing from previously published migration paradigms. Differences in distance and direction traveled between seasonal geolocations possibly indicate separate migratory patterns between groups. Kernel utilization distribution models also suggest strong separate core home ranges. Significant differences in seasonal temperature and depths between the two regions further substantiate the possibility of separate regional movement patterns between the two groups. Vertical utilization also suggests distinct diel patterns and that this species may not utilize the benthos as previously thought, potentially decreasing availability to benthic gear.

The Use of Satellite Tags to Redefine Movement Patterns of Spiny Dogfish (Squalus acanthias) along the U.S. East Coast: Implications for Fisheries Management

PubMed Central

Carlson, Amy E.; Hoffmayer, Eric R.; Tribuzio, Cindy A.; Sulikowski, James A.

2014-01-01

Spiny dogfish (Squalus acanthias) are assumed to be a highly migratory species, making habitual north-south migrations throughout their northwestern Atlantic United States (U.S.) range. Also assumed to be a benthic species, spiny dogfish stock structure is estimated through Northeast Fisheries Science Center (NEFSC) bottom-trawl surveys. Recent anomalies in population trends, including a recent four-fold increase in estimated spawning stock biomass, suggest alternative movement patterns could exist for this shark species. To obtain a better understanding of the horizontal and vertical movement dynamics of this species, Microwave Telemetry pop-up satellite archival X-Tags were attached to forty adult spiny dogfish at the northern (Gulf of Maine) and southern (North Carolina) extents of their core U.S. geographic range. Reconstructed geolocation tracks ranging in lengths from two to 12 months suggest that the seasonal migration patterns appear to be local in nature to each respective northern and southern deployment site, differing from previously published migration paradigms. Differences in distance and direction traveled between seasonal geolocations possibly indicate separate migratory patterns between groups. Kernel utilization distribution models also suggest strong separate core home ranges. Significant differences in seasonal temperature and depths between the two regions further substantiate the possibility of separate regional movement patterns between the two groups. Vertical utilization also suggests distinct diel patterns and that this species may not utilize the benthos as previously thought, potentially decreasing availability to benthic gear. PMID:25068584

Diet, feeding patterns, and prey selection of subyearling Atlantic salmon (Salmo salar) and subyearling chinook salmon (Oncorhynchus tshawytscha) in a tributary of Lake Ontario

USGS Publications Warehouse

Johnson, J. H.; Nash, K. J.; Chiavelli, R. A.; DiRado, J. A.; Mackey, G. E.; Knight, J. R.; Diaz, A. R.

2017-01-01

Since juvenile Atlantic salmon (Salmo salar) and Chinook salmon (Oncorhynchus tshawytscha) occupy a similar habitat in Lake Ontario tributaries, we sought to determine the degree of diet similarity between these species in order to assess the potential for interspecific competition. Atlantic salmon, an historically important but currently extirpated component of the Lake Ontario fish community, are the focus of a bi-national restoration effort. Presently this effort includes the release of hatchery produced juvenile Atlantic salmon in Lake Ontario tributaries. These same tributaries support substantial numbers of naturally reproduced juvenile Pacific salmonids including Chinook salmon. Subyearling Atlantic salmon and subyearling Chinook salmon had significantly different diets during each of the three time periods examined. Atlantic salmon fed slightly more from the benthos than from the drift and consumed mainly chirononmids (47.0%) and ephemeropterans (21.1%). The diet of subyearling Chinook salmon was more closely associated with the drift and consisted mainly of chironomids (60.2%) and terrestrial invertebrates (16.0%). Low diet similarity between subyearling Atlantic salmon and subyearling Chinook salmon likely minimizes competitive interactions for food between these species in Lake Ontario tributaries. However, the availability of small prey such as chironomids which comprise over 50% of the diet of each species, soon after emergence, could constitute a short term resource limitation. To our knowledge this is the first study of interspecific diet associations between these two important salmonid species.

Water quality, isoscapes and stoichioscapes of seagrasses indicate general P limitation and unique N cycling in shallow water benthos of Bermuda

NASA Astrophysics Data System (ADS)

Fourqurean, J. W.; Manuel, S. A.; Coates, K. A.; Kenworthy, W. J.; Boyer, J. N.

2015-07-01

Striking spatial patterns in stable isotope ratios (isoscapes) and elemental ratios (stoichioscapes) of seagrass leaves and the water column nutrients indicate general P-limitation of both water column and benthic primary productivity on the Bermuda Platform, and they highlight the role of the Bermuda Islands as a source of N and P. We found consistent differences among the four seagrass species (Syringodium filiforme, Thalassia testudinum, Halodule sp. and Halophila decipiens) in the N, P, δ13C and δ15N of leaf tissues. The δ15N of seagrass leaves was especially variable, with values from -10.1 to 8.8‰, greatly expanding the reported range of values for all seagrass species globally. Spatial patterns from both the water column and the seagrass leaves indicated that P availability was higher near shore, and δ15N values suggest this was likely a result of human waste disposal. Spatially-contiguous areas of extremely depleted seagrass δ15N suggest unique N sources and cycling compared to other seagrass-dominated environments. Seagrass N : P values were not as far from the stoichiometric balance between N and P availability as in the water column, and there were no strong relationships between the water column N : P and the seagrass N : P. Such isoscapes and stoichioscapes provide valuable ecogeochemical tools to infer ecosystem processes as well as provide information that can inform food web and animal movement studies.

Water quality, isoscapes and stoichioscapes of seagrasses indicate general P limitation and unique N cycling in shallow water benthos of Bermuda

NASA Astrophysics Data System (ADS)

Fourqurean, J. W.; Manuel, S. A.; Coates, K. A.; Kenworthy, W. J.; Boyer, J. N.

2015-10-01

Striking spatial patterns in stable isotope ratios (isoscapes) and elemental ratios (stoichioscapes) of seagrass leaves and the water column nutrients indicate general P-limitation of both water column and benthic primary productivity on the Bermuda Platform, and they highlight the role of the Bermuda Islands as a source of N and P. We found consistent differences among the four seagrass species (Syringodium filiforme, Thalassia testudinum, Halodule sp. and Halophila decipiens) in the N, P, δ13C and δ15N of leaf tissues. The δ15N of seagrass leaves was especially variable, with values from -10.1 to 8.8 ‰, greatly expanding the reported range of values for all seagrass species globally. Spatial patterns from both the water column and the seagrass leaves indicated that P availability was higher near shore, and δ15N values suggest this was likely a result of human waste disposal. Spatially contiguous areas of extremely depleted seagrass 15N suggest unique N sources and cycling compared to other seagrass-dominated environments. Seagrass N : P values were not as far from the stoichiometric balance between N and P availability as in the water column, and there were no strong relationships between the water column N : P and the seagrass N : P. Such isoscapes and stoichioscapes provide valuable ecogeochemical tools to infer ecosystem processes as well as provide information that can inform food web and animal movement studies.

Environmental impact of bleufin tuna aquaculture on benthic assemblages in the western coast of Baja California, Mexico

NASA Astrophysics Data System (ADS)

Diaz-Castaneda, V.

2013-05-01

Sea-cage farming results in a constant rain of organic waste onto the surrounding benthos. In Baja California there is growing concern over the effects of sea-cages on the local environment: sediment chemistry and benthic communities. Samples were taken in 18 stations using a Van veen grab (0.1 m2) in Bahía Salsipuedes, Baja California in 2003, 2004, 2006 and 2008. Organisms belonging to 7 Phyla were collected: Polychaeta, Mollusca, Crustacea, Echinodermata, Cnidaria, Sipuncula and Bryozoa. Polychaetes were the dominant group followed by crustaceans and mollusks. Polychaetes were represented by 37 families and 157 species. Best represented families were Paraonidae, Cirratulidae, Spionidae, Glyceridae and Maldanidae. This study shows that in the NW area of the bay organic carbon (2.54%) and organic nitrogen (0.95%) are being accumulated (higher concentrations and lower Eh values) and smaller opportunistic species are increasing rapidly near the tuna pens. It is crucial to maintain "healthy" macrofaunal populations in order to enhance decomposition of organic matter and to prevent its excessive accumulation. The most abundant polychaete species were Aphelochaeta multifinis, Mediomastus ambiseta, Prionospio steenstrupi Spiophanes bombyx, Apoprionospio pygnaea, Paraonella sp, Monticellina sp, Aricidea (Allia) ramosa, Spiophanes bombyx and Levinsenia gracilis. The dominant trophic groups were deposit-feeders and carnivores. The buildup of organic matter on the seafloor has attracted scavenger species particularly peracarid crustaceans. Non-metric multidimensional scaling (MDS) separated stations depending of the distance to the tuna pens.

Ecotoxicological effects of a semi-submerged municipal dump (Castle harbour, Bermuda) on the Calico scallop Argopecten gibbus.

PubMed

Quinn, Brian; Gagné, Francois; Weber, Jean-Philippe; Blaise, Christian

2005-01-01

A biomarker study was undertaken using the Calico scallop Argopecten gibbus to assess the ecotoxicological effects of a semi-submerged municipal dump on the adjacent patch reef lagoon ecosystem (Castle harbour, Bermuda). Caged scallops were deployed in situ for 2 months at various distances from the dump (50 m, 900 m and 2.7 km) and at a reference site (14 km). A suite of biomarkers comprising metallothionein (MT), lipid peroxidation (LPO), vitellin-like proteins (Vn), glutathione S-transferase (GST), DNA strand breaks and condition factor (CF) were investigated in various tissues of the scallop (gill, digestive gland and gonad). Levels of heavy metals were also measured in the whole scallop soft tissue. While there was some variation in response between tissues, in general the results indicated that the dump was negatively impacting scallops deployed in the adjacent marine environment: elevated levels of MT, DNA strand breaks, Vn and GST and reduced condition factor were found for scallops deployed nearest to the dump and at the site 1.5 km from this point source of contamination (Tuckers town) in Castle harbour, with respect to the reference site, North Rock (although this exhibited some degree of metal contamination). The gills from scallops deployed at the dump site were the most responsive tissue, with the highest expression of MT, LPO and DNA damage. This study indicates the potential of the Calico scallop as a convenient bioindicator species in the marine tropical benthos.

Toxicity of sediments from a mangrove forest patch in an urban area in Pernambuco (Brazil).

PubMed

Oliveira, D D; Souza-Santos, L P; Silva, H K P; Macedo, S J

2014-06-01

Industrial and urban residues are discharged every day to the rivers and may arrive at the mangrove forest and prejudice the quality of the environment and the organisms present there. The mangrove forest patch studied is encircled by an urban area of the city of Recife (Brazil) that has approximate 1.5 million inhabitants and is one of the most industrialized centers in Northeast Brazil. The aim of this study was to assess the quality of the sediments of this mangrove patch in terms of metal contamination and ecotoxicology. Samples of surface sediment were collected in six stations for toxicological tests and trace metal determination (Cr, Zn, Mn, Fe, Cu, Pb, Co and Ni), in July and August, 2006 (rainy season); and in January and February 2007 (dry season). Toxicity tests with solid-phase sediments were carried out with the copepod Tisbe biminiensis in order to observe lethal and sub-lethal endpoints and correlate them with chemical data. In June, there were no observed lethal effect, but two stations presented sub-lethal effects. In January, lethal effect occurred in three stations and sub-lethal in one station. The levels for Zn and Cr were at higher levels than international proposed guidelines (NOAA). There was a negative significant correlation between the copepods׳ fecundity, and Zn and Cr concentrations. Therefore, the studied sediments can be considered to have potential toxic to benthos due to the high content of Zn and Cr. Copyright © 2014 Elsevier Inc. All rights reserved.

Evaluation of body weight of sea cucumber Apostichopus japonicus by computer vision

NASA Astrophysics Data System (ADS)

Liu, Hui; Xu, Qiang; Liu, Shilin; Zhang, Libin; Yang, Hongsheng

2015-01-01

A postichopus japonicus (Holothuroidea, Echinodermata) is an ecological and economic species in East Asia. Conventional biometric monitoring method includes diving for samples and weighing above water, with highly variable in weight measurement due to variation in the quantity of water in the respiratory tree and intestinal content of this species. Recently, video survey method has been applied widely in biometric detection on underwater benthos. However, because of the high flexibility of A. japonicus body, video survey method of monitoring is less used in sea cucumber. In this study, we designed a model to evaluate the wet weight of A. japonicus, using machine vision technology combined with a support vector machine (SVM) that can be used in field surveys on the A. japonicus population. Continuous dorsal images of free-moving A. japonicus individuals in seawater were captured, which also allows for the development of images of the core body edge as well as thorn segmentation. Parameters that include body length, body breadth, perimeter and area, were extracted from the core body edge images and used in SVM regression, to predict the weight of A. japonicus and for comparison with a power model. Results indicate that the use of SVM for predicting the weight of 33 A. japonicus individuals is accurate ( R 2=0.99) and compatible with the power model ( R 2 =0.96). The image-based analysis and size-weight regression models in this study may be useful in body weight evaluation of A. japonicus in lab and field study.

On the biology and food of small-sized fish from North and Baltic Sea areas. IV. Investigations on an eulittoral mud flat at Sylt Island

NASA Astrophysics Data System (ADS)

Zander, C. Dieter; Hartwig, Eike

1982-03-01

The fish fauna of an eulittoral mud flat was investigated at Sylt Island (North Sea) with special regard to its food uptake. During the course of a year the following species were caught: Pomatoschistus microps, Anguilla anguilla (elvers), Zoarces viviparus, and Gasterosteus aculeatus. Considering the potentially available food, the most abundant organisms of the benthos were harpacticoids and nematodes, whereas in the phytal layer gastropods and gammarids were dominant. The benthic biomass was found to be greatest in spring, while phytal organisms were most abundant in late summer. The greatest fish density was stated in September 1974 though only P. microps was present. The fish biomass was highest in spring when the elvers appeared. The main food of P. microps was epibenthos; in the diet of A. anguilla phytal organisms dominated over epibenthos, in G. aculeatus suprabenthic organisms were also present. The most prominent food component by biomass was gammarids in all investigated fish, whereas harpacticoids were only dominant in number. During the course of the year the biomass of ingested food yielded highest values in summer and autumn, but lowest in winter. A very great predatory activity was found in September 1974, which possibly caused a grazing effect on harpacticoids. An estimation of the turnover rate of small-sized fish in this month led to a value of 70 mg dry weight m-2 · d-1.

Integrated Sr isotope variations and global environmental changes through the Late Permian to early Late Triassic

NASA Astrophysics Data System (ADS)

Song, Haijun; Wignall, Paul B.; Tong, Jinnan; Song, Huyue; Chen, Jing; Chu, Daoliang; Tian, Li; Luo, Mao; Zong, Keqing; Chen, Yanlong; Lai, Xulong; Zhang, Kexin; Wang, Hongmei

2015-08-01

New 87Sr/86Sr data based on 127 well-preserved and well-dated conodont samples from South China were measured using a new technique (LA-MC-ICPMS) based on single conodont albid crown analysis. These reveal a spectacular climb in seawater 87Sr/86Sr ratios during the Early Triassic that was the most rapid of the Phanerozoic. The rapid increase began in Bed 25 of the Meishan section (GSSP of the Permian-Triassic boundary, PTB), and coincided closely with the latest Permian extinction. Modeling results indicate that the accelerated rise of 87Sr/86Sr ratios can be ascribed to a rapid increase (>2.8×) of riverine flux of Sr caused by intensified weathering. This phenomenon could in turn be related to an intensification of warming-driven runoff and vegetation die-off. Continued rise of 87Sr/86Sr ratios in the Early Triassic indicates that continental weathering rates were enhanced >1.9 times compared to those of the Late Permian. Continental weathering rates began to decline in the middle-late Spathian, which may have played a role in the decrease of oceanic anoxia and recovery of marine benthos. The 87Sr/86Sr values decline gradually into the Middle Triassic to an equilibrium values around 1.2 times those of the Late Permian level, suggesting that vegetation coverage did not attain pre-extinction levels thereby allowing higher runoff.

Temporally intensive study of trace metals in sediments and bivalves from a large river-estuarine system: Suisun Bay/delta in San Francisco Bay

USGS Publications Warehouse

Luoma, S.N.; Dagovitz, R.; Axtmann, E.

1990-01-01

Distributions in time and space of Ag, Cd, Cr, Cu, Pb and Zn were determined in fine-grained sediments and in the filter-feeding bivalve Corbicula sp. of Suisun Bay/delta at the mouth of the Sacramento and San Joaquin Rivers in North San Francisco Bay. Samples were collected from seven stations at near-monthly intervals for 3 years. Aggregated data showed little chronic contamination with Ag, Zn and Pb in the river and estuary. Substantial chronic contamination with Cd, Cu and Cr in Suisun Bay/delta occurred, especially in Corbicula, compared with the lower San Joaquin River. Salinity appeared to have secondary effects, if any, on metal concentrations in sediments and metal bioavailability to bivalves. Space/time distributions of Cr were controlled by releases from a local industry. Analyses of time series suggested substantial inputs of Cu might originate from the Sacramento River during high inflows to the Bay, and Cd contamination had both riverine and local sources. Concentrations of metals in sediments correlated with concentrations in Corbicula only in annually or 3-year aggregated data. Condition index for Corbicula was reduced where metal contamination was most severe. The biological availability of Cu and Cd to benthos was greater in Suisun Bay than in many other estuaries. Thus small inputs into this system could have greater impacts than might occur elsewhere; and organisms were generally more sensitive indicators of enrichment than sediments in this system.

Rapid sea-level change in the Late Guadalupian (Permian) on the Tethyan side of South China: litho- and biostratigraphy of the Chaotian section in Sichuan

PubMed Central

Isozaki, Yukio; Yao, Jianxin; Ji, Zhangshen; Saitoh, Masafumi; Kobayashi, Noritada; Sakai, Harutaka

2008-01-01

The Capitanian (Late Guadalupian) Maokou Formation at Chaotian in northern Sichuan, South China, is composed mainly of shallow marine shelf carbonates deposited on the Tethyan side of South China. By detailed field mapping and scientific drilling, we newly found out unique fossil assemblages and a sharp lithologic change in the upper part of the Maokou Formation. The main part of the Maokou Formation (over 130 m thick) is composed of algal packstone with Wordian-Capitanian large-tested fusulines, rugose corals and other sessile benthos, whereas the Uppermost Member (13 m thick) is composed of black limy mudstone/chert with Capitanian offshore biota (ammonoids, radiolarians, and conodonts). The topmost Capitanian conodont zones are missing; however, the Maokou Formation is disconformably overlain by 260 ± 4 Ma volcanic ash (Wangpo bed) and the Early Lopingian Wujiaping Formation with plant-bearing coaly mudstone and shallow marine carbonates (packstone). The newly identified facies change indicates that northern Sichuan has experienced rapid sea-level changes in the late Guadalupian, i.e., first a transgression in the mid-Capitanian and then a regression across the Guadalupian-Lopingian boundary. As the end-Guadalupian is characterized by a global regression, such a volatile sea-level fluctuation, in particular the sea-level rise, is unique to the Tethyan side of South China. The newly recognized relatively deep-water late Guadalupian sequence adds new paleo-environmental information and further provides a paleotectonic interpretation of the low-latitude eastern Tethyan margin immediately before the end-Guadalupian mass extinction. PMID:18941307

Patterns in reef fish assemblages: Insights from the Chagos Archipelago

PubMed Central

Roche, Ronan; Koldewey, Heather; Turner, John

2018-01-01

Understanding the drivers of variability in the composition of fish assemblages across the Indo-Pacific region is crucial to support coral reef ecosystem resilience. Whilst numerous relationships and feedback mechanisms between the functional roles of coral reef fishes and reef benthic composition have been investigated, certain key groups, such as the herbivores, are widely suggested to maintain reefs in a coral-dominated state. Examining links between fishes and reef benthos is complicated by the interactions between natural processes, disturbance events and anthropogenic impacts, particularly fishing pressure. This study examined fish assemblages and associated benthic variables across five atolls within the Chagos Archipelago, where fishing pressure is largely absent, to better understand these relationships. We found high variability in fish assemblages among atolls and sites across the archipelago, especially for key groups such as a suite of grazer-detritivore surgeonfish, and the parrotfishes which varied in density over 40-fold between sites. Differences in fish assemblages were significantly associated with variable levels of both live and recently dead coral cover and rugosity. We suggest these results reflect differing coral recovery trajectories following coral bleaching events and a strong influence of ‘bottom-up’ control mechanisms on fish assemblages. Species level analyses revealed that Scarus niger, Acanthurus nigrofuscus and Chlorurus strongylocephalos were key species driving differences in fish assemblage structure. Clarifying the trophic roles of herbivorous and detritivorous reef fishes will require species-level studies, which also examine feeding behaviour, to fully understand their contribution in maintaining reef resilience to climate change and fishing impacts. PMID:29351566

Rapid sea-level change in the Late Guadalupian (Permian) on the Tethyan side of South China: litho- and biostratigraphy of the Chaotian section in Sichuan.

PubMed

Isozaki, Yukio; Yao, Jianxin; Ji, Zhangshen; Saitoh, Masafumi; Kobayashi, Noritada; Sakai, Harutaka

2008-01-01

The Capitanian (Late Guadalupian) Maokou Formation at Chaotian in northern Sichuan, South China, is composed mainly of shallow marine shelf carbonates deposited on the Tethyan side of South China. By detailed field mapping and scientific drilling, we newly found out unique fossil assemblages and a sharp lithologic change in the upper part of the Maokou Formation. The main part of the Maokou Formation (over 130 m thick) is composed of algal packstone with Wordian-Capitanian large-tested fusulines, rugose corals and other sessile benthos, whereas the Uppermost Member (13 m thick) is composed of black limy mudstone/chert with Capitanian offshore biota (ammonoids, radiolarians, and conodonts). The topmost Capitanian conodont zones are missing; however, the Maokou Formation is disconformably overlain by 260+/-4 Ma volcanic ash (Wangpo bed) and the Early Lopingian Wujiaping Formation with plant-bearing coaly mudstone and shallow marine carbonates (packstone). The newly identified facies change indicates that northern Sichuan has experienced rapid sea-level changes in the late Guadalupian, i.e., first a transgression in the mid-Capitanian and then a regression across the Guadalupian-Lopingian boundary. As the end-Guadalupian is characterized by a global regression, such a volatile sea-level fluctuation, in particular the sea-level rise, is unique to the Tethyan side of South China. The newly recognized relatively deep-water late Guadalupian sequence adds new paleo-environmental information and further provides a paleotectonic interpretation of the low-latitude eastern Tethyan margin immediately before the end-Guadalupian mass extinction.

Tidal river sediments in the Washington, D.C. area. 111 Biological effects associated with sediment contamination

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schlekat, C.E.; McGee, B.L.; Boward, D.M.

1994-06-01

Sediment toxicity and benthic marcroinvertebrate community structure were measured as one component of a study conceived to determine the distribution and effect of sediment contamination in tidal freshwater portions of the Potomac and Anacostia rivers in the Washington, D.C., area. Samples were collected at 15 sites. Analyses included a partial life cycle (28 d) whole sediment test using the amphipod Hyalella azteca (Talitridae) and an assessment of benthic community structure. Survival and growth (as estimated by amphipod length) were experimental endpoints for the toxicity test. Significant mortality was observed in 5 to 10 sites in the lower Anacostia River basinmore » and at the main channel Potomac River site. Sublethal toxicity, as measured by inhibition of amphipod growth, was not observed. Toxicity test results were in general agreement with synoptically measured sediment contaminant concentrations. Porewater total ammonia (NH{sub 3} + NH{sub 4}{sup +}) appears to be responsible for the toxicity of sediments from the Potomac River, while correlation analysis and simultaneously extracted metals: acid volatile sulfide (SEM:AVA) results suggest that the toxicity associated with Anacostia River sediments was due to organic compounds. Twenty-eight macroinvertebrate taxa were identified among all sites, with richness varying from 5 to 17 taxa per site. Groups of benthic assemblages identified by group-average cluster analysis exhibited variable agreement with sediment chemical and sediment toxicity results. Integration of toxicological, chemical, and ecological components suggests that adverse environmental effects manifest in lower Anacostia River benthos result from chemical contamination of sediment. 37 refs., 2 figs., 7 tabs.« less

Biological integrity in mid-atlantic coastal plains headwater streams.

PubMed

Megan, Mehaffey H; Nash, Maliha S; Neale, Anne C; Pitchford, Ann M

2007-01-01

The objective of this study was to assess the applicability of using landscape variables in conjunction with water quality and benthic data to efficiently estimate stream condition of select headwater streams in the Mid-Atlantic Coastal Plains. Eighty-two streams with riffle sites were selected from eight-two independent watersheds across the region for sampling and analyses. Clustering of the watersheds by landscape resulted in three distinct groups (forest, crop, and urban) which coincided with watersheds dominant land cover or use. We used non-parametric analyses to test differences in benthos and water chemistry between groups, and used regression analyses to evaluate responses of benthic communities to water chemistry within each of the landscape groups. We found that typical water chemistry measures associated with urban runoff such as specific conductance and dissolved chloride were significantly higher in the urban group. In the crop group, we found variables commonly associated with farming such as nutrients and pesticides significantly greater than in the other two groups. Regression analyses demonstrated that the numbers of tolerant and facultative macroinvertebrates increased significantly in forested watersheds with small shifts in pollutants, while in human use dominated watersheds the intolerant macroinvertebrates were more sensitive to shifts in chemicals present at lower concentrations. The results from this study suggest that landscape based clustering can be used to link upstream landscape characteristics, water chemistry and biotic integrity in order to assess stream condition and likely cause of degradation without the use of reference sites. Notice: Although this work was reviewed by EPA and approved for publication, it may not necessarily reflect official Agency policy.

The Southern Ocean ecosystem under multiple climate change stresses--an integrated circumpolar assessment.

PubMed

Gutt, Julian; Bertler, Nancy; Bracegirdle, Thomas J; Buschmann, Alexander; Comiso, Josefino; Hosie, Graham; Isla, Enrique; Schloss, Irene R; Smith, Craig R; Tournadre, Jean; Xavier, José C

2015-04-01

A quantitative assessment of observed and projected environmental changes in the Southern Ocean (SO) with a potential impact on the marine ecosystem shows: (i) large proportions of the SO are and will be affected by one or more climate change processes; areas projected to be affected in the future are larger than areas that are already under environmental stress, (ii) areas affected by changes in sea-ice in the past and likely in the future are much larger than areas affected by ocean warming. The smallest areas (<1% area of the SO) are affected by glacier retreat and warming in the deeper euphotic layer. In the future, decrease in the sea-ice is expected to be widespread. Changes in iceberg impact resulting from further collapse of ice-shelves can potentially affect large parts of shelf and ephemerally in the off-shore regions. However, aragonite undersaturation (acidification) might become one of the biggest problems for the Antarctic marine ecosystem by affecting almost the entire SO. Direct and indirect impacts of various environmental changes to the three major habitats, sea-ice, pelagic and benthos and their biota are complex. The areas affected by environmental stressors range from 33% of the SO for a single stressor, 11% for two and 2% for three, to <1% for four and five overlapping factors. In the future, areas expected to be affected by 2 and 3 overlapping factors are equally large, including potential iceberg changes, and together cover almost 86% of the SO ecosystem. © 2014 John Wiley & Sons Ltd.

A spatially resolved model of seasonal variations in phytoplankton and clam ( Tapes philippinarum) biomass in Barbamarco Lagoon, Italy

NASA Astrophysics Data System (ADS)

Spillman, C. M.; Hamilton, D. P.; Hipsey, M. R.; Imberger, J.

2008-08-01

Barbamarco Lagoon (area = 7 km 2) is in the Po River Delta, adjoining the Northern Adriatic Sea, and supports a commercially valuable clam ( Tapes philippinarum) fishery. This study investigated interactions of the lagoon with adjacent coastal waters and inland riverine inputs by modelling both the lagoon and the Northern Adriatic Sea, using a coupled three-dimensional (3D) hydrodynamic-ecological model (ELCOM-CAEDYM) adapted to include the clam population. The clam model accounted for carbon (C), nitrogen (N) and phosphorus (P) biomass in the benthos through parameterisations for filtration, excretion, egestion, respiration, mortality, and harvesting. Multiple clam size classes were included in a new population dynamics sub-model. Output from the coupled model was validated against hydrodynamic and water quality data from intensive field sampling and routine monitoring. Time scales of tidal flushing, primary production and clam grazing were investigated with the model to demonstrate that food supply to clam populations is dominated by phytoplankton inputs from the Northern Adriatic Sea. Effects of clam cultivation on nutrient concentrations and phytoplankton biomass in Barbamarco Lagoon were primarily localised, with strong tidal flushing minimising impacts of clam filtration on lagoon-wide nutrient concentrations at current clam stocking levels. Clam populations were found to alter the cycling of nutrients in the system, causing the lagoon to become a net sink for particulate organic matter and to export dissolved organic matter to the adjacent sea via tidal flushing. Ecosystem health and sensitivity of nutrient cycles to clam cultivation are important considerations for the long term sustainable management and potential expansion of the fishery.

Benthic Light Availability Improves Predictions of Riverine Primary Production

NASA Astrophysics Data System (ADS)

Kirk, L.; Cohen, M. J.

2017-12-01

Light is a fundamental control on photosynthesis, and often the only control strongly correlated with gross primary production (GPP) in streams and rivers; yet it has received far less attention than nutrients. Because benthic light is difficult to measure in situ, surrogates such as open sky irradiance are often used. Several studies have now refined methods to quantify canopy and water column attenuation of open sky light in order to estimate the amount of light that actually reaches the benthos. Given the additional effort that measuring benthic light requires, we should ask if benthic light always improves our predictions of GPP compared to just open sky irradiance. We use long-term, high-resolution dissolved oxygen, turbidity, dissolved organic matter (fDOM), and irradiance data from streams and rivers in north-central Florida, US across gradients of size and color to build statistical models of benthic light that predict GPP. Preliminary results on a large, clear river show only modest model improvements over open sky irradiance, even in heavily canopied reaches with pulses of tannic water. However, in another spring-fed river with greater connectivity to adjacent wetlands - and hence larger, more frequent pulses of tannic water - the model improved dramatically with the inclusion of fDOM (model R2 improved from 0.28 to 0.68). River shade modeling efforts also suggest that knowing benthic light will greatly enhance our ability to predict GPP in narrower, forested streams flowing in particular directions. Our objective is to outline conditions where an assessment of benthic light conditions would be necessary for riverine metabolism studies or management strategies.

Characterization of Bacterial, Archaeal and Eukaryote Symbionts from Antarctic Sponges Reveals a High Diversity at a Three-Domain Level and a Particular Signature for This Ecosystem.

PubMed

Rodríguez-Marconi, Susana; De la Iglesia, Rodrigo; Díez, Beatriz; Fonseca, Cássio A; Hajdu, Eduardo; Trefault, Nicole

2015-01-01

Sponge-associated microbial communities include members from the three domains of life. In the case of bacteria, they are diverse, host specific and different from the surrounding seawater. However, little is known about the diversity and specificity of Eukarya and Archaea living in association with marine sponges. This knowledge gap is even greater regarding sponges from regions other than temperate and tropical environments. In Antarctica, marine sponges are abundant and important members of the benthos, structuring the Antarctic marine ecosystem. In this study, we used high throughput ribosomal gene sequencing to investigate the three-domain diversity and community composition from eight different Antarctic sponges. Taxonomic identification reveals that they belong to families Acarnidae, Chalinidae, Hymedesmiidae, Hymeniacidonidae, Leucettidae, Microcionidae, and Myxillidae. Our study indicates that there are different diversity and similarity patterns between bacterial/archaeal and eukaryote microbial symbionts from these Antarctic marine sponges, indicating inherent differences in how organisms from different domains establish symbiotic relationships. In general, when considering diversity indices and number of phyla detected, sponge-associated communities are more diverse than the planktonic communities. We conclude that three-domain microbial communities from Antarctic sponges are different from surrounding planktonic communities, expanding previous observations for Bacteria and including the Antarctic environment. Furthermore, we reveal differences in the composition of the sponge associated bacterial assemblages between Antarctic and tropical-temperate environments and the presence of a highly complex microbial eukaryote community, suggesting a particular signature for Antarctic sponges, different to that reported from other ecosystems.

Estuaries of the northeastern United States: Habitat and land use signatures

USGS Publications Warehouse

Roman, C.T.; Jaworski, N.; Short, F.T.; Findlay, S.; Warren, R.S.

2000-01-01

Geographic signatures are physical, chemical, biotic, and human-induced characteristics or processes that help define similar or unique features of estuaries along latitudinal or geographic gradients. Geomorphologically, estuaries of the northeastern U.S., from the Hudson River estuary and northward along the Gulf of Maine shoreline, are highly diverse because of a complex bedrock geology and glacial history. Back-barrier estuaries and lagoons occur within the northeast region, but the dominant type is the drowned-river valley, often with rocky shores. Tidal range and mean depth of northeast estuaries are generally greater when compared to estuaries of the more southern U.S. Atlantic coast and Gulf of Mexico. Because of small estuarine drainage basins, low riverine flows, a bedrock substrate, and dense forest cover, sediment loads in northeast estuaries are generally quite low and water clarity is high. Tidal marshes, seagrass meadows, intertidal mudflats, and rocky shores represent major habitat types that fringe northeast estuaries, supporting commercially-important fauna, forage nekton and benthos, and coastal bird communities, while also serving as links between deeper estuarine waters and habitats through detritus-based pathways. Regarding land use and water quality trends, portions of the northeast have a history of over a century of intense urbanization as reflected in increased total nitrogen and total phosphorus loadings to estuaries, with wastewater treatment facilities and atmospheric deposition being major sources. Agricultural inputs are relatively minor throughout the northeast, with relative importance increasing for coastal plain estuaries. Identifying geographic signatures provides an objective means for comparing the structure function, and processes of estuaries along latitudinal gradients.

Benthic foraminifera and environmental changes in Long Island Sound

USGS Publications Warehouse

Thomas, E.; Gapotchenko, T.; Varekamp, J.C.; Mecray, E.I.; Buchholtz ten Brink, Marilyn R.

2000-01-01

Benthic foraminiferal faunas in Long Island Sound (LIS) in the 1940s and 1960s were of low diversity, and dominated by species of the genus Elphidium, mainly Elphidium excavatum clavatum, with common Buccella frigida and Eggerella advena. The distribution of these species was dominantly correlated with depth, but it was not clear which depth-related environmental variable was most important. Differences between faunas collected in 1996 and 1997, and in the 1940s and 1960s include a strong decrease in relative abundance of Eggerella advena over all LIS, an increase in relative abundance of Ammonia beccarii in western LIS, and a decrease in species diversity. The decreased diversity suggests that environmental stress caused the faunal changes. Oxygen isotope data for E. excavatum clavatum indicate that a change in salinity is not a probable cause. Carbon isotope data suggest that the supply of organic matter to the benthos increased since the early 1960s, with a stronger increase in western LIS where algal blooms have occurred since the early 1970s, possibly as a result of nutrient input by waste water treatment plants. These blooms or the resulting episodes of anoxia/hypoxia may have played a role in the increased relative abundance of A. beccarii. There is no clear explanation for the decreased abundance of E. advena, but changes in the phytoplankton composition (thus food supply) are a possible cause. Benthic foraminiferal faunal and stable isotope data have excellent potential as indicators of physicochemical environmental changes and their effects on the biota in LIS.

Processing watershed-derived nitrogen in a well-flushed New England estuary

USGS Publications Warehouse

Tobias, C.R.; Cieri, M.; Peterson, B.J.; Deegan, Linda A.; Vallino, J.; Hughes, J.

2003-01-01

Isotopically labeled nitrate (15NO3-) was added continuously to the Rowley estuary, Massachusetts, for 22 d to assess the transport, uptake, and cycling of terrestrially derived nitrogen during a period of high river discharge and low phytoplankton activity. Isotopic enrichment of the 3.5-km tidal prism (150,000 m3) was achieved for the 3 weeks and allowed us to construct a nitrogen mass balance model for the upper estuary. Mean ??15NO3- in the estuary ranged from 300??? to 600???, and approximately 75%-80% of the 15N was exported conservatively as 15NO 3- to the coastal ocean. Essentially all of the 20%-25% of the 15N processed in the estuary occurred in the benthos and was evenly split between direct denitrification and autotrophic assimilation. The lack of water-column 15N uptake was attributed to low phytoplankton stocks and short water residence times (1.2-1.4 d). Uptake of water-column NO3- by benthic autotrophs (enriched in excess of 100???) was a function of NO3- concentration and satisfied up to 15% and 25% of the total nitrogen demand for benthic microalgae and macroalgae, respectively. Approximately 10% of tracer assimilated by benthic autotrophs was mineralized and released back to the water column as 15NH4+. By the end of the study, 15N storage in sediments and marsh macrophytes accounted for 50%-70% of the 15N assimilated in the estuary. These compartments may sequester watershed-derived nitrogen in the estuary for time scales of months to years.

Response of estuarine biofilm microbial community development to changes in dissolved oxygen and nutrient concentrations.

PubMed

Nocker, Andreas; Lepo, Joe Eugene; Martin, Linda Lin; Snyder, Richard Allan

2007-10-01

The information content and responsiveness of microbial biofilm community structure, as an integrative indicator of water quality, was assessed against short-term changes in oxygen and nutrient loading in an open-water estuarine setting. Biofilms were grown for 7-day periods on artificial substrates in the Pensacola Bay estuary, Florida, in the vicinity of a wastewater treatment plant (WWTP) outfall and a nearby reference site. Substrates were deployed floating at the surface and near the benthos in 5.4 m of water. Three sampling events covered a 1-month period coincident with declining seasonal WWTP flow and increasing dissolved oxygen (DO) levels in the bottom waters. Biomass accumulation in benthic biofilms appeared to be controlled by oxygen rather than nutrients. The overriding effect of DO was also seen in DNA fingerprints of community structure by terminal restriction fragment length polymorphism (T-RFLP) of amplified 16S rRNA genes. Ribotype diversity in benthic biofilms at both sites dramatically increased during the transition from hypoxic to normoxic. Terminal restriction fragment length polymorphism patterns showed pronounced differences between benthic and surface biofilm communities from the same site in terms of signal type, strength, and diversity, but minor differences between sites. Sequencing of 16S rRNA gene clone libraries from benthic biofilms at the WWTP site suggested that low DO levels favored sulfate-reducing prokaryotes (SRP), which decreased with rising oxygen levels and increasing overall diversity. A 91-bp ribotype in the CfoI-restricted 16S rRNA gene T-RFLP profiles, indicative of SRP, tracked the decrease in relative SRP abundance over time.

Bioirrigation impacts on sediment respiration and microbial metabolic activity

NASA Astrophysics Data System (ADS)

Baranov, V. A.; Lewandowski, J.; Romeijn, P.; Krause, S.

2015-12-01

Some bioturbators build tubes in the sediment and pump water through their burrows (ventilation). Oxygen is transferred through the burrow walls in the adjacent sediment (bioirrigation). Bioirrigation is playing a pivotal role in the mediation of biogeochemical processes in lake sediments and has the potential to enhance nutrient cycling. The present study investigates the impact of bioirrigation on lake sediment metabolism, respiration rates and in particular, the biogeochemical impacts of bioirrigation intensity as a function of organism density. We therefore apply the bioreactive Resazurin/Resorufin smart tracer system for quantifying the impact of different densities of Chironomidae (Diptera) larvae (0-2112 larvae/m2) on lake sediment respiration in a microcosm experiment. Tracer decay has been found to be proportional to the amount of the aerobic respiration at the sediment-water interface. Tracer transformation was in good agreement with Chironomidae density (correlation, r=0.9). Tracer transformation rates (and sediment respiration) were found to be correlated to Chironomidae density, with highest transformation rates observed in the microcosms with highest density of 2112 larvae/m2. This relationship was not linear though, with sediment respiration rates at the highest larvae densities declining from the linear trend predicted from lower and intermediate larvae density-respiration relationships. We interpret this effect as a density dependent suppression of the Chironomid's metabolic activity. The observations of this study have implications for eutrophied lakes with high densities of bioirrigators. Despite high density of bioirrigirrigating benthos, mineralization of the organic matter in such habitats would likely be lower than in lakes with intermediate densities of the bioturbators.

The “Island Rule” and Deep-Sea Gastropods: Re-Examining the Evidence

PubMed Central

Welch, John J.

2010-01-01

Background One of the most intriguing patterns in mammalian biogeography is the “island rule”, which states that colonising species have a tendency to converge in body size, with larger species evolving decreased sizes and smaller species increased sizes. It has recently been suggested that an analogous pattern holds for the colonisation of the deep-sea benthos by marine Gastropoda. In particular, a pioneering study showed that gastropods from the Western Atlantic showed the same graded trend from dwarfism to gigantism that is evident in island endemic mammals. However, subsequent to the publication of the gastropod study, the standard tests of the island rule have been shown to yield false positives at a very high rate, leaving the result open to doubt. Methodology/Principal Findings The evolution of gastropod body size in the deep sea is reexamined. Using an extended and updated data set, and improved statistical methods, it is shown that some results of the previous study may have been artifactual, but that its central conclusion is robust. It is further shown that the effect is not restricted to a single gastropod clade, that its strength increases markedly with depth, but that it applies even in the mesopelagic zone. Conclusions/Significance The replication of the island rule in a distant taxonomic group and a partially analogous ecological situation could help to uncover the causes of the patterns observed—which are currently much disputed. The gastropod pattern is evident at intermediate depths, and so cannot be attributed to the unique features of abyssal ecology. PMID:20098740

Spatial variability in recruitment of benthos near drilling sites in the Iheya North hydrothermal field in the Okinawa Trough

NASA Astrophysics Data System (ADS)

Nakamura, Masako; Nakajima, Yuichi; Watanabe, Hiromi Kayama; Sasaki, Takenori; Yamamoto, Hiroyuki; Mitarai, Satoshi

2018-05-01

Due to increasing anthropogenic impacts on deep-sea hydrothermal vent ecosystems, it is essential to understand population structure and maintenance through larval recruitment and recovery of vent faunas after disturbances. In this study, we quantified vent animal recruitment in the Okinawa Trough, in the western Pacific Ocean. This is the first study to investigate recruitment patterns at a man-made hydrothermal vent. Colonization plates were deployed at three sites. Site 1 manifested new hydrothermal shimmering with small chimneys, white bacterial mats, and some alvinocaridid shrimp that arrived after drilling. Site 2 showed no evidence of newly arrived foundation species after drilling, and Site 3 had pre-existing animal communities in the vicinity of the new vent. Twenty-two months after deployment, colonization plates were retrieved and recruited animals were inventoried. Species composition and abundance differed among sites, but relatively high similarity in species composition was observed at Sites 1 and 3, though not at Site 2. Newly established communities on the plates at Sites 1 and 2 (no pre-existing fauna) showed lower species richness and abundance than at Site 3. Differences in abundance and size-frequency distributions of major recruits on the plates (i.e. Lepetodrilus nux, Bathymodiolus spp.) suggest the importance of reproductive and early life-history characteristics in spatial variability of recruitment. Lepetodrilus nux populations established on the plates at Site 1 showed high genetic connectivity. These results illustrate the importance of localized recruitment, which may have a significant impact on sustainability of vent faunal populations, despite the existence of regional metapopulations.

Distribution and ecological risk assessment of HCHs and DDTs in surface seawater and sediment of the mariculture area of Jincheng Bay, China

NASA Astrophysics Data System (ADS)

Hu, Yanbing; Sun, Shan; Song, Xiukai; Ma, Jianxin; Ru, Shaoguo

2015-04-01

The distribution of hexachlorocyclohexanes (HCHs) and dichlorodiphenyltrichloroethanes (DDTs) in the surface seawater and sediment of Jincheng Bay mariculture area were investigated in the present study. The concentration of total HCHs and DDTs ranged from 2.98 to 14.87 ng L-1 and were < 0.032 ng L-1, respectively, in surface seawater, and ranged from 5.52 to 9.43 and from 4.11 to 6.72 ng g-1, respectively, in surface sediment. It was deduced from the composition profile of HCH isomers and DDT congeners that HCH residues derived from a mixture of technical-grade HCH and lindane whereas the DDT residues derived from technical-grade DDT and dicofol. Moreover, both HCH and DDT residues may mainly originate from historical inputs. The hazard quotient of α-HCH, β-HCH, γ-HCH and δ-HCH to marine species was 0.030, 0.157, 3.008 and 0.008, respectively. It was estimated that the overall probability of adverse biological effect from HCHs was less than 5%, indicating that its risk to seawater column species was low. The threshold effect concentration exceeding frequency of γ-HCH, p, p'-DDD, p, p'-DDE and p, p'-DDT in sediment ranged from 8.3% to 100%, and the relative concentration of the HCH and DDT mixture exceeded their probable effect level in sediment. These findings indicated that the risk to marine benthos was high and potentially detrimental to the safety of aquatic products, e.g., sea cucumber and benthic shellfish.

Composition, shell strength, and metabolizable energy of Mulinia lateralis and Ischadium recurvum as food for wintering surf scoters (Melanitta perspicillata)

USGS Publications Warehouse

Berlin, Alicia; Perry, Matthew C.; Kohn, R.A.; Paynter, K.T.; Ottinger, Mary Ann

2015-01-01

Decline in surf scoter (Melanitta perspicillata) waterfowl populations wintering in the Chesapeake Bay has been associated with changes in the availability of benthic bivalves. The Bay has become more eutrophic, causing changes in the benthos available to surf scoters. The subsequent decline in oyster beds (Crassostrea virginica) has reduced the hard substrate needed by the hooked mussel (Ischadium recurvum), one of the primary prey items for surf scoters, causing the surf scoter to switch to a more opportune species, the dwarf surfclam (Mulinia lateralis). The composition (macronutrients, minerals, and amino acids), shell strength (N), and metabolizable energy (kJ) of these prey items were quantified to determine the relative foraging values for wintering scoters. Pooled samples of each prey item were analyzed to determine composition. Shell strength (N) was measured using a shell crack compression test. Total collection digestibility trials were conducted on eight captive surf scoters. For the prey size range commonly consumed by surf scoters (6-12 mm for M. lateralis and 18-24 mm for I. recurvum), I. recurvum contained higher ash, protein, lipid, and energy per individual organism than M. lateralis. I. recurvum required significantly greater force to crack the shell relative to M. lateralis. No difference in metabolized energy was observed for these prey items in wintering surf scoters, despite I. recurvum's higher ash content and harder shell than M. lateralis. Therefore, wintering surf scoters were able to obtain the same amount of energy from each prey item, implying that they can sustain themselves if forced to switch prey.

Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera).

PubMed

Vargas, Sergio; Kelly, Michelle; Schnabel, Kareen; Mills, Sadie; Bowden, David; Wörheide, Gert

2015-01-01

The approximately 350 demosponge species that have been described from Antarctica represent a faunistic component distinct from that of neighboring regions. Sponges provide structure to the Antarctic benthos and refuge to other invertebrates, and can be dominant in some communities. Despite the importance of sponges in the Antarctic subtidal environment, sponge DNA barcodes are scarce but can provide insight into the evolutionary relationships of this unique biogeographic province. We sequenced the standard barcoding COI region for a comprehensive selection of sponges collected during expeditions to the Ross Sea region in 2004 and 2008, and produced DNA-barcodes for 53 demosponge species covering about 60% of the species collected. The Antarctic sponge communities are phylogenetically diverse, matching the diversity of well-sampled sponge communities in the Lusitanic and Mediterranean marine provinces in the Temperate Northern Atlantic for which molecular data are readily available. Additionally, DNA-barcoding revealed levels of in situ molecular evolution comparable to those present among Caribbean sponges. DNA-barcoding using the Segregating Sites Algorithm correctly assigned approximately 54% of the barcoded species to the morphologically determined species. A barcode library for Antarctic sponges was assembled and used to advance the systematic and evolutionary research of Antarctic sponges. We provide insights on the evolutionary forces shaping Antarctica's diverse sponge communities, and a barcode library against which future sequence data from other regions or depth strata of Antarctica can be compared. The opportunity for rapid taxonomic identification of sponge collections for ecological research is now at the horizon.

Fish Food in the Deep Sea: Revisiting the Role of Large Food-Falls

PubMed Central

Higgs, Nicholas D.; Gates, Andrew R.; Jones, Daniel O. B.

2014-01-01

The carcasses of large pelagic vertebrates that sink to the seafloor represent a bounty of food to the deep-sea benthos, but natural food-falls have been rarely observed. Here were report on the first observations of three large ‘fish-falls’ on the deep-sea floor: a whale shark (Rhincodon typus) and three mobulid rays (genus Mobula). These observations come from industrial remotely operated vehicle video surveys of the seafloor on the Angola continental margin. The carcasses supported moderate communities of scavenging fish (up to 50 individuals per carcass), mostly from the family Zoarcidae, which appeared to be resident on or around the remains. Based on a global dataset of scavenging rates, we estimate that the elasmobranch carcasses provided food for mobile scavengers over extended time periods from weeks to months. No evidence of whale-fall type communities was observed on or around the carcasses, with the exception of putative sulphide-oxidising bacterial mats that outlined one of the mobulid carcasses. Using best estimates of carcass mass, we calculate that the carcasses reported here represent an average supply of carbon to the local seafloor of 0.4 mg m−2d−1, equivalent to ∼4% of the normal particulate organic carbon flux. Rapid flux of high-quality labile organic carbon in fish carcasses increases the transfer efficiency of the biological pump of carbon from the surface oceans to the deep sea. We postulate that these food-falls are the result of a local concentration of large marine vertebrates, linked to the high surface primary productivity in the study area. PMID:24804731

Ecological Status of a Patagonian Mountain River: Usefulness of Environmental and Biotic Metrics for Rehabilitation Assessment.

PubMed

Laura, Miserendino M; Adriana, M Kutschker; Cecilia, Brand; La Ludmila, Manna; Cecilia, Prinzio Y Di; Gabriela, Papazian; José, Bava

2016-06-01

This work evaluates the consequences of anthropogenic pressures at different sections of a Patagonian mountain river using a set of environmental and biological measures. A map of risk of soil erosion at a basin scale was also produced. The study was conducted at 12 sites along the Percy River system, where physicochemical parameters, riparian ecosystem quality, habitat condition, plants, and macroinvertebrates were investigated. While livestock and wood collection, the dominant activities at upper and mean basin sites resulted in an important loss of the forest cover still the riparian ecosystem remains in a relatively good status of conservation, as do the in-stream habitat conditions and physicochemical features. Besides, most indicators based on macroinvertebrates revealed that both upper and middle basin sections supported similar assemblages, richness, density, and most functional feeding group attributes. Instead, the lower urbanized basin showed increases in conductivity and nutrient values, poor quality in the riparian ecosystem, and habitat condition. According to the multivariate analysis, ammonia level, elevation, current velocity, and habitat conditions had explanatory power on benthos assemblages. Discharge, naturalness of the river channel, flood plain morphology, conservation status, and percent of urban areas were important moderators of plant composition. Finally, although the present land use in the basin would not produce a significant risk of soil erosion, unsustainable practices that promotes the substitution of the forest for shrubs would lead to severe consequences. Mitigation efforts should be directed to protect headwater forest, restore altered riparian ecosystem, and to control the incipient eutrophication process.

Response of benthic invertebrate assemblages to metal exposure and bioaccumulation associated with hard-rock mining in northwestern streams, USA

USGS Publications Warehouse

Maret, T.R.; Cain, D.J.; MacCoy, D.E.; Short, T.M.

2003-01-01

Benthic macroinvertebrate assemblages, environmental variables, and associated mine density were evaluated during the summer of 2000 at 18 reference and test sites in the Coeur d'Alene and St. Regis River basins, northwestern USA as part of the US Geological Survey's National Water-Quality Assessment Program. Concentrations of Cd, Pb, and Zn in water and (or) streambed sediment at test sites in basins where production mine density was ???0.2 mines/km2 (in a 500-m stream buffer) were significantly higher than concentrations at reference sites. Zn and Pb were identified as the primary contaminants in water and streambed sediment, respectively. These metal concentrations often exceeded acute Ambient Water Quality Criteria for aquatic life and the National Oceanic and Atmospheric Administration Probable Effect Level for streambed sediment. Regression analysis identified significant correlations between production mine density in each basin and Zn concentrations in water and Pb in streambed sediment (r2 = 0.69 and 0.65, p < 0.01). Metal concentrations in caddisfly tissue, used to verify site-specific exposures of benthos, also were highest at sites downstream from intensive mining. Benthic invertebrate taxa richness and densities were lower at sites downstream than upstream of areas of intensive hard-rock mining and associated metal enrichment. Benthic invertebrate metrics that were most effective in discriminating changes in assemblage structure between reference and mining sites were total number of taxa, number of Ephemeroptera, Plecoptera, and Trichoptera (EPT) taxa, and densities of total individuals, EPT individuals, and metal-sensitive Ephemeroptera individuals.

How well do we know the infaunal biomass of the continental shelf?

NASA Astrophysics Data System (ADS)

Powell, Eric N.; Mann, Roger

2016-03-01

Benthic infauna comprise a wide range of taxa of varying abundances and sizes, but large infaunal taxa are infrequently recorded in community surveys of the shelf benthos. These larger, but numerically rare, species may contribute disproportionately to biomass, however. We examine the degree to which standard benthic sampling gear and survey design provide an adequate estimate of the biomass of large infauna using the Atlantic surfclam, Spisula solidissima, on the continental shelf off the northeastern coast of the United States as a test organism. We develop a numerical model that simulates standard survey designs, gear types, and sampling densities to evaluate the effectiveness of vertically-dropped sampling gear (e.g., boxcores, grabs) for estimating density of large species. Simulations of randomly distributed clams at a density of 0.5-1 m-2 within an 0.25-km2 domain show that lower sampling densities (1-5 samples per sampling event) resulted in highly inaccurate estimates of clam density with the presence of clams detected in less than 25% of the sampling events. In all cases in which patchiness was present in the simulated clam population, surveys were prone to very large errors (survey availability events) unless a dense (e.g., 100-sample) sampling protocol was imposed. Thus, commercial quantities of surfclams could easily go completely undetected by any standard benthic community survey protocol using vertically-dropped gear. Without recourse to modern high-volume sampling gear capable of sampling many meters at a swath, such as hydraulic dredges, biomass of the continental shelf will be grievously underestimated if large infauna are present even at moderate densities.

Composition, Shell Strength, and Metabolizable Energy of Mulinia lateralis and Ischadium recurvum as Food for Wintering Surf Scoters (Melanitta perspicillata)

PubMed Central

Wells-Berlin, Alicia M.; Perry, Matthew C.; Kohn, Richard A.; Paynter, Kennedy T.; Ottinger, Mary Ann

2015-01-01

Decline in surf scoter (Melanitta perspicillata) waterfowl populations wintering in the Chesapeake Bay has been associated with changes in the availability of benthic bivalves. The Bay has become more eutrophic, causing changes in the benthos available to surf scoters. The subsequent decline in oyster beds (Crassostrea virginica) has reduced the hard substrate needed by the hooked mussel (Ischadium recurvum), one of the primary prey items for surf scoters, causing the surf scoter to switch to a more opportune species, the dwarf surfclam (Mulinia lateralis). The composition (macronutrients, minerals, and amino acids), shell strength (N), and metabolizable energy (kJ) of these prey items were quantified to determine the relative foraging values for wintering scoters. Pooled samples of each prey item were analyzed to determine composition. Shell strength (N) was measured using a shell crack compression test. Total collection digestibility trials were conducted on eight captive surf scoters. For the prey size range commonly consumed by surf scoters (6–12 mm for M. lateralis and 18–24 mm for I. recurvum), I. recurvum contained higher ash, protein, lipid, and energy per individual organism than M. lateralis. I. recurvum required significantly greater force to crack the shell relative to M. lateralis. No difference in metabolized energy was observed for these prey items in wintering surf scoters, despite I. recurvum’s higher ash content and harder shell than M. lateralis. Therefore, wintering surf scoters were able to obtain the same amount of energy from each prey item, implying that they can sustain themselves if forced to switch prey. PMID:25978636

Expanding OBIS beyond species occurrence data, with an extension for environmental data

NASA Astrophysics Data System (ADS)

Appeltans, W.; Provoost, P.; De Pooter, D.; Deneudt, K.; Goldstein, P.; Moncoiffe, G.; Rauch, S.; Nikolopoulou, S.; Van de Putte, A.; Vandepitte, L.; Wambiji, N.; Bailly, N.; Giorgetti, A.; Lewis, M.; Lipizer, M.; Mackay, K.; Roubicek, A.; Torres, C.; De Bruin, T.; Hernandez, F.

2016-02-01

The data collected for biological studies often include more than just biological parameters. Also observations on the habitat and additional physical and chemical measurements are collected to study the organisms in their environment, as may be details regarding the nature of the sampling or observation methods, equipment, and effort. These combined data are needed for the analysis of ecosystem functioning, ecological niche modelling, climate change, etc. However, scientists currently lack internationally agreed standards for managing and sharing these mixed datasets with their peers. If, at best, the data are not lost, the biological observations get often split from the physicochemical data and sent to different data repositories. In March 2015, the International Oceanographic Data and Information Exchange (IODE) Committee of UNESCO's Intergovernmental Oceanographic Commission has established a 2-year pilot project, involving 11 institutions from 10 countries in North-America, South-America, Europe, Africa and Australia. This project aims to develop procedures and guidelines for managing and sharing these mixed datasets, making sure that supporting measurements are curated and distributed alongside the species occurrence data. Moreover, it will investigate how these mixed datasets can flow to national, regional and global data repositories. Eventually, it will demonstrate the benefits of the approach for marine sciences, biological analysis and ecosystem modelling and will support the reproducibility of research. Here we will present a few case studies dealing with e.g. benthos and phytoplankton abundance and biomass data including sediment characteristics, water turbidity, temperature, salinity and dissolved oxygen, as well as biometric data and tracks of marine mammals holding CTD devices.

Sidescan-sonar mapping of benthic trawl marks on the shelf and slope off Eureka, California

USGS Publications Warehouse

Friedlander, A.M.; Boehlert, G.W.; Field, M.E.; Mason, J.E.; Gardner, J.V.; Dartnell, P.

1999-01-01

The abundance and orientation of trawl marks was quantified over an extensive portion (>2700 km2) of the Eureka, California, outer shelf and slope, an important commercial bottom trawling ground for such high-value species as rockfish, sole, and sablefish. Fishing logbook data indicate that the entire reporting area was trawled about one and a half times on an average annual basis and that some areas were trawled over three times annually. High-resolution sidescan-sonar images of the study area revealed deep gouges on the seafloor, caused by heavy steel trawl doors that act to weigh down and spread open the bottom trawls. These trawl marks are commonly oriented parallel to bathymetric contours and many could be traced for several kilometers. Trawl marks showed a quadratic relationship in relation to water depth, with the greatest number of trawl marks observed at ~400 m. There was a significant positive correlation between the number of trawl marks observed on the sidescan images and the number of annual trawl hours logged within reporting areas. This finding indicates that acoustic remote sensing is a promising independent approach to evaluate fishing effort on a scale consistent with commercial fishing activities. Bottom trawling gear is known to modify seafloor habitats by altering benthic habitat complexity and by removing or damaging infauna and sessile organisms. Identifying the extent of trawling in these areas may help determine the effects of this type of fishing gear on the benthos and develop indices of habitat disturbance caused by fishing activities.

Developing national on-line services to annotate and analyse underwater imagery in a research cloud

NASA Astrophysics Data System (ADS)

Proctor, R.; Langlois, T.; Friedman, A.; Davey, B.

2017-12-01

Fish image annotation data is currently collected by various research, management and academic institutions globally (+100,000's hours of deployments) with varying degrees of standardisation and limited formal collaboration or data synthesis. We present a case study of how national on-line services, developed within a domain-oriented research cloud, have been used to annotate habitat images and synthesise fish annotation data sets collected using Autonomous Underwater Vehicles (AUVs) and baited remote underwater stereo-video (stereo-BRUV). Two developing software tools have been brought together in the marine science cloud to provide marine biologists with a powerful service for image annotation. SQUIDLE+ is an online platform designed for exploration, management and annotation of georeferenced images & video data. It provides a flexible annotation framework allowing users to work with their preferred annotation schemes. We have used SQUIDLE+ to sample the habitat composition and complexity of images of the benthos collected using stereo-BRUV. GlobalArchive is designed to be a centralised repository of aquatic ecological survey data with design principles including ease of use, secure user access, flexible data import, and the collection of any sampling and image analysis information. To easily share and synthesise data we have implemented data sharing protocols, including Open Data and synthesis Collaborations, and a spatial map to explore global datasets and filter to create a synthesis. These tools in the science cloud, together with a virtual desktop analysis suite offering python and R environments offer an unprecedented capability to deliver marine biodiversity information of value to marine managers and scientists alike.

Vision and Bioluminescence in the Deep-sea Benthos

NASA Astrophysics Data System (ADS)

Frank, T. M.; Johnsen, S.; Bracken-Grissom, H.; Messing, C. G.; Widder, E.

2016-02-01

During a NOAA-OER funded research cruise, novel collecting techniques were used to collect live, deep-sea benthic animals for studies of bioluminescence and vision. True color images and emission spectra of bioluminescence were obtained from a number of species, including the spiral octocoral Iridogorgia sp., the sea fan Chrysogorgia sp., the sea pen Umbellula sp., and the caridean shrimp Heterocarpus oryx. Electrophysiological studies were conducted on 3 species of decapod crustaceans collected with methods that limited light damage to their photoreceptors. The caridean shrimp, Bathypalaemonella, collected from 1920 m, was always found in association with the bioluminescent spiral octocoral Iridogorgia. While moribund at the surface, enough data were obtained from one specimen to show different waveforms in response to short and long wavelength light, indicative of two different classes of photoreceptor cells. The chirostylid crab, Uroptychus nitidus, found in association with the bioluminescent sea fan, Chrysogorgia sp., also appears to possess two visual pigments, and if further analysis of data supports this preliminary observation, will be the 4th species of deep-sea, non-bioluminescent crustaceans possessing two visual pigments found in association with bioluminescent cnidarians. These four species also share another characteristic - the presence of one or two very long claws, which the crab species are known to use to pick items (possibly plankton stuck in the mucus) off their cnidarian hosts. These data support the previously presented hypothesis (Frank et al. 2012), that these crustaceans may be utilizing their dual visual pigment systems to distinguish between prey and host, based on spectral differences between pelagic and benthic bioluminescence.

Multiple-stressor effects of sediment, phosphorus and nitrogen on stream macroinvertebrate communities.

PubMed

Davis, Stephen J; Ó hUallacháin, Daire; Mellander, Per-Erik; Kelly, Ann-Marie; Matthaei, Christoph D; Piggott, Jeremy J; Kelly-Quinn, Mary

2018-05-10

Multiple stressors affect stream ecosystems worldwide and their interactions are of particular concern, with gaps existing in understanding stressor impacts on stream communities. Addressing these knowledge gaps will aid in targeting and designing of appropriate mitigation measures. In this study, the agricultural stressors fine sediment (ambient, low, medium, high), phosphorus (ambient, enriched) and nitrogen (ambient, enriched) were manipulated simultaneously in 64 streamside mesocosms to determine their individual and combined effects on the macroinvertebrate community (benthos and drift). Stressor levels were chosen to reflect those typically observed in European agricultural streams. A 21-day colonisation period was followed by a 14-day manipulative period. Results indicate that added sediment had the most pervasive effects, significantly reducing total macroinvertebrate abundance, total EPT abundance and abundances of three common EPT taxa. The greatest effect was at high sediment cover (90%), with decreasing negative impacts at medium (50%) and low (30%) covers. Added sediment also led to higher drift propensities for nine of the twelve drift variables. The effects of nitrogen and phosphorus were relatively weak compared to sediment. Several complex and unpredictable 2-way or 3-way interactions among stressors were observed. While sediment addition generally reduced total abundance at high levels, this decrease was amplified by P enrichment at low sediment, whereas the opposite effect occurred at medium sediment and little effect at high sediment. These results have direct implications for water management as they highlight the importance of managing sediment inputs while also considering the complex interactions which can occur between sediment and nutrient stressors. Copyright © 2018 Elsevier B.V. All rights reserved.

Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments

PubMed Central

Bik, Holly M.; Sung, Way; De Ley, Paul; Baldwin, James G.; Sharma, Jyotsna; Rocha-Olivares, Axayácatl; Thomas, W. Kelley

2011-01-01

Summary Microbial eukaryotes (nematodes, protists, fungi, etc., loosely referred to as meiofauna) are ubiquitous in marine sediments and likely play pivotal roles in maintaining ecosystem function. Although the deep-sea benthos represents one of the world’s largest habitats, we lack a firm understanding of the biodiversity and community interactions amongst meiobenthic organisms in this ecosystem. Within this vast environment key questions concerning the historical genetic structure of species remain a mystery, yet have profound implications for our understanding of global biodiversity and how we perceive and mitigate the impact of environmental change and anthropogenic disturbance. Using a metagenetic approach, we present an assessment of microbial eukaryote communities across depth (shallow water to abyssal) and ocean basins (deep-sea Pacific and Atlantic). Within the 12 sites examined, our results suggest that some taxa can maintain eurybathic ranges and cosmopolitan deep-sea distributions, but the majority of species appear to be regionally restricted. For OCTUs reporting wide distributions, there appears to be a taxonomic bias towards a small subset of taxa in most phyla; such bias may be driven by specific life history traits amongst these organisms. In addition, low genetic divergence between geographically disparate deep-sea sites suggests either a shorter coalescence time between deep-sea regions or slower rates of evolution across this vast oceanic ecosystem. While high-throughput studies allow for broad assessment of genetic patterns across microbial eukaryote communities, intragenomic variation in rRNA gene copies and the patchy coverage of reference databases currently present substantial challenges for robust taxonomic interpretations of eukaryotic datasets. PMID:21985648

Cross-habitat effects shape the ecosystem consequences of co-invasion by a pelagic and a benthic consumer.

PubMed

Fryxell, David C; Diluzio, Amber R; Friedman, Maya A; Menge, Nicklaus A; Palkovacs, Eric P

2016-10-01

Invasive species can have major impacts on ecosystems, yet little work has addressed the combined effects of multiple invaders that exploit different habitats. Two common invaders in aquatic systems are pelagic fishes and crayfishes. Pelagic-oriented fish effects are typically strong on the pelagic food web, whereas crayfish effects are strong on the benthic food web. Thus, co-invasion may generate strong ecological responses in both habitats. We tested the effects of co-invasion on experimental pond ecosystems using two widespread invasive species, one pelagic (western mosquitofish) and one benthic (red swamp crayfish). As expected, mosquitofish had strong effects on the pelagic food web, reducing the abundance of Daphnia and causing a strong trophic cascade (increase in phytoplankton). Crayfish had strong effects on the benthic food web, reducing the abundance of benthic filamentous algae. Yet, we also found evidence for important cross-habitat effects. Mosquitofish treatments reduced the biomass of benthic filamentous algae, and crayfish treatments increased Daphnia and phytoplankton abundance. Combined effects of mosquitofish and crayfish were primarily positively or negatively additive, and completely offsetting for some responses, including gross primary production (GPP). Though co-invasion did not affect GPP, it strongly shifted primary production from the benthos into the water column. Effects on snail abundance revealed an interaction; snail abundance decreased only in the presence of both invaders. These results suggest that cross-habitat effects of co-invaders may lead to a variety of ecological outcomes; some of which may be unpredictable based on an understanding of each invader alone.

Marine reserves: fish life history and ecological traits matter.

PubMed

Claudet, J; Osenberg, C W; Domenici, P; Badalamenti, F; Milazzo, M; Falcón, J M; Bertocci, I; Benedetti-Cecchi, L; García-Charton, J A; Goñi, R; Borg, J A; Forcada, A; De Lucia, G A; Perez-Ruzafa, A; Afonso, P; Brito, A; Guala, I; Le Diréach, L; Sanchez-Jerez, P; Somerfield, P J; Planes, S

2010-04-01

Marine reserves are assumed to protect a wide range of species from deleterious effects stemming from exploitation. However, some species, due to their ecological characteristics, may not respond positively to protection. Very little is known about the effects of life history and ecological traits (e.g., mobility, growth, and habitat) on responses of fish species to marine reserves. Using 40 data sets from 12 European marine reserves, we show that there is significant variation in the response of different species of fish to protection and that this heterogeneity can be explained, in part, by differences in their traits. Densities of targeted size-classes of commercial species were greater in protected than unprotected areas. This effect of protection increased as the maximum body size of the targeted species increased, and it was greater for species that were not obligate schoolers. However, contrary to previous theoretical findings, even mobile species with wide home ranges benefited from protection: the effect of protection was at least as strong for mobile species as it was for sedentary ones. Noncommercial bycatch and unexploited species rarely responded to protection, and when they did (in the case of unexploited bentho-pelagic species), they exhibited the opposite response: their densities were lower inside reserves. The use of marine reserves for marine conservation and fisheries management implies that they should ensure protection for a wide range of species with different life-history and ecological traits. Our results suggest this is not the case, and instead that effects vary with economic value, body size, habitat, depth range, and schooling behavior.

Environmentally Non-Disturbing Under-ice Robotic ANtarctiC Explorer (ENDURANCE)

NASA Astrophysics Data System (ADS)

Doran, P. T.; Stone, W.; Priscu, J.; McKay, C.; Johnson, A.; Chen, B.

2007-12-01

Permanently ice-covered liquid water environments are among the leading candidate sites for finding evidence of extant life elsewhere in our solar system (e.g. on Europa and other Galiean satellites, and possibly in subglacial lakes on Mars). In order to have the proper tools and strategies for exploring the extant ice-covered planetary environments, we are developing an autonomous underwater vehicle (AUV) capable of generating for the first time 3-D biogeochemical datasets in the extreme environment of perennially ice-covered Antarctic dry valley lakes. The ENDURANCE (Environmentally Non-Disturbing Under-ice Robotic ANtarctic Explorer) will map the under-ice lake dimensions of West Lake Bonney in the McMurdo Dry Valleys, and be equipped to measure a comprehensive suite of physical and biogeochemical indices in the water column, as well as Raman Spectrometry of the water column and benthos. The AUV is being specifically designed to minimize impact on the environment it is working in. This is primarily to meet strict Antarctic environmental protocols, but will also be useful for planetary protection and improved science in the future. We will carry out two Antarctic field seasons (in concert with our NSF-funded Long Term Ecological Research) and test two central hypotheses: H1: The low kinetic energy of the system (diffusion dominates the spatial transport of constituents) produces an ecosystem and ecosystem limits that vary significantly in three dimensions. H2: The whole-lake physical and biogeochemical structure remains static from year to year The talk will provide an overview of the ENDURANCE project and an update on the AUV development at the time of presentation.

Ecological Status of a Patagonian Mountain River: Usefulness of Environmental and Biotic Metrics for Rehabilitation Assessment

NASA Astrophysics Data System (ADS)

Laura, Miserendino M.; Adriana, M. Kutschker; Cecilia, Brand; La Ludmila, Manna; Cecilia, Prinzio Y. Di; Gabriela, Papazian; José, Bava

2016-06-01

This work evaluates the consequences of anthropogenic pressures at different sections of a Patagonian mountain river using a set of environmental and biological measures. A map of risk of soil erosion at a basin scale was also produced. The study was conducted at 12 sites along the Percy River system, where physicochemical parameters, riparian ecosystem quality, habitat condition, plants, and macroinvertebrates were investigated. While livestock and wood collection, the dominant activities at upper and mean basin sites resulted in an important loss of the forest cover still the riparian ecosystem remains in a relatively good status of conservation, as do the in-stream habitat conditions and physicochemical features. Besides, most indicators based on macroinvertebrates revealed that both upper and middle basin sections supported similar assemblages, richness, density, and most functional feeding group attributes. Instead, the lower urbanized basin showed increases in conductivity and nutrient values, poor quality in the riparian ecosystem, and habitat condition. According to the multivariate analysis, ammonia level, elevation, current velocity, and habitat conditions had explanatory power on benthos assemblages. Discharge, naturalness of the river channel, flood plain morphology, conservation status, and percent of urban areas were important moderators of plant composition. Finally, although the present land use in the basin would not produce a significant risk of soil erosion, unsustainable practices that promotes the substitution of the forest for shrubs would lead to severe consequences. Mitigation efforts should be directed to protect headwater forest, restore altered riparian ecosystem, and to control the incipient eutrophication process.

Stress and recovery of aquatic organisms as related to highway construction along Turtle Creek, Boone County, West Virginia

USGS Publications Warehouse

Chisholm, James L.; Downs, Sanford C.

1978-01-01

During and after construction of Appalachian Corridor G, a divided, four-lane highway, five benthic invertebrate samples were collected at each of four sites on Turtle Creek, and, for comparative purposes, three samples were collected at each of two sites on Lick Creek, an adjacent undisturbed stream. Diversity index, generic count, and total count initially indicated severe depletion or destruction of the benthos of Turtle Creek, but, within 1 year after highway construction was completed, the benthic community of Turtle Creek was similar to that of Lick Creek. The greatest degradation occurred near the headwaters of Turtle Creek because of erratic movement of sediment resulting from high streamflow velocity. Diversity indices ranged from 0 to 3.41 near the headwaters in the original channel, but only from 0.94 to 2.42 farther downstream in a freshly cut channel. The final samples from Turtle Creek, which were similar to those taken from Lick Creek at the same time, had generic counts of 10 at the most upstream site and 16 near the mouth. A total of 147 organisms was found near the headwaters, whereas a total of 668 was found near the mouth of the stream. The total number of organisms collected at each site was proportional to the drainage area upstream from the site. As a result of tributary inflow from unaltered drainage areas and organism drift, rapid repopulation and stabilization of the benthic community occurred. Channel relocation, bank recontouring, and reseeding also accelerated the recovery of the benthic community.

A seascape approach to investigating fish spillover across a marine protected area boundary in Hawai'i

USGS Publications Warehouse

Stamoulis, Kostantinos A.; Friedlander, Alan M.

2013-01-01

Marine protected areas (MPAs) can benefit fisheries through export of pelagic eggs and larvae and the net emigration of adults and juveniles (spillover). Spillover was investigated for a marine protected area on the north shore of Oahu, Hawai‘i utilizing a seascape approach. This study incorporated habitat variables and underwater visual surveys of fishes and benthos measured at two distinct scales (125 m2 and 1000 m2) inside and outside the protected area at varying distance from the boundary. The relationship between fish biomass from fine-scale surveys and key habitat variables was found to account for a large portion of the variability for both resource (targeted) fish species (15%) and non-resource fish (28%). The remaining variation in resource fish biomass was significantly correlated with distance from the MPA boundary showing a decreasing gradient from inside to outside (r2 = 0.46, p = 0.001), indicating fish spillover at a local scale (p = 0.45). The evidence of spillover based on the fine-scale surveys was corroborated by results from broad-scale surveys, which also showed a significant relationship (r2 = 0.19, p < 0.01) between resource fish biomass and distance from the MPA boundary. In addition, observed spatial distribution of fishing effort was consistent with predictions that fishers respond to biomass gradients across protected area boundaries. Fish spillover can help mitigate costs associated with the establishment of marine protected areas in terms of lost fishing area and therefore have a positive effect on the attitudes of fishers toward marine reserves and marine protected areas.

Biological and remote sensing perspectives of pigmentation in coral reef organisms.

PubMed

Hedley, John D; Mumby, Peter J

2002-01-01

Coral reef communities face unprecedented pressures on local, regional and global scales as a consequence of climate change and anthropogenic disturbance. Optical remote sensing, from satellites or aircraft, is possibly the only means of measuring the effects of such stresses at appropriately large spatial scales (many thousands of square kilometres). To map key variables such as coral community structure, percentages of living coral or percentages of dead coral, a remote sensing instrument must be able to distinguish the reflectance spectra (i.e. "spectral signature", reflected light as a function of wavelength) of each category. For biotic classes, reflectance is a complex function of pigmentation, structure and morphology. Studies of coral "colour" fall into two disparate but potentially complementary types. Firstly, biological studies tend to investigate the structure and significance of pigmentation in reef organisms. These studies often lack details that would be useful from a remote sensing perspective such as intraspecific variation in pigment concentration or the contribution of fluorescence to reflectance. Secondly, remote sensing studies take empirical measurements of spectra and seek wavelengths that discriminate benthic categories. Benthic categories used in remote sensing sometimes consist of species groupings that are biologically or spectrally inappropriate (e.g. merging of algal phyla with distinct pigments). Here, we attempt to bridge the gap between biological and remote sensing perspectives of pigmentation in reef taxa. The aim is to assess the extent to which spectral discrimination can be given a biological foundation, to reduce the ad hoc nature of discriminatory criteria, and to understand the fundamental (biological) limitations in the spectral separability of biotic classes. Sources of pigmentation in reef biota are reviewed together with remote sensing studies where spectral discrimination has been effectively demonstrated between benthic categories. The basis of reflectance is considered as the sum of pigmented components, such as zooxanthellae, host tissues and skeletons of corals. Problems in the empirical in situ measurement of reflectance are identified, such as the differing types of reflectance which can be measured, the interaction of the light field with morphology, and depth-dependent variability of measured reflectance due to fluorescence. The latter is estimated in some cases to introduce an error of up to 20% when depth differs by 8 m. Spectral features useful in discriminating reef benthos are identified and related to pigmentation. The slope in the reflectance spectra between 650 and 690 nm is dependent on chlorophyll-a concentration and can be used to discriminate bare sand with no algal component from chlorophyll-a containing benthos (algae, corals). The slope in reflectance at various locations between 500 and 560 nm can be useful in discriminating bleached and unbleached corals, possibly due to reduced peridinin concentration. Rhodophyta may be discernible by the presence of a dip in reflectance at 570 nm, due to a phycoerythrin absorption peak. However, the utility of some discriminatory criteria in deeper waters is mitigated by the relatively poor transmission of light through water at longer wavelengths (especially > 600 nm). Contrary to suggested categorizations of fluorescent pigments in coral host tissues, it is shown that these pigments form an almost continuous distribution with respect to their excitation and emission peaks. Remote sensing by induced fluorescence is a promising approach, but further details about the variation and distribution of these pigments are required. It is hoped that this review will promote cross-disciplinary collaboration between pigment biologists and the reef remote sensing community. Where possible, the discriminative criteria adopted in remote sensing should be related to biological phenomena, thus lending an intuitive, process-orientated basis for interpreting spectral data. Similarly, remote sensing may provide a novel scaling perspective to biological studies of pigmentation in reef organisms.

Quantification of the nitrogen cycle in a prairie stream

USGS Publications Warehouse

Dodds, Walter K.; Evans-White, Michelle A.; Gerlanc, Nicole M.; Gray, Lawrence; Gudder, Dolly A.; Kemp, Melody J.; Lopez, Amanda L.; Stagliano, David; Strauss, Eric A.; Tank, Jennifer L.; Whiles, Matt R.; Wollheim, Wilfred M.

2000-01-01

Nitrogen (N) was added for 35 days in the form of 15NH4Cl to Kings Creek on Konza Prairie, Kansas. Standing stocks of N in key compartments (that is, nutrients, detritus, organisms) were quantified, and the amount of labeled N entering the compartments was analyzed. These data were used to calculate turnover and flux rates of N cycling through the food web, as well as nutrient transformation rates. Inorganic N pools turned over much more rapidly in the water column of this stream than in pelagic systems where comparable measurements have been made. As with other systems, the mass of ammonium was low but it was the key compartment mediating nutrient flux through the ecosystem, whereas dissolved organic N, the primary component of N flux through the system, is not actively cycled. Nitrification was also a significant flux of N in the stream, with rates in the water column and surface of benthos accounting for approximately 10% of the total ammonium uptake. Primary consumers assimilated 67% of the inorganic N that entered benthic algae and microbes. Predators acquired 23% of the N that consumers obtained. Invertebrate collectors, omnivorous crayfish (Orconectes spp.), and invertebrate shredders dominated the N flux associated with primary consumers. Mass balance calculations indicated that at least 23% of the 309 mg of 15N added during the 35 days of release was retained within the 210-m stream reach during the release. Overall, the rates of turnover of N in organisms and organic substrata were significantly greater when C:N was low. This ratio may be a surrogate for biological activity with regard to N flux in streams.

Reproductive traits of tropical deep-water pandalid shrimps ( Heterocarpus ensifer) from the SW Gulf of Mexico

NASA Astrophysics Data System (ADS)

Briones-Fourzán, Patricia; Barradas-Ortíz, Cecilia; Negrete-Soto, Fernando; Lozano-Álvarez, Enrique

2010-08-01

Heterocarpus ensifer is a tropical deep-water pandalid shrimp whose reproductive features are poorly known. We examined reproductive traits of a population of H. ensifer inhabiting the continental slope (311-715 m in depth) off the Yucatan Peninsula, Mexico (SW Gulf of Mexico). Size range of the total sample ( n=816) was 10.4-38.9 mm carapace length. Females grow larger than males, but both sexes mature at 57% of their maximum theoretical size and at ˜30% of their total lifespan. Among adult females, the proportion of ovigerous females was high in all seasons, indicating year-round reproduction. Most females carrying embryos in advanced stages of development had ovaries in advanced stages of maturation, indicating production of successive spawns. In the autumn, however, the proportion of ovigerous females and the condition index of these females were lower compared to other seasons. This pattern potentially reflects a reduction in food resources following the summer minimum in particulate organic carbon flux to the deep benthos, as reported in previous studies. Spawns consisting of large numbers (16024±5644, mean±SD) of small eggs (0.045±0.009 mm 3) are consistent with extended planktotrophic larval development, an uncommon feature in deep-water carideans. Egg number increased as a power function of female size but with substantial variability, and egg size varied widely within and between females. There was no apparent trade-off between egg number and egg size and neither of these two variables was influenced by female condition. These results indicate iteroparity and a high and variable reproductive effort, reflecting a reproductive strategy developed to compensate for high larval mortality. The present study provides a baseline to compare reproductive traits between Atlantic populations of this tropical deep-water pandalid.

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

PubMed Central

Hajibabaei, Mehrdad; Shokralla, Shadi; Zhou, Xin; Singer, Gregory A. C.; Baird, Donald J.

2011-01-01

Timely and accurate biodiversity analysis poses an ongoing challenge for the success of biomonitoring programs. Morphology-based identification of bioindicator taxa is time consuming, and rarely supports species-level resolution especially for immature life stages. Much work has been done in the past decade to develop alternative approaches for biodiversity analysis using DNA sequence-based approaches such as molecular phylogenetics and DNA barcoding. On-going assembly of DNA barcode reference libraries will provide the basis for a DNA-based identification system. The use of recently introduced next-generation sequencing (NGS) approaches in biodiversity science has the potential to further extend the application of DNA information for routine biomonitoring applications to an unprecedented scale. Here we demonstrate the feasibility of using 454 massively parallel pyrosequencing for species-level analysis of freshwater benthic macroinvertebrate taxa commonly used for biomonitoring. We designed our experiments in order to directly compare morphology-based, Sanger sequencing DNA barcoding, and next-generation environmental barcoding approaches. Our results show the ability of 454 pyrosequencing of mini-barcodes to accurately identify all species with more than 1% abundance in the pooled mixture. Although the approach failed to identify 6 rare species in the mixture, the presence of sequences from 9 species that were not represented by individuals in the mixture provides evidence that DNA based analysis may yet provide a valuable approach in finding rare species in bulk environmental samples. We further demonstrate the application of the environmental barcoding approach by comparing benthic macroinvertebrates from an urban region to those obtained from a conservation area. Although considerable effort will be required to robustly optimize NGS tools to identify species from bulk environmental samples, our results indicate the potential of an environmental barcoding approach for biomonitoring programs. PMID:21533287

Benthic Food Webs of the Chukchi and Beaufort Seas: Relative Importance of Ultimate Carbon Sources in a Changing Climate

NASA Astrophysics Data System (ADS)

Dunton, K. H.; Schonberg, S. V.; Mctigue, N.; Bucolo, P. A.; Connelly, T. L.; McClelland, J. W.

2014-12-01

Changes in sea-ice cover, coastal erosion, and freshwater run-off have the potential to greatly influence carbon assimilation pathways and affect trophic structure in benthic communities across the western Arctic. In the Chukchi Sea, variations in the duration and timing of ice cover affect the delivery of ice algae to a relatively shallow (40-50 m) shelf benthos. Although ice algae are known as an important spring carbon subsidy for marine benthic fauna, ice algal contributions may also help initiate productivity of an active microphytobenthos. Recent studies provide clear evidence that the microphytobenthos are photosynthetically active, and have sufficient light and nutrients for in situ growth. The assimilation of benthic diatoms from both sources may explain the 13C enrichment observed in benthic primary consumers throughout the northern Chukchi. On the eastern Beaufort Sea coast, shallow (2-4 m) estuarine lagoon systems receive massive subsidies of terrestrial carbon that is assimilated by a benthic fauna of significant importance to upper trophic level species, but again, distinct 13C enrichment in benthic primary consumers suggests the existence of an uncharacterized food source. Since ice algae are absent, we believe the 13C enrichment in benthic fauna is caused by the assimilation of benthic microalgae, as reflected in seasonally high benthic chlorophyll in spring under replete light and nutrient conditions. Our observations suggest that changes in ice cover, on both temporal and spatial scales, are likely to have significant effects on the magnitude and timing of organic matter delivery to both shelf and nearshore systems, and that locally produced organic matter may become an increasingly important carbon subsidy that affects trophic assimilation and secondary ecosystem productivity.

Paleolimnological records of nitrogen deposition in shallow, high-elevation lakes of Grand Teton National Park, Wyoming, USA

USGS Publications Warehouse

Spaulding, Sarah A.; Otu, Megan K.; Wolfe, Alexander P.; Baron, Jill S.

2015-01-01

Reactive nitrogen (Nr) from anthropogenic sources has been altering ecosystem function in lakes of the Rocky Mountains, other regions of western North America, and the Arctic over recent decades. The response of biota in shallow lakes to atmospheric deposition of Nr, however, has not been considered. Benthic algae are dominant in shallow, high-elevation lakes and are less sensitive to nutrient inputs than planktonic algae. Because the benthos is typically more nutrient rich than the water column, shallow lakes are not expected to show evidence of anthropogenic Nr. In this study, we assessed sedimentary evidence for regional Nr deposition, sediment chronology, and the nature of algal community response in five shallow, high-elevation lakes in Grand Teton National Park (GRTE). Over 140 diatom taxa were identified from the sediments, with a relatively high species richness of taxa characteristic of oligotrophic conditions. The diatom assemblages were dominated by benthic taxa, especially motile taxa. The GRTE lakes demonstrate assemblage-wide shifts in diatoms, including 1) synchronous and significant assemblage changes centered on ~1960 AD; 2) pre-1960 assemblages differed significantly from post-1960 assemblages; 3) pre-1960 diatom assemblages fluctuated randomly, whereas post- 1960 assemblages showed directional change; 4) changes in δ15N signatures were correlated with diatom community composition. These results demonstrate recent changes in shallow high18 elevation lakes that are most correlated with anthropogenic Nr. It is also possible, however, that the combined effect of Nr deposition and warming is accelerating species shifts in benthic diatoms. While uncertainties remain about the potential synergy of Nr deposition and warming, this study adds shallow lakes to the growing list of impacted high-elevation localities in western North America.

Preliminary evaluation of an in vivo fluorometer to quantify algal periphyton biomass and community composition

USGS Publications Warehouse

Harris, Theodore D.; Graham, Jennifer L.

2015-01-01

The bbe-Moldaenke BenthoTorch (BT) is an in vivo fluorometer designed to quantify algal biomass and community composition in benthic environments. The BT quantifies total algal biomass via chlorophyll a (Chl-a) concentration and may differentiate among cyanobacteria, green algae, and diatoms based on pigment fluorescence. To evaluate how BT measurements of periphytic algal biomass (as Chl-a) compared with an ethanol extraction laboratory analysis, we collected BT- and laboratory-measured Chl-a data from 6 stream sites in the Indian Creek basin, Johnson County, Kansas, during August and September 2012. BT-measured Chl-a concentrations were positively related to laboratory-measured concentrations (R2 = 0.47); sites with abundant filamentous algae had weaker relations (R2 = 0.27). Additionally, on a single sample date, we used the BT to determine periphyton biomass and community composition upstream and downstream from 2 wastewater treatment facilities (WWTF) that discharge into Indian Creek. We found that algal biomass increased immediately downstream from the WWTF discharge then slowly decreased as distance from the WWTF increased. Changes in periphyton community structure also occurred; however, there were discrepancies between BT- and laboratory-measured community composition data. Most notably, cyanobacteria were present at all sites based on BT measurements but were present at only one site based on laboratory-analyzed samples. Overall, we found that the BT compared reasonably well with laboratory methods for relative patterns in Chl-a but not as well with absolute Chl-aconcentrations. Future studies need to test the BT over a wider range of Chl-aconcentrations, in colored waters, and across various periphyton assemblages.

Herbivorous snails can increase water clarity by stimulating growth of benthic algae.

PubMed

Zhang, Xiufeng; Taylor, William D; Rudstam, Lars G

2017-11-01

Eutrophication in shallow lakes is characterized by a switch from benthic to pelagic dominance of primary productivity that leads to turbid water, while benthification is characterized by a shift in primary production from the pelagic zone to the benthos associated with clear water. A 12-week mesocosm experiment tested the hypothesis that the herbivorous snail Bellamya aeruginosa stimulates the growth of pelagic algae through grazing on benthic algae and through accelerating nutrient release from sediment. A tube-microcosm experiment using 32 P-PO 4 as a tracer tested the effects of the snails on the release of sediment phosphorus (P). The mesocosm experiment recorded greater total nitrogen (TN) concentrations and a higher ratio of TN:TP in the overlying water, and a higher light intensity and biomass of benthic algae as measured by chlorophyll a (Chl a) in the snail treatment than in the control. Concentrations of total phosphorus (TP), total suspended solids (TSSs), and inorganic suspended solids (ISSs) in the overlying water were lower in the snail treatment than in the control, though no significant difference in Chl a of pelagic algae between the snail treatment and control was observed. In the microcosm experiment, 32 P activity in the overlying water was higher in the snail treatment than in the control, indicating that snails accelerated P release from the sediment. Our interpretation of these results is that snails enhanced growth of benthic algae and thereby improved water clarity despite grazing on the benthic algae and enhancing P release from the sediment. The rehabilitation of native snail populations may therefore enhance the recovery of eutrophic shallow lakes to a clear water state by stimulating growth of benthic algae.

The Effect of Mangrove Leaf Litter Enrichment on Macrobenthic Colonization of Defaunated Sandy Substrates

NASA Astrophysics Data System (ADS)

Lee, S. Y.

1999-11-01

The importance of exported mangrove materials to nearshore macrobenthos has largely been predicted based upon decomposition and utilization studies conducted within the mangrove environment, and from quantitative measurements of export. The present study evaluated the impact of mangrove leaf litter enrichment on non-mangrove substrates in a high-salinity microcosm experiment. Fortnightly addition of Kandelia candel leaf detritus at levels equivalent to 0·66 and 0·33 mg cm -2day -1in defaunated sand in microcosms maintained under high salinity conditions and on a sandy substrate resulted in no significant differences from the control in total faunal dry biomass or ash-free dry weight (AFDW) after 28, 73, 137 and 217 days of experiment. Duration of experiment was significant in determining the biomass (both dry weight and AFDW) of the macrofaunal assemblage in the microcosms, but neither enrichment nor its interaction with time had an effect. Species richness, Shannon diversity and evenness, and the total number of individuals, however, decreased in the order control>low enrichment>high enrichment for almost all sampling dates. By contrast, soluble tannins in the microcosm sediment demonstrated the reverse pattern. Both duration of experiment and enrichment were significant in determining species richness and the total number of individuals. The interaction between time and enrichment level was significant in the former but not the latter case. Discriminant analysis performed on the species abundance data indicated distinct animal assemblages characteristic of the three enrichment levels. These findings suggest that mangrove organic matter may not necessarily result in enhancement effects on marine benthos but high concentrations of tannins may hamper colonization by the macrobenthos.

Microplastic contamination in benthic organisms from the Arctic and sub-Arctic regions.

PubMed

Fang, Chao; Zheng, Ronghui; Zhang, Yusheng; Hong, Fukun; Mu, Jingli; Chen, Mengyun; Song, Puqing; Lin, Longshan; Lin, Heshan; Le, Fengfeng; Bo, Jun

2018-06-14

The seafloor is recognized as one of the major sinks for microplastics (MPs). However, to date there have been no studies reported the MP contamination in benthic organisms from the Arctic and sub-Arctic regions. Therefore, this study provided the first data on the abundances and characteristics of MPs in a total of 413 dominant benthic organisms representing 11 different species inhabiting in the shelf of Bering and Chukchi Seas. The mean abundances of MP uptake by the benthos from all sites ranged from 0.02 to 0.46 items g -1 wet weight (ww) or 0.04-1.67 items individual -1 , which were lower values than those found in other regions worldwide. The highest value appeared at the northernmost site, implying that the sea ice and the cold current represent possible transport mediums. Interestingly, the predator A. rubens ingested the maximum quantities of MPs, suggesting that the trophic transfer of MPs through benthic food webs may play a critical role. Fibers constituted the major type (87%) in each species, followed by film (13%). The colors of fibers were classified as red (46%) and transparent (41%), and the film was all gray. The predominant composition was polyamide (PA) (46%), followed by polyethylene (PE) (23%), polyester (PET) (18%) and cellophane (CP) (13%). The most common sizes of MPs concentrated in the interval from 0.10 to 1.50 mm, and the mean size was 1.45 ± 0.13 mm. Further studies about the temporal trends and detrimental effects of MPs remain to be carried out in benthic organisms from the Arctic and sub-Arctic regions. Copyright © 2018 Elsevier Ltd. All rights reserved.

Interactive effects of temperature and habitat complexity on freshwater communities.

PubMed

Scrine, Jennifer; Jochum, Malte; Ólafsson, Jón S; O'Gorman, Eoin J

2017-11-01

Warming can lead to increased growth of plants or algae at the base of the food web, which may increase the overall complexity of habitat available for other organisms. Temperature and habitat complexity have both been shown to alter the structure and functioning of communities, but they may also have interactive effects, for example, if the shade provided by additional habitat negates the positive effect of temperature on understory plant or algal growth. This study explored the interactive effects of these two major environmental factors in a manipulative field experiment, by assessing changes in ecosystem functioning (primary production and decomposition) and community structure in the presence and absence of artificial plants along a natural stream temperature gradient of 5-18°C. There was no effect of temperature or habitat complexity on benthic primary production, but epiphytic production increased with temperature in the more complex habitat. Cellulose decomposition rate increased with temperature, but was unaffected by habitat complexity. Macroinvertebrate communities were less similar to each other as temperature increased, while habitat complexity only altered community composition in the coldest streams. There was also an overall increase in macroinvertebrate abundance, body mass, and biomass in the warmest streams, driven by increasing dominance of snails and blackfly larvae. Presence of habitat complexity, however, dampened the strength of this temperature effect on the abundance of macroinvertebrates in the benthos. The interactive effects that were observed suggest that habitat complexity can modify the effects of temperature on important ecosystem functions and community structure, which may alter energy flow through the food web. Given that warming is likely to increase habitat complexity, particularly at higher latitudes, more studies should investigate these two major environmental factors in combination to improve our ability to predict the impacts of future global change.

The Structure and Distribution of Benthic Communities on a Shallow Seamount (Cobb Seamount, Northeast Pacific Ocean)

PubMed Central

Curtis, Janelle M. R.; Clarke, M. Elizabeth

2016-01-01

Partially owing to their isolation and remote distribution, research on seamounts is still in its infancy, with few comprehensive datasets and empirical evidence supporting or refuting prevailing ecological paradigms. As anthropogenic activity in the high seas increases, so does the need for better understanding of seamount ecosystems and factors that influence the distribution of sensitive benthic communities. This study used quantitative community analyses to detail the structure, diversity, and distribution of benthic mega-epifauna communities on Cobb Seamount, a shallow seamount in the Northeast Pacific Ocean. Underwater vehicles were used to visually survey the benthos and seafloor in ~1600 images (~5 m2 in size) between 34 and 1154 m depth. The analyses of 74 taxa from 11 phyla resulted in the identification of nine communities. Each community was typified by taxa considered to provide biological structure and/or be a primary producer. The majority of the community-defining taxa were either cold-water corals, sponges, or algae. Communities were generally distributed as bands encircling the seamount, and depth was consistently shown to be the strongest environmental proxy of the community-structuring processes. The remaining variability in community structure was partially explained by substrate type, rugosity, and slope. The study used environmental metrics, derived from ship-based multibeam bathymetry, to model the distribution of communities on the seamount. This model was successfully applied to map the distribution of communities on a 220 km2 region of Cobb Seamount. The results of the study support the paradigms that seamounts are diversity 'hotspots', that the majority of seamount communities are at risk to disturbance from bottom fishing, and that seamounts are refugia for biota, while refuting the idea that seamounts have high endemism. PMID:27792782

Local environmental conditions determine the footprint of municipal effluent in coastal waters: a case study in the Strait of Georgia, British Columbia.

PubMed

Johannessen, Sophia C; Macdonald, Robie W; Burd, Brenda; van Roodselaar, Albert; Bertold, Stan

2015-03-01

To predict the likely effects of management action on any point source discharge into the coastal ocean, it is essential to understand both the composition of the effluent and the environmental conditions in the receiving waters. We illustrate a broadly-applicable approach to evaluating the comprehensive environmental footprint of a discharge, using regional geochemical budgets and nearfield monitoring. We take as a case study municipal effluent discharged into the Strait of Georgia (west coast of Canada), where there has been public controversy over the discharge of screened or primary-treated effluent directly into the ocean. Wastewater contributes ≤ 1% of the nitrogen, organic carbon and oxygen demand in the Strait and is unlikely to cause eutrophication, harmful algal blooms or hypoxia in this region. Metals (Hg, Pb, Cd) are controlled by natural cycles augmented by past mining and urbanization, with 0.3-5% of the flux contributed by wastewater. Wastewater contributes ~5% of PCBs but ≤ 60% of PBDEs and is likely also important for pharmaceuticals and personal care products. Effects of high organic flux on benthos are measurable in the immediate receiving environment. The availability of particle-active contaminants to enter the food chain depends on how long those contaminants remain in the sediment surface mixed layer before burial. Secondary treatment, slated for completion in Vancouver in 2030, will reduce fluxes of some contaminants, but will have negligible effect on regional budgets for organic carbon, nitrogen, oxygen, metals and PCBs. Removal of PBDEs from wastewater will affect regional budgets, depending on how the sludge is sequestered. Crown Copyright © 2014. Published by Elsevier B.V. All rights reserved.

Importance of benthic prey for fishes in coral reef-associated sediments

USGS Publications Warehouse

DeFelice, R.C.; Parrish, J.D.

2003-01-01

The importance of open, sandy substrate adjacent to coral reefs as habitat and a food source for fishes has been little studied in most shallow tropical waters in the Pacific, including Hawai'i. In this study, in Hanalei Bay, Hiwai'i, we identified and quantified the major invertebrate fauna (larger than 0.5 mm) in the well-characterized sands adjoining the shallow fringing reefs. Concurrently, we identified the fish species that seemed to make substantial use of these sand habitats, estimated their density there, sampled their gut contents to examine trophic links with the sand habitat, and made other observations and collections to determine the times, locations, and types of activity there. A variety of (mostly small) polychaeres were dominant in the sediments at most sampling stations, along with many small crustaceans (e.g., amphipods, isopods, ostracods, and small shrimps) and fair numbers of mollusks (especially bivalves) and small echinoids. Fish guts examined contained ???77% of the total number of benthic taxa collected, including nearly all those just listed. However, fish consumption was selective, and the larger shrimps, crabs, and small cryptic fishes were dominant in the diets of most of the numerous predator taxa. Diets of benthic-feeding fishes showed relatively low specific overlap. The fish fauna in this area included substrate-indifferent pelagics, species with various degrees of reef relatedness, reef-restricted species, and (at the other extreme) permanent cryptic sand dwellers. Data on occurrence and movements of fishes indicated that a band of sandy substrate several tens of meters wide next to the reef was an active area for fishes, and activity was considerably different at different times of day and for fish of different ages. These results imply an important trophic role for the benthos in these near-reef habitats in support of reef-associated fishes.

Accuracy in the estimation of quantitative minimal area from the diversity/area curve.

PubMed

Vives, Sergi; Salicrú, Miquel

2005-05-01

The problem of representativity is fundamental in ecological studies. A qualitative minimal area that gives a good representation of species pool [C.M. Bouderesque, Methodes d'etude qualitative et quantitative du benthos (en particulier du phytobenthos), Tethys 3(1) (1971) 79] can be discerned from a quantitative minimal area which reflects the structural complexity of community [F.X. Niell, Sobre la biologia de Ascophyllum nosodum (L.) Le Jolis en Galicia, Invest. Pesq. 43 (1979) 501]. This suggests that the populational diversity can be considered as the value of the horizontal asymptote corresponding to the curve sample diversity/biomass [F.X. Niell, Les applications de l'index de Shannon a l'etude de la vegetation interdidale, Soc. Phycol. Fr. Bull. 19 (1974) 238]. In this study we develop a expression to determine minimal areas and use it to obtain certain information about the community structure based on diversity/area curve graphs. This expression is based on the functional relationship between the expected value of the diversity and the sample size used to estimate it. In order to establish the quality of the estimation process, we obtained the confidence intervals as a particularization of the functional (h-phi)-entropies proposed in [M. Salicru, M.L. Menendez, D. Morales, L. Pardo, Asymptotic distribution of (h,phi)-entropies, Commun. Stat. (Theory Methods) 22 (7) (1993) 2015]. As an example used to demonstrate the possibilities of this method, and only for illustrative purposes, data about a study on the rocky intertidal seawed populations in the Ria of Vigo (N.W. Spain) are analyzed [F.X. Niell, Estudios sobre la estructura, dinamica y produccion del Fitobentos intermareal (Facies rocosa) de la Ria de Vigo. Ph.D. Mem. University of Barcelona, Barcelona, 1979].

beta-diversity and species accumulation in antarctic coastal benthos: influence of habitat, distance and productivity on ecological connectivity.

PubMed

Thrush, Simon F; Hewitt, Judi E; Cummings, Vonda J; Norkko, Alf; Chiantore, Mariachiara

2010-07-30

High Antarctic coastal marine environments are comparatively pristine with strong environmental gradients, which make them important places to investigate biodiversity relationships. Defining how different environmental features contribute to shifts in beta-diversity is especially important as these shifts reflect both spatio-temporal variations in species richness and the degree of ecological separation between local and regional species pools. We used complementary techniques (species accumulation models, multivariate variance partitioning and generalized linear models) to assess how the roles of productivity, bio-physical habitat heterogeneity and connectivity change with spatial scales from metres to 100's of km. Our results demonstrated that the relative importance of specific processes influencing species accumulation and beta-diversity changed with increasing spatial scale, and that patterns were never driven by only one factor. Bio-physical habitat heterogeneity had a strong influence on beta-diversity at scales <290 km, while the effects of productivity were low and significant only at scales >40 km. Our analysis supports the emphasis on the analysis of diversity relationships across multiple spatial scales and highlights the unequal connectivity of individual sites to the regional species pool. This has important implications for resilience to habitat loss and community homogenisation, especially for Antarctic benthic communities where rates of recovery from disturbance are slow, there is a high ratio of poor-dispersing and brooding species, and high biogenic habitat heterogeneity and spatio-temporal variability in primary production make the system vulnerable to disturbance. Consequently, large areas need to be included within marine protected areas for effective management and conservation of these special ecosystems in the face of increasing anthropogenic disturbance.

Abundance fluctuations among benthic invertebrates in two pacific estuaries

USGS Publications Warehouse

Nichols, Frederic H.

1985-01-01

Long-term studies were used to examine (1) contrasting time scales and mechanisms of structural variations within two benthic communities and (2) the usefulness of long data sets for evaluating human impact. A 10-year study of a San Francisco Bay mudflat, the details of which are reported elsewhere, has revealed large short-term (on the order of months) variations in species abundances within a community composed predominantly of opportunistic species. The study site, located in a highly urbanized estuary, is subject to the influence of a nearby sewage-treatment facility. However, rapid changes in population size of the common species, in part due to periodic natural habitat disturbance, impedes the detection of anthropogenic influences on community composition. Only a very long-term data set may provide evidence of progressive change. Data collected for a 20-year period on the benthic community at 200 m depth in the main basin of Puget Sound, an environment subject to little apparent habitat disturbance show that numerical abundance of the common species can also change markedly. Here, however, numerical dominance shifts from one species to another at irregular, multiyear intervals. Recent increases in two heretofore rare species, and a significant increase in total numbers of individuals suggest that long-term changes may be occurring in this community. These two long-term data sets demonstrate the importance of measuring both the amplitude and the periodicity of fluctuations in population size of aquatic species as well as long-term fluctuations and patterns in environmental factors before attempting to demonstrate the effect of anthropogenic influences on aquatic communities. The results of these studies also demonstrate the usefulness of long-term data sets for revealing the potential importance of interactions among species in determining abundance patterns in the soft-bottom benthos.

Food web functioning of the benthopelagic community in a deep-sea seamount based on diet and stable isotope analyses

NASA Astrophysics Data System (ADS)

Preciado, Izaskun; Cartes, Joan E.; Punzón, Antonio; Frutos, Inmaculada; López-López, Lucía; Serrano, Alberto

2017-03-01

Trophic interactions in the deep-sea fish community of the Galicia Bank seamount (NE Atlantic) were inferred by using stomach contents analyses (SCA) and stable isotope analyses (SIA) of 27 fish species and their main prey items. Samples were collected during three surveys performed in 2009, 2010 and 2011 between 625 and 1800 m depth. Three main trophic guilds were determined using SCA data: pelagic, benthopelagic and benthic feeders, respectively. Vertically migrating macrozooplankton and meso-bathypelagic shrimps were identified to play a key role as pelagic prey for the deep sea fish community of the Galicia Bank. Habitat overlap was hardly detected; as a matter of fact, when species coexisted most of them evidenced a low dietary overlap, indicating a high degree of resource partitioning. A high potential competition, however, was observed among benthopelagic feeders, i.e.: Etmopterus spinax, Hoplostethus mediterraneus and Epigonus telescopus. A significant correlation was found between δ15N and δ13C for all the analysed species. When calculating Trophic Levels (TLs) for the main fish species, using both the SCA and SIA approaches, some discrepancies arose: TLs calculated from SIA were significantly higher than those obtained from SCA, probably indicating a higher consumption of benthic-suprabenthic prey in the previous months. During the summer, food web functioning in the Galicia Bank was more influenced by the assemblages dwelling in the water column than by deep-sea benthos, which was rather scarce in the summer samples. These discrepancies demonstrate the importance of using both approaches, SCA (snapshot of diet) and SIA (assimilated food in previous months), when attempting trophic studies, if an overview of food web dynamics in different compartments of the ecosystem is to be obtained.

Ciliated protists from the nepheloid layer and water column of sites affected by the Deepwater Horizon oil spill in the Northeastern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Moss, Joseph A.; McCurry, Chelsea; Tominack, Sarah; Romero, Isabel C.; Hollander, David; Jeffrey, Wade H.; Snyder, Richard A.

2015-12-01

Benthic marine protists have been well documented from shallow marine benthic habitats but remain understudied in deeper habitats on continental shelves and slopes, particularly in the Northeastern Gulf of Mexico (NEGOM). This region was affected by a deep water oil well failure (BP-Deepwater Horizon, 2010). The combination of a lack of information on deep sea microbenthic communities and the potential for benthic microbial petroleum mineralization prompted this investigation. Water column and nepheloid layer samples were obtained via Niskin bottles and a multicorer respectively at stations across the NEGOM to: (1) determine whether nepheloid and water column communities are distinct and (2) assess benthic species richness relative to sediment PAH contamination. Phylum specific 18S rRNA gene amplification was used to construct clone libraries of ciliate assemblages. BLAST searches in the NCBI database indicated that a majority (~75%) of the clone sequences corresponded (94-100% similarity) with listed, yet unclassified sequences. Several putative species were common at most site locations and depths. Many known benthic ciliates, such as Uronychia transfuga, Uronychia setigera, and Spirotrachelostyla tani, were common in the nepheloid layer samples and not recovered in water column samples. Ciliated protist species richness increased with PAH levels found in surface sediments, suggesting a positive microbial response to petroleum enrichment of the benthos. The presence of previously unknown microbenthic communites in the nephaloid layer over oceanic clay-silt muds alters our view of microbial processes in the deep sea and merits investigation of the microbial processes and rates of microbial mineralization and biomass production important to global biogeochemistry.

High-Up: A Remote Reservoir of Microbial Extremophiles in Central Andean Wetlands.

PubMed

Albarracín, Virginia H; Kurth, Daniel; Ordoñez, Omar F; Belfiore, Carolina; Luccini, Eduardo; Salum, Graciela M; Piacentini, Ruben D; Farías, María E

2015-01-01

The Central Andes region displays unexplored ecosystems of shallow lakes and salt flats at mean altitudes of 3700 m. Being isolated and hostile, these so-called "High-Altitude Andean Lakes" (HAAL) are pristine and have been exposed to little human influence. HAAL proved to be a rich source of microbes showing interesting adaptations to life in extreme settings (poly-extremophiles) such as alkalinity, high concentrations of arsenic and dissolved salts, intense dryness, large daily ambient thermal amplitude, and extreme solar radiation levels. This work reviews HAAL microbiodiversity, taking into account different microbial niches, such as plankton, benthos, microbial mats and microbialites. The modern stromatolites and other microbialites discovered recently at HAAL are highlighted, as they provide unique modern-though quite imperfect-analogs of environments proxy for an earlier time in Earth's history (volcanic setting and profuse hydrothermal activity, low atmospheric O2 pressure, thin ozone layer and high UV exposure). Likewise, we stress the importance of HAAL microbes as model poly-extremophiles in the study of the molecular mechanisms underlying their resistance ability against UV and toxic or deleterious chemicals using genome mining and functional genomics. In future research directions, it will be necessary to exploit the full potential of HAAL poly-extremophiles in terms of their biotechnological applications. Current projects heading this way have yielded detailed molecular information and functional proof on novel extremoenzymes: i.e., DNA repair enzymes and arsenic efflux pumps for which medical and bioremediation applications, respectively, are envisaged. But still, much effort is required to unravel novel functions for this and other molecules that dwell in a unique biological treasure despite its being hidden high up, in the remote Andes.

High-Up: A Remote Reservoir of Microbial Extremophiles in Central Andean Wetlands

PubMed Central

Albarracín, Virginia H.; Kurth, Daniel; Ordoñez, Omar F.; Belfiore, Carolina; Luccini, Eduardo; Salum, Graciela M.; Piacentini, Ruben D.; Farías, María E.

2015-01-01

The Central Andes region displays unexplored ecosystems of shallow lakes and salt flats at mean altitudes of 3700 m. Being isolated and hostile, these so-called “High-Altitude Andean Lakes” (HAAL) are pristine and have been exposed to little human influence. HAAL proved to be a rich source of microbes showing interesting adaptations to life in extreme settings (poly-extremophiles) such as alkalinity, high concentrations of arsenic and dissolved salts, intense dryness, large daily ambient thermal amplitude, and extreme solar radiation levels. This work reviews HAAL microbiodiversity, taking into account different microbial niches, such as plankton, benthos, microbial mats and microbialites. The modern stromatolites and other microbialites discovered recently at HAAL are highlighted, as they provide unique modern—though quite imperfect—analogs of environments proxy for an earlier time in Earth's history (volcanic setting and profuse hydrothermal activity, low atmospheric O2 pressure, thin ozone layer and high UV exposure). Likewise, we stress the importance of HAAL microbes as model poly-extremophiles in the study of the molecular mechanisms underlying their resistance ability against UV and toxic or deleterious chemicals using genome mining and functional genomics. In future research directions, it will be necessary to exploit the full potential of HAAL poly-extremophiles in terms of their biotechnological applications. Current projects heading this way have yielded detailed molecular information and functional proof on novel extremoenzymes: i.e., DNA repair enzymes and arsenic efflux pumps for which medical and bioremediation applications, respectively, are envisaged. But still, much effort is required to unravel novel functions for this and other molecules that dwell in a unique biological treasure despite its being hidden high up, in the remote Andes. PMID:26733008

Changes in the deep-water benthos of eastern Lake Erie between 1979 and 1993

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dermott, R.; Kerec, D.

1995-06-01

In order to examine changes of the benthic community and benthic biomass as a result of mussel colonization, a survey of the deep-water benthic fauna in eastern Lake Erie was repeated in 1993 using the same sites and methods as in a 1979 survey. During 1979, the community beyond 30 m was dominated by oligochaete worms and the burrowing amphipod Diporeia, which represented 50 and 40% of the total benthic biomass respectively. By 1993, quagga mussels (Dreissena bugensis) formed over 90% of the benthic biomass. Mussels were present at all 13 sites. Densities of individuals >2 mm in length averagedmore » 3,241 mussels m{sup -2}. Of these mussels, 97% were quagga mussels. Total density of all sizes retained on a 180 {mu}m sieve averaged 34,800 mussels m{sup -2} but total biomass decreased from 1.58 to 0.98 g m{sup -2}. The density of the amphipod Diporeia was reduced from 1,844 in 1979 to 218 m{sup -2} in 1993. While present at all sites during 1979, Diporeia remained common only at two sites and were absent at 8 of the 13 sites in 1993. The native fingernail clams, Pisidium spp., were reduced from 327 to 82 m{sup -2}. No significant reduction occurred in the worm and chironomid populations, however the dry biomass of the chironomids was reduced from 0.07 to 0.0008 g m{sup -2}. These reductions may be due to competition with the mussels for freshly settling algae. The meiofauna, which included small nematodes, ostracods, and harpacticoids retained on a 180 {mu}m sieve, all increased in density. Perhaps they benefited from an increase in the detritus deposited as pseudofeces around the mussels.« less

The use of biotopes in assessing the environmental quality of tidal estuaries in Europe

NASA Astrophysics Data System (ADS)

Ducrotoy, Jean-Paul

2010-02-01

In Europe, the Water Framework Directive (WFD) (European Commission 2000) - and the recently proposed EU Marine Strategy Directive - have established a framework for the protection of groundwater, inland surface waters, estuarine (transitional) waters and coastal waters. TheWFD has several objectives: to prevent water ecosystem deterioration, to protect and to enhance the status of water resources but the most important aspect is to achieve a 'Good Ecological Status' (GES) for all waters, by 2015. In essence, the WFD requires a water body to be compared against a reference condition and then its ecological status designated - if the water body does not meet good or high ecological status, i.e. it is in moderate, poor or bad ecological status, then remedial measures have to be taken (e.g. pollution has to be removed). Many indices were developed from benthic work and are often thought fit for purpose. Based on the successional model proposed by Pearson and Rosenberg (1978), most of these indices were effectively established for soft sediment benthos. However, those developed in the framework of the WFD were derived from work on the subtidal. They are difficult to use in the intertidal and in transitional waters. As they were derived from work on organic pollution, there is no or little evident link with chemical and physical pollution. Ecomorphology brings together a biological approach and a sedimentological approach to estuarine ecology. It considers the use of the biotope and related concepts (biocenosis, bio-facies, ecotone, habitat…) as a basis to a novel approach to environmental quality assessment. It addresses the problem of the estuarine quality paradox in recognising the role of nutrients and organic matter in biogeochemical cycles. The discussion shows the complementarity of biotopes with the Sato-Umi and the ecohydrolgy approaches.

Silurian trace fossils in carbonate turbidites from the Alexander Arc of southeastern Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Soja, C.M.

Early to Late Silurian (Wenlock-Ludlow) body and trace fossils from the Heceta Formation are preserved in the oldest widespread carbonates in the Alexander terrane of southeastern Alaska. They represent the earliest shelly benthos to inhabit a diversity of marine environments and are important indicators of the early stages in benthic community development within this ancient island arc. The trace fossils are significant because they add to a small but growing body of knowledge about ichnofaunas in deep-water Paleozoic carbonates. Proximal to medial carbonate turbidites yield a low-diversity suite of trace fossils that comprises five distinct types of biogenic structures. Beddingmore » planes reveal simple epichnial burrows (Planolites), cross-cutting burrows (Fucusopsis), and tiny cylindrical burrows. These and other casts, including chondrites( )-like burrow clusters, represent the feeding activities (fodinichnia) of preturbidite animals. Hypichnial burrows and rare endichnial traces reflect the activities of postturbidite animals. Broken and offset traces indicate that infaunal biota commenced burrowing before slumping and subsequent soft-sediment deformation. The abundance and density of trace fossils increases offshore in the medial turbidites associated with a decrease in the size and amount of coarse particles and with an increase in mud and preserved organic material. Although diversity levels are similar in the proximal and medial turbidite facies, they are much lower than in Paleozoic siliciclastic turbidites. This may reflect unfavorable environmental conditions for infaunal biota or paleobiogeographic isolation of the Alexander terrane during the Silurian. A greater use of trace fossils in terrane analysis will help to resolve this issue and should provide new data for reconstructing the paleogeography of circum-Pacific terranes.« less

Integrated assessment of contaminated sediments in the lower Fox River and Green Bay, Wisconsin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ankley, G.T.; Lodge, K.; Call, D.J.

Samples of sediment and biota were collected from sites in the lower Fox River and southern Green Bay to determine existing or potential impacts of sediment-associated contaminants on different ecosystem components of this Great Lakes area of concern. Evaluation of benthos revealed a relatively depauperate community, particularly at the lower Fox River sites. Sediment pore water and bulk sediments from several lower Fox River sites were toxic to a number of test species including Pimephales promelas, Ceriodaphnia dubia, Hexagenia limbata, Selenastrum capricornutum, and Photobacterium phosphorum. An important component of the observed toxicity appeared to be due to ammonia. Evaluation ofmore » three bullhead (Ictalurus) species from the lower Fox River revealed an absence of preneoplastic or neoplastic liver lesions, and the Salmonella typhimurium bioassay indicated relatively little mutagenicity in sediment extracts. Apparent adverse reproductive effects were noted in two species of birds nesting along the lower Fox River and on a confined disposal facility for sediments near the mouth of the river, and there were measurable concentrations of potentially toxic 2,3,7,8-substituted polychlorinated dibenzo-p-dioxins (PCDDs) and dibenzofurans (PCDFs), and planar polychlorinated biphenyls (PCBs) both in the birds and in sediments from several of the study sites. Based on toxic equivalency factors and the results of an in vitro bioassay with H4IIE rat hepatoma cells, it appeared that the majority of potential toxicity of the PCB/PCDF/PCDD mixture in biota from the lower Fox River/Green Bay system was due to the planar PCBs. The results of these studies are discussed in terms of an integrated assessment focused on providing data for remedial action planning.« less

Global reductions in seafloor biomass in response to climate change.

PubMed

Jones, Daniel O B; Yool, Andrew; Wei, Chih-Lin; Henson, Stephanie A; Ruhl, Henry A; Watson, Reg A; Gehlen, Marion

2014-06-01

Seafloor organisms are vital for healthy marine ecosystems, contributing to elemental cycling, benthic remineralization, and ultimately sequestration of carbon. Deep-sea life is primarily reliant on the export flux of particulate organic carbon from the surface ocean for food, but most ocean biogeochemistry models predict global decreases in export flux resulting from 21st century anthropogenically induced warming. Here we show that decadal-to-century scale changes in carbon export associated with climate change lead to an estimated 5.2% decrease in future (2091-2100) global open ocean benthic biomass under RCP8.5 (reduction of 5.2 Mt C) compared with contemporary conditions (2006-2015). Our projections use multi-model mean export flux estimates from eight fully coupled earth system models, which contributed to the Coupled Model Intercomparison Project Phase 5, that have been forced by high and low representative concentration pathways (RCP8.5 and 4.5, respectively). These export flux estimates are used in conjunction with published empirical relationships to predict changes in benthic biomass. The polar oceans and some upwelling areas may experience increases in benthic biomass, but most other regions show decreases, with up to 38% reductions in parts of the northeast Atlantic. Our analysis projects a future ocean with smaller sized infaunal benthos, potentially reducing energy transfer rates though benthic multicellular food webs. More than 80% of potential deep-water biodiversity hotspots known around the world, including canyons, seamounts, and cold-water coral reefs, are projected to experience negative changes in biomass. These major reductions in biomass may lead to widespread change in benthic ecosystems and the functions and services they provide. © 2013 The Authors Global Change Biology Published by John Wiley & Sons Ltd.

Stable-isotope analysis of canvasback winter diet in upper Chesapeake Bay

USGS Publications Warehouse

Haramis, G.M.; Jorde, Dennis G.; Macko, S.A.; Walker, J.L.

2001-01-01

A major decline in submerged aquatic vegetation (SAV) in Chesapeake Bay has altered the diet of wintering Canvasbacks (Aythya valisineria) from historically plant to a combination of benthic animal foods, especially the ubiquitous Baltic clam (Macoma balthica), supplemented with anthropogenic corn (Zea mays). Because the isotopic signature of corn is readily discriminated from bay benthos, but not SAV, we used stable-isotope methodology to investigate the corn–SAV component of the winter diet of Canvasbacks. Feeding trials with penned Canvasbacks were conducted to establish turnover rates and fractionation end-point loci of δ13C and δ15N signatures of whole blood for individual ducks fed ad libitum diets of (1) Baltic clams, (2) Baltic clams and corn, and (3) tubers of wild celery (Vallisneria americana). Turnover time constants averaged 4.5 weeks, indicating that signatures of wild ducks would be representative of bay diets by late February. Isotopic signatures of wild Canvasbacks sampled in February fell on a continuum between end-point loci for the Baltic clam and the combination Baltic clam and corn diet. Although that finding verifies a clear dependence on corn–SAV for wintering Canvasbacks, it also reveals that not enough corn–SAV is available to establish ad libitum consumption for the 15,000+ Canvasbacks wintering in the upper bay. On the basis of mean δ13C signature of bay Canvasbacks (n = 59) and ingestion rates from feeding trials, we estimated that 258 kg corn per day would account for the observed δ13C enrichment and supply 18% of daily energetic needs for 15,000 Canvasbacks. That level of corn availability is so realistic that we conclude that SAV is likely of little dietary importance to Canvasbacks in that portion of the bay.

The infauna of three widely distributed sponge species (Hexactinellida and Demospongiae) from the deep Ekström Shelf in the Weddell Sea, Antarctica

NASA Astrophysics Data System (ADS)

Kersken, Daniel; Göcke, Christian; Brandt, Angelika; Lejzerowicz, Franck; Schwabe, Enrico; Anna Seefeldt, Meike; Veit-Köhler, Gritta; Janussen, Dorte

2014-10-01

Due to their high abundance and large body size sponges have a central position in Antarctic zoobenthos, where they form the most extensive sponge grounds of the world. Though research on Antarctic benthos communities is quite established, research on sponge-associated infauna communities is scarce. We analyzed associated infauna of fifteen individuals of the sponge species Mycale (Oxymycale) acerata Kirkpatrick, 1907 (Demospongiae: Mycalina), Rossella antarctica Carter, 1872 and R. racovitzae Topsent, 1901 (both Hexactinellida: Lyssacinosida). Samples were collected from the deep Ekström Shelf at 602 m in the South-Eastern Weddell Sea, Antarctica, during the ANT XXIV-2 (SYSTCO I) expedition of RV Polarstern. The number of species, α- and β-diversity and the significantly different species composition of infauna communities related to sponge species were calculated, the latter via cluster analysis. The sponge-associated infauna consisted of five phyla: Foraminifera, Nematoda, Polychaeta, Mollusca and Arthropoda. In total 11,463 infaunal specimens were extracted and we found at least 76 associated species. Highest values of α-diversity were calculated for a sample of R. antarctica with a Shannon-Index of 1.84 and Simpson-Index of 0.72 respectively. Our results of the cluster-analysis show significant differences between infauna communities and a unique species composition for single sponge species. Polychaetes of the genus Syllis Lamarck, 1818 were numerous in M. acerata and genera like Pionosyllis Malmgren, 1867 and Cirratulus Lamarck, 1801 were numerous in R. antarctica. Individuals of the amphipod species Seba cf. dubia Schellenberg, 1926 were often found in R. antarctica and R. racovitzae while Colomastix fissilingua Schellenberg, 1926 was frequent in samples of M. acerata. Molluscs were present in M. acerata and R. antarctica but absent in R. racovitzae.

Declining populations of the fingernail clam Musculium transversum in the upper Mississippi River

USGS Publications Warehouse

Wilson, D.M.; Naimo, T.J.; Weiner, J.G.; Anderson, R.V.; Sandheinrich, M.B.; Sparks, Richard E.

1995-01-01

We examined recent temporal trends in the abundance of fingernail clams Musculium transversum (formerly Sphaerium transversum) in the upper Mississippi River. Historical data on densities of fingernail clams were obtained from regional scientists and published literature. We also sampled benthos in six navigation pools in summer 1991, finding very few fingernail clams. The combined data set, including historical data and sampling results, extended from 1973 to 1992 and was sufficient to statistically evaluate trends in densities of fingernail clams in eight pools. Populations of fingernail clams declined significantly in five of the eight pools examined (Pools 2, 5, 7, 9, and 19), which spanned a 700-km reach of river from St. Paul, Minnesota, to Keokuk, Iowa. Densities in Pool 19, which had the longest historical record on fingernail clam abundance, averaged 30 000 m super(-2) in 1985 and progressively declined to zero in 1990. Combined data from all eight pools showed a significant decline in abundance of fingernail clams. An evaluation of potential causal factors led us to hypothesize that the population declines in Pools 2 to 9 were linked to point-source pollution rather than to dredging activity or commercial navigation traffic. In Pool 19, the declines of fingernail clams may have resulted from low-flow conditions during drought periods, but the causal mechanisms by which low flow influences fingernail clam abundance are unclear. The decrease in fingernail clam populations may adversely affect certain fish and wildlife, such as migrating lesser scaup Aythya affinis, which feed heavily on the small mollusk. Moreover, the decreases in populations of this pollution-sensitive mollusk may signal a large-scale deterioration in the health of this riverine ecosystem.

Benthic nutrient sources to hypereutrophic upper Klamath Lake, Oregon, USA.

PubMed

Kuwabara, James S; Topping, Brent R; Lynch, Dennis D; Carter, James L; Essaid, Hedeff I

2009-03-01

Three collecting trips were coordinated in April, May, and August 2006 to sample the water column and benthos of hypereutrophic Upper Klamath Lake (OR, USA) through the annual cyanophyte bloom of Aphanizomenon flos-aquae. A pore-water profiler was designed and fabricated to obtain the first high-resolution (centimeter-scale) estimates of the vertical concentration gradients of macro- and micronutrients for diffusive-flux determinations. A consistently positive benthic flux for soluble reactive phosphorus (SRP) was observed with solute release from the sediment, ranging between 0.4 and 6.1 mg/m(2)/d. The mass flux over an approximate 200-km(2) lake area was comparable in magnitude to riverine inputs. An additional concern related to fish toxicity was identified when dissolved ammonium also displayed consistently positive benthic fluxes of 4 to 134 mg/m(2)/d, again comparable to riverine inputs. Although phosphorus was a logical initial choice by water quality managers for the limiting nutrient when nitrogen-fixing cyanophytes dominate, initial trace-element results from the lake and major inflowing tributaries suggested that the role of iron limitation on primary productivity should be investigated. Dissolved iron became depleted in the lake water column during the course of the algal bloom, while dissolved ammonium and SRP increased. Elevated macroinvertebrate densities, at least of the order of 10(4) individuals/m(2), suggested that the diffusive-flux estimates may be significantly enhanced by bioturbation. In addition, heat-flux modeling indicated that groundwater advection of nutrients could also significantly contribute to internal nutrient loading. Accurate environmental assessments of lentic systems and reasonable expectations for point-source management require quantitative consideration of internal solute sources.

Biological effects of anthropogenic contaminants in the San Francisco Estuary

USGS Publications Warehouse

Thompson, B.; Adelsbach, T.; Brown, C.; Hunt, J.; Kuwabara, J.; Neale, J.; Ohlendorf, H.; Schwarzbach, S.; Spies, R.; Taberski, K.

2007-01-01

Concentrations of many anthropogenic contaminants in the San Francisco Estuary exist at levels that have been associated with biological effects elsewhere, so there is a potential for them to cause biological effects in the Estuary. The purpose of this paper is to summarize information about biological effects on the Estuary's plankton, benthos, fish, birds, and mammals, gathered since the early 1990s, focusing on key accomplishments. These studies have been conducted at all levels of biological organization (sub-cellular through communities), but have included only a small fraction of the organisms and contaminants of concern in the region. The studies summarized provide a body of evidence that some contaminants are causing biological impacts in some biological resources in the Estuary. However, no general patterns of effects were apparent in space and time, and no single contaminant was consistently related to effects among the biota considered. These conclusions reflect the difficulty in demonstrating biological effects due specifically to contamination because there is a wide range of sensitivity to contaminants among the Estuary's many organisms. Additionally, the spatial and temporal distribution of contamination in the Estuary is highly variable, and levels of contamination covary with other environmental factors, such as freshwater inflow or sediment-type. Federal and State regulatory agencies desire to develop biological criteria to protect the Estuary's biological resources. Future studies of biological effects in San Francisco Estuary should focus on the development of meaningful indicators of biological effects, and on key organism and contaminants of concern in long-term, multifaceted studies that include laboratory and field experiments to determine cause and effect to adequately inform management and regulatory decisions. ?? 2006 Elsevier Inc. All rights reserved.

Terrestrial-marine teleconnections in the Devonian: links between the evolution of land plants, weathering processes, and marine anoxic events

PubMed Central

Algeo, T. J.

1998-01-01

The Devonian Period was characterized by major changes in both the terrestrial biosphere, e.g. the evolution of trees and seed plants and the appearance of multi-storied forests, and in the marine biosphere, e.g. an extended biotic crisis that decimated tropical marine benthos, especially the stromatoporoid-tabulate coral reef community. Teleconnections between these terrestrial and marine events are poorly understood, but a key may lie in the role of soils as a geochemical interface between the lithosphere and atmosphere/hydrosphere, and the role of land plants in mediating weathering processes at this interface. The effectiveness of terrestrial floras in weathering was significantly enhanced as a consequence of increases in the size and geographic extent of vascular land plants during the Devonian. In this regard, the most important palaeobotanical innovations were (1) arborescence (tree stature), which increased maximum depths of root penetration and rhizoturbation, and (2) the seed habit, which freed land plants from reproductive dependence on moist lowland habitats and allowed colonization of drier upland and primary successional areas. These developments resulted in a transient intensification of pedogenesis (soil formation) and to large increases in the thickness and areal extent of soils. Enhanced chemical weathering may have led to increased riverine nutrient fluxes that promoted development of eutrophic conditions in epicontinental seaways, resulting in algal blooms, widespread bottomwater anoxia, and high sedimentary organic carbon fluxes. Long-term effects included drawdown of atmospheric pCO2 and global cooling, leading to a brief Late Devonian glaciation, which set the stage for icehouse conditions during the Permo-Carboniferous. This model provides a framework for understanding links between early land plant evolution and coeval marine anoxic and biotic events, but further testing of Devonian terrestrial-marine teleconnections is needed.

Indirect effects of overfishing on Caribbean reefs: sponges overgrow reef-building corals

PubMed Central

Loh, Tse-Lynn; McMurray, Steven E.; Henkel, Timothy P.; Vicente, Jan

2015-01-01

Consumer-mediated indirect effects at the community level are difficult to demonstrate empirically. Here, we show an explicit indirect effect of overfishing on competition between sponges and reef-building corals from surveys of 69 sites across the Caribbean. Leveraging the large-scale, long-term removal of sponge predators, we selected overfished sites where intensive methods, primarily fish-trapping, have been employed for decades or more, and compared them to sites in remote or marine protected areas (MPAs) with variable levels of enforcement. Sponge-eating fishes (angelfishes and parrotfishes) were counted at each site, and the benthos surveyed, with coral colonies scored for interaction with sponges. Overfished sites had >3 fold more overgrowth of corals by sponges, and mean coral contact with sponges was 25.6%, compared with 12.0% at less-fished sites. Greater contact with corals by sponges at overfished sites was mostly by sponge species palatable to sponge predators. Palatable species have faster rates of growth or reproduction than defended sponge species, which instead make metabolically expensive chemical defenses. These results validate the top-down conceptual model of sponge community ecology for Caribbean reefs, as well as provide an unambiguous justification for MPAs to protect threatened reef-building corals. An unanticipated outcome of the benthic survey component of this study was that overfished sites had lower mean macroalgal cover (23.1% vs. 38.1% for less-fished sites), a result that is contrary to prevailing assumptions about seaweed control by herbivorous fishes. Because we did not quantify herbivores for this study, we interpret this result with caution, but suggest that additional large-scale studies comparing intensively overfished and MPA sites are warranted to examine the relative impacts of herbivorous fishes and urchins on Caribbean reefs. PMID:25945305

Decadal reanalysis of biogeochemical indicators and fluxes in the North West European shelf-sea ecosystem

NASA Astrophysics Data System (ADS)

Ciavatta, S.; Kay, S.; Saux-Picart, S.; Butenschön, M.; Allen, J. I.

2016-03-01

This paper presents the first decadal reanalysis simulation of the biogeochemistry of the North West European shelf, along with a full evaluation of its skill, confidence, and value. An error-characterized satellite product for chlorophyll was assimilated into a physical-biogeochemical model of the North East Atlantic, applying a localized Ensemble Kalman filter. The results showed that the reanalysis improved the model simulation of assimilated chlorophyll in 60% of the study region. Model validation metrics showed that the reanalysis had skill in matching a large data set of in situ observations for 10 ecosystem variables. Spearman rank correlations were significant and higher than 0.7 for physical-chemical variables (temperature, salinity, and oxygen), ˜0.6 for chlorophyll and nutrients (phosphate, nitrate, and silicate), and significant, though lower in value, for partial pressure of dissolved carbon dioxide (˜0.4). The reanalysis captured the magnitude of pH and ammonia observations, but not their variability. The value of the reanalysis for assessing environmental status and variability has been exemplified in two case studies. The first shows that between 325,000 and 365,000 km2 of shelf bottom waters were vulnerable to oxygen deficiency potentially threatening bottom fishes and benthos. The second application confirmed that the shelf is a net sink of atmospheric carbon dioxide, but the total amount of uptake varies between 36 and 46 Tg C yr-1 at a 90% confidence level. These results indicate that the reanalysis output data set can inform the management of the North West European shelf ecosystem, in relation to eutrophication, fishery, and variability of the carbon cycle.

The seasonal use of small-scale space by benthic species in a transiently hypoxic area

NASA Astrophysics Data System (ADS)

Doya, Carolina; Aguzzi, Jacopo; Chatzievangelou, Damianos; Costa, Corrado; Company, Joan Baptista; Tunnicliffe, Verena

2016-02-01

The use of small-scale space by benthos and its variation over the seasons in transiently hypoxic zones is poorly known. In this study, we examined the reciprocal spatial dispersion of the squat lobster (Munida quadrispina) and the slender sole (Lyopsetta exilis) according to oxygen concentrations at a VENUS platform of Ocean Networks Canada (ONC). This platform is located in a seasonally hypoxic zone at 96 m depth in the fjord of Saanich Inlet (British Columbia, Canada). We counted and located small as well as large squat lobsters and slender soles in digital still images during 1 year (2012-2013) also concomitantly obtained oxygen data. Images were subdivided in a squared grid to obtain relative density maps as a proxy for surface occupation and spatial autocorrelation. Pearson's chi-squared tests at a yearly scale, along with Dixon's spatial segregation index (S) for each possible pair among the studied groups, showed a significant absence of overlap. The same analyses by month and cross-correlation between oxygen and S showed that while the dispersion patterns of the large squat lobsters seemed to be driven mainly by the morphology of the seafloor, an effect of hypoxia was found in the small squat lobsters and the slender soles levels of aggregation. Small squat lobster sought seabed protrusions, such as sponges, to reach more oxygenated water. The slender sole's space occupation decreased significantly, being forced to retreat when the squat lobsters' abundance peaked as a result of what appeared to be a seasonal reproduction event in early summer. Our results contribute to the understanding of the ways in which oxygen levels modulate substrate use by benthic species in the framework of a global expansion of hypoxia in coastal and ocean areas.

Is long-term ecological functioning stable: The case of the marine benthos?

NASA Astrophysics Data System (ADS)

Frid, C. L. J.; Caswell, B. A.

2015-04-01

It is widely acknowledged that human activities are contributing to substantial biodiversity loss and that this threatens ecological processes underpinning human exploitation of 'ecosystem services' (defined by the Millennium Ecosystem Assessment as 'the benefits people obtain from ecosystems'). In the present study we consider three 'intermediate ecosystem services' in both contemporary and ancient marine systems and although 'ecosystem services' per se did not exist in the Jurassic our study seeks to consider the future provision of these services and so the term is retained. We consider the temporal patterns in benthic marine ecosystems: (1) spanning four decades at two offshore stations in the North Sea, UK and (2) over millennial scales in Late Jurassic UK palaeocommunities. Biological traits analysis is used to link changes in taxonomic composition to variations in ecological functioning and the potential supply of three 'intermediate' ecosystem services: the ability to provide food to fish and other predators, benthic nutrient regeneration and carbon cycling. We examine whether changes in taxonomic composition drive temporal variation in functioning, whether this variation increases over time and the extent to which species turnover is comparable in contemporary and ancient systems. Taxonomic variability was of a similar magnitude in all three systems and there was evidence for changes in functioning linked to changes in several (key or rivet) taxa. During other periods resilience maintained functioning in the face of taxonomic change. These results suggest that in these benthic systems the Biodiversity-Ecosystem Functioning relationship is idiosyncratic, but a degree of temporal stability in functioning is maintained such that the ecosystem services they underpin would also be stable during decadal and longer-term changes.

Evidence of hypoxic foraging forays by yellow perch (Perca flavescens) and potential consequences for prey consumption

USGS Publications Warehouse

Roberts, James J.; Grecay, Paul A.; Ludsin, Stuart A.; Pothoven, Steve A.; Vanderploeg, Henry A.; Höök, Tomas O.

2012-01-01

Previous studies in a variety of ecosystems have shown that ecologically and economically important benthic and bentho-pelagic fishes avoid hypoxic (−1) habitats by moving vertically or horizontally to more oxygenated areas. While avoidance of hypoxic conditions generally leads to a complete shift away from preferred benthic prey, some individual fish continue to consume benthic prey items in spite of bottom hypoxia, suggesting complex habitat utilisation and foraging patterns. For example, Lake Erie yellow perch (Perca flavescens) continue to consume benthic prey, despite being displaced vertically and horizontally by hypolimnetic hypoxia. We hypothesised that hypolimnetic hypoxia can negatively affect yellow perch by altering their distribution and inducing energetically expensive foraging behaviour. To test this hypothesis, we used drifting hydroacoustics and trawl sampling to quantify water column distribution, sub-daily vertical movement and foraging behaviour of yellow perch within hypoxic and normoxic habitats of Lake Erie’s central basin during August-September 2007. We also investigated the effects of rapid changes in ambient oxygen conditions on yellow perch consumption potential by exposing yellow perch to various static and fluctuating oxygen conditions in a controlled laboratory experiment. Our results indicate that, while yellow perch in general avoid hypoxic conditions, some individuals undertake foraging forays into hypoxic habitats where they experience greater fluctuations in abiotic conditions (pressure, temperature and oxygen concentration) than at normoxic sites. However, laboratory results suggest short-term exposure to low oxygen conditions did not negatively impact consumption potential of yellow perch. Detailed understanding of sub-daily individual behaviours may be crucial for determining interactive individual- and ecosystem-level effects of stressors such as hypoxia.

Long-Term Observations of Epibenthic Fish Zonation in the Deep Northern Gulf of Mexico

PubMed Central

Wei, Chih-Lin; Rowe, Gilbert T.; Haedrich, Richard L.; Boland, Gregory S.

2012-01-01

A total of 172 bottom trawl/skimmer samples (183 to 3655-m depth) from three deep-sea studies, R/V Alaminos cruises (1964–1973), Northern Gulf of Mexico Continental Slope (NGoMCS) study (1983–1985) and Deep Gulf of Mexico Benthos (DGoMB) program (2000 to 2002), were compiled to examine temporal and large-scale changes in epibenthic fish species composition. Based on percent species shared among samples, faunal groups (≥10% species shared) consistently reoccurred over time on the shelf-break (ca. 200 m), upper-slope (ca. 300 to 500 m) and upper-to-mid slope (ca. 500 to 1500 m) depths. These similar depth groups also merged when the three studies were pooled together, suggesting that there has been no large-scale temporal change in depth zonation on the upper section of the continental margin. Permutational multivariate analysis of variance (PERMANOVA) also detected no significant species changes on the limited sites and areas that have been revisited across the studies (P>0.05). Based on the ordination of the species shared among samples, species replacement was a continuum along a depth or macrobenthos biomass gradient. Despite the well-known, close, negative relationship between water depth and macrofaunal biomass, the fish species changed more rapidly at depth shallower than 1,000 m, but the rate of change was surprisingly slow at the highest macrofaunal biomass (>100 mg C m−2), suggesting that the composition of epibenthic fishes was not altered in response to the extremely high macrofaunal biomass in the upper Mississippi and De Soto Submarine Canyons. An alternative is that the pattern of fish species turnover is related to the decline in macrofaunal biomass, the presumptive prey of the fish, along the depth gradient. PMID:23056412

Long-term observations of epibenthic fish zonation in the deep northern Gulf of Mexico.

PubMed

Wei, Chih-Lin; Rowe, Gilbert T; Haedrich, Richard L; Boland, Gregory S

2012-01-01

A total of 172 bottom trawl/skimmer samples (183 to 3655-m depth) from three deep-sea studies, R/V Alaminos cruises (1964-1973), Northern Gulf of Mexico Continental Slope (NGoMCS) study (1983-1985) and Deep Gulf of Mexico Benthos (DGoMB) program (2000 to 2002), were compiled to examine temporal and large-scale changes in epibenthic fish species composition. Based on percent species shared among samples, faunal groups (≥10% species shared) consistently reoccurred over time on the shelf-break (ca. 200 m), upper-slope (ca. 300 to 500 m) and upper-to-mid slope (ca. 500 to 1500 m) depths. These similar depth groups also merged when the three studies were pooled together, suggesting that there has been no large-scale temporal change in depth zonation on the upper section of the continental margin. Permutational multivariate analysis of variance (PERMANOVA) also detected no significant species changes on the limited sites and areas that have been revisited across the studies (P>0.05). Based on the ordination of the species shared among samples, species replacement was a continuum along a depth or macrobenthos biomass gradient. Despite the well-known, close, negative relationship between water depth and macrofaunal biomass, the fish species changed more rapidly at depth shallower than 1,000 m, but the rate of change was surprisingly slow at the highest macrofaunal biomass (>100 mg C m(-2)), suggesting that the composition of epibenthic fishes was not altered in response to the extremely high macrofaunal biomass in the upper Mississippi and De Soto Submarine Canyons. An alternative is that the pattern of fish species turnover is related to the decline in macrofaunal biomass, the presumptive prey of the fish, along the depth gradient.

Homarine as a feeding deterrent in common shallow-water antarctic lamellarian gastropodMarseniopsis mollis: A rare example of chemical defense in a marine prosobranch.

PubMed

McClintock, J B; Baker, B J; Hamann, M T; Yoshida, W; Slattery, M; Heine, J N; Bryan, P J; Jayatilake, G S; Moon, B H

1994-10-01

The common bright yellow antarctic lamellarian gastropodMarseniopsis mollis was examined for the presence of defensive chemistry. Proton nuclear magnetic resonance (NMR) spectroscopy indicated that a major component of ethanolic extracts purified by reversed-phase column chromatography was homarine. Further high-performance liquid chromatography (HPLC) analysis of the mantle, foot, and viscera verified the presence of homarine in all body tissues at concentrations ranging from 6 to 24 mg/g dry tissue. A conspicuous macroinvertebrate predator of the shallow antarctic benthos, the sea starOdontaster validus, always rejected live individuals ofM. mollis, while readily feeding on pieces of fish tail muscle. Filter paper disks treated with shrimp elicited a broad range of feeding behaviors in the sea starO. validus (movement of disc to mouth, extrusion of cardiac stomach, humped feeding posture). Shrimp disks treated with homarine (0.4 and 4 mg/disk) were rejected byO. validus significantly more frequently than control disks treated with solvent carrier and shrimp or shrimp alone. The highest concentration of homarine tested not only caused feeding deterrence, but in several sea stars a flight response was noted. Homarine was not detected in the tunic of the antarctic ascidianCnemidocarpa verrucosa, a presumed primary prey ofM. mollis. Nonetheless, crude extracts of the epizooites that foul the tunic (primarily the bryozoans and hydroids) contain homarine, suggestingM. mollis may ingest and derive its chemistry from these organisms. This appears to be only the third example of chemical defense in a member of the Order Mesogastropoda. As the vestigial internalized shell ofM. mollis is considered a primitive condition, the findings of this study lend support to the hypothesis that chemical defense evolved prior to shell loss in shell-less gastropods.

Impact of Deepwater Horizon Spill on food supply to deep-sea benthos communities

USGS Publications Warehouse

Prouty, Nancy G.; Swarzenski, Pamela; Mienis, Furu; Duineveld, Gerald; Demopoulos, Amanda W.J.; Ross, Steve W.; Brooke, Sandra

2016-01-01

Deep-sea ecosystems encompass unique and often fragile communities that are sensitive to a variety of anthropogenic and natural impacts. After the 2010 Deepwater Horizon (DWH) oil spill, sampling efforts documented the acute impact of the spill on some deep-sea coral colonies. To investigate the impact of the DWH spill on quality and quantity of biomass delivered to the deep-sea, a suite of geochemical tracers (e.g., stable and radio-isotopes, lipid biomarkers, and compound specific isotopes) was measured from monthly sediment trap samples deployed near a high-density deep-coral site in the Viosca Knoll area of the north-central Gulf of Mexico prior to (Oct-2008 to Sept-2009) and after the spill (Oct-10 to Sept-11). Marine (e.g., autochthonous) sources of organic matter dominated the sediment traps in both years, however after the spill, there was a pronounced reduction in marinesourced OM, including a reduction in marine-sourced sterols and n-alkanes and a concomitant decrease in sediment trap organic carbon and pigment flux. Results from this study indicate a reduction in primary production and carbon export to the deep-sea in 2010-2011, at least 6-18 months after the spill started. Whereas satellite observations indicate an initial increase in phytoplankton biomass, results from this sediment trap study define a reduction in primary production and carbon export to the deep-sea community. In addition, a dilution from a low-14C carbon source (e.g., petrocarbon) was detected in the sediment trap samples after the spill, in conjunction with a change in the petrogenic composition. The data presented here fills a critical gap in our knowledge of biogeochemical processes and sub-acute impacts to the deep-sea that ensued after the 2010 DWH spill.

Coral Reef Color: Remote and In-Situ Imaging Spectroscopy of Reef Structure and Function

NASA Astrophysics Data System (ADS)

Hochberg, E. J.

2016-02-01

Coral reefs are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of coral reef condition — proportional cover of living coral — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts reef condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on reef condition at regional to global scales. Discrimination between coral and other reef benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for reef primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. Reef calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of reef function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of reef structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict reef futures in the era of global change. This final point is the objective of CORAL (COral Reef Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between coral reef condition at the ecosystem scale and various nominal biogeophysical forcing parameters.

Consequences of ecological, evolutionary and biogeochemical uncertainty for coral reef responses to climatic stress.

PubMed

Mumby, Peter J; van Woesik, Robert

2014-05-19

Coral reefs are highly sensitive to the stress associated with greenhouse gas emissions, in particular ocean warming and acidification. While experiments show negative responses of most reef organisms to ocean warming, some autotrophs benefit from ocean acidification. Yet, we are uncertain of the response of coral reefs as systems. We begin by reviewing sources of uncertainty and complexity including the translation of physiological effects into demographic processes, indirect ecological interactions among species, the ability of coral reefs to modify their own chemistry, adaptation and trans-generational plasticity. We then incorporate these uncertainties into two simple qualitative models of a coral reef system under climate change. Some sources of uncertainty are far more problematic than others. Climate change is predicted to have an unambiguous negative effect on corals that is robust to several sources of uncertainty but sensitive to the degree of biogeochemical coupling between benthos and seawater. Macroalgal, zoanthid, and herbivorous fish populations are generally predicted to increase, but the ambiguity (confidence) of such predictions are sensitive to the source of uncertainty. For example, reversing the effect of climate-related stress on macroalgae from being positive to negative had no influence on system behaviour. By contrast, the system was highly sensitive to a change in the stress upon herbivorous fishes. Minor changes in competitive interactions had profound impacts on system behaviour, implying that the outcomes of mesocosm studies could be highly sensitive to the choice of taxa. We use our analysis to identify new hypotheses and suggest that the effects of climatic stress on coral reefs provide an exceptional opportunity to test emerging theories of ecological inheritance. Copyright © 2014 Elsevier Ltd. All rights reserved.

Urgent and Compelling Need for Coastal and Inland Aquatic Ecosystem Research Using Space-Based Sensors

NASA Astrophysics Data System (ADS)

Otis, D. B.; Muller-Karger, F. E.; Hestir, E.; Turpie, K. R.; Roberts, D. A.; Frouin, R.; Goodman, J.; Schaeffer, B. A.; Franz, B. A.; Humm, D. C.

2016-12-01

Coastal and inland waters and associated aquatic habitats, including wetlands, mangroves, submerged grasses, and coral reefs, are some of the most productive and diverse ecosystems on the planet. They provide services critical to human health, safety, and prosperity. Yet, they are highly vulnerable to changes in climate and other anthropogenic pressures. With a global population of over seven billion people and climbing, and a warming atmosphere driven by carbon dioxide now in excess of 400 ppb, these services are at risk of rapidly diminishing globally. We know little about how these ecosystems function. We need to characterize short-term changes in the functional biodiversity and biogeochemical cycles of these coastal and wetland ecosystems, from canopy to benthos, and trace these changes to their underlying environmental influences. This requires an observation-based approach that covers coastal and inland aquatic ecosystems in a repeated, synoptic manner. Space-borne sensing systems can provide this capability, supported by coordinated in situ calibration and product validation activities. The design requires high temporal resolution (weekly or better), medium spatial resolution (30 m pixels at nadir to complement Landsat-class sensors), and highly sensitive, ocean-color radiometric quality, high resolution spectroscopy with Visible and Short-Wave IR bands (order of 10 nm or better) to assess both atmospheric correction parameters and land vegetation composition. The strategy needs to include sunglint avoidance schemes, and methods to maximize signal to noise ratios and temporal coverage of aquatic areas. We describe such a system, and urge the U.S. to implement such an observing strategy in the short-term and sustain it for the benefit of humankind.

Quantifying salinity-induced changes on estuarine benthic fauna: The potential implications of climate change

NASA Astrophysics Data System (ADS)

Little, S.; Wood, P. J.; Elliott, M.

2017-11-01

Coastal and estuarine systems worldwide are under threat from global climate change, with potential consequences including an increase in salinities and incursion of saltwater into areas currently subject to tidal and non-tidal freshwater regimes. It is commonly assumed that climate-driven increases in estuarine salinities and saline incursion will be directly reflected in an upstream shift in species distributions and patterns of community composition based on salinity tolerance. This study examined the responses of benthos to medium-term salinity changes in two macrotidal river-estuary systems in SE England to test whether these responses may be representative of climate-induced salinity changes over the long-term. The study reinforced the effect of salinity, related to tidal incursion, as the primary environmental driver of benthic species distribution and community composition. Salinity, however, acted within a hierarchy of factors followed by substratum type, with biotic competition and predator-prey relationships superimposed on these. The assumption that increasing salinities will be directly reflected in a shift in species distributions and patterns of community composition upstream over the long-term was shown to be over simplistic and not representative of a complex and highly variable system. Relative Sea Level Rise (RSLR) projections were predicted to increase estuarine salinities and saline incursion in the study estuaries, which together with projected reductions in river flow will have important consequences for estuarine structure and function, particularly in tidal limnetic zones, despite estuarine communities being pre-adapted to cope with fluctuating salinities. The study identified, however, that limnic-derived fauna inhabiting these zones may demonstrate greater tolerance to salinity change than is currently recognised, and may persist where salinity increases are gradual and zones unbounded.

Centennial- to decadal scale environmental shifts in and around Lake Pannon (Vienna Basin) related to a major Late Miocene lake level rise

PubMed Central

Harzhauser, Mathias; Kern, Andrea; Soliman, Ali; Minati, Klaus; Piller, Werner E.; Danielopol, Dan L.; Zuschin, Martin

2010-01-01

A detailed ultra-high-resolution analysis of a 37-cm-long core of Upper Miocene lake sediments of the long-lived Lake Pannon has been performed. Despite a general stable climate at c. 11–9 Ma, several high-frequency oscillations of the paleoenvironments and depositional environments are revealed by the analysis over a short time span of less than 1000 years. Shifts of the lake level, associated with one major 3rd order flooding are reflected by all organisms by a cascade of environmental changes on a decadal scale. Within a few decades, the pollen record documents shifting vegetation zones due to the landward migration of the coast; the dinoflagellate assemblages switch towards “offshore-type” due to the increasing distance to the shore; the benthos is affected by low oxygen conditions due to the deepening. This general trend is interrupted by smaller scale cycles, which lack this tight interconnection. Especially, the pollen data document a clear cyclicity that is expressed by iterative low pollen concentration events. These “negative” cycles are partly reflected by dinoflagellate blooms suggesting a common trigger-mechanism and a connection between terrestrial environments and surface waters of Lake Pannon. The benthic fauna of the core, however, does not reflect these surface water cycles. This forcing mechanism is not understood yet but periodic climatic fluctuations are favoured as hypothesis instead of further lake level changes. Short phases of low precipitation, reducing pollen production and suppressing effective transport by local streams, might be a plausible mechanism. This study is the first hint towards solar activity related high-frequency climate changes during the Vallesian (Late Miocene) around Lake Pannon and should encourage further ultra-high-resolution analyses in the area. PMID:21179376

Rhythmic behaviour of marine benthopelagic species and the synchronous dynamics of benthic communities

NASA Astrophysics Data System (ADS)

Aguzzi, Jacopo; Sbragaglia, Valerio; Tecchio, Samuele; Navarro, Joan; Company, Joan B.

2015-01-01

Light-intensity cycles drive the relentless motion of species in the oceans, and water column migrants may cyclically make contact with the seabed, hence influencing the temporal dynamism of benthic ecosystems. The influence of light on this process remains largely unknown to date. In this study, we focus on the occurrence of day-night changes in benthic communities on the western Mediterranean continental shelf (100 m depth) and slope (400 m depth) as a potential result of a behaviourally sustained benthopelagic coupling. We analysed fluctuations in species abundance based on trawling at hourly intervals over a 4-day period as a proxy of activity rhythms at the seabed. We also measured light in situ to assess how the depth-related decrease of its intensity influences species rhythms and the occurrence of the putative benthopelagic synchronisation. Temporal similarities in the catch patterns for different species were screened by dendrogram analysis. On the continental shelf, species performing diel migrations (i.e., over a 24 h period) that were either vertical (i.e., benthopelagic) or horizontal across depths (i.e., nektobenthic) clustered together separately from the more sedentary endobenthic and epibenthic species. At the same depth, waveform analysis showed a significant diurnal increase in the catch of water column species and benthic species at night. Such coupling was absent on the continental slope, where light intensity was several orders of magnitude lower than that on the shelf. Our data indicate that diel activity rhythms, which are well known for vertical pelagic migrators, are also evident in the benthos. We discuss the role of light as a major evolutionary driver shaping the composition and biodiversity of benthic communities via visual predation.

Distribution and Emission of Methane in Nakdong Estuary

NASA Astrophysics Data System (ADS)

Ryu, J.; An, S.

2014-12-01

Despite a small area, coastal areas contribute most to the oceanic methane flux. A wide range of methane fluxes have been reported in the coastal areas, but limited data were presented for Korean coastal areas. The air and surface water was sampled in Nakdong Estuary where the barrage had been constructed, and methane concentrations were measured using Gas Chromatography. To see the influence of the barrage, surface water was sampled outside and inside the barrage respectively. In the expectation that methane distribution would be different depending on the tides, surface water outside the barrage was collected at high and low tide respectively. Headspace technique and Membrane Inlet Mass Spectrometry were also used. The average atmospheric concentration (1.82ppm) was lower than the global average concentration expected from the IPCC scenario. The concentrations of water inside the barrage (average 173nM) were similar to those measured in other rivers but in the lower side. The average concentrations outside the barrage (52nM at high tide, 85nM at low tide) were lower than those measured in other coastal areas, but of the same order of magnitude as the European tidal estuaries. Methane concentrations in Nakdong estuary were higher than the methane concentration equilibrated with the atmosphere. The spatial variability of methane concentration in Nakdong estuary seems to be the result of the fresh (high methane) and sea (low methane) water mixing. Meanwhile large tidal flat area in Nakdong estuary should play a major role in methane dynamics and methane flux measurements during sediment incubation were conducted to evaluate the immersion/emersion cycle and photosynthesis by MPB (micro phyto benthos) effect.

Biogenic reefs affect multiple components of intertidal soft-bottom benthic assemblages: the Lanice conchilega case study

NASA Astrophysics Data System (ADS)

De Smet, Bart; D'Hondt, An-Sofie; Verhelst, Pieterjan; Fournier, Jérôme; Godet, Laurent; Desroy, Nicolas; Rabaut, Marijn; Vincx, Magda; Vanaverbeke, Jan

2015-01-01

Biogenic reefs composed of the tube-building polychaete Lanice conchilega are important from a conservation point of view because they noticeably increase the biodiversity in otherwise species poor environments. However, up to now, little or no attention has been paid to the intertidal epi- and hyperbenthic communities associated with the reefs. Therefore, this is the first study which focuses on the effect of L. conchilega reefs on the entire bentho-pelagic community at two different locations. Environmental variables were measured and macro-, epi- and hyperbenthic communities were sampled within a L. conchilega reef and a control area at two locations in France: the bay of the Mont Saint-Michel (BMSM) and Boulogne-sur-Mer (Boulogne). The effect of the reef presence on the benthic community was studied with a 3-factor (Reef, Location and Period) Permanova. In addition, the relationship between the benthic community and the environmental variables was investigated using Distance-based linear models (DistLM). Most collected organisms were sampled in the reef area (macrobenthos: 91%, epibenthos: 81% and hyperbenthos: 78.5%) indicating that, independent of the location, the L. conchilega reefs positively affect all three associated benthic communities. However, the extent of the effect seems to be most pronounced for the macrobenthos and less distinct in case of the hyperbenthos. The macro-, and epibenthos are mainly structured by biotic variables (L. conchilega density and macrobenthic food availability respectively), while the hyperbenthos is rather structured by environmental variables. In general, L. conchilega reefs do not only affect abundances and diversity but they substantially steer the structure of the intertidal benthic sandy beach ecosystem.

Brown trout and food web interactions in a Minnesota stream

USGS Publications Warehouse

Zimmerman, J.K.H.; Vondracek, B.

2007-01-01

1. We examined indirect, community-level interactions in a stream that contained non-native brown trout (Salmo trutta Linnaeus), native brook trout (Salvelinus fontinalis Mitchill) and native slimy sculpin (Cottus cognatus Richardson). Our objectives were to examine benthic invertebrate composition and prey selection of fishes (measured by total invertebrate dry mass, dry mass of individual invertebrate taxa and relative proportion of invertebrate taxa in the benthos and diet) among treatments (no fish, juvenile brook trout alone, juvenile brown trout alone, sculpin with brook trout and sculpin with brown trout). 2. We assigned treatments to 1 m2 enclosures/exclosures placed in riffles in Valley Creek, Minnesota, and conducted six experimental trials. We used three designs of fish densities (addition of trout to a constant number of sculpin with unequal numbers of trout and sculpin; addition of trout to a constant number of sculpin with equal numbers of trout and sculpin; and replacement of half the sculpin with an equal number of trout) to investigate the relative strength of interspecific versus intraspecific interactions. 3. Presence of fish (all three species, alone or in combined-species treatments) was not associated with changes in total dry mass of benthic invertebrates or shifts in relative abundance of benthic invertebrate taxa, regardless of fish density design. 4. Brook trout and sculpin diets did not change when each species was alone compared with treatments of both species together. Likewise, we did not find evidence for shifts in brown trout or sculpin diets when each species was alone or together. 5. We suggest that native brook trout and non-native brown trout fill similar niches in Valley Creek. We did not find evidence that either species had an effect on stream communities, potentially due to high invertebrate productivity in Valley Creek. ?? 2007 Blackwell Publishing Ltd.

Benthic herbivores are not deterred by brevetoxins produced by the red tide dinoflagellate Karenia brevis.

PubMed

Sotka, Erik E; McCarty, Amanda; Monroe, Emily A; Oakman, Nicole; Van Dolah, Frances M

2009-07-01

Gulf of Mexico blooms of the dinoflagellate Karenia brevis produce neurotoxic cyclic polyethers called brevetoxins. During and after a red tide bloom in southwestern Florida, K. brevis cells lyse and release brevetoxins, which then sink to the benthos and coat the surfaces of seagrasses and their epiphytes. We tested the possibility that these brevetoxin-laden foods alter the feeding behavior and fitness of a common benthic herbivore within Floridean seagrass beds, the amphipod Ampithoe longimana. We demonstrated that coating foods with K. brevis extracts that contain brevetoxins at post-bloom concentrations (1 microg g(-1) drymass) does not alter the feeding rates of Florida nor North Carolina populations of A. longimana, although a slight deterrent effect was found at eight and ten-fold greater concentrations. During a series of feeding choice assays, A. longimana tended not to be deterred by foods coated with K. brevis extracts nor with the purified brevetoxins PbTx-2 and PbTx-3. Florida juveniles isolated with either extract-coated or control foods for 10 days did not differ in survivorship nor growth. A similar lack of feeding response to brevetoxin-laden foods also was exhibited by two other generalist herbivores of the southeastern United States, the amphipod A. valida and the urchin Arbacia punctulata. Given that benthic mesograzers constitute a significant portion of the diet for the juvenile stage of many nearshore fishes, we hypothesize that the ability of some mesograzers to feed on and retain brevetoxins in their bodies indicates that mesograzers may represent an important route of vertical transmission of brevetoxins through higher trophic levels within Gulf of Mexico estuaries.

Freshwater polychaetes (Manayunkia speciosa) near the Detroit River, western Lake Erie: Abundance and life‐history characteristics

USGS Publications Warehouse

Schloesser, Donald W.; Malakauskas, David M.; Malakauskas, Sarah J.

2016-01-01

Freshwater polychaetes are relatively rare and little-studied members of the benthos of lakes and rivers. We studied one polychaete species (Manayunkia speciosa) in Lake Erie near the mouth of the Detroit River. Abundances at one site were determined between 1961 and 2013 and life‐history characteristics at two sites were determined seasonally (March–November) in 2009–2010 and 2012–2013. Life‐history characteristics included abundances, length‐frequency distributions, presence/absence of constructed tubes, sexual maturity, and number and maturation of young of year (YOY) in tubes. Long-term abundances decreased in successive time periods between 1961 and 2003 (mean range = 57,570 to 2583/m2) but few changes occurred between 2003 and 2013 (mean = 5007/m2; range/y = 2355–8216/m2). Seasonal abundances varied substantially between sites and years, but overall, abundances were low in March–April, high in May–August, and low in September–November. Although reproduction was continuous throughout warmer months, en masse recruitment, as revealed by length–frequency distributions, occurred in a brief period late‐June to mid-July, and possibly in early-September. All life history characteristics, including tube construction, were dependent on water temperatures (> 5 °C in spring and < 15 °C in fall). These results generally agree with and complement laboratory studies of M. speciosa in the Pacific Northwest where M. speciosa hosts parasites that cause substantial fish mortalities. Although abundance ofM. speciosa near the mouth of the Detroit River was 33-fold lower in 2013 than it was in 1961, this population has persisted for five decades and, therefore, has the potential to harbor parasites that may cause fish mortalities in the Great Lakes.

DOE Office of Scientific and Technical Information (OSTI.GOV)

None

The Department of Energy's Strategic Petroleum Reserve Program began leaching the Bryan Mound salt dome and discharging brine into the coastal waters offshore of Freeport, Texas on March 10, 1980. This report describes the findings of a team of Texas A and M University scientists and engineers who have conducted a study to evaluate the effects of the Bryan Mound brine discharge on the marine environment. The study addresses the areas of physical oceanography, analysis of the discharge plume, water and sediment quality, nekton, benthos and data management. It focuses on the period from September 1982 through August 1983. Themore » ambient physical environment and its temporal and spatial variability were studied by means of continuously recording in situ current/conductivitiy/temperature meters and twelve, one-day synoptic hydrographic cruises. The quarterly water and sediment quality data show a small increase in salinity, sodium and chloride ions occurs in the bottom waters and sediment pore waters near the diffuser relative to those values measured at stations farther away. Data from the brine plume study for this reporting study show the largest areal extent within the +1 o/oo above ambient salinity contour was 40.0 km/sup 2/ which occurred on August 11, 1983. It appears that brine disposal at Bryan Mound has had neglible if any influence on the nekton community surrounding the diffuser. The benthic quarterly data from 26 stations, including 7 collections made after the diffuser outflow rate was increased to 1,000,000 barrels/day, show the total numbers of species at the diffuser station were higher than most other nearfield stations as well as many farfield stations in both the pre- and post-1,000,000 barrels/day brine flow periods. 138 references, 175 figures, 53 tables.« less

Vema-TRANSIT - An interdisciplinary study on the bathymetry of the Vema-Fracture Zone and Puerto Rico Trench as well as abyssal Atlantic biodiversity

NASA Astrophysics Data System (ADS)

Riehl, Torben; Kaiser, Stefanie; Brandt, Angelika

2018-02-01

The seafloor below 3500 m remains largely unexplored. The paucity of knowledge of abyssal and hadal environments encompasses a wide spectrum of geological and biological patterns and processes as well as their interactions. Historically most marine research has been conducted in the North Atlantic. However, the high proportion of undescribed taxa frequently discovered at greater depth there underline the need to fill in these knowledge gaps. The Vema-TRANSIT campaign in northern winter 2014-2015 surveyed and sampled along almost the entire extent of one of the major offsets of the Mid-Atlantic Ridge (MAR), the Vema Fracture Zone (VFZ), as well as the deepest trench in the Atlantic, the Puerto Rico Trench (PRT). The discoveries that were made include new data on deep-sea habitats showing geologically complex features across all crust ages from 110 Ma until present. Moreover, some new species and genera of the abyssal and hadal benthos were described herein. Not only the taxa themselves, but also their distributions and genetic structure were elucidated. In this context, significant differences in abundances, community composition, and species distribution were detected that were affected by the MAR as well as by the depth transition between hadal PRT and the adjacent abyss. Despite significant differences between eastern and western communities, the MAR does not represent an absolute barrier. Instead, the VFZ, and especially the VTF may serve as a connecting feature between east and west and this may be exemplary for fracture zones across the whole Atlantic. Nevertheless, the MAR as well as the 3000-m-depth gradient between abyss and hadal appear to restrict gene flow for poor dispersers and thus contribute to speciation processes in the deep sea.

Assessing the impact of diclofenac, ibuprofen and sildenafil citrate (Viagra®) on the fertilisation biology of broadcast spawning marine invertebrates.

PubMed

Mohd Zanuri, Norlaila Binti; Bentley, Matthew G; Caldwell, Gary S

2017-06-01

Exposure to synthetic chemicals is a key environmental challenge faced by aquatic organisms. The time and dose effects of the pharmaceuticals diclofenac, ibuprofen, and sildenafil citrate on sperm motility and successful fertilisation are studied using the echinoderms, Asterias rubens and Psammechinus miliaris, and the polychaete worm Arenicola marina, all important components of the marine benthos. Motility was reduced for all species when exposed to diclofenac concentrations ≥0.1 μg/L. Exposure to ≥1.0 μg/L of ibuprofen affected only P. miliaris gametes and fertilisation success of A. marina. A. rubens and P. miliaris sperm increased in both percentage motility and swimming velocity when exposed to sildenafil citrate at concentrations ≥18 and ≥ 50 ng/L, respectively. Pre-incubation of sperm with sildenafil citrate significantly increased fertilisation success in A. rubens and P. miliaris but not in A. marina. Pre-incubated A. rubens oocytes fertilised successfully in ibuprofen. According to EU Directive 93/67/EEC, diclofenac is classified as a very toxic substance to gametes of A. rubens, P. miliaris, and A. marina (EC 50  = 100-1000 μg/L) while ibuprofen is classified as very toxic to gametes of P. miliaris but non-toxic to gametes of A. marina (EC 50  > 10,000 μg/L). The present study indicates that diclofenac exposure may have negative impacts on invertebrate reproductive success, whereas ibuprofen potentially may compromise P. miliaris reproduction. This study provides a valuable insight into the mechanisms that allow marine invertebrates to survive and reproduce in contaminated and changing habitats. Copyright © 2017 Elsevier Ltd. All rights reserved.

A decision-making framework for sediment contamination.

PubMed

Chapman, Peter M; Anderson, Janette

2005-07-01

A decision-making framework for determining whether or not contaminated sediments are polluted is described. This framework is intended to be sufficiently prescriptive to standardize the decision-making process but without using "cook book" assessments. It emphasizes 4 guidance "rules": (1) sediment chemistry data are only to be used alone for remediation decisions when the costs of further investigation outweigh the costs of remediation and there is agreement among all stakeholders to act; (2) remediation decisions are based primarily on biology; (3) lines of evidence (LOE), such as laboratory toxicity tests and models that contradict the results of properly conducted field surveys, are assumed incorrect; and (4) if the impacts of a remedial alternative will cause more environmental harm than good, then it should not be implemented. Sediments with contaminant concentrations below sediment quality guidelines (SQGs) that predict toxicity toless than 5% of sediment-dwelling infauna and that contain no quantifiable concentrations of substances capable of biomagnifying are excluded from further consideration, as are sediments that do not meet these criteria but have contaminant concentrations equal to or below reference concentrations. Biomagnification potential is initially addressed by conservative (worst case) modeling based on benthos and sediments and, subsequently, by additional food chain data and more realistic assumptions. Toxicity (acute and chronic) and alterations to resident communities are addressed by, respectively, laboratory studies and field observations. The integrative decision point for sediments is a weight of evidence (WOE) matrix combining up to 4 main LOE: chemistry, toxicity, community alteration, and biomagnification potential. Of 16 possible WOE scenarios, 6 result in definite decisions, and 10 require additional assessment. Typically, this framework will be applied to surficial sediments. The possibility that deeper sediments may be uncovered as a result of natural or other processes must also be investigated and may require similar assessment.

Estimating In Situ Zooplankton Non-Predation Mortality in an Oligo-Mesotrophic Lake from Sediment Trap Data: Caveats and Reality Check

PubMed Central

Dubovskaya, Olga P.; Tang, Kam W.; Gladyshev, Michail I.; Kirillin, Georgiy; Buseva, Zhanna; Kasprzak, Peter; Tolomeev, Aleksandr P.; Grossart, Hans-Peter

2015-01-01

Background Mortality is a main driver in zooplankton population biology but it is poorly constrained in models that describe zooplankton population dynamics, food web interactions and nutrient dynamics. Mortality due to non-predation factors is often ignored even though anecdotal evidence of non-predation mass mortality of zooplankton has been reported repeatedly. One way to estimate non-predation mortality rate is to measure the removal rate of carcasses, for which sinking is the primary removal mechanism especially in quiescent shallow water bodies. Objectives and Results We used sediment traps to quantify in situ carcass sinking velocity and non-predation mortality rate on eight consecutive days in 2013 for the cladoceran Bosmina longirostris in the oligo-mesotrophic Lake Stechlin; the outcomes were compared against estimates derived from in vitro carcass sinking velocity measurements and an empirical model correcting in vitro sinking velocity for turbulence resuspension and microbial decomposition of carcasses. Our results show that the latter two approaches produced unrealistically high mortality rates of 0.58-1.04 d-1, whereas the sediment trap approach, when used properly, yielded a mortality rate estimate of 0.015 d-1, which is more consistent with concurrent population abundance data and comparable to physiological death rate from the literature. Ecological implications Zooplankton carcasses may be exposed to water column microbes for days before entering the benthos; therefore, non-predation mortality affects not only zooplankton population dynamics but also microbial and benthic food webs. This would be particularly important for carbon and nitrogen cycles in systems where recurring mid-summer decline of zooplankton population due to non-predation mortality is observed. PMID:26146995

Differences in benthic fauna and sediment among mangrove ( Avicennia marina var. australasica) stands of different ages in New Zealand

NASA Astrophysics Data System (ADS)

Morrisey, D. J.; Skilleter, G. A.; Ellis, J. I.; Burns, B. R.; Kemp, C. E.; Burt, K.

2003-03-01

Management of coastal environments requires understanding of ecological relationships among different habitats and their biotas. Changes in abundance and distribution of mangroves, like those of other coastal habitats, have generally been interpreted in terms of changes in biodiversity or fisheries resources within individual stands. In several parts of their range, anthropogenically increased inputs of sediment to estuaries have led to the spread of mangroves. There is, however, little information on the relative ecological properties, or conservational values, of stands of different ages. The faunal, floral and sedimentological properties of mangrove ( Avicennia marina var. australasica) stands of two different ages in New Zealand has been compared. Older (>60 years) and younger (3-12 years) stands showed clear separation on the basis of environmental characteristics and benthic macrofauna. Numbers of faunal taxa were generally larger at younger sites, and numbers of individuals of several taxa were also larger at these sites. The total number of individuals was not different between the two age-classes, largely due to the presence of large numbers of the surface-living gastropod Potamopyrgus antipodarum at the older sites. It is hypothesized that as mangrove stands mature, the focus of faunal diversity may shift from the benthos to animals living on the mangrove plants themselves, such as insects and spiders, though these were not included in the present study. Differences in the faunas were coincident with differences in the nature of the sediment. Sediments in older stands were more compacted and contained more organic matter and leaf litter. Measurement of leaf chemistry suggested that mangrove plants in the younger stands were able to take up more N and P than those in the older stands.

Ecosystem regime shifts disrupt trophic structure.

PubMed

Hempson, Tessa N; Graham, Nicholas A J; MacNeil, M Aaron; Hoey, Andrew S; Wilson, Shaun K

2018-01-01

Regime shifts between alternative stable ecosystem states are becoming commonplace due to the combined effects of local stressors and global climate change. Alternative states are characterized as substantially different in form and function from pre-disturbance states, disrupting the delivery of ecosystem services and functions. On coral reefs, regime shifts are typically characterized by a change in the benthic composition from coral to macroalgal dominance. Such fundamental shifts in the benthos are anticipated to impact associated fish communities that are reliant on the reef for food and shelter, yet there is limited understanding of how regime shifts propagate through the fish community over time, relative to initial or recovery conditions. This study addresses this knowledge gap using long-term data of coral reef regime shifts and recovery on Seychelles reefs following the 1998 mass bleaching event. It shows how trophic structure of the reef fish community becomes increasingly dissimilar between alternative reef ecosystem states (regime-shifted vs. recovering) with time since disturbance. Regime-shifted reefs developed a concave trophic structure, with increased biomass in base trophic levels as herbivorous species benefitted from increased algal resources. Mid trophic level species, including specialists such as corallivores, declined with loss of coral habitat, while biomass was retained in upper trophic levels by large-bodied, generalist invertivores. Recovering reefs also experienced an initial decline in mid trophic level biomass, but moved toward a bottom-heavy pyramid shape, with a wide range of feeding groups (e.g., planktivores, corallivores, omnivores) represented at mid trophic levels. Given the importance of coral reef fishes in maintaining the ecological function of coral reef ecosystems and their associated fisheries, understanding the effects of regime shifts on these communities is essential to inform decisions that enhance ecological resilience and economic sustainability. © 2017 by the Ecological Society of America.

Size- and food-dependent growth drives patterns of competitive dominance along productivity gradients.

PubMed

Huss, Magnus; Gårdmark, Anna; Van Leeuwen, Anieke; de Roos, André M

2012-04-01

Patterns of coexistence among competing species exhibiting size- and food-dependent growth remain largely unexplored. Here we studied mechanisms behind coexistence and shifts in competitive dominance in a size-structured fish guild, representing sprat and herring stocks in the Baltic Sea, using a physiologically structured model of competing populations. The influence of degree of resource overlap and the possibility of undergoing ontogenetic diet shifts were studied as functions of zooplankton and zoobenthos productivity. By imposing different size-dependent mortalities, we could study the outcome of competition under contrasting environmental regimes representing poor and favorable growth conditions. We found that the identity of the dominant species shifted between low and high productivity. Adding a herring-exclusive benthos resource only provided a competitive advantage over sprat when size-dependent mortality was high enough to allow for rapid growth in the zooplankton niche. Hence, the importance of a bottom-up effect of varying productivity was dependent on a strong top-down effect. Although herring could depress shared resources to lower levels than could sprat and also could access an exclusive resource, the smaller size at maturation of sprat allowed it to coexist with herring and, in some cases, exclude it. Our model system, characterized by interactions among size cohorts, allowed for consumer coexistence even at full resource overlap at intermediate productivities when size-dependent mortality was low. Observed shifts in community patterns were crucially dependent on the explicit consideration of size- and food-dependent growth. Accordingly, we argue that accounting for food-dependent growth and size-dependent interactions is necessary to better predict changes in community structure and dynamics following changes in major ecosystem drivers such as resource productivity and mortality, which are fundamental for our ability to manage exploitation of living resources in, e.g., fisheries.

Does reef structure affect oyster food resources? A stable isotope assessment.

PubMed

Blomberg, Brittany N; Lebreton, Benoit; Palmer, Terence A; Guillou, Gaël; Beseres Pollack, Jennifer; Montagna, Paul A

2017-06-01

As ecosystem engineers, oysters create and maintain structured habitat and can influence trophodynamics and benthic-pelagic coupling in the surrounding landscape. The physical reef structure and associated biotic parameters can affect the availability of food resources for oysters. Oysters and potential composite food sources - suspended particulate organic matter (SPOM) and surface sediment organic matter (SSOM) - were assessed using a dual stable isotope (δ 13 C, δ 15 N) approach at three reef types (natural, restored, and unconsolidated) seasonally for two years to determine if changes in physical and/or biotic parameters affected the relative availability and/or use of food resources by oysters. SPOM was more depleted in 13 C (-24.2 ± 0.6‰, mean ± SD) than SSOM (-21.2 ± 0.8‰). SPOM composition is likely dominated by autochthonous phytoplankton production, while SSOM includes trapped phytoplankton and benthic microalgae. SSOM was used by oysters in increasing proportions relative to SPOM over time at all reef types. This temporal trend is likely due to increased oyster biomass over time, promoting enhanced microphytobenthos growth through feedback effects related to oyster biodeposits. Structural differences between reef types observed in this study had no effect on food resource availability and use by oysters, indicating strong bentho-pelagic coupling likely due to shallow depths as well as strong and consistent winds. This study provides insights for restoration of oyster reefs as it highlights that food resources used by oysters remain similar among reef types despite changes in abiotic and biotic parameters among habitats and over time. Copyright © 2017 Elsevier Ltd. All rights reserved.

Recovery of a Temperate Reef Assemblage in a Marine Protected Area following the Exclusion of Towed Demersal Fishing

PubMed Central

Sheehan, Emma V.; Stevens, Timothy F.; Gall, Sarah C.; Cousens, Sophie L.; Attrill, Martin J.

2013-01-01

Marine Protected Areas MPA have been widely used over the last 2 decades to address human impacts on marine habitats within an ecosystem management context. Few studies have quantified recovery of temperate rocky reef communities following the cessation of scallop dredging or demersal trawling. This is critical information for the future management of these habitats to contribute towards conservation and fisheries targets. The Lyme Bay MPA, in south west UK, has excluded towed demersal fishing gear from 206 km2 of sensitive reef habitat using a Statutory Instrument since July 2008. To assess benthic recovery in this MPA we used a flying video array to survey macro epi-benthos annually from 2008 to 2011. 4 treatments (the New Closure, previously voluntarily Closed Controls and Near or Far Open to fishing Controls) were sampled to test a recovery hypothesis that was defined as ‘the New Closure becoming more similar to the Closed Controls and less similar to the Open Controls’. Following the cessation of towed demersal fishing, within three years positive responses were observed for species richness, total abundance, assemblage composition and seven of 13 indicator taxa. Definitive evidence of recovery was noted for species richness and three of the indicator taxa (Pentapora fascialis, Phallusia mammillata and Pecten maximus). While it is hoped that MPAs, which exclude anthropogenic disturbance, will allow functional restoration of goods and services provided by benthic communities, it is an unknown for temperate reef systems. Establishing the likely timescales for restoration is key to future marine management. We demonstrate the early stages of successful recruitment and link these to the potential wider ecosystem benefits including those to commercial fisheries. PMID:24391841

Changes of benthic fauna in the Kattegat - An indication of climate change at mid-latitudes?

NASA Astrophysics Data System (ADS)

Göransson, Peter

2017-07-01

Several predictions point to changes in the marine benthic macrofauna associated with climate change, but so far only a few and minor changes have been reported. This study relates observed changes in the species composition to climate change by looking on the past decades in the Kattegat between Denmark and Sweden. A reduction of the total number species and a reduction of species with a northern range parallel to an increase of species with a southern range have been observed. The most likely explanation of the changes is the increase in temperature of the bottom water. Increased temperature could change the species distributions but also decrease primary production which impacts recruitment and growth. Hypoxia and bottom trawling could also act synergistic in this process. A sparse occurrence of previously encountered Arctic-Boreal species and critical foundation species, which gives the area its special character, suggests a change in biodiversity and might therefore be designated as early warning signals of a warmer climate. The northern fauna below the halocline with limited capacity of dispersal and low reproduction potential, can be considered as sensitive with low adaptive capacity to climate change. Therefore, not only tropical and high-latitude species, but also benthos on deep bottoms at mid-latitudes, could be vulnerable to warming. As many species live at the edge of their range in the Kattegat, and also are dependent of distant recruitment, large scale changes will probably be detected here at an early stage. It is important to protect relatively undisturbed reference areas in the Kattegat for future studies, but also for preserving a large number of ecosystem services, biotopes, habitats, and fish species.

Suspended Alexandrium spp. hypnozygote cysts in the Gulf of Maine

NASA Astrophysics Data System (ADS)

Kirn, Sarah L.; Townsend, David W.; Pettigrew, Neal R.

2005-09-01

The life cycle of dinoflagellates of the genus Alexandrium includes sexual reproduction followed by the formation of a dormant hypnozygote cyst, which serves as a resting stage. Negatively buoyant cysts purportedly fall to the benthos where they undergo a mandatory period of quiescence. Previous reports of cysts in the surficial sediments of the Gulf of Maine, where Alexandrium blooms are well documented, show a broad distribution of cysts, with highest concentrations generally in sediments below 100 m depth. We report here an exploration of cysts suspended in the water column, where they would be better positioned to inoculate springtime Alexandrium populations. During cruises in February, April, and June of 2000, water samples were collected at depths just off the bottom (within 5 m), at the top of the bottom nepheloid layer, and near the surface (1 m) and examined for cyst concentrations. Suspended cysts were found throughout the Gulf of Maine and westernmost Bay of Fundy. Planktonic cyst densities were generally greater in near-bottom and top of the bottom nepheloid layer samples than in near-surface water samples; densities were of the order of 10 2 cysts m -3 in surface waters, and 10 2-10 3 cysts m -3 at near-bottom depths. Temporally, they were most abundant in February and least abundant in April. Reports by earlier workers of cysts in the underlying sediments were on the order of 10 3 cysts cm -3. We present calculations that demonstrate the likelihood of cyst resuspension from bottom sediments forced by swell and tidal currents, and propose that such resuspended cysts are important in inoculating the seasonal bloom. We estimate that suspended cysts may contribute significantly to the annual vegetative cell population in the Gulf of Maine.

Recovery of a temperate reef assemblage in a marine protected area following the exclusion of towed demersal fishing.

PubMed

Sheehan, Emma V; Stevens, Timothy F; Gall, Sarah C; Cousens, Sophie L; Attrill, Martin J

2013-01-01

Marine Protected Areas MPA have been widely used over the last 2 decades to address human impacts on marine habitats within an ecosystem management context. Few studies have quantified recovery of temperate rocky reef communities following the cessation of scallop dredging or demersal trawling. This is critical information for the future management of these habitats to contribute towards conservation and fisheries targets. The Lyme Bay MPA, in south west UK, has excluded towed demersal fishing gear from 206 km(2) of sensitive reef habitat using a Statutory Instrument since July 2008. To assess benthic recovery in this MPA we used a flying video array to survey macro epi-benthos annually from 2008 to 2011. 4 treatments (the New Closure, previously voluntarily Closed Controls and Near or Far Open to fishing Controls) were sampled to test a recovery hypothesis that was defined as 'the New Closure becoming more similar to the Closed Controls and less similar to the Open Controls'. Following the cessation of towed demersal fishing, within three years positive responses were observed for species richness, total abundance, assemblage composition and seven of 13 indicator taxa. Definitive evidence of recovery was noted for species richness and three of the indicator taxa (Pentapora fascialis, Phallusia mammillata and Pecten maximus). While it is hoped that MPAs, which exclude anthropogenic disturbance, will allow functional restoration of goods and services provided by benthic communities, it is an unknown for temperate reef systems. Establishing the likely timescales for restoration is key to future marine management. We demonstrate the early stages of successful recruitment and link these to the potential wider ecosystem benefits including those to commercial fisheries.

Episodic eruptions of volcanic ash trigger a reversible cascade of nuisance species outbreaks in pristine coral habitats.

PubMed

Schils, Tom

2012-01-01

Volcanically active islands abound in the tropical Pacific and harbor complex coral communities. Whereas lava streams and deep ash deposits are well-known to devastate coral communities through burial and smothering, little is known about the effect of moderate amounts of small particulate ash deposits on reef communities. Volcanic ash contains a diversity of chemical compounds that can induce nutrient enrichments triggering changes in benthic composition. Two independently collected data sets on the marine benthos of the pristine and remote reefs around Pagan Island, Northern Mariana Islands, reveal a sudden critical transition to cyanobacteria-dominated communities in 2009-2010, which coincides with a period of continuous volcanic ash eruptions. Concurrently, localized outbreaks of the coral-killing cyanobacteriosponge Terpios hoshinota displayed a remarkable symbiosis with filamentous cyanobacteria, which supported the rapid overgrowth of massive coral colonies and allowed the sponge to colonize substrate types from which it has not been documented before. The chemical composition of tephra from Pagan indicates that the outbreak of nuisance species on its reefs might represent an early succession stage of iron enrichment (a.k.a. "black reefs") similar to that caused by anthropogenic debris like ship wrecks or natural events like particulate deposition from wildfire smoke plumes or desert dust storms. Once Pagan's volcanic activity ceased in 2011, the cyanobacterial bloom disappeared. Another group of well-known nuisance algae in the tropical Pacific, the pelagophytes, did not reach bloom densities during this period of ash eruptions but new species records for the Northern Mariana Islands were documented. These field observations indicate that the study of population dynamics of pristine coral communities can advance our understanding of the resilience of tropical reef systems to natural and anthropogenic disturbances.

Dietary assimilation of cadmium associated with bacterial exopolymer sediment coatings by the estuarine amphipod Leptocheirus plumulosus: Effects of Cd concentration and salinity

USGS Publications Warehouse

Schlekat, C.E.; Decho, Alan W.; Chandler, G.T.

1999-01-01

Bacterial extracellular substances (also known as exopolysaccharides, or EPS) may serve as vectors for trophic transfer of metals in benthic systems because these ubiquitous sediment coatings can sorb high concentrations of toxic metals, and because many benthic invertebrates assimilate EPS sediment coatings upon ingestion. We conducted 3 sets of experiments to determine the assimilative bioavailability of EPS-associated Cd to the benthic amphipod Leptocheirus plumulosus as a function of Cd concentration and salinity. Bioavailability was measured as L. plumulosus Cd assimilation efficiency (AE) from EPS-coated silica (EPS-Si) and from uncoated silica (NC-Si) using modified pulse-chase methods with the gamma-emitting radioisotope 109Cd. Cd AE was significantly greater from NC-Si than from EPS-Si at 7.5???, but not at 2.5 or 25???. Overall, Cd AE from EPS-Si was between 15.1 and 21.5%. Because EPS-Si sorbed more Cd than NC-Si, EPS coatings magnified the amount of Cd amphipods accumulated at each salinity by up to a factor of 10. Salinity did not directly affect Cd AE from EPS-Si, but because Cd-EPS partitioning increased with decreasing salinity, amphipods accumulated more Cd from EPS at the lowest Cd-EPS incubation salinity (2.5 ???) than at higher salinities (7.5 and 25 ???). Finally, Cd concentration in EPS exhibited an inverse relationship with Cd AE at 2.5 ???, but not at 25 ???. Specifically, Cd AE was 12 times greater at 1 compared with 10 ??g Cd ??g-1 EPS. Together, these results show that estuarine benthos can accumulate Cd from EPS sediment coatings, but that the degree to which this phenomenon occurs is dependent upon seawater salinity and Cd concentration in EPS.

Coral Reef Color: Remote and In-Situ Imaging Spectroscopy of Reef Structure and Function

NASA Astrophysics Data System (ADS)

Hochberg, E. J.

2015-12-01

Coral reefs are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of coral reef condition — proportional cover of living coral — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts reef condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on reef condition at regional to global scales. Discrimination between coral and other reef benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for reef primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. Reef calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of reef function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of reef structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict reef futures in the era of global change. This final point is the objective of CORAL (COral Reef Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between coral reef condition at the ecosystem scale and various nominal biogeophysical forcing parameters.

Indirect effects of overfishing on Caribbean reefs: sponges overgrow reef-building corals.

PubMed

Loh, Tse-Lynn; McMurray, Steven E; Henkel, Timothy P; Vicente, Jan; Pawlik, Joseph R

2015-01-01

Consumer-mediated indirect effects at the community level are difficult to demonstrate empirically. Here, we show an explicit indirect effect of overfishing on competition between sponges and reef-building corals from surveys of 69 sites across the Caribbean. Leveraging the large-scale, long-term removal of sponge predators, we selected overfished sites where intensive methods, primarily fish-trapping, have been employed for decades or more, and compared them to sites in remote or marine protected areas (MPAs) with variable levels of enforcement. Sponge-eating fishes (angelfishes and parrotfishes) were counted at each site, and the benthos surveyed, with coral colonies scored for interaction with sponges. Overfished sites had >3 fold more overgrowth of corals by sponges, and mean coral contact with sponges was 25.6%, compared with 12.0% at less-fished sites. Greater contact with corals by sponges at overfished sites was mostly by sponge species palatable to sponge predators. Palatable species have faster rates of growth or reproduction than defended sponge species, which instead make metabolically expensive chemical defenses. These results validate the top-down conceptual model of sponge community ecology for Caribbean reefs, as well as provide an unambiguous justification for MPAs to protect threatened reef-building corals. An unanticipated outcome of the benthic survey component of this study was that overfished sites had lower mean macroalgal cover (23.1% vs. 38.1% for less-fished sites), a result that is contrary to prevailing assumptions about seaweed control by herbivorous fishes. Because we did not quantify herbivores for this study, we interpret this result with caution, but suggest that additional large-scale studies comparing intensively overfished and MPA sites are warranted to examine the relative impacts of herbivorous fishes and urchins on Caribbean reefs.

Exceptionally prolonged tooth formation in elasmosaurid plesiosaurians

PubMed Central

Kear, Benjamin P.; Larsson, Dennis; Lindgren, Johan; Kundrát, Martin

2017-01-01

Elasmosaurid plesiosaurians were globally prolific marine reptiles that dominated the Mesozoic seas for over 70 million years. Their iconic body-plan incorporated an exceedingly long neck and small skull equipped with prominent intermeshing ‘fangs’. How this bizarre dental apparatus was employed in feeding is uncertain, but fossilized gut contents indicate a diverse diet of small pelagic vertebrates, cephalopods and epifaunal benthos. Here we report the first plesiosaurian tooth formation rates as a mechanism for servicing the functional dentition. Multiple dentine thin sections were taken through isolated elasmosaurid teeth from the Upper Cretaceous of Sweden. These specimens revealed an average of 950 daily incremental lines of von Ebner, and infer a remarkably protracted tooth formation cycle of about 2–3 years–other polyphyodont amniotes normally take ~1–2 years to form their teeth. Such delayed odontogenesis might reflect differences in crown length and function within an originally uneven tooth array. Indeed, slower replacement periodicity has been found to distinguish larger caniniform teeth in macrophagous pliosaurid plesiosaurians. However, the archetypal sauropterygian dental replacement system likely also imposed constraints via segregation of the developing tooth germs within discrete bony crypts; these partly resorbed to allow maturation of the replacement teeth within the primary alveoli after displacement of the functional crowns. Prolonged dental formation has otherwise been linked to tooth robustness and adaption for vigorous food processing. Conversely, elasmosaurids possessed narrow crowns with an elongate profile that denotes structural fragility. Their apparent predilection for easily subdued prey could thus have minimized this potential for damage, and was perhaps coupled with selective feeding strategies that ecologically optimized elasmosaurids towards more delicate middle trophic level aquatic predation. PMID:28241059

Drifting algae and zoobenthos — Effects on settling and community structure

NASA Astrophysics Data System (ADS)

Bonsdorff, Erik

Shallow (5 to 10 m) sandy bottoms in the Baltic Sea are important areas for zoobenthic production. The infaunal communities are generally governed by the hydrographical conditions are transport of the sediment through wind effects. With increasing eutrophication in the Baltic Sea, drifting mats of annual algae ( Cladophora, Stictyosiphon, Polysiphonia, Rhodemela, Sphacelaria, Pilayella, Furcellaria, Ceramium, etc) have become increasingly common, adding to the structuring and regulating factors for the infauna. In 1990 and 91, a field-study (SCUBA diving; zoobenthos and algae sampling) was carried out in the Åland archipelogo, in thennorthern and their structuring effect on the zoobenthos. Algal biomass increased from 150 ± 19 g DW·m -2 in 1990 to 832±60 g DW·m -2 in 1991, having no effect on oxygen saturation in 1990, but showing signs of reduced oxygen saturation in 1991. Organic content of the sediment remained stable (0.60 to 0.74%) during the entire study period. The zoobenthic community showed significant responses to the drifting algae at population level and in terms of community structure (by 1991: significantly reduced species number; low similarity values (40 to 65%) between bare sand and under the algae). The main species affected were the dominating bivalve Macoma balthica, the polychaetes Pygospio elegans and Manayunkia aestuarina, and the amphipod Corophium volutator. The settlement of M. balthica spat was significantly reduced by the algae (>70% in 1990/91), and no individuals of the dominating polychaetes were recorded under the mat. C. volutator, however, benefited from the algae, and greatly increased in numbers. The results clearly demonstrate the types of physical effects drift-algae will have no sandy-bottom benthos, and show that significant changes in the communities over large areas can be expected with increasing eutrophication.

Mercury accumulation in marine fish most favoured by Malaysian women, the predictors and the potential health risk.

PubMed

Jeevanaraj, Pravina; Hashim, Zailina; Elias, Saliza Mohd; Aris, Ahmad Zaharin

2016-12-01

We identified marine fish species most preferred by women at reproductive age in Selangor, Malaysia, mercury concentrations in the fish muscles, factors predicting mercury accumulation and the potential health risk. Nineteen most preferred marine fish species were purchased (n = 175) from selected fisherman's and wholesale market. Length, weight, habitat, feeding habit and trophic level were recognised. Edible muscles were filleted, dried at 80 °C, ground on an agate mortar and digested in Multiwave 3000 using HNO 3 and H 2 O 2 . Total mercury was quantified using VP90 cold vapour system with N 2 carrier gas. Certified reference material DORM-4 was used to validate the results. Fish species were classified as demersal (7) and pelagic (12) or predators (11), zoo benthos (6) and planktivorous (2). Length, weight and trophic level ranged from 10.5 to 75.0 cm, 0.01 to 2.50 kg and 2.5 to 4.5, respectively. Geometric mean of total mercury ranged from 0.21 to 0.50 mg/kg; maximum in golden snapper (0.90 mg/kg). Only 9 % of the samples exceeded the JECFA recommendation. Multiple linear regression found demersal, high trophic (≥4.0) and heavier fishes to accumulate more mercury in muscles (R 2  = 27.3 %), controlling for all other factors. About 47 % of the fish samples contributed to mercury intake above the provisional tolerable level (45 μg/day). While only a small portion exceeded the JECFA fish Hg guideline, the concentration reported may be alarming for heavy consumers. Attention should be given in risk management to avoid demersal and high trophic fish, predominantly heavier ones.

Twenty-year changes in coral near Muscat, Oman estimated from manta board tow observations.

PubMed

Coles, Steve L; Looker, Elayne; Burt, John A

2015-02-01

The coastline of Muscat, Oman, contains some of the most extensive and diverse coral reefs in the northeastern Arabian Peninsula. In the past two decades this region has been impacted by expanding coastal development, the largest cyclone ever recorded in the Arabian Sea, and a large-scale harmful algal bloom which resulted in mass mortality of reefs elsewhere in the Gulf of Oman. In 2012 we estimated live and dead coral using manta tow observations on 370 transects at 13 locations along the coastline and nearshore islands of Muscat Oman. We compared these estimates against observations made on 389 transects at the same 13 locations two decades earlier (1993-94) in order to determine long-term changes in benthos along the Muscat coast. Results were mapped and differences in categorical mean values for transect locations were statistically compared between survey years. Live hard and soft coral decreased over the past two decades at most survey sites, and decreases were significant at three exposed coastline sites and one semi-enclosed embayment. One sheltered embayment site showed a significant increase in live hard coral over the study period. Declines in live hard coral were associated with increases in dead coral framework at 8 of the 13 sites, but these changes were non-significant. We attribute these changes primarily to long-term effects of Cyclone Gonu, which struck the Oman coast in June 2007. The study results suggest that the manta tow method can be an effective way to detect long-term changes in coral and other benthic parameters over large areas, despite limitations on its precision. Copyright © 2014 Elsevier Ltd. All rights reserved.

Linking benthic community structure to terrestrial runoff and upwelling in the coral reefs of northeastern Hainan Island

NASA Astrophysics Data System (ADS)

Li, Xiubao; Wang, Daoru; Huang, Hui; Zhang, Jing; Lian, Jiansheng; Yuan, Xiangcheng; Yang, Jianhui; Zhang, Guoseng

2015-04-01

Near-shore coral reefs in northeastern Hainan Island are close to river mouths and aquaculture ponds, and also located at the center of the Qiongdong Upwelling (QDU). However, it is still unclear how terrestrial runoff and upwelling influence the community composition and spatial distribution of the benthos. During three cruises in 2010 and 2011 in Wenchang, northeastern Hainan Island, we determined a subset of environmental parameters in seawater (e.g. temperature, salinity, DO, dissolved inorganic nutrient (DIN), turbidity and transparency) and macroalgal δ15N and investigated the benthic communities (e.g. live coral cover, coral species richness, juvenile coral density, macroalgal cover and coverage of calcified algae) by video transect and visual census techniques at 10 stations (i.e. 1S-6D). The results showed that the QDU has influenced the reef waters in Wenchang. In 2011, the upwelling started in early May, peaked in July and disappeared in September and most upwelling events lasted for 1-2 weeks between May and July. The results also demonstrated that the reef water was nutrient enriched. Stations close to the river mouth and aquaculture ponds had higher levels of DIN and a higher percentage of ammonia in DIN, and there was consistently lower live coral cover, juvenile coral density and higher macroalgal cover. At some stations in this study, live coral cover was negatively correlated with macroalgal cover (i.e. 2S-6D). Live coral cover, species richness, and juvenile coral density all increased with the distance away from the river outlet and decreased with the rise of DIN. These results suggest that terrestrial runoff and upwelling stimulate nutrient enrichment, and that overgrowing macroalgae has an important influence on the coral communities in northeastern Hainan Island.

Trawl disturbance on benthic communities: chronic effects and experimental predictions.

PubMed

Hinz, Hilmar; Prieto, Virginia; Kaiser, Michel J

2009-04-01

Bottom trawling has widespread impacts on benthic communities and habitats. While the direct impacts of trawl disturbances on benthic communities have been extensively studied, the consequences from long-term chronic disturbances are less well understood. The response of benthic macrofauna to chronic otter-trawl disturbance from a Nephrops norvegicus (Norway lobster) fishery was investigated along a gradient of fishing intensity over a muddy fishing ground in the northeastern Irish Sea. Chronic otter trawling had a significant, negative effect on benthic infauna abundance, biomass, and species richness. Benthic epifauna abundance and species richness also showed a significant, negative response, while no such effect was evident for epibenthic biomass. Furthermore, chronic trawl disturbance led to clear changes in community composition of benthic infauna and epifauna. The results presented indicate that otter-trawl impacts are cumulative and can lead to profound changes in benthic communities, which may have far-reaching implications for the integrity of marine food webs. Studies investigating the short-term effects of fishing manipulations previously concluded that otter trawling on muddy substrates had only modest effects on the benthic biota. Hence, the results presented by this study highlight that data from experimental studies can not be readily extrapolated to an ecosystem level and that subtle cumulative effects may only become apparent when fishing disturbances are examined over larger spatial and temporal scales. Furthermore, this study shows that data on chronic effects of bottom trawling on the benthos will be vital in informing the recently advocated move toward an ecosystem approach in fisheries management. As bottom-trawl fisheries are expanding into ever deeper muddy habitats, the results presented here are an important step toward understanding the global ecosystem effects of bottom trawling.

Benthic nutrient sources to hypereutrophic Upper Klamath Lake, Oregon, USA

USGS Publications Warehouse

Kuwabara, J.S.; Topping, B.R.; Lynch, D.D.; Carter, J.L.; Essaid, H.I.

2009-01-01

Three collecting trips were coordinated in April, May, and August 2006 to sample the water column and benthos of hypereutrophic Upper Klamath Lake (OR, USA) through the annual cyanophyte bloom of Aphanizomenon flos-aquae. A porewater profiler was designed and fabricated to obtain the first high-resolution (centimeter-scale) estimates of the vertical, concentration gradients of macro- and micronutrients for diffusive-flux determinations. A consistently positive benthic flux for soluble reactive phosphorus (SRP) was observed with solute release from the sediment, ranging between 0.4 and 6.1 mg/m2/d. The mass flux over an approximate 200-km2 lake area was comparable in magnitude to riverine inputs. An additional concern, related to fish toxicity was identified when dissolved ammonium also displayed consistently positive benthic fluxes of 4 to 134 mg/m2/d, again, comparable to riverine inputs. Although phosphorus was a logical initial choice by water quality managers for the limiting nutrient when nitrogen-fixing cyanophytes dominate, initial trace-element results from the lake and major inflowing tributaries suggested that the role of iron limitation on primary productivity should be investigated. Dissolved iron became depleted in the lake water column during the course of the algal bloom, while dissolved ammonium and SRP increased. Elevated macroinvertebrate densities, at least of the order of 104 individuals/m2, suggested, that the diffusive-flux estimates may be significantly enhanced, by bioturbation. In addition, heat-flux modeling indicated that groundwater advection of nutrients could also significantly contribute to internal nutrient loading. Accurate environmental assessments of lentic systems and reasonable expectations for point-source management require quantitative consideration of internal solute sources ?? 2009 SETAC.

Correlation of resource plays and biodiversity patterns: accumulation of organic-rich shale tracks taxonomic turnover

USGS Publications Warehouse

Eoff, Jennifer D.

2012-01-01

Similar paleogeographic and paleotectonic settings characterize most self-sourced shale hydrocarbon plays. Their deposition occurred within similar orders of magnitude of eustatic events and during geologic periods characterized by “warm” (or transitional) climates and calcitic seas. In addition, the stratigraphic occurrence of shale plays parallels certain historical patterns of marine metazoan biodiversity. Such strong agreement among several correlation tools elucidates why these resources may be limited to discrete intervals of geological time. Correlation of self-sourced shale with biodiversity trends indicates that the factors controlling the deposition of marine organic matter may not be independent of those that induced taxonomic turnover. Paleoecological changes promoted accumulation and preservation of Type II kerogen. Deposition of self-sourced shale appears to correspond to reductions in absolute biodiversity and declining percentages of bioturbating taxa, with concomitant increases in proportions of pelagic taxa relative to infaunal and epifaunal organisms. Whereas upwelling and anoxia may have contributed to the deposition of kerogen in source rocks throughout much of the sedimentary record, diminished consumption of biomass by benthic metazoans likely augmented the preservation of organic carbon during deposition of this shale type. Rapid tectonic-plate reconfiguration induced coeval events, creating basins with sufficiently high rates of accommodation creation necessary to preserve additional organic material accumulating as the heterotrophic benthos suffered in response to rapidly changing environments. Combining sea-level curves, paleogeography, climate, and seawater chemistry provides a first-order approximation of the distribution of potential self-sourced shale in the geologic record. A model that predicts the stratigraphic distribution of self-sourced-shale deposition can aid in exploration of continuous hydrocarbon accumulations in self-sourced reservoirs globally.

Middle Devonian depositional environments for Rapid Member (Cedar Valley Group) interpreted from exposures at the Coralville spillway and elsewhere in eastern Iowa

DOE Office of Scientific and Technical Information (OSTI.GOV)

Witzke, B.J.; Bunker, B.J.

1994-04-01

Ongoing studies of the Cedar Valley Group were fortuitously aided by the exhumation of Rapid Mbr (Little Cedar Fm) carbonate strata below the coralville spillway, Johnson Co., Iowa, during the summer floods of 1993. Extensive bedding-plane exposures provided an exceptional opportunity to document fine-scale lateral biotic and lithologic variations within the member, and to compare these with data from elsewhere in eastern Iowa. The base of the Rapid Mbr is drawn at an abrupt lithic change above packstones of the Solon Mbr, marking a regional transgressive event. The basal 2.6 m of the Rapid is dominated by argillaceous skeletal wackestonesmore » with common brachiopods and echinoderm debris, interspersed with thin mudstones. The overlying 4 m comprises a series of 50--100 cm thick couplets which display alternations of thin mudstones and thicker brachiopod-rich wackepackstones. The next unit (2.9 m) is dominated by sparse-skeletal argillaceous mudstones. The paucity of burrowing and skeletal benthos through much of the unit is interpreted to reflect bottom oxygen stress in a relatively deep, possibly stratified cratonic seaway. Nevertheless, skeletal horizons within the unit indicate episodically favorable benthic conditions. The mudstone unit shallows upward into a brachiopod-rich wackestone interval which is, in turn, capped by a condensed horizon of phosphatic and glauconitic enrichment (near base of subterminus Fauna). Above this, two regionally extensive coral-rich biostromes occur. Upper Rapid strata show a complex of wackestone and packstone facies, with glauconitic enrichment and hardgrounds noted. The member is capped by shoal-water grainstones in the Coralville area, and by peritidal facies in northern Iowa.« less

Integrating Ecosystem Engineering and Food Web Ecology: Testing the Effect of Biogenic Reefs on the Food Web of a Soft-Bottom Intertidal Area

PubMed Central

De Smet, Bart; Fournier, Jérôme; De Troch, Marleen; Vincx, Magda; Vanaverbeke, Jan

2015-01-01

The potential of ecosystem engineers to modify the structure and dynamics of food webs has recently been hypothesised from a conceptual point of view. Empirical data on the integration of ecosystem engineers and food webs is however largely lacking. This paper investigates the hypothesised link based on a field sampling approach of intertidal biogenic aggregations created by the ecosystem engineer Lanice conchilega (Polychaeta, Terebellidae). The aggregations are known to have a considerable impact on the physical and biogeochemical characteristics of their environment and subsequently on the abundance and biomass of primary food sources and the macrofaunal (i.e. the macro-, hyper- and epibenthos) community. Therefore, we hypothesise that L. conchilega aggregations affect the structure, stability and isotopic niche of the consumer assemblage of a soft-bottom intertidal food web. Primary food sources and the bentho-pelagic consumer assemblage of a L. conchilega aggregation and a control area were sampled on two soft-bottom intertidal areas along the French coast and analysed for their stable isotopes. Despite the structural impacts of the ecosystem engineer on the associated macrofaunal community, the presence of L. conchilega aggregations only has a minor effect on the food web structure of soft-bottom intertidal areas. The isotopic niche width of the consumer communities of the L. conchilega aggregations and control areas are highly similar, implying that consumer taxa do not shift their diet when feeding in a L. conchilega aggregation. Besides, species packing and hence trophic redundancy were not affected, pointing to an unaltered stability of the food web in the presence of L. conchilega. PMID:26496349

Community structure and trophic ecology of megabenthic fauna from the deep basins in the Interior Sea of Chiloé, Chile (41-43° S)

NASA Astrophysics Data System (ADS)

Zapata-Hernández, Germán; Sellanes, Javier; Thiel, Martin; Henríquez, Camila; Hernández, Sebastián; Fernández, Julio C. C.; Hajdu, Eduardo

2016-11-01

Estuarine environments are complex ecological systems, which depend on multiple inputs of organic sources that could support their benthic communities. The deep-water megabenthic communities of the Interior Sea of Chiloé (ISCh, northern part of the fjord region of Chile) were studied to characterize their taxonomic composition and to trace the energy pathways supporting them by using stable isotope analysis (SIA). Megabenthic and demersal organisms as well as sunken macroalgal debris and terrestrial organic matter (TOM: wood, leaves, branches) were obtained by bottom trawling along an estuarine gradient covering 100-460 m water depth. Additionally, particulate organic matter (POM) and the sedimentary organic matter (SOM) were sampled and carbon (δ13C) and nitrogen (δ15N) isotope ratios were determined for all these organisms and potential food sources. A total of 140 taxa were obtained, including invertebrates (e.g. polychaetes, mollusks, crustaceans and echinoderms) bony fishes, rays and sharks. Based on the stable isotope values it was possible to infer a strong dependence on primary production derived from phytoplankton which is exported to the benthos. A potentially important contribution from sunken macroalgae to megabenthic consumers was established only for some invertebrates, such as the irregular echinoid Tripylaster philippii and the decapod Eurypodius latreillii. The trophic structure metrics suggest a similar isotopic niche width, trophic diversity and species packaging in the food webs among the major basins in the ISCh. It is thus concluded that the benthic food webs are supported principally by surface primary production, but macroalgal subsidies could be exploited by selected invertebrate taxa (e.g. detritivores) and terrestrial carbon pathways are important for certain specialized taxa (e.g. Xylophaga dorsalis).

The importance of benchmarking habitat structure and composition for understanding the extent of fishing impacts in soft sediment ecosystems

NASA Astrophysics Data System (ADS)

Handley, Sean J.; Willis, Trevor J.; Cole, Russell G.; Bradley, Anna; Cairney, Daniel J.; Brown, Stephen N.; Carter, Megan E.

2014-02-01

Trawling and dredge fisheries remove vulnerable fauna, homogenise sediments and assemblages, and break down biogenic habitats, but the full extent of these effects can be difficult to quantify in the absence of adequate control sites. Our study utilised rare control sites containing biogenic habitat, the Separation Point exclusion zone, formally protected for 28 years, as the basis for assessing the degree of change experienced by adjacent areas subject to benthic fishing. Sidescan sonar surveys verified that intensive trawling and dredging occurred in areas adjacent to, but not inside, the exclusion area. We compared sediment composition, biogenic cover, macrofaunal assemblages, biomass, and productivity of the benthos, inside and outside the exclusion zone. Disturbed sites were dominated by fine mud, with little or no shell-gravel, reduced number of species, and loss of large bodied animals, with concomitant reductions in biomass and productivity. At protected sites, large, rarer molluscs were more abundant and contributed the most to size-based estimates of productivity and biomass. Functional changes in fished assemblages were consistent with previously reported relative increases in scavengers, predators and deposit feeders at the expense of filter feeders and a grazer. We propose that the colonisation of biogenic species in protected sites was contingent on the presence of shell-gravel atop these soft sediments. The process of sediment homogenisation by bottom fishing and elimination of shell-gravels from surficial sediments appeared to have occurred over decades - a ‘shifting baseline’. Therefore, benchmarking historical sediment structure at control site like the Separation Point exclusion zone is necessary to determine the full extent of physical habitat change wrought by contact gears on sheltered soft sediment habitats to better underpin appropriate conservation, restoration or fisheries management goals.

Morphological divergence between three Arctic charr morphs - the significance of the deep-water environment.

PubMed

Skoglund, Sigrid; Siwertsson, Anna; Amundsen, Per-Arne; Knudsen, Rune

2015-08-01

Morphological divergence was evident among three sympatric morphs of Arctic charr (Salvelinus alpinus (L.)) that are ecologically diverged along the shallow-, deep-water resource axis in a subarctic postglacial lake (Norway). The two deep-water (profundal) spawning morphs, a benthivore (PB-morph) and a piscivore (PP-morph), have evolved under identical abiotic conditions with constant low light and temperature levels in their deep-water habitat, and were morphologically most similar. However, they differed in important head traits (e.g., eye and mouth size) related to their different diet specializations. The small-sized PB-morph had a paedomorphic appearance with a blunt head shape, large eyes, and a deep body shape adapted to their profundal lifestyle feeding on submerged benthos from soft, deep-water sediments. The PP-morph had a robust head, large mouth with numerous teeth, and an elongated body shape strongly related to their piscivorous behavior. The littoral spawning omnivore morph (LO-morph) predominantly utilizes the shallow benthic-pelagic habitat and food resources. Compared to the deep-water morphs, the LO-morph had smaller head relative to body size. The LO-morph exhibited traits typical for both shallow-water benthic feeding (e.g., large body depths and small eyes) and planktivorous feeding in the pelagic habitat (e.g., streamlined body shape and small mouth). The development of morphological differences within the same deep-water habitat for the PB- and PP-morphs highlights the potential of biotic factors and ecological interactions to promote further divergence in the evolution of polymorphism in a tentative incipient speciation process. The diversity of deep-water charr in this study represents a novelty in the Arctic charr polymorphism as a truly deep-water piscivore morph has to our knowledge not been described elsewhere.

Taxonomy and life history of the Acropora-eating flatworm Amakusaplana acroporae nov. sp. (Polycladida: Prosthiostomidae)

NASA Astrophysics Data System (ADS)

Rawlinson, K. A.; Gillis, J. A.; Billings, R. E.; Borneman, E. H.

2011-09-01

Efforts to culture and conserve acroporid corals in aquaria have led to the discovery of a corallivorous polyclad flatworm (known as AEFW - Acropora-eating flatworm), which, if not removed, can eat entire colonies. Live observations of the AEFW, whole mounts, serial histological sections and comparison of 28S rDNA sequences with other polyclads reveal that this is a new species belonging to the family Prosthiostomidae Lang, 1884 and previously monospecific genus Amakusaplana (Kato 1938). Amakusaplana acroporae is distinguished from Amakusaplana ohshimai by a different arrangement and number of eyes, a large seminal vesicle and dorsoventrally compressed shell gland pouch. Typical of the genus, A. acroporae, lacks a ventral sucker and has a small notch at the midline of the anterior margin. Nematocysts and a Symbiodinium sp. of dinoflagellate from the coral are abundantly distributed in the gut and parenchyma. Individual adults lay multiple egg batches on the coral skeleton, each egg batch has 20-26 egg capsules, and each capsule contains between 3-7 embryos. Embryonic development takes approximately 21 days, during which time characteristics of a pelagic life stage (lobes and ciliary tufts) develop but are lost before hatching. The hatchling is capable of swimming but settles to the benthos quickly, and no zooxanthellae were observed in the animal at this stage. We suggest that intracapsular metamorphosis limits the dispersal potential of hatchlings and promotes recruitment of offspring into the natal habitat. The evolutionary and ecological significance of retaining lobes and ciliary tufts in the embryo are discussed. Camouflage, high fecundity and possible dispersal dimorphisms probably explain how Amakusaplana acroporae can cause Acropora sp. mortality in aquaria where natural predators may be absent.

Morphometric and ultrastructural comparison of the olfactory system in elasmobranchs: the significance of structure-function relationships based on phylogeny and ecology.

PubMed

Schluessel, Vera; Bennett, Michael B; Bleckmann, Horst; Blomberg, Simon; Collin, Shaun P

2008-11-01

This study investigated the relationship between olfactory morphology, habitat occupancy, and lifestyle in 21 elasmobranch species in a phylogenetic context. Four measures of olfactory capability, that is, the number of olfactory lamellae, the surface area of the olfactory epithelium, the mass of the olfactory bulb, and the mass of the olfactory rosette were compared between individual species and groups, comprised of species with similar habitat and/or lifestyle. Statistical analyses using generalized least squares phylogenetic regression revealed that bentho-pelagic sharks and rays possess significantly more olfactory lamellae and larger sensory epithelial surface areas than benthic species. There was no significant correlation between either olfactory bulb or rosette mass and habitat type. There was also no significant difference between the number of lamellae or the size of the sensory surface area in groups comprised of species with similar diets, that is, groups preying predominantly on crustaceans, cephalopods, echinoderms, polychaetes, molluscs, or teleosts. However, some groups had significantly larger olfactory bulb or rosette masses than others. There was little evidence to support a correlation between phylogeny and morphology, indicating that differences in olfactory capabilities are the result of functional rather than phylogenetic adaptations. All olfactory epithelia exhibited microvilli and cilia, with microvilli in both nonsensory and sensory areas, and cilia only in sensory areas. Cilia over the sensory epithelia originated from supporting cells. In contrast to teleosts, which possess ciliated and microvillous olfactory receptor types, no ciliated olfactory receptor cells were observed. This is the first comprehensive study comparing olfactory morphology to several aspects of elasmobranch ecology in a phylogenetic context.

Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

PubMed

Walsh, Kevin; Haggerty, J Matthew; Doane, Michael P; Hansen, John J; Morris, Megan M; Moreira, Ana Paula B; de Oliveira, Louisi; Leomil, Luciana; Garcia, Gizele D; Thompson, Fabiano; Dinsdale, Elizabeth A

2017-01-01

As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1) the coral Mussismilia braziliensis , (2) fleshy macroalgae ( Stypopodium , Dictota and Canistrocarpus ), (3) turf algae, and (4) the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific "aura-biome". The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria , Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

Aura-biomes are present in the water layer above coral reef benthic macro-organisms

PubMed Central

Haggerty, J. Matthew; Doane, Michael P.; Hansen, John J.; Morris, Megan M.; Moreira, Ana Paula B.; de Oliveira, Louisi; Leomil, Luciana; Garcia, Gizele D.; Thompson, Fabiano; Dinsdale, Elizabeth A.

2017-01-01

As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1) the coral Mussismilia braziliensis, (2) fleshy macroalgae (Stypopodium, Dictota and Canistrocarpus), (3) turf algae, and (4) the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific “aura-biome”. The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria, Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms. PMID:28828261

An evaluation of intertidal feeding habitats from a shorebird perspective: Towards relevant comparisons between temperate and tropical mudflats

NASA Astrophysics Data System (ADS)

Piersma, Theunis; de Goeij, Petra; Tulp, Ingrid

Macrozoobenthic communities of intertidal soft sediments are reviewed worldwide from the perspective of a mollusc-eating shorebird species. Based on 19 sites, total biomass figures varied between 5 and 80 g AFDM per m 2 (average 24 g AFDM per m 2); no latitudinal trends are apparent. The contribution made by bivalves and gastropods varies between 1% and 99%, north-temperate intertidal flats having relatively more molluscs than tropical flats. Intertidal flats in the tropics contain a greater variety of taxa, with brachiopods in Indonesia and echinoderms in northwest Australia contributing significantly to biomass only there. Limits to the occurrence of avian predators of intertidal benthos are set by the harvestable fraction of the biomass on offer and the costs of living at a particular site. No systematic differences in the harvestable fraction of the total mollusc-biomass for a worldwide occurring shorebird species specializing on molluscs (knots Calidris canutus) were apparent between temperate and tropical intertidal areas, in spite of large differences in maintenance metabolism incurred by these birds. The harvestable fractions of bivalves in the two West African areas (Banc d'Arguin, Mauritania and Guinea-Bissau) tended to be high (23-84% of total biomass in six species), they were relatively low (2-52% in five species) in the temperate Wadden Sea and the tropical northwest Australian site. Harvestable biomass determines the intake rate of shorebirds, as illustrated by functional-response curves of knots feeding on two bivalves species. We argue that the collection of information on size-depth relationships along with faunal and biomass surveys at a range of sites is bound to greatly increase our understanding of both the biology of tidal-flat invertebrates and the resource base underpinning the spectacular seasonal migrations of shorebirds.

Functional group diversity is key to Southern Ocean benthic carbon pathways

PubMed Central

Sands, Chester J.

2017-01-01

High latitude benthos are globally important in terms of accumulation and storage of ocean carbon, and the feedback this is likely to have on regional warming. Understanding this ecosystem service is important but difficult because of complex taxonomic diversity, history and geography of benthic biomass. Using South Georgia as a model location (where the history and geography of benthic biology is relatively well studied) we investigated whether the composition of functional groups were critical to benthic accumulation, immobilization and burial pathway to sequestration–and also aid their study through simplification of identification. We reclassified [1], [2]) morphotype and carbon mass data to 13 functional groups, for each sample of 32 sites around the South Georgia continental shelf. We investigated the influence on carbon accumulation, immobilization and sequestration estimate by multiple factors including the compositions of functional groups. Functional groups showed high diversity within and between sites, and within and between habitat types. Carbon storage was not linked to a functional group in particular but accumulation and immobilization increased with the number of functional groups present and the presence of hard substrata. Functional groups were also important to carbon burial rate, which increased with the presence of mixed (hard and soft substrata). Functional groups showed high surrogacy for taxonomic composition and were useful for examining contrasting habitat categorization. Functional groups not only aid marine carbon storage investigation by reducing time and the need for team size and speciality, but also important to benthic carbon pathways per se. There is a distinct geography to seabed carbon storage; seabed boulder-fields are hotspots of carbon accumulation and immobilization, whilst the interface between such boulder-fields and sediments are key places for burial and sequestration. PMID:28654664

Biological oceanography of the red oceanic system

NASA Astrophysics Data System (ADS)

Theil, Hjalmar; Weikert, Horst

1. In 1977, 1979 and 1980-81, investigations were carried out which aimed at evaluating the potential risks from mining metalliferous muds precipating in the Atlantis II Deep of the central Red Sea. This environmental research was initiated by the Saudi Sudanese Red Sea Joint Commission in order to avoid any danger for the Red Sea ecosystem. The broad environmental research programme coherent studies in physical, chemical, biological, and geological oceanography as well as toxicological investigations in the oceanic and in reef zones. We summarise the results from our biological fiels studies in the open sea. 2. The biological investigations were concentrated on the area of the Atlantis II Deep. Benthos was sampled between 700-2000m. For comparison a few samples were also taken further north in the central Red Sea, and to east and west along the flanking deep terraces (500-1000m). Plankton studies covered the total water column above the Deep, and were extended along the axial through to north and south. 3. Benthos sampling was carried out using a heavy closing trawl, a large box grab (box size 50 × 50 cm), Van Veen grabs and traps; photographic surveys were made a phototrap and a photosled. Community respiration was measured with a ship-board method using grab subsamples. Nutrient concentrations, seston and phytoplankton standing stocks as well as in situ primary production were determined from hydrocast samples. Data on zooplankton and micronekton composition and standing stock were obtained from samples collected using different multiple opening-and-closing nets equipped with 100 μm, 300 μm, and 1000 μm mesh sizes. Daily and ontogenetical vertical migration patterns were studied by comparisons of data from midday and midnight tows. 4. Throughout the whole area the sediment is a pteropod ooze containing low contentrations of organic matter; measured organic carbon and nitrogen contents were 0.5 and 0.05% respectively, and chloroplastic pigment equivalents (chlorophyll and degradation products) were mostly at the lower limit of determination with up to 1.2 ng·cm -. Similarly the faunal components were rare. Meiofauna occured at abundances of up to 600 specimens·10 cm -2 (<0.3mg ash free dry weight · 10 cm -2), and macrofauna with up to 960 specimens · m -2. Photosled surveys showed low densities of megafauna of up to 20 specimens ·100m -2 (Thiel, 1979, 1981). The number of species is low compared with other regions, but some species seem to penetrate into greater depths in the Red Sea than in the Indian Ocean, possibly because of the high temperature of the Red Sea deep water. It reveals an interesting adaptation by these species to life in this low energy ecosystem (Thiel, 1979, 1980, in press; Klausewitz and Thiel, 1982). 5. Phytoplankton production was low in the euphotic zone overlying the Atlantis II Deep area and did not exceed 100 mg C · m -2 d -2 most of the year. Similarly, the levels of the standing stocks of seston, phytoplankton and zooplankton were typical of oligotrophic conditions. For all three categories, the average standing stocks were lowest in autum, but the maxima for each occured in different seasons. The seston stock was greatest in spring (March) amounting to 90 g dry weight · m -2 in the upper 75m higher by a factor of 2 than in autum. The phytoplankton stock was greatest in spring, and at the biggining of summer (June) when it reached about 17 mg chl a · m -2 in the euphotic zone, about 1.6 times the minimum autumn level. The zooplankton stock was greatest in winter (February) when it attained 15 g wet weight · m -2 or 51,000 individuals · m -2 in the total 1850m water colunm, values which were a factor of 3 and 1.6 higher respectively than in autum (Weikert, 1980a, 1981). The zooplankton stock which is poor in species exhibits a conspicuous planktocline below 100m, which roughly corresponds to the bottom of the euphotic zone. In winter, the planktocline shifts some tens of metres towards the sea surface. A secondary zooplankton maximum which overlaps with the deep scattering layer, is situated between 300-600m, and is confined to the oxygen minimum layer (Weikert, 1980a,b). Below about 1100m, the planktonic standing crop is extremely low, for example at about 1450m the abundance of the 300 μm net plankton was <0.1 mg wet weight · 100 m -3 with only 0.4 specimens · 100 m -3. The profiles of zooplankton abundance and biomass are paralled by the profile of diversity which is greatly reduced in the subsurface zooplankton communities. These findings were repeated both from different seasons and from other sites along the deep graben (Weikert, 1980a: Beckmann, 1984); all together they depict an extreme example of the peculiar bathymetric distribution of zooplankton typical of other partially land-locked seas (Weikert, 1982). No diel vertical migrations were observed below 1100m. All organic matter must be transported to greater depths and to the bottom in the form of sinking particles. However, the quantities of organic material which sink to such depths will be small, because decomposition rates can be expected much higher than normal because of the high uniform temperatures (21.6°C) of the deep water (Weikert, 1982). 6. Respiration measurements and the determinations of electron transport system activity were conducted on small, undisturbed sediment samples. The data can be evaluated by comparison with results obtained from the Arctic and the Atlantic Oceans employing exactly the same methods. In the Red Sea, respiration and ETS activity were found to be high but standing stocks and biomasses were low; the reverse was observed in the Arctic and the Atlantic. We believe that this difference in the ratio of respiration to biomass is determined by the great contrasts in the temperatures of the environments studied: Arctic -1.5°C, Atlantic 2°C, Red Sea 21.5°C. Independent of the species' adaptations to their environment this temperature influence will apply to all the living components of the ecosystem. Hence for Red Sea organisms maintenance costs are comparatively high, which greatly reduces their production potential. 7. Thus the oceanic ecosystem of the Red Sea can be summarised as follows: Primary production is low throughout most of the year and throughout most of the entire basin, and consequently so is secondary production (zooplankton). In subsurface waters, high maintenance costs reduces energy for investments in growth and reproduction. In addition degradation of organic matter is so fast in the upper layers that the standing stock in the intermediate layers is reduced and particle transport to greater depth in the central graben greatly restricted. The low abundance and biomass of the deep-sea plankton and benthos in the Red Sea is readily explained by the low availability of food and the high metabolic demands created by the unique high in situ temperature.

Changes in Benthic Biota between Mountain and Urban Streams

NASA Astrophysics Data System (ADS)

Sato, H.; Iijima, A.

2016-12-01

It is well known that the benthic biota in the river ecosystem changes drastically between the mountain and urban streams. However, there are few studies demonstrating the changes in biota by using quantitative techniques. In this study, field research on benthic species (mainly aquatic insects) was carried out at 6 different sites in the Kanna River in Japan. After that, we compared the biota quantitatively by using an EPT (Ephemeroptera, Plecoptera, and Trichoptera) index and a pollution index (Pantle-Buck Method). Moreover, we applied a cluster analysis to determine the statistical difference in the benthic biota among the sites. The monitoring stations (St.1-St.6 in order from the upper stream) were placed in the reaches of the Kanna River that is one of the headstreams flowing into the Tone River (fig.1-a). In those monitoring stations, St.1-3 are located in the mountain area, and St.4-6 are in the urban area. Field research was carried out every other month during February 2012 to January 2013 by a Beck-Tsuda β method. In total, we identified 7879 benthos of 153 species (fig.1-b). The EPT index tended to decrease toward the lower reaches (fig.1-c). Moreover, there were significant changes in the composition of EPT species between the mountain (St.1-3) and urban (St.4-6) area. In particular, Plecoptera species which has no pollution tolerance decreased drastically in the urban stream. The values of pollution index tended to increase toward the lower reaches (fig.1-d). In fact, the lower reaches of the Kanna River has a large population who has insufficient sewage treatment system. This is consistent with the changes in the EPT species. Cluster analysis demonstrated that the benthic biota in the Kanna River has been divided between St.3 and 4. Consequently, the water contamination in the urban stream is supposed to be the main cause of significant changes in benthic biota in the Kanna River's ecosystem.

Potential effects of temperature on the benthic infaunal community on the southeastern Bering Sea shelf: Possible impacts of climate change

NASA Astrophysics Data System (ADS)

Coyle, K. O.; Konar, B.; Blanchard, A.; Highsmith, R. C.; Carroll, J.; Carroll, M.; Denisenko, S. G.; Sirenko, B. I.

2007-11-01

In the late 1950s, Soviet researchers collected benthic infaunal samples from the southeastern Bering Sea shelf. Approximately 17 years later, researchers at University of Alaska Fairbanks also sampled the region to assess infaunal biomass and abundance. Here, the two data sets were examined to document patterns and reveal any consistent differences in infaunal biomass among major feeding groups between the two time periods. No significant differences in the geometric mean biomass of all taxa pooled were indicated between the two study periods (1958-1959=49.1 g m -2; 1975-1976=60.8 g m -2; P=0.14); however, significant differences were observed for specific functional groups, namely carnivores, omnivores and surface detritivores. Of the 64 families identified from both data sets from all functional groups, 21 showed statistically significant ( P⩽0.05) differences in mean biomass. Of the 21 families showing significant differences, 19 (91%) of the families had higher mean biomass in the 1975-1976 data set. The above differences suggest a trend toward higher overall infaunal biomass for specific functional groups during mid 1970s compared with the late 1950s. Temperature measurements and literature data indicate that the mid-1970s was an unusually cold period relative to the period before and after, suggesting a mechanistic link between temperature changes and infaunal biomass. Food-web relationships and ecosystem dynamics in the southeastern Bering Sea indicate that during cold periods, infaunal biomass will be elevated relative to warm periods due to elevated carbon flux to the benthos and exclusion of benthic predators on infaunal invertebrates by the cold bottom water on the shelf. As long-term observations of temperature and sea-ice cover indicate a secular warming trend on the Bering Sea shelf, the potential changes in food-web relationships could markedly alter trophic structure and energy flow to apex consumers, potentially impacting the commercial, tourist and subsistence economies.

The Role of Terrestrial Inputs of Organic Matter in Arctic Lagoons: Comparative Studies from Open-Water and Ice-Covered Periods

NASA Astrophysics Data System (ADS)

Dunton, K. H.; McClelland, J. W.; Connelly, T.; Linn, S.; Khosh, M.

2012-12-01

Coastal ecosystems of the Arctic receive extraordinarily large quantities of terrestrial organic matter through river discharge and shoreline erosion. This organic matter, both in dissolved and particulate form, may provide an important carbon and energy subsidy that supports and maintains heterotrophic activity and food webs in coastal waters, especially in the lagoons. Recent food web studies using stable isotopes confirm the significant assimilation of terrestrial organic matter, based on the depletion in both 13C and 15N content of invertebrate and vertebrate consumers collected in eastern Beaufort Sea lagoons vs. offshore waters. Our current work specifically focuses on a set of 12 field sites along the eastern Alaskan Beaufort Sea coast, from Barter Island to Demarcation Bay. To examine linkages between biological communities and organic matter inputs from land, we compared sites ranging from lagoons to open coastal systems that receive differing amounts of freshwater runoff and also differ markedly in their exchange characteristics with shelf waters. Our temporal and spatial effort included field sampling during the ice covered period in a number of lagoons characterized by differences in their exchange characteristics with the nearshore shelf. Our preliminary chemical and biological measurements, the first of their kind in arctic coastal lagoons, reveal that lagoon benthos can become hypersaline (43) and net heterotrophic (values to 30% oxygen saturation) during winter, before rebounding during the period of ice break-up to net autotrophic (>100% saturation) under continued hypersaline conditions. Measurements of water and sediment chemistry, benthic and water column community characteristics, and natural abundance isotopic tracers promise to reveal the dynamic nature of these productive lagoon ecosystems under different hydrologic conditions. The possible role of terrestrially derived carbon to arctic estuarine food webs is especially important in view of the current warming trend in the arctic environment and the role of advective processes that transport carbon along the nearshore shelf.

Trophodynamics of a deep-sea demersal fish assemblage from the bathyal eastern Ionian Sea (Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Madurell, T.; Cartes, J. E.

2005-11-01

Daily food consumption of the eight dominant demersal fish species of the bathyal eastern Ionian Sea were determined from field data on four seasonal cruises (April 1999, July August 1999, November 1999 and February 2000). Daily ration (DR) estimates ranged from 0.198 to 4.273% WW/WW. Overall, DR estimates were independent of the model used, and they were comparable to the daily consumption of other deep-sea fauna (e.g. fish and crustaceans). Both sharks studied ( Galeus melastomus and Etmopterus spinax) exhibited the highest values of DRs, together with the macrourid Coelorhynchus coelorhynchus in August. Among osteichthyes, DR estimates were related (in a multi-linear regression model) to the nature of their diet (i.e. their trophic level deduced from δ15N isotopic composition, the mean number of prey and trophic diversity). Thus, species feeding at a lower trophic level, ingesting a large number of prey items and with a very diversified diet had higher DR than species from higher trophic level and feeding fewer prey items. By season, the DR of species feeding mainly on mesopelagic prey ( Hoplostethus mediterraneus and Helicolenus dactylopterus) were higher in summer, while DR for benthos/suprabenthos feeders (i.e. C. coelorhynchus and Nezumia sclerorhynchus) were higher in spring. Higher food consumption coincides with maximum food availability, both among mesopelagic feeders (higher availability of euphausiids, Pasiphaea sivado and Sergestes arcticus in summer) and among Macrouridae (higher suprabenthos densities in spring). In a tentative estimate the energy intake deduced from diet (i.e. mean energy value of food ingested) was constant in all seasons for each species studied. Results for the energy intake also indicate higher energy intake in the diet of mesopelagic feeders than in the diet of benthic feeders. Overall results are discussed in relation to the deep-sea ecosystem structure and functioning.

Measures of net oxidant concentration in seawater

NASA Astrophysics Data System (ADS)

Jackson, George A.; Williams, Peter M.

1988-02-01

Dissolved oxygen deficits in the ocean have been used as a measure of the organic matter oxidized in a volume of water. Such organic matter is usually assumed to be predominantly settled particles. Using dissolved oxygen concentration in this way has two problems: first, it does not differentiate between oxidant consumed by the pool of dissolved organic matter present near the ocean surface and oxidant consumed by organic matter contained by falling particles; second, it does not account for other oxidant sources, such as nitrate, which can be as important to organic matter decay as oxygen in low-oxygen water, such as off Peru or in the Southern California submarine basins. New parameters provide better measures of the net oxidant concentration in a water parcel. One such, NetOx, is changed only by gaseous exchange with the atmosphere, exchange with the benthos, or the production or consumption of sinking particles. A simplified version of NetOx, NetOx = [O2] + 1.25[NO3-] - [TOC], where TOC (total organic carbon), the dissolved organic carbon (DOC) plus the suspended particulate organic carbon (POC), provides an index based on the usually dominant variables. Calculation of NetOx and a second property, NetOC ([O2] - [TOC]), for data from GEOSECS and ourselves in the Atlantic and Pacific oceans using property-property graphs show differences from those from oxygen deficits alone. Comparison of NetOx and NetOC concentrations at high and low latitudes of the Pacific Ocean shows the difference in surface water oxidant concentrations is even larger than the difference in oxygen concentration. Vertical particle fluxes off Peru calculated from NetOx gradients are much greater than those calculated from oxygen gradients. The potential value of NetOx and NetOC as parameters to understand particle fluxes implies that determination of TOC should be a routine part of hydrographic measurements.

OceanCubes: An Affordable Cabled Observatory System for Integrated Long-Term, High Frequency Biological, Chemical, and Physical Measurements for Understanding Coastal Ecosystems

NASA Astrophysics Data System (ADS)

Gallager, S. M.

2016-02-01

Understanding how coastal ocean processes are forcing and/or responding to ecosystem change is a central premise in current oceanographic research and monitoring. A distributed, high capacity observing capability is necessary to address biological processes requiring high frequency observations on short ( turbulence, internal waves), moderate (typhoons), and decadal time scales (e.g., NAO, El Nino-SO, PDO). The current belief that ocean observing systems need to be expensive, large, difficult to deploy and limited in capacity was tested by developing OceanCubes, an end-to-end cabled observational system with real-time telemetry, state-of-the-art sensor packages, high level of expandability, and diver maintained to reduce operating costs. A modular approach allows for a scalable system that can grow over time to accommodate budgets. The control volume design allows for measurement of material flux and energy from the water column to the benthos at a rate of s-1. The sensor package is connected by electro-optical cable to shore providing the capability for internet-based teleoperation by scientists world-wide. The central node provides underwater mateable connections for > 22 serial and Ethernet-based sensors (CTD, four ADCPs, chlorophyll and CDOM fluorescence, O2, nitrate, pCO2, pH, a bio-optical package, a Continuous Plankton Imaging and Classification Sensor (CPICS) for mesoplankton, a pan and tilt webcam, and two stereo cameras to observe and track fish communities. ADCPs and temperature strings mark the corners of the 162,000 m3 control volume. Disparate data streams are remotely archived, correlated, and analyzed while plankton and fish are identified using state-of-the-art machine vision and learning techniques. Two OceanCubes have been installed in Japan (Okinawa and Oshima Island, Tokyo) and have survived several typhoon seasons. Two additional systems are planned for either side of the Panamanian Isthmus. Results of these systems will be discussed.

Qcritical as a Geomorphically and Biologically Relevant Flow Threshold for Stormwater Management and Catchment-scale Stream Restoration

NASA Astrophysics Data System (ADS)

Hawley, R. J.; Vietz, G. J.; Wooten, M. S.

2016-12-01

The threshold discharge that initiates streambed mobilization (Qcritical) is one of the most mechanistically-important flows for geomorphic function and biological integrity in stream ecosystems. Increased frequency and duration of flows that exceed Qcritical are a dominant driver of geomorphic instability and excess benthic disturbance in urban/suburban streams (i.e. the urban disturbance regime). Qcritical frequency also corresponds to measures of stream integrity in reference streams, with both geomorphic stability and biological indices significantly correlated to time since a Qcritical event in one 7-y study. Indeed, reference site macroinvertebrate communities during years with atypically frequent Qcritical events were more similar to sites draining watersheds with 30% imperviousness than to reference site communities of more typical rainfall years. Despite its biophysical relevance to stream ecosystems, Qcritical is one of the most overlooked and misunderstood flows in the stormwater management and stream restoration fields. Regional stormwater policies and stream restoration design guidance are often based on the misplaced assumption that streambed erosion does not occur at sub-bankfull events (often assumed to correspond to the 1-y recurrence discharge). Using an international database of nearly 200 sites we show that Qcritical varies by several orders of magnitude as a function of streambed particle size. Qcritical in sand-dominated streams is likely to be orders of magnitude less than the 1-yr discharge, whereas Qcritical in cobble/boulder dominated streams could be much larger than the 1-yr discharge, implying that stormwater/restoration policies focused on the 1-yr event could lack efficacy in many stream settings. Qcritical is a geomorphically- and biologically-relevant discharge threshold when developing stormwater management policies intended to protect streams from excess erosion, designing watershed-scale restoration efforts to restore a more natural disturbance regime, or reconstructing stream reaches designed to restore sediment continuity. Incorporation of Qcritical into such restoration and management efforts ensures that designs are actually tailored to the mechanisms that drive channel erosion and disturbance to the benthos.

Biology of the invasive ascidian Ascidiella aspersa in its native habitat: Reproductive patterns and parasite load

NASA Astrophysics Data System (ADS)

Lynch, Sharon A.; Darmody, Grainne; O'Dwyer, Katie; Gallagher, Mary Catherine; Nolan, Sinead; McAllen, Rob; Culloty, Sarah C.

2016-11-01

The European sea squirt Ascidiella aspersa is a solitary tunicate native to the northeastern Atlantic, commonly found in shallow and sheltered marine ecosystems where it is capable of forming large clumps and outcompeting other invertebrate fauna at settlement. To date, there have been relatively few studies looking at the reproductive biology and health status of this invasive species. Between 2006 and 2010 sampling of a native population took place to investigate gametogenesis and reproductive cycle and to determine the impact of settlement depth on reproduction. In addition, parasite diversity and impact was assessed. A staging system to assess reproductive development was determined. The study highlighted that from year to year the tunicate could change its reproductive strategy from single sex to hermaphrodite, with spawning possible throughout the year. Depth did not impact on sex determination, however, gonad maturation and spawning occurred earlier in individuals in deeper waters compared to shallow depth and it also occurred later in A. aspersa at sites further away from the open sea. Four significant parasite groups including eugregarines, ciliates, trematodes and turbellarians were detected and prevalence of parasite infections increased in A. aspersa at sites with a reduced water flow rate. This study demonstrates the high biotic potential of this ascidian bioinvader to have a negative impact on native fauna in an introduced ecosystem, due to its highly efficient reproductive and resource allocation strategies. Artificial structures such as mooring lines can harbour large aggregations of A. aspersa, however, these manmade habitats may facilitate the colonisation and establishment of this invasive species in the benthos. Additionally, the parasite communities that A. aspersa harbour may also exacerbate its negative impact, both ecologically and economically, in an introduced area by possibly leading to the emergence of new disease in native species i.e. pathogen spillover.

An examination of the factors influencing mercury and methylmercury particulate distributions, methylation and demethylation rates in laboratory-generated marine snow.

PubMed

Ortiz, Veronica L; Mason, Robert P; Ward, J Evan

2015-12-20

In the marine environment, settling particulates have been widely studied for their role as effective vertical transporters of nutrients and metals scavenged from the euphotic zone to the benthos. These particulates are composed of transparent exopolymers, plankton and bacterial cells, detritus and organic matter, and form various size fractions from colloids (<0.2μm) to aggregates, and finally marine snow (>300 μm). As marine snow forms in the water column, anoxic layers form around and within the aggregation potentially creating a prime environment for the methylation of mercury (Hg), which occurs primarily in low oxygen environments. To examine this process, marine aggregates were produced from sieved estuarine seawater (100 μm) in 1-L glass bottles spiked with stable isotope enriched methylmercury (CH 3 199 Hg) and inorganic mercury ( 200 Hg(II)) at 18° C using a roller-table. After the rolling period, different particle-size fractions were collected and analyzed, including: visible marine snow (>300μm), particulates 8 to 300 μm, and particulates 0.2 to 8μm. Particulate analysis indicated higher incorporation of both forms of Hg into marine snow compared to unrolled treatments, with greater incorporation of 200 Hg(II) than CH 3 199 Hg. In addition, inorganic Hg was methylated and CH 3 Hg was demethylated in the larger particulate fractions (>8μm). Methylation and demethylation rates were assessed based on changes in isotopic composition of Hg(II) and CH 3 Hg, and found to be comparable to methylation rates found in sediments. These results indicate that net Hg methylation can occur in marine snow and smaller aggregates in oxic coastal waters, and that this net formation of CH 3 Hg may be an important source of CH 3 Hg in both coastal and open ocean surface environments.

Contribution of phytoplankton and benthic microalgae to inner shelf sediments of the north-central Gulf of Mexico

NASA Astrophysics Data System (ADS)

Grippo, M. A.; Fleeger, J. W.; Rabalais, N. N.; Condrey, R.; Carman, K. R.

2010-03-01

Marine sediment may contain both settled phytoplankton and benthic microalgae (BMA). In river-dominated, shallow continental shelf systems, spatial, and temporal heterogeneity in sediment type and water-column characteristics (e.g., turbidity and primary productivity) may promote spatial variation in the relative contribution of these two sources to the sediment organic matter pool available to benthic consumers. Here we use photosynthetic pigment analysis and microscopic examination of sediment microalgae to investigate how the biomass, composition, and degradation state of sediment-associated microalgae vary along the Louisiana (USA) inner shelf, a region strongly influenced by the Mississippi River. Three sandy shoals and surrounding muddy sediments with depths ranging from 4 to 20 m were sampled in April, August, and October 2007. Pigment composition suggested that sediment microalgae were primarily diatoms at all locations. We found no significant differences in sediment chlorophyll a concentrations (8-77 mg m -2) at the shoal and off-shoal stations. Epipelic pennate diatoms (considered indicative of BMA) made up a significantly greater proportion of sediment diatoms at sandy (50-98%) compared to more silty off-shoal stations (16-56%). The percentage of centric diatoms (indicators of settled phytoplankton) in the sediment was highest in August. Sediment total pheopigment concentrations on sandy stations (<20 mg m -2) were significantly lower than concentrations at nearby muddy stations (>40 mg m -2), suggesting differences in sediment microalgal degradation state. These observations suggest that BMA predominate in shallow sandy sediments and that phytodetritus predominates at muddy stations. Our results also suggest that the relative proportion of phytodetritus in the benthos was highest where phytoplankton biomass in the overlying water was greatest, independent of sediment type. The high biomass of BMA found on shoals suggests that benthic primary production on sandy sediments represents a potentially significant local source of sediment microalgal carbon that may be utilized by benthic consumers in continental shelf food webs.

Polycyclic aromatic and aliphatic hydrocarbons in Chukchi Sea biota and sediments and their toxicological response in the Arctic cod, Boreogadus saida

NASA Astrophysics Data System (ADS)

Harvey, H. Rodger; Taylor, Karen A.; Pie, Hannah V.; Mitchelmore, Carys L.

2014-04-01

As part of the Chukchi Sea Offshore Monitoring in Drilling Area-Chemical and Benthos (COMIDA CAB) project, we determined the distribution and concentrations of aliphatic n-alkanes and polycyclic aromatic hydrocarbons (PAHs) in surface sediments (0-1 cm) among 52 sites across the Chukchi Sea and in muscle tissues of the benthic Northern whelk, Neptunea heros, collected opportunistically. In addition, downcore profiles of contaminants were determined at three targeted sites to establish historic patterns. Baseline responses of PAH exposure and its potential toxicological effects were examined in the common Arctic cod, Boreogadus saida, through measures of cytochrome P4501A/ ethoxyresorufin O-deethylase (CYP1A/EROD), glutathione-S-transferase (GST), and Cu/Zn superoxide dismutase (SOD) activity in liver tissue. The total concentration of PAHs in surface sediments throughout the study area, including parent and alkyl-homologs, were very low (<1600 ng g-1 dry wt) except for a single station, where values were 2-20-fold greater than at other baseline sites (2956 ng g-1 dry wt). Alkyl-substituted PAHs were the dominant form in all surface (54-93%) and subsurface sediments (50-81% of the total), with a general decrease in total PAH concentrations observed downcore. In biota, larger Neptunea showed lower total concentrations of PAHs in foot muscles (4.5-10.7 ng g-1 wet wt) compared to smaller animals; yet aliphatic n-alkane (C19-C33) concentrations (0.655-5.20 μg g-1 wet wt) increased in larger organisms with distributions dominated by long-chain (C23-C33) hydrocarbons. In B. saida, CYP1A1, GST, and SOD enzyme levels were comparable to baseline levels previously reported in other pristine systems. Of the three assays, only SOD had a significant correlation between gene expression and enzyme activity.

Why is the South Orkney Island shelf (the world's first high seas marine protected area) a carbon immobilization hotspot?

PubMed

Barnes, David K A; Ireland, Louise; Hogg, Oliver T; Morley, Simon; Enderlein, Peter; Sands, Chester J

2016-03-01

The Southern Ocean archipelago, the South Orkney Islands (SOI), became the world's first entirely high seas marine protected area (MPA) in 2010. The SOI continental shelf (~44 000 km(2) ), was less than half covered by grounded ice sheet during glaciations, is biologically rich and a key area of both sea surface warming and sea-ice losses. Little was known of the carbon cycle there, but recent work showed it was a very important site of carbon immobilization (net annual carbon accumulation) by benthos, one of the few demonstrable negative feedbacks to climate change. Carbon immobilization by SOI bryozoans was higher, per species, unit area and ice-free day, than anywhere-else polar. Here, we investigate why carbon immobilization has been so high at SOI, and whether this is due to high density, longevity or high annual production in six study species of bryozoans (benthic suspension feeders). We compared benthic carbon immobilization across major regions around West Antarctica with sea-ice and primary production, from remotely sensed and directly sampled sources. Lowest carbon immobilization was at the northernmost study regions (South Georgia) and southernmost Amundsen Sea. However, data standardized for age and density showed that only SOI was anomalous (high). High immobilization at SOI was due to very high annual production of bryozoans (rather than high densities or longevity), which were 2x, 3x and 5x higher than on the Bellingshausen, South Georgia and Amundsen shelves, respectively. We found that carbon immobilization correlated to the duration (but not peak or integrated biomass) of phytoplankton blooms, both in directly sampled, local scale data and across regions using remote-sensed data. The long bloom at SOI seems to drive considerable carbon immobilization, but sea-ice losses across West Antarctica mean that significant carbon sinks and negative feedbacks to climate change could also develop in the Bellingshausen and Amundsen seas. © 2015 John Wiley & Sons Ltd.

The Effects of Groundwater-associated Nutrients on Benthic Community Composition in Maunalua Bay, Hawaíi

NASA Astrophysics Data System (ADS)

La Valle, F. F.; Thomas, F. I. M.

2016-02-01

As populations grow and development efforts continue in coastal regions throughout the world, eutrophication is one of the leading issues surrounding coastal ecosystems. Currently, studies on subterranean groundwater discharge (SGD) are confirming that SGD can contain substantial nutrient concentrations due to agricultural activities, urbanization, leaky septic and sewer systems, and use of fertilizers. Thus, it is important for SGD with high nutrient concentrations to be monitored for its impact on coastal dynamics. Coral reef systems are especially sensitive to changes in nutrient concentrations which can change community composition by creating advantageous biochemical environments for specific algal species. Excess nutrients along with decreased herbivory have been attributed to phase shifts from coral dominated to algal dominated reefs. In this study we mapped algal cover and nutrient load with respect to the groundwater in two fringing reefs (Black Point and Wailupe) in Maunalua Bay, Oahu, Hawaíi. We established relationships between salinity and nutrient concentrations for the two sites by sampling synoptically on an onshore to offshore transect from the SGD seeps (n = 48 Black Point, n = 40 Wailupe, R2 > 0.965). The groundwater end members at the two sites have different nutrient signatures: concentrations at Black Point averaged 167.3 uM N+N (NO3- + NO2-) and 3.57 uM PO43-, while at Wailupe nutrient concentrations averaged 68.7 uM N+N and 1.96 uM PO43-. We used these relationships to calculate nutrient time series after deploying 23 autonomous salinity sensors for one month across the benthos at each site respectively. Benthic surveys taken over 2 seasons indicate that the algal composition and distribution relative to the groundwater sources differ at the two sites. Growth rates of some major macroalgal species also differ with distance from SGD source. Further studies on the biological effects of high SGD-associated nutrients on coastal systems are warranted.

Overview of integrative tools and methods in assessing ecological integrity in estuarine and coastal systems worldwide.

PubMed

Borja, Angel; Bricker, Suzanne B; Dauer, Daniel M; Demetriades, Nicolette T; Ferreira, João G; Forbes, Anthony T; Hutchings, Pat; Jia, Xiaoping; Kenchington, Richard; Carlos Marques, João; Zhu, Changbo

2008-09-01

In recent years, several sets of legislation worldwide (Oceans Act in USA, Australia or Canada; Water Framework Directive or Marine Strategy in Europe, National Water Act in South Africa, etc.) have been developed in order to address ecological quality or integrity, within estuarine and coastal systems. Most such legislation seeks to define quality in an integrative way, by using several biological elements, together with physico-chemical and pollution elements. Such an approach allows assessment of ecological status at the ecosystem level ('ecosystem approach' or 'holistic approach' methodologies), rather than at species level (e.g. mussel biomonitoring or Mussel Watch) or just at chemical level (i.e. quality objectives) alone. Increasing attention has been paid to the development of tools for different physico-chemical or biological (phytoplankton, zooplankton, benthos, algae, phanerogams, fishes) elements of the ecosystems. However, few methodologies integrate all the elements into a single evaluation of a water body. The need for such integrative tools to assess ecosystem quality is very important, both from a scientific and stakeholder point of view. Politicians and managers need information from simple and pragmatic, but scientifically sound methodologies, in order to show to society the evolution of a zone (estuary, coastal area, etc.), taking into account human pressures or recovery processes. These approaches include: (i) multidisciplinarity, inherent in the teams involved in their implementation; (ii) integration of biotic and abiotic factors; (iii) accurate and validated methods in determining ecological integrity; and (iv) adequate indicators to follow the evolution of the monitored ecosystems. While some countries increasingly use the establishment of marine parks to conserve marine biodiversity and ecological integrity, there is awareness (e.g. in Australia) that conservation and management of marine ecosystems cannot be restricted to Marine Protected Areas but must include areas outside such reserves. This contribution reviews the current situation of integrative ecological assessment worldwide, by presenting several examples from each of the continents: Africa, Asia, Australia, Europe and North America.

Life histories of microalgal species causing harmful blooms: Haploids, diploids and the relevance of benthic stages.

PubMed

Figueroa, Rosa Isabel; Estrada, Marta; Garcés, Esther

2018-03-01

In coastal and offshore waters, Harmful Algal Blooms (HABs) currently threaten the well-being of coastal countries. These events, which can be localized or involve wide-ranging areas, pose risks to human health, marine ecosystems, and economic resources, such as tourism, fisheries, and aquaculture. Dynamics of HABs vary from one site to another, depending on the hydrographic and ecological conditions. The challenge in investigating HABs is that they are caused by organisms from multiple algal classes, each with its own unique features, including different life histories. The complete algal life cycle has been determined in <1% of the described species, although elucidation of the life cycles of bloom-forming species is essential in developing preventative measures. The knowledge obtained thus far has confirmed the complexity of the algal life cycle, which is composed of discrete life stages whose morphology, ecological niche (plankton/benthos), function, and lifespan vary. The factors that trigger transitions between the different stages in nature are mostly unknown, but it is clear that an understanding of this process provides the key to effectively forecasting bloom recurrence, maintenance, and decline. Planktonic stages constitute an ephemeral phase of the life cycle of most species whereas resistant, benthic stages enable a species to withstand adverse conditions for prolonged periods, thus providing dormant reservoirs for eventual blooms and facilitating organismal dispersal. Here we review current knowledge of the life cycle strategies of major groups of HAB producers in marine and brackish waters. Rather than providing a comprehensive discussion, the objective was to highlight several of the research milestones that have changed our understanding of the plasticity and frequency of the different life cycle stages as well as the transitions between them. We also discuss the relevance of benthic and planktonic forms and their implications for HAB dynamics. Copyright © 2018. Published by Elsevier B.V.

Effects of salt pond restoration on benthic flux: Sediment as a source of nutrients to the water column

USGS Publications Warehouse

Topping, Brent R.; Kuwabara, James S.; Carter, James L.; Garrettt, Krista K.; Mruz, Eric; Piotter, Sarah; Takekawa, John Y.

2016-01-01

Understanding nutrient flux between the benthos and the overlying water (benthic flux) is critical to restoration of water quality and biological resources because it can represent a major source of nutrients to the water column. Extensive water management commenced in the San Francisco Bay, Beginning around 1850, San Francisco Bay wetlands were converted to salt ponds and mined extensively for more than a century. Long-term (decadal) salt pond restoration efforts began in 2003. A patented device for sampling porewater at varying depths, to calculate the gradient, was employed between 2010 and 2012. Within the former ponds, the benthic flux of soluble reactive phosphorus and that of dissolved ammonia were consistently positive (i.e., moving out of the sediment into the water column). The lack of measurable nitrate or nitrite concentration gradients across the sediment-water interface suggested negligible fluxes for dissolved nitrate and nitrite. The dominance of ammonia in the porewater indicated anoxic sediment conditions, even at only 1 cm depth, which is consistent with the observed, elevated sediment oxygen demand. Nearby openestuary sediments showed much lower benthic flux values for nutrients than the salt ponds under resortation. Allochthonous solute transport provides a nutrient advective flux for comparison to benthic flux. For ammonia, averaged for all sites and dates, benthic flux was about 80,000 kg/year, well above the advective flux range of −50 to 1500 kg/year, with much of the variability depending on the tidal cycle. By contrast, the average benthic flux of soluble reactive phosphorus was about 12,000 kg/year, of significant magnitude, but less than the advective flux range of 21,500 to 30,000 kg/year. These benthic flux estimates, based on solute diffusion across the sediment-water interface, reveal a significant nutrient source to the water column of the pond which stimulates algal blooms (often autotrophic). This benthic source may be augmented further by bioturbation, bioirrigation and episodic sediment resuspension events.

Climate change and Southern Ocean ecosystems I: how changes in physical habitats directly affect marine biota.

PubMed

Constable, Andrew J; Melbourne-Thomas, Jessica; Corney, Stuart P; Arrigo, Kevin R; Barbraud, Christophe; Barnes, David K A; Bindoff, Nathaniel L; Boyd, Philip W; Brandt, Angelika; Costa, Daniel P; Davidson, Andrew T; Ducklow, Hugh W; Emmerson, Louise; Fukuchi, Mitsuo; Gutt, Julian; Hindell, Mark A; Hofmann, Eileen E; Hosie, Graham W; Iida, Takahiro; Jacob, Sarah; Johnston, Nadine M; Kawaguchi, So; Kokubun, Nobuo; Koubbi, Philippe; Lea, Mary-Anne; Makhado, Azwianewi; Massom, Rob A; Meiners, Klaus; Meredith, Michael P; Murphy, Eugene J; Nicol, Stephen; Reid, Keith; Richerson, Kate; Riddle, Martin J; Rintoul, Stephen R; Smith, Walker O; Southwell, Colin; Stark, Jonathon S; Sumner, Michael; Swadling, Kerrie M; Takahashi, Kunio T; Trathan, Phil N; Welsford, Dirk C; Weimerskirch, Henri; Westwood, Karen J; Wienecke, Barbara C; Wolf-Gladrow, Dieter; Wright, Simon W; Xavier, Jose C; Ziegler, Philippe

2014-10-01

Antarctic and Southern Ocean (ASO) marine ecosystems have been changing for at least the last 30 years, including in response to increasing ocean temperatures and changes in the extent and seasonality of sea ice; the magnitude and direction of these changes differ between regions around Antarctica that could see populations of the same species changing differently in different regions. This article reviews current and expected changes in ASO physical habitats in response to climate change. It then reviews how these changes may impact the autecology of marine biota of this polar region: microbes, zooplankton, salps, Antarctic krill, fish, cephalopods, marine mammals, seabirds, and benthos. The general prognosis for ASO marine habitats is for an overall warming and freshening, strengthening of westerly winds, with a potential pole-ward movement of those winds and the frontal systems, and an increase in ocean eddy activity. Many habitat parameters will have regionally specific changes, particularly relating to sea ice characteristics and seasonal dynamics. Lower trophic levels are expected to move south as the ocean conditions in which they are currently found move pole-ward. For Antarctic krill and finfish, the latitudinal breadth of their range will depend on their tolerance of warming oceans and changes to productivity. Ocean acidification is a concern not only for calcifying organisms but also for crustaceans such as Antarctic krill; it is also likely to be the most important change in benthic habitats over the coming century. For marine mammals and birds, the expected changes primarily relate to their flexibility in moving to alternative locations for food and the energetic cost of longer or more complex foraging trips for those that are bound to breeding colonies. Few species are sufficiently well studied to make comprehensive species-specific vulnerability assessments possible. Priorities for future work are discussed. © 2014 John Wiley & Sons Ltd.

Ecosystem characteristics and processes facilitating persistent macrobenthic biomass hotspots and associated benthivory in the Pacific Arctic

NASA Astrophysics Data System (ADS)

Grebmeier, Jacqueline M.; Bluhm, Bodil A.; Cooper, Lee W.; Danielson, Seth L.; Arrigo, Kevin R.; Blanchard, Arny L.; Clarke, Janet T.; Day, Robert H.; Frey, Karen E.; Gradinger, Rolf R.; Kędra, Monika; Konar, Brenda; Kuletz, Kathy J.; Lee, Sang H.; Lovvorn, James R.; Norcross, Brenda L.; Okkonen, Stephen R.

2015-08-01

The northern Bering and Chukchi Seas are areas in the Pacific Arctic characterized by high northward advection of Pacific Ocean water, with seasonal variability in sea ice cover, water mass characteristics, and benthic processes. In this review, we evaluate the biological and environmental factors that support communities of benthic prey on the continental shelves, with a focus on four macrofaunal biomass "hotspots." For the purpose of this study, we define hotspots as macrofaunal benthic communities with high biomass that support a corresponding ecological guild of benthivorous seabird and marine mammal populations. These four benthic hotspots are regions within the influence of the St. Lawrence Island Polynya (SLIP), the Chirikov Basin between St. Lawrence Island and Bering Strait (Chirikov), north of Bering Strait in the southeast Chukchi Sea (SECS), and in the northeast Chukchi Sea (NECS). Detailed benthic macrofaunal sampling indicates that these hotspot regions have been persistent over four decades of sampling due to annual reoccurrence of seasonally consistent, moderate-to-high water column production with significant export of carbon to the underlying sediments. We also evaluate the usage of the four benthic hotspot regions by benthic prey consumers to illuminate predator-prey connectivity. In the SLIP hotspot, spectacled eiders and walruses are important winter consumers of infaunal bivalves and polychaetes, along with epibenthic gastropods and crabs. In the Chirikov hotspot, gray whales have historically been the largest summer consumers of benthic macrofauna, primarily feeding on ampeliscid amphipods in the summer, but they are also foraging further northward in the SECS and NECS hotspots. Areas of concentrated walrus foraging occur in the SLIP hotspot in winter and early spring, the NECS hotspot in summer, and the SECS hotspot in fall. Bottom up forcing by hydrography and food supply to the benthos influences persistence and composition of benthic prey that then influences the distributions of benthivorous upper trophic level populations.

Hyperspectral remote sensing and long term monitoring reveal watershed-estuary ecosystem interactions

NASA Astrophysics Data System (ADS)

Hestir, E. L.; Schoellhamer, D. H.; Santos, M. J.; Greenberg, J. A.; Morgan-King, T.; Khanna, S.; Ustin, S.

2016-02-01

Estuarine ecosystems and their biogeochemical processes are extremely vulnerable to climate and environmental changes, and are threatened by sea level rise and upstream activities such as land use/land cover and hydrological changes. Despite the recognized threat to estuaries, most aspects of how change will affect estuaries are not well understood due to the poorly resolved understanding of the complex physical, chemical and biological processes and their interactions in estuarine systems. Remote sensing technologies such as high spectral resolution optical systems enable measurements of key environmental parameters needed to establish baseline conditions and improve modeling efforts. The San Francisco Bay-Delta is a highly modified estuary system in a state of ecological crisis due to the numerous threats to its sustainability. In this study, we used a combination of hyperspectral remote sensing and long-term in situ monitoring records to investigate how water clarity has been responding to extreme climatic events, anthropogenic watershed disturbances, and submerged aquatic vegetation (SAV) invasions. From the long-term turbidity monitoring record, we found that water clarity underwent significant increasing step changes associated with sediment depletion and El Nino-extreme run-off events. Hyperspectral remote sensing data revealed that invasive submerged aquatic pant species have facultative C3 and C4-like photosynthetic pathways that give them a competitive advantage under the changing water clarity conditions of the Bay-Delta system. We postulate that this adaptation facilitated the rapid expansion of SAV following the significant step changes in increasing water clarity caused by watershed disturbances and the 1982-1983 El Nino events. Using SAV maps from hyperspectral remote sensing, we estimate that SAV-water clarity feedbacks were responsible for 20-70% of the increasing water clarity trend in the Bay-Delta. Ongoing and future developments in airborne and global mapping hyperspectral satellite missions will enable full canopy-to-benthos characterization of estuarine ecosystems. When coupled with synoptic watershed measurements, these will improve understanding of watershed-estuary interactions for improved sustainable management.

Long-term patterns of benthic irradiance and kelp production in the central Beaufort sea reveal implications of warming for Arctic inner shelves

NASA Astrophysics Data System (ADS)

Bonsell, Christina; Dunton, Kenneth H.

2018-03-01

This study synthesizes a multidecadal dataset of annual growth of the Arctic endemic kelp Laminaria solidungula and corresponding measurements of in situ benthic irradiance from Stefansson Sound in the central Beaufort Sea. We incorporate long-term data on sea ice concentration (National Sea Ice Data Center) and wind (National Weather Service) to assess how ice extent and summer wind dynamics affect the benthic light environment and annual kelp production. We find evidence of significant changes in sea ice extent in Stefansson Sound, with an extension of the ice-free season by approximately 17 days since 1979. Although kelp elongation at 5-7 m depths varies significantly among sites and years (3.8-49.8 cm yr-1), there is no evidence for increased production with either earlier ice break-up or a longer summer ice-free period. This is explained by very low light transmittance to the benthos during the summer season (mean daily percent surface irradiance ± SD: 1.7 ± 3.6 to 4.5 ± 6.6, depending on depth, with light attenuation values ranging from 0.5 to 0.8 m-1), resulting in minimal potential for kelp production on most days. Additionally, on month-long timescales (35 days) in the ice-free summer, benthic light levels are negatively related to wind speed. The frequent, wind-driven resuspension of sediments following ice break-up significantly reduce light to the seabed, effectively nullifying the benefits of an increased ice-free season on annual kelp growth. Instead, benthic light and primary production may depend substantially on the 1-3 week period surrounding ice break-up when intermediate sea ice concentrations reduce wind-driven sediment resuspension. These results suggest that both benthic and water column primary production along the inner shelf of Arctic marginal seas may decrease, not increase, with reductions in sea ice extent.

Consequences of Increasing Hypoxic Disturbance on Benthic Communities and Ecosystem Functioning

PubMed Central

Villnäs, Anna; Norkko, Joanna; Lukkari, Kaarina; Hewitt, Judi; Norkko, Alf

2012-01-01

Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota) effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface) by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days) in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential), gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH4 + and dissolved Si. Although effluxes of PO4 3− were not altered significantly, changes were observed in sediment PO4 3− sorption capability. The duration of hypoxia (i.e. number of days of stress) explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the benthic habitat matters, and that the link between biodiversity and ecosystem function is likely to be affected by a range of factors in complex, natural environments. PMID:23091592

Biodiversity of Spongosorites coralliophaga (Stephens, 1915) on coral rubble at two contrasting cold-water coral reef settings

NASA Astrophysics Data System (ADS)

Kazanidis, Georgios; Henry, Lea-Anne; Roberts, J. Murray; Witte, Ursula F. M.

2016-03-01

Cold-water coral reefs (CWRs) in the northeast Atlantic harbor diverse sponge communities. Knowledge of deep-sea sponge ecology is limited and this leaves us with a fragmented understanding of the ecological roles that sponges play in CWR ecosystems. We present the first study of faunal biodiversity associated with the massive demosponge Spongosorites coralliophaga (Stephens, 1915) that typically colonizes coral debris fields of CWRs. Our study focused on the sessile fauna inhabiting sponges mixed with coral rubble at two contrasting settings in the northeast Atlantic: the shallow inshore (120-190 m water depth) Mingulay Reef Complex (MRC) and the deep offshore (500-1200 m) Logachev Mound (LM) coral province. MRC is dominated by the scleractinian Lophelia pertusa, while LM is dominated by L. pertusa and Madrepora oculata. Nine sponge-coral rubble associations were collected from MRC and four from LM. Measurements of abundance, species richness, diversity, evenness, dry biomass, and composition of sessile fauna on sponge and coral rubble microhabitats were undertaken. Differences in community composition between the two regions were mainly a response to changes in fauna with depth. Fauna composition was also different between sponge and coral rubble within each region. Infauna constituted a minor component of the sponge-associated fauna in MRC but had a higher contribution in LM. Sponge and coral rubble sessile fauna in both regions was mainly composed of cnidarians and molluscs, similarly to some previous studies. Sponges' outer surfaces at MRC were colonized by a species-rich community with high abundance and biomass suggesting that S. coralliophaga at MRC acts as a settlement surface for various organisms but such a role is not the case at LM. This difference in the role of S. coralliophaga as a biological structure is probably related to differences in fauna composition with depth, bottom current speed, and the quantity/quality of food supplied to the benthos.

Benthic metabolic feedbacks to carbonate chemistry on coral reefs:implications for ocean acidification

NASA Astrophysics Data System (ADS)

Price, N.; Rohwer, F. L.; Stuart, S. A.; Andersson, A.; Smith, J.

2012-12-01

The metabolic activity of resident organisms can cause spatio-temporal variability in carbonate chemistry within the benthic boundary layer, and thus potentially buffer the global impacts of ocean acidification. But, little is known about the capacity for particular species assemblages to contribute to natural daily variability in carbonate chemistry. We encapsulated replicate areas (~3m2) of reef across six Northern Line Islands in the central Pacific for 24 hrs to quantify feedbacks to carbonate chemistry within the benthic boundary layer from community metabolism. Underneath each 'tent', we quantified relative abundance and biomass of each species of corals and algae. We coupled high temporal resolution time series data on the natural diurnal variability in pH, dissolved oxygen, salinity, and temperature (using autonomous sensors) with resident organisms' net community calcification and productivity rates (using change in total dissolved carbon and total alkalinity over time) to examine feedbacks from reef metabolism to boundary layer carbonate chemistry. These reefs experienced large ranges in pH (> 0.2 amplitude) each day, similar to the magnitude of 'acidification' expected over the next century. Daily benthic pH, pCO2, and aragonite saturation state (Ωaragonite) were contrasted with seasonal threshold values estimated from open ocean climatological data extrapolated at each island to determine relative inter-island feedbacks. Diurnal amplitude in pH, pCO2, and Ωaragonite at each island was dependent upon the resident species assemblage of the benthos and was particularly reliant upon the biomass, productivity, and calcification rate of Halimeda. Net primary productivity of fleshy algae (algal turfs and Lobophora spp.) predominated on degraded, inhabited islands where net community calcification was negligible. In contrast, the chemistry over reefs on 'pristine', uninhabited islands was driven largely by net calcification of calcareous algae and stony corals. Knowledge about species specific physiological rates and relative abundances of key taxa whose metabolism significantly alters carbonate chemistry may give insight to the ability for a reef to buffer against or exacerbate ocean acidification.

Coral Reefs on the Edge? Carbon Chemistry on Inshore Reefs of the Great Barrier Reef

PubMed Central

Uthicke, Sven; Furnas, Miles; Lønborg, Christian

2014-01-01

While increasing atmospheric carbon dioxide (CO2) concentration alters global water chemistry (Ocean Acidification; OA), the degree of changes vary on local and regional spatial scales. Inshore fringing coral reefs of the Great Barrier Reef (GBR) are subjected to a variety of local pressures, and some sites may already be marginal habitats for corals. The spatial and temporal variation in directly measured parameters: Total Alkalinity (TA) and dissolved inorganic carbon (DIC) concentration, and derived parameters: partial pressure of CO2 (pCO2); pH and aragonite saturation state (Ωar) were measured at 14 inshore reefs over a two year period in the GBR region. Total Alkalinity varied between 2069 and 2364 µmol kg−1 and DIC concentrations ranged from 1846 to 2099 µmol kg−1. This resulted in pCO2 concentrations from 340 to 554 µatm, with higher values during the wet seasons and pCO2 on inshore reefs distinctly above atmospheric values. However, due to temperature effects, Ωar was not further reduced in the wet season. Aragonite saturation on inshore reefs was consistently lower and pCO2 higher than on GBR reefs further offshore. Thermodynamic effects contribute to this, and anthropogenic runoff may also contribute by altering productivity (P), respiration (R) and P/R ratios. Compared to surveys 18 and 30 years ago, pCO2 on GBR mid- and outer-shelf reefs has risen at the same rate as atmospheric values (∼1.7 µatm yr−1) over 30 years. By contrast, values on inshore reefs have increased at 2.5 to 3 times higher rates. Thus, pCO2 levels on inshore reefs have disproportionately increased compared to atmospheric levels. Our study suggests that inshore GBR reefs are more vulnerable to OA and have less buffering capacity compared to offshore reefs. This may be caused by anthropogenically induced trophic changes in the water column and benthos of inshore reefs subjected to land runoff. PMID:25295864

Fear and loathing in the benthos: Responses of aquatic insect larvae to the pesticide imidacloprid in the presence of chemical signals of predation risk.

PubMed

Pestana, João L T; Loureiro, Susana; Baird, Donald J; Soares, Amadeu M V M

2009-06-28

The influence of interactions between pesticide exposure and perceived predation risk on the lethal and sub-lethal responses of two aquatic insects was investigated using the pesticide imidacloprid, and a combination of predator-release kairomones from trout and alarm substances from conspecifics. Laboratory experiments examined feeding and respiration rates of the caddisfly Sericostoma vittatum as well as the growth, emergence and respiration rates of the midge Chironomus riparius, exposed to sub-lethal concentrations of imidacloprid. The effects of the two stressors on burrowing behaviour of both species were also assessed. The results show significant effects of environmentally relevant concentrations of imidacloprid on all endpoints studied. Perceived predation risk also elicited sub-lethal effects in C. riparius and S. vittatum, the latter species being less responsive to predation cues. The effects of simultaneous exposure to both types of stressors were assessed using two different approaches: analysis of variance and conceptual models [concentration addition (CA) and independent action (IA)] normally used for the evaluation of contaminant mixture exposure. Both statistical approaches showed no significant interactions on responses in simultaneous exposures in the majority of parameters assessed with only a signification deviation from the reference CA and IA models being found for C. riparius respiration data contrary to the ANOVA results. Exposure to imidacloprid also compromised antipredator behavioural responses of both insect species, with potential negative consequences in terms of mortality from predation in the field. The results obtained demonstrate that natural and anthropogenic stressors can be treated within the same framework providing compatible data for modelling. For an improved interpretation of ecological effects it will be important to expand the mechanistic study of effects of combined exposure to pesticides and perceived predation risk by measuring different endpoints over a wider range of pesticide concentrations.

Climate warming and agricultural stressors interact to determine stream macroinvertebrate community dynamics.

PubMed

Piggott, Jeremy J; Townsend, Colin R; Matthaei, Christoph D

2015-05-01

Global climate change is likely to modify the ecological consequences of currently acting stressors, but potentially important interactions between climate warming and land-use related stressors remain largely unknown. Agriculture affects streams and rivers worldwide, including via nutrient enrichment and increased fine sediment input. We manipulated nutrients (simulating agricultural run-off) and deposited fine sediment (simulating agricultural erosion) (two levels each) and water temperature (eight levels, 0-6°C above ambient) simultaneously in 128 streamside mesocosms to determine the individual and combined effects of the three stressors on macroinvertebrate community dynamics (community composition and body size structure of benthic, drift and insect emergence assemblages). All three stressors had pervasive individual effects, but in combination often produced additive or antagonistic outcomes. Changes in benthic community composition showed a complex interplay among habitat quality (with or without sediment), resource availability (with or without nutrient enrichment) and the behavioural/physiological tendency to drift or emerge as temperature rose. The presence of sediment and raised temperature both resulted in a community of smaller organisms. Deposited fine sediment strongly increased the propensity to drift. Stressor effects were most prominent in the benthic assemblage, frequently reflected by opposite patterns in individuals quitting the benthos (in terms of their propensity to drift or emerge). Of particular importance is that community measures of stream health routinely used around the world (taxon richness, EPT richness and diversity) all showed complex three-way interactions, with either a consistently stronger temperature response or a reversal of its direction when one or both agricultural stressors were also in operation. The negative effects of added fine sediment, which were often stronger at raised temperatures, suggest that streams already impacted by high sediment loads may be further degraded under a warming climate. However, the degree to which this will occur may also depend on in-stream nutrient conditions. © 2015 John Wiley & Sons Ltd.

Benthic Oxygen Demand in Three Former Salt Ponds Adjacent to South San Francisco Bay, California

USGS Publications Warehouse

Topping, Brent R.; Kuwabara, James S.; Athearn, Nicole D.; Takekawa, John Y.; Parcheso, Francis; Henderson, Kathleen D.; Piotter, Sara

2009-01-01

Sampling trips were coordinated in the second half of 2008 to examine the interstitial water in the sediment and the overlying bottom waters of three shallow (average depth 2 meters). The water column at all deployment sites was monitored with dataloggers for ancillary water-quality parameters (including dissolved oxygen, salinity, specific conductance, temperature, and pH) to facilitate the interpretation of benthic-flux results. Calculated diffusive benthic flux of dissolved (0.2-micron filtered) oxygen was consistently negative (that is, drawn from the water column into the sediment) and ranged between -0.5 x 10-6 and -37 x 10-6 micromoles per square centimeter per second (site averages depicted in table 2). Assuming pond areas of 1.0, 1.4, and 2.3 square kilometers for ponds A16, A14, and A3W, respectively, this converts to an oxygen mass flux into the ponds' sediment ranging from -1 to -72 kilograms per day. Diffusive oxygen flux into the benthos (listed as negative) was lowest in pond A14 (-0.5 x 10-6 to -1.8 x 10-6 micromoles per square centimeter per second) compared with diffusive flux estimates for ponds A16 and A3W (site averages -26 x 10-6 to -35 x 10-6 and -34 x 10-6 to -37 x 10-6 micromoles per square centimeter per second, respectively). These initial diffusive-flux estimates are of the order of magnitude of those measured in the South Bay using core-incubation experiments (Topping and others, 2004), which include bioturbation and bioirrigation effects. Estimates of benthic oxygen demand reported herein, based on molecular diffusion, serve as conservative estimates of benthic flux because solute transport across the sediment-water interface can be enhanced by multidisciplinary processes including bioturbation, bioirrigation, ground-water advection, and wind resuspension (Kuwabara and others, 2009).

Coral reef monitoring in the Iles Eparses, Mozambique Channel (2011-2013)

NASA Astrophysics Data System (ADS)

Chabanet, P.; Bigot, L.; Nicet, J.-B.; Durville, P.; Massé, L.; Mulochau, T.; Russo, C.; Tessier, E.; Obura, D.

2016-04-01

Monitoring of coral reefs has become a major tool for understanding how they are changing, and for managing them in a context of increasing degradation of coastal ecosystems. The Global Coral Reef Monitoring Network (GCRMN) has near-global coverage, but there are few remote sites free of direct human impact that can serve as reference sites. This study provides baseline data for the French Iles Eparses in the Mozambique Channel, Western Indian Ocean (WIO), whose coral reefs are little known owing to their limited accessibility, and have been free from fishing pressure for over 20 years. Surveys of coral reef health and fish community structure were undertaken at four of the islands (Europa, Bassas da India, Juan de Nova and Glorieuses) in 2011-2013. Monitoring was conducted using standardized GCRMN methods for benthos and fish communities, at the highest taxonomic level. Benthic cover showed a latitudinal gradient, with higher coral cover and conversely lower algae cover (60% and 14% respectively) in the south of the Mozambique Channel. This could be due to the geomorphology of the islands, the latitudinal temperature gradient, and/or the history of chronic stress and bleaching events during the last decades. Fish also showed a latitudinal gradient with higher diversity in the north, in a center of diversity for the western Indian Ocean already recognized for corals. An exceptional biomass fish was recorded (approximately 3500 kg/ha excluding sharks, compared to a maximum of 1400 kg/ha elsewhere in the WIO). The presence of large predators and sharks in all the islands as well as the absence of fleshy benthic algae were indicators of the good health of the reef systems. Nevertheless, these islands are beginning to experience illegal fishing, particularly in the north of the Mozambique Channel, demonstrating their vulnerability to exploitation and the need to protect them as reference sites for coral reef studies, including of climate change impacts, for the region and globally.

The future of Arctic benthos: Expansion, invasion, and biodiversity

NASA Astrophysics Data System (ADS)

Renaud, Paul E.; Sejr, Mikael K.; Bluhm, Bodil A.; Sirenko, Boris; Ellingsen, Ingrid H.

2015-12-01

One of the logical predictions for a future Arctic characterized by warmer waters and reduced sea-ice is that new taxa will expand or invade Arctic seafloor habitats. Specific predictions regarding where this will occur and which taxa are most likely to become established or excluded are lacking, however. We synthesize recent studies and conduct new analyses in the context of climate forecasts and a paleontological perspective to make concrete predictions as to relevant mechanisms, regions, and functional traits contributing to future biodiversity changes. Historically, a warmer Arctic is more readily invaded or transited by boreal taxa than it is during cold periods. Oceanography of an ice-free Arctic Ocean, combined with life-history traits of invading taxa and availability of suitable habitat, determine expansion success. It is difficult to generalize as to which taxonomic groups or locations are likely to experience expansion, however, since species-specific, and perhaps population-specific autecologies, will determine success or failure. Several examples of expansion into the Arctic have been noted, and along with the results from the relatively few Arctic biological time-series suggest inflow shelves (Barents and Chukchi Seas), as well as West Greenland and the western Kara Sea, are most likely locations for expansion. Apparent temperature thresholds were identified for characteristic Arctic and boreal benthic fauna suggesting strong potential for range constrictions of Arctic, and expansions of boreal, fauna in the near future. Increasing human activities in the region could speed introductions of boreal fauna and reduce the value of a planktonic dispersal stage. Finally, shelf regions are likely to experience a greater impact, and also one with greater potential consequences, than the deep Arctic basin. Future research strategies should focus on monitoring as well as compiling basic physiological and life-history information of Arctic and boreal taxa, and integrate that with projections of human activities and likely ecosystem consequences to facilitate development of management strategies now and in the future.

Survival, movement, and health of hatchery-raised juvenile Lost River suckers within a mesocosm in Upper Klamath Lake, Oregon

USGS Publications Warehouse

Hereford, Danielle M.; Burdick, Summer M.; Elliott, Diane G.; Dolan-Caret, Amari; Conway, Carla M.; Harris, Alta C.

2016-01-28

The recovery of endangered Lost River suckers (Deltistes luxatus) in Upper Klamath Lake is limited by poor juvenile survival and failure to recruit into the adult population. Poor water quality, degradation of rearing habitat, and toxic levels of microcystin are hypothesized to contribute to low juvenile survival. Studies of wild juvenile suckers are limited in that capture rates are low and compromised individuals are rarely captured in passive nets. The goal of this study was to assess the use of a mesocosm for learning about juvenile survival, movement, and health. Hatchery-raised juvenile Lost River suckers were PIT (passive integrated transponder) tagged and monitored by three vertically stratified antennas. Fish locations within the mesocosm were recorded at least every 30 minutes and were assessed in relation to vertically stratified water-quality conditions. Vertical movement patterns were analyzed to identify the timing of mortality for each fish. Most mortality occurred from July 28 to August 16, 2014. Juvenile suckers spent daylight hours near the benthos and moved throughout the entire water column during dark hours. Diel movements were not in response to dissolved-oxygen concentrations, temperature, or pH. Furthermore, low dissolved-oxygen concentrations, high temperatures, high pH, high un-ionized ammonia, or high microcystin levels did not directly cause mortality, although indirect effects may have occurred. However, water-quality conditions known to be lethal to juvenile Lost River suckers did not occur during the study period. Histological assessment revealed severe gill hyperplasia and Ichthyobodo sp. infestations in most moribund fish. For these fish, Ichthyobodo sp. was likely the cause of mortality, although it is unclear if this parasite originated in the rearing facility because fish were not screened for this parasite prior to introduction. This study has demonstrated that we can effectively use a mesocosm equipped with antennas to learn about the timing of mortality, movement, and health of PIT-tagged hatchery-raised juvenile Lost River suckers.

Empirical relationships among resilience indicators on Micronesian reefs

USGS Publications Warehouse

Mumby, P.J.; Bejarano, S.; Golbuu, Y.; Steneck, R.S.; Arnold, S.N.; van Woesik, R.; Friedlander, A.M.

2013-01-01

A process-orientated understanding of ecosystems usually starts with an exploratory analysis of empirical relationships among potential drivers and state variables. While relationships among herbivory, algal cover, and coral recruitment, have been explored in the Caribbean, the nature of such relationships in the Pacific appears to be variable or unclear. Here, we examine potential drivers structuring the benthos and herbivorous fish assemblages of outer-shelf reefs in Micronesia (Palau, Guam and Pohnpei). Surveys were stratified by wave exposure and protection from fishing. High biomass of most herbivores was favoured by high wave exposure. High abundance of large-bodied scarids was associated with low turf abundance, high coral cover, and marine reserves. The remaining herbivores were more abundant in reefs with low coral cover, possibly because space and hence food limitation occur in high-coral-cover reefs. Rugosity had no detectable effect on herbivorous fish abundance once differences in exposure and coral cover were accounted for. At identical depths, high wave exposure was associated with greater volumes (cover × canopy height) of macroalgae and algal turfs, which most likely resulted from high primary productivity driven by flow. In exposed areas, macroalgal cover declined as the acanthurid biomass increased. The volume of algal turfs was negatively associated with coral cover and herbivore biomass. In turn, high coral cover and herbivore biomass are likely to intensify grazing. The density of juvenile corals was variable where macroalgal cover was low but was confined to lower densities where macroalgal cover was high. High coral cover and density of juvenile corals were favoured in sheltered habitats. While a weak positive relationship was found between scarid biomass and juvenile coral density, we hypothesise that high scarid densities may hinder juvenile density through increased corallivory. New hypotheses emerged that will help clarify the role of acanthurids, wave exposure, and corallivory in driving the recovery of Pacific coral communities.

Modelling climate change effects on benthos: Distributional shifts in the North Sea from 2001 to 2099

NASA Astrophysics Data System (ADS)

Weinert, Michael; Mathis, Moritz; Kröncke, Ingrid; Neumann, Hermann; Pohlmann, Thomas; Reiss, Henning

2016-06-01

In the marine realm, climate change can affect a variety of physico-chemical properties with wide-ranging biological effects, but the knowledge of how climate change affects benthic distributions is limited and mainly restricted to coastal environments. To project the response of benthic species of a shelf sea (North Sea) to the expected climate change, the distributions of 75 marine benthic species were modelled and the spatial changes in distribution were projected for 2099 based on modelled bottom temperature and salinity changes using the IPCC scenario A1B. Mean bottom temperature was projected to increase between 0.15 and 5.4 °C, while mean bottom salinity was projected to moderately increase by 1.7. The spatial changes in species distribution were modelled with Maxent and the direction and extent of these changes were assessed. The results showed a latitudinal northward shift for 64% of the species (maximum 109 km; brittle star Ophiothrix fragilis) and a southward shift for 36% (maximum 101 km; hermit crab Pagurus prideaux and the associated cloak anemone Adamsia carciniopados; 105 km). The relatively low rates of distributional shifts compared to fish or plankton species were probably influenced by the regional topography. The environmental gradients in the central North Sea along the 50 m depth contour might act as a 'barrier', possibly resulting in a compression of distribution range and hampering further shifts to the north. For 49 species this resulted in a habitat loss up to 100%, while only 11 species could benefit from the warming in terms of habitat gain. Particularly the benthic communities of the southern North Sea, where the strongest temperature increase was projected, would be strongly affected by the distributional changes, since key species showed northward shifts and high rates of habitat loss, with potential ramifications for the functioning of the ecosystem.

Life history of the Small Sandeel, Ammodytes tobianus, inferred from otolith microchemistry. A methodological approach

NASA Astrophysics Data System (ADS)

Laugier, F.; Feunteun, E.; Pecheyran, C.; Carpentier, A.

2015-11-01

Knowledge of life history and connectivity between essential ecological habitats are relevant for conservation and management of species and some natural tracers could be used to study the lifecycles of small or short-lived marine fishes. Although sandeels are central in marine food webs and are key species, there is incomplete knowledge about population mixing and migration patterns. For the first time the use of the otolith microchemistry on sandeel species is evaluated in the case of the Small Sandeel. Variations in microchemical fingerprints of 13 trace elements are performed with a Femtosecond LA-ICPM from the core to the margin of sagittal otolith and are compared within and between otoliths extracted from 34 fishes sampled in three different sites along the coast of the south-western English Channel in France. Firstly, preliminary investigations on the validity of the method revealed that Mg/Ca was the only ratio significantly dependant on fish ontogeny and sampling season. Secondly, the Mn/Ca, Zn/Ca, and Cu/Ca ratios enabled us to significantly discriminate among sampling sites. Thirdly, microchemical fingerprints of each life stage varied significantly among sampling sites but not within them, suggesting high site fidelity over relatively short distances. Finally, the fingerprints of all life stages were significantly different from those of the larval and metamorphosis stages. The otolith microchemistry could detect change of signature relative to the shift from a pelagic behaviour to a resident bentho-pelagic behaviour during the middle of the juvenile stage in Small Sandeels. Hence, analysis of trace element fingerprints in otoliths appears to be a valuable method to further studies on ontogenic habitat change, population mixing and variation of life history and be helpful for the management at local or regional scales of short-lived species such as those belonging to other Ammodytidae.

Coral larvae change their settlement preference for crustose coralline algae dependent on availability of bare space

NASA Astrophysics Data System (ADS)

Elmer, Franziska; Bell, James J.; Gardner, Jonathan P. A.

2018-06-01

Competition for space is a major factor affecting coral survival. Since adult coral colonies are sessile, the settlement preferences of larvae have a strong impact on the competition for space that corals will face post-metamorphosis and will therefore influence long-term survival. Laboratory-based studies show that in simplified systems coral larvae use cues to guide them to suitable settlement locations, an adaptation that enhances post-settlement survival. Settlement preferences have also been reported from the field, where coral larvae encounter a wide variety of different potential settlement surfaces as the availability of free substratum (bare space) changes over time. In this field-based study, the abundance of different encrusting organisms and bare space present on settlement tiles was compared to their abundance under newly settled pocilloporid and poritid recruits, to determine if recruits choose their settlement substratum randomly. Tiles deployed for 3, 9, 12 and 15 months were used to determine if settlement choice varied as a function of benthic community successional stage. We found that pocilloporid and poritid larvae changed their settlement preference depending on the age of the benthic community they encountered. They reacted neutrally to crustose coralline algae (CCA) on tiles deployed for 3 months when bare space was abundant, but showed a clear preference for settlement on CCA on tiles deployed for 9-15 months once bare space was limited. Simultaneously, poritid recruits showed a decreasing preference over time to settle on biofilm. This change in preference is not linked to the availability of CCA because its abundance did not change significantly between tiles deployed for 3 versus 9-15 months. These results indicate that coral recruits react to several settlement cues simultaneously, guiding them to different settlement locations as the benthos changes over time. Furthermore, recruits from both families reacted similarly, suggesting that this is an evolutionarily old adaption.

Recovery and diversification of marine communities following the late Permian mass extinction event in the western Palaeotethys

NASA Astrophysics Data System (ADS)

Foster, William J.; Sebe, Krisztina

2017-08-01

The recovery of benthic invertebrates following the late Permian mass extinction event is often described as occurring in the Middle Triassic associated with the return of Early Triassic Lazarus taxa, increased body sizes, platform margin metazoan reefs, and increased tiering. Most quantitative palaeoecological studies, however, are limited to the Early Triassic and the timing of the final phase of recovery is rarely quantified. Here, quantitative abundance data of benthic invertebrates were collected from the Middle Triassic (Anisian) succession of the Mecsek Mountains (Hungary), and analysed with univariate and multivariate statistics to investigate the timing of recovery following the late Permian mass extinction. These communities lived in a mixed siliciclastic-carbonate ramp setting on the western margin of the Palaeotethys Ocean. The new data presented here is combined with the previously studied Lower Triassic succession of the Aggtelek Karst (Hungary), which records deposition of comparable facies and in the same region of the Palaeotethys Ocean. The Middle Triassic benthic fauna can be characterised by three distinct ecological states. The first state is recorded in the Viganvár Limestone Formation representing mollusc-dominated communities restricted to above wave base, which are comparable to the lower and mid-Spathian Szin Marl Formation faunas. The second state is recorded in the Lapis Limestone Formation and records extensive bioturbation that is not limited to wave base and is comparable to the upper Spathian Szinpetri Limestone Formation. The third ecological state occurs in the Zuhánya Limestone Formation which was deposited in the Pelsonian Binodosus Zone, and has a more 'Palaeozoic' structure with sessile brachiopods dominating assemblages for the first time in the Mesozoic. The return of community-level characteristics to pre-extinction levels and the diversification of invertebrates suggests that the final stages of recovery and the radiation of the benthos in ramp settings following the late Permian mass extinction occurred in the upper Pelsonian Zuhánya Limestone Formation, approximately 8 million years after the extinction event.

Behavioral Responses of Concholepas concholepas (Bruguière, 1789) Larvae to Natural and Artificial Settlement Cues and Microbial Films.

PubMed

Rodriguez, S R; Riquelme, C; Campos, E O; Chavez, P; Brandan, E; Inestrosa, N C

1995-12-01

The behavioral responses of veliger larvae of the gastropod Concholepas concholepas were studied in the presence of different natural and artificial settlement cues and microbial films. Early pre-competent larvae stopped swimming, sank (due to ciliary arrests, retraction of the velum into the shell, or both), and remained inactive on the substratum when exposed to conspecific mucus and hemolymph. In both cases the effect was time-dependent and the number of larvae showing these behaviors decreased over time. Larvae exposed to NH4Cl (ammonium ion) showed a similar time- and dose-dependent response. A positive and time-dependent response was also observed when larvae were exposed to different extracellular matrix (ECM) components (i.e., collagen, gelatin, and fibronectin) and sulfated polysaccharides (i.e., carrageenan, heparin, and chondroitin sulfate). In this case the larvae remained attached to the substratum. However, the effect of sulfated polysaccharides on C. concholepas larval behavior was faster than that observed with other ECM molecules. We also studied the responses of premetamorphic C. concholepas larvae exposed to different microbial films. In chemotaxis experiments with different films, with glass as the substratum, larvae showed a significant preference for multispecific and diatoms films. When shells of C. concholepas were used as the substratum, the preference for multispecific films was clear and significant. Likewise, larvae showed velar contractions in the presence of all the films tested. Larvae exposed to multispecific films and to the microalga Prasinocladus marinus showed an increased ciliar movement. The finding that mucus and hemolymph of conspecific adults and ECM molecules (mainly sulfated polysaccharides) induce the cessation of swimming of C. concholepas larvae suggests a possible role for cell-surface receptors in mediating the larval response of marine organisms. Likewise, the positive chemotaxis responses of C. concholepas larvae to different microbial films suggest that microorganisms may have a role in bringing larvae close to settlement inducers on the marine benthos.

Experimental evidence of site specific preferential processing of either ice algae or phytoplankton by benthic macroinfauna in Lancaster Sound and North Water Polynyas, Canada

NASA Astrophysics Data System (ADS)

Mäkelä, Anni; Witte, Ursula; Archambault, Philippe

2016-04-01

Rapid warming is dramatically reducing the extent and thickness of summer sea ice of the Arctic Ocean, changing both the quantity and type of marine primary production as the longer open water period favours phytoplankton growth and reduces ice algal production. The benthic ecosystem is dependent on this sinking organic matter for source of energy, and ice algae is thought to be a superior quality food source due to higher essential fatty acid content. The resilience of the benthos to changing quality and quantity of food was investigated through sediment incubation experiments in the summer 2013 in two highly productive Arctic polynyas in the North Water and Lancaster Sound, Canada. The pathways of organic matter processing and contribution of different organisms to these processes was assessed through 13C and 15N isotope assimilation into macroinfaunal tissues. In North Water Polynya, the total and biomass specific uptake of ice algal derived C and N was higher than the uptake of phytoplankton, whereas an opposite trend was observed in Lancaster Sound. Polychaetes, especially individuals of families Sabellidae and Spionidae, unselectively ingested both algal types and were significant in the overall organic matter processing at both sites. Feeding preference was observed in crustaceans, which preferentially fed on ice algae at Lancaster Sound, but preferred phytoplankton in North Water Polynya. Bivalves also had a significant role in the organic matter processing overall, but only showed preferential feeding on phytoplankton at Lancaster Sound polynya. Overall the filter feeders and surface deposit feeders occupying lowest trophic levels were responsible for majority of the processing of both algal types. The results provide direct evidence of preferential resource utilisation by benthic macrofauna and highlight spatial differences in the processes. This helps to predict future patterns of nutrient cycling in Arctic sediments, with implications to benthic-pelagic coupling and overall marine productivity.