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Sample records for bipartite energy taxis

  1. Conserved residues in the HAMP domain define a new family of proposed bipartite energy taxis receptors.

    PubMed

    Elliott, Kathryn T; Zhulin, Igor B; Stuckey, Jeanne A; DiRita, Victor J

    2009-01-01

    HAMP domains, found in many bacterial signal transduction proteins, generally transmit an intramolecular signal between an extracellular sensory domain and an intracellular signaling domain. Studies of HAMP domains in proteins where both the input and output signals occur intracellularly are limited to those of the Aer energy taxis receptor of Escherichia coli, which has both a HAMP domain and a sensory PAS domain. Campylobacter jejuni has an energy taxis system consisting of the domains of Aer divided between two proteins, CetA (HAMP domain containing) and CetB (PAS domain containing). In this study, we found that the CetA HAMP domain differs significantly from that of Aer in the predicted secondary structure. Using similarity searches, we identified 55 pairs of HAMP/PAS proteins encoded by adjacent genes in a diverse group of microorganisms. We propose that these HAMP/PAS pairs form a new family of bipartite energy taxis receptors. Within these proteins, we identified nine residues in the HAMP domain and proximal signaling domain that are highly conserved, at least three of which are required for CetA function. Additionally, we demonstrated that CetA contributes to the invasion of human epithelial cells by C. jejuni, while CetB does not. This finding supports the hypothesis that members of HAMP/PAS pairs possess the capacity to act independently of each other in cellular traits other than energy taxis.

  2. Transposon mutagenesis of Campylobacter jejuni identifies a bipartite energy taxis system required for motility.

    PubMed

    Hendrixson, D R; Akerley, B J; DiRita, V J

    2001-04-01

    Campylobacter jejuni constitutes the leading cause of bacterial gastroenteritis in the United States and a major cause of diarrhoea worldwide. Little is known about virulence mechanisms in this organism because of the scarcity of suitable genetic tools. We have developed an efficient system of in vitro transposon mutagenesis using a mariner-based transposon and purified mariner transposase. Through in vitro transposition of C. jejuni chromosomal DNA followed by natural transformation of the transposed DNA, large random transposon mutant libraries consisting of approximately 16 000 individual mutants were generated. The first genetic screen of C. jejuni using a transposon-generated mutant library identified 28 mutants defective for flagellar motility, one of the few known virulence determinants of this pathogen. We developed a second genetic system, which allows for the construction of defined chromosomal deletions in C. jejuni, and demonstrated the requirement of sigma28 and sigma54 for motility. In addition, we show that sigma28 is involved in the transcription of flaA and that sigma54 is required for transcription of three other flagellar genes, flaB and flgDE. We also identified two previously uncharacterized genes required for motility encoding proteins that we call CetA and CetB, which mediate energy taxis responses. Through our analysis of the Cet proteins, we propose a unique mechanism for sensing energy levels and mediating energy taxis in C. jejuni.

  3. Characterization of CetA and CetB, a bipartite energy taxis system in Campylobacter jejuni.

    PubMed

    Elliott, Kathryn T; Dirita, Victor J

    2008-09-01

    The energy taxis receptor Aer, in Escherichia coli, senses changes in the redox state of the electron transport system via an flavin adenine dinucleotide cofactor bound to a PAS domain. The PAS domain (a sensory domain named after three proteins Per, ARNT and Sim, where it was first identified) is thought to interact directly with the Aer HAMP domain to transmit this signal to the highly conserved domain (HCD) found in chemotaxis receptors. An apparent energy taxis system in Campylobacter jejuni is composed of two proteins, CetA and CetB, that have the domains of Aer divided between them. CetB has a PAS domain, while CetA has a predicted transmembrane region, HAMP domain and the HCD. In this study, we examined the expression of cetA and cetB and the biochemical properties of the proteins they encode. cetA and cetB are co-transcribed independently of the flagellar regulon. CetA has two transmembrane helices in a helical hairpin while CetB is a peripheral membrane protein tightly associated with the membrane. CetB levels are CetA dependent. Additionally, we demonstrated that both CetA and CetB participate in complexes, including a likely CetB dimer and a complex that may include both CetA and CetB. This study provides a foundation for further characterization of signal transduction mechanisms within CetA/CetB.

  4. Bacterial energy taxis: a global strategy?

    PubMed

    Schweinitzer, Tobias; Josenhans, Christine

    2010-07-01

    A functional energy metabolism is one of the most important requirements for survival of all kinds of organisms including bacteria. Therefore, many bacteria actively seek conditions of optimal metabolic activity, a behaviour which can be termed "energy taxis". Motility, combined with the sensory perception of the internal energetic conditions, is prerequisite for tactic responses to different energy levels and metabolic yields. Diverse mechanisms of energy sensing and tactic response have evolved among various bacteria. Many of the known energy taxis sensors group among the methyl-accepting chemotaxis protein (MCP)-like sensors. This review summarizes recent advances in the field of energy taxis and explores the current concept that energy taxis is an important part of the bacterial behavioural repertoire in order to navigate towards more favourable metabolic niches and to survive in a specific habitat.

  5. Ecological role of energy taxis in microorganisms.

    PubMed

    Alexandre, Gladys; Greer-Phillips, Suzanne; Zhulin, Igor B

    2004-02-01

    Motile microorganisms rapidly respond to changes in various physico-chemical gradients by directing their motility to more favorable surroundings. Energy generation is one of the most important parameters for the survival of microorganisms in their environment. Therefore it is not surprising that microorganisms are able to monitor changes in the cellular energy generating processes. The signal for this behavioral response, which is called energy taxis, originates within the electron transport system. By coupling energy metabolism and behavior, energy taxis is fine-tuned to the environment a cell finds itself in and allows efficient adaptation to changing conditions that affect cellular energy levels. Thus, energy taxis provides cells with a versatile sensory system that enables them to navigate to niches where energy generation is optimized. This behavior is likely to govern vertical species stratification and the active migration of motile cells in response to shifting gradients of electron donors and/or acceptors which are observed within microbial mats, sediments and soil pores. Energy taxis has been characterized in several species and might be widespread in the microbial world. Genome sequencing revealed that many microorganisms from aquatic and soil environments possess large numbers of chemoreceptors and are likely to be capable of energy taxis. In contrast, species that have a fewer number of chemoreceptors are often found in specific, confined environments, where relatively constant environmental conditions are expected. Future studies focusing on characterizing behavioral responses in species that are adapted to diverse environmental conditions should unravel the molecular mechanisms underlying sensory behavior in general and energy taxis in particular. Such knowledge is critical to a better understanding of the ecological role of energy taxis.

  6. Salmonella uses energy taxis to benefit from intestinal inflammation.

    PubMed

    Rivera-Chávez, Fabian; Winter, Sebastian E; Lopez, Christopher A; Xavier, Mariana N; Winter, Maria G; Nuccio, Sean-Paul; Russell, Joseph M; Laughlin, Richard C; Lawhon, Sara D; Sterzenbach, Torsten; Bevins, Charles L; Tsolis, Renée M; Harshey, Rasika; Adams, L Garry; Bäumler, Andreas J

    2013-01-01

    Chemotaxis enhances the fitness of Salmonella enterica serotype Typhimurium (S. Typhimurium) during colitis. However, the chemotaxis receptors conferring this fitness advantage and their cognate signals generated during inflammation remain unknown. Here we identify respiratory electron acceptors that are generated in the intestinal lumen as by-products of the host inflammatory response as in vivo signals for methyl-accepting chemotaxis proteins (MCPs). Three MCPs, including Trg, Tsr and Aer, enhanced the fitness of S. Typhimurium in a mouse colitis model. Aer mediated chemotaxis towards electron acceptors (energy taxis) in vitro and required tetrathionate respiration to confer a fitness advantage in vivo. Tsr mediated energy taxis towards nitrate but not towards tetrathionate in vitro and required nitrate respiration to confer a fitness advantage in vivo. These data suggest that the energy taxis receptors Tsr and Aer respond to distinct in vivo signals to confer a fitness advantage upon S. Typhimurium during inflammation by enabling this facultative anaerobic pathogen to seek out favorable spatial niches containing host-derived electron acceptors that boost its luminal growth.

  7. Salmonella Uses Energy Taxis to Benefit from Intestinal Inflammation

    PubMed Central

    Rivera-Chávez, Fabian; Winter, Sebastian E.; Lopez, Christopher A.; Xavier, Mariana N.; Winter, Maria G.; Nuccio, Sean-Paul; Russell, Joseph M.; Laughlin, Richard C.; Lawhon, Sara D.; Sterzenbach, Torsten; Bevins, Charles L.; Tsolis, Renée M.; Harshey, Rasika; Adams, L. Garry; Bäumler, Andreas J.

    2013-01-01

    Chemotaxis enhances the fitness of Salmonella enterica serotype Typhimurium (S. Typhimurium) during colitis. However, the chemotaxis receptors conferring this fitness advantage and their cognate signals generated during inflammation remain unknown. Here we identify respiratory electron acceptors that are generated in the intestinal lumen as by-products of the host inflammatory response as in vivo signals for methyl-accepting chemotaxis proteins (MCPs). Three MCPs, including Trg, Tsr and Aer, enhanced the fitness of S. Typhimurium in a mouse colitis model. Aer mediated chemotaxis towards electron acceptors (energy taxis) in vitro and required tetrathionate respiration to confer a fitness advantage in vivo. Tsr mediated energy taxis towards nitrate but not towards tetrathionate in vitro and required nitrate respiration to confer a fitness advantage in vivo. These data suggest that the energy taxis receptors Tsr and Aer respond to distinct in vivo signals to confer a fitness advantage upon S. Typhimurium during inflammation by enabling this facultative anaerobic pathogen to seek out favorable spatial niches containing host-derived electron acceptors that boost its luminal growth. PMID:23637594

  8. Glycerol elicits energy taxis of Escherichia coli and Salmonella typhimurium.

    PubMed

    Zhulin, I B; Rowsell, E H; Johnson, M S; Taylor, B L

    1997-05-01

    Escherichia coli and Salmonella typhimurium show positive chemotaxis to glycerol, a chemical previously reported to be a repellent for E. coli. The threshold of the attractant response in both species was 10(-6) M glycerol. Glycerol chemotaxis was energy dependent and coincident with an increase in membrane potential. Metabolism of glycerol was required for chemotaxis, and when lactate was present to maintain energy production in the absence of glycerol, the increases in membrane potential and chemotactic response upon addition of glycerol were abolished. Methylation of a chemotaxis receptor was not required for positive glycerol chemotaxis in E. coli or S. typhimurium but is involved in the negative chemotaxis of E. coli to high concentrations of glycerol. We propose that positive chemotaxis to glycerol in E. coli and S. typhimurium is an example of energy taxis mediated via a signal transduction pathway that responds to changes in the cellular energy level.

  9. Taxis of Pseudomonas putida F1 toward phenylacetic acid is mediated by the energy taxis receptor Aer2.

    PubMed

    Luu, Rita A; Schneider, Benjamin J; Ho, Christie C; Nesteryuk, Vasyl; Ngwesse, Stacy E; Liu, Xianxian; Parales, Juanito V; Ditty, Jayna L; Parales, Rebecca E

    2013-04-01

    The phenylacetic acid (PAA) degradation pathway is a widely distributed funneling pathway for the catabolism of aromatic compounds, including the environmental pollutants styrene and ethylbenzene. However, bacterial chemotaxis to PAA has not been studied. The chemotactic strain Pseudomonas putida F1 has the ability to utilize PAA as a sole carbon and energy source. We identified a putative PAA degradation gene cluster (paa) in P. putida F1 and demonstrated that PAA serves as a chemoattractant. The chemotactic response was induced during growth with PAA and was dependent on PAA metabolism. A functional cheA gene was required for the response, indicating that PAA is sensed through the conserved chemotaxis signal transduction system. A P. putida F1 mutant lacking the energy taxis receptor Aer2 was deficient in PAA taxis, indicating that Aer2 is responsible for mediating the response to PAA. The requirement for metabolism and the role of Aer2 in the response indicate that P. putida F1 uses energy taxis to detect PAA. We also revealed that PAA is an attractant for Escherichia coli; however, a mutant lacking a functional Aer energy receptor had a wild-type response to PAA in swim plate assays, suggesting that PAA is detected through a different mechanism in E. coli. The role of Aer2 as an energy taxis receptor provides the potential to sense a broad range of aromatic growth substrates as chemoattractants. Since chemotaxis has been shown to enhance the biodegradation of toxic pollutants, the ability to sense PAA gradients may have implications for the bioremediation of aromatic hydrocarbons that are degraded via the PAA pathway.

  10. Taxis of Pseudomonas putida F1 toward Phenylacetic Acid Is Mediated by the Energy Taxis Receptor Aer2

    PubMed Central

    Luu, Rita A.; Schneider, Benjamin J.; Ho, Christie C.; Nesteryuk, Vasyl; Ngwesse, Stacy E.; Liu, Xianxian; Parales, Juanito V.; Ditty, Jayna L.

    2013-01-01

    The phenylacetic acid (PAA) degradation pathway is a widely distributed funneling pathway for the catabolism of aromatic compounds, including the environmental pollutants styrene and ethylbenzene. However, bacterial chemotaxis to PAA has not been studied. The chemotactic strain Pseudomonas putida F1 has the ability to utilize PAA as a sole carbon and energy source. We identified a putative PAA degradation gene cluster (paa) in P. putida F1 and demonstrated that PAA serves as a chemoattractant. The chemotactic response was induced during growth with PAA and was dependent on PAA metabolism. A functional cheA gene was required for the response, indicating that PAA is sensed through the conserved chemotaxis signal transduction system. A P. putida F1 mutant lacking the energy taxis receptor Aer2 was deficient in PAA taxis, indicating that Aer2 is responsible for mediating the response to PAA. The requirement for metabolism and the role of Aer2 in the response indicate that P. putida F1 uses energy taxis to detect PAA. We also revealed that PAA is an attractant for Escherichia coli; however, a mutant lacking a functional Aer energy receptor had a wild-type response to PAA in swim plate assays, suggesting that PAA is detected through a different mechanism in E. coli. The role of Aer2 as an energy taxis receptor provides the potential to sense a broad range of aromatic growth substrates as chemoattractants. Since chemotaxis has been shown to enhance the biodegradation of toxic pollutants, the ability to sense PAA gradients may have implications for the bioremediation of aromatic hydrocarbons that are degraded via the PAA pathway. PMID:23377939

  11. Unexpected chemoreceptors mediate energy taxis towards electron acceptors in Shewanella oneidensis.

    PubMed

    Baraquet, Claudine; Théraulaz, Laurence; Iobbi-Nivol, Chantal; Méjean, Vincent; Jourlin-Castelli, Cécile

    2009-07-01

    Shewanella oneidensis uses a wide range of terminal electron acceptors for respiration. In this study, we show that the chemotactic response of S. oneidensis to anaerobic electron acceptors requires functional electron transport systems. Deletion of the genes encoding dimethyl sulphoxide and trimethylamine N-oxide reductases, or inactivation of these molybdoenzymes as well as nitrate reductase by addition of tungstate, abolished electron acceptor taxis. Moreover, addition of nigericin prevented taxis towards trimethylamine N-oxide, dimethyl sulphoxide, nitrite, nitrate and fumarate, showing that this process depends on the DeltapH component of the proton motive force. These data, together with those concerning response to metals (Bencharit and Ward, 2005), support the idea that, in S. oneidensis, taxis towards electron acceptors is governed by an energy taxis mechanism. Surprisingly, energy taxis in S. oneidensis is not mediated by the PAS-containing chemoreceptors but rather by a chemoreceptor (SO2240) containing a Cache domain. Four other chemoreceptors also play a minor role in this process. These results indicate that energy taxis can be mediated by new types of chemoreceptors.

  12. Understanding taxi travel patterns

    NASA Astrophysics Data System (ADS)

    Cai, Hua; Zhan, Xiaowei; Zhu, Ji; Jia, Xiaoping; Chiu, Anthony S. F.; Xu, Ming

    2016-09-01

    Taxis play important roles in modern urban transportation systems, especially in mega cities. While providing necessary amenities, taxis also significantly contribute to traffic congestion, urban energy consumption, and air pollution. Understanding the travel patterns of taxis is thus important for addressing many urban sustainability challenges. Previous research has primarily focused on examining the statistical properties of passenger trips, which include only taxi trips occupied with passengers. However, unoccupied trips are also important for urban sustainability issues because they represent potential opportunities to improve the efficiency of the transportation system. Therefore, we need to understand the travel patterns of taxis as an integrated system, instead of focusing only on the occupied trips. In this study we examine GPS trajectory data of 11,880 taxis in Beijing, China for a period of three weeks. Our results show that taxi travel patterns share similar traits with travel patterns of individuals but also exhibit differences. Trip displacement distribution of taxi travels is statistically greater than the exponential distribution and smaller than the truncated power-law distribution. The distribution of short trips (less than 30 miles) can be best fitted with power-law while long trips follow exponential decay. We use radius of gyration to characterize individual taxi's travel distance and find that it does not follow a truncated power-law as observed in previous studies. Spatial and temporal regularities exist in taxi travels. However, with increasing spatial coverage, taxi trips can exhibit dual high probability density centers.

  13. Signal balancing by the CetABC and CetZ chemoreceptors controls energy taxis in Campylobacter jejuni.

    PubMed

    Reuter, Mark; van Vliet, Arnoud H M

    2013-01-01

    The coupling of environmental sensing to flagella-mediated directed motility allows bacteria to move to optimum environments for growth and survival, either by sensing external stimuli (chemotaxis) or monitoring internal metabolic status (energy taxis). Sensing is mediated by transducer-like proteins (Tlp), either located in the membrane or in the cytoplasm, which commonly influence motility via the CheA-CheY chemotaxis pathway. In this study we have investigated the role of PAS-domain-containing intracellular Tlp-sensors in energy taxis of the food-borne pathogen Campylobacter jejuni, using plate- and tube-based assays utilising the conversion of the redox indicator dyes triphenyl tetrazolium chloride (TTC) and resazurin. Inactivation of the genes encoding the Campylobacter Energy Taxis system (CetA (Tlp9) and CetB (Aer2)) in C. jejuni strain NCTC 11168 resulted in reduced taxis. Inactivation of the cj1191c gene, encoding the CetB homolog CetC (Aer1), did not affect taxis per se, but the cetC gene complemented a cetB mutant in trans, indicating that CetC can form a functional signal transduction complex with CetA in the absence of CetB. Inactivation of both CetB and CetC resulted in greatly reduced taxis confirming the role of CetC in energy taxis. Inactivation of the cj1110c gene, encoding Tlp8 (CetZ), a cytoplasmic sensor with two PAS-domains, resulted in increased taxis, a phenotype opposite to that of CetAB. Inactivation of the cheA gene resulted in the same overall phenotype as the cetAB mutant in both wild-type and cetZ backgrounds, suggesting that both systems use the CheA system for signal transduction. Absence of both CetAB and CetZ resulted in the cetAB taxis phenotype, suggesting that CetZ is subordinate to CetAB. In conclusion, we present evidence that C. jejuni balances the input from two counteracting PAS-domain-containing sensory systems to position itself for optimal usage of energy resources.

  14. Identification of a malate chemoreceptor in Pseudomonas aeruginosa by screening for chemotaxis defects in an energy taxis-deficient mutant.

    PubMed

    Alvarez-Ortega, Carolina; Harwood, Caroline S

    2007-12-01

    We found that a robust energy taxis response mediated by the Aer receptor can sometimes mask chemotaxis mediated by other methyl-accepting chemotaxis proteins (MCPs) in Pseudomonas aeruginosa. We identified PA2652 as a chemoreceptor for malate by screening aer mcp double mutants by using swarm plate assays.

  15. Simulation of the interaction of bipartite bimetallic clusters with low-energy argon clusters

    NASA Astrophysics Data System (ADS)

    Shyrokorad, D. V.; Kornich, G. V.; Buga, S. G.

    2017-01-01

    Molecular-dynamics simulation of the evolution of bipartite bimetallic clusters consisting of 390 atoms during bombardment by Arn ( n = 1, 2, 13) clusters with initial energies from 1 eV to 1.4 keV is performed. Binary Cu-Au and Ni-Al clusters consisting of equal atomic fractions of corresponding elements were used as a target. As a result of simulation, the temperatures, changes in the potential energy, sputtering yields, and intensities of collision-stimulated displacement of atoms through the interface of monometallic parts of binary clusters, depending on the size and energy of incident particle, are obtained.

  16. Perseus Taxi

    NASA Technical Reports Server (NTRS)

    1991-01-01

    The Perseus proof-of-concept vehicle is seen here as it taxis on Rogers Dry Lake, adjacent the Dryden Flight Research Center, Edwards, California. Perseus B is a remotely piloted aircraft developed as a design-performance testbed under NASA's Environmental Research Aircraft and Sensor Technology (ERAST) project. Perseus is one of several flight vehicles involved in the ERAST project. A piston engine, propeller-powered aircraft, Perseus was designed and built by Aurora Flight Sciences Corporation, Manassas, Virginia. The objectives of Perseus B's ERAST flight tests have been to reach and maintain horizontal flight above altitudes of 60,000 feet and demonstrate the capability to fly missions lasting from 8 to 24 hours, depending on payload and altitude requirements. The Perseus B aircraft established an unofficial altitude record for a single-engine, propeller-driven, remotely piloted aircraft on June 27, 1998. It reached an altitude of 60,280 feet. In 1999, several modifications were made to the Perseus aircraft including engine, avionics, and flight-control-system improvements. These improvements were evaluated in a series of operational readiness and test missions at the Dryden Flight Research Center, Edwards, California. Perseus is a high-wing monoplane with a conventional tail design. Its narrow, straight, high-aspect-ratio wing is mounted atop the fuselage. The aircraft is pusher-designed with the propeller mounted in the rear. This design allows for interchangeable scientific-instrument payloads to be placed in the forward fuselage. The design also allows for unobstructed airflow to the sensors and other devices mounted in the payload compartment. The Perseus B that underwent test and development in 1999 was the third generation of the Perseus design, which began with the Perseus Proof-Of-Concept aircraft. Perseus was initially developed as part of NASA's Small High-Altitude Science Aircraft (SHASA) program, which later evolved into the ERAST project. The

  17. Large-Alphabet Quantum Key Distribution Using Energy-Time Entangled Bipartite States

    NASA Astrophysics Data System (ADS)

    Ali-Khan, Irfan; Broadbent, Curtis J.; Howell, John C.

    2007-02-01

    We present a protocol for large-alphabet quantum key distribution (QKD) using energy-time entangled biphotons. Binned, high-resolution timing measurements are used to generate a large-alphabet key with over 10 bits of information per photon pair, albeit with large noise. QKD with 5% bit error rate is demonstrated with 4 bits of information per photon pair, where the security of the quantum channel is determined by the visibility of Franson interference fringes. The protocol is easily generalizable to even larger alphabets, and utilizes energy-time entanglement which is robust to transmission over large distances in fiber.

  18. Paresev on Taxi Strip

    NASA Technical Reports Server (NTRS)

    1962-01-01

    Test pilot Milton Thompson sitting in NASA Flight Research Center-built Paresev 1 (Paraglider Research Vehicle) on the taxi strip in front of the NASA Flight Research Center in 1962. In this photo the control stick can be seen coming from overhead and hanging in front of the pilot. The control system was a direct link with the wing membrane made of doped Irish linen. By maintaining simplicity during construction, it was possible to make control and configuration changes overnight and, in many instances, in minutes.

  19. Bipartite patella fracture.

    PubMed

    Canizares, George H; Selesnick, F Harlan

    2003-02-01

    Bipartite patella fracture is an uncommon injury that has rarely been described in the literature. It can be quite debilitating in the competitive athlete and is often overlooked by the treating physician. A bone scan can be helpful in confirming the diagnosis, and appropriate treatment often results in a successful outcome.

  20. Pleiotropic aspartate taxis and serine taxis mutants of Escherichia coli.

    PubMed

    Reader, R W; Tso, W W; Springer, M S; Goy, M F; Adler, J

    1979-04-01

    Mutants that at one time were thought to be specifically defective in taxis toward aspartate and related amino acids (tar mutants) or specifically defective in taxis toward serine and related amino acids (tar mutants) are now shown to be pleiotropic in their defects. The tar mutants also lack taxis toward maltose and away from Co2+ and Ni2+. The tsr mutants are altered in their response to a variety of repellents. Double mutants (tar tsr) fail in nearly all chemotactic responses. The tar and tsr mutants provide evidence for two complementary, converging pathways of information flow: certain chemoreceptors feed information into the tar pathway and others into the tsr pathway. The tar and tsr products have been shown to be two different sets of methylated proteins.

  1. Latent geometry of bipartite networks

    NASA Astrophysics Data System (ADS)

    Kitsak, Maksim; Papadopoulos, Fragkiskos; Krioukov, Dmitri

    2017-03-01

    Despite the abundance of bipartite networked systems, their organizing principles are less studied compared to unipartite networks. Bipartite networks are often analyzed after projecting them onto one of the two sets of nodes. As a result of the projection, nodes of the same set are linked together if they have at least one neighbor in common in the bipartite network. Even though these projections allow one to study bipartite networks using tools developed for unipartite networks, one-mode projections lead to significant loss of information and artificial inflation of the projected network with fully connected subgraphs. Here we pursue a different approach for analyzing bipartite systems that is based on the observation that such systems have a latent metric structure: network nodes are points in a latent metric space, while connections are more likely to form between nodes separated by shorter distances. This approach has been developed for unipartite networks, and relatively little is known about its applicability to bipartite systems. Here, we fully analyze a simple latent-geometric model of bipartite networks and show that this model explains the peculiar structural properties of many real bipartite systems, including the distributions of common neighbors and bipartite clustering. We also analyze the geometric information loss in one-mode projections in this model and propose an efficient method to infer the latent pairwise distances between nodes. Uncovering the latent geometry underlying real bipartite networks can find applications in diverse domains, ranging from constructing efficient recommender systems to understanding cell metabolism.

  2. Taxi 'sugar daddies' and taxi queens: male taxi driver attitudes regarding transactional relationships in the Western Cape, South Africa.

    PubMed

    Potgieter, Cheryl; Strebel, Anna; Shefer, Tamara; Wagner, Claire

    2012-11-01

    Media reports are emerging on the phenomenon of young girls who travel with older mini-bus taxi drivers, and who are thought to have sex with the drivers in exchange for gifts and money. The extent to which such relationships might facilitate unsafe sexual practices and increased risks for both the men and the young women, often referred to as taxi queens, remains an important question in the light of the current challenges of HIV/AIDS in sub-Saharan Africa. However, very little research has been undertaken on this issue, especially regarding the perceptions and experiences of taxi drivers. Thus this paper aims to provide some preliminary findings on taxi drivers' attitudes and beliefs about taxi queens and their relationships with taxi drivers. A 22-item questionnaire was administered to 223 male taxi drivers in two regions in the Western Cape Province, South Africa. Taxi drivers in this study largely saw the relationship between taxi drivers and the young girls who ride with them as providing status for both the girls and drivers, and there seemed to be recognition of the transactional nature of the relationship between taxi drivers and taxi queens. The stigmatisation of young girls who ride with taxi drivers was evident. Drivers had knowledge and awareness of the risks of unsafe sex and supported condom use, although there appeared to be some uncertainty and confusion about the likelihood of HIV infection between drivers and girls. While taxi drivers recognised the role of alcohol in relationships with young girls, they seemed to deny that the abuse of drugs was common. The study highlights a number of key areas that need to be explored with men in the taxi industry, in order to address risk behaviours for both taxi drivers and the girls who ride with them.

  3. Bipartite units of nonlocality

    SciTech Connect

    Forster, Manuel; Wolf, Stefan

    2011-10-15

    Imagine a task in which a group of separated players aim to simulate a statistic that violates a Bell inequality. Given measurement choices the players shall announce an output based solely on the results of local operations--which they can discuss before the separation--on shared random data and shared copies of a so-called unit correlation. In the first part of this paper we show that in such a setting the simulation of any bipartite correlation, not containing the possibility of signaling, can be made arbitrarily accurate by increasing the number of shared Popescu-Rohrlich (PR) boxes. This establishes the PR box as a simple asymptotic unit of bipartite nonlocality. In the second part we study whether this property extends to the multipartite case. More generally, we ask if it is possible for separated players to asymptotically reproduce any nonsignaling statistic by local operations on bipartite unit correlations. We find that nonadaptive strategies are limited by a constant accuracy and that arbitrary strategies on n resource correlations make a mistake with a probability greater or equal to c/n, for some constant c.

  4. Hidden variables in bipartite networks.

    PubMed

    Kitsak, Maksim; Krioukov, Dmitri

    2011-08-01

    We introduce and study random bipartite networks with hidden variables. Nodes in these networks are characterized by hidden variables that control the appearance of links between node pairs. We derive analytic expressions for the degree distribution, degree correlations, the distribution of the number of common neighbors, and the bipartite clustering coefficient in these networks. We also establish the relationship between degrees of nodes in original bipartite networks and in their unipartite projections. We further demonstrate how hidden variable formalism can be applied to analyze topological properties of networks in certain bipartite network models, and verify our analytical results in numerical simulations.

  5. Bipartite composite fermion States.

    PubMed

    Sreejith, G J; Toke, C; Wójs, A; Jain, J K

    2011-08-19

    We study a class of ansatz wave functions in which composite fermions form two correlated "partitions." These "bipartite" composite fermion states are demonstrated to be very accurate for electrons in a strong magnetic field interacting via a short-range 3-body interaction potential over a broad range of filling factors. Furthermore, this approach gives accurate approximations for the exact Coulomb ground state at 2+3/5 and 2+4/7 and is thus a promising candidate for the observed fractional quantum Hall states at the hole conjugate fractions at 2+2/5 and 2+3/7.

  6. On-board gaseous emissions of LPG taxis and estimation of taxi fleet emissions.

    PubMed

    Lau, Jason; Hung, W T; Cheung, C S

    2011-11-15

    Instantaneous CO, NO, and HC emissions and exhaust flow rates from four LPG taxis, which adhered to Euro 2-4 emission standards, were measured using a sophisticated portable emission measurement system (PEMS). Instantaneous air/fuel ratios, emission rates, and emission factors at different operating modes were derived to explore the emission characteristics of these four taxis. Results show that gaseous emissions from these four taxis exceed emission standards, due to extended vehicle use and poor maintenance. NO emissions from newer taxis are lower whilst CO and HC emissions of the Euro 4 taxi are similar to those of Euro 2 taxis during idling and low speed travel. The taxis emit lower amounts of gaseous pollutants whilst idling and emit the highest amounts of CO and NO whilst accelerating. Large fluctuations in air/fuel ratios can be observed from the Euro 4 taxi during idling, indicating a malfunction of fuel supply control to the engine. Such fluctuations are not observed from the other taxis. This shows that a Euro 4 taxi is not necessarily cleaner than a Euro 3 taxi. Emission factors derived from on-board measurements are applied to estimate gaseous emissions from the taxi fleet; these results show that emissions are higher during peak hour traffic conditions. An estimate of the taxi fleet's emissions whilst the older taxis are replaced is also calculated. It can be seen that faster replacement of older taxis can lead to reductions in gaseous emissions from the taxi fleet. This study shows that the PEMS is an adequate tool for measuring emissions from LPG vehicles and that there is an urgent need to enforce emission standards on taxis. This study also shows that on-board measurements should be incorporated in the estimation of emissions from other vehicle types. This would result in better emission estimations under local traffic conditions.

  7. Yellow taxis have fewer accidents than blue taxis because yellow is more visible than blue.

    PubMed

    Ho, Teck-Hua; Chong, Juin Kuan; Xia, Xiaoyu

    2017-03-21

    Is there a link between the color of a taxi and how many accidents it has? An analysis of 36 mo of detailed taxi, driver, and accident data (comprising millions of data points) from the largest taxi company in Singapore suggests that there is an explicit link. Yellow taxis had 6.1 fewer accidents per 1,000 taxis per month than blue taxis, a 9% reduction in accident probability. We rule out driver difference as an explanatory variable and empirically show that because yellow taxis are more noticeable than blue taxis-especially when in front of another vehicle, and in street lighting-other drivers can better avoid hitting them, directly reducing the accident rate. This finding can play a significant role when choosing colors for public transportation and may save lives as well as millions of dollars.

  8. TAXI Interface Demultiplexes Proprietarily Formatted Data

    NASA Technical Reports Server (NTRS)

    Newnan, Bruce G.; Ahiport, Steven F.

    2001-01-01

    The 'TAXI Direct-to-Disk' interface is a special purpose interface unit for demultiplexing of data from a Racal Storeplex (or equivalent) multichannel recorder onto one or more hard disks that reside in, and/or are controlled by, a personal computer (PC). The acronym 'TAXI' signifies transparent asynchronous transceiver interface. The TAXI interface was developed for original use in capturing data from instrumentation on a test stand in a NASA rocket testing facility. The installation of the TAXI interface, in conjunction with other modifications, causes the transfer of data to take place in real time, so that the data are immediately available for review during or after the test.

  9. Yellow taxis have fewer accidents than blue taxis because yellow is more visible than blue

    PubMed Central

    Ho, Teck-Hua; Chong, Juin Kuan; Xia, Xiaoyu

    2017-01-01

    Is there a link between the color of a taxi and how many accidents it has? An analysis of 36 mo of detailed taxi, driver, and accident data (comprising millions of data points) from the largest taxi company in Singapore suggests that there is an explicit link. Yellow taxis had 6.1 fewer accidents per 1,000 taxis per month than blue taxis, a 9% reduction in accident probability. We rule out driver difference as an explanatory variable and empirically show that because yellow taxis are more noticeable than blue taxis—especially when in front of another vehicle, and in street lighting—other drivers can better avoid hitting them, directly reducing the accident rate. This finding can play a significant role when choosing colors for public transportation and may save lives as well as millions of dollars. PMID:28265081

  10. Pattern formation in prey-taxis systems.

    PubMed

    Lee, J M; Hillen, T; Lewis, M A

    2009-11-01

    In this paper, we consider spatial predator-prey models with diffusion and prey-taxis. We investigate necessary conditions for pattern formation using a variety of non-linear functional responses, linear and non-linear predator death terms, linear and non-linear prey-taxis sensitivities, and logistic growth or growth with an Allee effect for the prey. We identify combinations of the above non-linearities that lead to spatial pattern formation and we give numerical examples. It turns out that prey-taxis stabilizes the system and for large prey-taxis sensitivity we do not observe pattern formation. We also study and find necessary conditions for global stability for a type I functional response, logistic growth for the prey, non-linear predator death terms, and non-linear prey-taxis sensitivity.

  11. Fractal and multifractal analyses of bipartite networks.

    PubMed

    Liu, Jin-Long; Wang, Jian; Yu, Zu-Guo; Xie, Xian-Hua

    2017-03-31

    Bipartite networks have attracted considerable interest in various fields. Fractality and multifractality of unipartite (classical) networks have been studied in recent years, but there is no work to study these properties of bipartite networks. In this paper, we try to unfold the self-similarity structure of bipartite networks by performing the fractal and multifractal analyses for a variety of real-world bipartite network data sets and models. First, we find the fractality in some bipartite networks, including the CiteULike, Netflix, MovieLens (ml-20m), Delicious data sets and (u, v)-flower model. Meanwhile, we observe the shifted power-law or exponential behavior in other several networks. We then focus on the multifractal properties of bipartite networks. Our results indicate that the multifractality exists in those bipartite networks possessing fractality. To capture the inherent attribute of bipartite network with two types different nodes, we give the different weights for the nodes of different classes, and show the existence of multifractality in these node-weighted bipartite networks. In addition, for the data sets with ratings, we modify the two existing algorithms for fractal and multifractal analyses of edge-weighted unipartite networks to study the self-similarity of the corresponding edge-weighted bipartite networks. The results show that our modified algorithms are feasible and can effectively uncover the self-similarity structure of these edge-weighted bipartite networks and their corresponding node-weighted versions.

  12. Fractal and multifractal analyses of bipartite networks

    PubMed Central

    Liu, Jin-Long; Wang, Jian; Yu, Zu-Guo; Xie, Xian-Hua

    2017-01-01

    Bipartite networks have attracted considerable interest in various fields. Fractality and multifractality of unipartite (classical) networks have been studied in recent years, but there is no work to study these properties of bipartite networks. In this paper, we try to unfold the self-similarity structure of bipartite networks by performing the fractal and multifractal analyses for a variety of real-world bipartite network data sets and models. First, we find the fractality in some bipartite networks, including the CiteULike, Netflix, MovieLens (ml-20m), Delicious data sets and (u, v)-flower model. Meanwhile, we observe the shifted power-law or exponential behavior in other several networks. We then focus on the multifractal properties of bipartite networks. Our results indicate that the multifractality exists in those bipartite networks possessing fractality. To capture the inherent attribute of bipartite network with two types different nodes, we give the different weights for the nodes of different classes, and show the existence of multifractality in these node-weighted bipartite networks. In addition, for the data sets with ratings, we modify the two existing algorithms for fractal and multifractal analyses of edge-weighted unipartite networks to study the self-similarity of the corresponding edge-weighted bipartite networks. The results show that our modified algorithms are feasible and can effectively uncover the self-similarity structure of these edge-weighted bipartite networks and their corresponding node-weighted versions. PMID:28361962

  13. Epidemic thresholds for bipartite networks

    NASA Astrophysics Data System (ADS)

    Hernández, D. G.; Risau-Gusman, S.

    2013-11-01

    It is well known that sexually transmitted diseases (STD) spread across a network of human sexual contacts. This network is most often bipartite, as most STD are transmitted between men and women. Even though network models in epidemiology have quite a long history now, there are few general results about bipartite networks. One of them is the simple dependence, predicted using the mean field approximation, between the epidemic threshold and the average and variance of the degree distribution of the network. Here we show that going beyond this approximation can lead to qualitatively different results that are supported by numerical simulations. One of the new features, that can be relevant for applications, is the existence of a critical value for the infectivity of each population, below which no epidemics can arise, regardless of the value of the infectivity of the other population.

  14. Inferring Passenger Denial Behavior of Taxi Drivers from Large-Scale Taxi Traces

    PubMed Central

    Zhang, Sihai; Wang, Zhiyang

    2016-01-01

    How to understand individual human actions is a fundamental question to modern science, which drives and incurs many social, technological, racial, religious and economic phenomena. Human dynamics tries to reveal the temporal pattern and internal mechanism of human actions in letter or electronic communications, from the perspective of continuous interactions among friends or acquaintances. For interactions between stranger to stranger, taxi industry provide fruitful phenomina and evidence to investigate the action decisions. In fact, one striking disturbing events commonly reported in taxi industry is passenger refusing or denial, whose reasons vary, including skin color, blind passenger, being a foreigner or too close destination, religion reasons and anti specific nationality, so that complaints about taxi passenger refusing have to be concerned and processed carefully by local governments. But more universal factors for this phenomena are of great significance, which might be fulfilled by big data research to obtain novel insights in this question. In this paper, we demonstrate the big data analytics application in revealing novel insights from massive taxi trace data, which, for the first time, validates the passengers denial in taxi industry and estimates the denial ratio in Beijing city. We first quantify the income differentiation facts among taxi drivers. Then we find out that choosing the drop-off places also contributes to the high income for taxi drivers, compared to the previous explanation of mobility intelligence. Moreover, we propose the pick-up, drop-off and grid diversity concepts and related diversity analysis suggest that, high income taxi drivers will deny passengers in some situations, so as to choose the passengers’ destination they prefer. Finally we design an estimation method for denial ratio and infer that high income taxi drivers will deny passengers with 8.52% likelihood in Beijing. Our work exhibits the power of big data analysis in

  15. 14 CFR 23.1383 - Taxi and landing lights.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 14 Aeronautics and Space 1 2012-01-01 2012-01-01 false Taxi and landing lights. 23.1383 Section 23... AIRWORTHINESS STANDARDS: NORMAL, UTILITY, ACROBATIC, AND COMMUTER CATEGORY AIRPLANES Equipment Lights § 23.1383 Taxi and landing lights. Each taxi and landing light must be designed and installed so that: (a)...

  16. 14 CFR 23.1383 - Taxi and landing lights.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 14 Aeronautics and Space 1 2014-01-01 2014-01-01 false Taxi and landing lights. 23.1383 Section 23... AIRWORTHINESS STANDARDS: NORMAL, UTILITY, ACROBATIC, AND COMMUTER CATEGORY AIRPLANES Equipment Lights § 23.1383 Taxi and landing lights. Each taxi and landing light must be designed and installed so that: (a)...

  17. 14 CFR 23.1383 - Taxi and landing lights.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 1 2011-01-01 2011-01-01 false Taxi and landing lights. 23.1383 Section 23... AIRWORTHINESS STANDARDS: NORMAL, UTILITY, ACROBATIC, AND COMMUTER CATEGORY AIRPLANES Equipment Lights § 23.1383 Taxi and landing lights. Each taxi and landing light must be designed and installed so that: (a)...

  18. 14 CFR 23.1383 - Taxi and landing lights.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 14 Aeronautics and Space 1 2013-01-01 2013-01-01 false Taxi and landing lights. 23.1383 Section 23... AIRWORTHINESS STANDARDS: NORMAL, UTILITY, ACROBATIC, AND COMMUTER CATEGORY AIRPLANES Equipment Lights § 23.1383 Taxi and landing lights. Each taxi and landing light must be designed and installed so that: (a)...

  19. 14 CFR 23.1383 - Taxi and landing lights.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Taxi and landing lights. 23.1383 Section 23... AIRWORTHINESS STANDARDS: NORMAL, UTILITY, ACROBATIC, AND COMMUTER CATEGORY AIRPLANES Equipment Lights § 23.1383 Taxi and landing lights. Each taxi and landing light must be designed and installed so that: (a)...

  20. Global stability of prey-taxis systems

    NASA Astrophysics Data System (ADS)

    Jin, Hai-Yang; Wang, Zhi-An

    2017-02-01

    In this paper, we prove the global boundedness and stability of the predator-prey system with prey-taxis in a two-dimensional bounded domain with Neumann boundary conditions. By deriving an entropy-like equality and a boundedness criterion, we show that the intrinsic interaction between predators and preys is sufficient to prevent the population overcrowding even the prey-taxis is included and strong. Furthermore, by constructing appropriate Lyapunov functionals, we show that prey-only steady state is globally asymptotically stable if the predation is weak, and the co-existence steady state is globally asymptotically stable under some conditions (like the prey-taxis is weak or the prey diffuses fast) if the predation is strong. The convergence rates of solutions to the steady states are derived in the paper.

  1. Continuous traveling waves for prey-taxis.

    PubMed

    Lee, J M; Hillen, T; Lewis, M A

    2008-04-01

    Spatially moving predators are often considered for biological control of invasive species. The question arises as to whether introduced predators are able to stop an advancing pest or foreign population. In recent studies of reaction-diffusion models, it has been shown that the prey invasion can only be stopped if the prey dynamics observes an Allee effect. In this paper, we include prey-taxis into the model. Prey-taxis describe the active movement of predators to regions of high prey density. This effect leads to the observation that predators are drawn away from the leading edge of a prey invasion where its density is low. This leads to counterintuitive result that prey-taxis can actually reduce the likelihood of effective biocontrol.

  2. Bipartite Graphs of Large Clique-Width

    NASA Astrophysics Data System (ADS)

    Korpelainen, Nicholas; Lozin, Vadim V.

    Recently, several constructions of bipartite graphs of large clique-width have been discovered in the literature. In the present paper, we propose a general framework for developing such constructions and use it to obtain new results on this topic.

  3. Generating tripartite nonlocality from bipartite resources

    NASA Astrophysics Data System (ADS)

    Su, Zhaofeng

    2017-01-01

    Nonlocality is an important resource for quantum information processing. Tripartite nonlocality is more difficult to produce in experiments than bipartite ones. In this paper, we analyze a simple setting to generate tripartite nonlocality from two classes of bipartite resources, namely two-qubit entangled pure states and Werner states. Upper bounds on the tripartite nonlocality, characterized by the maximal violation of Svetlichny inequalities, are given, and the optimal measurements to achieve these bounds are provided.

  4. Data Mechanics and Coupling Geometry on Binary Bipartite Networks

    PubMed Central

    Fushing, Hsieh; Chen, Chen

    2014-01-01

    We quantify the notion of pattern and formalize the process of pattern discovery under the framework of binary bipartite networks. Patterns of particular focus are interrelated global interactions between clusters on its row and column axes. A binary bipartite network is built into a thermodynamic system embracing all up-and-down spin configurations defined by product-permutations on rows and columns. This system is equipped with its ferromagnetic energy ground state under Ising model potential. Such a ground state, also called a macrostate, is postulated to congregate all patterns of interest embedded within the network data in a multiscale fashion. A new computing paradigm for indirect searching for such a macrostate, called Data Mechanics, is devised by iteratively building a surrogate geometric system with a pair of nearly optimal marginal ultrametrics on row and column spaces. The coupling measure minimizing the Gromov-Wasserstein distance of these two marginal geometries is also seen to be in the vicinity of the macrostate. This resultant coupling geometry reveals multiscale block pattern information that characterizes multiple layers of interacting relationships between clusters on row and on column axes. It is the nonparametric information content of a binary bipartite network. This coupling geometry is then demonstrated to shed new light and bring resolution to interaction issues in community ecology and in gene-content-based phylogenetics. Its implied global inferences are expected to have high potential in many scientific areas. PMID:25170903

  5. Taxis response of various denitrifying bacteria to nitrate and nitrite.

    PubMed

    Lee, Dong Yun; Ramos, Adela; Macomber, Lee; Shapleigh, James P

    2002-05-01

    The taxis response of Rhodobacter sphaeroides 2.4.1 and 2.4.3, Rhodopseudomonas palustris, and Agrobacterium tumefaciens to nitrate and nitrite was evaluated by observing the macroscopic behavior of cells suspended in soft agar and incubated under various conditions. R. sphaeroides 2.4.3, which is capable of both nitrate and nitrite reduction, showed a taxis response to both nitrate and nitrite. R. sphaeroides 2.4.1, which contains nitrate reductase but not nitrite reductase, did not show a taxis response towards either nitrogen oxide. Insertional inactivation of the nitrite reductase structural gene or its transcriptional regulator, NnrR, in strain 2.4.3 caused a loss of a taxis response towards both nitrate and nitrite. An isolate of 2.4.1 carrying a copy of the nitrite reductase gene from 2.4.3 showed a taxis response to both nitrogen oxides. The taxis response of 2.4.3 was observed under anaerobic conditions, suggesting that the taxis response was due to nitrate and nitrite respiration, not to inhibition of oxygen respiration by respiration of nitrogen oxides. Strain 2.4.3 showed a taxis response to nitrate and nitrite under photosynthetic and aerobic conditions. Changing the carbon source in the culture medium caused an unexpected subtle shift in the taxis response of 2.4.3 to nitrite. A taxis response to nitrogen oxides was also observed in R. palustris and A. tumefaciens. R. palustris exhibited a taxis response to nitrite but not to nitrate, while A. tumefaciens exhibited a response to both compounds.

  6. Taxis Response of Various Denitrifying Bacteria to Nitrate and Nitrite

    PubMed Central

    Lee, Dong Yun; Ramos, Adela; Macomber, Lee; Shapleigh, James P.

    2002-01-01

    The taxis response of Rhodobacter sphaeroides 2.4.1 and 2.4.3, Rhodopseudomonas palustris, and Agrobacterium tumefaciens to nitrate and nitrite was evaluated by observing the macroscopic behavior of cells suspended in soft agar and incubated under various conditions. R. sphaeroides 2.4.3, which is capable of both nitrate and nitrite reduction, showed a taxis response to both nitrate and nitrite. R. sphaeroides 2.4.1, which contains nitrate reductase but not nitrite reductase, did not show a taxis response towards either nitrogen oxide. Insertional inactivation of the nitrite reductase structural gene or its transcriptional regulator, NnrR, in strain 2.4.3 caused a loss of a taxis response towards both nitrate and nitrite. An isolate of 2.4.1 carrying a copy of the nitrite reductase gene from 2.4.3 showed a taxis response to both nitrogen oxides. The taxis response of 2.4.3 was observed under anaerobic conditions, suggesting that the taxis response was due to nitrate and nitrite respiration, not to inhibition of oxygen respiration by respiration of nitrogen oxides. Strain 2.4.3 showed a taxis response to nitrate and nitrite under photosynthetic and aerobic conditions. Changing the carbon source in the culture medium caused an unexpected subtle shift in the taxis response of 2.4.3 to nitrite. A taxis response to nitrogen oxides was also observed in R. palustris and A. tumefaciens. R. palustris exhibited a taxis response to nitrite but not to nitrate, while A. tumefaciens exhibited a response to both compounds. PMID:11976082

  7. 49 CFR 37.29 - Private entities providing taxi service.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 1 2013-10-01 2013-10-01 false Private entities providing taxi service. 37.29 Section 37.29 Transportation Office of the Secretary of Transportation TRANSPORTATION SERVICES FOR INDIVIDUALS WITH DISABILITIES (ADA) Applicability § 37.29 Private entities providing taxi service....

  8. 49 CFR 37.29 - Private entities providing taxi service.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 49 Transportation 1 2012-10-01 2012-10-01 false Private entities providing taxi service. 37.29 Section 37.29 Transportation Office of the Secretary of Transportation TRANSPORTATION SERVICES FOR INDIVIDUALS WITH DISABILITIES (ADA) Applicability § 37.29 Private entities providing taxi service....

  9. 49 CFR 37.29 - Private entities providing taxi service.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 49 Transportation 1 2014-10-01 2014-10-01 false Private entities providing taxi service. 37.29 Section 37.29 Transportation Office of the Secretary of Transportation TRANSPORTATION SERVICES FOR INDIVIDUALS WITH DISABILITIES (ADA) Applicability § 37.29 Private entities providing taxi service....

  10. 49 CFR 37.29 - Private entities providing taxi service.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 49 Transportation 1 2011-10-01 2011-10-01 false Private entities providing taxi service. 37.29 Section 37.29 Transportation Office of the Secretary of Transportation TRANSPORTATION SERVICES FOR INDIVIDUALS WITH DISABILITIES (ADA) Applicability § 37.29 Private entities providing taxi service....

  11. 49 CFR 37.29 - Private entities providing taxi service.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 49 Transportation 1 2010-10-01 2010-10-01 false Private entities providing taxi service. 37.29 Section 37.29 Transportation Office of the Secretary of Transportation TRANSPORTATION SERVICES FOR INDIVIDUALS WITH DISABILITIES (ADA) Applicability § 37.29 Private entities providing taxi service....

  12. Bipartite graph partitioning and data clustering

    SciTech Connect

    Zha, Hongyuan; He, Xiaofeng; Ding, Chris; Gu, Ming; Simon, Horst D.

    2001-05-07

    Many data types arising from data mining applications can be modeled as bipartite graphs, examples include terms and documents in a text corpus, customers and purchasing items in market basket analysis and reviewers and movies in a movie recommender system. In this paper, the authors propose a new data clustering method based on partitioning the underlying biopartite graph. The partition is constructed by minimizing a normalized sum of edge weights between unmatched pairs of vertices of the bipartite graph. They show that an approximate solution to the minimization problem can be obtained by computing a partial singular value decomposition (SVD) of the associated edge weight matrix of the bipartite graph. They point out the connection of their clustering algorithm to correspondence analysis used in multivariate analysis. They also briefly discuss the issue of assigning data objects to multiple clusters. In the experimental results, they apply their clustering algorithm to the problem of document clustering to illustrate its effectiveness and efficiency.

  13. Stochastic models for cell motion and taxis.

    PubMed

    Ionides, Edward L; Fang, Kathy S; Isseroff, R Rivkah; Oster, George F

    2004-01-01

    Certain biological experiments investigating cell motion result in time lapse video microscopy data which may be modeled using stochastic differential equations. These models suggest statistics for quantifying experimental results and testing relevant hypotheses, and carry implications for the qualitative behavior of cells and for underlying biophysical mechanisms. Directional cell motion in response to a stimulus, termed taxis, has previously been modeled at a phenomenological level using the Keller-Segel diffusion equation. The Keller-Segel model cannot distinguish certain modes of taxis, and this motivates the introduction of a richer class of models which is nevertheless still amenable to statistical analysis. A state space model formulation is used to link models proposed for cell velocity to observed data. Sequential Monte Carlo methods enable parameter estimation via maximum likelihood for a range of applicable models. One particular experimental situation, involving the effect of an electric field on cell behavior, is considered in detail. In this case, an Ornstein- Uhlenbeck model for cell velocity is found to compare favorably with a nonlinear diffusion model.

  14. Outlier Detection through Bipartite Visual Analytics.

    PubMed

    Bhavnani, Suresh K; Drake, Justin A; Dang, Bryant; Vishweswaran, Shyam

    2013-01-01

    A critical goal of outlier detection is to determine whether an outlying value was caused by experimental/human error, or by natural biological diversity. However, because univariate or multivariate methods (e.g., box plots and principle component analysis) typically used for outlier detection use unipartite representations, they cannot distinguish whether outliers across a set of variables represent, for example, a single patient or different patients. Here we propose a bipartite visual analytical approach to outlier detection, and demonstrate its usefulness for identifying complex bipartite outliers in a dataset of rickettsioses patients, which enabled domain experts to determine whether the outliers were caused by errors, or by biological diversity.

  15. Bipartite memory network architectures for parallel processing

    SciTech Connect

    Smith, W.; Kale, L.V. . Dept. of Computer Science)

    1990-01-01

    Parallel architectures are boradly classified as either shared memory or distributed memory architectures. In this paper, the authors propose a third family of architectures, called bipartite memory network architectures. In this architecture, processors and memory modules constitute a bipartite graph, where each processor is allowed to access a small subset of the memory modules, and each memory module allows access from a small set of processors. The architecture is particularly suitable for computations requiring dynamic load balancing. The authors explore the properties of this architecture by examining the Perfect Difference set based topology for the graph. Extensions of this topology are also suggested.

  16. Entanglement rates for bipartite open systems

    NASA Astrophysics Data System (ADS)

    Vershynina, Anna

    2015-08-01

    We provide an upper bound on the maximal rate at which irreversible quantum dynamics can generate entanglement in a bipartite system. The generator of irreversible dynamics consists of a Hamiltonian and dissipative terms in Lindblad form. The relative entropy of entanglement is chosen as a measure of entanglement in an ancilla-free system. We provide an upper bound on the entangling rate which has a logarithmic dependence on a dimension of a smaller system in a bipartite cut. We also investigate the rate of change of quantum mutual information in an ancilla-assisted system and provide an upper bound independent of dimension of ancillas.

  17. Thermalization of Bipartite Bose-Hubbard Models.

    PubMed

    Khripkov, Christine; Cohen, Doron; Vardi, Amichay

    2016-05-19

    We study the time evolution of a bipartite Bose-Hubbard model prepared far from equilibrium. When the classical dynamics is chaotic, we observe ergodization of the number distribution and a constant increase of the entanglement entropy between the constituent subsystems until it saturates to thermal equilibrium values. No thermalization is obtained when the system is launched in quasi-integrable phase space regions.

  18. Multicommunity weight-driven bipartite network model

    NASA Astrophysics Data System (ADS)

    Fan, H.; Wang, Z.; Ohnishi, T.; Saito, H.; Aihara, K.

    2008-08-01

    Community structure and rewiring phenomena exist in many complex networks, particularly in bipartite networks. We construct a model for the degree distribution of the rewiring problem in a multicommunity weight-driven bipartite network (MCWBN). The network consists of many interconnected communities, each of which holds a bipartite graph. The bipartite graph consists of two sets of nodes. We name each node in one set a “producer” and each node in the other set a “consumer.” A weight value matrix defining the trade barrier between any two communities is used to characterize the structure of the communities, which ensures the higher preferential attachment probability in intracommunity than in intercommunity. The size of one producer is defined as the number of consumers connected to it. We find that the nonlinear dynamics of the scale of production, or the total size of all producers in each community is dependent only on the initial scale of production in each community, and independent of the distribution of the producer size. Furthermore, if the nonlinear system of the scale of production in each community is at an equilibrium state, the distribution of the producer size in each community of the MCWBN model is equivalent to that in a one-community model.

  19. Three types of taxis used in the response of Acidovorax sp. strain JS42 to 2-nitrotoluene.

    PubMed

    Rabinovitch-Deere, Christine A; Parales, Rebecca E

    2012-04-01

    Acidovorax sp. strain JS42 is able to utilize 2-nitrotoluene (2NT) as its sole carbon, nitrogen, and energy source. We report here that strain JS42 is chemotactic to 2NT and that the response is increased when cells are grown on compounds such as 2NT that are known to induce the first step of 2NT degradation. Assays with JS42 mutants unable to oxidize 2NT showed that the first step of 2NT metabolism was required for the induced response, but not for a portion of the constitutive response, indicating that 2NT itself is an attractant. The 2NT metabolite nitrite was shown to be a strong attractant for strain JS42, and sufficient nitrite was produced during the taxis assay to account for a large part of the induced response. A mutant with an inactivated ntdY gene, which is located adjacent to the 2NT degradation genes and codes for a putative methyl-accepting chemotaxis protein, showed a defect in taxis toward 2NT that may involve a reduced response to nitrite. Responses of a mutant defective for the energy-taxis receptor, Aer, indicated that a functional aer gene is required for a substantial part of the wild-type induced response to 2NT. In summary, strain JS42 utilizes three types of taxis to sense and respond to 2NT: constitutive 2NT-specific chemotaxis to directly sense 2NT, metabolism-dependent nitrite-specific chemotaxis that may be mediated by NtdY, and energy taxis mediated by Aer.

  20. Three Types of Taxis Used in the Response of Acidovorax sp. Strain JS42 to 2-Nitrotoluene

    PubMed Central

    Rabinovitch-Deere, Christine A.

    2012-01-01

    Acidovorax sp. strain JS42 is able to utilize 2-nitrotoluene (2NT) as its sole carbon, nitrogen, and energy source. We report here that strain JS42 is chemotactic to 2NT and that the response is increased when cells are grown on compounds such as 2NT that are known to induce the first step of 2NT degradation. Assays with JS42 mutants unable to oxidize 2NT showed that the first step of 2NT metabolism was required for the induced response, but not for a portion of the constitutive response, indicating that 2NT itself is an attractant. The 2NT metabolite nitrite was shown to be a strong attractant for strain JS42, and sufficient nitrite was produced during the taxis assay to account for a large part of the induced response. A mutant with an inactivated ntdY gene, which is located adjacent to the 2NT degradation genes and codes for a putative methyl-accepting chemotaxis protein, showed a defect in taxis toward 2NT that may involve a reduced response to nitrite. Responses of a mutant defective for the energy-taxis receptor, Aer, indicated that a functional aer gene is required for a substantial part of the wild-type induced response to 2NT. In summary, strain JS42 utilizes three types of taxis to sense and respond to 2NT: constitutive 2NT-specific chemotaxis to directly sense 2NT, metabolism-dependent nitrite-specific chemotaxis that may be mediated by NtdY, and energy taxis mediated by Aer. PMID:22286989

  1. Dirac plasmons in bipartite lattices of metallic nanoparticles

    NASA Astrophysics Data System (ADS)

    Jebb Sturges, Thomas; Woollacott, Claire; Weick, Guillaume; Mariani, Eros

    2015-03-01

    We study theoretically ‘graphene-like’ plasmonic metamaterials constituted by two-dimensional arrays of metallic nanoparticles, including perfect honeycomb structures with and without inversion symmetry, as well as generic bipartite lattices. The dipolar interactions between localized surface plasmons (LSPs) in different nanoparticles gives rise to collective plasmons (CPs) that extend over the whole lattice. We study the band structure of CPs and unveil its tunability with the orientation of the dipole moments associated with the LSPs. Depending on the dipole orientation, we identify a phase diagram of gapless or gapped phases in the CP dispersion. We show that the gapless phases in the phase diagram are characterized by CPs behaving as massless chiral Dirac particles, in analogy with electrons in graphene. When the inversion symmetry of the honeycomb structure is broken, CPs are described as gapped chiral Dirac modes with an energy-dependent Berry phase. We further relax the geometric symmetry of the honeycomb structure by analysing generic bipartite hexagonal lattices. In this case we study the evolution of the phase diagram and unveil the emergence of a sequence of topological phase transitions when one hexagonal sublattice is progressively shifted with respect to the other.

  2. [Comparative life cycle environmental assessment between electric taxi and gasoline taxi in Beijing].

    PubMed

    Shi, Xiao-Qing; Sun, Zhao-Xin; Li, Xiao-Nuo; Li, Jin-Xiang; Yang, Jian-Xin

    2015-03-01

    Tailpipe emission of internal combustion engine vehicle (ICEV) is one of the main sources leading to atmospheric environmental problems such as haze. Substituting electric vehicles for conventional gasoline vehicles is an important solution for reducing urban air pollution. In 2011, as a pilot city of electric vehicle, Beijing launched a promotion plan of electric vehicle. In order to compare the environmental impacts between Midi electric vehicle (Midi EV) and Hyundai gasoline taxi (ICEV), this study created an inventory with local data and well-reasoned assumptions, and contributed a life cycle assessment (LCA) model with GaBi4.4 software and comparative life cycle environmental assessment by Life cycle impact analysis models of CML2001(Problem oriented) and EI99 (Damage oriented), which included the environmental impacts of full life cycle, manufacture phase, use phase and end of life. The sensitivity analysis of lifetime mileage and power structure was also provided. The results indicated that the full life cycle environmental impact of Midi EV was smaller than Hyundai ICEV, which was mainly due to the lower fossil fuel consumption. On the contrary, Midi EV exhibited the potential of increasing the environmental impacts of ecosystem quality influence and Human health influence. By CML2001 model, the results indicated that Midi EV might decrease the impact of Abiotic Depletion Potential, Global Warming Potential, Ozone Layer Depletion Potential and so on. However, in the production phase, the impact of Abiotic Depletion Potential, Acidification Potential, Eutrophication Potential, Global Warming Potential, Photochemical Ozone Creation Potential, Ozone Layer Depletion Potential, Marine Aquatic Ecotoxicity Potential, Terrestric Ecotoxicity Potential, Human Toxicity Potential of Midi EV were increased relative to Hyundai ICEV because of emissions impacts from its power system especially the battery production. Besides, in the use phase, electricity production was

  3. An evolving model of online bipartite networks

    NASA Astrophysics Data System (ADS)

    Zhang, Chu-Xu; Zhang, Zi-Ke; Liu, Chuang

    2013-12-01

    Understanding the structure and evolution of online bipartite networks is a significant task since they play a crucial role in various e-commerce services nowadays. Recently, various attempts have been tried to propose different models, resulting in either power-law or exponential degree distributions. However, many empirical results show that the user degree distribution actually follows a shifted power-law distribution, the so-called Mandelbrot’s law, which cannot be fully described by previous models. In this paper, we propose an evolving model, considering two different user behaviors: random and preferential attachment. Extensive empirical results on two real bipartite networks, Delicious and CiteULike, show that the theoretical model can well characterize the structure of real networks for both user and object degree distributions. In addition, we introduce a structural parameter p, to demonstrate that the hybrid user behavior leads to the shifted power-law degree distribution, and the region of power-law tail will increase with the increment of p. The proposed model might shed some lights in understanding the underlying laws governing the structure of real online bipartite networks.

  4. Building versatile bipartite probes for quantum metrology

    NASA Astrophysics Data System (ADS)

    Farace, Alessandro; De Pasquale, Antonella; Adesso, Gerardo; Giovannetti, Vittorio

    2016-01-01

    We consider bipartite systems as versatile probes for the estimation of transformations acting locally on one of the subsystems. We investigate what resources are required for the probes to offer a guaranteed level of metrological performance, when the latter is averaged over specific sets of local transformations. We quantify such a performance via the average skew information (AvSk), a convex quantity which we compute in closed form for bipartite states of arbitrary dimensions, and which is shown to be strongly dependent on the degree of local purity of the probes. Our analysis contrasts and complements the recent series of studies focused on the minimum, rather than the average, performance of bipartite probes in local estimation tasks, which was instead determined by quantum correlations other than entanglement. We provide explicit prescriptions to characterize the most reliable states maximizing the AvSk, and elucidate the role of state purity, separability and correlations in the classification of optimal probes. Our results can help in the identification of useful resources for sensing, estimation and discrimination applications when complete knowledge of the interaction mechanism realizing the local transformation is unavailable, and access to pure entangled probes is technologically limited.

  5. TAXI Direct-to-Disk Interface Demultiplexes Proprietarily Formatted Data

    NASA Technical Reports Server (NTRS)

    Newnan, Bruce G.; Ahlport, Steven F.

    2001-01-01

    The TAXI Direct-to-Disk interface is a special-purpose interface circuit for demultiplexing of data from a Racal Storeplex (or equivalent) multichannel recorder onto one or more hard disks that reside in, and/or are controlled by, a personal computer (PC). (The name TAXI as used here is derived from the acronym TAXI, which signifies transparent asynchronous transceiver interface.) The TAXI Direct-to-Disk interface was developed for original use in capturing data from instrumentation on a test stand in a NASA rocket-testing facility. The control, data-recording, and data-postprocessing equipment of the facility are located in a control room at a safe distance from the test stand. Heretofore, the transfer of data from the instrumentation to the postprocessing equipment has entailed post-test downloading via software, requiring many hours to days of post-test reduction before the data could be viewed in a channelized format. The installation of the TAXI Direct-to-Disk interface, in conjunction with other modifications, causes the transfer of data to take place in real time, so that the data are immediately available for review during or after the test. The instrumentation is connected to the input terminals of the signal-processing unit of multichannel recorder by standard coaxial cables. The coaxial output of the signal processing unit is converted to fiber-optic output by means of a commercial coaxial-cable/fiber-optic converter (that is, a fiber-optic transceiver) designed specifically for this application. The fiber-optic link carries the data signals to an identical fiber-optic transceiver in the control room. On the way to the TAXI Direct-to-Disk interface that is the focus of this article, the data signals are processed through a companion special purpose circuit denoted by the similar name parallel TAXI interface.

  6. pH-Taxis of Biohybrid Microsystems

    NASA Astrophysics Data System (ADS)

    Zhuang, Jiang; Wright Carlsen, Rika; Sitti, Metin

    2015-06-01

    The last decade has seen an increasing number of studies developing bacteria and other cell-integrated biohybrid microsystems. However, the highly stochastic motion of these microsystems severely limits their potential use. Here, we present a method that exploits the pH sensing of flagellated bacteria to realize robust drift control of multi-bacteria propelled microrobots. Under three specifically configured pH gradients, we demonstrate that the microrobots exhibit both unidirectional and bidirectional pH-tactic behaviors, which are also observed in free-swimming bacteria. From trajectory analysis, we find that the swimming direction and speed biases are two major factors that contribute to their tactic drift motion. The motion analysis of microrobots also sheds light on the propulsion dynamics of the flagellated bacteria as bioactuators. It is expected that similar driving mechanisms are shared among pH-taxis, chemotaxis, and thermotaxis. By identifying the mechanism that drives the tactic behavior of bacteria-propelled microsystems, this study opens up an avenue towards improving the control of biohybrid microsystems. Furthermore, assuming that it is possible to tune the preferred pH of bioactuators by genetic engineering, these biohybrid microsystems could potentially be applied to sense the pH gradient induced by cancerous cells in stagnant fluids inside human body and realize targeted drug delivery.

  7. pH-Taxis of Biohybrid Microsystems

    PubMed Central

    Zhuang, Jiang; Wright Carlsen, Rika; Sitti, Metin

    2015-01-01

    The last decade has seen an increasing number of studies developing bacteria and other cell-integrated biohybrid microsystems. However, the highly stochastic motion of these microsystems severely limits their potential use. Here, we present a method that exploits the pH sensing of flagellated bacteria to realize robust drift control of multi-bacteria propelled microrobots. Under three specifically configured pH gradients, we demonstrate that the microrobots exhibit both unidirectional and bidirectional pH-tactic behaviors, which are also observed in free-swimming bacteria. From trajectory analysis, we find that the swimming direction and speed biases are two major factors that contribute to their tactic drift motion. The motion analysis of microrobots also sheds light on the propulsion dynamics of the flagellated bacteria as bioactuators. It is expected that similar driving mechanisms are shared among pH-taxis, chemotaxis, and thermotaxis. By identifying the mechanism that drives the tactic behavior of bacteria-propelled microsystems, this study opens up an avenue towards improving the control of biohybrid microsystems. Furthermore, assuming that it is possible to tune the preferred pH of bioactuators by genetic engineering, these biohybrid microsystems could potentially be applied to sense the pH gradient induced by cancerous cells in stagnant fluids inside human body and realize targeted drug delivery. PMID:26073316

  8. Tu-144LL ramp taxi and takeoff

    NASA Technical Reports Server (NTRS)

    1998-01-01

    A jointly funded activity by the NASA High Speed Research (HSR) program and the Boeing Commercial Airplane Group took place to obtain experimental flight data on the Tu-144 supersonic transport built by Russia. The Tu-144 was modified by the Tupolev Aircraft Design Bureau, Moscow, Russia, in 1995-1996 into the Tu-144LL Flying Laboratory to perform flight experiments as part of the NASA HSR Program. Knowledge gained from the flights will benefit the NASA efforts to develop technology that may enable design of an efficient, environmentally friendly second-generation supersonic transport in this country. This program involved eight experiments -- six aboard the aircraft and two ground test engine experiments. Between November 1996 and February 1998 the Tu-144LL flew 19 research flights. The follow-on Tu-144LL program encompassed about eight flights, focusing on extensions of five experiments from the first project and two new experiments to measure fuel system temperatures and to define in-flight wing deflections. This 31-second clip shows the Russian Tu-144 LL supersonic transport on the ramp in Moscow, then taxiing into position and making its takeoff run, rotating from the runway and climbing away.

  9. Schmidt number of bipartite and multipartite states under local projections

    NASA Astrophysics Data System (ADS)

    Chen, Lin; Yang, Yu; Tang, Wai-Shing

    2017-03-01

    The Schmidt number is a fundamental parameter characterizing the properties of quantum states, and local projections are fundamental operations in quantum physics. We investigate the relation between the Schmidt numbers of bipartite states and their projected states. We show that there exist bipartite positive partial transpose entangled states of any given Schmidt number. We further construct the notion of joint Schmidt number for multipartite states and explore its relation with the Schmidt number of bipartite reduced density operators.

  10. Drosophila photo-taxis and odor-taxis are mediated by a shared computational pathway

    NASA Astrophysics Data System (ADS)

    Mihovilovic Skanata, Mirna; Gepner, Ruben; Bernat, Natalie; Kaplow, Margarita; Gershow, Marc

    In natural environments, the Drosophila larva makes navigational decisions based on variable and conflicting sensory inputs. How larvae respond to multi-modal stimuli and how their neural circuits integrate and prioritize multi-sensory information remains unknown. To identify larval navigational computations we developed a high-throughput reverse-correlation assay. We provided larvae with visual and optogenetically induced fictive olfactory stimuli and measured the correlation between the presented stimulus and evoked turn decisions. We used this technique to fit parameters of a Linear-Nonlinear-Poisson model describing computations underlying turn decisions. For uni-modal inputs, the parameterized model allowed us to predict the behavior of populations of larvae responding to novel stimulus presentations. For multi-modal inputs, our assay showed that larvae linearly combine olfactory and visual signals upstream of the decision to turn. We verified this prediction using controlled combinations of stimuli. We studied other navigational decisions that determine the size and directions of turns and found that larvae integrated odor and light according to the same rule in all cases. These results suggest that photo-taxis and odor-taxis are mediated by a shared computational pathway.

  11. Uncovering urban human mobility from large scale taxi GPS data

    NASA Astrophysics Data System (ADS)

    Tang, Jinjun; Liu, Fang; Wang, Yinhai; Wang, Hua

    2015-11-01

    Taxi GPS trajectories data contain massive spatial and temporal information of urban human activity and mobility. Taking taxi as mobile sensors, the information derived from taxi trips benefits the city and transportation planning. The original data used in study are collected from more than 1100 taxi drivers in Harbin city. We firstly divide the city area into 400 different transportation districts and analyze the origin and destination distribution in urban area on weekday and weekend. The Density-Based Spatial Clustering of Applications with Noise (DBSCAN) algorithm is used to cluster pick-up and drop-off locations. Furthermore, four spatial interaction models are calibrated and compared based on trajectories in shopping center of Harbin city to study the pick-up location searching behavior. By extracting taxi trips from GPS data, travel distance, time and average speed in occupied and non-occupied status are then used to investigate human mobility. Finally, we use observed OD matrix of center area in Harbin city to model the traffic distribution patterns based on entropy-maximizing method, and the estimation performance verify its effectiveness in case study.

  12. Mining spatiotemporal patterns of urban dwellers from taxi trajectory data

    NASA Astrophysics Data System (ADS)

    Mao, Feng; Ji, Minhe; Liu, Ting

    2016-06-01

    With the widespread adoption of locationaware technology, obtaining long-sequence, massive and high-accuracy spatiotemporal trajectory data of individuals has become increasingly popular in various geographic studies. Trajectory data of taxis, one of the most widely used inner-city travel modes, contain rich information about both road network traffic and travel behavior of passengers. Such data can be used to study the microscopic activity patterns of individuals as well as the macro system of urban spatial structures. This paper focuses on trajectories obtained from GPS-enabled taxis and their applications for mining urban commuting patterns. A novel approach is proposed to discover spatiotemporal patterns of household travel from the taxi trajectory dataset with a large number of point locations. The approach involves three critical steps: spatial clustering of taxi origin-destination (OD) based on urban traffic grids to discover potentially meaningful places, identifying threshold values from statistics of the OD clusters to extract urban jobs-housing structures, and visualization of analytic results to understand the spatial distribution and temporal trends of the revealed urban structures and implied household commuting behavior. A case study with a taxi trajectory dataset in Shanghai, China is presented to demonstrate and evaluate the proposed method.

  13. Hybrid Taxis Give Fuel Economy a Lift, Clean Cities, Fleet Experiences, April 2009 (Fact Sheet)

    SciTech Connect

    Not Available

    2009-04-01

    Clean Cities helped Boston, San Antonio, and Cambridge create hybrid taxi programs. The hybrid taxis are able to achieve about twice the gas mileage of a conventional taxi while helping cut gasoline use and fuel costs. Tax credits and other incentives are helping both company owners and drivers make the switch to hybrids. Program leaders have learned some important lessons other cities can benefit from including learning a city's taxi structure, relaying benefits to drivers, and understanding the needs of owners.

  14. 14 CFR 298.21 - Filing for registration by air taxi operators.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... operators. 298.21 Section 298.21 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION... Registration for Exemption by Air Taxi Operators § 298.21 Filing for registration by air taxi operators. (a) Every air taxi operator who plans to commence operations under this part shall register with...

  15. 14 CFR 298.21 - Filing for registration by air taxi operators.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... operators. 298.21 Section 298.21 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION... Registration for Exemption by Air Taxi Operators § 298.21 Filing for registration by air taxi operators. (a) Every air taxi operator who plans to commence operations under this part shall register with...

  16. 14 CFR 298.21 - Filing for registration by air taxi operators.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... operators. 298.21 Section 298.21 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION... Registration for Exemption by Air Taxi Operators § 298.21 Filing for registration by air taxi operators. (a) Every air taxi operator who plans to commence operations under this part shall register with...

  17. 14 CFR 298.21 - Filing for registration by air taxi operators.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... operators. 298.21 Section 298.21 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION... Registration for Exemption by Air Taxi Operators § 298.21 Filing for registration by air taxi operators. (a) Every air taxi operator who plans to commence operations under this part shall register with...

  18. 14 CFR 298.21 - Filing for registration by air taxi operators.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... operators. 298.21 Section 298.21 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION... Registration for Exemption by Air Taxi Operators § 298.21 Filing for registration by air taxi operators. (a) Every air taxi operator who plans to commence operations under this part shall register with...

  19. 14 CFR 298.52 - Air taxi operations by commuter air carriers.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 4 2011-01-01 2011-01-01 false Air taxi operations by commuter air... (AVIATION PROCEEDINGS) ECONOMIC REGULATIONS EXEMPTIONS FOR AIR TAXI AND COMMUTER AIR CARRIER OPERATIONS Commuter Air Carrier Authorizations § 298.52 Air taxi operations by commuter air carriers. (a) A...

  20. 14 CFR 298.52 - Air taxi operations by commuter air carriers.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Air taxi operations by commuter air... (AVIATION PROCEEDINGS) ECONOMIC REGULATIONS EXEMPTIONS FOR AIR TAXI AND COMMUTER AIR CARRIER OPERATIONS Commuter Air Carrier Authorizations § 298.52 Air taxi operations by commuter air carriers. (a) A...

  1. Pilot Age and Error in Air-Taxi Crashes

    PubMed Central

    Rebok, George W.; Qiang, Yandong; Baker, Susan P.; Li, Guohua

    2010-01-01

    Introduction The associations of pilot error with the type of flight operations and basic weather conditions are well documented. The correlation between pilot characteristics and error is less clear. This study aims to examine whether pilot age is associated with the prevalence and patterns of pilot error in air-taxi crashes. Methods Investigation reports from the National Transportation Safety Board for crashes involving non-scheduled Part 135 operations (i.e., air taxis) in the United States between 1983 and 2002 were reviewed to identify pilot error and other contributing factors. Crash circumstances and the presence and type of pilot error were analyzed in relation to pilot age using Chi-square tests. Results Of the 1751 air-taxi crashes studied, 28% resulted from mechanical failure, 25% from loss of control at landing or takeoff, 7% from visual flight rule conditions into instrument meteorological conditions, 7% from fuel starvation, 5% from taxiing, and 28% from other causes. Crashes among older pilots were more likely to occur during the daytime rather than at night and off airport than on airport. The patterns of pilot error in air-taxi crashes were similar across age groups. Of the errors identified, 27% were flawed decisions, 26% were inattentiveness, 23% mishandled aircraft kinetics, 15% mishandled wind and/or runway conditions, and 11% were others. Conclusions Pilot age is associated with crash circumstances but not with the prevalence and patterns of pilot error in air-taxi crashes. Lack of age-related differences in pilot error may be attributable to the “safe worker effect.” PMID:19601508

  2. Expanding the definition of the classical bipartite nuclear localization signal.

    PubMed

    Lange, Allison; McLane, Laura M; Mills, Ryan E; Devine, Scott E; Corbett, Anita H

    2010-03-01

    Nuclear localization signals (NLSs) are amino acid sequences that target cargo proteins into the nucleus. Rigorous characterization of NLS motifs is essential to understanding and predicting pathways for nuclear import. The best-characterized NLS is the classical NLS (cNLS), which is recognized by the cNLS receptor, importin-alpha. cNLSs are conventionally defined as having one (monopartite) or two clusters of basic amino acids separated by a 9-12 aa linker (bipartite). Motivated by the finding that Ty1 integrase, which contains an unconventional putative bipartite cNLS with a 29 aa linker, exploits the classical nuclear import machinery, we assessed the functional boundaries for linker length within a bipartite cNLS. We confirmed that the integrase cNLS is a bona fide bipartite cNLS, then carried out a systematic analysis of linker length in an obligate bipartite cNLS cargo, which revealed that some linkers longer than conventionally defined can function in nuclear import. Linker function is dependent on the sequence and likely the inherent flexibility of the linker. Subsequently, we interrogated the Saccharomyces cerevisiae proteome to identify cellular proteins containing putative long bipartite cNLSs. We experimentally confirmed that Rrp4 contains a bipartite cNLS with a 25 aa linker. Our studies show that the traditional definition of bipartite cNLSs is too restrictive and linker length can vary depending on amino acid composition.

  3. Statistically Validated Networks in Bipartite Complex Systems

    PubMed Central

    Tumminello, Michele; Miccichè, Salvatore; Lillo, Fabrizio; Piilo, Jyrki; Mantegna, Rosario N.

    2011-01-01

    Many complex systems present an intrinsic bipartite structure where elements of one set link to elements of the second set. In these complex systems, such as the system of actors and movies, elements of one set are qualitatively different than elements of the other set. The properties of these complex systems are typically investigated by constructing and analyzing a projected network on one of the two sets (for example the actor network or the movie network). Complex systems are often very heterogeneous in the number of relationships that the elements of one set establish with the elements of the other set, and this heterogeneity makes it very difficult to discriminate links of the projected network that are just reflecting system's heterogeneity from links relevant to unveil the properties of the system. Here we introduce an unsupervised method to statistically validate each link of a projected network against a null hypothesis that takes into account system heterogeneity. We apply the method to a biological, an economic and a social complex system. The method we propose is able to detect network structures which are very informative about the organization and specialization of the investigated systems, and identifies those relationships between elements of the projected network that cannot be explained simply by system heterogeneity. We also show that our method applies to bipartite systems in which different relationships might have different qualitative nature, generating statistically validated networks in which such difference is preserved. PMID:21483858

  4. Reaction-contingency based bipartite Boolean modelling

    PubMed Central

    2013-01-01

    Background Intracellular signalling systems are highly complex, rendering mathematical modelling of large signalling networks infeasible or impractical. Boolean modelling provides one feasible approach to whole-network modelling, but at the cost of dequantification and decontextualisation of activation. That is, these models cannot distinguish between different downstream roles played by the same component activated in different contexts. Results Here, we address this with a bipartite Boolean modelling approach. Briefly, we use a state oriented approach with separate update rules based on reactions and contingencies. This approach retains contextual activation information and distinguishes distinct signals passing through a single component. Furthermore, we integrate this approach in the rxncon framework to support automatic model generation and iterative model definition and validation. We benchmark this method with the previously mapped MAP kinase network in yeast, showing that minor adjustments suffice to produce a functional network description. Conclusions Taken together, we (i) present a bipartite Boolean modelling approach that retains contextual activation information, (ii) provide software support for automatic model generation, visualisation and simulation, and (iii) demonstrate its use for iterative model generation and validation. PMID:23835289

  5. Adaptive bipartite consensus on coopetition networks

    NASA Astrophysics Data System (ADS)

    Hu, Jiangping; Zhu, Hong

    2015-07-01

    In this paper, a bipartite consensus tracking problem is considered for a group of autonomous agents on a coopetition network, on which the agents interact cooperatively and competitively simultaneously. The coopetition network involves positive and negative edges and is conveniently modeled by a signed graph. Additionally, the dynamics of all the agents are subjected to unknown disturbances, which are represented by linearly parameterized models. An adaptive estimation scheme is designed for each agent by virtue of the relative position measurements and the relative velocity measurements from its neighbors. Then a consensus tracking law is proposed for a new distributed system, which uses the relative measurements as the new state variables. The convergence of the consensus tracking error and the parameter estimation are analyzed even when the coopetition network is time-varying and no more global information about the bounds of the unknown disturbances is available to all the agents. Finally, some simulation results are provided to demonstrate the formation of the bipartite consensus on the coopetition network.

  6. Improved community detection in weighted bipartite networks

    PubMed Central

    2016-01-01

    Real-world complex networks are composed of non-random quantitative interactions. Identifying communities of nodes that tend to interact more with each other than the network as a whole is a key research focus across multiple disciplines, yet many community detection algorithms only use information about the presence or absence of interactions between nodes. Weighted modularity is a potential method for evaluating the quality of community partitions in quantitative networks. In this framework, the optimal community partition of a network can be found by searching for the partition that maximizes modularity. Attempting to find the partition that maximizes modularity is a computationally hard problem requiring the use of algorithms. QuanBiMo is an algorithm that has been proposed to maximize weighted modularity in bipartite networks. This paper introduces two new algorithms, LPAwb+ and DIRTLPAwb+, for maximizing weighted modularity in bipartite networks. LPAwb+ and DIRTLPAwb+ robustly identify partitions with high modularity scores. DIRTLPAwb+ consistently matched or outperformed QuanBiMo, while the speed of LPAwb+ makes it an attractive choice for detecting the modularity of larger networks. Searching for modules using weighted data (rather than binary data) provides a different and potentially insightful method for evaluating network partitions. PMID:26909160

  7. 77 FR 20789 - Work Group on Measuring Systems for Taxis

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-06

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF COMMERCE National Institute of Standards and Technology Work Group on Measuring Systems for Taxis AGENCY: National... Standards and Technology (NIST) is forming a Work Group (WG) to develop proposals to revise the...

  8. 14 CFR 25.491 - Taxi, takeoff and landing roll.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... AIRCRAFT AIRWORTHINESS STANDARDS: TRANSPORT CATEGORY AIRPLANES Structure Ground Loads § 25.491 Taxi, takeoff and landing roll. Within the range of appropriate ground speeds and approved weights, the airplane... aircraft is operating over the roughest ground that may reasonably be expected in normal operation....

  9. 14 CFR 25.491 - Taxi, takeoff and landing roll.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... AIRCRAFT AIRWORTHINESS STANDARDS: TRANSPORT CATEGORY AIRPLANES Structure Ground Loads § 25.491 Taxi, takeoff and landing roll. Within the range of appropriate ground speeds and approved weights, the airplane... aircraft is operating over the roughest ground that may reasonably be expected in normal operation....

  10. 14 CFR 25.491 - Taxi, takeoff and landing roll.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... AIRCRAFT AIRWORTHINESS STANDARDS: TRANSPORT CATEGORY AIRPLANES Structure Ground Loads § 25.491 Taxi, takeoff and landing roll. Within the range of appropriate ground speeds and approved weights, the airplane... aircraft is operating over the roughest ground that may reasonably be expected in normal operation....

  11. 14 CFR 25.491 - Taxi, takeoff and landing roll.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ..., takeoff and landing roll. Within the range of appropriate ground speeds and approved weights, the airplane structure and landing gear are assumed to be subjected to loads not less than those obtained when the... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Taxi, takeoff and landing roll....

  12. 14 CFR 25.491 - Taxi, takeoff and landing roll.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ..., takeoff and landing roll. Within the range of appropriate ground speeds and approved weights, the airplane structure and landing gear are assumed to be subjected to loads not less than those obtained when the... 14 Aeronautics and Space 1 2011-01-01 2011-01-01 false Taxi, takeoff and landing roll....

  13. Entanglement requirements for implementing bipartite unitary operations

    SciTech Connect

    Stahlke, Dan; Griffiths, Robert B.

    2011-09-15

    We prove, using a method based on map-state duality, lower bounds on entanglement resources needed to deterministically implement a bipartite unitary using separable (SEP) operations, which include LOCC (local operations and classical communication) as a particular case. It is known that the Schmidt rank of an entangled pure state resource cannot be less than the Schmidt rank of the unitary. We prove that if these ranks are equal the resource must be uniformly (maximally) entangled: equal nonzero Schmidt coefficients. Higher rank resources can have less entanglement: we have found numerical examples of Schmidt rank 2 unitaries, which can be deterministically implemented, by either SEP or LOCC, using an entangled resource of two qutrits with less than one ebit of entanglement.

  14. Disentanglement in bipartite continuous-variable systems

    SciTech Connect

    Barbosa, F. A. S.; Coelho, A. S.; Nussenzveig, P.; Martinelli, M.; Faria, A. J. de; Cassemiro, K. N.; Villar, A. S.

    2011-11-15

    Entanglement in bipartite continuous-variable systems is investigated in the presence of partial losses such as those introduced by a realistic quantum communication channel, e.g., by propagation in an optical fiber. We find that entanglement can vanish completely for partial losses, in a situation reminiscent of so-called entanglement sudden death. Even states with extreme squeezing may become separable after propagation in lossy channels. Having in mind the potential applications of such entangled light beams to optical communications, we investigate the conditions under which entanglement can survive for all partial losses. Different loss scenarios are examined, and we derive criteria to test the robustness of entangled states. These criteria are necessary and sufficient for Gaussian states. Our study provides a framework to investigate the robustness of continuous-variable entanglement in more complex multipartite systems.

  15. Verifying the Quantumness of Bipartite Correlations

    NASA Astrophysics Data System (ADS)

    Carmeli, Claudio; Heinosaari, Teiko; Karlsson, Antti; Schultz, Jussi; Toigo, Alessandro

    2016-06-01

    Entanglement is at the heart of most quantum information tasks, and therefore considerable effort has been made to find methods of deciding the entanglement content of a given bipartite quantum state. Here, we prove a fundamental limitation to deciding if an unknown state is entangled or not: we show that any quantum measurement which can answer this question for an arbitrary state necessarily gives enough information to identify the state completely. We also extend our treatment to other classes of correlated states by considering the problem of deciding if a state has negative partial transpose, is discordant, or is fully classically correlated. Remarkably, only the question related to quantum discord can be answered without resorting to full state tomography.

  16. Sexually Transmitted Diseases on Bipartite Graph

    NASA Astrophysics Data System (ADS)

    Wen, Luo-Sheng; Zhong, Jiang; Yang, Xiao-Fan

    2009-01-01

    We study the susceptible-infected-susceptible (SIS) epidemic model on bipartite graph. According to the difference of sex conception in western and oriental nations, we construct the Barabási Albert-Barabási Albert (BA-BA) model and Barabási-Albert Homogeneity (BA-HO) model for sexually transmitted diseases (STDs). Applying the rate equation approach, the positive equilibria of both models are given analytically. We find that the ratio between infected females and infected males is distinctly different in both models and the infected density in the BA-HO model is much less than that in the BA-BA model. These results explain that the countries with small ratio have less infected density than those with large ratio. Our numerical simulations verify these theoretical results.

  17. Detecting quantum critical points using bipartite fluctuations.

    PubMed

    Rachel, Stephan; Laflorencie, Nicolas; Song, H Francis; Le Hur, Karyn

    2012-03-16

    We show that the concept of bipartite fluctuations F provides a very efficient tool to detect quantum phase transitions in strongly correlated systems. Using state-of-the-art numerical techniques complemented with analytical arguments, we investigate paradigmatic examples for both quantum spins and bosons. As compared to the von Neumann entanglement entropy, we observe that F allows us to find quantum critical points with much better accuracy in one dimension. We further demonstrate that F can be successfully applied to the detection of quantum criticality in higher dimensions with no prior knowledge of the universality class of the transition. Promising approaches to experimentally access fluctuations are discussed for quantum antiferromagnets and cold gases.

  18. Analysis of ground state in random bipartite matching

    NASA Astrophysics Data System (ADS)

    Shi, Gui-Yuan; Kong, Yi-Xiu; Liao, Hao; Zhang, Yi-Cheng

    2016-02-01

    Bipartite matching problems emerge in many human social phenomena. In this paper, we study the ground state of the Gale-Shapley model, which is the most popular bipartite matching model. We apply the Kuhn-Munkres algorithm to compute the numerical ground state of the model. For the first time, we obtain the number of blocking pairs which is a measure of the system instability. We also show that the number of blocking pairs formed by each person follows a geometric distribution. Furthermore, we study how the connectivity in the bipartite matching problems influences the instability of the ground state.

  19. SR-71 - Taxi on Ramp with Engines

    NASA Technical Reports Server (NTRS)

    1995-01-01

    This photo shows a head-on shot of NASA's SR-71A aircraft taxiing on the ramp at NASA's Dryden Flight Research Center, Edwards, California, heat waves from its engines blurring the hangars in the background. Two SR-71 aircraft have been used by NASA as testbeds for high-speed and high-altitude aeronautical research. The aircraft, an SR-71A and an SR-71B pilot trainer aircraft, have been based here at NASA's Dryden Flight Research Center, Edwards, California. They were transferred to NASA after the U.S. Air Force program was cancelled. As research platforms, the aircraft can cruise at Mach 3 for more than one hour. For thermal experiments, this can produce heat soak temperatures of over 600 degrees Fahrenheit (F). This operating environment makes these aircraft excellent platforms to carry out research and experiments in a variety of areas -- aerodynamics, propulsion, structures, thermal protection materials, high-speed and high-temperature instrumentation, atmospheric studies, and sonic boom characterization. The SR-71 was used in a program to study ways of reducing sonic booms or over pressures that are heard on the ground, much like sharp thunderclaps, when an aircraft exceeds the speed of sound. Data from this Sonic Boom Mitigation Study could eventually lead to aircraft designs that would reduce the 'peak' overpressures of sonic booms and minimize the startling affect they produce on the ground. One of the first major experiments to be flown in the NASA SR-71 program was a laser air data collection system. It used laser light instead of air pressure to produce airspeed and attitude reference data, such as angle of attack and sideslip, which are normally obtained with small tubes and vanes extending into the airstream. One of Dryden's SR-71s was used for the Linear Aerospike Rocket Engine, or LASRE Experiment. Another earlier project consisted of a series of flights using the SR-71 as a science camera platform for NASA's Jet Propulsion Laboratory in Pasadena

  20. The scaling of human mobility by taxis is exponential

    NASA Astrophysics Data System (ADS)

    Liang, Xiao; Zheng, Xudong; Lv, Weifeng; Zhu, Tongyu; Xu, Ke

    2012-03-01

    As a significant factor in urban planning, traffic forecasting and prediction of epidemics, modeling patterns of human mobility draws intensive attention from researchers for decades. Power-law distribution and its variations are observed from quite a few real-world human mobility datasets such as the movements of banking notes, trackings of cell phone users' locations and trajectories of vehicles. In this paper, we build models for 20 million trajectories with fine granularity collected from more than 10 thousand taxis in Beijing. In contrast to most models observed in human mobility data, the taxis' traveling displacements in urban areas tend to follow an exponential distribution instead of a power-law. Similarly, the elapsed time can also be well approximated by an exponential distribution. Worth mentioning, analysis of the interevent time indicates the bursty nature of human mobility, similar to many other human activities.

  1. Electron acceptor taxis and blue light effect on bacterial chemotaxis.

    PubMed

    Taylor, B L; Miller, J B; Warrick, H M; Koshland, D E

    1979-11-01

    Salmonella typhimurium and Escherichia coli from anaerobic cultures displayed tactic responses to gradients of nitrate, fumarate, and oxygen when the appropriate electron transport pathway was present. Such responses were named "electron acceptor taxis" because they are elicited by terminal electron acceptors. Mutant strains of S. typhimurium and E. coli were used to establish that functioning electron transport pathways to nitrate and fumarate are required for taxis to these compounds. Aerotaxis in S. typhimurium was blocked by 1.0 mM KCN, which inhibited oxygen uptake. Similarly, a functioning electron transport pathway was shown to be essential for the tumbling response of S. typhimurium and E. coli to intense light (290 to 530 nm). Some inhibitors and uncouplers of respiration were repellents of S. typhimurium. We propose that behavioral responses to light or electron acceptors involve electron transport-mediated perturbations of the proton motive force.

  2. Talent in the taxi: a model system for exploring expertise.

    PubMed

    Woollett, Katherine; Spiers, Hugo J; Maguire, Eleanor A

    2009-05-27

    While there is widespread interest in and admiration of individuals with exceptional talents, surprisingly little is known about the cognitive and neural mechanisms underpinning talent, and indeed how talent relates to expertise. Because many talents are first identified and nurtured in childhood, it can be difficult to determine whether talent is innate, can be acquired through extensive practice or can only be acquired in the presence of the developing brain. We sought to address some of these issues by studying healthy adults who acquired expertise in adulthood. We focused on the domain of memory and used licensed London taxi drivers as a model system. Taxi drivers have to learn the layout of 25,000 streets in London and the locations of thousands of places of interest, and pass stringent examinations in order to obtain an operating licence. Using neuropsychological assessment and structural and functional magnetic resonance imaging, we addressed a range of key questions: in the context of a fully developed brain and an average IQ, can people acquire expertise to an exceptional level; what are the neural signatures, both structural and functional, associated with the use of expertise; does expertise change the brain compared with unskilled control participants; does it confer any cognitive advantages, and similarly, does it come at a cost to other functions? By studying retired taxi drivers, we also consider what happens to their brains and behaviour when experts stop using their skill. Finally, we discuss how the expertise of taxi drivers might relate to the issue of talent and innate abilities. We suggest that exploring talent and expertise in this manner could have implications for education, rehabilitation of patients with cognitive impairments, understanding individual differences and possibly conditions such as autism where exceptional abilities can be a feature.

  3. A Mixed Integer Linear Program for Solving a Multiple Route Taxi Scheduling Problem

    NASA Technical Reports Server (NTRS)

    Montoya, Justin Vincent; Wood, Zachary Paul; Rathinam, Sivakumar; Malik, Waqar Ahmad

    2010-01-01

    Aircraft movements on taxiways at busy airports often create bottlenecks. This paper introduces a mixed integer linear program to solve a Multiple Route Aircraft Taxi Scheduling Problem. The outputs of the model are in the form of optimal taxi schedules, which include routing decisions for taxiing aircraft. The model extends an existing single route formulation to include routing decisions. An efficient comparison framework compares the multi-route formulation and the single route formulation. The multi-route model is exercised for east side airport surface traffic at Dallas/Fort Worth International Airport to determine if any arrival taxi time savings can be achieved by allowing arrivals to have two taxi routes: a route that crosses an active departure runway and a perimeter route that avoids the crossing. Results indicate that the multi-route formulation yields reduced arrival taxi times over the single route formulation only when a perimeter taxiway is used. In conditions where the departure aircraft are given an optimal and fixed takeoff sequence, accumulative arrival taxi time savings in the multi-route formulation can be as high as 3.6 hours more than the single route formulation. If the departure sequence is not optimal, the multi-route formulation results in less taxi time savings made over the single route formulation, but the average arrival taxi time is significantly decreased.

  4. Measuring and modeling air exchange rates inside taxi cabs in Los Angeles, California

    NASA Astrophysics Data System (ADS)

    Shu, Shi; Yu, Nu; Wang, Yueyan; Zhu, Yifang

    2015-12-01

    Air exchange rates (AERs) have a direct impact on traffic-related air pollutant (TRAP) levels inside vehicles. Taxi drivers are occupationally exposed to TRAP on a daily basis, yet there is limited measurement of AERs in taxi cabs. To fill this gap, AERs were quantified in 22 representative Los Angeles taxi cabs including 10 Prius, 5 Crown Victoria, 3 Camry, 3 Caravan, and 1 Uplander under realistic driving (RD) conditions. To further study the impacts of window position and ventilation settings on taxi AERs, additional tests were conducted on 14 taxis with windows closed (WC) and on the other 8 taxis with not only windows closed but also medium fan speed (WC-MFS) under outdoor air mode. Under RD conditions, the AERs in all 22 cabs had a mean of 63 h-1 with a median of 38 h-1. Similar AERs were observed under WC condition when compared to those measured under RD condition. Under WC-MFS condition, AERs were significantly increased in all taxi cabs, when compared with those measured under RD condition. A General Estimating Equation (GEE) model was developed and the modeling results showed that vehicle model was a significant factor in determining the AERs in taxi cabs under RD condition. Driving speed and car age were positively associated with AERs but not statistically significant. Overall, AERs measured in taxi cabs were much higher than typical AERs people usually encounter in indoor environments such as homes, offices, and even regular passenger vehicles.

  5. Bipartite Community Structure of eQTLs.

    PubMed

    Platig, John; Castaldi, Peter J; DeMeo, Dawn; Quackenbush, John

    2016-09-01

    Genome Wide Association Studies (GWAS) and expression quantitative trait locus (eQTL) analyses have identified genetic associations with a wide range of human phenotypes. However, many of these variants have weak effects and understanding their combined effect remains a challenge. One hypothesis is that multiple SNPs interact in complex networks to influence functional processes that ultimately lead to complex phenotypes, including disease states. Here we present CONDOR, a method that represents both cis- and trans-acting SNPs and the genes with which they are associated as a bipartite graph and then uses the modular structure of that graph to place SNPs into a functional context. In applying CONDOR to eQTLs in chronic obstructive pulmonary disease (COPD), we found the global network "hub" SNPs were devoid of disease associations through GWAS. However, the network was organized into 52 communities of SNPs and genes, many of which were enriched for genes in specific functional classes. We identified local hubs within each community ("core SNPs") and these were enriched for GWAS SNPs for COPD and many other diseases. These results speak to our intuition: rather than single SNPs influencing single genes, we see groups of SNPs associated with the expression of families of functionally related genes and that disease SNPs are associated with the perturbation of those functions. These methods are not limited in their application to COPD and can be used in the analysis of a wide variety of disease processes and other phenotypic traits.

  6. Bipartite Community Structure of eQTLs

    PubMed Central

    Platig, John; DeMeo, Dawn; Quackenbush, John

    2016-01-01

    Genome Wide Association Studies (GWAS) and expression quantitative trait locus (eQTL) analyses have identified genetic associations with a wide range of human phenotypes. However, many of these variants have weak effects and understanding their combined effect remains a challenge. One hypothesis is that multiple SNPs interact in complex networks to influence functional processes that ultimately lead to complex phenotypes, including disease states. Here we present CONDOR, a method that represents both cis- and trans-acting SNPs and the genes with which they are associated as a bipartite graph and then uses the modular structure of that graph to place SNPs into a functional context. In applying CONDOR to eQTLs in chronic obstructive pulmonary disease (COPD), we found the global network “hub” SNPs were devoid of disease associations through GWAS. However, the network was organized into 52 communities of SNPs and genes, many of which were enriched for genes in specific functional classes. We identified local hubs within each community (“core SNPs”) and these were enriched for GWAS SNPs for COPD and many other diseases. These results speak to our intuition: rather than single SNPs influencing single genes, we see groups of SNPs associated with the expression of families of functionally related genes and that disease SNPs are associated with the perturbation of those functions. These methods are not limited in their application to COPD and can be used in the analysis of a wide variety of disease processes and other phenotypic traits. PMID:27618581

  7. Stability of similarity measurements for bipartite networks

    NASA Astrophysics Data System (ADS)

    Liu, Jian-Guo; Hou, Lei; Pan, Xue; Guo, Qiang; Zhou, Tao

    2016-01-01

    Similarity is a fundamental measure in network analyses and machine learning algorithms, with wide applications ranging from personalized recommendation to socio-economic dynamics. We argue that an effective similarity measurement should guarantee the stability even under some information loss. With six bipartite networks, we investigate the stabilities of fifteen similarity measurements by comparing the similarity matrixes of two data samples which are randomly divided from original data sets. Results show that, the fifteen measurements can be well classified into three clusters according to their stabilities, and measurements in the same cluster have similar mathematical definitions. In addition, we develop a top-n-stability method for personalized recommendation, and find that the unstable similarities would recommend false information to users, and the performance of recommendation would be largely improved by using stable similarity measurements. This work provides a novel dimension to analyze and evaluate similarity measurements, which can further find applications in link prediction, personalized recommendation, clustering algorithms, community detection and so on.

  8. Competition for popularity in bipartite networks.

    PubMed

    Díaz, Mariano Beguerisse; Porter, Mason A; Onnela, Jukka-Pekka

    2010-12-01

    We present a dynamical model for rewiring and attachment in bipartite networks. Edges are placed between nodes that belong to catalogs that can either be fixed in size or growing in size. The model is motivated by an empirical study of data from the video rental service Netflix, which invites its users to give ratings to the videos available in its catalog. We find that the distribution of the number of ratings given by users and that of the number of ratings received by videos both follow a power law with an exponential cutoff. We also examine the activity patterns of Netflix users and find bursts of intense video-rating activity followed by long periods of inactivity. We derive ordinary differential equations to model the acquisition of edges by the nodes over time and obtain the corresponding time-dependent degree distributions. We then compare our results with the Netflix data and find good agreement. We conclude with a discussion of how catalog models can be used to study systems in which agents are forced to choose, rate, or prioritize their interactions from a large set of options.

  9. Competition for popularity in bipartite networks

    NASA Astrophysics Data System (ADS)

    Beguerisse Díaz, Mariano; Porter, Mason A.; Onnela, Jukka-Pekka

    2010-12-01

    We present a dynamical model for rewiring and attachment in bipartite networks. Edges are placed between nodes that belong to catalogs that can either be fixed in size or growing in size. The model is motivated by an empirical study of data from the video rental service Netflix, which invites its users to give ratings to the videos available in its catalog. We find that the distribution of the number of ratings given by users and that of the number of ratings received by videos both follow a power law with an exponential cutoff. We also examine the activity patterns of Netflix users and find bursts of intense video-rating activity followed by long periods of inactivity. We derive ordinary differential equations to model the acquisition of edges by the nodes over time and obtain the corresponding time-dependent degree distributions. We then compare our results with the Netflix data and find good agreement. We conclude with a discussion of how catalog models can be used to study systems in which agents are forced to choose, rate, or prioritize their interactions from a large set of options.

  10. Stability of similarity measurements for bipartite networks

    PubMed Central

    Liu, Jian-Guo; Hou, Lei; Pan, Xue; Guo, Qiang; Zhou, Tao

    2016-01-01

    Similarity is a fundamental measure in network analyses and machine learning algorithms, with wide applications ranging from personalized recommendation to socio-economic dynamics. We argue that an effective similarity measurement should guarantee the stability even under some information loss. With six bipartite networks, we investigate the stabilities of fifteen similarity measurements by comparing the similarity matrixes of two data samples which are randomly divided from original data sets. Results show that, the fifteen measurements can be well classified into three clusters according to their stabilities, and measurements in the same cluster have similar mathematical definitions. In addition, we develop a top-n-stability method for personalized recommendation, and find that the unstable similarities would recommend false information to users, and the performance of recommendation would be largely improved by using stable similarity measurements. This work provides a novel dimension to analyze and evaluate similarity measurements, which can further find applications in link prediction, personalized recommendation, clustering algorithms, community detection and so on. PMID:26725688

  11. Stability of similarity measurements for bipartite networks.

    PubMed

    Liu, Jian-Guo; Hou, Lei; Pan, Xue; Guo, Qiang; Zhou, Tao

    2016-01-04

    Similarity is a fundamental measure in network analyses and machine learning algorithms, with wide applications ranging from personalized recommendation to socio-economic dynamics. We argue that an effective similarity measurement should guarantee the stability even under some information loss. With six bipartite networks, we investigate the stabilities of fifteen similarity measurements by comparing the similarity matrixes of two data samples which are randomly divided from original data sets. Results show that, the fifteen measurements can be well classified into three clusters according to their stabilities, and measurements in the same cluster have similar mathematical definitions. In addition, we develop a top-n-stability method for personalized recommendation, and find that the unstable similarities would recommend false information to users, and the performance of recommendation would be largely improved by using stable similarity measurements. This work provides a novel dimension to analyze and evaluate similarity measurements, which can further find applications in link prediction, personalized recommendation, clustering algorithms, community detection and so on.

  12. Hot multiboundary wormholes from bipartite entanglement

    NASA Astrophysics Data System (ADS)

    Marolf, Donald; Maxfield, Henry; Peach, Alex; Ross, Simon

    2015-11-01

    We analyze the 1+1 CFT states dual to hot (time-symmetric) 2+1 multiboundary AdS wormholes. These are black hole geometries with high local temperature, n≥slant 1 asymptotically-AdS3 regions, and arbitrary internal topology. The dual state at t = 0 is defined on n circles. We show these to be well-described by sewing together tensor networks corresponding to thermofield double states. As a result, the entanglement is spatially localized and bipartite: away from particular boundary points (‘vertices’) any small connected region A of the boundary CFT is entangled only with another small connected region B, where B may lie on a different circle or may be a different part of the same circle. We focus on the pair-of-pants case, from which more general cases may be constructed. We also discuss finite-temperature corrections, where we note that the states involve a code subspace in each circle.

  13. A bipartite graph of Neuroendocrine System

    NASA Astrophysics Data System (ADS)

    Guo, Zhong-Wei; Zou, Sheng-Rong; Peng, Yu-Jing; Zhou, Ta; Gu, Chang-Gui; He, Da-Ren

    2008-03-01

    We present an empirical investigation on the neuroendocrine system and suggest describe it by a bipartite graph. In the net the cells can be regarded as collaboration acts and the mediators can be regarded as collaboration actors. The act degree stands for the number of the cells that secrete a single mediator. Among them bFGF (the basic fibroblast growth factor) has the largest node act degree. It is the most important mitogenic cytokine, followed by TGF-beta, IL-6, IL1-beta, VEGF, IGF-1and so on. They are critical in neuroendocrine system to maintain bodily healthiness, emotional stabilization and endocrine harmony. The act degree distribution shows a shifted power law (SPL) function forms [1]. The average act degree of neuroendocrine network is h=3.01, It means that each mediator is secreted by three cells on average. The similarity, which stands for the average probability of secreting the same mediators by all neuroendocrine cells, is observed as s=0.14. Our results may be used in the research of the medical treatment of neuroendocrine diseases. [1] Assortativity and act degree distribution of some collaboration networks, Hui Chang, Bei-Bei Su, Yue-Ping Zhou, Daren He, Physica A, 383 (2007) 687-702

  14. Percolation on bipartite scale-free networks

    NASA Astrophysics Data System (ADS)

    Hooyberghs, H.; Van Schaeybroeck, B.; Indekeu, J. O.

    2010-08-01

    Recent studies introduced biased (degree-dependent) edge percolation as a model for failures in real-life systems. In this work, such process is applied to networks consisting of two types of nodes with edges running only between nodes of unlike type. Such bipartite graphs appear in many social networks, for instance in affiliation networks and in sexual-contact networks in which both types of nodes show the scale-free characteristic for the degree distribution. During the depreciation process, an edge between nodes with degrees k and q is retained with a probability proportional to (, where α is positive so that links between hubs are more prone to failure. The removal process is studied analytically by introducing a generating functions theory. We deduce exact self-consistent equations describing the system at a macroscopic level and discuss the percolation transition. Critical exponents are obtained by exploiting the Fortuin-Kasteleyn construction which provides a link between our model and a limit of the Potts model.

  15. Evolutionary method for finding communities in bipartite networks.

    PubMed

    Zhan, Weihua; Zhang, Zhongzhi; Guan, Jihong; Zhou, Shuigeng

    2011-06-01

    An important step in unveiling the relation between network structure and dynamics defined on networks is to detect communities, and numerous methods have been developed separately to identify community structure in different classes of networks, such as unipartite networks, bipartite networks, and directed networks. Here, we show that the finding of communities in such networks can be unified in a general framework-detection of community structure in bipartite networks. Moreover, we propose an evolutionary method for efficiently identifying communities in bipartite networks. To this end, we show that both unipartite and directed networks can be represented as bipartite networks, and their modularity is completely consistent with that for bipartite networks, the detection of modular structure on which can be reformulated as modularity maximization. To optimize the bipartite modularity, we develop a modified adaptive genetic algorithm (MAGA), which is shown to be especially efficient for community structure detection. The high efficiency of the MAGA is based on the following three improvements we make. First, we introduce a different measure for the informativeness of a locus instead of the standard deviation, which can exactly determine which loci mutate. This measure is the bias between the distribution of a locus over the current population and the uniform distribution of the locus, i.e., the Kullback-Leibler divergence between them. Second, we develop a reassignment technique for differentiating the informative state a locus has attained from the random state in the initial phase. Third, we present a modified mutation rule which by incorporating related operations can guarantee the convergence of the MAGA to the global optimum and can speed up the convergence process. Experimental results show that the MAGA outperforms existing methods in terms of modularity for both bipartite and unipartite networks.

  16. Factors associated with crashes involving taxi owners and non-owners: A case of moral hazard and adverse selection?

    PubMed

    Tay, Richard; Choi, Jaisung

    2016-02-01

    Taxis experience a higher risk of a motor vehicle crash partly because of their much higher levels of exposure on the roads. Although several studies have been conducted to examine the factors associated with the frequency and severity of taxi collisions, little research has been conducted to examine the differences in the factors associated with owner taxis and non-owner taxis. This study finds that collisions involving non-owners are more likely to be associated with poor or risky driving behaviors than collisions involving taxi vehicle owners. This result is consistent with the economic principles of moral hazard and adverse selection. Hence, policy makers responsible for traffic safety, taxi regulation or taxi operations should consider measures to reduce these market inefficiencies and improve the safety of not only taxi drivers but all road users.

  17. Degree distributions of bipartite networks and their projections

    NASA Astrophysics Data System (ADS)

    Vasques Filho, Demival; O'Neale, Dion

    Bipartite networks play an important role in the analysis of social and economic systems as they explicitly show the conceptual links between different types of entities. As an example, it is possible to build networks to investigate interactions regarding scientific and technological innovation that are well represented by a natural bipartite structure. Since we are often most interested in only one of the node types (e.g. the authors in an author-publication network), it is common to end up working with a projected version of the underlying bipartite network. The topology of projections and the dynamics that take place on it are highly dependent on the probability distribution of nodes degrees. We use the formalism of generating functions to infer how the degree distributions of the original bipartite network affect the distribution in the projected version. Moreover, we create artificial bipartite graphs by arbitrarily choosing degree distributions for the sets of nodes and construct the projection to analyze the resulting probability distribution. Our findings show that when projecting onto a particular set of nodes, the resulting degree distribution follows the behavior of the probability distribution of such nodes, subject, however, to the tail of the opposite distribution.

  18. Hybrid Taxis Give Fuel Economy a Lift -Clean Cities Fleet Experiences -

    SciTech Connect

    2009-04-01

    The hybrid taxis are able to achieve about twice the gas mileage of a conventional taxi while helping cut gasoline use and fuel costs. Tax credits and other incentives are helping both company owners and drivers make the switch to hybrids.

  19. Taxis but not private cars are mite allergen reservoirs in Brazil.

    PubMed

    Taketomi, E A; Justino, C M; Pereira, F L; Segundo, G R; Sopelete, M C; Sung, S J; Silva, D A

    2006-01-01

    Indoor allergens are major causative agents in allergic disease development. Besides homes, public transport vehicles have been considered important mite and pet allergen reservoirs. Our recent studies on allergen exposure in automobiles showed that different allergen levels are found in private cars versus taxis. We quantified group 1 Dermatophagoides spp. (Der 1), Felis domesticus (Fel d 1), and Canis familiaris (Can f 1) allergen levels by ELISA in dust samples from 60 taxi and 60 private car upholstered seats. Mean levels of Der 1 and Fel d 1 were significantly higher in taxis than private cars. A significantly higher percentage of taxis (42%) harboring sensitizing levels of Der 1 compared to private cars (5%) was also found. In spite of the low mean Fel d 1 levels, comparison of the percentage of vehicles with moderate Fel d 1 levels showed a significant difference between taxis and private cars (43% vs. 20%). On the other hand, mean Can f 1 levels were significantly higher in private cars compared to taxis concomitant with a significantly higher percentage of private cars containing moderate Can f 1 levels than taxis (53% vs. 28%). We conclude that upholstered seats from Brazilian taxis but not private cars constitute an important mite allergen reservoir. Thus, additional effective measures for the reduction of allergen exposure in vehicles within the global allergen avoidance strategy should also be routinely accomplished to minimize the induction of sensitization and symptoms in allergic patients.

  20. Driving to better health: cancer and cardiovascular risk assessment among taxi cab operators in Chicago.

    PubMed

    Apantaku-Onayemi, Funmi; Baldyga, William; Amuwo, Shaffdeen; Adefuye, Adedeji; Mason, Terry; Mitchell, Robin; Blumenthal, Daniel S

    2012-05-01

    While a number of investigations of the health of taxi cab drivers have been conducted in Europe, Asia, and Africa, virtually none have been conducted in the United States. We undertook a survey of taxi cab operators in the Chicago area to understand better their health status and health promotion practices. The survey was completed by a convenience sample of 751 Chicago taxi drivers. Taxi drivers had low rates of insurance coverage, fruit and vegetable consumption, and physical activity compared with the general Chicago population. Participation in cancer screening tests was also lower for this group. A high proportion of taxi drivers are immigrants. They tend to be highly educated and report a readiness to engage in more health-promoting behaviors. Further research is needed to develop a targeted intervention for this population.

  1. Driving to Better Health: Cancer and Cardiovascular Risk Assessment among Taxi Cab Operators in Chicago

    PubMed Central

    Apantaku-Onayemi, Funmi; Baldyga, William; Amuwo, Shaffdeen; Adefuye, Adedeji; Mason, Terry; Mitchell, Robin; Blumenthal, Daniel S.

    2014-01-01

    While a number of investigations of the health of taxi cab drivers have been conducted in Europe, Asia, and Africa, virtually none have been conducted in the United States. We undertook a survey of taxi cab operators in the Chicago area to understand better their health status and health promotion practices. The survey was completed by a convenience sample of 751 Chicago taxi drivers. Taxi drivers had low rates of insurance coverage, fruit and vegetable consumption, and physical activity compared with the general Chicago population. Participation in cancer screening tests was also lower for this group. A high proportion of taxi drivers are immigrants. They tend to be highly educated and report a readiness to engage in more health-promoting behaviors. Further research is needed to develop a targeted intervention for this population. PMID:22643623

  2. Two classes of bipartite networks: nested biological and social systems.

    PubMed

    Burgos, Enrique; Ceva, Horacio; Hernández, Laura; Perazzo, R P J; Devoto, Mariano; Medan, Diego

    2008-10-01

    Bipartite graphs have received some attention in the study of social networks and of biological mutualistic systems. A generalization of a previous model is presented, that evolves the topology of the graph in order to optimally account for a given contact preference rule between the two guilds of the network. As a result, social and biological graphs are classified as belonging to two clearly different classes. Projected graphs, linking the agents of only one guild, are obtained from the original bipartite graph. The corresponding evolution of its statistical properties is also studied. An example of a biological mutualistic network is analyzed in detail, and it is found that the model provides a very good fitting of all the main statistical features. The model also provides a proper qualitative description of the same features observed in social webs, suggesting the possible reasons underlying the difference in the organization of these two kinds of bipartite networks.

  3. Measurement of cellular chemotaxis with ECIS/Taxis.

    PubMed

    Pietrosimone, Kathryn M; Yin, Xiuyin; Knecht, David A; Lynes, Michael A

    2012-04-01

    Cellular movement in response to external stimuli is fundamental to many cellular processes including wound healing, inflammation and the response to infection. A common method to measure chemotaxis is the Boyden chamber assay, in which cells and chemoattractant are separated by a porous membrane. As cells migrate through the membrane toward the chemoattractant, they adhere to the underside of the membrane, or fall into the underlying media, and are subsequently stained and visually counted (1). In this method, cells are exposed to a steep and transient chemoattractant gradient, which is thought to be a poor representation of gradients found in tissues (2). Another assay system, the under-agarose chemotaxis assay, (3, 4) measures cell movement across a solid substrate in a thin aqueous film that forms under the agarose layer. The gradient that develops in the agarose is shallow and is thought to be an appropriate representation of naturally occurring gradients. Chemotaxis can be evaluated by microscopic imaging of the distance traveled. Both the Boyden chamber assay and the under-agarose assay are usually configured as endpoint assays. The automated ECIS/Taxis system combines the under-agarose approach with Electric Cell-substrate Impedance Sensing (ECIS) (5, 6). In this assay, target electrodes are located in each of 8 chambers. A large counter-electrode runs through each of the 8 chambers (Figure 2). Each chamber is filled with agarose and two small wells are the cut in the agarose on either side of the target electrode. One well is filled with the test cell population, while the other holds the sources of diffusing chemoattractant (Figure 3). Current passed through the system can be used to determine the change in resistance that occurs as cells pass over the target electrode. Cells on the target electrode increase the resistance of the system (6). In addition, rapid fluctuations in the resistance represent changes in the interactions of cells with the electrode

  4. XB-70A during startup and ramp taxi

    NASA Technical Reports Server (NTRS)

    1968-01-01

    The XB-70 was the world's largest experimental aircraft. Capable of flight at speeds of three times the speed of sound (2,000 miles per hour) at altitudes of 70,000 feet, the XB-70 was used to collect in-flight information for use in the design of future supersonic aircraft, military and civilian. This 35-second video shows the startup of the XB-70A airplane engines, the beginning of its taxi to the runway, and a turn on the ramp that shows the unique configuration of this aircraft.

  5. Largest separable balls around the maximally mixed bipartite quantum state

    NASA Astrophysics Data System (ADS)

    Gurvits, Leonid; Barnum, Howard

    2002-12-01

    For finite-dimensional bipartite quantum systems, we find the exact size of the largest balls, in spectral lp norms for 1<=p<=∞, of separable (unentangled) matrices around the identity matrix. This implies a simple and intuitively meaningful geometrical sufficient condition for separability of bipartite density matrices: that their purity tr ρ2 not be too large. Theoretical and experimental applications of these results include algorithmic problems such as computing whether or not a state is entangled, and practical ones such as obtaining information about the existence or nature of entanglement in states reached by nuclear magnetic resonance quantum computation implementations or other experimental situations.

  6. Exposure of taxi drivers and office workers to total and respirable manganese in an urban environment.

    PubMed

    Zayed, J; Mikhaïl, M; Loranger, S; Kennedy, G; L'Espérance, G

    1996-04-01

    This research measured the exposure of two groups of workers to respirable and total manganese (Mn) and characterized the Mn particles emitted from an automobile tailpipe. The exposure of 20 office workers and 9 taxi drivers in Toronto to total airborne Mn and respirable Mn was measured over a 7-day period, 24 hours per day. Subjects were asked to wear two pumps (one included a size-selective cyclone that collected the respirable particles), and two battery chargers were supplied to each person so that the pump batteries could be recharged overnight while sampling continued. All filters were analyzed by neutron activation. In addition, Mn particles emitted from a car were collected directly at the exhaust. Particles were observed using secondary electron images in a scanning electron microscope (SEM), and their elemental composition was determined by energy dispersive x-ray spectrometry. The Mn concentrations obtained for the group of office workers ranged from 0.001 to 0.034 microgram/m3 for respirable Mn and from 0.002 to 0.044 microgram/m3 for total Mn. For the taxi drivers the Mn concentrations ranged from 0.007 to 0.032 microgram/m3 for respirable Mn and from 0.008 to 0.073 microgram/m3 for total Mn. There was a significant difference (p < 0.05) between the two groups for both respirable and total Mn. SEM analysis showed that the particles were mostly heterogeneous agglomerates varying from 1 to 100 microns. Even if the specific exposure to Mn from automobiles has not been directly established, these results suggest that the related increase of exposure may be limited.

  7. Centurion Quarter-scale Prototype Pre-flight Taxi Test

    NASA Technical Reports Server (NTRS)

    1997-01-01

    As crewmen jog and cycle alongside, a battery-powered, quarter-scale prototype of the remotely-piloted Centurion flying wing rolls across the El Mirage Dry Lake during pre-flight taxi tests. Centurion was a unique remotely piloted, solar-powered airplane developed under NASA's Environmental Research Aircraft and Sensor (ERAST) Program at the Dryden Flight Research Center, Edwards, California. Dryden joined with AeroVironment, Inc., Monrovia, California, under an ERAST Joint Sponsored Research Agreement, to design, develop, manufacture, and conduct flight development tests for the Centurion. The airplane was believed to be the first aircraft designed to achieve sustained horizontal flight at altitudes of 90,000 to 100,000 feet. Achieving this capability would meet the ERAST goal of developing an ultrahigh-altitude airplane that could meet the needs of the science community to perform upper-atmosphere environmental data missions. Much of the technology leading to the Centurion was developed during the Pathfinder and Pathfinder-Plus projects. However, in the course of its development, the Centurion became a prototype technology demonstration aircraft designed to validate the technology for the Helios, a planned future high-altitude, solar-powered aircraft that could fly for weeks or months at a time on science or telecommunications missions. Centurion had 206-foot-long wings and used batteries to supply power to the craft's 14 electric motors and electronic systems. Centurion first flew at Dryden Nov. 10, 1998, and followed up with a second test flight Nov. 19. On its third and final flight on Dec. 3, the craft was aloft for 31 minutes and reached an altitude of about 400 feet. All three flights were conducted over a section of Rogers Dry Lake adjacent to Dryden. For its third flight, the Centurion carried a simulated payload of more than 600 pounds--almost half the lightweight aircraft's empty weight. John Del Frate, Dryden's project manager for solar

  8. Centurion Quarter-scale Prototype Prepared for Taxi Tests

    NASA Technical Reports Server (NTRS)

    1997-01-01

    As sunlight breaks over Southern California's El Mirage Dry Lake, Crew members prepare a battery-powered quarter-scale prototype of the remotely-piloted Centurion flying wing for a taxi test. Centurion was a unique remotely piloted, solar-powered airplane developed under NASA's Environmental Research Aircraft and Sensor (ERAST) Program at the Dryden Flight Research Center, Edwards, California. Dryden joined with AeroVironment, Inc., Monrovia, California, under an ERAST Joint Sponsored Research Agreement, to design, develop, manufacture, and conduct flight development tests for the Centurion. The airplane was believed to be the first aircraft designed to achieve sustained horizontal flight at altitudes of 90,000 to 100,000 feet. Achieving this capability would meet the ERAST goal of developing an ultrahigh-altitude airplane that could meet the needs of the science community to perform upper-atmosphere environmental data missions. Much of the technology leading to the Centurion was developed during the Pathfinder and Pathfinder-Plus projects. However, in the course of its development, the Centurion became a prototype technology demonstration aircraft designed to validate the technology for the Helios, a planned future high-altitude, solar-powered aircraft that could fly for weeks or months at a time on science or telecommunications missions. Centurion had 206-foot-long wings and used batteries to supply power to the craft's 14 electric motors and electronic systems. Centurion first flew at Dryden Nov. 10, 1998, and followed up with a second test flight Nov. 19. On its third and final flight on Dec. 3, the craft was aloft for 31 minutes and reached an altitude of about 400 feet. All three flights were conducted over a section of Rogers Dry Lake adjacent to Dryden. For its third flight, the Centurion carried a simulated payload of more than 600 pounds--almost half the lightweight aircraft's empty weight. John Del Frate, Dryden's project manager for solar

  9. Randomizing bipartite networks: the case of the World Trade Web

    PubMed Central

    Saracco, Fabio; Di Clemente, Riccardo; Gabrielli, Andrea; Squartini, Tiziano

    2015-01-01

    Within the last fifteen years, network theory has been successfully applied both to natural sciences and to socioeconomic disciplines. In particular, bipartite networks have been recognized to provide a particularly insightful representation of many systems, ranging from mutualistic networks in ecology to trade networks in economy, whence the need of a pattern detection-oriented analysis in order to identify statistically-significant structural properties. Such an analysis rests upon the definition of suitable null models, i.e. upon the choice of the portion of network structure to be preserved while randomizing everything else. However, quite surprisingly, little work has been done so far to define null models for real bipartite networks. The aim of the present work is to fill this gap, extending a recently-proposed method to randomize monopartite networks to bipartite networks. While the proposed formalism is perfectly general, we apply our method to the binary, undirected, bipartite representation of the World Trade Web, comparing the observed values of a number of structural quantities of interest with the expected ones, calculated via our randomization procedure. Interestingly, the behavior of the World Trade Web in this new representation is strongly different from the monopartite analogue, showing highly non-trivial patterns of self-organization. PMID:26029820

  10. Randomizing bipartite networks: the case of the World Trade Web.

    PubMed

    Saracco, Fabio; Di Clemente, Riccardo; Gabrielli, Andrea; Squartini, Tiziano

    2015-06-01

    Within the last fifteen years, network theory has been successfully applied both to natural sciences and to socioeconomic disciplines. In particular, bipartite networks have been recognized to provide a particularly insightful representation of many systems, ranging from mutualistic networks in ecology to trade networks in economy, whence the need of a pattern detection-oriented analysis in order to identify statistically-significant structural properties. Such an analysis rests upon the definition of suitable null models, i.e. upon the choice of the portion of network structure to be preserved while randomizing everything else. However, quite surprisingly, little work has been done so far to define null models for real bipartite networks. The aim of the present work is to fill this gap, extending a recently-proposed method to randomize monopartite networks to bipartite networks. While the proposed formalism is perfectly general, we apply our method to the binary, undirected, bipartite representation of the World Trade Web, comparing the observed values of a number of structural quantities of interest with the expected ones, calculated via our randomization procedure. Interestingly, the behavior of the World Trade Web in this new representation is strongly different from the monopartite analogue, showing highly non-trivial patterns of self-organization.

  11. SemanticTraj: A New Approach to Interacting with Massive Taxi Trajectories.

    PubMed

    Al-Dohuki, Shamal; Wu, Yingyu; Kamw, Farah; Yang, Jing; Li, Xin; Zhao, Ye; Ye, Xinyue; Chen, Wei; Ma, Chao; Wang, Fei

    2017-01-01

    Massive taxi trajectory data is exploited for knowledge discovery in transportation and urban planning. Existing tools typically require users to select and brush geospatial regions on a map when retrieving and exploring taxi trajectories and passenger trips. To answer seemingly simple questions such as "What were the taxi trips starting from Main Street and ending at Wall Street in the morning?" or "Where are the taxis arriving at the Art Museum at noon typically coming from?", tedious and time consuming interactions are usually needed since the numeric GPS points of trajectories are not directly linked to the keywords such as "Main Street", "Wall Street", and "Art Museum". In this paper, we present SemanticTraj, a new method for managing and visualizing taxi trajectory data in an intuitive, semantic rich, and efficient means. With SemanticTraj, domain and public users can find answers to the aforementioned questions easily through direct queries based on the terms. They can also interactively explore the retrieved data in visualizations enhanced by semantic information of the trajectories and trips. In particular, taxi trajectories are converted into taxi documents through a textualization transformation process. This process maps GPS points into a series of street/POI names and pick-up/drop-off locations. It also converts vehicle speeds into user-defined descriptive terms. Then, a corpus of taxi documents is formed and indexed to enable flexible semantic queries over a text search engine. Semantic labels and meta-summaries of the results are integrated with a set of visualizations in a SemanticTraj prototype, which helps users study taxi trajectories quickly and easily. A set of usage scenarios are presented to show the usability of the system. We also collected feedback from domain experts and conducted a preliminary user study to evaluate the visual system.

  12. Human Mars Mission Performance Crew Taxi Profile. Part 1

    NASA Technical Reports Server (NTRS)

    Duaro, Vince A.

    1999-01-01

    This timeline was generated on the Integrated Mission Program (IMP). All burn events over 2 seconds are finite with IMP solving a two point boundary value setup for begin burn time, burn time and control angles. Perigee and apogee shown above are mean orbital values. Significant events are listed. Each finite thrust event has two lines. The first is the beginning time showing the initial conditions, thrust and ISP used. The second has the end burn conditions and the delta v and time of burn. This case is an abort from the 750 x 750 phasing abort, using the taxi's main engines. An abort using the Reaction Control System (RCS) was also investigated but required a large increase in RCS propellant and was abandoned.

  13. Suppression of radiated emission in fiscal taxi meter

    NASA Astrophysics Data System (ADS)

    He, Hong; Yang, Pei-pei; Su, Xing; Zhang, Da-jian; Wang, Ke-xi; Hou, Ming-feng

    2011-12-01

    This paper is based upon National Standards for EMC. For the problem that the intensity of electromagnetic radiation in the meter with the THG at 36MHz is seriously more than National Standards, by studying the theory of radiation emission and analyzing the formation mechanism of electromagnetic radiation interference, it proposes three restrain measures: 1.the improvement of the Crystal oscillator's grounding measure; 2.adding a RC filter circuit to the Crystal oscillator circuit; 3.the improvement of the tax's communication cable, solving the problem that radiation harassment the taxi meter seriously exceeds. The experimental result demonstrates that the radiation intensity of tax meter improved with the general measures meet the requirements of the national standard, making more than 32000 taxes in Tianjin install this green meter, protecting the safety of staff and normal operation of the surrounding equipment.

  14. Characterization of Halobacterium halobium mutants defective in taxis.

    PubMed

    Sundberg, S A; Alam, M; Lebert, M; Spudich, J L; Oesterhelt, D; Hazelbauer, G L

    1990-05-01

    Mutant derivatives of Halobacterium halobium previously isolated by using a procedure that selected for defective phototactic response to white light were examined for an array of phenotypic characteristics related to phototaxis and chemotaxis. The properties tested were unstimulated swimming behavior, behaviorial responses to temporal gradients of light and spatial gradients of chemoattractants, content of photoreceptor pigments, methylation of methyl-accepting taxis proteins, and transient increases in rate of release of volatile methyl groups induced by tactic stimulation. Several distinct phenotypes were identified, corresponding to a mutant missing photoreceptors, a mutant defective in the methyltransferase, a mutant altered in control of the methylesterase, and mutants apparently defective in intracellular signaling. All except the photoreceptor mutant were defective in both chemotaxis and phototaxis.

  15. Pili-taxis: Clustering of Neisseria gonorrhoeae bacteria

    NASA Astrophysics Data System (ADS)

    Taktikos, Johannes; Zaburdaev, Vasily; Biais, Nicolas; Stark, Holger; Weitz, David A.

    2012-02-01

    The first step of colonization of Neisseria gonorrhoeae bacteria, the etiological agent of gonorrhea, is the attachment to human epithelial cells. The attachment of N. gonorrhoeae bacteria to surfaces or other cells is primarily mediated by filamentous appendages, called type IV pili (Tfp). Cycles of elongation and retraction of Tfp are responsible for a common bacterial motility called twitching motility which allows the bacteria to crawl over surfaces. Experimentally, N. gonorrhoeae cells initially dispersed over a surface agglomerate into round microcolonies within hours. It is so far not known whether this clustering is driven entirely by the Tfp dynamics or if chemotactic interactions are needed. Thus, we investigate whether the agglomeration may stem solely from the pili-mediated attraction between cells. By developing a statistical model for pili-taxis, we try to explain the experimental measurements of the time evolution of the mean cluster size, number of clusters, and area fraction covered by the cells.

  16. Taxis assays measure directional movement of mosquitoes to olfactory cues

    PubMed Central

    2013-01-01

    Background Malaria control methods targeting indoor-biting mosquitoes have limited impact on vectors that feed and rest outdoors. Exploiting mosquito olfactory behaviour to reduce blood-feeding outdoors might be a sustainable approach to complement existing control strategies. Methodologies that can objectively quantify responses to odour under realistic field conditions and allow high-throughput screening of many compounds are required for development of effective odour-based control strategies. Methods The olfactory responses of laboratory-reared Anopheles gambiae in a semi-field tunnel and A. arabiensis females in an outdoor field setting to three stimuli, namely whole human odour, a synthetic blend of carboxylic acids plus carbon dioxide and CO2 alone at four distances up to 100 metres were measured in two experiments using three-chambered taxis boxes that allow mosquito responses to natural or experimentally-introduced odour cues to be quantified. Results Taxis box assays could detect both activation of flight and directional mosquito movement. Significantly more (6-18%) A. arabiensis mosquitoes were attracted to natural human odour in the field up to 30 metres compared to controls, and blended synthetic human odours attracted 20% more A. gambiae in the semi-field tunnel up to 70 metres. Whereas CO2 elicited no response in A. arabiensis in the open field, it was attractive to A. gambiae up to 50 metres (65% attraction compared to 36% in controls). Conclusions We have developed a simple reproducible system to allow for the comparison of compounds that are active over medium- to long-ranges in semi-field or full-field environments. Knowing the natural range of attraction of anopheline mosquitoes to potential blood sources has substantial implications for the design of malaria control strategies, and adds to the understanding of olfactory behaviour in mosquitoes. This experimental strategy could also be extended from malaria vectors to other motile arthropods of

  17. Increasing influenza vaccination in New York City taxi drivers: A community driven approach.

    PubMed

    Gany, Francesca; Rau-Murthy, Rohini; Mujawar, Imran

    2015-05-21

    The Healthy People 2020 influenza immunization goal is 80% for non-institutionalized adults 18-64. However, vaccination rates remain stubbornly low. Culturally tailored approaches to communities with poor vaccine uptake are necessary. Taxi drivers are at risk for influenza and its complications, could serve as vectors for influenza infection, and could be an effective vaccination target to enhance herd immunity of the urban population. To the best of our knowledge, this is the first study related to influenza vaccination among taxi drivers. The NYC Taxi Network surveyed a convenience sample of 53 taxi drivers to understand vaccination barriers. Only 17% had been vaccinated. Results informed a pilot tailored workplace intervention, which resulted in vaccinations for 44% of unvaccinated drivers. The study revealed that older drivers were more likely to be vaccinated than younger drivers, while the most common barrier to immunization was that drivers thought vaccination was 'not necessary'.

  18. Charging Guidance of Electric Taxis Based on Adaptive Particle Swarm Optimization.

    PubMed

    Niu, Liyong; Zhang, Di

    2015-01-01

    Electric taxis are playing an important role in the application of electric vehicles. The actual operational data of electric taxis in Shenzhen, China, is analyzed, and, in allusion to the unbalanced time availability of the charging station equipment, the electric taxis charging guidance system is proposed basing on the charging station information and vehicle information. An electric taxis charging guidance model is established and guides the charging based on the positions of taxis and charging stations with adaptive mutation particle swarm optimization. The simulation is based on the actual data of Shenzhen charging stations, and the results show that electric taxis can be evenly distributed to the appropriate charging stations according to the charging pile numbers in charging stations after the charging guidance. The even distribution among the charging stations in the area will be achieved and the utilization of charging equipment will be improved, so the proposed charging guidance method is verified to be feasible. The improved utilization of charging equipment can save public charging infrastructure resources greatly.

  19. Taxi Time Prediction at Charlotte Airport Using Fast-Time Simulation and Machine Learning Techniques

    NASA Technical Reports Server (NTRS)

    Lee, Hanbong

    2016-01-01

    Accurate taxi time prediction is required for enabling efficient runway scheduling that can increase runway throughput and reduce taxi times and fuel consumptions on the airport surface. Currently NASA and American Airlines are jointly developing a decision-support tool called Spot and Runway Departure Advisor (SARDA) that assists airport ramp controllers to make gate pushback decisions and improve the overall efficiency of airport surface traffic. In this presentation, we propose to use Linear Optimized Sequencing (LINOS), a discrete-event fast-time simulation tool, to predict taxi times and provide the estimates to the runway scheduler in real-time airport operations. To assess its prediction accuracy, we also introduce a data-driven analytical method using machine learning techniques. These two taxi time prediction methods are evaluated with actual taxi time data obtained from the SARDA human-in-the-loop (HITL) simulation for Charlotte Douglas International Airport (CLT) using various performance measurement metrics. Based on the taxi time prediction results, we also discuss how the prediction accuracy can be affected by the operational complexity at this airport and how we can improve the fast time simulation model before implementing it with an airport scheduling algorithm in a real-time environment.

  20. Sports injury to a bipartite medial cuneiform in a child.

    PubMed

    Eves, Timothy B; Ahmad, Mudussar A; Oddy, Michael J

    2014-01-01

    We report the case of an 11-year-old boy who had sustained a soccer injury to his mid-foot. Plain radiography did not reveal any fracture to account for the severity of his symptoms or his inability to bear weight. Magnetic resonance imaging was undertaken and demonstrated the medial cuneiform to be a bipartite bone consisting of 2 ossicles connected by a synchondrosis. No acute fracture or diastasis of the bipartite bone was demonstrated; however, significant bone marrow edema was noted, corresponding to the site of the injury and his clinical point bony tenderness. This anatomic variant should be considered as a rare differential diagnosis in the skeletally immature foot. The injury was treated nonoperatively with a non-weightbearing cast and pneumatic walker immobilization, with successful resolution of his symptoms and a return to sports activity by 4 months after injury.

  1. Optimal values of bipartite entanglement in a tripartite system

    NASA Astrophysics Data System (ADS)

    Sahoo, Shaon

    2015-01-01

    For a general tripartite system in some pure state, an observer possessing any two parts will see them in a mixed state. By the consequence of Hughston-Jozsa-Wootters theorem, each basis set of local measurement on the third part will correspond to a particular decomposition of the bipartite mixed state into a weighted sum of pure states. It is possible to associate an average bipartite entanglement (S bar) with each of these decompositions. The maximum value of S bar is called the entanglement of assistance (EA) while the minimum value is called the entanglement of formation (EF). An appropriate choice of the basis set of local measurement will correspond to an optimal value of S bar ; we find here a generic optimality condition for the choice of the basis set. In the present context, we analyze the tripartite states W and GHZ and show how they are fundamentally different.

  2. Bipartite entanglement in continuous-variable tripartite systems

    NASA Astrophysics Data System (ADS)

    Olsen, M. K.; Corney, J. F.

    2016-11-01

    In the field of continuous-variable tripartite entanglement, the systems utilised can be either asymmetric or symmetric. It is therefore of interest to examine the differences in the entanglement properties of these two types of system, using two examples that are known to produce tripartite entanglement. We examine one asymmetric and one fully symmetric Gaussian continuous-variable system in terms of their tripartite and bipartite entanglement properties. We first treat pure states and are able to find analytic solutions using the undepleted pump approximation for the Hamiltonian models. Our symmetric system exhibits perfect tripartite correlations, but only in the unphysical limit of infinite squeezing. For more realistic squeezing parameters, the two systems exhibit both tripartite and bipartite entanglement. Secondly we treat the more experimentally reasonable situation where the interactions take place inside optical cavities and we are dealing with mixed states. In these cases, where the criteria for genuine tripartite entanglement are more stringent, we find that tripartite entanglement is still available, although over smaller bandwidths than three-mode inseparability. In general, the spectral results are consistent with the analytical solutions. We conclude that none of the outputs are completely analogous to either GHZ or W states, but there are parameter regions of the Hamiltonian dynamics where they produce T states as introduced by Adesso et al. [1,2]. In the intracavity cases, both bipartite entanglement and tripartite inseparability are always present, with genuine tripartite entanglement appearing as the pumping rate is increased. The qualitative differences in the output states for different interaction parameters indicate that continuous-variable tripartite quantum information systems offer a versatility not found in two-mode bipartite systems.

  3. An annealed chaotic maximum neural network for bipartite subgraph problem.

    PubMed

    Wang, Jiahai; Tang, Zheng; Wang, Ronglong

    2004-04-01

    In this paper, based on maximum neural network, we propose a new parallel algorithm that can help the maximum neural network escape from local minima by including a transient chaotic neurodynamics for bipartite subgraph problem. The goal of the bipartite subgraph problem, which is an NP- complete problem, is to remove the minimum number of edges in a given graph such that the remaining graph is a bipartite graph. Lee et al. presented a parallel algorithm using the maximum neural model (winner-take-all neuron model) for this NP- complete problem. The maximum neural model always guarantees a valid solution and greatly reduces the search space without a burden on the parameter-tuning. However, the model has a tendency to converge to a local minimum easily because it is based on the steepest descent method. By adding a negative self-feedback to the maximum neural network, we proposed a new parallel algorithm that introduces richer and more flexible chaotic dynamics and can prevent the network from getting stuck at local minima. After the chaotic dynamics vanishes, the proposed algorithm is then fundamentally reined by the gradient descent dynamics and usually converges to a stable equilibrium point. The proposed algorithm has the advantages of both the maximum neural network and the chaotic neurodynamics. A large number of instances have been simulated to verify the proposed algorithm. The simulation results show that our algorithm finds the optimum or near-optimum solution for the bipartite subgraph problem superior to that of the best existing parallel algorithms.

  4. Toward edge minability for role mining in bipartite networks

    NASA Astrophysics Data System (ADS)

    Dong, Lijun; Wang, Yi; Liu, Ran; Pi, Benjie; Wu, Liuyi

    2016-11-01

    Bipartite network models have been extensively used in information security to automatically generate role-based access control (RBAC) from dataset. This process is called role mining. However, not all the topologies of bipartite networks are suitable for role mining; some edges may even reduce the quality of role mining. This causes unnecessary time consumption as role mining is NP-hard. Therefore, to promote the quality of role mining results, the capability that an edge composes roles with other edges, called the minability of edge, needs to be identified. We tackle the problem from an angle of edge importance in complex networks; that is an edge easily covered by roles is considered to be more important. Based on this idea, the k-shell decomposition of complex networks is extended to reveal the different minability of edges. By this way, a bipartite network can be quickly purified by excluding the low-minability edges from role mining, and thus the quality of role mining can be effectively improved. Extensive experiments via the real-world datasets are conducted to confirm the above claims.

  5. Continuous-time quantum walks on directed bipartite graphs

    NASA Astrophysics Data System (ADS)

    Tödtli, Beat; Laner, Monika; Semenov, Jouri; Paoli, Beatrice; Blattner, Marcel; Kunegis, Jérôme

    2016-11-01

    This paper investigates continuous-time quantum walks on directed bipartite graphs based on a graph's adjacency matrix. We prove that on bipartite graphs, probability transport between the two node partitions can be completely suppressed by tuning a model parameter α . We provide analytic solutions to the quantum walks for the star and circulant graph classes that are valid for an arbitrary value of the number of nodes N , time t , and the model parameter α . We discuss quantitative and qualitative aspects of quantum walks based on directed graphs and their undirected counterparts. Numerical simulations of quantum walks on circulant graphs show complex interference phenomena and how complete suppression of transport is achieved near α =π /2 . By proving two mirror symmetries around α =0 and π /2 we show that these quantum walks have a period of π in α . We show that undirected edges lose their effect on the quantum walk at α =π /2 and present non-bipartite graphs that exhibit suppression of transport. Finally, we analytically compute the Hamiltonians of quantum walks on the directed ring graph.

  6. Quantum discord of bipartite entangled non-linear coherent states

    NASA Astrophysics Data System (ADS)

    Castro, E.; Zambrano, A.; Ladera, C. L.; Gómez, R.

    2013-11-01

    Quantum discord measures the fraction of the pair-wise mutual information that is locally inaccessible in a multipartite system. Nonzero quantum discord has interesting and significant applications because although non-zero entanglement guarantees the existence of quantum correlation in a bipartite quantum system, zero entanglement does not guarantee the absence of a quantum correlation. On the other hand, many quantum optics systems can be described as deformed quantum oscillators. In this work, we investigate the quantum discord of bipartite entangled nonlinear coherent states, in the context of the so-called f-deformed coherent states algebra. To calculate the quantum discord, we consider quasi- Werner mixed states bases on bipartite entangled f-deformed coherent states. Two explicit analytic expressions are derived for the quantum discord of two different nonlinear deformed coherent states. The first one considers deformed coherent states obtained as eigenstates of the annihilation deformed operator, and the second one is obtained by using a deformed displacement operator. We compare the quantum discord of those states, when the nonlinear deformation function is either associated with the SU(1,1) coherent states in the Gilmore-Perelomov or Barut-Girardello representations, respectively.

  7. Implementation of bipartite or remote unitary gates with repeater nodes

    NASA Astrophysics Data System (ADS)

    Yu, Li; Nemoto, Kae

    2016-08-01

    We propose some protocols to implement various classes of bipartite unitary operations on two remote parties with the help of repeater nodes in-between. We also present a protocol to implement a single-qubit unitary with parameters determined by a remote party with the help of up to three repeater nodes. It is assumed that the neighboring nodes are connected by noisy photonic channels, and the local gates can be performed quite accurately, while the decoherence of memories is significant. A unitary is often a part of a larger computation or communication task in a quantum network, and to reduce the amount of decoherence in other systems of the network, we focus on the goal of saving the total time for implementing a unitary including the time for entanglement preparation. We review some previously studied protocols that implement bipartite unitaries using local operations and classical communication and prior shared entanglement, and apply them to the situation with repeater nodes without prior entanglement. We find that the protocols using piecewise entanglement between neighboring nodes often require less total time compared to preparing entanglement between the two end nodes first and then performing the previously known protocols. For a generic bipartite unitary, as the number of repeater nodes increases, the total time could approach the time cost for direct signal transfer from one end node to the other. We also prove some lower bounds of the total time when there are a small number of repeater nodes. The application to position-based cryptography is discussed.

  8. Forensic Identification of Bipartite Patella Misdiagnosed as Patella Fracture.

    PubMed

    Ma, Jingyuan; Shi, Fang; Huang, Chongya; Gu, Shanzhi

    2017-02-15

    Bipartite patella is recognized as a developmental anomaly of ossification. Most of them are asymptomatic and are discovered incidentally. Bipartite patella is sometimes misdiagnosed as a patella fracture, because the x-ray images of both these conditions may appear very similar. In this case, the patient complained of left knee pain after x-ray films revealed a fracture-like line in the left patella. The patient was then diagnosed as having a patella fracture. In China, the injury degree is categorized as serious injury, minor injury, and trivial injury. As the injury degree of patellar fracture is identified as minor injury, the defendant who injured the patient will be sentenced to prison for ≤3 years. However, the defendant objected to this judgment and applied for the second evaluation of injury degree. On the basis of the site of injury, clinical manifestations, and imaging findings, we diagnosed the patient with bipartite patella which belongs to normal anatomic variant. Therefore, the injury degree of the patient was not minor injury.

  9. Autonomous taxis could greatly reduce greenhouse-gas emissions of US light-duty vehicles

    NASA Astrophysics Data System (ADS)

    Greenblatt, Jeffery B.; Saxena, Samveg

    2015-09-01

    Autonomous vehicles (AVs) are conveyances to move passengers or freight without human intervention. AVs are potentially disruptive both technologically and socially, with claimed benefits including increased safety, road utilization, driver productivity and energy savings. Here we estimate 2014 and 2030 greenhouse-gas (GHG) emissions and costs of autonomous taxis (ATs), a class of fully autonomous shared AVs likely to gain rapid early market share, through three synergistic effects: (1) future decreases in electricity GHG emissions intensity, (2) smaller vehicle sizes resulting from trip-specific AT deployment, and (3) higher annual vehicle-miles travelled (VMT), increasing high-efficiency (especially battery-electric) vehicle cost-effectiveness. Combined, these factors could result in decreased US per-mile GHG emissions in 2030 per AT deployed of 87-94% below current conventionally driven vehicles (CDVs), and 63-82% below projected 2030 hybrid vehicles, without including other energy-saving benefits of AVs. With these substantial GHG savings, ATs could enable GHG reductions even if total VMT, average speed and vehicle size increased substantially. Oil consumption would also be reduced by nearly 100%.

  10. Comparison of methods for the detection of node group membership in bipartite networks

    NASA Astrophysics Data System (ADS)

    Sawardecker, E. N.; Amundsen, C. A.; Sales-Pardo, M.; Amaral, L. A. N.

    2009-12-01

    Most real-world networks considered in the literature have a modular structure. Analysis of these real-world networks often are performed under the assumption that there is only one type of node. However, social and biochemical systems are often bipartite networks, meaning that there are two exclusive sets of nodes, and that edges run exclusively between nodes belonging to different sets. Here we address the issue of module detection in bipartite networks by comparing the performance of two classes of group identification methods - modularity maximization and clique percolation - on an ensemble of modular random bipartite networks. We find that the modularity maximization methods are able to reliably detect the modular bipartite structure, and that, under some conditions, the simulated annealing method outperforms the spectral decomposition method. We also find that the clique percolation methods are not capable of reliably detecting the modular bipartite structure of the bipartite model networks considered.

  11. Nonconstant Positive Steady States and Pattern Formation of 1D Prey-Taxis Systems

    NASA Astrophysics Data System (ADS)

    Wang, Qi; Song, Yang; Shao, Lingjie

    2016-08-01

    Prey-taxis is the process that predators move preferentially toward patches with highest density of prey. It is well known to have an important role in biological control and the maintenance of biodiversity. To model the coexistence and spatial distributions of predator and prey species, this paper concerns nonconstant positive steady states of a wide class of prey-taxis systems with general functional responses over 1D domain. Linearized stability of the positive equilibrium is analyzed to show that prey-taxis destabilizes prey-predator homogeneity when prey repulsion (e.g., due to volume-filling effect in predator species or group defense in prey species) is present, and prey-taxis stabilizes the homogeneity otherwise. Then, we investigate the existence and stability of nonconstant positive steady states to the system through rigorous bifurcation analysis. Moreover, we provide detailed and thorough calculations to determine properties such as pitchfork and turning direction of the local branches. Our stability results also provide a stable wave mode selection mechanism for thee reaction-advection-diffusion systems including prey-taxis models considered in this paper. Finally, we provide numerical studies of prey-taxis systems with Holling-Tanner kinetics to illustrate and support our theoretical findings. Our numerical simulations demonstrate that the 2× 2 prey-taxis system is able to model the formation and evolution of various striking patterns, such as spikes, periodic oscillations, and coarsening even when the domain is one-dimensional. These dynamics can model the coexistence and spatial distributions of interacting prey and predator species. We also give some insights on how system parameters influence pattern formation in these models.

  12. Nonconstant Positive Steady States and Pattern Formation of 1D Prey-Taxis Systems

    NASA Astrophysics Data System (ADS)

    Wang, Qi; Song, Yang; Shao, Lingjie

    2017-02-01

    Prey-taxis is the process that predators move preferentially toward patches with highest density of prey. It is well known to have an important role in biological control and the maintenance of biodiversity. To model the coexistence and spatial distributions of predator and prey species, this paper concerns nonconstant positive steady states of a wide class of prey-taxis systems with general functional responses over 1D domain. Linearized stability of the positive equilibrium is analyzed to show that prey-taxis destabilizes prey-predator homogeneity when prey repulsion (e.g., due to volume-filling effect in predator species or group defense in prey species) is present, and prey-taxis stabilizes the homogeneity otherwise. Then, we investigate the existence and stability of nonconstant positive steady states to the system through rigorous bifurcation analysis. Moreover, we provide detailed and thorough calculations to determine properties such as pitchfork and turning direction of the local branches. Our stability results also provide a stable wave mode selection mechanism for thee reaction-advection-diffusion systems including prey-taxis models considered in this paper. Finally, we provide numerical studies of prey-taxis systems with Holling-Tanner kinetics to illustrate and support our theoretical findings. Our numerical simulations demonstrate that the 2× 2 prey-taxis system is able to model the formation and evolution of various striking patterns, such as spikes, periodic oscillations, and coarsening even when the domain is one-dimensional. These dynamics can model the coexistence and spatial distributions of interacting prey and predator species. We also give some insights on how system parameters influence pattern formation in these models.

  13. Electrical nature of the taxis signal in cyanobacteria.

    PubMed

    Murvanidze, G V; Glagolev, A N

    1982-04-01

    Electrical events after a light-dark stimulus were studied in the multicellular organism Phormidium uncinatum. Normally, such a stimulus causes the gliding trichome to reverse direction. By directing a large light spot on the end of a batch of trichomes and then switching it off, we achieved synchronization of the trichomes, since the "head" is much more sensitive than the "tail." The abrupt disappearance of a uniform light produced a depolarization wave which initiated at the head, as registered by externally applied electrodes. The second stimulus produced a depolarization of the opposite direction, reflecting the reorientation of the trichomes. No electrical response was observed at Ca2+ concentrations less than or equal to 10(-8) M. Factors causing oscillatory reversals, i.e., a combination of Ca2+ and A23187, or a viscous environment also abolished the electrical signal. Changes in an externally applied electrical field (4 V/cm2) had little effect on the motile behavior of P. uncinatum or Oscillatoria princeps. However, in the presence of 5 microM Ca2+-1 microM A23187, all the trichomes reversed synchronously to the anode after a change in polarity of an externally applied electrical field. We suggest that an increased Ca2+ concentration together with a change in delta psi (or delta mu H+) represents the taxis signal in cyanobacteria.

  14. Aircraft Energy Conservation during Airport Ground Operations

    DTIC Science & Technology

    1982-03-01

    PUSHBACK 3-1 TAXIING OUT OR IN WITH ONE OR MORE ENGINES SHUTDOWN. . 3-2 PLANNING LANDING ROLL, TURN-OFF AND TAXIING TO THE TERMINAL WITH THE MOST...DIRECT ROUTING 3-3 GATE HOLD PROCEDURES 3-3 FUEL LOAD PLANNING PRACTICES 3-5 AIRLINE OPERATION PRACTICES 3-6 IMPACT OF ENERGY CONSERVATION MEASURES...ENGINES SHUTDOWN G-6 PLANNING LANDING ROLL TURN-OFF AND TAXIING TO THE TERMINAL WITH THE MOST DIRECT ROUTING G-12 GATE HOLD PROCEDURES G-20 FUEL

  15. Prevalence and factors associated with road traffic crash among taxi drivers in Hanoi, Vietnam.

    PubMed

    La, Quang Ngoc; Lee, Andy H; Meuleners, Lynn B; Van Duong, Dat

    2013-01-01

    Injury due to road traffic crash is a major cause of ill health and premature deaths in developing countries. Taxis provide a main mode of public transport in Vietnam but there has been little research on the risk of crash for taxi drivers. This retrospective study collected information on taxi crashes for the period 2006-2009 by interviewing drivers from five taxi companies in Hanoi, Vietnam, using a structured questionnaire. Of the total 1214 participants recruited, 276 drivers reported at least one crash, giving an overall crash prevalence of 22.7%. Among the crashed group, 50 drivers (18.1%) were involved in two to four crashes. Logistic regression analysis further identified age of driver, type of driving licence, employment status, perceived sufficiency of income, seat-belt usage, and traffic infringement history to be significantly associated with the crash risk. Further prospective and qualitative studies are recommended to provide detailed crash characteristics as well as behaviour and perception of taxi drivers, so that an effective intervention can be developed to improve road safety and to prevent injury of these commercial drivers.

  16. Hematocrit levels as cardiovascular risk among taxi drivers in Bangkok, Thailand.

    PubMed

    Ishimaru, Tomohiro; Arphorn, Sara; Jirapongsuwan, Ann

    2016-10-08

    In Thailand, taxi drivers employed in the informal sector often experience hazardous working conditions. Previous studies revealed that elevated Hematocrit (HCT) is a predictor of cardiovascular disease (CVD) risk. This study assessed factors associated with HCT in taxi drivers to predict their occupational CVD risk factors. A cross-sectional study was conducted on 298 male taxi drivers who joined a health check-up campaign in Bangkok, Thailand. HCT and body mass index were retrieved from participant health check-up files. Self-administered questionnaires assessed demographics, driving mileage, working hours, and lifestyle. Statistical associations were analyzed using stepwise linear regression. Our results showed that obesity (p=0.007), daily alcohol drinking (p=0.003), and current or past smoking (p=0.016) were associated with higher HCT levels. While working hours were not directly associated with HCT levels in the current study, the effect on overworking is statistically arguable because most participants worked substantially longer hours. Our findings suggest that taxi drivers' CVD risk may be increased by their unhealthy work styles. Initiatives to improve general working conditions for taxi drivers should take into account health promotion and CVD prevention. The policy of providing periodic health check-ups is important to make workers in the informal sector aware of their health status.

  17. Discord as a quantum resource for bi-partite communication

    SciTech Connect

    Chrzanowski, Helen M.; Assad, Syed M.; Symul, Thomas; Lam, Ping Koy; Gu, Mile; Modi, Kavan; Vedral, Vlatko; Ralph, Timothy C.

    2014-12-04

    Coherent interactions that generate negligible entanglement can still exhibit unique quantum behaviour. This observation has motivated a search beyond entanglement for a complete description of all quantum correlations. Quantum discord is a promising candidate. Here, we experimentally demonstrate that under certain measurement constraints, discord between bipartite systems can be consumed to encode information that can only be accessed by coherent quantum interactions. The inability to access this information by any other means allows us to use discord to directly quantify this ‘quantum advantage’.

  18. 77 FR 12103 - Notice of Request for Approval of a New Information Collection: Exemptions for Air Taxi Operations

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-02-28

    ... Notice of Request for Approval of a New Information Collection: Exemptions for Air Taxi Operations AGENCY... the Paperwork Reduction Act of 1995, Public Law 104-13, this notice announces the intention of the... the following collection: Exemptions for Air Taxi Operations, responsibility for which has...

  19. Terminal area automatic navigation, guidance, and control 1: Automatic rollout, turnoff, and taxis

    NASA Technical Reports Server (NTRS)

    Pines, S.

    1981-01-01

    A study developed for the TCV B-737, designed to apply existing navigation aids plus magnetic leader cable signals and develop breaking and reverse thrust guidance laws to provide for rapid automated rollout, turnoff, and taxi to reduce runway occupation time for a wide variety of landing conditions for conventional commercial-type aircraft, is described. Closed loop guidance laws for braking and reverse thrust are derived for rollout, turnoff, and taxi, as functions of the landing speed, the desired taxi speed and the distance to go. Brake limitations for wet runway conditions and reverse thrust limitations are taken into account to provide decision rules to avoid tire skid and to choose an alternate turnoff point, farther down the runway, to accommodate extreme landing conditions.

  20. Aeroassisted manned transfer vehicle (TAXI) for advanced Mars Transportation: NASA/USRA 1987 Senior Design Project

    NASA Technical Reports Server (NTRS)

    1987-01-01

    A conceptual design study of an aeroassisted orbital transfer vehicle is discussed. Nicknamed TAXI, it will ferry personnel and cargo: (1) between low Earth orbit and a spacecraft circling around the Sun in permanent orbit intersecting gravitational fields of Earth and Mars, and (2) between the cycling spacecraft and a Mars orbiting station, co-orbiting with Phobos. Crew safety and mission flexibility (in terms of ability to provide a wide range of delta-V) were given high priority. Three versions were considered, using the same overall configuration based on a low L/D aerobrake with the geometry of a raked off elliptical cone with ellipsoidal nose and a toroidal skirt. The propulsion system consists of three gimballed LOX/LH2 engines firing away from the aerobrake. The versions differ mainly in the size of the aeroshields and propellant tanks. TAXI A version resulted from an initial effort to design a single transfer vehicle able to meet all delta-V requirements during the 15-year period (2025 to 2040) of Mars mission operations. TAXI B is designed to function with the cycling spacecraft moving in a simplified, nominal trajectory. On Mars missions, TAXI B would be able to meet the requirements of all the missions with a relative approach velocity near Mars of less than 9.3 km/sec. Finally, TAXI C is a revision of TAXI A, a transfer vehicle designed for missions with a relative velocity near Mars larger than 9.3 km/sec. All versions carry a crew of 9 (11 with modifications) and a cargo of 10000 lbm. Trip duration varies from 1 day for transfer from LEO to the cycling ship to nearly 5 days for transfer from the ship to the Phobos orbit.

  1. [Striate receptive fields mapped with single and bipartite stimuli].

    PubMed

    Lazareva, N A; Shevelev, I A; Saltykov, K A; Novikova, R V; Tikhomirov, A S; Sharaev, G A; Tsutskiridze, D Iu; Eĭdeland, P V

    2008-01-01

    In 22 acute experiments with anesthetized and immobilized adult cats, 364 maps of receptive fields (RF) of 47 striate neurons were obtained by means of single local stimuli flashed at different parts of the visual field, or with additional asynchronous activation of the RF excitatory center with oscillating bar of the optimal orientation. Under bipartite stimulation, considerable and significant decrease in the square and weight of the central excitatory RF zone was revealed in more then 75% of the studied cells. Additional excitatory zones appeared in 54% of cases, or the square and weight of the excitatory zones substantially increased, and inhibitory zones developed in 90% of cases. These effects were correlated with the degree of increase in the background firing during transition from the mode of mapping with single stimulation to that with bipartite stimulation. The mechanism and possible functional role of cooperative excitatory and inhibitory intracortical interactions in organization of receptive fields and detection of features of a visual image are discussed.

  2. Uncovering collective listening habits and music genres in bipartite networks.

    PubMed

    Lambiotte, R; Ausloos, M

    2005-12-01

    In this paper, we analyze web-downloaded data on people sharing their music library, that we use as their individual musical signatures. The system is represented by a bipartite network, nodes being the music groups and the listeners. Music groups' audience size behaves like a power law, but the individual music library size is an exponential with deviations at small values. In order to extract structures from the network, we focus on correlation matrices, that we filter by removing the least correlated links. This percolation idea-based method reveals the emergence of social communities and music genres, that are visualized by a branching representation. Evidence of collective listening habits that do not fit the neat usual genres defined by the music industry indicates an alternative way of classifying listeners and music groups. The structure of the network is also studied by a more refined method, based upon a random walk exploration of its properties. Finally, a personal identification-community imitation model for growing bipartite networks is outlined, following Potts ingredients. Simulation results do reproduce quite well the empirical data.

  3. Uncovering collective listening habits and music genres in bipartite networks

    NASA Astrophysics Data System (ADS)

    Lambiotte, R.; Ausloos, M.

    2005-12-01

    In this paper, we analyze web-downloaded data on people sharing their music library, that we use as their individual musical signatures. The system is represented by a bipartite network, nodes being the music groups and the listeners. Music groups’ audience size behaves like a power law, but the individual music library size is an exponential with deviations at small values. In order to extract structures from the network, we focus on correlation matrices, that we filter by removing the least correlated links. This percolation idea-based method reveals the emergence of social communities and music genres, that are visualized by a branching representation. Evidence of collective listening habits that do not fit the neat usual genres defined by the music industry indicates an alternative way of classifying listeners and music groups. The structure of the network is also studied by a more refined method, based upon a random walk exploration of its properties. Finally, a personal identification-community imitation model for growing bipartite networks is outlined, following Potts ingredients. Simulation results do reproduce quite well the empirical data.

  4. Valence bond distribution and correlation in bipartite Heisenberg antiferromagnets

    NASA Astrophysics Data System (ADS)

    Schwandt, David; Alet, Fabien; Oshikawa, Masaki

    2014-03-01

    Every singlet state of a quantum spin-1/2 system can be decomposed into a linear combination of valence bond basis states. The range of valence bonds within this linear combination as well as the correlations between them can reveal the nature of the singlet state and are key ingredients in variational calculations. In this work, we study the bipartite valence bond distributions and their correlations within the ground state of the Heisenberg antiferromagnet on bipartite lattices. In terms of field theory, this problem can be mapped to correlation functions near a boundary. In dimension d ≥2, a nonlinear σ model analysis reveals that at long distances the probability distribution P (r) of valence bond lengths decays as |r|-d-1 and that valence bonds are uncorrelated. By a bosonization analysis, we also obtain P(r )∝|r|-d-1 in d =1 despite the different mechanism. On the other hand, we find that correlations between valence bonds are important even at large distances in d =1, in stark contrast to d ≥2. The analytical results are confirmed by high-precision quantum Monte Carlo simulations in d =1, 2, and 3. We develop a single-projection loop variant of the valence bond projection algorithm, which is well designed to compute valence bond probabilities and for which we provide algorithmic details.

  5. Functional analysis of bipartite begomovirus coat protein promoter sequences

    SciTech Connect

    Lacatus, Gabriela; Sunter, Garry

    2008-06-20

    We demonstrate that the AL2 gene of Cabbage leaf curl virus (CaLCuV) activates the CP promoter in mesophyll and acts to derepress the promoter in vascular tissue, similar to that observed for Tomato golden mosaic virus (TGMV). Binding studies indicate that sequences mediating repression and activation of the TGMV and CaLCuV CP promoter specifically bind different nuclear factors common to Nicotiana benthamiana, spinach and tomato. However, chromatin immunoprecipitation demonstrates that TGMV AL2 can interact with both sequences independently. Binding of nuclear protein(s) from different crop species to viral sequences conserved in both bipartite and monopartite begomoviruses, including TGMV, CaLCuV, Pepper golden mosaic virus and Tomato yellow leaf curl virus suggests that bipartite begomoviruses bind common host factors to regulate the CP promoter. This is consistent with a model in which AL2 interacts with different components of the cellular transcription machinery that bind viral sequences important for repression and activation of begomovirus CP promoters.

  6. Cloning and characterization of a Pseudomonas aeruginosa gene involved in the negative regulation of phosphate taxis.

    PubMed

    Kato, J; Sakai, Y; Nikata, T; Ohtake, H

    1994-09-01

    Pseudomonas aeruginosa PAO1 exhibited a positive chemotactic response to P(i). The chemotactic response was induced by P(i) limitation. An alkaline phosphatase (AP) constitutive mutant showed a chemotactic response to P(i), regardless of whether the cells were starved for P(i). Sequence analysis and complementation studies showed that the P. aeruginosa phoU gene was involved both in the regulation of AP expression and in the induction of P(i) taxis. However, unlike AP expression, P(i) taxis was not regulated by the phoB gene product.

  7. Continuous lateral oscillations as a core mechanism for taxis in Drosophila larvae

    PubMed Central

    Wystrach, Antoine; Lagogiannis, Konstantinos; Webb, Barbara

    2016-01-01

    Taxis behaviour in Drosophila larva is thought to consist of distinct control mechanisms triggering specific actions. Here, we support a simpler hypothesis: that taxis results from direct sensory modulation of continuous lateral oscillations of the anterior body, sparing the need for ‘action selection’. Our analysis of larvae motion reveals a rhythmic, continuous lateral oscillation of the anterior body, encompassing all head-sweeps, small or large, without breaking the oscillatory rhythm. Further, we show that an agent-model that embeds this hypothesis reproduces a surprising number of taxis signatures observed in larvae. Also, by coupling the sensory input to a neural oscillator in continuous time, we show that the mechanism is robust and biologically plausible. The mechanism provides a simple architecture for combining information across modalities, and explaining how learnt associations modulate taxis. We discuss the results in the light of larval neural circuitry and make testable predictions. DOI: http://dx.doi.org/10.7554/eLife.15504.001 PMID:27751233

  8. [Association between psychosocial aspects of work and quality of life among motorcycle taxi drivers].

    PubMed

    Teixeira, Jules Ramon Brito; Boery, Eduardo Nagib; Casotti, Cezar Augusto; Araújo, Tânia Maria de; Pereira, Rafael; Ribeiro, Ícaro José Santos; Rios, Marcela Andrade; Amorim, Camila Rego; Moreira, Ramon Missias; Boery, Rita Narriman Silva de Oliveira; Sales, Zenilda Nogueira

    2015-01-01

    This study aimed to evaluate the quality of life of motorcycle taxi drivers and the association with psychosocial characteristics of their work. This was a cross-sectional epidemiological study with a sample of 400 motorcycle taxi drivers in Jequié, Bahia State, Brazil. The study used a form containing demographic and socioeconomic data, WHO Quality of Life-Bref Questionnaire (WHOQOL-Bref), and the Job Content Questionnaire (JCQ). Motorcycle taxi drivers with greater decision-making control over their work showed better self-rated quality of life in the psychological domain; those with high psychological demands presented better self-rated quality of life in the social relations and environmental domains; those with high strain and active work showed better self-rated quality of life in the social and environmental domains. The psychosocial work environment and especially decision-making autonomy were thus important determinants of self-rated quality of life in this group of motorcycle taxi drivers.

  9. 14 CFR Appendix C to Part 330 - Forms for Air Taxi Operators

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Forms for Air Taxi Operators C Appendix C to Part 330 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION (AVIATION PROCEEDINGS) PROCEDURAL REGULATIONS PROCEDURES FOR COMPENSATION OF AIR CARRIERS Pt. 330, App. C Appendix C...

  10. Comparing Unlabeled Pedigree Graphs via Covering with Bipartite and Path.

    PubMed

    Amar, Lamiaa A; Belal, Nahla A; Rashwan, Shaheera

    2016-11-01

    Family trees, also called pedigrees, have important information about an individual's past and future life. It can be used as a diagnostic tool and help guide decisions about genetic testing for the patient and at-risk family members. There are 2% to 10% of parent-child relationships missing, and this can cause large differences in the pedigree graphs created. Hence, the evaluation of pedigrees is an essential task. In this article, we focus on the problem of isomorphism of unlabeled subpedigrees with a large number of individuals and hundreds of families, given that the two pedigrees being evaluated are generational and mating is between external parents. We address two restricted versions of the unlabeled subpedigree graph problem, Cover Unlabeled subPedigree with a Bipartite graph (CUPB), and Cover Unlabeled subPedigree with a Path (CUPP) problems. Fixed parameter algorithms are presented to solve the two problems, CUPB and CUPP.

  11. Entanglement monotones and transformations of symmetric bipartite states

    NASA Astrophysics Data System (ADS)

    Girard, Mark W.; Gour, Gilad

    2017-01-01

    The primary goal in the study of entanglement as a resource theory is to find conditions that determine when one quantum state can or cannot be transformed into another via local operations and classical communication operations. This is typically done through entanglement monotones or conversion witnesses. Such quantities cannot be computed for arbitrary quantum states in general, but it is useful to consider classes of symmetric states for which closed-form expressions can be found. In this paper, we show how to compute the convex roof of any entanglement monotone for all Werner states. The convex roofs of the well-known Vidal monotones are computed for all isotropic states, and we show how this method can generalize to other entanglement measures and other types of symmetries as well. We also present necessary and sufficient conditions that determine when a pure bipartite state can be deterministically converted into a Werner state or an isotropic state.

  12. No-signaling, perfect bipartite dichotomic correlations and local randomness

    SciTech Connect

    Seevinck, M. P.

    2011-03-28

    The no-signaling constraint on bi-partite correlations is reviewed. It is shown that in order to obtain non-trivial Bell-type inequalities that discern no-signaling correlations from more general ones, one must go beyond considering expectation values of products of observables only. A new set of nontrivial no-signaling inequalities is derived which have a remarkably close resemblance to the CHSH inequality, yet are fundamentally different. A set of inequalities by Roy and Singh and Avis et al., which is claimed to be useful for discerning no-signaling correlations, is shown to be trivially satisfied by any correlation whatsoever. Finally, using the set of newly derived no-signaling inequalities a result with potential cryptographic consequences is proven: if different parties use identical devices, then, once they have perfect correlations at spacelike separation between dichotomic observables, they know that because of no-signaling the local marginals cannot but be completely random.

  13. Spin-1 Dirac-Weyl fermions protected by bipartite symmetry

    SciTech Connect

    Lin, Zeren; Liu, Zhirong

    2015-12-07

    We propose that bipartite symmetry allows spin-1 Dirac-Weyl points, a generalization of the spin-1/2 Dirac points in graphene, to appear as topologically protected at the Fermi level. In this spirit, we provide methodology to construct spin-1 Dirac-Weyl points of this kind in a given 2D space group and get the classification of the known spin-1 systems in the literature. We also apply the workflow to predict two new systems, P3m1-9 and P31m-15, to possess spin-1 at K/K′ in the Brillouin zone of hexagonal lattice. Their stability under various strains is investigated and compared with that of T{sub 3}, an extensively studied model of ultracold atoms trapped in optical lattice with spin-1 also at K/K′.

  14. Locally indistinguishable orthogonal product bases in arbitrary bipartite quantum system

    PubMed Central

    Xu, Guang-Bao; Yang, Ying-Hui; Wen, Qiao-Yan; Qin, Su-Juan; Gao, Fei

    2016-01-01

    As we know, unextendible product basis (UPB) is an incomplete basis whose members cannot be perfectly distinguished by local operations and classical communication. However, very little is known about those incomplete and locally indistinguishable product bases that are not UPBs. In this paper, we first construct a series of orthogonal product bases that are completable but not locally distinguishable in a general m ⊗ n (m ≥ 3 and n ≥ 3) quantum system. In particular, we give so far the smallest number of locally indistinguishable states of a completable orthogonal product basis in arbitrary quantum systems. Furthermore, we construct a series of small and locally indistinguishable orthogonal product bases in m ⊗ n (m ≥ 3 and n ≥ 3). All the results lead to a better understanding of the structures of locally indistinguishable product bases in arbitrary bipartite quantum system. PMID:27503634

  15. Minkowski structure for purity and entanglement of Gaussian bipartite states

    NASA Astrophysics Data System (ADS)

    de Oliveira, Marcos C.; Nicacio, Fernando; Mizrahi, Salomon S.

    2013-11-01

    The relation between the symplectic and Lorentz groups is explored to investigate entanglement features in a two-mode bipartite Gaussian state. We verify that the correlation matrix of arbitrary Gaussian states can be associated with a hyperbolic space with a Minkowski metric, which is divided in two regions: separabilitylike and entanglementlike, in equivalence to timelike and spacelike in special relativity. This correspondence naturally allows the definition of two insightful invariant squared distance measures: one related to the purity and another related to amount of entanglement. The second distance allows us to define a measure for entanglement in terms of the invariant interval between the given state and its closest separable state, given in a natural manner without the requirement of a minimization procedure.

  16. Evolution of taxis responses in virtual bacteria: non-adaptive dynamics.

    PubMed

    Goldstein, Richard A; Soyer, Orkun S

    2008-05-23

    Bacteria are able to sense and respond to a variety of external stimuli, with responses that vary from stimuli to stimuli and from species to species. The best-understood is chemotaxis in the model organism Escherichia coli, where the dynamics and the structure of the underlying pathway are well characterised. It is not clear, however, how well this detailed knowledge applies to mechanisms mediating responses to other stimuli or to pathways in other species. Furthermore, there is increasing experimental evidence that bacteria integrate responses from different stimuli to generate a coherent taxis response. We currently lack a full understanding of the different pathway structures and dynamics and how this integration is achieved. In order to explore different pathway structures and dynamics that can underlie taxis responses in bacteria, we perform a computational simulation of the evolution of taxis. This approach starts with a population of virtual bacteria that move in a virtual environment based on the dynamics of the simple biochemical pathways they harbour. As mutations lead to changes in pathway structure and dynamics, bacteria better able to localise with favourable conditions gain a selective advantage. We find that a certain dynamics evolves consistently under different model assumptions and environments. These dynamics, which we call non-adaptive dynamics, directly couple tumbling probability of the cell to increasing stimuli. Dynamics that are adaptive under a wide range of conditions, as seen in the chemotaxis pathway of E. coli, do not evolve in these evolutionary simulations. However, we find that stimulus scarcity and fluctuations during evolution results in complex pathway dynamics that result both in adaptive and non-adaptive dynamics depending on basal stimuli levels. Further analyses of evolved pathway structures show that effective taxis dynamics can be mediated with as few as two components. The non-adaptive dynamics mediating taxis responses

  17. Aerotaxis and other energy-sensing behavior in bacteria.

    PubMed

    Taylor, B L; Zhulin, I B; Johnson, M S

    1999-01-01

    Energy taxis is widespread in motile bacteria and in some species is the only known behavioral response. The bacteria monitor their cellular energy levels and respond to a decrease in energy by swimming to a microenvironment that reenergizes the cells. This is in contrast to classical Escherichia coli chemotaxis in which sensing of stimuli is independent of cellular metabolism. Energy taxis encompasses aerotaxis (taxis to oxygen), phototaxis, redox taxis, taxis to alternative electron acceptors, and chemotaxis to a carbon source. All of these responses share a common signal transduction pathway. An environmental stimulus, such as oxygen concentration or light intensity, modulates the flow of reducing equivalents through the electron transport system. A transducer senses the change in electron transport, or possibly a related parameter such as proton motive force, and initiates a signal that alters the direction of swimming. The Aer and Tsr proteins in E. coli are newly recognized transducers for energy taxis. Aer is homologous to E. coli chemoreceptors but unique in having a PAS domain and a flavin-adenine dinucleotide cofactor that is postulated to interact with a component of the electron transport system. PAS domains are energy-sensing modules that are found in proteins from archaea to humans. Tsr, the serine chemoreceptor, is an independent transducer for energy taxis, but its sensory mechanism is unknown. Energy taxis has a significant ecological role in vertical stratification of microorganisms in microbial mats and water columns. It plays a central role in the behavior of magnetotactic bacteria and also appears to be important in plant-microbe interactions.

  18. Effect of Surface Traffic Count on Taxi Time at Dallas-Fort Worth (DFW) International Airport

    NASA Technical Reports Server (NTRS)

    Kistler, Matthew Stephen; Gupta, Gautam

    2008-01-01

    As the amount of air traffic increases over the years, most airports simply do not have the means of expanding to handle the intensified traffic on the surface that will ensue. Precise surveillance equipment and automation concepts, as well as advanced surface traffic algorithms are being developed to improve airport efficiency. These surface algorithms require inputs unique to each airport to ensure maximum efficiency, and minimal taxi delay. This study analyzes surface traffic at Dallas-Fort Worth International Airport (DFW) to determine the effect of the number of aircraft on the surface and the amount of stop and go situations they experience to the amount of additional taxi time encountered. If the surface capacity of an airport is known, minimal delay can be accomplished by limiting the number of taxiing aircraft to that capacity. This concept is related to highways, where traffic flow drastically decreases as more cars occupy the road. An attempt to minimize this effect on highways is seen with the use of metering lights at freeway on-ramps. Since the surface traffic at airports is highly regulated, and aircraft are less mobile on the ground, limiting the surface count to a certain number can greatly reduce the amount of additional taxi time encountered, as well as reduce hazardous emissions. This study will also find the regions of an airport that encounter the most additional taxi time when the number of aircraft in that area is increased. This could help surface traffic algorithms avoid congesting that area, or re-route aircraft to different runways when that area reaches its capacity. The relationship between the amount of stop and go situations an aircraft encounters and their effect on the taxi time of that aircraft will also be investigated. This will help to determine the effect of holding an aircraft on the taxiway as opposed to re-routing it. The lesser of the two should be used when developing surface traffic algorithms to further minimize the

  19. The Structure of Bipartite Quantum States - Insights from Group Theory and Cryptography

    NASA Astrophysics Data System (ADS)

    Christandl, Matthias

    2006-04-01

    This thesis presents a study of the structure of bipartite quantum states. In the first part, the representation theory of the unitary and symmetric groups is used to analyse the spectra of quantum states. In particular, it is shown how to derive a one-to-one relation between the spectra of a bipartite quantum state and its reduced states, and the Kronecker coefficients of the symmetric group. In the second part, the focus lies on the entanglement of bipartite quantum states. Drawing on an analogy between entanglement distillation and secret-key agreement in classical cryptography, a new entanglement measure, `squashed entanglement', is introduced.

  20. Teleportation and entanglement distillation in the presence of correlation among bipartite mixed states

    SciTech Connect

    Hamada, Mitsuru

    2003-07-01

    The teleportation channel associated with an arbitrary bipartite state denotes the map that represents the change suffered by a teleported state when the bipartite state is used instead of the ideal maximally entangled state for teleportation. This work presents and proves an explicit expression of the teleportation channel for teleportation using Weyl's projective unitary representation of (Z/dZ){sup 2n} for integers d{>=}2, n{>=}1, which has been known for n=1. This formula allows any correlation among the n bipartite mixed states, and an application shows the existence of reliable schemes for distillation of entanglement from a sequence of mixed states with correlation.

  1. Sudden Transition between Classical to Quantum Decoherence in bipartite correlated Qutrit Systems

    NASA Astrophysics Data System (ADS)

    Cárdenas-López, F. A.; Allende, S.; Retamal, J. C.

    2017-03-01

    Classical to quantum decoherence transition, an issue existing for incoherent superposition of Bell-diagonal states is studied for three dimensional bipartite AB mixed quantum systems. Depending on the initial conditions, the dynamics of classical and quantum correlations can exhibit a sudden transition between classical to quantum decoherence. This result is calculated numerically by using entropic and geometric measures of correlations. An alternative explanation for this effect could be obtained by extending the bipartite A ⊗ B qutrit system to a pure tripartite A ⊗ B ⊗ C system. The freezing of classical correlations in AB is related to a freezing of the entanglement in the AC bipartition.

  2. Asystasia mosaic Madagascar virus: a novel bipartite begomovirus infecting the weed Asystasia gangetica in Madagascar.

    PubMed

    De Bruyn, Alexandre; Harimalala, Mireille; Hoareau, Murielle; Ranomenjanahary, Sahondramalala; Reynaud, Bernard; Lefeuvre, Pierre; Lett, Jean-Michel

    2015-06-01

    Here, we describe for the first time the complete genome sequence of a new bipartite begomovirus in Madagascar isolated from the weed Asystasia gangetica (Acanthaceae), for which we propose the tentative name asystasia mosaic Madagascar virus (AMMGV). DNA-A and -B nucleotide sequences of AMMGV were only distantly related to known begomovirus sequence and shared highest nucleotide sequence identity of 72.9 % (DNA-A) and 66.9 % (DNA-B) with a recently described bipartite begomovirus infecting Asystasia sp. in West Africa. Phylogenetic analysis demonstrated that this novel virus from Madagascar belongs to a new lineage of Old World bipartite begomoviruses.

  3. Sudden Transition between Classical to Quantum Decoherence in bipartite correlated Qutrit Systems.

    PubMed

    Cárdenas-López, F A; Allende, S; Retamal, J C

    2017-03-20

    Classical to quantum decoherence transition, an issue existing for incoherent superposition of Bell-diagonal states is studied for three dimensional bipartite AB mixed quantum systems. Depending on the initial conditions, the dynamics of classical and quantum correlations can exhibit a sudden transition between classical to quantum decoherence. This result is calculated numerically by using entropic and geometric measures of correlations. An alternative explanation for this effect could be obtained by extending the bipartite A ⊗ B qutrit system to a pure tripartite A ⊗ B ⊗ C system. The freezing of classical correlations in AB is related to a freezing of the entanglement in the AC bipartition.

  4. On-road emission characteristics of CNG-fueled bi-fuel taxis

    NASA Astrophysics Data System (ADS)

    Yao, Zhiliang; Cao, Xinyue; Shen, Xianbao; Zhang, Yingzhi; Wang, Xintong; He, Kebin

    2014-09-01

    To alleviate air pollution and lessen the petroleum demand from the motor vehicle sector in China, natural gas vehicles (NGVs) have been rapidly developed over the last several years. However, the understanding of the real-world emissions of NGVs is very limited. In this study, the emissions from 20 compressed-natural-gas-fueled bi-fuel taxis were measured using a portable emission measurement system (PEMS) under actual driving conditions in Yichang, China. The emission characteristics of the tested vehicles were analyzed, revealing that the average CO2, CO, HC and NOx emissions from the tested compressed-natural-gas (CNG) taxis under urban driving conditions were 1.6, 4.0, 2.0 and 0.98 times those under highway road conditions, respectively. The CO, HC and NOx emissions from Euro 3 CNG vehicles were approximately 40%, 55% and 44% lower than those from Euro 2 vehicles, respectively. Compared with the values for light-duty gasoline vehicles reported in the literature, the CO2 and CO emissions from the tested CNG taxis were clearly lower; however, significant increases in the HC and NOx emissions were observed. Finally, we normalized the emissions under the actual driving cycles of the entire test route to the New European Driving Cycle (NEDC)-based emissions using a VSP modes method developed by North Carolina State University. The simulated NEDC-based CO emissions from the tested CNG taxis were better than the corresponding emissions standards, whereas the simulated NEDC-based HC and NOx emissions greatly exceeded the standards. Thus, more attention should be paid to the emissions from CNG vehicles. As for the CNG-fueled bi-fuel taxis currently in use, the department of environmental protection should strengthen their inspection and supervision to reduce the emissions from these vehicles. The results of this study will be helpful in understanding and controlling emissions from CNG-fueled bi-fuel vehicles in China.

  5. Common neighbours and the local-community-paradigm for topological link prediction in bipartite networks

    NASA Astrophysics Data System (ADS)

    Daminelli, Simone; Thomas, Josephine Maria; Durán, Claudio; Vittorio Cannistraci, Carlo

    2015-11-01

    Bipartite networks are powerful descriptions of complex systems characterized by two different classes of nodes and connections allowed only across but not within the two classes. Unveiling physical principles, building theories and suggesting physical models to predict bipartite links such as product-consumer connections in recommendation systems or drug-target interactions in molecular networks can provide priceless information to improve e-commerce or to accelerate pharmaceutical research. The prediction of nonobserved connections starting from those already present in the topology of a network is known as the link-prediction problem. It represents an important subject both in many-body interaction theory in physics and in new algorithms for applied tools in computer science. The rationale is that the existing connectivity structure of a network can suggest where new connections can appear with higher likelihood in an evolving network, or where nonobserved connections are missing in a partially known network. Surprisingly, current complex network theory presents a theoretical bottle-neck: a general framework for local-based link prediction directly in the bipartite domain is missing. Here, we overcome this theoretical obstacle and present a formal definition of common neighbour index and local-community-paradigm (LCP) for bipartite networks. As a consequence, we are able to introduce the first node-neighbourhood-based and LCP-based models for topological link prediction that utilize the bipartite domain. We performed link prediction evaluations in several networks of different size and of disparate origin, including technological, social and biological systems. Our models significantly improve topological prediction in many bipartite networks because they exploit local physical driving-forces that participate in the formation and organization of many real-world bipartite networks. Furthermore, we present a local-based formalism that allows to intuitively

  6. Respiratory symptoms and lung function in garage workers and taxi drivers.

    PubMed

    Bener, A; Galadari, I; al-Mutawa, J K; al-Maskari, F; Das, M; Abuzeid, M S

    1998-12-01

    The aim of this study was to determine the prevalence of some respiratory symptoms and possible diseases among occupationally-exposed garage workers and taxi drivers. This study involved 158 garage workers and 165 taxi drivers, matched for age, sex, nationality and duration of employment. The mean age of 158 Indian subcontinent garage workers was 34.4 +/- 10.4 years; their mean height and weight were 167.7 +/- 6.6 cm and 72.0 +/- 12.3 kg respectively, and the mean duration of employment garage workers was 8.8 +/- 7.6 years. The mean age of 165 Indian subcontinent male taxi drivers was 34.5 +/- 7.7 years; their mean height and weight were 168.7 +/- 6.1 cm and 71.3 +/- 12.6 kg respectively; and the mean duration of employment was 7.5 +/- 5.4 years. The data on chronic respiratory symptoms showed that garage workers had higher prevalence of symptoms than taxi drivers being significantly greater for chronic phlegm, (p < 0.007); dyspneoa (p < 0.001); and sinusitis (p < 0.03). A higher prevalence of all acute symptoms was recorded in garage workers than in taxi drivers, although the differences were significant only for throat (p < 0.02), hearing problems (p < 0.002); nose (dryness, bleeding and secretion) (p < 0.008); and low back pain (p < 0.05). Almost all forced spirometric tests in the exposed garage workers were lower than in taxi drivers. The results of stepwise multiple regression analysis showed that only phlegm, sinusitis, hearing problems, nasal catarrh, throat, low back pain, smoking and FEF25-75, variables were statistically significant predictors as risk factors. In conclusion, the present study suggests that a high prevalence of respiratory symptoms is associated with exposure to motor vehicle exhaust emission in garage working places. Long-term working as garage workers in the United Arab Emirates (UAE), may be associated with the development of chronic respiratory symptoms and have effects on their daily life and health.

  7. Bipartite medial cuneiform: new frequencies from skeletal collections and a meta-analysis of previous cases.

    PubMed

    Burnett, S E; Case, D T

    2011-04-01

    Bipartition of the medial cuneiform is a malsegmentation defect of the foot characterized by separation of the normal cuneiform into dorsal and plantar segments. In many cases, these segments are held together by means of a cartilaginous or fibrocartilaginous bridge, resulting in a deep, lytic-like pit in dry bone reminiscent of those seen in cases of non-osseous tarsal coalition. Partial bipartition, where separation of the two segments is incomplete, may also occur. Though originally documented over 250 years ago, relatively little is known about the bipartite medial cuneiform. The purpose of this paper is to present thirteen new cases (ten complete, three partial) from Egypt, England, South Africa, Denmark, and the United States, and to analyze all known cases to investigate patterns in sex, laterality, frequency, and associated anomalies. Results suggest that bipartite medial cuneiforms are significantly more prevalent in males. Bipartite medial cuneiforms are also frequently bilateral, perhaps indicating a strong genetic component. Identification of this condition in multiple individuals from a cemetery could, therefore, suggest a familial relationship. Frequencies of this variant are consistently less than 1% in most large samples, and significant frequency differences among samples from around the world are rare. Several other minor congenital variations have been noted in individuals with bipartition of the medial cuneiform. However, additional systematic research is needed to elucidate further the prevalence of associated variants.

  8. Global existence of solutions and uniform persistence of a diffusive predator-prey model with prey-taxis

    NASA Astrophysics Data System (ADS)

    Wu, Sainan; Shi, Junping; Wu, Boying

    2016-04-01

    This paper proves the global existence and boundedness of solutions to a general reaction-diffusion predator-prey system with prey-taxis defined on a smooth bounded domain with no-flux boundary condition. The result holds for domains in arbitrary spatial dimension and small prey-taxis sensitivity coefficient. This paper also proves the existence of a global attractor and the uniform persistence of the system under some additional conditions. Applications to models from ecology and chemotaxis are discussed.

  9. Kwazulu-Natal minibus taxi drivers' perceptions on HIV and AIDS: transmission, prevention, support and effects on the industry.

    PubMed

    McHunu, Gugu; Ncama, Busisiwe; Naidoo, Joanne Rachel; Majeke, Sisana; Myeza, Thandazile; Ndebele, Thandiwe; Pillay, Padmini

    2012-11-01

    In South Africa, the minibus taxi drivers are largely becoming another high-risk category in the HIV and AIDS epidemic. Although previous studies have shown that knowledge of HIV and AIDS is relatively high among the taxi drivers it is still not clear how this sub-population perceive the support rendered to them with regard to HIV and AIDS prevention strategies. This study aimed to focus on this atypical workplace and explore the KwaZulu-Natal, minibus taxi drivers' perceptions on HIV and AIDS. In this study, qualitative methods were utilized to determine the minibus taxi drivers' understanding of HIV and AIDS infection, HIV prevention strategies, existing support strategies and effects of HIV and AIDS on the taxi industry. Focus-group discussions were conducted, to collect data. The results showed that even though the taxi drivers had some understanding on HIV and AIDS there was still a dire need for interventions that were geared towards addressing HIV-related needs of the drivers in this industry.

  10. Video event data recording of a taxi driver used for diagnosis of epilepsy☆

    PubMed Central

    Sakurai, Kotaro; Yamamoto, Junko; Kurita, Tsugiko; Takeda, Youji; Kusumi, Ichiro

    2014-01-01

    A video event data recorder (VEDR) in a motor vehicle records images before and after a traffic accident. This report describes a taxi driver whose seizures were recorded by VEDR, which was extremely useful for the diagnosis of epilepsy. The patient was a 63-year-old right-handed Japanese male taxi driver. He collided with a streetlight. Two years prior to this incident, he raced an engine for a long time while parked. The VEDR enabled confirmation that the accidents depended on an epileptic seizure and he was diagnosed with symptomatic localization-related epilepsy. The VEDR is useful not only for traffic accident evidence; it might also contribute to a driver's health care and road safety. PMID:25667862

  11. Taxis of Artificial Swimmers in a Spatio-Temporally Modulated Activation Medium

    NASA Astrophysics Data System (ADS)

    Geiseler, Alexander; Hänggi, Peter; Marchesoni, Fabio

    2017-03-01

    Contrary to microbial taxis, where a tactic response to external stimuli is controlled by complex chemical pathways acting like sensor-actuator loops, taxis of artificial microswimmers is a purely stochastic effect associated with a non-uniform activation of the particles' self-propulsion. We study the tactic response of such swimmers in a spatio-temporally modulated activating medium by means of both numerical and analytical techniques. In the opposite limits of very fast and very slow rotational particle dynamics, we obtain analytic approximations that closely reproduce the numerical description. A swimmer drifts on average either parallel or anti-parallel to the propagation direction of the activating pulses, depending on their speed and width. The drift in line with the pulses is solely determined by the finite persistence length of the active Brownian motion performed by the swimmer, whereas the drift in the opposite direction results from the combination of ballistic and diffusive properties of the swimmer's dynamics.

  12. Artificial neural network model for identifying taxi gross emitter from remote sensing data of vehicle emission.

    PubMed

    Zeng, Jun; Guo, Hua-fang; Hu, Yue-ming

    2007-01-01

    Vehicle emission has been the major source of air pollution in urban areas in the past two decades. This article proposes an artificial neural network model for identifying the taxi gross emitters based on the remote sensing data. After carrying out the field test in Guangzhou and analyzing various factors from the emission data, the artificial neural network modeling was proved to be an advisable method of identifying the gross emitters. On the basis of the principal component analysis and the selection of algorithm and architecture, the Back-Propagation neural network model with 8-17-1 architecture was established as the optimal approach for this purpose. It gave a percentage of hits of 93%. Our previous research result and the result from aggression analysis were compared, and they provided respectively the percentage of hits of 81.63% and 75%. This comparison demonstrates the potentiality and validity of the proposed method in the identification of taxi gross emitters.

  13. Topological collective plasmons in bipartite chains of metallic nanoparticles

    NASA Astrophysics Data System (ADS)

    Downing, Charles A.; Weick, Guillaume

    2017-03-01

    We study a bipartite linear chain constituted by spherical metallic nanoparticles, where each nanoparticle supports a localized surface plasmon. The near-field dipolar interaction between the localized surface plasmons gives rise to collective plasmons, which are extended over the whole nanoparticle array. We derive analytically the spectrum and the eigenstates of the collective plasmonic excitations. At the edge of the Brillouin zone, the spectrum is of a pseudorelativistic nature similar to that present in the electronic band structure of polyacetylene. We find the effective Dirac Hamiltonian for the collective plasmons and show that the corresponding spinor eigenstates represent one-dimensional Dirac-like massive bosonic excitations. Therefore, the plasmonic lattice exhibits similar effects to those found for electrons in one-dimensional Dirac materials, such as the ability for transmission with highly suppressed backscattering due to Klein tunneling. We also show that the system is governed by a nontrivial Zak phase, which predicts the manifestation of edge states in the chain. When two dimerized chains with different topological phases are connected, we find the appearance of the bosonic version of a Jackiw-Rebbi midgap state. We further investigate the radiative and nonradiative lifetimes of the collective plasmonic excitations and comment on the challenges for experimental realization of the topological effects found theoretically.

  14. Identifying online user reputation of user-object bipartite networks

    NASA Astrophysics Data System (ADS)

    Liu, Xiao-Lu; Liu, Jian-Guo; Yang, Kai; Guo, Qiang; Han, Jing-Ti

    2017-02-01

    Identifying online user reputation based on the rating information of the user-object bipartite networks is important for understanding online user collective behaviors. Based on the Bayesian analysis, we present a parameter-free algorithm for ranking online user reputation, where the user reputation is calculated based on the probability that their ratings are consistent with the main part of all user opinions. The experimental results show that the AUC values of the presented algorithm could reach 0.8929 and 0.8483 for the MovieLens and Netflix data sets, respectively, which is better than the results generated by the CR and IARR methods. Furthermore, the experimental results for different user groups indicate that the presented algorithm outperforms the iterative ranking methods in both ranking accuracy and computation complexity. Moreover, the results for the synthetic networks show that the computation complexity of the presented algorithm is a linear function of the network size, which suggests that the presented algorithm is very effective and efficient for the large scale dynamic online systems.

  15. Conflicting attachment and the growth of bipartite networks

    NASA Astrophysics Data System (ADS)

    Leung, Chung Yin Joey; Weitz, Joshua S.

    2016-03-01

    Simple growth mechanisms have been proposed to explain the emergence of seemingly universal network structures. The widely studied model of preferential attachment assumes that new nodes are more likely to connect to highly connected nodes. Preferential attachment explains the emergence of scale-free degree distributions within complex networks. Yet it is incompatible with many network systems, particularly bipartite systems in which two distinct types of agents interact. For example, the addition of new links in a host-parasite system corresponds to the infection of hosts by parasites. Increasing connectivity is beneficial to a parasite and detrimental to a host. Therefore, the overall network connectivity is subject to conflicting pressures. Here we propose a stochastic network growth model of conflicting attachment, inspired by a particular kind of parasite-host interaction: that of viruses interacting with microbial hosts. The mechanism of network growth includes conflicting preferences to network density as well as costs involved in modifying the network connectivity according to these preferences. We find that the resulting networks exhibit realistic patterns commonly observed in empirical data, including the emergence of nestedness, modularity, and nested-modular structures that exhibit both properties. We study the role of conflicting interests in shaping network structure and assess opportunities to incorporate greater realism in linking growth process to pattern in systems governed by antagonistic and mutualistic interactions.

  16. Bipartite clavicular attachment of the sternocleidomastoid muscle: a case report.

    PubMed

    Mehta, Vandana; Arora, Jyoti; Kumar, Ashwani; Nayar, Ashish Kumar; Ioh, Hitendra Kumar; Gupta, Vanita; Suri, Rajesh Kuamr; Rath, Gayatri

    2012-03-01

    Morphological variations of the sternocleidomastoid (SCM) muscle assume relevance during attempted surgical interventions in the cervical region. The present study reports bipartite clavicular attachment of the SCM in the neck of an adult male cadaver during performance of a routine anatomy demonstration. The anomaly was unilaterally observed on the left side of the neck. The clavicular head of the muscle exhibited two bellies, one medial and one lateral. While the medial belly was fused with the sternal head, the lateral belly appeared to blend with the medial. Cranially, the SCM attached to the mastoid process and superior nuchal line. We have attempted to elucidate the embryological basis of the above muscular variant. Additionally, we discuss its clinical relevance, highlighting the utility of the SCM in various reconstructive procedures. We assert that detailed anatomical knowledge of such SCM variants is of utility not only to the gross anatomist, but also for neck and orthopaedic surgeons and anaesthetists. Moreover, radiologists require familiarity with such aberrations to decipher magnetic resonance imaging scans of the cervical region.

  17. Conditional mutual information of bipartite unitaries and scrambling

    NASA Astrophysics Data System (ADS)

    Ding, Dawei; Hayden, Patrick; Walter, Michael

    2016-12-01

    One way to diagnose chaos in bipartite unitary channels is via the tripartite information of the corresponding Choi state, which for certain choices of the subsystems reduces to the negative conditional mutual information (CMI). We study this quantity from a quantum information-theoretic perspective to clarify its role in diagnosing scrambling. When the CMI is zero, we find that the channel has a special normal form consisting of local channels between individual inputs and outputs. However, we find that arbitrarily low CMI does not imply arbitrary proximity to a channel of this form, although it does imply a type of approximate recoverability of one of the inputs. When the CMI is maximal, we find that the residual channel from an individual input to an individual output is completely depolarizing when the other input is maximally mixed. However, we again find that this result is not robust. We also extend some of these results to the multipartite case and to the case of Haar-random pure input states. Finally, we look at the relationship between tripartite information and its Rényi-2 version which is directly related to out-of-time-order correlation functions. In particular, we demonstrate an arbitrarily large gap between the two quantities.

  18. Bipartite Graphs for Visualization Analysis of Microbiome Data

    PubMed Central

    Sedlar, Karel; Videnska, Petra; Skutkova, Helena; Rychlik, Ivan; Provaznik, Ivo

    2016-01-01

    Visualization analysis plays an important role in metagenomics research. Proper and clear visualization can help researchers get their first insights into data and by selecting different features, also revealing and highlighting hidden relationships and drawing conclusions. To prevent the resulting presentations from becoming chaotic, visualization techniques have to properly tackle the high dimensionality of microbiome data. Although a number of different methods based on dimensionality reduction, correlations, Venn diagrams, and network representations have already been published, there is still room for further improvement, especially in the techniques that allow visual comparison of several environments or developmental stages in one environment. In this article, we represent microbiome data by bipartite graphs, where one partition stands for taxa and the other stands for samples. We demonstrated that community detection is independent of taxonomical level. Moreover, focusing on higher taxonomical levels and the appropriate merging of samples greatly helps improving graph organization and makes our presentations clearer than other graph and network visualizations. Capturing labels in the vertices also brings the possibility of clearly comparing two or more microbial communities by showing their common and unique parts. PMID:27279729

  19. Acceptability testing of radioluminescent lights for VFR-night air taxi operations

    SciTech Connect

    Jensen, G.A.

    1985-01-01

    Tritium-powered radioluminescent (RL) lights have been under development for remote, austere, and tactical airfield lighting applications. The State of Alaska has requested FAA approval for use of the technology as a safe alternative lighting system to meet the airfield lighting needs of air taxi operations and general aviation in the state. The tests described in this report were performed by PNL for the DOE Defense Byproducts Production and Utilization Program. These tests are a step toward gaining the required approvals.

  20. Supporting South Asian Taxi Drivers to Exercise through Pedometers (SSTEP) to decrease cardiovascular disease risk.

    PubMed

    Gany, Francesca; Gill, Pavan; Baser, Raymond; Leng, Jennifer

    2014-06-01

    There is considerable evidence demonstrating the positive impact of pedometers and walking programs for increasing physical activity and reducing risk for cardiovascular disease among diverse populations. However, no interventions have been targeted towards South Asian taxi drivers, a population that may be at high risk for developing cardiovascular disease. Supporting South Asian Taxi Drivers to Exercise through Pedometers (SSTEP) was a 12-week pilot study among South Asian taxi drivers to increase their daily step counts. SSTEP assessed the feasibility, acceptability, and potential impact of an exercise intervention employing pedometers, a step diary, written materials, and telephone follow-up to initiate or increase physical activity in this at-risk occupational group. Seventy-four drivers were recruited to participate at sites frequented by South Asian taxi drivers. Participant inclusion criteria were: (1) age 18 or over; (2) birthplace in India, Pakistan, or Bangladesh; (3) fluent in English, Hindi, Urdu, Punjabi, or Bengali; and (4) intention to remain in New York City for the 3-month study period. Comprehensive intake and exit questionnaires were administered to participants in their preferred languages. Intake and exit health screenings, including blood pressure, cholesterol, and glucose were completed. Daily step counts were obtained 4 days after recruitment, and at the 4-, 8-, and 12-week mark via phone calls. To measure the impact of the intervention, step counts, blood pressure, cholesterol, and body mass index were compared at intake and exit. Participants in SSTEP were sedentary at baseline. The SSTEP intervention resulted in a small increase in step counts among participants overall, and in a significant increase (>2,000 steps) among a subset ("Bigsteppers"). Drivers with higher baseline glucose values had significantly greater improvements in their step counts. Focused lifestyle interventions for drivers at high risk for cardiovascular disease may

  1. Estimate of air carrier and air taxi crash frequencies from high altitude en route flight operations

    SciTech Connect

    Sanzo, D.; Kimura, C.Y.; Prassinos, P.G.

    1996-06-03

    In estimating the frequency of an aircraft crashing into a facility, it has been found convenient to break the problem down into two broad categories. One category estimates the aircraft crash frequency due to air traffic from nearby airports, the so-called near-airport environment. The other category estimates the aircraft crash frequency onto facilities due to air traffic from airways, jet routes, and other traffic flying outside the near-airport environment The total aircraft crash frequency is the summation of the crash frequencies from each airport near the facility under evaluation and from all airways, jet routes, and other traffic near the facility of interest. This paper will examine the problems associated with the determining the aircraft crash frequencies onto facilities outside the near-airport environment. This paper will further concentrate on the estimating the risk of aircraft crashes to ground facilities due to high altitude air carrier and air taxi traffic. High altitude air carrier and air taxi traffic will be defined as all air carrier and air taxi flights above 18,000 feet Mean Sea Level (MSL).

  2. Step On It! - Workplace cardiovascular risk assessment of New York City yellow taxi drivers

    PubMed Central

    Gany, Francesca; Bari, Sehrish; Gill, Pavan; Ramirez, Julia; Ayash, Claudia; Loeb, Rebecca; Aragones, Abraham; Leng, Jennifer

    2015-01-01

    Background Multiple factors associated with taxi driving can increase the risk of cardiovascular disease (CVD) in taxi drivers. Methods This paper describes the results of Step On It!, which assessed CVD risk factors among New York City taxi drivers at John F. Kennedy International Airport. Drivers completed an intake questionnaire and free screenings for blood pressure, glucose and body mass index (BMI). Results 466 drivers participated. 9% had random plasma glucose values >200 mg/dl. 77% had elevated BMIs. Immigrants who lived in the U.S. for >10 years had 2.5 times the odds (CI: 1.1–5.9) of having high blood pressure compared to newer immigrants. Discussion Abnormalities documented in this study were significant, especially for immigrants with greater duration of residence in the U.S., and underscore the potential for elevated CVD risk in this vulnerable population, and the need to address this risk through frameworks that utilize multiple levels of intervention. PMID:25680879

  3. Generation of Bi-partite Polarization Correlation using Coherent States for Quantum Communication

    NASA Astrophysics Data System (ADS)

    Bollen, Viktor; Meng Sua, Yong; Fook Lee, Kim

    2010-03-01

    We present a novel scheme to generate bi-partite polarization correlation using coherent states for quantum communication. The scheme can be used for entanglement based quantum cryptography, where the bi-partite correlation will be protected by quantum noise. We perform experimental measurement on two independent coherent states with low mean photon numbers. A coherent state with polarization H is mixed with another coherent state with polarization V through a beam splitter. Polarization correlation is manipulated by using a quarter wave plate and a linear polarizer at each output of the beam splitter. The product signal obtained from the output modes contains bi-partite correlation and other noise terms. We obtain the bi-partite correlation function by employing mean-value measurement based on Stapp's formulation on the product signal, where the noise term is then averaged to zero due to randomness of quantum phase noise. The bi-partite correlation obtained by using two coherent states is quantum correlation because coherent states with low mean photon numbers are involved and the correlations are protected by randomness of quantum noise as inherited by mean photon number fluctuation and its associated phase fluctuation. Preparations for four types of coherent-state polarization correlation functions are also outlined.

  4. Sudden Transition between Classical to Quantum Decoherence in bipartite correlated Qutrit Systems

    PubMed Central

    Cárdenas-López, F. A.; Allende, S.; Retamal, J. C.

    2017-01-01

    Classical to quantum decoherence transition, an issue existing for incoherent superposition of Bell-diagonal states is studied for three dimensional bipartite AB mixed quantum systems. Depending on the initial conditions, the dynamics of classical and quantum correlations can exhibit a sudden transition between classical to quantum decoherence. This result is calculated numerically by using entropic and geometric measures of correlations. An alternative explanation for this effect could be obtained by extending the bipartite A ⊗ B qutrit system to a pure tripartite A ⊗ B ⊗ C system. The freezing of classical correlations in AB is related to a freezing of the entanglement in the AC bipartition. PMID:28317916

  5. Fast extraction of the backbone of projected bipartite networks to aid community detection

    NASA Astrophysics Data System (ADS)

    Liebig, J.; Rao, A.

    2016-01-01

    This paper introduces a computationally inexpensive method for extracting the backbone of one-mode networks projected from bipartite networks. We show that the edge weights in the one-mode projections are distributed according to a Poisson binomial distribution and that finding the expected weight distribution of a one-mode network projected from a random bipartite network only requires knowledge of the bipartite degree distributions. Being able to extract the backbone of a projection is highly beneficial in filtering out redundant information in large complex networks and narrowing down the information in the one-mode projection to the most relevant. We demonstrate that the backbone of a one-mode projection aids in the detection of communities.

  6. Complete genome sequence of a new bipartite begomovirus infecting fluted pumpkin (Telfairia occidentalis) plants in Cameroon.

    PubMed

    Leke, Walter N; Khatabi, Behnam; Fondong, Vincent N; Brown, Judith K

    2016-08-01

    The complete genome sequence was determined and characterized for a previously unreported bipartite begomovirus from fluted pumpkin (Telfairia occidentalis, family Cucurbitaceae) plants displaying mosaic symptoms in Cameroon. The DNA-A and DNA-B components were ~2.7 kb and ~2.6 kb in size, and the arrangement of viral coding regions on the genomic components was like those characteristic of other known bipartite begomoviruses originating in the Old World. While the DNA-A component was more closely related to that of chayote yellow mosaic virus (ChaYMV), at 78 %, the DNA-B component was more closely related to that of soybean chlorotic blotch virus (SbCBV), at 64 %. This newly discovered bipartite Old World virus is herein named telfairia mosaic virus (TelMV).

  7. A novel bipartite nuclear localization signal with an atypically long linker in DOF transcription factors.

    PubMed

    Krebs, Jonas; Mueller-Roeber, Bernd; Ruzicic, Slobodan

    2010-05-01

    Large molecules require a nuclear localization signal (NLS) for translocation into the nucleus. Classical NLSs are rich in basic amino acids and they represent three groups, based on their structural features: SV40 T-antigen-type, yeast mating factor Matalpha-2-type, and bipartite NLSs. DNA-binding-with-one-finger (DOF) transcription factors play important roles in plants, and although their nuclear localization has been demonstrated in several cases, public protein localization prediction tools fail to detect NLS motifs in these proteins. Here, we demonstrate that an atypical bipartite NLS with a 17 amino acid long linker between its flanking basic regions directs Arabidopsis thaliana DOF proteins to the cell nucleus. The novel bipartite NLS is highly conserved in plant DOF transcription factors, including the single DOF protein in the green alga Chlamydomonas reinhardtii.

  8. Effect of the social influence on topological properties of user-object bipartite networks

    NASA Astrophysics Data System (ADS)

    Liu, Jian-Guo; Hu, Zhaolong; Guo, Qiang

    2013-11-01

    Social influence plays an important role in analyzing online users' collective behaviors [Salganik et al., Science 311, 854 (2006)]. However, the effect of the social influence from the viewpoint of theoretical model is missing. In this paper, by taking into account the social influence and users' preferences, we develop a theoretical model to analyze the topological properties of user-object bipartite networks, including the degree distribution, average nearest neighbor degree and the bipartite clustering coefficient, as well as topological properties of the original user-object networks and their unipartite projections. According to the users' preferences and the global ranking effect, we analyze the theoretical results for two benchmark data sets, Amazon and Bookcrossing, which are approximately consistent with the empirical results. This work suggests that this model is feasible to analyze topological properties of bipartite networks in terms of the social influence and the users' preferences.

  9. A New Parallel Algorithm Analogous to Elastic Net Method forBipartite Subgraph Problem

    NASA Astrophysics Data System (ADS)

    Tang, Zheng; Wang, Rong Long; Wang, Jia Hai; Cao, Qi Ping

    The goal of the bipartite subgraph problem, which is an NP-complete problem, is to remove the minimum number of edges in a given graph such that the remaining graph is a bipartite graph. Enlightened by the elastic net method that was introduced by Durbin and Willshaw for finding shortest route for the Traveling Salesman Problem (TSP), we proposed a new parallel algorithm for the bipartite subgraph problem. The approach jointly tends to satisfy the constraint condition and minimizes the number of removed edges. The collective computational properties of the proposed approach are also proved theoretically. A large number of instances have been simulated to verify the proposed algorithm. The simulation results show that our algorithm finds a solution superior to that of the best existing parallel algorithms.

  10. Identifying common components across biological network graphs using a bipartite data model.

    PubMed

    Baker, Ej; Culpepper, C; Philips, C; Bubier, J; Langston, M; Chesler, Ej

    2014-01-01

    The GeneWeaver bipartite data model provides an efficient means to evaluate shared molecular components from sets derived across diverse species, disease states and biological processes. In order to adapt this model for examining related molecular components and biological networks, such as pathway or gene network data, we have developed a means to leverage the bipartite data structure to extract and analyze shared edges. Using the Pathway Commons database we demonstrate the ability to rapidly identify shared connected components among a diverse set of pathways. In addition, we illustrate how results from maximal bipartite discovery can be decomposed into hierarchical relationships, allowing shared pathway components to be mapped through various parent-child relationships to help visualization and discovery of emergent kernel driven relationships. Interrogating common relationships among biological networks and conventional GeneWeaver gene lists will increase functional specificity and reliability of the shared biological components. This approach enables self-organization of biological processes through shared biological networks.

  11. BIPARTITE PATELLA IN 35-YEAR-OLD FITNESS INSTRUCTOR: A CASE REPORT

    PubMed Central

    Zabierek, Jakub; Kwapisz, Adam; Domzalski, Marcin E

    2016-01-01

    Background and Purpose The patella plays an important role in knee biomechanics and provides anterior coverage of the knee joint. One to two percent of the population has an anatomical variant of patella called a bipartite patella that usually does not case pain. However, occasionally after injury or overuse during sport it can be a source of anterior knee pain. The purpose of this case report was to present a rare variant of bipartite patella and highlight conservative treatment of this condition. Study Design Case Report Case Description A 35-year-old female patient presented with persistent bilateral non-traumatic anterior knee pain of a six-year duration that was enhanced by strenuous kinds of sport activity. Standard radiographs and MRI revealed the presence of bipartite patella with medial pole cartilage edema bilaterally. Conservative care including physical therapy, extracorporeal shock wave therapy (ESWT), and viscosupplementation was utilized. Outcome After treatment VAS decreased to 0/10 from 5/10 in the left knee and 1/10 from 5/10 in the right knee. The Kujala Scores improved after treatment to 100 and 95 for the left and right knees respectively. The subject returned to full sport activity and work as a fitness instructor without pain and limitations. Discussion This case describes a rare finding of bilateral medial bipartite patella and the successful use of physical therapy with viscosupplementation in patellar pain caused by bipartite patella. It also supports the use of Extra Corporeal Shock Wave Therapy in bipartite patella pain as a supplement for therapy. Level of Evidence 4 PMID:27757290

  12. Identification of a bipartite nuclear localization signal in the silkworm Masc protein.

    PubMed

    Sugano, Yudai; Kokusho, Ryuhei; Ueda, Masamichi; Fujimoto, Masaru; Tsutsumi, Nobuhiro; Shimada, Toru; Kiuchi, Takashi; Katsuma, Susumu

    2016-07-01

    The silkworm Masculinizer (Masc) gene encodes a CCCH-tandem zinc finger protein that controls both masculinization and dosage compensation. Masc protein is a nuclear protein, but the mechanism underlying the transport of this protein into the nucleus has not yet been elucidated. Here, we identified a functional bipartite nuclear localization signal (NLS) located between residues 274 and 290 of the Masc protein. Sequence comparison revealed that this bipartite NLS is evolutionarily conserved in Masc proteins from other lepidopteran insects. Furthermore, we showed that the degree of nuclear localization is not associated with the masculinizing activity of the Masc protein.

  13. Efficient implementation of bipartite nonlocal unitary gates using prior entanglement and classical communication

    SciTech Connect

    Yu Li; Griffiths, Robert B.; Cohen, Scott M.

    2010-06-15

    Any bipartite nonlocal unitary operation can be carried out by teleporting a quantum state from one party to the other, performing the unitary gate locally, and teleporting a state back again. This paper investigates unitaries which can be carried out using less prior entanglement and classical communication than are needed for teleportation. Large families of such unitaries are constructed using (projective) representations of finite groups. Among the tools employed are: a diagrammatic approach for representing entangled states, a theorem on the necessary absence of information at certain times and locations, and a representation of bipartite unitaries based on a group Fourier transform.

  14. Bipartite quantum channels using multipartite cluster-type entangled coherent states

    SciTech Connect

    Munhoz, P. P.; Semiao, F. L.; Roversi, J. A.; Vidiella-Barranco, A.

    2010-04-15

    We propose a particular encoding for bipartite entangled states derived from multipartite cluster-type entangled coherent states (CTECSs). We investigate the effects of amplitude damping on the entanglement content of this bipartite state, as well as its usefulness as a quantum channel for teleportation. We find interesting relationships among the amplitude of the coherent states constituting the CTECSs, the number of subsystems forming the logical qubits (redundancy), and the extent to which amplitude damping affects the entanglement of the channel. For instance, in the sense of sudden death of entanglement, given a fixed value of the initial coherent state amplitude, the entanglement life span is shortened if redundancy is increased.

  15. Economic and Deterministic Quantum Teleportation of Arbitrary Bipartite Pure and Mixed State with Shared Cluster Entanglement

    NASA Astrophysics Data System (ADS)

    Zhang, Binbin; Liu, Yu

    2009-09-01

    We present a novel protocol for teleportation of arbitrary bipartite pure and mixed state with shared cluster entanglement in this paper. By employing Bell-state measurement on the teleported state and the shared cluster state twice, a sender could transmit the arbitrary bipartite state to a distant receiver. We show the good feature of the cluster state channel, with which it can realize the deterministic teleportation rather than probabilistic one. Moreover, since we require less particles to be shared and need no auxiliary qubit in our protocol, it is more efficient and applicable than the previous schemes.

  16. Coupling-induced bipartite pointer states in arrays of electron billiards: quantum Darwinism in action?

    PubMed

    Brunner, R; Akis, R; Ferry, D K; Kuchar, F; Meisels, R

    2008-07-11

    We discuss a quantum system coupled to the environment, composed of an open array of billiards (dots) in series. Beside pointer states occurring in individual dots, we observe sets of robust states which arise only in the array. We define these new states as bipartite pointer states, since they cannot be described in terms of simple linear combinations of robust single-dot states. The classical existence of bipartite pointer states is confirmed by comparing the quantum-mechanical and classical results. The ability of the robust states to create "offspring" indicates that quantum Darwinism is in action.

  17. Coupling-Induced Bipartite Pointer States in Arrays of Electron Billiards: Quantum Darwinism in Action?

    NASA Astrophysics Data System (ADS)

    Brunner, R.; Akis, R.; Ferry, D. K.; Kuchar, F.; Meisels, R.

    2008-07-01

    We discuss a quantum system coupled to the environment, composed of an open array of billiards (dots) in series. Beside pointer states occurring in individual dots, we observe sets of robust states which arise only in the array. We define these new states as bipartite pointer states, since they cannot be described in terms of simple linear combinations of robust single-dot states. The classical existence of bipartite pointer states is confirmed by comparing the quantum-mechanical and classical results. The ability of the robust states to create “offspring” indicates that quantum Darwinism is in action.

  18. 41 CFR 301-10.421 - How much will my agency reimburse me for a tip to a taxi, shuttle service, courtesy...

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 41 Public Contracts and Property Management 4 2012-07-01 2012-07-01 false How much will my agency reimburse me for a tip to a taxi, shuttle service, courtesy transportation driver, or valet parking... will my agency reimburse me for a tip to a taxi, shuttle service, courtesy transportation driver,...

  19. 41 CFR 301-10.421 - How much will my agency reimburse me for a tip to a taxi, shuttle service, courtesy...

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 41 Public Contracts and Property Management 4 2014-07-01 2014-07-01 false How much will my agency reimburse me for a tip to a taxi, shuttle service, courtesy transportation driver, or valet parking... will my agency reimburse me for a tip to a taxi, shuttle service, courtesy transportation driver,...

  20. 41 CFR 301-10.421 - How much will my agency reimburse me for a tip to a taxi, shuttle service, courtesy...

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 41 Public Contracts and Property Management 4 2013-07-01 2012-07-01 true How much will my agency reimburse me for a tip to a taxi, shuttle service, courtesy transportation driver, or valet parking... will my agency reimburse me for a tip to a taxi, shuttle service, courtesy transportation driver,...

  1. 41 CFR 301-10.421 - How much will my agency reimburse me for a tip to a taxi, shuttle service, or courtesy...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 41 Public Contracts and Property Management 4 2011-07-01 2011-07-01 false How much will my agency reimburse me for a tip to a taxi, shuttle service, or courtesy transportation driver? 301-10.421 Section 301... tip to a taxi, shuttle service, or courtesy transportation driver? An amount which your...

  2. 41 CFR 301-10.421 - How much will my agency reimburse me for a tip to a taxi, shuttle service, or courtesy...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 41 Public Contracts and Property Management 4 2010-07-01 2010-07-01 false How much will my agency reimburse me for a tip to a taxi, shuttle service, or courtesy transportation driver? 301-10.421 Section 301... tip to a taxi, shuttle service, or courtesy transportation driver? An amount which your...

  3. Personal exposures to airborne metals in London taxi drivers and office workers in 1995 and 1996.

    PubMed

    Pfeifer, G D; Harrison, R M; Lynam, D R

    1999-09-01

    In 1995, a petroleum marketer introduced a diesel fuel additive in the UK containing Mn as MMT (methylcyclopentadienyl manganese tricarbonyl). A small study of personal exposures to airborne Mn in London was conducted before and after introduction of the additive to identify any major impact of the additive on exposures. In 1995, personal exposures to Mn were measured in two groups, taxi drivers and office workers (10 subjects per group) for two consecutive 7-day periods. A similar study was carried out in 1996 to determine if exposures had changed. Samples were also analyzed for Ca, Al, Mg and Pb. In 1996, exposures to aerosol mass as total suspended particulates (TSP) and PM2.5 were measured in addition to the metals. Manganese exposures in this cohort did not increase as a result of introduction of the additive. However, a significant source of Mn exposure was discovered during the conduct of these tests. The mean exposure to Mn was higher among the office workers in both years than that of the taxi drivers. This was due to the fact that approximately half of the office workers commuted via the underground railway system where airborne dust and metal concentrations are significantly elevated over those in the general environment. Similar results have been noted in other cities having underground rail systems. Exposure to Mn, Pb, Ca, and Mg were not significantly different between the 2 years. Taxi drivers had higher exposures than office workers to Mg and Pb in both years. Commuting via the underground also had a significant impact on exposures to TSP, PM2.5, Al, and Ca, but had little effect on exposures to Mg. The aerosol in the underground was particularly enriched in Mn, approximately 10-fold, when compared to the aerosol in the general environment. There are several possible sources for this Mn, including mechanical wear of the steel wheels on the steel rais, vaporization of metal from sparking of the third rail, or brake wear.

  4. Exposure of Paris taxi drivers to automobile air pollutants within their vehicles

    PubMed Central

    Zagury, E.; Le Moullec, Y.; Momas, I.

    2000-01-01

    OBJECTIVES—To study the exposure of Parisian taxi drivers to automobile air pollutants during their professional activity.
METHODS—A cross sectional study was carried out from 27 January to 27 March 1997, with measurements performed in the vehicles of 29 randomly selected drivers. Carbon monoxide (CO) content was measured over an 8 hour period by a CO portable monitor. The fine suspended particles were measured according to the black smoke index (BS), with a flow controlled portable pump provided with a cellulose filter. The nitrogen oxides, NO and NO2 were measured with a passive sampler.
RESULTS—These drivers are exposed during their professional activity to relatively high concentrations of pollutants (mean, median (SD) 3.8, 2 (1.7) ppm for CO, 168, 164 (53) µg/m3 for BS, 625, 598 (224) µg/m3 for NO, and 139, 131 (43) µg/m3 for NO2.) For CO the concentrations were clearly lower than the threshold values recommended by the World Health Organisation. The situation is less satisfactory for the other pollutants, especially for the BS index. All concentrations of pollutants recorded were noticeably higher than concentrations in air recorded by the ambient Parisian air monitoring network and were close to, or slightly exceeded, the concentrations measured at the fixed stations close to automobile traffic. Pollutant concentrations were also influenced greatly by weather conditions.
CONCLUSION—This first French study conducted in taxi drivers shows that they are highly exposed to automobile pollutants. The results would justify a medical follow up of this occupational group.


Keywords: taxi drivers; exposure assessment PMID:10810130

  5. A lightweight neighbor-info-based routing protocol for no-base-station taxi-call system.

    PubMed

    Zhu, Xudong; Wang, Jinhang; Chen, Yunchao

    2014-01-01

    Since the quick topology change and short connection duration, the VANET has had unstable routing and wireless signal quality. This paper proposes a kind of lightweight routing protocol-LNIB for call system without base station, which is applicable to the urban taxis. LNIB maintains and predicts neighbor information dynamically, thus finding the reliable path between the source and the target. This paper describes the protocol in detail and evaluates the performance of this protocol by simulating under different nodes density and speed. The result of evaluation shows that the performance of LNIB is better than AODV which is a classic protocol in taxi-call scene.

  6. A Lightweight Neighbor-Info-Based Routing Protocol for No-Base-Station Taxi-Call System

    PubMed Central

    Zhu, Xudong; Wang, Jinhang; Chen, Yunchao

    2014-01-01

    Since the quick topology change and short connection duration, the VANET has had unstable routing and wireless signal quality. This paper proposes a kind of lightweight routing protocol-LNIB for call system without base station, which is applicable to the urban taxis. LNIB maintains and predicts neighbor information dynamically, thus finding the reliable path between the source and the target. This paper describes the protocol in detail and evaluates the performance of this protocol by simulating under different nodes density and speed. The result of evaluation shows that the performance of LNIB is better than AODV which is a classic protocol in taxi-call scene. PMID:24737984

  7. Modeling one-mode projection of bipartite networks by tagging vertex information

    NASA Astrophysics Data System (ADS)

    Qiao, Jian; Meng, Ying-Ying; Chen, Hsinchun; Huang, Hong-Qiao; Li, Guo-Ying

    2016-09-01

    Traditional one-mode projection models are less informative than their original bipartite networks. Hence, using such models cannot control the projection's structure freely. We proposed a new method for modeling the one-mode projection of bipartite networks, which thoroughly breaks through the limitations of the available one-mode projecting methods by tagging the vertex information of bipartite networks in their one-mode projections. We designed a one-mode collaboration network model by using the method presented in this paper. The simulation results show that our model matches three real networks very well and outperforms the available collaboration network models significantly, which reflects the idea that our method is ideal for modeling one-mode projection models of bipartite graphs and that our one-mode collaboration network model captures the crucial mechanisms of the three real systems. Our study reveals that size growth, individual aging, random collaboration, preferential collaboration, transitivity collaboration and multi-round collaboration are the crucial mechanisms of collaboration networks, and the lack of some of the crucial mechanisms is the main reason that the other available models do not perform as well as ours.

  8. Complementarity between tripartite quantum correlation and bipartite Bell-inequality violation in three-qubit states

    NASA Astrophysics Data System (ADS)

    Pandya, Palash; Misra, Avijit; Chakrabarty, Indranil

    2016-11-01

    We find a single parameter family of genuinely entangled three-qubit pure states, called the maximally Bell-inequality violating states (MBV), which exhibit maximum Bell-inequality violation by the reduced bipartite system for a fixed amount of genuine tripartite entanglement quantified by the so-called tangle measure. This in turn implies that there holds a complementary relation between the Bell-inequality violation by the reduced bipartite systems and the tangle present in the three-qubit states, not necessarily pure. The MBV states also exhibit maximum Bell-inequality violation by the reduced bipartite systems of the three-qubit pure states with a fixed amount of genuine tripartite correlation quantified by the generalized geometric measure, a genuine entanglement measure of multiparty pure states, and the discord monogamy score, a multipartite quantum correlation measure from information-theoretic paradigm. The aforementioned complementary relation has also been established for three-qubit pure states for the generalized geometric measure and the discord monogamy score, respectively. The complementarity between the Bell-inequality violation by the reduced bipartite systems and the genuine tripartite correlation suggests that the Bell-inequality violation in the reduced two-qubit system comes at the cost of the total tripartite correlation present in the entire system.

  9. Construction of three-qubit genuine entanglement with bipartite positive partial transposes

    NASA Astrophysics Data System (ADS)

    Ha, Kil-Chan; Kye, Seung-Hyeok

    2016-03-01

    We construct triqubit genuinely entangled states which have positive partial transposes (PPTs) with respect to the bipartition of systems. These examples disprove a conjecture [Novo, Moroder, and Gühne, Phys. Rev A 88, 012305 (2013), 10.1103/PhysRevA.88.012305] which claims that PPT mixtures are necessary and sufficient for the biseparability of three qubits.

  10. Human Mars Mission: SEP Architecture, Crew Taxi Propulsion Stage Study and Design and Technology for Reaction and Control System. Pt. 1

    NASA Technical Reports Server (NTRS)

    Young, Archie

    1999-01-01

    The Mars exploration is a candidate pathway to expand human presence and useful activities in the solar system. There are several propulsion system options being considered to place the Mars payload on its interplanetary transfer trajectory. One propulsion option is the use of Solar Electric Propulsion (SEP) to spiral out with the Mars payload from an initial Low Earth Orbit (LEO) to an elliptical High Earth Orbit (HEO). This report, presented in annotated facing page format, describes the work completed on the design of a crew taxi propulsion stage used in conjunction with the SEP. Transportation system/mission analysis topics covered in this report include sub-system analysis, trajectory profile description, mass performance and crew taxi stage sizing, stage configuration, stage cost, and Trans-Mars Injection (TMI) launch window. The high efficiency of SEP is used to provide the major part of the TMI propulsion maneuver. Orbital energy is continuously added over a period of approximately twelve months. The SEP and Mars payload follow a spiral trajectory from an initial LEO to a final elliptical HEO. A small chemical stage is then used to provide the final part of the TMI. The now unloaded SEP returns to LEO to repeat another spiral trajectory with payload to HEO. The spiral phase of the SEP's trajectory takes several months to reach HEO, thus significantly increasing the exposure time of the crew to zero-gravity. In order to minimize the long zero-gravity effects, a high thrust chemical stage delivers the crew to the SEP's HEO. The crew rendezvous with the Mars payload in HEO. After a checkout period the Mars payload with the crew is injected onto a Trans-Mars Trajectory by a small chemical stage.

  11. Human Mars Mission: SEP Architecture Crew Taxi Propulsion Stage Study and Design and Technology for Reaction and Control System. Part 1

    NASA Technical Reports Server (NTRS)

    Young, Archie

    1999-01-01

    The Mars exploration is a candidate pathway to expand human presence and useful activities in the solar system. There are several propulsion system options being considered to place the Mars payload on its inter-planetary transfer trajectory. One propulsion option is the use of Solar Electric Propulsion (SEP) to spiral out with the Mars payload from an initial Low Earth Orbit (LEO) to an elliptical High Earth Orbit (HEO). This report, presented in annotated facing page format, describes the work completed on the design of a crew taxi propulsion stage used in conjunction with the SEP. Transportation system/mission analysis topics covered in this report include sub-system analysis, trajectory profile description, mass performance and crew taxi stage sizing, stage configuration, stage cost, and Trans-Mars Injection (TMI) launch window. The high efficiency of SEP is used to provide the major part of the TMI propulsion maneuver. Orbital energy is continuously added over a period of approximately twelve months. The SEP and Mars payload follow a spiral trajectory from an initial LEO to a final elliptical HEO. A small chemical stage is then used to provide the final part of the TMI. The now unloaded SEP returns to LEO to repeat another spiral trajectory with payload to HEO. The spiral phase of the SEP's trajectory takes several months to reach HEO, thus significantly increasing the exposure time of the crew to zero-gravity. In order to minimize the long zero-gravity effects, a high thrust chemical stage delivers the crew to the SEP's HEO. The crew rendezvous with the Mars payload in HEO. After a checkout period the Mars payload with the crew is injected onto a Trans-Mars Trajectory by a small chemical stage.

  12. Oxygen taxis and proton motive force in Azospirillum brasilense.

    PubMed

    Zhulin, I B; Bespalov, V A; Johnson, M S; Taylor, B L

    1996-09-01

    The microaerophilic nitrogen-fixing bacterium Azospirillum brasilense formed a sharply defined band in a spatial gradient of oxygen. As a result of aerotaxis, the bacteria were attracted to a specific low concentration of oxygen (3 to 5 microM). Bacteria swimming away from the aerotactic band were repelled by the higher or lower concentration of oxygen that they encountered and returned to the band. This behavior was confirmed by using temporal gradients of oxygen. The cellular energy level in A. brasilense, monitored by measuring the proton motive force, was maximal at 3 to 5 microM oxygen. The proton motive force was lower at oxygen concentrations that were higher or lower than the preferred oxygen concentration. Bacteria swimming toward the aerotactic band would experience an increase in the proton motive force, and bacteria swimming away from the band would experience a decrease in the proton motive force. It is proposed that the change in the proton motive force is the signal that regulates positive and negative aerotaxis. The preferred oxygen concentration for aerotaxis was similar to the preferred oxygen concentration for nitrogen fixation. Aerotaxis is an important adaptive behavioral response that can guide these free-living diazotrophs to the optimal niche for nitrogen fixation in the rhizosphere.

  13. Perception and reality of particulate matter exposure in New York City taxi drivers.

    PubMed

    Gany, Francesca; Bari, Sehrish; Prasad, Lakshmi; Leng, Jennifer; Lee, Trevor; Thurston, George D; Gordon, Terry; Acharya, Sudha; Zelikoff, Judith T

    2017-03-01

    Exposure to fine particulate matter (PM2.5) and black carbon (BC) have been linked to negative health risks, but exposure among professional taxi drivers is understudied. This pilot study measured drivers' knowledge, attitudes, and beliefs (KAB) about air pollution compared with direct measures of exposures. Roadside and in-vehicle levels of PM2.5 and BC were continuously measured over a single shift on each subject, and exposures compared with central site monitoring. One hundred drivers completed an air pollution KAB questionnaire, and seven taxicabs participated in preliminary in-cab air sampling. Taxicab PM2.5 and BC concentrations were elevated compared with nearby central monitoring. Average PM2.5 concentrations per 15-min interval were 4-49 μg/m(3). BC levels were also elevated; reaching>10 μg/m(3). Fifty-six of the 100 drivers surveyed believed they were more exposed than non-drivers; 81 believed air pollution causes health problems. Air pollution exposures recorded suggest that driver exposures would likely exceed EPA recommendations if experienced for 24 h. Surveys indicated that driver awareness of this was limited. Future studies should focus on reducing exposures and increasing awareness among taxi drivers.

  14. Analyses on influencing factors of airborne VOCS pollution in taxi cabins.

    PubMed

    Chen, Xiaokai; Feng, Lili; Luo, Huilong; Cheng, Heming

    2014-11-01

    Due to the long time in vehicular cabins, people have high exposure to the airborne volatile organic compounds (VOCS), which will lead to negative effects on human health. In order to analyze the influencing factors of in-car VOCS pollution concentrations, 38 taxis were investigated on the static and closed conditions. The interior air of taxis was collected through activated Tenax adsorption tubes, and the air samples were analyzed with thermally desorbed gas chromatograph. The average concentrations of in-car benzene, toluene, ethylbenzene, xylenes, styrene, butyl acetate, undecane, and total VOCS (TVOC) were 82.7, 212.3, 74.7, 182.3, 24.7, 33.5, 61.3, and 1,441.7 μg/m(3), respectively. Furthermore, the VOCS and TVOC concentrations increase with the rise of in-car temperature and relative humidity, and decrease with the increase of car age and total mileage. In addition, the VOCS and TVOC concentrations are higher in vehicles with small cabins than in ones with big cabins, and change with different sampling sites and various vehicular grades. Finally, according to the multiple linear regression analysis and hierarchical cluster analysis, car age is the most important factor influencing airborne VOCS and TVOC pollution concentrations in vehicular cabins, followed by interior temperature and total mileage.

  15. The Effects of Very Light Jet Air Taxi Operations on Commercial Air Traffic

    NASA Technical Reports Server (NTRS)

    Smith, Jeremy C.; Dollyhigh, Samuel M.

    2006-01-01

    This study investigates the potential effects of Very Light Jet (VLJ) air taxi operations adding to delays experienced by commercial passenger air transportation in the year 2025. The affordable cost relative to existing business jets and ability to use many of the existing small, minimally equipped, but conveniently located airports is projected to stimulate a large demand for the aircraft. The resulting increase in air traffic operations will mainly be at smaller airports, but this study indicates that VLJs have the potential to increase further the pressure of demand at some medium and large airports, some of which are already operating at or near capacity at peak times. The additional delays to commercial passenger air transportation due to VLJ air taxi operations are obtained from simulation results using the Airspace Concepts Evaluation System (ACES) simulator. The direct increase in operating cost due to additional delays is estimated. VLJs will also cause an increase in traffic density, and this study shows increased potential for conflicts due to VLJ operations.

  16. Discrepancy analysis of driving performance of taxi drivers and non-professional drivers for red-light running violation and crash avoidance at intersections.

    PubMed

    Wu, Jiawei; Yan, Xuedong; Radwan, Essam

    2016-06-01

    Due to comfort, convenience, and flexibility, taxis have become increasingly more prevalent in China, especially in large cities. However, many violations and road crashes that occurred frequently were related to taxi drivers. This study aimed to investigate differences in driving performance between taxi drivers and non-professional drivers from the perspectives of red-light running violation and potential crash involvement based on a driving simulation experiment. Two typical scenarios were established in a driving simulator, which includes the red-light running violation scenario and the crash avoidance scenario. There were 49 participants, including 23 taxi drivers (14 males and 9 females) and 26 non-professional drivers (13 males and 13 females) recruited for this experiment. The driving simulation experiment results indicated that non-professional drivers paid more attention to red-light running violations in comparison to taxi drivers who had a higher probability of red-light running violation. Furthermore, it was found that taxi drivers were more inclined to turn the steering wheel in an attempt to avoid a potential collision and non-professional drivers had more abrupt deceleration behaviors when facing a potential crash. Moreover, the experiment results showed that taxi drivers had a smaller crash rate compared to non-professional drivers and had a better performance in terms of crash avoidance at the intersection.

  17. 76 FR 65769 - Application of Friendship Airways, Inc. d/b/a Yellow Air Taxi for Commuter Authority

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-24

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF TRANSPORTATION Office of the Secretary Application of Friendship Airways, Inc. d/b/a Yellow Air Taxi for Commuter... to show cause why it should revoke the Commuter Air Carrier Authorization issued to...

  18. Pathway analysis using (13) C-glycerol and other carbon tracers reveals a bipartite metabolism of Legionella pneumophila.

    PubMed

    Häuslein, Ina; Manske, Christian; Goebel, Werner; Eisenreich, Wolfgang; Hilbi, Hubert

    2016-04-01

    Amino acids represent the prime carbon and energy source for Legionella pneumophila, a facultative intracellular pathogen, which can cause a life-threatening pneumonia termed Legionnaires' disease. Genome, transcriptome and proteome studies indicate that L. pneumophila also utilizes carbon substrates other than amino acids. We show here that glycerol promotes intracellular replication of L. pneumophila in amoeba or macrophages (but not extracellular growth) dependent on glycerol-3-phosphate dehydrogenase, GlpD. An L. pneumophila mutant strain lacking glpD was outcompeted by wild-type bacteria upon co-infection of amoeba, indicating an important role of glycerol during infection. Isotopologue profiling studies using (13) C-labelled substrates were performed in a novel minimal defined medium, MDM, comprising essential amino acids, proline and phenylalanine. In MDM, L. pneumophila utilized (13) C-labelled glycerol or glucose predominantly for gluconeogenesis and the pentose phosphate pathway, while the amino acid serine was used for energy generation via the citrate cycle. Similar results were obtained for L. pneumophila growing intracellularly in amoeba fed with (13) C-labelled glycerol, glucose or serine. Collectively, these results reveal a bipartite metabolism of L. pneumophila, where glycerol and carbohydrates like glucose are mainly fed into anabolic processes, while serine serves as major energy supply.

  19. Visual exploration of big spatio-temporal urban data: a study of New York City taxi trips.

    PubMed

    Ferreira, Nivan; Poco, Jorge; Vo, Huy T; Freire, Juliana; Silva, Cláudio T

    2013-12-01

    As increasing volumes of urban data are captured and become available, new opportunities arise for data-driven analysis that can lead to improvements in the lives of citizens through evidence-based decision making and policies. In this paper, we focus on a particularly important urban data set: taxi trips. Taxis are valuable sensors and information associated with taxi trips can provide unprecedented insight into many different aspects of city life, from economic activity and human behavior to mobility patterns. But analyzing these data presents many challenges. The data are complex, containing geographical and temporal components in addition to multiple variables associated with each trip. Consequently, it is hard to specify exploratory queries and to perform comparative analyses (e.g., compare different regions over time). This problem is compounded due to the size of the data-there are on average 500,000 taxi trips each day in NYC. We propose a new model that allows users to visually query taxi trips. Besides standard analytics queries, the model supports origin-destination queries that enable the study of mobility across the city. We show that this model is able to express a wide range of spatio-temporal queries, and it is also flexible in that not only can queries be composed but also different aggregations and visual representations can be applied, allowing users to explore and compare results. We have built a scalable system that implements this model which supports interactive response times; makes use of an adaptive level-of-detail rendering strategy to generate clutter-free visualization for large results; and shows hidden details to the users in a summary through the use of overlay heat maps. We present a series of case studies motivated by traffic engineers and economists that show how our model and system enable domain experts to perform tasks that were previously unattainable for them.

  20. Taxiing, Take-Off, and Landing Simulation of the High Speed Civil Transport Aircraft

    NASA Technical Reports Server (NTRS)

    Reaves, Mercedes C.; Horta, Lucas G.

    1999-01-01

    The aircraft industry jointly with NASA is studying enabling technologies for higher speed, longer range aircraft configurations. Higher speeds, higher temperatures, and aerodynamics are driving these newer aircraft configurations towards long, slender, flexible fuselages. Aircraft response during ground operations, although often overlooked, is a concern due to the increased fuselage flexibility. This paper discusses modeling and simulation of the High Speed Civil Transport aircraft during taxiing, take-off, and landing. Finite element models of the airframe for various configurations are used and combined with nonlinear landing gear models to provide a simulation tool to study responses to different ground input conditions. A commercial computer simulation program is used to numerically integrate the equations of motion and to compute estimates of the responses using an existing runway profile. Results show aircraft responses exceeding safe acceptable human response levels.

  1. Positive taxis and sustained responsiveness to water motions in larval zebrafish.

    PubMed

    Groneberg, Antonia H; Herget, Ulrich; Ryu, Soojin; De Marco, Rodrigo J

    2015-01-01

    Larval zebrafish (Danio rerio) have become favored subjects for studying the neural bases of behavior. Here, we report a highly stereotyped response of zebrafish larvae to hydrodynamic stimuli. It involves positive taxis, motion damping and sustained responsiveness to flows derived from local, non-stressful water motions. The response depends on the lateral line and has a high sensitivity to stimulus frequency and strength, sensory background and rearing conditions--also encompassing increased threshold levels of response to parallel input. The results show that zebrafish larvae can use near-field detection to locate sources of minute water motions, and offer a unique handle for analyses of hydrodynamic sensing, sensory responsiveness and arousal with accurate control of stimulus properties.

  2. Algerian pearl millet ( Pennisetum glaucum L.) contains XIP but not TAXI and TLXI type xylanase inhibitors.

    PubMed

    Mokrane, Hind; Gebruers, Kurt; Beaugrand, Johnny; Proost, Paul; Nadjemi, Boubekeur; Belhanèche-Bensemra, Naima; Courtin, Christophe M; Delcour, Jan A

    2009-06-24

    An XIP (xylanase inhibiting protein) type xylanase inhibitor was purified from Algerian pearl millet ( Pennisetum glaucum L.) grains and characterized for the first time. Cation exchange and affinity chromatography with immobilized Trichoderma longibrachiatum glycoside hydrolase (GH) family 11 xylanase resulted in electrophoretically pure protein with a molecular mass of 27-29 kDa and a pI value of 6.7. The experimentally determined N-terminal amino acid sequence of the purified XIP protein is 87.5%, identical to that of sorghum ( Sorghum bicolor L.) XIP and 79.2% identical to that of wheat ( Triticum aestivum L.) XIP-I. The biochemical properties of pearl millet XIP are comparable to those described earlier for sorghum XIP, except for the higher specific activity toward a T. longibrachiatum GH family 11 xylanase. On the basis of immunoblot neither TAXI nor TLXI type xylanase inhibitors were detected in pearl millet grains.

  3. Positive taxis and sustained responsiveness to water motions in larval zebrafish

    PubMed Central

    Groneberg, Antonia H.; Herget, Ulrich; Ryu, Soojin; De Marco, Rodrigo J.

    2015-01-01

    Larval zebrafish (Danio rerio) have become favored subjects for studying the neural bases of behavior. Here, we report a highly stereotyped response of zebrafish larvae to hydrodynamic stimuli. It involves positive taxis, motion damping and sustained responsiveness to flows derived from local, non-stressful water motions. The response depends on the lateral line and has a high sensitivity to stimulus frequency and strength, sensory background and rearing conditions—also encompassing increased threshold levels of response to parallel input. The results show that zebrafish larvae can use near-field detection to locate sources of minute water motions, and offer a unique handle for analyses of hydrodynamic sensing, sensory responsiveness and arousal with accurate control of stimulus properties. PMID:25798089

  4. Studying taxis in real time using optical tweezers: applications for Leishmania amazonensis parasites.

    PubMed

    Pozzo, L Y; Fontes, A; de Thomaz, A A; Santos, B S; Farias, P M A; Ayres, D C; Giorgio, S; Cesar, C L

    2009-01-01

    Beads trapped by an optical tweezers can be used as a force transducer for measuring forces of the same order of magnitude as typical forces induced by flagellar motion. We used an optical tweezers to study chemotaxis by observing the force response of a flagellated microorganism when placed in a gradient of attractive chemical substances. This report shows such observations for Leishmania amazonensis, responsible for leishmaniasis, a serious disease. We quantified the movement of this protozoan for different gradients of glucose. We were able to observe both the strength and the directionality of the force. The characterization of the chemotaxis of these parasites can help to understand the mechanics of infection and improve the treatments employed for this disease. This methodology can be used to quantitatively study the taxis of any kind of flagellated microorganisms under concentration gradients of different chemical substances, or even other types of variable gradients such as temperature and pressure.

  5. Changes in functional connectivity dynamics associated with vigilance network in taxi drivers.

    PubMed

    Shen, Hui; Li, Zhenfeng; Qin, Jian; Liu, Qiang; Wang, Lubin; Zeng, Ling-Li; Li, Hong; Hu, Dewen

    2016-01-01

    An increasing number of neuroimaging studies have suggested that the fluctuations of low-frequency resting-state functional connectivity (FC) are not noise but are instead linked to the shift between distinct cognitive states. However, there is very limited knowledge about whether and how the fluctuations of FC at rest are influenced by long-term training and experience. Here, we investigated how the dynamics of resting-state FC are linked to driving behavior by comparing 20 licensed taxi drivers with 20 healthy non-drivers using a sliding window approach. We found that the driving experience could be effectively decoded with 90% (p<0.001) accuracy by the amplitude of low-frequency fluctuations in some specific connections, based on a multivariate pattern analysis technique. Interestingly, the majority of these connections fell within a set of distributed regions named "the vigilance network". Moreover, the decreased amplitude of the FC fluctuations within the vigilance network in the drivers was negatively correlated with the number of years that they had driven a taxi. Furthermore, temporally quasi-stable functional connectivity segmentation revealed significant differences between the drivers and non-drivers in the dwell time of specific vigilance-related transient brain states, although the brain's repertoire of functional states was preserved. Overall, these results suggested a significant link between the changes in the time-dependent aspects of resting-state FC within the vigilance network and long-term driving experiences. The results not only improve our understanding of how the brain supports driving behavior but also shed new light on the relationship between the dynamics of functional brain networks and individual behaviors.

  6. Sociodemographic factors associated with aggressive driving behaviors of 3-wheeler taxi drivers in Sri Lanka.

    PubMed

    Akalanka, Ediriweera Chintana; Fujiwara, Takeo; Desapriya, Ediriweera; Peiris, Dinithi C; Scime, Giulia

    2012-01-01

    Little is known about the nature and scope of aggressive driving in developing countries. The objective of this study is to specifically examine the sociodemographic factors associated with aggressive driving behavior among 3-wheeler taxi drivers in Sri Lanka. Convenience samples of 3-wheeler taxi drivers from Rathnapura, Ahaliyagoda, Sri Lanka were surveyed from June to August 2006. Analyses included bivariate and multivariate logistic regression. Drivers with less than high school education were 3.5 times more likely to drive aggressively (odds ratio [OR] = 3.46; 95% confidence interval [CI] = 1.08, 11.1). Single drivers were 9 times more likely to run red lights (OR = 8.74; 95% CI = 2.18, 35.0), and being single was a major risk factor for drunk driving (OR = 4.80; 95% CI = 1.23, 18.7). Furthermore, high school completers were 4 times more likely to bribe a policeman (OR = 4.27; 95% CI = 1.23, 14.9) when caught violating the road rules. Aggressive driving and risk-taking behavior are amenable to policy initiatives, and preventive programs targeted at key groups could be used to improve road safety in Sri Lanka. This study demonstrates that aggressive driving behavior is associated with sociodemographic factors, including the level of education, marital status, and other socioeconomic factors. Hence, economic factors should be addressed to find solutions to traffic-related issues. It will be the government's and policy makers' responsibility to try and understand the economic factors behind risky road behavior and bribe-taking behavior prior to legislating or enforcing new laws.

  7. Occupational and personal factors associated with acquired lumbar spondylolisthesis of urban taxi drivers

    PubMed Central

    Chen, J; Chan, W; Katz, J; Chang, W; Christiani, D

    2004-01-01

    Aims: To investigate the occupational and personal factors associated with lumbar spondylolisthesis in taxi drivers. Methods: Cross-sectional analysis of the baseline data from the Taxi Drivers' Health Study cohort. Information was retrieved from the medical records of standardised lumbosacral spine plain films, age, and anthropometric measures of 1242 subjects. Acquired spondylolisthesis (ASL) was defined as non-lytic spondylolisthesis involving lumbar spines above L5. Questionnaires were used to gather information on demographic features, health behaviours, exercise, work related physical and psychosocial factors, and driving time profiles. Multiple logistic regression was used to model the odds ratio (OR) for prevalent ASL cases associated with personal and occupational factors. Results: A total of 40 cases (3.2%) of ASL were diagnosed. Among those driving ⩽5 years, 6–15 years, and >15 years, the estimated prevalence of lumbar spondylolisthesis was 1.1%, 2.4%, and 7.1% respectively. Results of multiple logistic regression suggested that taxicab driving >15 years (OR = 3.4, 95% CI 1.1 to 10.7, compared to driving ⩽5 years), age (OR = 2.6, 95% CI 1.1 to 6.6 for age 46–55; and OR = 4.8, 95% CI 1.8 to 12.9 for age >55), body mass index ⩾25 kg/m2 (OR = 2.2, 95% CI 1.1 to 4.6), and frequent strenuous exercise (OR = 2.2, 95% CI 1.1 to 4.5) were significantly associated with higher prevalence of spondylolisthesis. There was a consistent likely exposure-response relation between professional seniority and ASL prevalence. Conclusions: Longitudinal studies are needed to confirm the observed association between professional driving and spondylolisthesis, and to examine further the specific occupational exposures accountable for this association. PMID:15550605

  8. Identification and functional characterization of a novel bipartite nuclear localization sequence in ARID1A.

    PubMed

    Bateman, Nicholas W; Shoji, Yutaka; Conrads, Kelly A; Stroop, Kevin D; Hamilton, Chad A; Darcy, Kathleen M; Maxwell, George L; Risinger, John I; Conrads, Thomas P

    2016-01-01

    AT-rich interactive domain-containing protein 1A (ARID1A) is a recently identified nuclear tumor suppressor frequently altered in solid tumor malignancies. We have identified a bipartite-like nuclear localization sequence (NLS) that contributes to nuclear import of ARID1A not previously described. We functionally confirm activity using GFP constructs fused with wild-type or mutant NLS sequences. We further show that cyto-nuclear localized, bipartite NLS mutant ARID1A exhibits greater stability than nuclear-localized, wild-type ARID1A. Identification of this undescribed functional NLS within ARID1A contributes vital insights to rationalize the impact of ARID1A missense mutations observed in patient tumors.

  9. Identifying the minor set cover of dense connected bipartite graphs via random matching edge sets

    NASA Astrophysics Data System (ADS)

    Hamilton, Kathleen E.; Humble, Travis S.

    2017-04-01

    Using quantum annealing to solve an optimization problem requires minor embedding a logic graph into a known hardware graph. In an effort to reduce the complexity of the minor embedding problem, we introduce the minor set cover (MSC) of a known graph G: a subset of graph minors which contain any remaining minor of the graph as a subgraph. Any graph that can be embedded into G will be embeddable into a member of the MSC. Focusing on embedding into the hardware graph of commercially available quantum annealers, we establish the MSC for a particular known virtual hardware, which is a complete bipartite graph. We show that the complete bipartite graph K_{N,N} has a MSC of N minors, from which K_{N+1} is identified as the largest clique minor of K_{N,N}. The case of determining the largest clique minor of hardware with faults is briefly discussed but remains an open question.

  10. Bipartite entangled stabilizer mutually unbiased bases as maximum cliques of Cayley graphs

    SciTech Connect

    Dam, Wim van; Howard, Mark

    2011-07-15

    We examine the existence and structure of particular sets of mutually unbiased bases (MUBs) in bipartite qudit systems. In contrast to well-known power-of-prime MUB constructions, we restrict ourselves to using maximally entangled stabilizer states as MUB vectors. Consequently, these bipartite entangled stabilizer MUBs (BES MUBs) provide no local information, but are sufficient and minimal for decomposing a wide variety of interesting operators including (mixtures of) Jamiolkowski states, entanglement witnesses, and more. The problem of finding such BES MUBs can be mapped, in a natural way, to that of finding maximum cliques in a family of Cayley graphs. Some relationships with known power-of-prime MUB constructions are discussed, and observables for BES MUBs are given explicitly in terms of Pauli operators.

  11. Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells

    SciTech Connect

    Hisada-Ishii, Shoji; Ebihara, Mizuki; Kobayashi, Nao; Kitagawa, Yasuo . E-mail: yasuok@agr.nagoya-u.ac.jp

    2007-03-02

    Matrin 3, a nuclear matrix protein has potential (1) to withhold promiscuously edited RNAs within the nucleus in cooperation with p54{sup nrb} and PSF (2) to mediate NMDA-induced neuronal death, and (3) to modulate promoter activity of genes proximal to matrix/scaffold attachment region (MAR/SAR). We identified a bipartite nuclear localization signal (NLS) of chicken matrin 3 (cmatr3) at residues 583-602. By expressing green fluorescent protein (GFP) fused to the NLS mutant in chicken DT40 cells, we showed an essential role of the NLS for cell proliferation. Furthermore, we showed that both clusters of basic amino acids and a linker of the bipartite NLS were essential and sufficient for the nuclear import of GFP. Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not.

  12. On the Bipartite Consensus for Generic Linear Multiagent Systems With Input Saturation.

    PubMed

    Qin, Jiahu; Fu, Weiming; Zheng, Wei Xing; Gao, Huijun

    2016-10-11

    The bipartite consensus problem for a group of homogeneous generic linear agents with input saturation under directed interaction topology is examined. It is established that if each agent is asymptotically null controllable with bounded controls and the interaction topology described by a signed digraph is structurally balanced and contains a spanning tree, then the semi-global bipartite consensus can be achieved for the linear multiagent system by a linear feedback controller with the control gain being designed via the low gain feedback technique. The convergence analysis of the proposed control strategy is performed by means of the Lyapunov method which can also specify the convergence rate. At last, the validity of the theoretical findings is demonstrated by two simulation examples.

  13. Congenital anomaly of combined atlas-odontoid process fusion and bipartite atlas.

    PubMed

    Gil, Jea Ryoung; Kim, Wan Tae; Seo, Min Jeong

    2015-12-01

    Congenital fusion of the atlas with the odontoid process of the axis is a very rare condition caused by a segmental defect of the first cervical somite. Only 9 such cases have been reported in the literature to date. The bipartite atlas, another well-documented rare anomaly, has been observed in only 0.1% of the general population. We describe the first case of a 70-year-old male with both of these complex congenital anomalies.

  14. Theory of ferrimagnetism in the Hubbard model on bipartite lattices with spectral symmetry

    NASA Astrophysics Data System (ADS)

    Xue, Yang; He, Jing; Zhang, Xing-Hai; Kou, Su-Peng

    2015-08-01

    The Hubbard model is one of the most important models in condensed matter physics. In this paper, we developed a theory of ferrimagnetism in the Hubbard model on bipartite lattices with spectral symmetry. By taking three models as examples, we studied the ferrimagnetic orders that emerge from three typical fermionic systems—metal, semi-metal and (Chern) insulator. In particular, we found that there may exist various ferrimagnetic orders and explored the universal features.

  15. Theory of ferrimagnetism in the Hubbard model on bipartite lattices with spectral symmetry.

    PubMed

    Xue, Yang; He, Jing; Zhang, Xing-Hai; Kou, Su-Peng

    2015-09-09

    The Hubbard model is one of the most important models in condensed matter physics. In this paper, we developed a theory of ferrimagnetism in the Hubbard model on bipartite lattices with spectral symmetry. By taking three models as examples, we studied the ferrimagnetic orders that emerge from three typical fermionic systems--metal, semi-metal and (Chern) insulator. In particular, we found that there may exist various ferrimagnetic orders and explored the universal features.

  16. SibRank: Signed bipartite network analysis for neighbor-based collaborative ranking

    NASA Astrophysics Data System (ADS)

    Shams, Bita; Haratizadeh, Saman

    2016-09-01

    Collaborative ranking is an emerging field of recommender systems that utilizes users' preference data rather than rating values. Unfortunately, neighbor-based collaborative ranking has gained little attention despite its more flexibility and justifiability. This paper proposes a novel framework, called SibRank that seeks to improve the state of the art neighbor-based collaborative ranking methods. SibRank represents users' preferences as a signed bipartite network, and finds similar users, through a novel personalized ranking algorithm in signed networks.

  17. Information Filtering via Clustering Coefficients of User-Object Bipartite Networks

    NASA Astrophysics Data System (ADS)

    Guo, Qiang; Leng, Rui; Shi, Kerui; Liu, Jian-Guo

    The clustering coefficient of user-object bipartite networks is presented to evaluate the overlap percentage of neighbors rating lists, which could be used to measure interest correlations among neighbor sets. The collaborative filtering (CF) information filtering algorithm evaluates a given user's interests in terms of his/her friends' opinions, which has become one of the most successful technologies for recommender systems. In this paper, different from the object clustering coefficient, users' clustering coefficients of user-object bipartite networks are introduced to improve the user similarity measurement. Numerical results for MovieLens and Netflix data sets show that users' clustering effects could enhance the algorithm performance. For MovieLens data set, the algorithmic accuracy, measured by the average ranking score, can be improved by 12.0% and the diversity could be improved by 18.2% and reach 0.649 when the recommendation list equals to 50. For Netflix data set, the accuracy could be improved by 14.5% at the optimal case and the popularity could be reduced by 13.4% comparing with the standard CF algorithm. Finally, we investigate the sparsity effect on the performance. This work indicates the user clustering coefficients is an effective factor to measure the user similarity, meanwhile statistical properties of user-object bipartite networks should be investigated to estimate users' tastes.

  18. Modelling the evolution of a bi-partite network Peer referral in interlocking directorates*

    PubMed Central

    Edling, Christofer

    2010-01-01

    A central part of relational ties between social actors are constituted by shared affiliations and events. The action of joint participation reinforces personal ties between social actors as well as mutually shared values and norms that in turn perpetuate the patterns of social action that define groups. Therefore the study of bipartite networks is central to social science. Furthermore, the dynamics of these processes suggests that bipartite networks should not be considered static structures but rather be studied over time. In order to model the evolution of bipartite networks empirically we introduce a class of models and a Bayesian inference scheme that extends previous stochastic actor-oriented models for unimodal graphs. Contemporary research on interlocking directorates provides an area of research in which it seems reasonable to apply the model. Specifically, we address the question of how tie formation, i.e. director recruitment, contributes to the structural properties of the interlocking directorate network. For boards of directors on the Stockholm stock exchange we propose that a prolific mechanism in tie formation is that of peer referral. The results indicate that such a mechanism is present, generating multiple interlocks between boards. PMID:24944435

  19. Repellent taxis in response to nickel ion requires neither Ni2+ transport nor the periplasmic NikA binding protein.

    PubMed

    Englert, Derek L; Adase, Christopher A; Jayaraman, Arul; Manson, Michael D

    2010-05-01

    Ni(2+) and Co(2+) are sensed as repellents by the Escherichia coli Tar chemoreceptor. The periplasmic Ni(2+) binding protein, NikA, has been suggested to sense Ni(2+). We show here that neither NikA nor the membrane-bound NikB and NikC proteins of the Ni(2+) transport system are required for repellent taxis in response to Ni(2+).

  20. Taxi drivers' views on risky driving behavior in Tehran: a qualitative study using a social marketing approach.

    PubMed

    Shams, Mohsen; Shojaeizadeh, Davoud; Majdzadeh, Reza; Rashidian, Arash; Montazeri, Ali

    2011-05-01

    The use of the social marketing approach for public health issues is increasing. This approach uses marketing concepts borrowed from the principles of commercial marketing to promote beneficial health behaviors. In this qualitative study, four focus groups involving 42 participants were used in consumer research to explore taxi drivers' views on the driving situation and the determinants of risky driving behaviors in Tehran, as well as to gather their ideas for developing a social marketing program to reduce risky driving behaviors among taxi drivers in Tehran, Iran. Participants were asked to respond to questions that would guide the development of a marketing mix, or four Ps (product, price, place and promotion). The discussions determined that the program product should involve avoiding risky driving behaviors through increased attention to driving. They pointed out that developing and communicating with a well-designed persuasive message meant to draw their attention to driving could affect their driving behaviors. In addition, participants identified price, place and promotion strategies. They offered suggestions for marketing nonrisky driving to the target audience. The focus group discussions generated important insights into the values and the motivations that affect consumers' decisions to adopt the product. The focus group guided the development of a social marketing program to reduce risky driving behaviors in taxi drivers in Tehran, Iran.

  1. TrajGraph: A Graph-Based Visual Analytics Approach to Studying Urban Network Centralities Using Taxi Trajectory Data.

    PubMed

    Huang, Xiaoke; Zhao, Ye; Yang, Jing; Zhang, Chong; Ma, Chao; Ye, Xinyue

    2016-01-01

    We propose TrajGraph, a new visual analytics method, for studying urban mobility patterns by integrating graph modeling and visual analysis with taxi trajectory data. A special graph is created to store and manifest real traffic information recorded by taxi trajectories over city streets. It conveys urban transportation dynamics which can be discovered by applying graph analysis algorithms. To support interactive, multiscale visual analytics, a graph partitioning algorithm is applied to create region-level graphs which have smaller size than the original street-level graph. Graph centralities, including Pagerank and betweenness, are computed to characterize the time-varying importance of different urban regions. The centralities are visualized by three coordinated views including a node-link graph view, a map view and a temporal information view. Users can interactively examine the importance of streets to discover and assess city traffic patterns. We have implemented a fully working prototype of this approach and evaluated it using massive taxi trajectories of Shenzhen, China. TrajGraph's capability in revealing the importance of city streets was evaluated by comparing the calculated centralities with the subjective evaluations from a group of drivers in Shenzhen. Feedback from a domain expert was collected. The effectiveness of the visual interface was evaluated through a formal user study. We also present several examples and a case study to demonstrate the usefulness of TrajGraph in urban transportation analysis.

  2. Orbital Transfer Vehicle (space taxi) with aerobraking at Earth and Mars

    NASA Technical Reports Server (NTRS)

    1987-01-01

    This report shall cover all major aspects of the design of an Aeroassisted Manned Transfer Vehicle (or TAXI) for use as part of advanced manned Mars missions based on a cycling ship concept. Along with the heliocentric orbiting Cycling Spacecraft, such a TAXI would be a primary component of a long-term transportation system for Mars exploration. The Aeroassisted Manned Transfer Vehicle (AMTV) design developed shall operate along transfer trajectories between Earth and a Cycling Spacecraft (designed by the University of Michigan) and Mars. All operations of the AMTV shall be done primarily within the sphere of influence of the two planets. Maximum delta-V's for the vehicle have been established near 9 km/sec, with transfer durations of about 3 days. Acceleration deltaV's will be accomplished using 3 SSME-based hydrogen-oxygen chemical rockets (l(sub sp) = 485 sec & Thrust greater than = 300,00 Ib(sub f)/engine) with a thrust vector directly opposite the aerobraking deceleration vector. The aerobraking deceleration portion of an AMTV mission would be accomplished in this design by a moderate L/D aeroshield of an ellipsoidally-blunt, raked-off, elliptic cone (EBROEC) shape. The reusable thermal protection material comprising the shield will consist of a flexible, multi-layer, ceramic fabric stretched over a lightweight, rigid, shape - defining truss structure. Behind this truss, other components, including the engine supports, would be attached and protected from heating during aerobraking passes. Among these other components would be 2 LOX tanks and 4 LH2 tanks (and their support frames) holding over 670,000 lbm of propellant necessary to impart the required delta-V to the 98,000 lbm burnout mass vehicle. A 20,000 lbm crew module with docking port (oriented parallel to the accel./decel. axis) will provide accommodations for 9 crew members (11 under extreme conditions) for durations up to seven days, thus allowing extra time for emergency situations. This AMTV will be

  3. Regional Webgis User Access Patterns Based on a Weighted Bipartite Network

    NASA Astrophysics Data System (ADS)

    Li, R.; Shen, Y.; Huang, W.; Wu, H.

    2015-07-01

    With the rapid development of geographic information services, Web Geographic Information Systems (WebGIS) have become an indispensable part of everyday life; correspondingly, map search engines have become extremely popular with users and WebGIS sites receive a massive volume of requests for access. These WebGIS users and the content accessed have regional characteristics; to understand regional patterns, we mined regional WebGIS user access patterns based on a weighted bipartite network. We first established a weighted bipartite network model for regional user access to a WebGIS. Then, based on the massive user WebGIS access logs, we clustered geographic information accessed and thereby identified hot access areas. Finally we quantitatively analyzed the access interests of regional users and the visitation volume characteristics of regional user access to these hot access areas in terms of user access permeability, user usage rate, and user access viscosity. Our research results show that regional user access to WebGIS is spatially aggregated, and the hot access areas that regional users accessed are associated with specific periods of time. Most regional user contact with hot accessed areas is variable and intermittent but for some users, their access to certain areas is continuous as it is associated with ongoing or recurrent objectives. The weighted bipartite network model for regional user WebGIS access provides a valid analysis method for studying user behaviour in WebGIS and the proposed access pattern exhibits access interest of regional user is spatiotemporal aggregated and presents a heavy-tailed distribution. Understanding user access patterns is good for WebGIS providers and supports better operational decision-making, and helpful for developers when optimizing WebGIS system architecture and deployment, so as to improve the user experience and to expand the popularity of WebGIS.

  4. Bipartite Topology of Treponema pallidum Repeat Proteins C/D and I

    PubMed Central

    Anand, Arvind; LeDoyt, Morgan; Karanian, Carson; Luthra, Amit; Koszelak-Rosenblum, Mary; Malkowski, Michael G.; Puthenveetil, Robbins; Vinogradova, Olga; Radolf, Justin D.

    2015-01-01

    We previously identified Treponema pallidum repeat proteins TprC/D, TprF, and TprI as candidate outer membrane proteins (OMPs) and subsequently demonstrated that TprC is not only a rare OMP but also forms trimers and has porin activity. We also reported that TprC contains N- and C-terminal domains (TprCN and TprCC) orthologous to regions in the major outer sheath protein (MOSPN and MOSPC) of Treponema denticola and that TprCC is solely responsible for β-barrel formation, trimerization, and porin function by the full-length protein. Herein, we show that TprI also possesses bipartite architecture, trimeric structure, and porin function and that the MOSPC-like domains of native TprC and TprI are surface-exposed in T. pallidum, whereas their MOSPN-like domains are tethered within the periplasm. TprF, which does not contain a MOSPC-like domain, lacks amphiphilicity and porin activity, adopts an extended inflexible structure, and, in T. pallidum, is tightly bound to the protoplasmic cylinder. By thermal denaturation, the MOSPN and MOSPC-like domains of TprC and TprI are highly thermostable, endowing the full-length proteins with impressive conformational stability. When expressed in Escherichia coli with PelB signal sequences, TprC and TprI localize to the outer membrane, adopting bipartite topologies, whereas TprF is periplasmic. We propose that the MOSPN-like domains enhance the structural integrity of the cell envelope by anchoring the β-barrels within the periplasm. In addition to being bona fide T. pallidum rare outer membrane proteins, TprC/D and TprI represent a new class of dual function, bipartite bacterial OMP. PMID:25805501

  5. Reactivation of latent herpes viruses in cosmonauts during a soyuz taxi mission

    NASA Astrophysics Data System (ADS)

    Mehta, Satish K.; Pierson, Duane L.

    2007-09-01

    The hypothesis tested by this project is that space flight increases the incidence and duration of herpes virus reactivation and shedding in saliva. Saliva, urine, and blood samples were collected from 3 crew members who participated in a 14-day Odessa Soyuz taxi mission. Saliva samples were collected before, during, and after the mission, and blood and urine were collected before and after the mission. The saliva and urine samples were analyzed using the polymerase chain reaction to detect the presence of 3 important herpes viruses. Epstein-Barr virus (EBV) and varicella-zoster virus (VZV) were tested in saliva, and cytomegalovirus (CMV) was measured in urine samples. Plasma antibodies levels to these viruses were determined by enzyme-linked immunosorbent assay before and after flight. EBV reactivated before, during, and after flight; CMV reactivated before and after flight; and VZV reactivated during and after flight. In other studies, greater frequencies of positive samples and greater numbers of copies of viral DNA have been found. No increases in titer of antibodies to these viruses were found, suggesting that an immune response may not be necessary for reactivation.

  6. Effect of steady and unsteady flow on chemoattractant plume formation and sperm taxis

    NASA Astrophysics Data System (ADS)

    Bell, Allison F.; Crimaldi, John P.

    2015-08-01

    The formation of chemoattractant plumes around benthic invertebrate eggs in steady and unsteady shear flows is investigated for a range of shear rates, and the ability of sperm to navigate within these plumes is assessed using several chemotactic strategies. Although many of the details of sperm taxis remain uncertain, we investigate the role of basic processes using a toy model in two dimensions. Search strategies in 2D are intrinsically less complex than 3D, but many of the basic components are similar, and the simplified geometry permits an understanding and identification of the key factors of navigation tactics. Numerical simulations are used to model the advection and diffusion of the chemoattractant within the different flows, using three different sperm swimming behaviors. A Monte-Carlo approach is then used to determine the probability of a sperm reaching an egg for a range of flow conditions, initial conditions, and swimming behaviors. The spatial structure of chemoattractant plumes at the scale of the gametes is also investigated. Success rates for locating an egg decrease monotonically with increasing shear rates, and a definitive hierarchical ordering of the tested swimming strategies is identified. A conceptual framework to study and identify important aspects of this fundamental process to support further studies is provided.

  7. Strong monogamy of bipartite and genuine multipartite entanglement: the Gaussian case.

    PubMed

    Adesso, Gerardo; Illuminati, Fabrizio

    2007-10-12

    We demonstrate the existence of general constraints on distributed quantum correlations, which impose a trade-off on bipartite and multipartite entanglement at once. For all N-mode Gaussian states under permutation invariance, we establish exactly a monogamy inequality, stronger than the traditional one, that by recursion defines a proper measure of genuine N-partite entanglement. Strong monogamy holds as well for subsystems of arbitrary size, and the emerging multipartite entanglement measure is found to be scale invariant. We unveil its operational connection with the optimal fidelity of continuous variable teleportation networks.

  8. Optimizing local protocols for implementing bipartite nonlocal unitary gates using prior entanglement and classical communication

    SciTech Connect

    Cohen, Scott M.

    2010-06-15

    We present a method of optimizing recently designed protocols for implementing an arbitrary nonlocal unitary gate acting on a bipartite system. These protocols use only local operations and classical communication with the assistance of entanglement, and they are deterministic while also being 'one-shot', in that they use only one copy of an entangled resource state. The optimization minimizes the amount of entanglement needed, and also the amount of classical communication, and it is often the case that less of each of these resources is needed than with an alternative protocol using two-way teleportation.

  9. Bipartite entanglement entropy in massive two-dimensional quantum field theory.

    PubMed

    Doyon, Benjamin

    2009-01-23

    Recently, Cardy, Castro Alvaredo, and the author obtained the first exponential correction to saturation of the bipartite entanglement entropy at large region lengths in massive two-dimensional integrable quantum field theory. It depends only on the particle content of the model, and not on the way particles scatter. Based on general analyticity arguments for form factors, we propose that this result is universal, and holds for any massive two-dimensional model (also out of integrability). We suggest a link of this result with counting pair creations far in the past.

  10. Robust tripartite-to-bipartite entanglement localization by weak measurements and reversal

    NASA Astrophysics Data System (ADS)

    Yao, Chunmei; Ma, Zhi-Hao; Chen, Zhi-Hua; Serafini, Alessio

    2012-08-01

    We propose a robust and efficient approach for tripartite-to-bipartite entanglement localization. By using weak measurements and quantum measurement reversal, an almost maximal entangled state shared by two parties can be generated with the assistance of the third party by local quantum operations and classical communication from a W-like state. We show that this approach works well in the presence of losses and phase diffusion. Our method provides an active way to fight against decoherence, and might help for quantum communication and distributed quantum computation.

  11. Classification of 4-qubit Entangled Graph States According to Bipartite Entanglement, Multipartite Entanglement and Non-local Properties

    NASA Astrophysics Data System (ADS)

    Assadi, Leila; Jafarpour, Mojtaba

    2016-11-01

    We use concurrence to study bipartite entanglement, Meyer-Wallach measure and its generalizations to study multi-partite entanglement and MABK and SASA inequalities to study the non-local properties of the 4-qubit entangled graph states, quantitatively. Then, we present 3 classifications, each one in accordance with one of the aforementioned properties. We also observe that the classification according to multipartite entanglement does exactly coincide with that according to nonlocal properties, but does not match with that according to bipartite entanglement. This observation signifies the fact that non-locality and multipartite entanglement enjoy the same basic underlying principles, while bipartite entanglement may not reveal the non-locality issue in its entirety.

  12. AcCNET (Accessory Genome Constellation Network): comparative genomics software for accessory genome analysis using bipartite networks.

    PubMed

    Lanza, Val F; Baquero, Fernando; de la Cruz, Fernando; Coque, Teresa M

    2017-01-15

    AcCNET (Accessory genome Constellation Network) is a Perl application that aims to compare accessory genomes of a large number of genomic units, both at qualitative and quantitative levels. Using the proteomes extracted from the analysed genomes, AcCNET creates a bipartite network compatible with standard network analysis platforms. AcCNET allows merging phylogenetic and functional information about the concerned genomes, thus improving the capability of current methods of network analysis. The AcCNET bipartite network opens a new perspective to explore the pangenome of bacterial species, focusing on the accessory genome behind the idiosyncrasy of a particular strain and/or population.

  13. AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response

    PubMed Central

    2013-01-01

    Background With the continued proliferation of high-throughput biological experiments, there is a pressing need for tools to integrate the data produced in ways that produce biologically meaningful conclusions. Many microarray studies have analysed transcriptomic data from a pathway perspective, for instance by testing for KEGG pathway enrichment in sets of upregulated genes. However, the increasing availability of species-specific metabolic models provides the opportunity to analyse these data in a more objective, system-wide manner. Results Here we introduce ambient (Active Modules for Bipartite Networks), a simulated annealing approach to the discovery of metabolic subnetworks (modules) that are significantly affected by a given genetic or environmental change. The metabolic modules returned by ambient are connected parts of the bipartite network that change coherently between conditions, providing a more detailed view of metabolic changes than standard approaches based on pathway enrichment. Conclusions ambient is an effective and flexible tool for the analysis of high-throughput data in a metabolic context. The same approach can be applied to any system in which reactions (or metabolites) can be assigned a score based on some biological observation, without the limitation of predefined pathways. A Python implementation of ambient is available at http://www.theosysbio.bio.ic.ac.uk/ambient. PMID:23531303

  14. A mathematical model for generating bipartite graphs and its application to protein networks

    NASA Astrophysics Data System (ADS)

    Nacher, J. C.; Ochiai, T.; Hayashida, M.; Akutsu, T.

    2009-12-01

    Complex systems arise in many different contexts from large communication systems and transportation infrastructures to molecular biology. Most of these systems can be organized into networks composed of nodes and interacting edges. Here, we present a theoretical model that constructs bipartite networks with the particular feature that the degree distribution can be tuned depending on the probability rate of fundamental processes. We then use this model to investigate protein-domain networks. A protein can be composed of up to hundreds of domains. Each domain represents a conserved sequence segment with specific functional tasks. We analyze the distribution of domains in Homo sapiens and Arabidopsis thaliana organisms and the statistical analysis shows that while (a) the number of domain types shared by k proteins exhibits a power-law distribution, (b) the number of proteins composed of k types of domains decays as an exponential distribution. The proposed mathematical model generates bipartite graphs and predicts the emergence of this mixing of (a) power-law and (b) exponential distributions. Our theoretical and computational results show that this model requires (1) growth process and (2) copy mechanism.

  15. On Parallel Push-Relabel based Algorithms for Bipartite Maximum Matching

    SciTech Connect

    Langguth, Johannes; Azad, Md Ariful; Halappanavar, Mahantesh; Manne, Fredrik

    2014-07-01

    We study multithreaded push-relabel based algorithms for computing maximum cardinality matching in bipartite graphs. Matching is a fundamental combinatorial (graph) problem with applications in a wide variety of problems in science and engineering. We are motivated by its use in the context of sparse linear solvers for computing maximum transversal of a matrix. We implement and test our algorithms on several multi-socket multicore systems and compare their performance to state-of-the-art augmenting path-based serial and parallel algorithms using a testset comprised of a wide range of real-world instances. Building on several heuristics for enhancing performance, we demonstrate good scaling for the parallel push-relabel algorithm. We show that it is comparable to the best augmenting path-based algorithms for bipartite matching. To the best of our knowledge, this is the first extensive study of multithreaded push-relabel based algorithms. In addition to a direct impact on the applications using matching, the proposed algorithmic techniques can be extended to preflow-push based algorithms for computing maximum flow in graphs.

  16. X-36 Tailless Fighter Agility Research Aircraft on lakebed during high-speed taxi tests

    NASA Technical Reports Server (NTRS)

    1996-01-01

    The NASA/McDonnell Douglas Corporation (MDC) X-36 Tailless Fighter Agility Research Aircraft undergoes high-speed taxi tests on Rogers Dry Lake at NASA Dryden Flight Research Center, Edwards, California, on October 17, 1996. The aircraft was tested at speeds up to 85 knots. Normal takeoff speed would be 110 knots. More taxi and radio frequency tests were slated before it's first flight would be made. This took place on May 17, 1997. The NASA/Boeing X-36 Tailless Fighter Agility Research Aircraft program successfully demonstrated the tailless fighter design using advanced technologies to improve the maneuverability and survivability of possible future fighter aircraft. The program met or exceeded all project goals. For 31 flights during 1997 at the Dryden Flight Research Center, Edwards, California, the project team examined the aircraft's agility at low speed / high angles of attack and at high speed / low angles of attack. The aircraft's speed envelope reached up to 206 knots (234 mph). This aircraft was very stable and maneuverable. It handled very well. The X-36 vehicle was designed to fly without the traditional tail surfaces common on most aircraft. Instead, a canard forward of the wing was used as well as split ailerons and an advanced thrust-vectoring nozzle for directional control. The X-36 was unstable in both pitch and yaw axes, so an advanced, single-channel digital fly-by-wire control system (developed with some commercially available components) was put in place to stabilize the aircraft. Using a video camera mounted in the nose of the aircraft and an onboard microphone, the X-36 was remotely controlled by a pilot in a ground station virtual cockpit. A standard fighter-type head-up display (HUD) and a moving-map representation of the vehicle's position within the range in which it flew provided excellent situational awareness for the pilot. This pilot-in-the-loop approach eliminated the need for expensive and complex autonomous flight control systems

  17. Myocardial infarction among male bus, taxi, and lorry drivers in middle Sweden.

    PubMed Central

    Gustavsson, P; Alfredsson, L; Brunnberg, H; Hammar, N; Jakobsson, R; Reuterwall, C; Ostlin, P

    1996-01-01

    OBJECTIVES: The aim of the present case-referent study was to investigate the incidence of myocardial infarction among male professional drivers, taking the type of vehicles and area of residence into account. METHODS: The study base comprised all men aged 30-74 in five counties in middle Sweden during 1976-81 or 1976-84. Incident cases of the first episode of myocardial infarction were identified from registers of hospital admissions and causes of deaths. Referents were selected randomly from the study base. Information about occupation was obtained from the national censuses in 1970 and 1975. The possible impact from tobacco smoking and overweight were evaluated by simulations in combination with indirect data on these factors. RESULTS: The incidence of myocardial infarction was increased among bus drivers in Stockholm (relative risk (RR) = 1.53, 95% confidence interval (95% CI) 1.15-2.05), and among taxi drivers both in Stockholm (RR 1.65, 95% CI 1.30-2.11) and in the surrounding rural counties (RR 1.82, 95% CI 1.17-2.82). A smaller increase was found among long distance lorry drivers, whereas the relative risk among short distance lorry drivers was close to unity. Indirect comparisons make it unlikely that the excess among bus drivers in Stockholm could be explained by uncontrolled confounding from tobacco smoking or overweight. A very high proportion (more than 80%) of urban bus drivers in Sweden report a combination of high psychological demands and low control at work. CONCLUSIONS: Different types of drivers are at different risk of myocardial infarction. Bus drivers in urban areas seem to be at an increased risk, which is unlikely to be explained by uncontrolled confounding from tobacco smoking or overweight. Psychosocial work conditions may play a part in the increased incidence of myocardial infarction among urban bus drivers and should be investigated further. PMID:8664960

  18. Eclipse program QF-106 aircraft taxies at airport in Mojave, California

    NASA Technical Reports Server (NTRS)

    1997-01-01

    View of QF-106 airplane for the Eclipse project taxiing on the runway at Mojave Airport, California. In 1997 and 1998, the Dryden Flight Research Center at Edwards, California, supported and hosted a Kelly Space & Technology, Inc. project called Eclipse, which sought to demonstrate the feasibility of a reusable tow-launch vehicle concept. The project goal was to successfully tow, inflight, a modified QF-106 delta-wing aircraft with an Air Force C-141A transport aircraft. This would demonstrate the possibility of towing and launching an actual launch vehicle from behind a tow plane. Dryden was the responsible test organization and had flight safety responsibility for the Eclipse project. Dryden provided engineering, instrumentation, simulation, modification, maintenance, range support, and research pilots for the test program. The Air Force Flight Test Center (AFFTC), Edwards, California, supplied the C-141A transport aircraft and crew and configured the aircraft as needed for the tests. The AFFTC also provided the concept and detail design and analysis as well as hardware for the tow system and QF-106 modifications. Dryden performed the modifications to convert the QF-106 drone into the piloted EXD-01 (Eclipse eXperimental Demonstrator-01) experimental aircraft. Kelly Space & Technology hoped to use the results gleaned from the tow test in developing a series of low-cost, reusable launch vehicles. These tests demonstrated the validity of towing a delta-wing aircraft having high wing loading, validated the tow simulation model, and demonstrated various operational procedures, such as ground processing of in-flight maneuvers and emergency abort scenarios.

  19. Foot polydactyly and bipartite medial cuneiform: A case of co-occurrence in a Celtic skeleton from Verona (Italy).

    PubMed

    Laffranchi, Z; Martín Flórez, J S; Jiménez Brobeil, S A; Castellani, V

    2015-06-01

    We report a case of bilateral foot polydactyly and bipartite medial cuneiform in a male individual buried in a Celtic/Roman necropolis (3rd to 1st century BCE) in the city of Verona (Italy). During the construction of an underground garage in the main courtyard of the Bishop's Seminary at Verona between 2005 and 2010, archaeologists uncovered the remains of 174 individuals (108 non-adults and 66 adults). It is thought that these graves could belong to some of the first inhabitants of the urban area of Verona. The individual presented here (US 2807) is a middle-aged male (40-50 years) in a good state of preservation. His estimated stature is 1756 mm (± 32.1 mm). This male presents congenital anomalies in the feet and dental agenesis. We believe this to be the only known archaeological case of bilateral postaxial polydactyly with forked (Y) shape, in which both fifth metatarsals are associated with complete bipartition of the left medial cuneiform and partial bipartition of the right one. Polydactyly is fairly common in modern clinical cases but bipartite medial cuneiform is relatively rare; neither of these congenital conditions is well documented archaeologically.

  20. Distinct evolutionary histories of the DNA-A and DNA-B components of bipartite begomoviruses

    PubMed Central

    2010-01-01

    Background Viruses of the genus Begomovirus (family Geminiviridae) have genomes consisting of either one or two genomic components. The component of bipartite begomoviruses known as DNA-A is homologous to the genomes of all geminiviruses and encodes proteins required for replication, control of gene expression, overcoming host defenses, encapsidation and insect transmission. The second component, referred to as DNA-B, encodes two proteins with functions in intra- and intercellular movement in host plants. The origin of the DNA-B component remains unclear. The study described here was initiated to investigate the relationship between the DNA-A and DNA-B components of bipartite begomoviruses with a view to unraveling their evolutionary histories and providing information on the possible origin of the DNA-B component. Results Comparative phylogenetic and exhaustive pairwise sequence comparison of all DNA-A and DNA-B components of begomoviruses demonstrates that the two molecules have very distinct molecular evolutionary histories and likely are under very different evolutionary pressures. The analysis highlights that component exchange has played a far greater role in diversification of begomoviruses than previously suspected, although there are distinct differences in the apparent ability of different groups of viruses to utilize this "sexual" mechanism of genetic exchange. Additionally we explore the hypothesis that DNA-B originated as a satellite that was captured by the monopartite progenitor of all extant bipartite begomoviruses and subsequently evolved to become the integral (essential) genome component that we recognize today. The situation with present-day satellites associated with begomoviruses provides some clues to the processes and selection pressures that may have led to the "domestication" of a wild progenitor of the DNA-B component. Conclusions The analysis has highlighted the greater genetic variation of DNA-B components, in comparison to the DNA

  1. Quantum Discord and Entanglement of Quasi-Werner States Based on Bipartite Entangled Coherent States

    NASA Astrophysics Data System (ADS)

    Mishra, Manoj K.; Maurya, Ajay K.; Prakash, Hari

    2016-06-01

    Present work is an attempt to compare quantum discord and quantum entanglement of quasi-Werner states formed with the four bipartite entangled coherent states (ECS) used recently for quantum teleportation of a qubit encoded in superposed coherent state. Out of these, the quasi-Werner states based on maximally ECS due to its invariant nature under local operation is independent of measurement basis and mean photon numbers, while for quasi-Werner states based on non-maximally ECS, it depends upon measurement basis as well as on mean photon number. However, for large mean photon numbers since non-maximally ECS becomes almost maximally entangled therefore dependence of quantum discord for non-maximally ECS based quasi-Werner states on the measurement basis disappears.

  2. Modeling discrete combinatorial systems as alphabetic bipartite networks: Theory and applications

    NASA Astrophysics Data System (ADS)

    Choudhury, Monojit; Ganguly, Niloy; Maiti, Abyayananda; Mukherjee, Animesh; Brusch, Lutz; Deutsch, Andreas; Peruani, Fernando

    2010-03-01

    Genes and human languages are discrete combinatorial systems (DCSs), in which the basic building blocks are finite sets of elementary units: nucleotides or codons in a DNA sequence, and letters or words in a language. Different combinations of these finite units give rise to potentially infinite numbers of genes or sentences. This type of DCSs can be represented as an alphabetic bipartite network (ABN) where there are two kinds of nodes, one type represents the elementary units while the other type represents their combinations. Here, we extend and generalize recent analytical findings for ABNs derived in [Peruani , Europhys. Lett. 79, 28001 (2007)] and empirically investigate two real world systems in terms of ABNs, the codon gene and the phoneme-language network. The one-mode projections onto the elementary basic units are also studied theoretically as well as in real world ABNs. We propose the use of ABNs as a means for inferring the mechanisms underlying the growth of real world DCSs.

  3. Modeling discrete combinatorial systems as alphabetic bipartite networks: theory and applications.

    PubMed

    Choudhury, Monojit; Ganguly, Niloy; Maiti, Abyayananda; Mukherjee, Animesh; Brusch, Lutz; Deutsch, Andreas; Peruani, Fernando

    2010-03-01

    Genes and human languages are discrete combinatorial systems (DCSs), in which the basic building blocks are finite sets of elementary units: nucleotides or codons in a DNA sequence, and letters or words in a language. Different combinations of these finite units give rise to potentially infinite numbers of genes or sentences. This type of DCSs can be represented as an alphabetic bipartite network (ABN) where there are two kinds of nodes, one type represents the elementary units while the other type represents their combinations. Here, we extend and generalize recent analytical findings for ABNs derived in [Peruani, Europhys. Lett. 79, 28001 (2007)] and empirically investigate two real world systems in terms of ABNs, the codon gene and the phoneme-language network. The one-mode projections onto the elementary basic units are also studied theoretically as well as in real world ABNs. We propose the use of ABNs as a means for inferring the mechanisms underlying the growth of real world DCSs.

  4. Perfect state transfer by means of discrete-time quantum walk on complete bipartite graphs

    NASA Astrophysics Data System (ADS)

    Štefaňák, M.; Skoupý, S.

    2017-03-01

    We consider a quantum walk with two marked vertices, sender and receiver, and analyze its application to perfect state transfer on complete bipartite graphs. First, the situation with both the sender and the receiver vertex in the same part of the graph is considered. We show that in this case the dynamics of the quantum walk is independent of the size of the second part and reduces to the one for the star graph where perfect state transfer is achieved. Second, we consider the situation where the sender and the receiver vertex are in the opposite parts of the graph. In such a case, the state transfer with unit fidelity is achieved only when the parts have the same size.

  5. The aggregate path coupling method for the Potts model on bipartite graph

    NASA Astrophysics Data System (ADS)

    Hernández, José C.; Kovchegov, Yevgeniy; Otto, Peter T.

    2017-02-01

    In this paper, we derive the large deviation principle for the Potts model on the complete bipartite graph Kn,n as n increases to infinity. Next, for the Potts model on Kn,n, we provide an extension of the method of aggregate path coupling that was originally developed in the work of Kovchegov, Otto, and Titus [J. Stat. Phys. 144(5), 1009-1027 (2011)] for the mean-field Blume-Capel model and in Kovchegov and Otto [J. Stat. Phys. 161(3), 553-576 (2015)] for a general mean-field setting that included the generalized Curie-Weiss-Potts model analyzed in the work of Jahnel et al. [Markov Process. Relat. Fields 20, 601-632 (2014)]. We use the aggregate path coupling method to identify and determine the threshold value βs separating the rapid and slow mixing regimes for the Glauber dynamics of the Potts model on Kn,n.

  6. Advances in the Treatment of Syndromic Midface Hypoplasia Using Monobloc and Facial Bipartition Distraction Osteogenesis

    PubMed Central

    Kumar, Anand R.; Steinbacher, Derek

    2014-01-01

    Midface hypoplasia or retrusion remains a persistent feature of syndromic craniosynostosis years after successful treatment of the cranium. Although expansion of the cranial vault in infancy by traditional fronto-orbital advancement, posterior expansion, or both, can treat the immediate intracranial constriction, midface hypoplasia and its stigmata of exorbitism, sleep apnea, central face concavity, and malocclusion remain suboptimally treated. Initial enthusiasm for the procedures was tempered due to a high rate of infectious complications; timing and indications for surgery continue to stir controversy. During the last decade renewed interest with the monobloc and facial bipartition procedure using distraction osteogenesis with either an internal or external distraction system has decreased morbidity significantly. These procedures have re-emerged as powerful and comprehensive tools in the treatment of syndromic midface hypoplasia. PMID:26417208

  7. Time-reversal formalism applied to maximal bipartite entanglement: Theoretical and experimental exploration

    SciTech Connect

    Laforest, M.; Baugh, J.; Laflamme, R.

    2006-03-15

    Within the context of quantum teleportation, a proposed interpretation of bipartite entanglement describes teleportation as consisting of a qubit of information evolving along and against the flow of time of an external observer. We investigate the physicality of such a model by applying time reversal to the Schroedinger equation in the teleportation context. To do so, we first present the theory of time reversal applied to the circuit model. We then show that the outcome of a teleportationlike circuit is consistent with the usual tensor product treatment and is therefore independent of the physical quantum system used to encode the information. Finally, we illustrate these concepts with a proof-of-principle experiment on a liquid-state NMR quantum-information processor. The experimental results are consistent with the interpretation that information can be seen as flowing backward in time through entanglement.

  8. Tomato leaf curl New Delhi virus: a widespread bipartite begomovirus in the territory of monopartite begomoviruses.

    PubMed

    Zaidi, Syed Shan-E-Ali; Martin, Darren P; Amin, Imran; Farooq, Muhammad; Mansoor, Shahid

    2016-08-23

    Tomato leaf curl New Delhi virus (ToLCNDV) is an exceptional Old World bipartite begomovirus. On the Indian subcontinent, a region in which monopartite DNA satellite-associated begomoviruses with mostly narrow geographical ranges predominate, it is widespread, with a geographical range also including the Far East, Middle East, North Africa and Europe. The success of ToLCNDV probably derives from its broad host range and highly flexible genomic configuration: its DNA-A component is capable of productively interacting with, and trans-replicating, diverse DNA-B components and betasatellites. An understanding of the capacity of ToLCNDV to infect a variety of hosts and spread across a broad and ecologically variable geographical range could illuminate the potential economic threats associated with similar begomoviral invasions. Towards this end, we used available ToLCNDV sequences to reconstruct the history of ToLCNDV spread.

  9. Orchid fleck virus: an unclassified bipartite, negative-sense RNA plant virus.

    PubMed

    Peng, De Wei; Zheng, Guo Hua; Zheng, Zhi Zhong; Tong, Qing Xuan; Ming, Yan Lin

    2013-02-01

    Orchid fleck virus (OFV) causes chlorotic or necrotic spots in many orchid species. Its particle morphology and cytopathic effects are similar to those of nucleorhabdoviruses. Although OFV shares clear sequence similarities with rhabdoviruses, its taxonomic status is undetermined because its negative-sense RNA genome is bipartite. This review presents a general overview of classical and contemporary findings about etiology, serology, epidemiology, pathology, molecular biology, detection and prevention methods of orchid fleck virus. Because of the characteristics of OFV and viruses of the Rhabdoviridae and Mononegavirales, it is proposed that a new genus of negative-sense RNA plant viruses outside of the Mononegavirales be established with orchid fleck virus as the type species.

  10. Entanglement in bipartite pure states of an interacting boson gas obtained by local projective measurements

    SciTech Connect

    Paraan, Francis N. C.; Korepin, Vladimir E.; Molina-Vilaplana, Javier; Bose, Sougato

    2011-09-15

    We quantify the extractable entanglement of excited states of a Lieb-Liniger gas that are obtained from coarse-grained measurements on the ground state in which the boson number in one of two complementary contiguous partitions of the gas is determined. Numerically exact results obtained from the coordinate Bethe ansatz show that the von Neumann entropy of the resulting bipartite pure state increases monotonically with the strength of repulsive interactions and saturates to the impenetrable-boson limiting value. We also present evidence indicating that the largest amount of entanglement can be extracted from the most probable projected state having half the number of bosons in a given partition. Our study points to a fundamental difference between the nature of the entanglement in free-bosonic and free-fermionic systems, with the entanglement in the former being zero after projection, while that in the latter (corresponding to the impenetrable-boson limit) being nonzero.

  11. Cascading failures in bi-partite graphs: model for systemic risk propagation.

    PubMed

    Huang, Xuqing; Vodenska, Irena; Havlin, Shlomo; Stanley, H Eugene

    2013-01-01

    As economic entities become increasingly interconnected, a shock in a financial network can provoke significant cascading failures throughout the system. To study the systemic risk of financial systems, we create a bi-partite banking network model composed of banks and bank assets and propose a cascading failure model to describe the risk propagation process during crises. We empirically test the model with 2007 US commercial banks balance sheet data and compare the model prediction of the failed banks with the real failed banks after 2007. We find that our model efficiently identifies a significant portion of the actual failed banks reported by Federal Deposit Insurance Corporation. The results suggest that this model could be useful for systemic risk stress testing for financial systems. The model also identifies that commercial rather than residential real estate assets are major culprits for the failure of over 350 US commercial banks during 2008-2011.

  12. Cascading Failures in Bi-partite Graphs: Model for Systemic Risk Propagation

    PubMed Central

    Huang, Xuqing; Vodenska, Irena; Havlin, Shlomo; Stanley, H. Eugene

    2013-01-01

    As economic entities become increasingly interconnected, a shock in a financial network can provoke significant cascading failures throughout the system. To study the systemic risk of financial systems, we create a bi-partite banking network model composed of banks and bank assets and propose a cascading failure model to describe the risk propagation process during crises. We empirically test the model with 2007 US commercial banks balance sheet data and compare the model prediction of the failed banks with the real failed banks after 2007. We find that our model efficiently identifies a significant portion of the actual failed banks reported by Federal Deposit Insurance Corporation. The results suggest that this model could be useful for systemic risk stress testing for financial systems. The model also identifies that commercial rather than residential real estate assets are major culprits for the failure of over 350 US commercial banks during 2008–2011. PMID:23386974

  13. Stochastic thermodynamics of bipartite systems: transfer entropy inequalities and a Maxwell’s demon interpretation

    NASA Astrophysics Data System (ADS)

    Hartich, D.; Barato, A. C.; Seifert, U.

    2014-02-01

    We consider the stationary state of a Markov process on a bipartite system from the perspective of stochastic thermodynamics. One subsystem is used to extract work from a heat bath while being affected by the second subsystem. We show that the latter allows for a transparent and thermodynamically consistent interpretation of a Maxwell’s demon. Moreover, we obtain an integral fluctuation theorem involving the transfer entropy from one subsystem to the other. Comparing three different inequalities, we show that the entropy decrease of the first subsystem provides a tighter bound on the rate of extracted work than either the rate of transfer entropy from this subsystem to the demon or the heat dissipated through the dynamics of the demon. The latter two rates cannot be ordered by an inequality, as shown with the illustrative example of a four state system.

  14. Interlocking directorates in Irish companies using a latent space model for bipartite networks.

    PubMed

    Friel, Nial; Rastelli, Riccardo; Wyse, Jason; Raftery, Adrian E

    2016-06-14

    We analyze the temporal bipartite network of the leading Irish companies and their directors from 2003 to 2013, encompassing the end of the Celtic Tiger boom and the ensuing financial crisis in 2008. We focus on the evolution of company interlocks, whereby a company director simultaneously sits on two or more boards. We develop a statistical model for this dataset by embedding the positions of companies and directors in a latent space. The temporal evolution of the network is modeled through three levels of Markovian dependence: one on the model parameters, one on the companies' latent positions, and one on the edges themselves. The model is estimated using Bayesian inference. Our analysis reveals that the level of interlocking, as measured by a contraction of the latent space, increased before and during the crisis, reaching a peak in 2009, and has generally stabilized since then.

  15. Availability, functionality, and use of seat belts in Beijing taxis prior to the 2008 Beijing Olympic Games.

    PubMed

    Fleiter, Judy J; Gao, Liping; Qiu, Chen; Shi, Kan

    2009-03-01

    Use of driver seat belts and availability and functionality of passenger seat belts in a convenience sample of 231 Beijing taxis were examined in the months prior to the 2008 Beijing Olympic Games. Driver and front passenger seat belt use was mandated in China from 2004 to help address the growing public health crisis of road trauma. Results from observations made by in-vehicle passengers revealed that 21.2% of drivers were correctly wearing a belt, approximately half were not, and one third were using the belt in a non-functional way. Over 3/4 of this sample of taxi drivers were unrestrained while working. The percentage of functionally available belts was higher for front than rear passengers (88.3% and 22.9%, respectively). This low rate of belt availability in rear seats calls into question the preparedness of the fleet to cater for the safety needs of foreign visitors to China, particularly those from countries with high levels of restraint use. Factors influencing the use/misuse of seat belts in China remain largely unexplored. Results of this pilot study support further investigations of barriers to using injury prevention mechanisms such as seat belts in less motorised countries.

  16. Long driving time is associated with haematological markers of increased cardiovascular risk in taxi drivers

    PubMed Central

    Chen, J; Chen, Y; Chang, W; Christiani, D

    2005-01-01

    Aims: To examine the association between driving time and changes in haematological markers of increased risks for cardiovascular diseases (CVD). Methods: The authors conducted a cross sectional analysis of baseline data from the Taxi Drivers' Health Study cohort in Taipei, Taiwan. They retrieved information on comorbidity, laboratory tests, age, and anthropometric measures from medical records of 1157 subjects (mean age 44.6 (SD 8.6) years). Whole blood cell (WBC) count was used as the primary haematological marker for increased CVD risk, and platelet count and haematocrit as the secondary markers. Standardised questionnaires were implemented to collect information on demographics, lifestyle, work related physical and psychosocial factors, and driving time profiles. Multiple regression was used to estimate the adjusted effects of driving time on three haematological markers. Results: The mean measured hematological marker was 6656 (SD 1656) cells x106/l for WBC, 47.2 (SD 3.5) % for hematocrit, and 243 (SD 52) cells x109/l for platelets. The driving time was 264 (SD 76) hours/month. Compared with drivers who drove ⩽208 hours/month (1st quartile cut off), drivers who drove >208 hours/month had a higher WBC count (by 317 x106/l; 95% CI 99 to 535), haematocrit (by 0.8%; 95% CI 0.3 to 1.2), and platelets (7.9 x109/l; 95% CI 1.0 to 14.8). After adjusting for conventional CVD risk factors (age, sex, smoking, hypertension, diabetes, and hypercholesterolaemia), obesity, alcohol drinking, regular exercise, and sociodemographics (education, marital status, income, and so on), long driving time was still associated with significant increases in WBC and platelets, whereas the effect on haematocrit was diminished and became statistically non-significant. Additional controls for physical workload, self-perceived job stress, and job dissatisfaction did not alter the associations with increased WBC and platelets. Conclusions: Longitudinal studies are needed to confirm the

  17. PERFORMANCE AND DURABILITY OF THE PSA PEUGEOT CITROEN'S DPF SYSTEM ON A TAXI FLEET IN THE PARIS AREA

    SciTech Connect

    COROLLER, P; PLASSAT, G

    2003-08-24

    The use of Diesel engines has strongly increased during the last years and now represents 40% of the sales in Europe and up to 50% of the number of cars in circulation for some countries. This success is linked not only to the economical aspect of the use of such vehicles, but also to the recent technological improvements of these engines. The new technical solutions (high pressure direct injection, turbocharger) have indeed allowed the increase of these engine performances while decreasing their fuel consumption, pollutant emissions and noise level. From an environment point of view, Diesel engines are nevertheless penalized by their particulates and NOx emissions. The study and the treatment of the particulate, highly criticized for their potential impact on health, are the subject of numerous works of characterizations and developments. PSA Peugeot Citroen has recently (2000) launched its particulate filter technology on several types of vehicles (500,000 vehicles with DPF have been sold today). In order to evaluate the durability of this technology over a long period of time, a study program has been set-up by ADEME (French Environmental Agency), IFP Powertrain, PSA Peugeot Citroen and Taxis G7 (a Parisian taxis Company). The objective is to study the evolution of five taxis and their after-treatment system performances over 80,000km mileage--which corresponds to the recommended mileage before the first DPF maintenance--in hard urban driving conditions, as well over 120,000km, after the DPF maintenance and remanufacturing. More specifically, the following evaluations are being performed at regular intervals (around 20,000km): regulated gaseous pollutant emissions on NEDC cycle, particulate emissions and unregulated pollutant emissions. The results obtained until now have not shown any degradation of the particulate filter efficiency (more than 90%). This paper presents the methodology set-up, and the explanation of the first results obtained. Indeed, a more

  18. X-36 Tailless Fighter Agility Research Aircraft on lakebed during high-speed taxi tests

    NASA Technical Reports Server (NTRS)

    1996-01-01

    The NASA/McDonnell Douglas Corporation (MDC) X-36 Tailless Fighter Agility Research Aircraft undergoes high-speed taxi tests on Rogers Dry Lake at NASA Dryden Flight Research Center, Edwards, California, on October 17, 1996. The aircraft was tested at speeds up to 85 knots. Normal takeoff speed would be 110 knots. The NASA/Boeing X-36 Tailless Fighter Agility Research Aircraft program successfully demonstrated the tailless fighter design using advanced technologies to improve the maneuverability and survivability of possible future fighter aircraft. The program met or exceeded all project goals. For 31 flights during 1997 at the Dryden Flight Research Center, Edwards, California, the project team examined the aircraft's agility at low speed / high angles of attack and at high speed / low angles of attack. The aircraft's speed envelope reached up to 206 knots (234 mph). This aircraft was very stable and maneuverable. It handled very well. The X-36 vehicle was designed to fly without the traditional tail surfaces common on most aircraft. Instead, a canard forward of the wing was used as well as split ailerons and an advanced thrust-vectoring nozzle for directional control. The X-36 was unstable in both pitch and yaw axes, so an advanced, single-channel digital fly-by-wire control system (developed with some commercially available components) was put in place to stabilize the aircraft. Using a video camera mounted in the nose of the aircraft and an onboard microphone, the X-36 was remotely controlled by a pilot in a ground station virtual cockpit. A standard fighter-type head-up display (HUD) and a moving-map representation of the vehicle's position within the range in which it flew provided excellent situational awareness for the pilot. This pilot-in-the-loop approach eliminated the need for expensive and complex autonomous flight control systems and the risks associated with their inability to deal with unknown or unforeseen phenomena in flight. Fully fueled the X

  19. On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types

    PubMed Central

    2014-01-01

    Background Integrating and analyzing heterogeneous genome-scale data is a huge algorithmic challenge for modern systems biology. Bipartite graphs can be useful for representing relationships across pairs of disparate data types, with the interpretation of these relationships accomplished through an enumeration of maximal bicliques. Most previously-known techniques are generally ill-suited to this foundational task, because they are relatively inefficient and without effective scaling. In this paper, a powerful new algorithm is described that produces all maximal bicliques in a bipartite graph. Unlike most previous approaches, the new method neither places undue restrictions on its input nor inflates the problem size. Efficiency is achieved through an innovative exploitation of bipartite graph structure, and through computational reductions that rapidly eliminate non-maximal candidates from the search space. An iterative selection of vertices for consideration based on non-decreasing common neighborhood sizes boosts efficiency and leads to more balanced recursion trees. Results The new technique is implemented and compared to previously published approaches from graph theory and data mining. Formal time and space bounds are derived. Experiments are performed on both random graphs and graphs constructed from functional genomics data. It is shown that the new method substantially outperforms the best previous alternatives. Conclusions The new method is streamlined, efficient, and particularly well-suited to the study of huge and diverse biological data. A robust implementation has been incorporated into GeneWeaver, an online tool for integrating and analyzing functional genomics experiments, available at http://geneweaver.org. The enormous increase in scalability it provides empowers users to study complex and previously unassailable gene-set associations between genes and their biological functions in a hierarchical fashion and on a genome-wide scale. This practical

  20. A bipartite operator interacts with a heat shock element to mediate early meiotic induction of Saccharomyces cerevisiae HSP82

    SciTech Connect

    Szent-Gyorgyi, C.

    1995-12-01

    This report seeks to characterize the activation of meiotic gene in terms of cis-acting DNA elements and their associated factors in Saccharomyces cerevisiae. It was found that vegetative repression and meiotic induction depend on interactions of the promoter-proximal heat shock element with a nearby bipartite repression element. The experiments described explore how two different regulatory pathways induce transcription by stimulating a single classical activation element, a nonspecific heat shock element. 81 refs., 10 figs., 1 tab.

  1. Half-soliton interaction of population taxis waves in predator-prey systems with pursuit and evasion.

    PubMed

    Tsyganov, M A; Biktashev, V N

    2004-09-01

    In this paper, we use numerical simulations to demonstrate a half-soliton interaction of waves in a mathematical model of a "prey-predator" system with taxis when of two colliding waves, one annihilates and the other continues to propagate. We show that this effect depends on the "ages" or, equivalently, "widths" of the colliding waves. In two spatial dimensions we demonstrate that the type of interaction, i.e., annihilation, quasisoliton, or half-soliton, depends not only on curvature and width of the colliding waves, but also on the angle of the collision. When conditions of collision are varying in such a way that only a part of a wave survives the collision, then "taxitons," compact pieces of solitary waves, may form, which can exist for a significant time.

  2. Nuclear Localization of the DNA Repair Scaffold XRCC1: Uncovering the Functional Role of a Bipartite NLS.

    PubMed

    Kirby, Thomas W; Gassman, Natalie R; Smith, Cassandra E; Pedersen, Lars C; Gabel, Scott A; Sobhany, Mack; Wilson, Samuel H; London, Robert E

    2015-08-25

    We have characterized the nuclear localization signal (NLS) of XRCC1 structurally using X-ray crystallography and functionally using fluorescence imaging. Crystallography and binding studies confirm the bipartite nature of the XRCC1 NLS interaction with Importin α (Impα) in which the major and minor binding motifs are separated by >20 residues, and resolve previous inconsistent determinations. Binding studies of peptides corresponding to the bipartite NLS, as well as its major and minor binding motifs, to both wild-type and mutated forms of Impα reveal pronounced cooperative binding behavior that is generated by the proximity effect of the tethered major and minor motifs of the NLS. The cooperativity stems from the increased local concentration of the second motif near its cognate binding site that is a consequence of the stepwise binding behavior of the bipartite NLS. We predict that the stepwise dissociation of the NLS from Impα facilitates unloading by providing a partially complexed intermediate that is available for competitive binding by Nup50 or the Importin β binding domain. This behavior provides a basis for meeting the intrinsically conflicting high affinity and high flux requirements of an efficient nuclear transport system.

  3. Nuclear localization of the DNA repair scaffold XRCC1: Uncovering the functional role of a bipartite NLS

    DOE PAGES

    Kirby, Thomas W.; Gassman, Natalie R.; Smith, Cassandra E.; ...

    2015-08-25

    We have characterized the nuclear localization signal (NLS) of XRCC1 structurally using X-ray crystallography and functionally using fluorescence imaging. Crystallography and binding studies confirm the bipartite nature of the XRCC1 NLS interaction with Importin α (Impα) in which the major and minor binding motifs are separated by >20 residues, and resolve previous inconsistent determinations. Binding studies of peptides corresponding to the bipartite NLS, as well as its major and minor binding motifs, to both wild-type and mutated forms of Impα reveal pronounced cooperative binding behavior that is generated by the proximity effect of the tethered major and minor motifs ofmore » the NLS. The cooperativity stems from the increased local concentration of the second motif near its cognate binding site that is a consequence of the stepwise binding behavior of the bipartite NLS. We predict that the stepwise dissociation of the NLS from Impα facilitates unloading by providing a partially complexed intermediate that is available for competitive binding by Nup50 or the Importin β binding domain. This behavior gives a basis for meeting the intrinsically conflicting high affinity and high flux requirements of an efficient nuclear transport system.« less

  4. Nuclear localization of the DNA repair scaffold XRCC1: Uncovering the functional role of a bipartite NLS

    SciTech Connect

    Kirby, Thomas W.; Gassman, Natalie R.; Smith, Cassandra E.; Pedersen, Lars C.; Gabel, Scott A.; Sobhany, Mack; Wilson, Samuel H.; London, Robert E.

    2015-08-25

    We have characterized the nuclear localization signal (NLS) of XRCC1 structurally using X-ray crystallography and functionally using fluorescence imaging. Crystallography and binding studies confirm the bipartite nature of the XRCC1 NLS interaction with Importin α (Impα) in which the major and minor binding motifs are separated by >20 residues, and resolve previous inconsistent determinations. Binding studies of peptides corresponding to the bipartite NLS, as well as its major and minor binding motifs, to both wild-type and mutated forms of Impα reveal pronounced cooperative binding behavior that is generated by the proximity effect of the tethered major and minor motifs of the NLS. The cooperativity stems from the increased local concentration of the second motif near its cognate binding site that is a consequence of the stepwise binding behavior of the bipartite NLS. We predict that the stepwise dissociation of the NLS from Impα facilitates unloading by providing a partially complexed intermediate that is available for competitive binding by Nup50 or the Importin β binding domain. This behavior gives a basis for meeting the intrinsically conflicting high affinity and high flux requirements of an efficient nuclear transport system.

  5. Lévy-taxis: a novel search strategy for finding odor plumes in turbulent flow-dominated environments

    NASA Astrophysics Data System (ADS)

    Pasternak, Zohar; Bartumeus, Frederic; Grasso, Frank W.

    2009-10-01

    Locating chemical plumes in aquatic or terrestrial environments is important for many economic, conservation, security and health related human activities. The localization process is composed mainly of two phases: finding the chemical plume and then tracking it to its source. Plume tracking has been the subject of considerable study whereas plume finding has received little attention. We address here the latter issue, where the searching agent must find the plume in a region often many times larger than the plume and devoid of the relevant chemical cues. The probability of detecting the plume not only depends on the movements of the searching agent but also on the fluid mechanical regime, shaping plume intermittency in space and time; this is a basic, general problem when exploring for ephemeral resources (e.g. moving and/or concealing targets). Here we present a bio-inspired search strategy named Lévy-taxis that, under certain conditions, located odor plumes significantly faster and with a better success rate than other search strategies such as Lévy walks (LW), correlated random walks (CRW) and systematic zig-zag. These results are based on computer simulations which contain, for the first time ever, digitalized real-world water flow and chemical plume instead of their theoretical model approximations. Combining elements of LW and CRW, Lévy-taxis is particularly efficient for searching in flow-dominated environments: it adaptively controls the stochastic search pattern using environmental information (i.e. flow) that is available throughout the course of the search and shows correlation with the source providing the cues. This strategy finds natural application in real-world search missions, both by humans and autonomous robots, since it accomodates the stochastic nature of chemical mixing in turbulent flows. In addition, it may prove useful in the field of behavioral ecology, explaining and predicting the movement patterns of various animals searching for

  6. Cluster Analysis of Weighted Bipartite Networks: A New Copula-Based Approach

    PubMed Central

    Chessa, Alessandro; Crimaldi, Irene; Riccaboni, Massimo; Trapin, Luca

    2014-01-01

    In this work we are interested in identifying clusters of “positional equivalent” actors, i.e. actors who play a similar role in a system. In particular, we analyze weighted bipartite networks that describes the relationships between actors on one side and features or traits on the other, together with the intensity level to which actors show their features. We develop a methodological approach that takes into account the underlying multivariate dependence among groups of actors. The idea is that positions in a network could be defined on the basis of the similar intensity levels that the actors exhibit in expressing some features, instead of just considering relationships that actors hold with each others. Moreover, we propose a new clustering procedure that exploits the potentiality of copula functions, a mathematical instrument for the modelization of the stochastic dependence structure. Our clustering algorithm can be applied both to binary and real-valued matrices. We validate it with simulations and applications to real-world data. PMID:25303095

  7. Complete nucleotide sequences of a distinct bipartite begomovirus, bitter gourd yellow vein virus, infecting Momordica charantia.

    PubMed

    Tahir, Muhammad; Haider, Muhammad Saleem; Briddon, Rob W

    2010-11-01

    Momordica charantia (Cucurbitaceae), a vegetable crop commonly cultivated throughout Pakistan, and begomoviruses, a serious threat to crop plants, are natives of tropical and subtropical regions of the world. Leaf samples of M. charantia with yellow vein symptoms typical of begomovirus infections and samples from apparently healthy plants were collected from areas around Lahore in 2004. Full-length clones of a bipartite begomovirus were isolated from symptomatic samples. The complete nucleotide sequences of the components of one isolate were determined, and these showed the arrangement of genes typical of Old World begomoviruses. The complete nucleotides sequence of DNA A showed the highest nucleotide sequence identity (86.9%) to an isolate of Tomato leaf curl New Delhi virus (ToLCNDV), confirming it to belong to a distinct species of begomovirus, for which the name Bitter gourd yellow vein virus (BGYVV) is proposed. Sequence comparisons showed that BGYVV likely emerged as a result of inter-specific recombination between ToLCNDV and tomato leaf curl Bangladesh virus (ToLCBDV). The complete nucleotide sequence of DNA B showed 97.2% nucleotide sequence identity to that of an Indian strain of Squash leaf curl China virus.

  8. Fibrinogen {alpha} genes: Conservation of bipartite transcripts and carboxy-terminal-extended {alpha} subunits in vertebrates

    SciTech Connect

    Fu, Y.; Cao, Y.; Hertzberg, K.M.; Grieninger, G.

    1995-11-01

    All three well-studied subunits of the clotting protein fibrinogen ({alpha}, {beta}, {gamma}) share N-terminal structural homologies, but until recently only the {beta} and {gamma} chains were recognized as having similar globular C-termini. With the discovery of an extra exon in the human fibrinogen {alpha} gene (exon VI), a minor form of the {alpha} subunit ({alpha}{sub E}) with an extended {beta}- and {gamma}-like C-terminus has been identified. In the present study, the polymerase chain reaction has been used to identify sequences that encode counterparts to {alpha}{sub E} in chicken, rabbit, rat, and baboon. The basic six-exon structure of the fibrinogen {alpha} genes is shown to be conserved among mammals and birds, as are the intron positions. Bipartite transcripts - still bearing an intron prior to the last exon - are found among the products of the various vertebrate fibrinogen {alpha} genes. The last exon represents the largest conserved segment of the gene and, in each species examined, encodes exactly 236 amino acids. The C-termini of these {alpha}{sub E} chains align without a single gap and are between 76 and 99% identical. Since the exon VI-encoded domain of {alpha}{sub E} is as well conserved as the corresponding regions of the {beta} and {gamma} chains, it follows that it is equally important and that {alpha}{sub E}-fibrinogen plays a vital, if as-yet unrecognized physiological role. 21 refs., 7 figs., 1 tab.

  9. Bank-Firm Credit Network in Japan: An Analysis of a Bipartite Network

    PubMed Central

    Marotta, Luca; Miccichè, Salvatore; Fujiwara, Yoshi; Iyetomi, Hiroshi; Aoyama, Hideaki; Gallegati, Mauro; Mantegna, Rosario N.

    2015-01-01

    We investigate the networked nature of the Japanese credit market. Our investigation is performed with tools of network science. In our investigation we perform community detection with an algorithm which is identifying communities composed of both banks and firms. We show that the communities obtained by directly working on the bipartite network carry information about the networked nature of the Japanese credit market. Our analysis is performed for each calendar year during the time period from 1980 to 2011. To investigate the time evolution of the networked structure of the credit market we introduce a new statistical method to track the time evolution of detected communities. We then characterize the time evolution of communities by detecting for each time evolving set of communities the over-expression of attributes of firms and banks. Specifically, we consider as attributes the economic sector and the geographical location of firms and the type of banks. In our 32-year-long analysis we detect a persistence of the over-expression of attributes of communities of banks and firms together with a slow dynamic of changes from some specific attributes to new ones. Our empirical observations show that the credit market in Japan is a networked market where the type of banks, geographical location of firms and banks, and economic sector of the firm play a role in shaping the credit relationships between banks and firms. PMID:25933413

  10. Bipartite Network Analysis of the Archaeal Virosphere: Evolutionary Connections between Viruses and Capsidless Mobile Elements.

    PubMed

    Iranzo, Jaime; Koonin, Eugene V; Prangishvili, David; Krupovic, Mart

    2016-12-15

    Archaea and particularly hyperthermophilic crenarchaea are hosts to many unusual viruses with diverse virion shapes and distinct gene compositions. As is typical of viruses in general, there are no universal genes in the archaeal virosphere. Therefore, to obtain a comprehensive picture of the evolutionary relationships between viruses, network analysis methods are more productive than traditional phylogenetic approaches. Here we present a comprehensive comparative analysis of genomes and proteomes from all currently known taxonomically classified and unclassified, cultivated and uncultivated archaeal viruses. We constructed a bipartite network of archaeal viruses that includes two classes of nodes, the genomes and gene families that connect them. Dissection of this network using formal community detection methods reveals strong modularity, with 10 distinct modules and 3 putative supermodules. However, compared to similar previously analyzed networks of eukaryotic and bacterial viruses, the archaeal virus network is sparsely connected. With the exception of the tailed viruses related to bacteriophages of the order Caudovirales and the families Turriviridae and Sphaerolipoviridae that are linked to a distinct supermodule of eukaryotic and bacterial viruses, there are few connector genes shared by different archaeal virus modules. In contrast, most of these modules include, in addition to viruses, capsidless mobile elements, emphasizing tight evolutionary connections between the two types of entities in archaea. The relative contributions of distinct evolutionary origins, in particular from nonviral elements, and insufficient sampling to the sparsity of the archaeal virus network remain to be determined by further exploration of the archaeal virosphere.

  11. Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix.

    PubMed

    Brown, Jessica A; Bulkley, David; Wang, Jimin; Valenstein, Max L; Yario, Therese A; Steitz, Thomas A; Steitz, Joan A

    2014-07-01

    Metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) is a highly abundant nuclear long noncoding RNA that promotes malignancy. A 3'-stem-loop structure is predicted to confer stability by engaging a downstream A-rich tract in a triple helix, similar to the expression and nuclear retention element (ENE) from the KSHV polyadenylated nuclear RNA. The 3.1-Å-resolution crystal structure of the human MALAT1 ENE and A-rich tract reveals a bipartite triple helix containing stacks of five and four U•A-U triples separated by a C+•G-C triplet and C-G doublet, extended by two A-minor interactions. In vivo decay assays indicate that this blunt-ended triple helix, with the 3' nucleotide in a U•A-U triple, inhibits rapid nuclear RNA decay. Interruption of the triple helix by the C-G doublet induces a 'helical reset' that explains why triple-helical stacks longer than six do not occur in nature.

  12. Structure of multiphoton quantum optics. II. Bipartite systems, physical processes, and heterodyne squeezed states

    NASA Astrophysics Data System (ADS)

    dell'Anno, Fabio; de Siena, Silvio; Illuminati, Fabrizio

    2004-03-01

    Extending the scheme developed for a single mode of the electromagnetic field in the preceding paper [

    F. Dell’Anno, S. De Siena, and F. Illuminati, Phys. Rev. A 69, 033812 (2004)
    ], we introduce two-mode nonlinear canonical transformations depending on two heterodyne mixing angles. They are defined in terms of Hermitian nonlinear functions that realize heterodyne superpositions of conjugate quadratures of bipartite systems. The canonical transformations diagonalize a class of Hamiltonians describing nondegenerate and degenerate multiphoton processes. We determine the coherent states associated with the canonical transformations, which generalize the nondegenerate two-photon squeezed states. Such heterodyne multiphoton squeezed states are defined as the simultaneous eigenstates of the transformed, coupled annihilation operators. They are generated by nonlinear unitary evolutions acting on two-mode squeezed states. They are non-Gaussian, highly nonclassical, entangled states. For a quadratic nonlinearity the heterodyne multiphoton squeezed states define two-mode cubic phase states. The statistical properties of these states can be widely adjusted by tuning the heterodyne mixing angles, the phases of the nonlinear couplings, as well as the strength of the nonlinearity. For quadratic nonlinearity, we study the higher-order contributions to the susceptibility in nonlinear media and we suggest possible experimental realizations of multiphoton conversion processes generating the cubic-phase heterodyne squeezed states.

  13. Reaction factoring and bipartite update graphs accelerate the Gillespie Algorithm for large-scale biochemical systems.

    PubMed

    Indurkhya, Sagar; Beal, Jacob

    2010-01-06

    ODE simulations of chemical systems perform poorly when some of the species have extremely low concentrations. Stochastic simulation methods, which can handle this case, have been impractical for large systems due to computational complexity. We observe, however, that when modeling complex biological systems: (1) a small number of reactions tend to occur a disproportionately large percentage of the time, and (2) a small number of species tend to participate in a disproportionately large percentage of reactions. We exploit these properties in LOLCAT Method, a new implementation of the Gillespie Algorithm. First, factoring reaction propensities allows many propensities dependent on a single species to be updated in a single operation. Second, representing dependencies between reactions with a bipartite graph of reactions and species requires only storage for reactions, rather than the required for a graph that includes only reactions. Together, these improvements allow our implementation of LOLCAT Method to execute orders of magnitude faster than currently existing Gillespie Algorithm variants when simulating several yeast MAPK cascade models.

  14. Molecular characterization of distinct bipartite begomovirus infecting bhendi (Abelmoschus esculentus L.) in India.

    PubMed

    Venkataravanappa, V; Lakshminarayana Reddy, C N; Jalali, Salil; Krishna Reddy, M

    2012-06-01

    Yellow vein mosaic disease of okra is a whitefly transmitted begomovirus causing heavy economic loss in different parts of India. The okra isolate (OY131) of this virus from a bhendi plant [(Abelmoschus esculentus L.) Moench] showing yellow vein mosaic, vein twisting, reduced leaves, and a bushy appearance in the Palem region, New Delhi, India, was characterized in the present study. The complete DNA-A and DNA-B sequences have been determined and are comprised of 2,746 and 2,703 nucleotides, respectively. The betasatellite (DNA-β) component was absent in the sample. The genome organization was typically of biparite begomoviruses, which were characterized earlier. Comparison of DNA-A component with other known begomoviruses suggest that this virus, being only distantly related (<85.9% similarity with its nearest relative, BYVMV) to other known begomoviruses, is a new species. We have tentatively assigned the genome to a novel geminivirus species Bhendi yellow vein mosaic Delhi virus [BYVDV-IN (India: Delhi: okra)]. DNA-B showed highest sequence identity (87.8% identical) to that of a ToLCNDV (AY158080). The phylogenetic analysis of the present isolate is distinct from all other viruses; however clusters with ToLCNDV group infect different crops. The recombination analysis revealed that this isolate has sequences originated from ToLCNDV. This is the first known bhendi yellow vein mosaic disease associated bipartite begomovirus from India.

  15. Electronic correlations in the Hubbard model on a bi-partite lattice

    NASA Astrophysics Data System (ADS)

    Ameen, Wissam A.; Walet, Niels R.; Xian, Yang

    2017-03-01

    In this work we study the Hubbard model on a bi-partite lattice using the coupled-cluster method (CCM). We first investigate how to implement this approach in order to reproduce the lack of magnetic order in the 1D model, as predicted by the exact Bethe-Ansatz solution. This result can only be reproduced if we include an algebraic correlation in some of the coupled-cluster model coefficients. Using the correspondence between the Heisenberg model and the Hubbard model in the large-coupling limit, we use very accurate results for the CCM applied to the Heisenberg and its generalisation, the XXZ model, to determine CCM coefficients with the correct properties. Using the same approach we then study the 2D Hubbard model on a square and a honeycomb lattice, both of which can be thought of as simplified models of real 2D materials. We analyse the charge and spin excitations, and show that with care we can obtain good results.

  16. Wnt-Mediated Repression via Bipartite DNA Recognition by TCF in the Drosophila Hematopoietic System

    PubMed Central

    Zhang, Chen U.; Blauwkamp, Timothy A.; Burby, Peter E.; Cadigan, Ken M.

    2014-01-01

    The Wnt/β-catenin signaling pathway plays many important roles in animal development, tissue homeostasis and human disease. Transcription factors of the TCF family mediate many Wnt transcriptional responses, promoting signal-dependent activation or repression of target gene expression. The mechanism of this specificity is poorly understood. Previously, we demonstrated that for activated targets in Drosophila, TCF/Pangolin (the fly TCF) recognizes regulatory DNA through two DNA binding domains, with the High Mobility Group (HMG) domain binding HMG sites and the adjacent C-clamp domain binding Helper sites. Here, we report that TCF/Pangolin utilizes a similar bipartite mechanism to recognize and regulate several Wnt-repressed targets, but through HMG and Helper sites whose sequences are distinct from those found in activated targets. The type of HMG and Helper sites is sufficient to direct activation or repression of Wnt regulated cis-regulatory modules, and protease digestion studies suggest that TCF/Pangolin adopts distinct conformations when bound to either HMG-Helper site pair. This repressive mechanism occurs in the fly lymph gland, the larval hematopoietic organ, where Wnt/β-catenin signaling controls prohemocytic differentiation. Our study provides a paradigm for direct repression of target gene expression by Wnt/β-catenin signaling and allosteric regulation of a transcription factor by DNA. PMID:25144371

  17. Wnt-mediated repression via bipartite DNA recognition by TCF in the Drosophila hematopoietic system.

    PubMed

    Zhang, Chen U; Blauwkamp, Timothy A; Burby, Peter E; Cadigan, Ken M

    2014-08-01

    The Wnt/β-catenin signaling pathway plays many important roles in animal development, tissue homeostasis and human disease. Transcription factors of the TCF family mediate many Wnt transcriptional responses, promoting signal-dependent activation or repression of target gene expression. The mechanism of this specificity is poorly understood. Previously, we demonstrated that for activated targets in Drosophila, TCF/Pangolin (the fly TCF) recognizes regulatory DNA through two DNA binding domains, with the High Mobility Group (HMG) domain binding HMG sites and the adjacent C-clamp domain binding Helper sites. Here, we report that TCF/Pangolin utilizes a similar bipartite mechanism to recognize and regulate several Wnt-repressed targets, but through HMG and Helper sites whose sequences are distinct from those found in activated targets. The type of HMG and Helper sites is sufficient to direct activation or repression of Wnt regulated cis-regulatory modules, and protease digestion studies suggest that TCF/Pangolin adopts distinct conformations when bound to either HMG-Helper site pair. This repressive mechanism occurs in the fly lymph gland, the larval hematopoietic organ, where Wnt/β-catenin signaling controls prohemocytic differentiation. Our study provides a paradigm for direct repression of target gene expression by Wnt/β-catenin signaling and allosteric regulation of a transcription factor by DNA.

  18. Role of betasatellite in the pathogenesis of a bipartite begomovirus affecting tomato in India.

    PubMed

    Sivalingam, P N; Varma, Anupam

    2012-06-01

    Betasatellites are commonly associated with tomato leaf curl disease caused by begomoviruses in India. This study demonstrates the role of a betasatellite in the pathogenesis of tomato leaf curl New Delhi virus (ToLCNDV), a bipartite begomovirus affecting tomato in India. For infection, accumulation, systemic movement and disease induction by ToLCNDV, co-infection by the associated betasatellite was not essential, as the DNA A alone of ToLCNDV could infect tomato and Nicotiana benthamiana and induce mild symptoms, but DNA B or Cotton leaf curl Multan betasatellite (CLCuMB) was required for development of typical leaf curl symptoms. The symptoms were most severe in plants infected with all three components, indicating a role of the betasatellite in the pathogenesis of ToLCNDV. The plants infected with ToLCNDV DNA A alone had limited accumulation of viral DNA, which increased by many times in plants co-infected with DNA B or/and betasatellite. However, the plants infected with all three components accumulated 20 times less betasatellite DNA than the plants infected with DNA A and betasatellite. The increase in the amount of viral DNAs was also reflected in the commensurate increase in symptom severity and transmissibility by whitefly, Bemisia tabaci.

  19. Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix

    PubMed Central

    Brown, Jessica A.; Bulkley, David; Wang, Jimin; Valenstein, Max L.; Yario, Therese A.; Steitz, Thomas A.; Steitz, Joan A.

    2014-01-01

    Metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) is a highly-abundant nuclear long noncoding RNA that promotes malignancy. A 3′-stem-loop structure is predicted to confer stability by engaging a downstream A-rich tract in a triple helix, similar to the expression and nuclear retention element (ENE) from the KSHV polyadenylated nuclear RNA. The 3.1-Å resolution crystal structure of the human MALAT1 ENE and A-rich tract reveals a bipartite triple helix containing stacks of five and four U•A-U triples separated by a C+•G-C triplet and C-G doublet, extended by two A-minor interactions. In vivo decay assays indicate that this blunt-ended triple helix, with the 3′ nucleotide in a U•A-U triple, inhibits rapid nuclear RNA decay. Interruption of the triple helix by the C-G doublet induces a “helical reset” that explains why triple-helical stacks longer than six do not occur in nature. PMID:24952594

  20. A bipartite signal regulates the faithful delivery of apical domain marker podocalyxin/Gp135.

    PubMed

    Yu, Chun-Ying; Chen, Jen-Yau; Lin, Yu-Yu; Shen, Kuo-Fang; Lin, Wei-Ling; Chien, Chung-Liang; ter Beest, Martin B A; Jou, Tzuu-Shuh

    2007-05-01

    Podocalyxin/Gp135 was recently demonstrated to participate in the formation of a preapical complex to set up initial polarity in MDCK cells, a function presumably depending on the apical targeting of Gp135. We show that correct apical sorting of Gp135 depends on a bipartite signal composed of an extracellular O-glycosylation-rich region and the intracellular PDZ domain-binding motif. The function of this PDZ-binding motif could be substituted with a fusion construct of Gp135 with Ezrin-binding phosphoprotein 50 (EBP50). In accordance with this observation, EBP50 binds to newly synthesized Gp135 at the Golgi apparatus and facilitates oligomerization and sorting of Gp135 into a clustering complex. A defective connection between Gp135 and EBP50 or EBP50 knockdown results in a delayed exit from the detergent-resistant microdomain, failure of oligomerization, and basolateral missorting of Gp135. Furthermore, the basolaterally missorted EBP50-binding defective mutant of Gp135 was rapidly retrieved via a PKC-dependent mechanism. According to these findings, we propose a model by which a highly negative charged transmembrane protein could be packed into an apical sorting platform with the aid of its cytoplasmic partner EBP50.

  1. Integration of Phenotypic Metadata and Protein Similarity in Archaea Using a Spectral Bipartitioning Approach

    SciTech Connect

    Hooper, Sean D.; Anderson, Iain J; Pati, Amrita; Dalevi, Daniel; Mavromatis, Konstantinos; Kyrpides, Nikos C

    2009-01-01

    In order to simplify and meaningfully categorize large sets of protein sequence data, it is commonplace to cluster proteins based on the similarity of those sequences. However, it quickly becomes clear that the sequence flexibility allowed a given protein varies significantly among different protein families. The degree to which sequences are conserved not only differs for each protein family, but also is affected by the phylogenetic divergence of the source organisms. Clustering techniques that use similarity thresholds for protein families do not always allow for these variations and thus cannot be confidently used for applications such as automated annotation and phylogenetic profiling. In this work, we applied a spectral bipartitioning technique to all proteins from 53 archaeal genomes. Comparisons between different taxonomic levels allowed us to study the effects of phylogenetic distances on cluster structure. Likewise, by associating functional annotations and phenotypic metadata with each protein, we could compare our protein similarity clusters with both protein function and associated phenotype. Our clusters can be analyzed graphically and interactively online.

  2. Matched Bipartite Digraph Representation of Generalized Dynamical System Formed by One-way Barriers

    NASA Astrophysics Data System (ADS)

    Li, John; Mahoney, John; Mitchell, Kevin; Tom Solomon Collaboration

    2014-03-01

    We studied a dynamical system with stable and unstable manifolds that behave as one-way barriers, instead of separatrices in traditional dynamical system that are two-way barriers. This asymmetry gives rise to a richer dynamical behavior such as the overlapping of basins of attraction. The recently developed Burning Invariant Manifold (BIM) theory took a dynamical system approach to understand front propagation in Advection-Reaction-Diffusion systems, which have BIMs as the one-way barriers. Through numerical simulations under BIM theory, we found that although both unstable and stable BIMs are one-way barriers, unstable BIMs are the ones that we can experimentally observe the fronts converging onto, and the stable BIMs act as the basin boundaries. We further hypothesized a duality relation between the stable and unstable BIMs. Under the duality hypothesis, we developed a mechanism of the behavior of the system by reducing it back to a traditional system based on topology, and we found a simplification of the system by to summarize the topological information into a Matched Bipartite directed graph (MB digraph). This work was supported by the US National Science Foundation under grant PHY-0748828 and NSF Fellowship DGE-0937362.

  3. Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach

    PubMed Central

    Hooper, Sean D.; Anderson, Iain J.; Pati, Amrita; Dalevi, Daniel; Mavromatis, Konstantinos; Kyrpides, Nikos C.

    2009-01-01

    In order to simplify and meaningfully categorize large sets of protein sequence data, it is commonplace to cluster proteins based on the similarity of those sequences. However, it quickly becomes clear that the sequence flexibility allowed a given protein varies significantly among different protein families. The degree to which sequences are conserved not only differs for each protein family, but also is affected by the phylogenetic divergence of the source organisms. Clustering techniques that use similarity thresholds for protein families do not always allow for these variations and thus cannot be confidently used for applications such as automated annotation and phylogenetic profiling. In this work, we applied a spectral bipartitioning technique to all proteins from 53 archaeal genomes. Comparisons between different taxonomic levels allowed us to study the effects of phylogenetic distances on cluster structure. Likewise, by associating functional annotations and phenotypic metadata with each protein, we could compare our protein similarity clusters with both protein function and associated phenotype. Our clusters can be analyzed graphically and interactively online. PMID:19223325

  4. Bank-firm credit network in Japan: an analysis of a bipartite network.

    PubMed

    Marotta, Luca; Miccichè, Salvatore; Fujiwara, Yoshi; Iyetomi, Hiroshi; Aoyama, Hideaki; Gallegati, Mauro; Mantegna, Rosario N

    2015-01-01

    We investigate the networked nature of the Japanese credit market. Our investigation is performed with tools of network science. In our investigation we perform community detection with an algorithm which is identifying communities composed of both banks and firms. We show that the communities obtained by directly working on the bipartite network carry information about the networked nature of the Japanese credit market. Our analysis is performed for each calendar year during the time period from 1980 to 2011. To investigate the time evolution of the networked structure of the credit market we introduce a new statistical method to track the time evolution of detected communities. We then characterize the time evolution of communities by detecting for each time evolving set of communities the over-expression of attributes of firms and banks. Specifically, we consider as attributes the economic sector and the geographical location of firms and the type of banks. In our 32-year-long analysis we detect a persistence of the over-expression of attributes of communities of banks and firms together with a slow dynamic of changes from some specific attributes to new ones. Our empirical observations show that the credit market in Japan is a networked market where the type of banks, geographical location of firms and banks, and economic sector of the firm play a role in shaping the credit relationships between banks and firms.

  5. Algebraic and group structure for bipartite anisotropic Ising model on a non-local basis

    NASA Astrophysics Data System (ADS)

    Delgado, Francisco

    2015-01-01

    Entanglement is considered a basic physical resource for modern quantum applications as Quantum Information and Quantum Computation. Interactions based on specific physical systems able to generate and sustain entanglement are subject to deep research to get understanding and control on it. Atoms, ions or quantum dots are considered key pieces in quantum applications because they are elements in the development toward a scalable spin-based quantum computer through universal and basic quantum operations. Ising model is a type of interaction generating entanglement in quantum systems based on matter. In this work, a general bipartite anisotropic Ising model including an inhomogeneous magnetic field is analyzed in a non-local basis. This model summarizes several particular models presented in literature. When evolution is expressed in the Bell basis, it shows a regular block structure suggesting a SU(2) decomposition. Then, their algebraic properties are analyzed in terms of a set of physical parameters which define their group structure. In particular, finite products of pulses in this interaction are analyzed in terms of SU(4) covering. Thus, evolution denotes remarkable properties, in particular those related potentially with entanglement and control, which give a fruitful arena for further quantum developments and generalization.

  6. Structure of multiphoton quantum optics. II. Bipartite systems, physical processes, and heterodyne squeezed states

    SciTech Connect

    Dell'Anno, Fabio; De Siena, Silvio; Illuminati, Fabrizio

    2004-03-01

    Extending the scheme developed for a single mode of the electromagnetic field in the preceding paper [F. Dell'Anno, S. De Siena, and F. Illuminati, Phys. Rev. A 69, 033812 (2004)], we introduce two-mode nonlinear canonical transformations depending on two heterodyne mixing angles. They are defined in terms of Hermitian nonlinear functions that realize heterodyne superpositions of conjugate quadratures of bipartite systems. The canonical transformations diagonalize a class of Hamiltonians describing nondegenerate and degenerate multiphoton processes. We determine the coherent states associated with the canonical transformations, which generalize the nondegenerate two-photon squeezed states. Such heterodyne multiphoton squeezed states are defined as the simultaneous eigenstates of the transformed, coupled annihilation operators. They are generated by nonlinear unitary evolutions acting on two-mode squeezed states. They are non-Gaussian, highly nonclassical, entangled states. For a quadratic nonlinearity the heterodyne multiphoton squeezed states define two-mode cubic phase states. The statistical properties of these states can be widely adjusted by tuning the heterodyne mixing angles, the phases of the nonlinear couplings, as well as the strength of the nonlinearity. For quadratic nonlinearity, we study the higher-order contributions to the susceptibility in nonlinear media and we suggest possible experimental realizations of multiphoton conversion processes generating the cubic-phase heterodyne squeezed states.

  7. Perseus B Taxi Tests in Preparation for a New Series of Flight Tests

    NASA Technical Reports Server (NTRS)

    1998-01-01

    The Perseus B remotely piloted aircraft taxis on the runway at Edwards Air Force Base, California, before a series of development flights at NASA's Dryden flight Research Center. The Perseus B is the latest of three versions of the Perseus design developed by Aurora Flight Sciences under NASA's Environmental Research Aircraft and Sensor Technology (ERAST) program. Perseus B is a remotely piloted aircraft developed as a design-performance testbed under NASA's Environmental Research Aircraft and Sensor Technology (ERAST) project. Perseus is one of several flight vehicles involved in the ERAST project. A piston engine, propeller-powered aircraft, Perseus was designed and built by Aurora Flight Sciences Corporation, Manassas, Virginia. The objectives of Perseus B's ERAST flight tests have been to reach and maintain horizontal flight above altitudes of 60,000 feet and demonstrate the capability to fly missions lasting from 8 to 24 hours, depending on payload and altitude requirements. The Perseus B aircraft established an unofficial altitude record for a single-engine, propeller-driven, remotely piloted aircraft on June 27, 1998. It reached an altitude of 60,280 feet. In 1999, several modifications were made to the Perseus aircraft including engine, avionics, and flight-control-system improvements. These improvements were evaluated in a series of operational readiness and test missions at the Dryden Flight Research Center, Edwards, California. Perseus is a high-wing monoplane with a conventional tail design. Its narrow, straight, high-aspect-ratio wing is mounted atop the fuselage. The aircraft is pusher-designed with the propeller mounted in the rear. This design allows for interchangeable scientific-instrument payloads to be placed in the forward fuselage. The design also allows for unobstructed airflow to the sensors and other devices mounted in the payload compartment. The Perseus B that underwent test and development in 1999 was the third generation of the Perseus

  8. Shuttle Endeavour Mated to 747 SCA Taxi to Runway for Delivery to Kennedy Space Center, Florida

    NASA Technical Reports Server (NTRS)

    1991-01-01

    NASA's 747 Shuttle Carrier Aircraft No. 911, with the space shuttle orbiter Endeavour securely mounted atop its fuselage, taxies to the runway to begin the ferry flight from Rockwell's Plant 42 at Palmdale, California, where the orbiter was built, to the Kennedy Space Center, Florida. At Kennedy, the space vehicle was processed and launched on orbital mission STS-49, which landed at NASA's Ames-Dryden Flight Research Facility (later redesignated Dryden Flight Research Center), Edwards, California, 16 May 1992. NASA 911, the second modified 747 that went into service in November 1990, has special support struts atop the fuselage and internal strengthening to accommodate the added weight of the orbiters. Space Shuttles are the main element of America's Space Transportation System and are used for space research and other space applications. The shuttles are the first vehicles capable of being launched into space and returning to Earth on a routine basis. Space Shuttles are used as orbiting laboratories in which scientists and mission specialists conduct a wide variety of scientific experiments. Crews aboard shuttles place satellites in orbit, rendezvous with satellites to carry out repair missions and return them to space, and retrieve satellites and return them to Earth for refurbishment and reuse. Space Shuttles are true aerospace vehicles. They leave Earth and its atmosphere under rocket power provided by three liquid-propellant main engines with two solid-propellant boosters attached plus an external liquid-fuel tank. After their orbital missions, they streak back through the atmosphere and land like airplanes. The returning shuttles, however, land like gliders, without power and on runways. Other rockets can place heavy payloads into orbit, but, they can only be used once. Space Shuttles are designed to be continually reused. When Space Shuttles are used to transport complete scientific laboratories into space, the laboratories remain inside the payload bay

  9. Perseus B Taxi Tests in Preparation for a New Series of Flight Tests

    NASA Technical Reports Server (NTRS)

    1998-01-01

    The Perseus B remotely piloted aircraft taxis on the runway at Edwards Air Force Base, California, before a series of development flights at NASA's Dryden flight Research Center. The Perseus B is the latest of three versions of the Perseus design developed by Aurora Flight Sciences under NASA's Environmental Research Aircraft and Sensor Technology (ERAST) program. Perseus B is a remotely piloted aircraft developed as a design-performance testbed under NASA's Environmental Research Aircraft and Sensor Technology (ERAST) project. Perseus is one of several flight vehicles involved in the ERAST project. A piston engine, propeller-powered aircraft, Perseus was designed and built by Aurora Flight Sciences Corporation, Manassas, Virginia. The objectives of Perseus B's ERAST flight tests have been to reach and maintain horizontal flight above altitudes of 60,000 feet and demonstrate the capability to fly missions lasting from 8 to 24 hours, depending on payload and altitude requirements. The Perseus B aircraft established an unofficial altitude record for a single-engine, propeller-driven, remotely piloted aircraft on June 27, 1998. It reached an altitude of 60,280 feet. In 1999, several modifications were made to the Perseus aircraft including engine, avionics, and flight-control-system improvements. These improvements were evaluated in a series of operational readiness and test missions at the Dryden Flight Research Center, Edwards, California. Perseus is a high-wing monoplane with a conventional tail design. Its narrow, straight, high-aspect-ratio wing is mounted atop the fuselage. The aircraft is pusher-designed with the propeller mounted in the rear. This design allows for interchangeable scientific-instrument payloads to be placed in the forward fuselage. The design also allows for unobstructed airflow to the sensors and other devices mounted in the payload compartment. The Perseus B that underwent test and development in 1999 was the third generation of the Perseus

  10. Reactions of Nicotiana species to inoculation with monopartite and bipartite begomoviruses

    PubMed Central

    2011-01-01

    Background Some Nicotiana species are widely used as experimental hosts for plant viruses. Nicotiana species differ in ploidy levels, chromosome numbers and have diverse geographical origins. Thus, these species are useful model systems to investigate virus-host interactions, co-evolution of pathogens and hosts and the effects of ploidy level on virus resistance/susceptibility. Results Here we have studied the responses of seven Nicotiana species to inoculation with Cotton leaf curl Multan virus (CLCuMV), a monopartite begomovirus, and Tomato leaf curl New Delhi virus (ToLCNDV), a bipartite begomovirus, both from the Indian subcontinent. All Nicotiana species supported the replication of both begomoviruses in inoculated leaves. However, only three Nicotiana species, namely N. benthamiana, N. tabacum and N. sylvestris showed symptoms when inoculated with ToLCNDV, while N. benthamiana was the only species that developed leaf curl symptoms when inoculated with CLCuMV. CLCuMV accumulated to detectable levels in N. tabacum, but plants remained asymptomatic. A previously identified mutation of RNA dependent RNA polymerase 1 was shown to be present only in N. benthamiana. The finding is in line with earlier results showing that the susceptibility of this species to a diverse range of plant viruses correlates with a defective RNA silencing-mediated host defense. Conclusions The results presented show that individual Nicotiana species respond differently to inoculation with begomoviruses. The inability of begomoviruses to systemically infect several Nicotiana species is likely due to inhibition of virus movement, rather than replication, and thus provides a novel model to study virus-host interactions in resistant/susceptible hosts. PMID:22011413

  11. Metabolism-dependent taxis towards (methyl)phenols is coupled through the most abundant of three polar localized Aer-like proteins of Pseudomonas putida.

    PubMed

    Sarand, Inga; Osterberg, Sofia; Holmqvist, Sofie; Holmfeldt, Per; Skärfstad, Eleonore; Parales, Rebecca E; Shingler, Victoria

    2008-05-01

    Comparatively little is known about directed motility of environmental bacteria to common aromatic pollutants. Here, by expressing different parts of a (methyl)phenol-degradative pathway and the use of specific mutants, we show that taxis of Pseudomonas putida towards (methyl)phenols is dictated by its ability to catabolize the aromatic compound. Thus, in contrast to previously described chemoreceptor-mediated chemotaxis mechanisms towards benzoate, naphthalene and toluene, taxis in response to (methyl)phenols is mediated by metabolism-dependent behaviour. Here we show that P. putida differentially expresses three Aer-like receptors that are all polar-localized through interactions with CheA, and that inactivation of the most abundant Aer2 protein significantly decreases taxis towards phenolics. In addition, the participation of a sensory signal transduction protein composed of a PAS, a GGDEF and an EAL domain in motility towards these compounds is demonstrated. The results are discussed in the context of the versatility of metabolism-dependent coupling and the necessity for P. putida to integrate diverse metabolic signals from its native heterogeneous soil and water environments.

  12. Prevalence and Factors Associated with Road Traffic Crash among Taxi Drivers in Mekelle Town, Northern Ethiopia, 2014: A Cross Sectional Study

    PubMed Central

    Asefa, Nigus Gebremedhin; Ingale, Lalit; Shumey, Ashenafi; Yang, Hannah

    2015-01-01

    Objectives The 2013 World Health Organization Status Report on Road Safety estimated that approximately 1.24 million deaths occur annually due to road traffic crashes with most of the burden falling on low- and middle-income countries. The objective of this research is to study the prevalence of road traffic crashes in Mekelle, Tigray, Northern Ethiopia and to identify risk factors with the ultimate goal of informing prevention activities and policies. Methods This study used a cross-sectional design to measure the prevalence and factors associated with road traffic crashes among 4-wheeled minibus (n = 130) and 3-wheeled Bajaj (n = 582) taxi drivers in Mekelle, Ethiopia. Bivariate and multivariate logistic regression were used to evaluate the association between risk factors and drivers’ involvement in a road traffic crash within the 3 years prior to the survey. Findings Among the 712 taxi drivers, 26.4% (n = 188) of them reported involvement in a road traffic crash within the past 3 years. Drivers who listened to mass media had decreased likelihood of road traffic crash involvement (AOR = 0.51, 0.33–0.78), while speedy driving (AOR = 4.57, 3.05–7.44), receipt of a prior traffic punishment (AOR = 4.57, 2.67–7.85), and driving a mechanically faulty taxi (AOR = 4.91, 2.81–8.61) were strongly associated with road traffic crash involvement. Receiving mobile phone calls while driving (AOR = 1.91, 1.24–2.92) and history of alcohol use (AOR = 1.51, 1.00–2.28) were also associated with higher odds of road traffic crash involvement. Conclusion The results of this study show that taxi drivers in Mekelle habitually place themselves at increased risk of road traffic crashes by violating traffic laws, especially related to speedy driving, mobile phone use, and taxi maintenance. This research can be used to support re-evaluation of the type, severity, and enforcement of traffic violation penalties. PMID:25781940

  13. Complete genome sequence of Jacquemontia yellow mosaic virus, a novel begomovirus from Venezuela related to other New World bipartite begomoviruses infecting Convolvulaceae.

    PubMed

    Fiallo-Olivé, Elvira; Chirinos, Dorys T; Geraud-Pouey, Francis; Moriones, Enrique; Navas-Castillo, Jesús

    2014-07-01

    The complete genome of a bipartite begomovirus (genus Begomovirus, family Geminiviridae) infecting Jacquemontia sp. (Convolvulaceae) in Venezuela has been cloned and sequenced. Sequence comparison and phylogenetic analysis have shown that it represents an isolate of a novel species with closest relatives being two New World bipartite begomoviruses that infect Convolvulaceae, Jacquemontia mosaic Yucatan virus and Merremia mosaic virus. The DNA-As of these begomoviruses, however, share only 77.0-78.4 % nucleotide sequence identity with the DNA-A of the isolate described here, for which a recombinant origin is suggested. Based on the symptoms observed in the field, the name Jacquemontia yellow mosaic virus (JacYMV) is proposed for this novel bipartite begomovirus.

  14. A novel bipartite UNC-101/AP-1 μ1 binding signal mediates KVS-4/Kv2.1 somatodendritic distribution in Caenorhabditis elegans.

    PubMed

    Zhou, Xin; Zeng, Jia; Ouyang, Chenxi; Luo, Qianyun; Yu, Miao; Yang, Zhenrong; Wang, Hui; Shen, Kang; Shi, Anbing

    2016-01-01

    Potassium channels such as Kv2.1 are targeted to specific subcellular compartments to fulfill various functions. However, the mechanisms for their localization are poorly understood. Here, we show that KVS-4/Kv2.1 somatodendritic localization in Caenorhabditis elegansDA9 neuron requires UNC-101(AP-1 μ subunit). We define a bipartite sorting signal within KVS-4 consisting of a C-terminal EQMIL and N-terminal WNIIE motifs. The bipartite signal is sufficient to target nonpolarized transmembrane protein MIG-13 into DA9 somatodendritic compartments. Furthermore, we found that AP-1 interacts with the bipartite signal through UNC-101/AP-1 μ N-terminal predicted Longin-like domain. Our results provide new insight into the mechanisms of Kv2.1 post-Golgi sorting and targeting.

  15. Opposite responses by different chemoreceptors set a tunable preference point in Escherichia coli pH taxis.

    PubMed

    Yang, Yiling; Sourjik, Victor

    2012-12-01

    In bacterial habitats, the ability to follow spatial gradients of environmental factors that affect growth and survival can be largely advantageous. The bacterial strategy for unidirectional chemotactic movement in gradients of typical attractants or repellents, such as nutrients or toxins, is well understood. Optimal levels of other factors, however, may be found at intermediate points of a gradient and thus require a bidirectional tactic movement towards the optimum. Here we investigate the chemotactic response of Escherichia coli to pH as an example of such bidirectional taxis. We confirm that E. coli uses chemotaxis to avoid both extremes of low and high pH and demonstrate that the sign of the response is inverted from base-seeking to acid-seeking at a well-defined value of pH. Such inversion is enabled by opposing pH sensing by the two major chemoreceptors, Tar and Tsr, such that the relative strength of the response is modulated by adaptive receptor methylation. We further demonstrate that the inversion point of the pH response can be adjusted in response to changes in the cell density.

  16. Cloning and characterization of the Salmonella typhimurium-specific chemoreceptor Tcp for taxis to citrate and from phenol.

    PubMed

    Yamamoto, K; Imae, Y

    1993-01-01

    Salmonella typhimurium shows an attractant response to citrate and a repellent response to phenol, and a chemoreceptor mediating these responses has been identified and named Tcp (taxis to citrate and away from phenol). Tcp is one of the methyl-accepting chemotaxis proteins that have a molecular mass of approximately 60 kDa estimated by SDS/PAGE, and its methylation level is increased by citrate and decreased by phenol. Tcp also mediates an attractant response to metal-citrate complexes. The complete nucleotide sequence of the tcp coding region has been determined. The deduced amino acid sequence of Tcp, consisting of 547-amino acid residues, is homologous with that of the aspartate chemoreceptor of S. typhimurium. Thus, Tcp is another member of the bacterial transmembrane chemoreceptor family. Because citrate is a good carbon source for S. typhimurium but is not a carbon source for the closely related species Escherichia coli and because citrate utilization is used as a key diagnostic character to distinguish these species, it is reasonable to assume that Tcp is specific to S. typhimurium.

  17. Driving performance changes of middle-aged experienced taxi drivers due to distraction tasks during unexpected situations.

    PubMed

    Kim, Hyung-Sik; Choi, Mi-Hyun; Choi, Jin-Seung; Kim, Hyun-Joo; Hong, Sang-Pyo; Jun, Jae-Hoon; Tack, Gye-Rae; Kim, Boseong; Min, Ung-Chan; Lim, Dae-Woon; Chung, Soon-Cheol

    2013-10-01

    This study investigated the effects of distraction taskssuch as sending a text message with a cellphone and searching navigation with car navigation system-on the driving performance of 29 highly experienced taxi drivers in their 50s. All participants were instructed to drive using a driving simulator for 2 min. while maintaining a constant distance from the vehicle in front and a constant speed. Participants drove without any distractions for the first minute. For an additional minute, they performed Driving Only or performed a task while driving (Driving + Sending Text Message or Driving + Searching Navigation). An unexpected situation, in which the participant had to stop abruptly due to a sudden stop of the preceding vehicle, occurred during this period. Driving performance during the unexpected situation was evaluated by car control variables, medial-lateral coefficient of variation and brake time, and by motion variables such as the jerk-cost function. Compared to Driving Only, jerk-cost function, medial-lateral coefficient of variation, and brake time increased during Driving + Sending Text Message or Driving + Searching Navigation.

  18. Jobs, food, taxis and journals: complexities of implementing Stepping Stones and Creating Futures in urban informal settlements in South Africa.

    PubMed

    Gibbs, Andrew; Jewkes, Rachel; Mbatha, Nompumelelo; Washington, Laura; Willan, Samantha

    2014-01-01

    This paper seeks to refocus debates on structural interventions away from 'assessing' their effectiveness towards understanding processes around how such interventions are implemented. Implementation Science is focused on understanding potential challenges of translating interventions from highly controlled conditions into 'real life' settings. Using the case study of Stepping Stones and Creating Futures a structural and behavioural intervention to reduce intimate partner violence and HIV risk behaviours amongst young women and men in urban informal settlements, we explore the challenges of implementing such an approach. We move beyond simply describing challenges of implementing, to understand how these challenges had an impact on the safe social space the intervention seeks to create as its underlying theory of change. We identify four major challenges of implementation: taxi fares, food provided during the intervention, young people's ongoing need to work and journals provided during the intervention. We suggest that, in different ways, these factors all impinged on the emergence of a safe social space. Understanding the challenges of implementing the intervention is critical for reflecting on scaling up interventions. Central to this is the need to work with participants to help them negotiate the challenges of participating in interventions.

  19. Highly efficient gene targeting in Penicillium chrysogenum using the bi-partite approach in deltalig4 or deltaku70 mutants.

    PubMed

    de Boer, Paulo; Bastiaans, Jeroen; Touw, Hesselien; Kerkman, Richard; Bronkhof, Jurian; van den Berg, Marco; Offringa, Remko

    2010-10-01

    Inactivating the non-homologous end-joining (NHEJ) pathway is a well established method to increase gene targeting (GT) efficiencies in filamentous fungi. In this study we have compared the effect of inactivating the NHEJ genes ku70 or lig4 on GT in the industrial penicillin producer Penicillium chrysogenum. Deletion of both genes resulted in strongly increased GT efficiencies at three different loci but not higher than 70%, implying that other, yet uncharacterized, recombination pathways are still active causing a part of the DNA to be integrated via non-homologous recombination. To further increase the GT efficiency we applied the bi-partite approach, in which the DNA fragment for integration was split in two non-functional overlapping parts that via homologous recombination invivo can form a functional selection marker. The combined NHEJ mutant and bi-partite approach further increased GT frequencies up to approximately 90%, which will enable the efficient high throughput engineering of the P. chrysogenum genome. We expect that this combined approach will function with similar high efficiencies in other filamentous fungi.

  20. The N Terminus of the Retinoblastoma Protein Inhibits DNA Replication via a Bipartite Mechanism Disrupted in Partially Penetrant Retinoblastomas.

    PubMed

    Borysov, Sergiy I; Nepon-Sixt, Brook S; Alexandrow, Mark G

    2015-12-28

    The N-terminal domain of the retinoblastoma (Rb) tumor suppressor protein (RbN) harbors in-frame exon deletions in partially penetrant hereditary retinoblastomas and is known to impair cell growth and tumorigenesis. However, how such RbN deletions contribute to Rb tumor- and growth-suppressive functions is unknown. Here we establish that RbN directly inhibits DNA replication initiation and elongation using a bipartite mechanism involving N-terminal exons lost in cancer. Specifically, Rb exon 7 is necessary and sufficient to target and inhibit the replicative CMG helicase, resulting in the accumulation of inactive CMGs on chromatin. An independent N-terminal loop domain, which forms a projection, specifically blocks DNA polymerase α (Pol-α) and Ctf4 recruitment without affecting DNA polymerases ε and δ or the CMG helicase. Individual disruption of exon 7 or the projection in RbN or Rb, as occurs in inherited cancers, partially impairs the ability of Rb/RbN to inhibit DNA replication and block G1-to-S cell cycle transit. However, their combined loss abolishes these functions of Rb. Thus, Rb growth-suppressive functions include its ability to block replicative complexes via bipartite, independent, and additive N-terminal domains. The partial loss of replication, CMG, or Pol-α control provides a potential molecular explanation for how N-terminal Rb loss-of-function deletions contribute to the etiology of partially penetrant retinoblastomas.

  1. Molecular characterization of a distinct bipartite Begomovirus species infecting ivy gourd (Coccinia grandis L.) in Tamil Nadu, India.

    PubMed

    Nagendran, K; Satya, V K; Mohankumar, S; Karthikeyan, G

    2016-02-01

    A distinct bipartite begomovirus was found to be associated with the mosaic disease on ivy gourd (Coccinia grandis L.) in Tamil Nadu, India. The complete DNA A and DNA B components were cloned by rolling circle amplification. Genome organization of this virus is found to be typical of Old World bipartite begomovirus. The association of betasatellite component with this virus is absent. The closest nucleotide identity of 73.4 % was seen with the Loofa yellow mosaic virus (LYMV-[VN]-AF509739) suggesting that it is a new virus species Coccinia mosaic virus (CoMoV-Ivy gourd [TN TDV Coc1]) and distantly related to the other known begomoviruses. The DNA B component shared a maximum identity of 55 % with that of Tomato leaf curl New Delhi virus (ToLCNDV). In the phylogenetic analysis, CoMoV-Ivy gourd form cluster separate from other begomoviruses. Recombination analysis showed that there was no recombination event in the genome. This is the distinct begomovirus infecting ivy gourd.

  2. Enhancing non-local correlations in the bipartite partitions of two qubit-system with non-mutual interaction

    SciTech Connect

    Mohamed, A.-B.A.; Joshi, A.; Hassan, S.S.

    2016-03-15

    Several quantum-mechanical correlations, notably, quantum entanglement, measurement-induced nonlocality and Bell nonlocality are studied for a two qubit-system having no mutual interaction. Analytical expressions for the measures of these quantum-mechanical correlations of different bipartite partitions of the system are obtained, for initially two entangled qubits and the two photons are in their vacuum states. It is found that the qubits-fields interaction leads to the loss and gain of the initial quantum correlations. The lost initial quantum correlations transfer from the qubits to the cavity fields. It is found that the maximal violation of Bell’s inequality is occurring when the quantum correlations of both the logarithmic negativity and measurement-induced nonlocality reach particular values. The maximal violation of Bell’s inequality occurs only for certain bipartite partitions of the system. The frequency detuning leads to quick oscillations of the quantum correlations and inhibits their transfer from the qubits to the cavity modes. It is also found that the dynamical behavior of the quantum correlation clearly depends on the qubit distribution angle.

  3. Maximal violation of a bipartite three-setting, two-outcome Bell inequality using infinite-dimensional quantum systems

    SciTech Connect

    Pal, Karoly F.; Vertesi, Tamas

    2010-08-15

    The I{sub 3322} inequality is the simplest bipartite two-outcome Bell inequality beyond the Clauser-Horne-Shimony-Holt (CHSH) inequality, consisting of three two-outcome measurements per party. In the case of the CHSH inequality the maximal quantum violation can already be attained with local two-dimensional quantum systems; however, there is no such evidence for the I{sub 3322} inequality. In this paper a family of measurement operators and states is given which enables us to attain the maximum quantum value in an infinite-dimensional Hilbert space. Further, it is conjectured that our construction is optimal in the sense that measuring finite-dimensional quantum systems is not enough to achieve the true quantum maximum. We also describe an efficient iterative algorithm for computing quantum maximum of an arbitrary two-outcome Bell inequality in any given Hilbert space dimension. This algorithm played a key role in obtaining our results for the I{sub 3322} inequality, and we also applied it to improve on our previous results concerning the maximum quantum violation of several bipartite two-outcome Bell inequalities with up to five settings per party.

  4. Characterization of the bipartite nuclear localization signal of protein LANA2 from Kaposi's sarcoma-associated herpesvirus.

    PubMed Central

    Muñoz-Fontela, Cesar; Rodríguez, Estefanía; Nombela, Cesar; Arroyo, Javier; Rivas, Carmen

    2003-01-01

    LANA2 is a nuclear latent protein detected exclusively in Kaposi's sarcoma-associated herpesvirus-infected B cells. The protein inhibits p53-dependent transactivation and apoptosis, suggesting an important role in the transforming activity of the virus. To explore the molecular mechanisms of its nuclear localization, fusion proteins of green fluorescent protein (EGFP) and deletion constructs of LANA2 were expressed in HeLa cells. Only the fragment comprising amino acid residues 355-440 of LANA2 localized in the cell nucleus. This fragment contains two closely located basic domains and forms a putative bipartite nuclear localization signal (NLS). The putative LANA2 NLS was able to target EGFP to the nucleus consistently. Site-directed mutation analyses demonstrated that LANA2 contains a functional bipartite NLS between amino acid positions 367 and 384. In addition, analysis of cells transfected with a cytoplasmic LANA2 mutant revealed that an appropriate subcellular localization may be crucial to regulate p53 activity. PMID:12767255

  5. Energy.

    ERIC Educational Resources Information Center

    Online-Offline, 1998

    1998-01-01

    This issue focuses on the theme of "Energy," and describes several educational resources (Web sites, CD-ROMs and software, videos, books, activities, and other resources). Sidebars offer features on alternative energy, animal energy, internal combustion engines, and energy from food. Subthemes include harnessing energy, human energy, and…

  6. Analysis of carbon substrates used by Listeria monocytogenes during growth in J774A.1 macrophages suggests a bipartite intracellular metabolism

    PubMed Central

    Grubmüller, Stephanie; Schauer, Kristina; Goebel, Werner; Fuchs, Thilo M.; Eisenreich, Wolfgang

    2014-01-01

    Intracellular bacterial pathogens (IBPs) are dependent on various nutrients provided by the host cells. Different strategies may therefore be necessary to adapt the intracellular metabolism of IBPs to the host cells. The specific carbon sources, the catabolic pathways participating in their degradation, and the biosynthetic performances of IBPs are still poorly understood. In this report, we have exploited the technique of 13C-isotopologue profiling to further study the carbon metabolism of Listeria monocytogenes by using the EGDe wild-type strain and mutants (defective in the uptake and/or catabolism of various carbon compounds) replicating in J774A.1 macrophages. For this goal, the infected macrophages were cultivated in the presence of [1,2-13C2]glucose, [U-13C3]glycerol, [U-13C3]pyruvate, [U-13C3]lactate, or a mix of [U-13C]amino acids. GC/MS-based isotopologue profiling showed efficient utilization of amino acids, glucose 6-phosphate, glycerol, and (at a low extent) also of lactate but not of pyruvate by the IBPs. Most amino acids imported from the host cells were directly used for bacterial protein biosynthesis and hardly catabolized. However, Asp was de novo synthesized by the IBPs and not imported from the host cell. As expected, glycerol was catabolized via the ATP-generating lower part of the glycolytic pathway, but apparently not used for gluconeogenesis. The intermediates generated from glucose 6-phosphate in the upper part of the glycolytic pathway and the pentose phosphate shunt likely serve primarily for anabolic purposes (probably for the biosynthesis of cell wall components and nucleotides). This bipartite bacterial metabolism which involves at least two major carbon substrates—glycerol mainly for energy supply and glucose 6-phosphate mainly for indispensible anabolic performances—may put less nutritional stress on the infected host cells, thereby extending the lifespan of the host cells to the benefit of the IBPs. PMID:25405102

  7. Analysis of carbon substrates used by Listeria monocytogenes during growth in J774A.1 macrophages suggests a bipartite intracellular metabolism.

    PubMed

    Grubmüller, Stephanie; Schauer, Kristina; Goebel, Werner; Fuchs, Thilo M; Eisenreich, Wolfgang

    2014-01-01

    Intracellular bacterial pathogens (IBPs) are dependent on various nutrients provided by the host cells. Different strategies may therefore be necessary to adapt the intracellular metabolism of IBPs to the host cells. The specific carbon sources, the catabolic pathways participating in their degradation, and the biosynthetic performances of IBPs are still poorly understood. In this report, we have exploited the technique of (13)C-isotopologue profiling to further study the carbon metabolism of Listeria monocytogenes by using the EGDe wild-type strain and mutants (defective in the uptake and/or catabolism of various carbon compounds) replicating in J774A.1 macrophages. For this goal, the infected macrophages were cultivated in the presence of [1,2-(13)C2]glucose, [U-(13)C3]glycerol, [U-(13)C3]pyruvate, [U-(13)C3]lactate, or a mix of [U-(13)C]amino acids. GC/MS-based isotopologue profiling showed efficient utilization of amino acids, glucose 6-phosphate, glycerol, and (at a low extent) also of lactate but not of pyruvate by the IBPs. Most amino acids imported from the host cells were directly used for bacterial protein biosynthesis and hardly catabolized. However, Asp was de novo synthesized by the IBPs and not imported from the host cell. As expected, glycerol was catabolized via the ATP-generating lower part of the glycolytic pathway, but apparently not used for gluconeogenesis. The intermediates generated from glucose 6-phosphate in the upper part of the glycolytic pathway and the pentose phosphate shunt likely serve primarily for anabolic purposes (probably for the biosynthesis of cell wall components and nucleotides). This bipartite bacterial metabolism which involves at least two major carbon substrates-glycerol mainly for energy supply and glucose 6-phosphate mainly for indispensible anabolic performances-may put less nutritional stress on the infected host cells, thereby extending the lifespan of the host cells to the benefit of the IBPs.

  8. Health risk equations and risk assessment of airborne benzene homologues exposure to drivers and passengers in taxi cabins.

    PubMed

    Chen, Xiaokai; Feng, Lili; Luo, Huilong; Cheng, Heming

    2016-03-01

    Interior air environment and health problems of vehicles have attracted increasing attention, and benzene homologues (BHs) including benzene, toluene, ethylbenzene, xylenes, and styrene are primary hazardous gases in vehicular cabins. The BHs impact on the health of passengers and drivers in 38 taxis is assessed, and health risk equations of in-car BHs to different drivers and passengers are induced. The health risk of in-car BHs for male drivers is the highest among all different receptors and is 1.04, 6.67, and 6.94 times more than ones for female drivers, male passengers, and female passengers, respectively. In-car BHs could not lead to the non-cancer health risk to all passengers and drivers as for the maximal value of non-cancer indices is 0.41 and is less than the unacceptable value (1.00) of non-cancer health risk from USEPA. However, in-car BHs lead to cancer health risk to drivers as for the average value of cancer indices is 1.21E-04 which is 1.21 times more than the unacceptable value (1.00E-04) of cancer health risk from USEPA. Finally, for in-car airborne benzene concentration (X, μg/m(3)) to male drivers, female drivers, male passengers, and female passengers, the cancer health risk equations are Y = 1.48E-06X, Y = 1.42E-06X, Y = 2.22E-07X, and Y = 2.13E-07X, respectively, and the non-cancer health risk equations are Y = 1.70E-03X, Y = 1.63E-03X, Y = 2.55E-04X, and Y = 2.45E-04X, respectively.

  9. The Helicobacter pylori chemotaxis receptor TlpB (HP0103) is required for pH taxis and for colonization of the gastric mucosa.

    PubMed

    Croxen, Matthew A; Sisson, Gary; Melano, Roberto; Hoffman, Paul S

    2006-04-01

    The location of Helicobacter pylori in the gastric mucosa of mammals is defined by natural pH gradients within the gastric mucus, which are more alkaline proximal to the mucosal epithelial cells and more acidic toward the lumen. We have used a microscope slide-based pH gradient assay and video data collection system to document pH-tactic behavior. In response to hydrochloric acid (HCl), H. pylori changes its swimming pattern from straight-line random swimming to arcing or circular patterns that move the motile population away from the strong acid. Bacteria in more-alkaline regions did not swim toward the acid, suggesting the pH taxis is a form of negative chemotaxis. To identify the chemoreceptor(s) responsible for the transduction of pH-tactic signals, a vector-free allelic replacement strategy was used to construct mutations in each of the four annotated chemoreceptor genes (tlpA, tlpB, tlpC, and tlpD) in H. pylori strain SS1 and a motile variant of strain KE26695. All deletion mutants were motile and displayed normal chemotaxis in brucella soft agar, but only tlpB mutants were defective for pH taxis. tlpD mutants exhibited more tumbling and arcing swimming, while tlpC mutants were hypermotile and responsive to acid. While tlpA, tlpC, and tlpD mutants colonized mice to near wild-type levels, tlpB mutants were defective for colonization of highly permissive C57BL/6 interleukin-12 (IL-12) (p40-/-)-deficient mice. Complementation of the tlpB mutant (tlpB expressed from the rdxA locus) restored pH taxis and infectivity for mice. pH taxis, like motility and urease activity, is essential for colonization and persistence in the gastric mucosa, and thus TlpB function might represent a novel target in the development of therapeutics that blind tactic behavior.

  10. The Helicobacter pylori Chemotaxis Receptor TlpB (HP0103) Is Required for pH Taxis and for Colonization of the Gastric Mucosa

    PubMed Central

    Croxen, Matthew A.; Sisson, Gary; Melano, Roberto; Hoffman, Paul S.

    2006-01-01

    The location of Helicobacter pylori in the gastric mucosa of mammals is defined by natural pH gradients within the gastric mucus, which are more alkaline proximal to the mucosal epithelial cells and more acidic toward the lumen. We have used a microscope slide-based pH gradient assay and video data collection system to document pH-tactic behavior. In response to hydrochloric acid (HCl), H. pylori changes its swimming pattern from straight-line random swimming to arcing or circular patterns that move the motile population away from the strong acid. Bacteria in more-alkaline regions did not swim toward the acid, suggesting the pH taxis is a form of negative chemotaxis. To identify the chemoreceptor(s) responsible for the transduction of pH-tactic signals, a vector-free allelic replacement strategy was used to construct mutations in each of the four annotated chemoreceptor genes (tlpA, tlpB, tlpC, and tlpD) in H. pylori strain SS1 and a motile variant of strain KE26695. All deletion mutants were motile and displayed normal chemotaxis in brucella soft agar, but only tlpB mutants were defective for pH taxis. tlpD mutants exhibited more tumbling and arcing swimming, while tlpC mutants were hypermotile and responsive to acid. While tlpA, tlpC, and tlpD mutants colonized mice to near wild-type levels, tlpB mutants were defective for colonization of highly permissive C57BL/6 interleukin-12 (IL-12) (p40−/−)-deficient mice. Complementation of the tlpB mutant (tlpB expressed from the rdxA locus) restored pH taxis and infectivity for mice. pH taxis, like motility and urease activity, is essential for colonization and persistence in the gastric mucosa, and thus TlpB function might represent a novel target in the development of therapeutics that blind tactic behavior. PMID:16547053

  11. Quantum discord with weak measurement operators of quasi-Werner states based on bipartite entangled coherent states

    NASA Astrophysics Data System (ADS)

    Castro, E.; Gómez, R.; Ladera, C. L.; Zambrano, A.

    2013-11-01

    Among many applications quantum weak measurements have been shown to be important in exploring fundamental physics issues, such as the experimental violation of the Heisenberg uncertainty relation and the Hardy paradox, and have also technological implications in quantum optics, quantum metrology and quantum communications, where the precision of the measurement is as important as the precision of quantum state preparation. The theory of weak measurement can be formulated using the pre-and post-selected quantum systems, as well as using the weak measurement operator formalism. In this work, we study the quantum discord (QD) of quasi-Werner mixed states based on bipartite entangled coherent states using the weak measurements operator, instead of the projective measurement operators. We then compare the quantum discord for both kinds of measurement operators, in terms of the entanglement quality, the latter being measured using the concept of concurrence. It's found greater quantum correlations using the weak measurement operators.

  12. A bipartite U1 site represses U1A expression by synergizing with PIE to inhibit nuclear polyadenylation.

    PubMed

    Guan, Fei; Caratozzolo, Rose M; Goraczniak, Rafal; Ho, Eric S; Gunderson, Samuel I

    2007-12-01

    U1A protein negatively autoregulates itself by polyadenylation inhibition of its own pre-mRNA by binding as two molecules to a 3'UTR-located Polyadenylation Inhibitory Element (PIE). The (U1A)2-PIE complex specifically blocks U1A mRNA biosynthesis by inhibiting polyA tail addition, leading to lower mRNA levels. U1 snRNP bound to a 5'ss-like sequence, which we call a U1 site, in the 3'UTRs of certain papillomaviruses leads to inhibition of viral late gene expression via a similar mechanism. Although such U1 sites can also be artificially used to potently silence reporter and endogenous genes, no naturally occurring U1 sites have been found in eukaryotic genes. Here we identify a conserved U1 site in the human U1A gene that is, unexpectedly, within a bipartite element where the other part represses the U1 site via a base-pairing mechanism. The bipartite element inhibits U1A expression via a synergistic action with the nearby PIE. Unexpectedly, synergy is not based on stabilizing binding of the inhibitory factors to the 3'UTR, but rather is a property of the larger ternary complex. Inhibition targets the biosynthetic step of polyA tail addition rather than altering mRNA stability. This is the first example of a functional U1 site in a cellular gene and of a single gene containing two dissimilar elements that inhibit nuclear polyadenylation. Parallels with other examples where U1 snRNP inhibits expression are discussed. We expect that other cellular genes will harbor functional U1 sites.

  13. Indications of a pan-hemispheric bi-partition of the Younger Dryas Stadial from Lake Suigetsu, Japan

    NASA Astrophysics Data System (ADS)

    Schlolaut, Gordon; Brauer, Achim; Nakagawa, Takeshi; Lamb, Henry; Marshall, Michael; Kato-Saito, Megumi; Staff, Richard; Bronk Ramsey, Christopher; Bryant, Charlotte

    2016-04-01

    The Younger Dryas Stadial marks the final succession of climatic fluctuations of the last Glacial. Whilst well studied in records from Europe and Greenland, few high resolution records are available from East Asia. Here we present a high resolution, multi-proxy study of the Lake Suigetsu (Japan) sediments using the 'SG06' composite profile. Utilising microfacies, μXRF, pollen and diatom analysis we characterise changes occurring in the timeframe corresponding to the Younger Dryas Stadial. Firstly, our results show that the climatic equivalent of the Younger Dryas at Lake Suigetsu shows no major lead or lag in comparison to records from the North Atlantic region, which was postulated by an earlier project on the Suigetsu sediments ('SG93'). Reason for this disagreement between the SG06 and SG93 core is that the SG93 core/chronology was compromised by gaps between individual cores and varve count uncertainties. Furthermore, some of the analysed proxies from the SG06 core show a sub-division of the Younger Dryas Stadial. The timing of this sub-division is similar to the bi-partition of the Younger Dryas Stadial observed in a number of European records (e.g. Lane et al., 2013). This bi-partition was related to a northward shift of the westerly wind jet in the North Atlantic region. Our findings imply that the underlying climatic mechanism operated on a hemispheric rather than just on a regional scale. References: Lane et al. 2013, Volcanic ash reveals time-transgressive abrupt climate change during the Younger Dryas, Geology 41, 1251-1254

  14. Ultracold fermions in a one-dimensional bipartite optical lattice: Metal-insulator transitions driven by shaking

    NASA Astrophysics Data System (ADS)

    Di Liberto, M.; Malpetti, D.; Japaridze, G. I.; Morais Smith, C.

    2014-08-01

    We theoretically investigate the behavior of a system of fermionic atoms loaded in a bipartite one-dimensional optical lattice that is under the action of an external time-periodic driving force. By using Floquet theory, an effective model is derived. The bare hopping coefficients are renormalized by zeroth-order Bessel functions of the first kind with different arguments for the nearest-neighbor and next-nearest-neighbor hopping. The insulating behavior characterizing the system at half filling in the absence of driving is dynamically suppressed, and for particular values of the driving parameter the system becomes either a standard metal or an unconventional metal with four Fermi points. The existence of the four-Fermi-point metal relies on the fact that, as a consequence of the shaking procedure, the next-nearest-neighbor hopping coefficients become significant compared to the nearest-neighbor ones. We use the bosonization technique to investigate the effect of on-site Hubbard interactions on the four-Fermi-point metal-insulator phase transition. Attractive interactions are expected to enlarge the regime of parameters where the unconventional metallic phase arises, whereas repulsive interactions reduce it. This metallic phase is known to be a Luther-Emery liquid (spin-gapped metal) for both repulsive and attractive interactions, contrary to the usual Hubbard model, which exhibits a Mott-insulator phase for repulsive interactions. Ultracold fermions in driven one-dimensional bipartite optical lattices provide an interesting platform for the realization of this long-studied four-Fermi-point unconventional metal.

  15. The Aer protein and the serine chemoreceptor Tsr independently sense intracellular energy levels and transduce oxygen, redox, and energy signals for Escherichia coli behavior

    PubMed Central

    Rebbapragada, Anuradha; Johnson, Mark S.; Harding, Gordon P.; Zuccarelli, Anthony J.; Fletcher, Hansel M.; Zhulin, Igor B.; Taylor, Barry L.

    1997-01-01

    We identified a protein, Aer, as a signal transducer that senses intracellular energy levels rather than the external environment and that transduces signals for aerotaxis (taxis to oxygen) and other energy-dependent behavioral responses in Escherichia coli. Domains in Aer are similar to the signaling domain in chemotaxis receptors and the putative oxygen-sensing domain of some transcriptional activators. A putative FAD-binding site in the N-terminal domain of Aer shares a consensus sequence with the NifL, Bat, and Wc-1 signal-transducing proteins that regulate gene expression in response to redox changes, oxygen, and blue light, respectively. A double mutant deficient in aer and tsr, which codes for the serine chemoreceptor, was negative for aerotaxis, redox taxis, and glycerol taxis, each of which requires the proton motive force and/or electron transport system for signaling. We propose that Aer and Tsr sense the proton motive force or cellular redox state and thereby integrate diverse signals that guide E. coli to environments where maximal energy is available for growth. PMID:9380671

  16. Energy

    DTIC Science & Technology

    2003-01-01

    Canada, Britain, and Spain. We found that the energy industry is not in crisis ; however, U.S. government policies, laws, dollars, and even public...CEIMAT (Centro de Investagaciones Energeticas , Medioambeintales y Tecnologicas) Research and development Page 3 of 28ENERGY 8/10/04http://www.ndu.edu...procurement or storage of standard, common use fuels. NATURAL GAS Natural gas, abundant globally and domestically, offers energy versatility among

  17. Emergent infinite-randomness fixed points from the extensive random bipartitions of the spin-1 Affleck-Kennedy-Lieb-Tasaki topological state

    NASA Astrophysics Data System (ADS)

    Lu, Min; Rao, Wen-Jia; Narayanan, Rajesh; Wan, Xin; Zhang, Guang-Ming

    2016-12-01

    Quantum entanglement under an extensive bipartition can reveal the critical boundary theory of a topological phase in a parameter space. In this study we demonstrate that the infinite-randomness fixed point for spin-1/2 degrees of freedom can emerge from an extensive random bipartition of the spin-1 Affleck-Kennedy-Lieb-Tasaki chain. The nested entanglement entropy of the ground state of the reduced density matrix exhibits a logarithmic scaling with an effective central charge c ˜=0.72 ±0.02 ≈ln2 . We further discuss, in the language of bulk quantum entanglement, how to understand all phase boundaries and the surrounding Griffiths phases for the antiferromagnetic Heisenberg spin-1 chain with quenched disorder and dimerization.

  18. Bipartite output consensus in networked multi-agent systems of high-order power integrators with signed digraph and input noises

    NASA Astrophysics Data System (ADS)

    Ma, Hongwen; Liu, Derong; Wang, Ding; Luo, Biao

    2016-10-01

    In this paper, we concentrate on investigating bipartite output consensus in networked multi-agent systems of high-order power integrators. Systems with power integrator are ubiquitous among weakly coupled, unstable and underactuated mechanical systems. In the presence of input noises, an adaptive disturbance compensator and a technique of adding power integrator are introduced to the complex nonlinear multi-agent systems to reduce the deterioration of system performance. Additionally, due to the existence of negative communication weights among agents, whether bipartite output consensus of high-order power integrators can be achieved remains unknown. Therefore, it is of great importance to study this issue. The underlying idea of designing the distributed controller is to combine the output information of each agent itself and its neighbours, the state feedback within its internal system and input adaptive noise compensator all together. When the signed digraph is structurally balanced, bipartite output consensus can be reached. Finally, numerical simulations are provided to verify the validity of the developed criteria.

  19. Evidence for a bi-partition of the Younger Dryas Stadial in East Asia associated with inversed climate characteristics compared to Europe

    PubMed Central

    Schlolaut, Gordon; Brauer, Achim; Nakagawa, Takeshi; Lamb, Henry F.; Tyler, Jonathan J.; Staff, Richard A.; Marshall, Michael H.; Bronk Ramsey, Christopher; Bryant, Charlotte L.; Tarasov, Pavel E.

    2017-01-01

    The Younger Dryas Stadial (YDS) was an episode of northern hemispheric cooling which occurred within the Last Glacial Interglacial Transition (LGIT). A major driver for the YDS climate was a weakening of the Atlantic Meridional Overturning Circulation (AMOC). It has been inferred that the AMOC began to strengthen mid-YDS, producing a bipartite structure of the YDS in records from continental Europe. These records imply that the polar front and westerlies shifted northward, producing a warmer second phase of the YDS in Europe. Here we present multi-proxy data from the sediments of Lake Suigetsu (Japan), as evidence that a related bi-partition of the YDS also occurred in East Asia. Besides showing for the first time that the bi-partition was not limited to the North Atlantic/European region, the data also imply a climatic dipole between Europe and East Asia since the cold-warm characteristics are reversed at Lake Suigetsu. We suggest that changes in eastward moisture transport from the North Atlantic are the primary mechanism by which the teleconnection can be explained. PMID:28361872

  20. Evidence for a bi-partition of the Younger Dryas Stadial in East Asia associated with inversed climate characteristics compared to Europe.

    PubMed

    Schlolaut, Gordon; Brauer, Achim; Nakagawa, Takeshi; Lamb, Henry F; Tyler, Jonathan J; Staff, Richard A; Marshall, Michael H; Bronk Ramsey, Christopher; Bryant, Charlotte L; Tarasov, Pavel E

    2017-03-31

    The Younger Dryas Stadial (YDS) was an episode of northern hemispheric cooling which occurred within the Last Glacial Interglacial Transition (LGIT). A major driver for the YDS climate was a weakening of the Atlantic Meridional Overturning Circulation (AMOC). It has been inferred that the AMOC began to strengthen mid-YDS, producing a bipartite structure of the YDS in records from continental Europe. These records imply that the polar front and westerlies shifted northward, producing a warmer second phase of the YDS in Europe. Here we present multi-proxy data from the sediments of Lake Suigetsu (Japan), as evidence that a related bi-partition of the YDS also occurred in East Asia. Besides showing for the first time that the bi-partition was not limited to the North Atlantic/European region, the data also imply a climatic dipole between Europe and East Asia since the cold-warm characteristics are reversed at Lake Suigetsu. We suggest that changes in eastward moisture transport from the North Atlantic are the primary mechanism by which the teleconnection can be explained.

  1. Bipartite recognition and conformational sampling mechanisms for hydride transfer from nicotinamide coenzyme to FMN in pentaerythritol tetranitrate reductase.

    PubMed

    Pudney, Christopher R; Hay, Sam; Scrutton, Nigel S

    2009-09-01

    Elucidating the origin of substrate and coenzyme specificity has been the focus of much work relating to enzyme engineering. Many enzymes exhibit tight specificity for particular substrates despite a close structural relationship to other nonreactive compounds. This tight specificity is especially remarkable and important biologically for the coenzymes NADH and NADPH. In the present study, we examined the preference of pentaerythritol tetranitrate reductase, an 'old yellow enzyme' family member, for the coenzymes NADPH over NADH. Using structural and mutagenesis studies, we have previously established that the coenzyme nicotinamide group is the key binding determinant in old yellow enzymes [Khan H et al. (2005) FEBS J 272, 4660-4671]. We have now performed detailed transient-state studies using NAD(P)H and the nonreactive analogues 1,4,5,6-tetrahydroNAD(P)H [NAD(P)H4], leading us to uncover an additional binding step in the reductive half-reaction of pentaerythritol tetranitrate reductase. We suggest that this initial binding step may primarily reflect binding of the adenine ribophosphate portion of the coenzyme, and that the second step reflects a rearrangement of the nicotinamide. Bipartite recognition, in which the adenine ribophosphate moiety localizes the coenzyme in the active site region, enables subsequent and localized searches of configurational space by the nicotinamide moiety to form the catalytically relevant charge-transfer complex. We suggest that this localized search contributes to catalytic efficiency via the principle of 'reduction in dimensionality'.

  2. Interaction of the eukaryotic initiation factor 4E with 4E-BP2 at a dynamic bipartite interface.

    PubMed

    Lukhele, Sabelo; Bah, Alaji; Lin, Hong; Sonenberg, Nahum; Forman-Kay, Julie D

    2013-12-03

    Cap-dependent translation initiation is regulated by the interaction of eukaryotic initiation factor 4E (eIF4E) with eIF4E binding proteins (4E-BPs). Whereas the binding of 4E-BP peptides containing the eIF4E-binding ⁵⁴YXXXXLΦ⁶⁰ motif has been studied, atomic-level characterization of the interaction of eIF4E with full-length 4E-BPs has been lacking. Here, we use isothermal titration calorimetry and nuclear magnetic resonance spectroscopy to characterize the dynamic, structural and binding properties of 4E-BP2. Although disordered, 4E-BP2 contains significant fluctuating secondary structure and binds eIF4E at an extensive bipartite interface including the canonical ⁵⁴YXXXXLΦ⁶⁰ and ⁷⁸IPGVT⁸² sites. Each of the two binding elements individually has submicromolar affinity and exchange on and off of the eIF4E surface within the context of the overall nanomolar complex. This dynamic interaction facilitates exposure of regulatory phosphorylation sites within the complex. The 4E-BP2 interface on eIF4E overlaps yet is more extensive than the eIF4G:eIF4E interface, suggesting that these key interactions may be differentially targeted for therapeutics.

  3. Enhancement of human DNA polymerase η activity and fidelity is dependent upon a bipartite interaction with the Werner syndrome protein.

    PubMed

    Maddukuri, Leena; Ketkar, Amit; Eddy, Sarah; Zafar, Maroof K; Griffin, Wezley C; Eoff, Robert L

    2012-12-07

    We have investigated the interaction between human DNA polymerase η (hpol η) and the Werner syndrome protein (WRN). Functional assays revealed that the WRN exonuclease and RecQ C-terminal (RQC) domains are necessary for full stimulation of hpol η-catalyzed formation of correct base pairs. We find that WRN does not stimulate hpol η-catalyzed formation of mispairs. Moreover, the exonuclease activity of WRN prevents stable mispair formation by hpol η. These results are consistent with a proofreading activity for WRN during single-nucleotide additions. ATP hydrolysis by WRN appears to attenuate stimulation of hpol η. Pre-steady-state kinetic results show that k(pol) is increased 4-fold by WRN. Finally, pulldown assays reveal a bipartite physical interaction between hpol η and WRN that is mediated by the exonuclease and RQC domains. Taken together, these results are consistent with alteration of the rate-limiting step in polymerase catalysis by direct protein-protein interactions between WRN and hpol η. In summary, WRN improves the efficiency and fidelity of hpol η to promote more effective replication of DNA.

  4. Beyond ectomycorrhizal bipartite networks: projected networks demonstrate contrasted patterns between early- and late-successional plants in Corsica

    PubMed Central

    Taudiere, Adrien; Munoz, François; Lesne, Annick; Monnet, Anne-Christine; Bellanger, Jean-Michel; Selosse, Marc-André; Moreau, Pierre-Arthur; Richard, Franck

    2015-01-01

    The ectomycorrhizal (ECM) symbiosis connects mutualistic plants and fungal species into bipartite networks. While links between one focal ECM plant and its fungal symbionts have been widely documented, systemic views of ECM networks are lacking, in particular, concerning the ability of fungal species to mediate indirect ecological interactions between ECM plant species (projected-ECM networks). We assembled a large dataset of plant–fungi associations at the species level and at the scale of Corsica using molecular data and unambiguously host-assigned records to: (i) examine the correlation between the number of fungal symbionts of a plant species and the average specialization of these fungal species, (ii) explore the structure of the plant–plant projected network and (iii) compare plant association patterns in regard to their position along the ecological succession. Our analysis reveals no trade-off between specialization of plants and specialization of their partners and a saturation of the plant projected network. Moreover, there is a significantly lower-than-expected sharing of partners between early- and late-successional plant species, with fewer fungal partners for early-successional ones and similar average specialization of symbionts of early- and late-successional plants. Our work paves the way for ecological readings of Mediterranean landscapes that include the astonishing diversity of below-ground interactions. PMID:26539201

  5. Evidence for recycling of external guide sequences during cleavage of bipartite substrates in vitro by reconstituted archaeal RNase P.

    PubMed

    Cho, I-Ming; Kazakov, Sergei A; Gopalan, Venkat

    2011-02-04

    RNA-mediated RNA cleavage events are being increasingly exploited to disrupt RNA function, an important objective in post-genomic biology. RNase P, a ribonucleoprotein enzyme that catalyzes the removal of 5'-leaders from precursor tRNAs, has previously been utilized for sequence-specific cleavage of cellular RNAs. In one of these strategies, borne out in bacterial and mammalian cell culture, an external guide sequence (EGS) RNA base-paired to a target RNA makes the latter a substrate for endogenous RNase P by rendering the bipartite target RNA-EGS complex a precursor tRNA structural mimic. In this study, we first obtained evidence that four different mesophilic and thermophilic archaeal RNase P holoenzymes, reconstituted in vitro using their respective constituent RNA and protein subunits, recognize and cleave such substrate-EGS complexes. We further demonstrate that these EGSs engage in multiple rounds of substrate recognition while assisting archaeal RNase P-mediated cleavage of a target RNA in vitro. Taken together, the EGS-based approach merits consideration as a gene knockdown tool in archaea.

  6. Tomato chlorotic leaf distortion virus, a new bipartite begomovirus infecting Solanum lycopersicum and Capsicum chinense in Venezuela.

    PubMed

    Zambrano, Karla; Geraud-Pouey, Francis; Chirinos, Doris; Romay, Gustavo; Marys, Edgloris

    2011-12-01

    Virus isolate T217L was obtained from a diseased tomato (Solanum lycopersicum) plant showing leaf deformation and chlorotic mottle symptoms near Maracaibo in the state of Zulia, Venezuela. Full-length DNA-A and DNA-B molecules of T217L were cloned and sequenced. The genome organization of T217L was identical to the bipartite genomes of other begomoviruses described from the Americas. Characteristic disease symptoms were reproduced in S. lycopersicum and Capsicum annum plants inoculated using the cloned viral DNA-A and DNA-B components, confirming disease aetiology. A sequence analysis of DNA-A showed that the T217L isolate has the highest sequence identity (84%) with sida yellow mosaic Yucatan virus (SiYMYuV), sida golden mosaic Honduras virus (SiGMHV) and bean dwarf mosaic virus (BDMV) isolates. This is less than the 89% identity in the DNA-A component that has been defined as the threshold value for the demarcation of species in the genus Begomovirus. The molecular data show that isolate T217L belongs to a novel tentative begomovirus species, for which the name tomato chlorotic leaf distortion virus is proposed. TCLDV was also detected in symptomatic C. chinense plants growing near the T217L-infected plant.

  7. Burning Invariant Manifold Theory and the Bipartite Digraph Representation of Generalized Dynamical System Formed by One-way Barriers

    NASA Astrophysics Data System (ADS)

    Li, John; Mahoney, John; Mitchell, Kevin; Solomon, Tom

    2013-11-01

    The recently developed Burning Invariant Manifold (BIM) theory took a dynamical system approach to understand front propagation in Advection-Reaction-Diffusion systems and successfully predicted both the short-term and asymptotic front behavior by finding the unstable BIMs which act as barriers to front propagation. Unlike separatrices in traditional dynamical system being two-way barriers, the BIMs are one-way barriers. This asymmetry gives rise to a much richer dynamical behavior than traditional dynamical systems. Through numerical simulations, we found that the stable BIMs are the basin boundaries. Based on the properties of BIM theory, we further derived a theory to investigate a dynamical system consists of one-way barriers and the cooperative behavior of these barriers. This theory reveals the global structure of both stable and unstable BIMs by first using a systematic algorithm to convert the flow to a bipartite digraph and then extracting information of the steady states of fronts and corresponding basins of attraction from the digraph. This work was supported by the US National Science Foundation under grant PHY-0748828 and NSF Fellowship DGE-0937362.

  8. Performance of ectomycorrhizal alders exposed to specific Canadian oil sands tailing stressors under in vivo bipartite symbiotic conditions.

    PubMed

    Beaudoin-Nadeau, Martin; Gagné, André; Bissonnette, Cyntia; Bélanger, Pier-Anne; Fortin, J André; Roy, Sébastien; Greer, Charles W; Khasa, Damase P

    2016-07-01

    Canadian oil sands tailings are predominately sodic residues contaminated by hydrocarbons such as naphthenic acids. These conditions are harsh for plant development. In this study, we evaluated the effect of inoculating roots of Alnus viridis ssp. crispa and Alnus incana ssp. rugosa with ectomycorrhizal fungi in the presence of tailings compounds. Seedlings were inoculated with 7 different strains of Paxillus involutus and Alpova diplophloeus and were grown under different treatments of NaCl, Na2SO4, and naphthenic acids in a growth chamber. Afterwards, seedling survival, height, dry biomass, leaf necrosis, and root mycorrhization rate were measured. Paxillus involutus Mai was the most successful strain in enhancing alder survival, health, and growth. Seedlings inoculated with this strain displayed a 25% increase in survival rate, 2-fold greater biomass, and 2-fold less leaf necrosis compared with controls. Contrary to our expectations, A. diplophloeus was not as effective as P. involutus in improving seedling fitness, likely because it did not form ectomycorrhizae on roots of either alder species. High intraspecific variation characterized strains of P. involutus in their ability to stimulate alder height and growth and to minimize leaf necrosis. We conclude that in vivo selection under bipartite symbiotic conditions is essential to select effective strains that will be of use for the revegetation and reclamation of derelict lands.

  9. Energy.

    ERIC Educational Resources Information Center

    Shanebrook, J. Richard

    This document describes a course designed to acquaint students with the many societal and technological problems facing the United States and the world due to the increasing demand for energy. The course begins with a writing assignment that involves readings on the environmental philosophy of Native Americans and the Chernobyl catastrophe.…

  10. A retroviral promoter and a cellular enhancer define a bipartite element which controls env ERVWE1 placental expression.

    PubMed

    Prudhomme, Sarah; Oriol, Guy; Mallet, François

    2004-11-01

    The HERV-W family contains hundreds of loci diversely expressed in several physiological and pathological contexts. A unique locus termed ERVWE1 encodes an envelope glycoprotein (syncytin) involved in hominoid placental physiology. Here we show that syncytin expression is regulated by a bipartite element consisting of a cyclic AMP (cAMP)-inducible long terminal repeat (LTR) retroviral promoter adjacent to a cellular enhancer conferring a high level of expression and placental tropism. Deletion mutant analysis showed that the ERVWE1 5' LTR contains binding sites essential for basal placental activity in the region from positions +1 to +125. The region from positions +125 to +310 represents a cAMP-responsive core HERV-W promoter active in all cell types. Site-directed mutagenesis analysis highlighted the complexity of U3 regulation. ERVWE1 placenta-specific positive (e.g., T240) and negative (e.g., G71) regulatory sites were identified, as were essential sites required for basic activity (e.g., A247). The flanking sequences of the ERVWE1 provirus contain several putative regulatory elements. The upstream HERV-H and HERV-P LTRs were found to be inactive. Conversely, the 436-bp region located between the HERV-P LTR and ERVWE1 was shown to be an upstream regulatory element (URE) which is significantly active in placenta cells. This URE acts as a tissue-specific enhancer. Genetic and functional analyses of hominoid UREs revealed large differences between UREs of members of the Hominidae and the Hylobatidae. These data allowed the identification of a positive regulatory region from positions -436 to -128, a mammalian apparent LTR retrotransposon negative regulatory region from positions -128 to -67, and a trophoblast-specific enhancer (TSE) from positions -67 to -35. Putative AP-2, Sp-1, and GCMa binding sites are essential constituents of the 33-bp TSE.

  11. Populations of Genomic RNAs Devoted to the Replication or Spread of a Bipartite Plant Virus Differ in Genetic Structure▿ †

    PubMed Central

    Lozano, Gloria; Grande-Pérez, Ana; Navas-Castillo, Jesús

    2009-01-01

    RNA viruses within a host exist as dynamic distributions of closely related mutants and recombinant genomes. These closely related mutants and recombinant genomes, which are subjected to a continuous process of genetic variation, competition, and selection, act as a unit of selection, termed viral quasispecies. Characterization of mutant spectra within hosts is essential for understanding viral evolution and pathogenesis resulting from the cooperative behavior of viral mutants within viral quasispecies. Furthermore, a detailed analysis of viral variability within hosts is needed to design control strategies, because viral quasispecies are reservoirs of viral variants that potentially can emerge with increased virulence or altered tropism. In this work, we report a detailed analysis of within-host viral populations in 13 field isolates of the bipartite Tomato chlorosis virus (ToCV) (genus Crinivirus, family Closteroviridae). The intraisolate genetic structure was analyzed based on sequencing data for 755 molecular clones distributed in four genomic regions within the RNA-dependent RNA polymerase (RNA1) and Hsp70h, CP, and CPm (RNA2) open reading frames. Our results showed that populations of ToCV within a host plant have a heterogeneous and complex genetic structure similar to that described for animal and plant RNA viral quasispecies. Moreover, the structures of these populations clearly differ depending on the RNA segment considered, being more complex for RNA1 (encoding replication-associated proteins) than for RNA2 (encoding encapsidation-, systemic-movement-, and insect transmission-relevant proteins). These results support the idea that, in multicomponent RNA viruses, function can generate profound differences in the genetic structures of the different genomic segments. PMID:19793810

  12. The Effects of Projected Future Demand Including Very Light Jet Air-Taxi Operations on U.S. National Airspace System Delays as a Function of Next Generation Air Transportation System Airspace Capacity

    NASA Technical Reports Server (NTRS)

    Smith, Jerry; Viken, Jeff; Dollyhigh, Samuel; Trani, Antonio; Baik, Hojong; Hinze, Nicholas; Ashiabor, Senanu

    2007-01-01

    This paper presents the results from a study which investigates the potential effects of the growth in air traffic demand including projected Very Light Jet (VLJ) air-taxi operations adding to delays experienced by commercial passenger air transportation in the year 2025. The geographic region studied is the contiguous United States (U.S.) of America, although international air traffic to and from the U.S. is included. The main focus of this paper is to determine how much air traffic growth, including VLJ air-taxi operations will add to enroute airspace congestion and determine what additional airspace capacity will be needed to accommodate the expected demand. Terminal airspace is not modeled and increased airport capacity is assumed.

  13. Bioinformatic analysis reveals genome size reduction and the emergence of tyrosine phosphorylation site in the movement protein of New World bipartite begomoviruses.

    PubMed

    Ho, Eric S; Kuchie, Joan; Duffy, Siobain

    2014-01-01

    Begomovirus (genus Begomovirus, family Geminiviridae) infection is devastating to a wide variety of agricultural crops including tomato, squash, and cassava. Thus, understanding the replication and adaptation of begomoviruses has important translational value in alleviating substantial economic loss, particularly in developing countries. The bipartite genome of begomoviruses prevalent in the New World and their counterparts in the Old World share a high degree of genome homology except for a partially overlapping reading frame encoding the pre-coat protein (PCP, or AV2). PCP contributes to the essential functions of intercellular movement and suppression of host RNA silencing, but it is only present in the Old World viruses. In this study, we analyzed a set of non-redundant bipartite begomovirus genomes originating from the Old World (N = 28) and the New World (N = 65). Our bioinformatic analysis suggests ∼ 120 nucleotides were deleted from PCP's proximal promoter region that may have contributed to its loss in the New World viruses. Consequently, genomes of the New World viruses are smaller than the Old World counterparts, possibly compensating for the loss of the intercellular movement functions of PCP. Additionally, we detected substantial purifying selection on a portion of the New World DNA-B movement protein (MP, or BC1). Further analysis of the New World MP gene revealed the emergence of a putative tyrosine phosphorylation site, which likely explains the increased purifying selection in that region. These findings provide important information about the strategies adopted by bipartite begomoviruses in adapting to new environment and suggest future in planta experiments.

  14. Bipartite Topology of Treponema pallidum Repeat Proteins C/D and I: OUTER MEMBRANE INSERTION, TRIMERIZATION, AND PORIN FUNCTION REQUIRE A C-TERMINAL β-BARREL DOMAIN.

    PubMed

    Anand, Arvind; LeDoyt, Morgan; Karanian, Carson; Luthra, Amit; Koszelak-Rosenblum, Mary; Malkowski, Michael G; Puthenveetil, Robbins; Vinogradova, Olga; Radolf, Justin D

    2015-05-08

    We previously identified Treponema pallidum repeat proteins TprC/D, TprF, and TprI as candidate outer membrane proteins (OMPs) and subsequently demonstrated that TprC is not only a rare OMP but also forms trimers and has porin activity. We also reported that TprC contains N- and C-terminal domains (TprC(N) and TprC(C)) orthologous to regions in the major outer sheath protein (MOSP(N) and MOSP(C)) of Treponema denticola and that TprC(C) is solely responsible for β-barrel formation, trimerization, and porin function by the full-length protein. Herein, we show that TprI also possesses bipartite architecture, trimeric structure, and porin function and that the MOSP(C)-like domains of native TprC and TprI are surface-exposed in T. pallidum, whereas their MOSP(N)-like domains are tethered within the periplasm. TprF, which does not contain a MOSP(C)-like domain, lacks amphiphilicity and porin activity, adopts an extended inflexible structure, and, in T. pallidum, is tightly bound to the protoplasmic cylinder. By thermal denaturation, the MOSP(N) and MOSP(C)-like domains of TprC and TprI are highly thermostable, endowing the full-length proteins with impressive conformational stability. When expressed in Escherichia coli with PelB signal sequences, TprC and TprI localize to the outer membrane, adopting bipartite topologies, whereas TprF is periplasmic. We propose that the MOSP(N)-like domains enhance the structural integrity of the cell envelope by anchoring the β-barrels within the periplasm. In addition to being bona fide T. pallidum rare outer membrane proteins, TprC/D and TprI represent a new class of dual function, bipartite bacterial OMP.

  15. Bioinformatic Analysis Reveals Genome Size Reduction and the Emergence of Tyrosine Phosphorylation Site in the Movement Protein of New World Bipartite Begomoviruses

    PubMed Central

    Ho, Eric S.; Kuchie, Joan; Duffy, Siobain

    2014-01-01

    Begomovirus (genus Begomovirus, family Geminiviridae) infection is devastating to a wide variety of agricultural crops including tomato, squash, and cassava. Thus, understanding the replication and adaptation of begomoviruses has important translational value in alleviating substantial economic loss, particularly in developing countries. The bipartite genome of begomoviruses prevalent in the New World and their counterparts in the Old World share a high degree of genome homology except for a partially overlapping reading frame encoding the pre-coat protein (PCP, or AV2). PCP contributes to the essential functions of intercellular movement and suppression of host RNA silencing, but it is only present in the Old World viruses. In this study, we analyzed a set of non-redundant bipartite begomovirus genomes originating from the Old World (N = 28) and the New World (N = 65). Our bioinformatic analysis suggests ∼120 nucleotides were deleted from PCP’s proximal promoter region that may have contributed to its loss in the New World viruses. Consequently, genomes of the New World viruses are smaller than the Old World counterparts, possibly compensating for the loss of the intercellular movement functions of PCP. Additionally, we detected substantial purifying selection on a portion of the New World DNA-B movement protein (MP, or BC1). Further analysis of the New World MP gene revealed the emergence of a putative tyrosine phosphorylation site, which likely explains the increased purifying selection in that region. These findings provide important information about the strategies adopted by bipartite begomoviruses in adapting to new environment and suggest future in planta experiments. PMID:25383632

  16. Fronto-facial advancement and bipartition in Crouzon-Pfeiffer and Apert syndromes: Impact of fronto-facial surgery upon orbital and airway parameters in FGFR2 syndromes.

    PubMed

    Khonsari, Roman H; Way, Benjamin; Nysjö, Johan; Odri, Guillaume A; Olszewski, Raphaël; Evans, Robert D; Dunaway, David J; Nyström, Ingela; Britto, Jonathan A

    2016-10-01

    A major concern in FGFR2 craniofaciosynostosis is oculo-orbital disproportion, such that orbital malformation provides poor accommodation and support for the orbital contents and peri-orbita, leading to insufficient eyelid closure, corneal exposure and eventually to functional visual impairment. Fronto-facial monobloc osteotomy followed by distraction osteogenesis aims to correct midfacial growth deficiencies in Crouzon-Pfeiffer syndrome patients. Fronto-facial bipartition osteotomy followed by distraction is a procedure of choice in Apert syndrome patients. These procedures modify the shape and volume of the orbit and tend to correct oculo-orbital disproportion. Little is known about the detailed 3D shape of the orbital phenotype in CPS and AS, and about how this is modified by fronto-facial surgery. Twenty-eight patients with CMS, 13 patients with AS and 40 control patients were included. CT scans were performed before and after fronto-facial surgery. Late post-operative scans were available for the Crouzon-Pfeiffer syndrome group. Orbital morphology was investigated using conventional three-dimensional cephalometry and shape analysis after mesh-based segmentation of the orbital contents. We characterized the 3D morphology of CPS and AS orbits and showed how orbital shape is modified by surgery. We showed that monobloc-distraction in CPS and bipartition-distraction in AS specifically address the morphological characteristics of the two syndromes.

  17. Chemical structure elucidation from ¹³C NMR chemical shifts: efficient data processing using bipartite matching and maximal clique algorithms.

    PubMed

    Koichi, Shungo; Arisaka, Masaki; Koshino, Hiroyuki; Aoki, Atsushi; Iwata, Satoru; Uno, Takeaki; Satoh, Hiroko

    2014-04-28

    Computer-assisted chemical structure elucidation has been intensively studied since the first use of computers in chemistry in the 1960s. Most of the existing elucidators use a structure-spectrum database to obtain clues about the correct structure. Such a structure-spectrum database is expected to grow on a daily basis. Hence, the necessity to develop an efficient structure elucidation system that can adapt to the growth of a database has been also growing. Therefore, we have developed a new elucidator using practically efficient graph algorithms, including the convex bipartite matching, weighted bipartite matching, and Bron-Kerbosch maximal clique algorithms. The utilization of the two matching algorithms especially is a novel point of our elucidator. Because of these sophisticated algorithms, the elucidator exactly produces a correct structure if all of the fragments are included in the database. Even if not all of the fragments are in the database, the elucidator proposes relevant substructures that can help chemists to identify the actual chemical structures. The elucidator, called the CAST/CNMR Structure Elucidator, plays a complementary role to the CAST/CNMR Chemical Shift Predictor, and together these two functions can be used to analyze the structures of organic compounds.

  18. THE PROFITS AND PERILS OF PUBLICITY: ALLGEMEINE LITERATUR- ZEITUNG, THE THURN UND TAXIS POST, AND THE PERIODICAL TRADE AT THE END OF THE EIGHTEENTH CENTURY.

    PubMed

    Broman, Thomas

    2015-09-20

    Recent historiography on the growth of periodical publishing has emphasized newspapers and journals as constituents of an emergent communications system in early modern Europe. This system comprised the newspapers, journals and other publications that contributed its content, and also the postal systems that were the principal method of distributing that content. This article describes how the growth of this system in central Europe was supported in large measure by financial incentives that it offered to both constituents. First, in contrast with postal systems in France and the UK, the Thurn und Taxis Reichspost inserted itself as a middleman in the sale of periodicals, which gave the Reichspost an incentive to promote the trade. Second, the financial conditions for periodical publication made their costs depend more heavily on costs that were scalable to circulation than is true today, which resulted in the viability of publications with a lower circulation. The same cost structure also made it possible for certain prominent periodicals of the era to earn considerable profits for their publishers, as illustrated in this article by Allgemeine Literatur-Zeitung, which was published in Jena from 1785.

  19. Development of neuronal and sensorimotor systems in the absence of gravity: Neurobiological research on four soyuz taxi flights to the international space station

    NASA Astrophysics Data System (ADS)

    Horn, Eberhard R.; Dournon, Christian; Frippiat, Jean-Pol; Marco, Roberto; Böser, Sybille; Kirschnick, Uta

    2007-09-01

    Neurobiological experiments on 4 animal species (Xenopus laevis, Pleurodeles waltl, Drosophila melanogaster, Acheta domesticus) were performed to study effects of microgravity on development and aging of neuronal, sensory and motor systems. Animal models were selected according to their suitability to answer questions concerning μg-effects on neuroanatomy, neuronal activity, and behaviour. The studies were performed on the Soyuz Taxi flights Andromède, Cervantes, Eneide and LDM-TMA8/TMA7. Observations from these flights include: (1) In tadpoles and cricket larvae, morphological features of sensory cells and neurons are rarely affected by microgravity. (2) In crickets, in-flight fertilization was successful; after landing, flight larvae hatched earlier than ground reared siblings. (3) In crickets, proliferation of peptidergic neurons and their projection patterns within the nervous system were not affected by microgravity. (4) During aging, the impact of microgravity on peptidergic neurons of male Drosophila was limited to the size of cell body. (5) In Xenopus, neurophysiological features of the spinal motor system during fictive swimming were partially modified. (6) In Xenopus tadpoles, the vestibuloocular reflex was affected in an age-related manner. Modifications were also related to the occurrence of a tail lordosis induced by microgravity. It is concluded that adaptation to microgravity during development and aging is mainly based on physiological mechanisms within the central nervous system while structural modifications of the sensory and neuronal system contribute less.

  20. The profits and perils of publicity: Allgemeine Literatur-Zeitung, the Thurn und Taxis Post, and the periodical trade at the end of the eighteenth century

    PubMed Central

    Broman, Thomas

    2015-01-01

    Recent historiography on the growth of periodical publishing has emphasized newspapers and journals as constituents of an emergent communications system in early modern Europe. This system comprised the newspapers, journals and other publications that contributed its content, and also the postal systems that were the principal method of distributing that content. This article describes how the growth of this system in central Europe was supported in large measure by financial incentives that it offered to both constituents. First, in contrast with postal systems in France and the UK, the Thurn und Taxis Reichspost inserted itself as a middleman in the sale of periodicals, which gave the Reichspost an incentive to promote the trade. Second, the financial conditions for periodical publication made their costs depend more heavily on costs that were scalable to circulation than is true today, which resulted in the viability of publications with a lower circulation. The same cost structure also made it possible for certain prominent periodicals of the era to earn considerable profits for their publishers, as illustrated in this article by Allgemeine Literatur-Zeitung, which was published in Jena from 1785. PMID:26495577

  1. Bipartite Composite Fermion States

    NASA Astrophysics Data System (ADS)

    Sreejith, G. J.; Tőke, C.; Wójs, A.; Jain, J. K.

    2011-08-01

    We study a class of ansatz wave functions in which composite fermions form two correlated “partitions.” These “bipartite” composite fermion states are demonstrated to be very accurate for electrons in a strong magnetic field interacting via a short-range 3-body interaction potential over a broad range of filling factors. Furthermore, this approach gives accurate approximations for the exact Coulomb ground state at 2+3/5 and 2+4/7 and is thus a promising candidate for the observed fractional quantum Hall states at the hole conjugate fractions at 2+2/5 and 2+3/7.

  2. ElectroTaxis-on-a-Chip (ETC): an integrated quantitative high-throughput screening platform for electrical field-directed cell migration.

    PubMed

    Zhao, Siwei; Zhu, Kan; Zhang, Yan; Zhu, Zijie; Xu, Zhengping; Zhao, Min; Pan, Tingrui

    2014-11-21

    Both endogenous and externally applied electrical stimulation can affect a wide range of cellular functions, including growth, migration, differentiation and division. Among those effects, the electrical field (EF)-directed cell migration, also known as electrotaxis, has received broad attention because it holds great potential in facilitating clinical wound healing. Electrotaxis experiment is conventionally conducted in centimetre-sized flow chambers built in Petri dishes. Despite the recent efforts to adapt microfluidics for electrotaxis studies, the current electrotaxis experimental setup is still cumbersome due to the needs of an external power supply and EF controlling/monitoring systems. There is also a lack of parallel experimental systems for high-throughput electrotaxis studies. In this paper, we present a first independently operable microfluidic platform for high-throughput electrotaxis studies, integrating all functional components for cell migration under EF stimulation (except microscopy) on a compact footprint (the same as a credit card), referred to as ElectroTaxis-on-a-Chip (ETC). Inspired by the R-2R resistor ladder topology in digital signal processing, we develop a systematic approach to design an infinitely expandable microfluidic generator of EF gradients for high-throughput and quantitative studies of EF-directed cell migration. Furthermore, a vacuum-assisted assembly method is utilized to allow direct and reversible attachment of our device to existing cell culture media on biological surfaces, which separates the cell culture and device preparation/fabrication steps. We have demonstrated that our ETC platform is capable of screening human cornea epithelial cell migration under the stimulation of an EF gradient spanning over three orders of magnitude. The screening results lead to the identification of the EF-sensitive range of that cell type, which can provide valuable guidance to the clinical application of EF-facilitated wound healing.

  3. ElectroTaxis-on-a-Chip (ETC): an integrated quantitative high-throughput screening platform for electrical field-directed cell migration†

    PubMed Central

    Zhao, Siwei; Zhu, Kan; Zhang, Yan; Zhu, Zijie; Xu, Zhengping

    2015-01-01

    Both endogenous and externally applied electrical stimulation can affect a wide range of cellular functions, including growth, migration, differentiation and division. Among those effects, the electrical field (EF)-directed cell migration, also known as electrotaxis, has received broad attention because it holds great potential in facilitating clinical wound healing. Electrotaxis experiment is conventionally conducted in centimetre-sized flow chambers built in Petri dishes. Despite the recent efforts to adapt microfluidics for electrotaxis studies, the current electrotaxis experimental setup is still cumbersome due to the needs of an external power supply and EF controlling/monitoring systems. There is also a lack of parallel experimental systems for high-throughput electrotaxis studies. In this paper, we present a first independently operable microfluidic platform for high-throughput electrotaxis studies, integrating all functional components for cell migration under EF stimulation (except microscopy) on a compact footprint (the same as a credit card), referred to as ElectroTaxis-on-a-Chip (ETC). Inspired by the R–2R resistor ladder topology in digital signal processing, we develop a systematic approach to design an infinitely expandable microfluidic generator of EF gradients for high-throughput and quantitative studies of EF-directed cell migration. Furthermore, a vacuum-assisted assembly method is utilized to allow direct and reversible attachment of our device to existing cell culture media on biological surfaces, which separates the cell culture and device preparation/fabrication steps. We have demonstrated that our ETC platform is capable of screening human cornea epithelial cell migration under the stimulation of an EF gradient spanning over three orders of magnitude. The screening results lead to the identification of the EF-sensitive range of that cell type, which can provide valuable guidance to the clinical application of EF-facilitated wound healing

  4. Yang-Lee edge singularities from extended activity expansions of the dimer density for bipartite lattices of dimensionality 2 ≤ d ≤ 7.

    PubMed

    Butera, P; Pernici, M

    2012-07-01

    We have extended, in most cases through 24th order, the series expansions of the dimer density in powers of the activity in the case of bipartite [(hyper)-simple-cubic and (hyper)-body-centered-cubic] lattices of dimensionalities 2 ≤ d ≤ 7. A numerical analysis of these data yields estimates of the exponents characterizing the Yang-Lee edge singularities for lattice ferromagnetic spin models as d varies between the lower and the upper critical dimensionalities. Our results are consistent with, but more extensive and sometimes more accurate than, those obtained from the existing dimer series or from the estimates of related exponents for lattice animals, branched polymers, and fluids. We mention also that it is possible to obtain estimates of the dimer constants from our series for the various lattices.

  5. Bipartite life cycle of coral reef fishes promotes increasing shape disparity of the head skeleton during ontogeny: an example from damselfishes (Pomacentridae)

    PubMed Central

    2011-01-01

    Background Quantitative studies of the variation of disparity during ontogeny exhibited by the radiation of coral reef fishes are lacking. Such studies dealing with the variation of disparity, i.e. the diversity of organic form, over ontogeny could be a first step in detecting evolutionary mechanisms in these fishes. The damselfishes (Pomacentridae) have a bipartite life-cycle, as do the majority of demersal coral reef fishes. During their pelagic dispersion phase, all larvae feed on planktonic prey. On the other hand, juveniles and adults associated with the coral reef environment show a higher diversity of diets. Using geometric morphometrics, we study the ontogenetic dynamic of shape disparity of different head skeletal units (neurocranium, suspensorium and opercle, mandible and premaxilla) in this fish family. We expected that larvae of different species might be relatively similar in shapes. Alternatively, specialization may become notable even in the juvenile and adult phase. Results The disparity levels increase significantly throughout ontogeny for each skeletal unit. At settlement, all larval shapes are already species-specific. Damselfishes show high levels of ontogenetic allometry during their post-settlement growth. The divergence of allometric patterns largely explains the changes in patterns and levels of shape disparity over ontogeny. The rate of shape change and the length of ontogenetic trajectories seem to be less variable among species. We also show that the high levels of shape disparity at the adult stage are correlated to a higher level of ecological and functional diversity in this stage. Conclusion Diversification throughout ontogeny of damselfishes results from the interaction among several developmental novelties enhancing disparity. The bipartite life-cycle of damselfishes exemplifies a case where the variation of environmental factors, i.e. the transition from the more homogeneous oceanic environment to the coral reef offering a wide

  6. Taxis equations for amoeboid cells.

    PubMed

    Erban, Radek; Othmer, Hans G

    2007-06-01

    The classical macroscopic chemotaxis equations have previously been derived from an individual-based description of the tactic response of cells that use a "run-and-tumble" strategy in response to environmental cues [17,18]. Here we derive macroscopic equations for the more complex type of behavioral response characteristic of crawling cells, which detect a signal, extract directional information from a scalar concentration field, and change their motile behavior accordingly. We present several models of increasing complexity for which the derivation of population-level equations is possible, and we show how experimentally measured statistics can be obtained from the transport equation formalism. We also show that amoeboid cells that do not adapt to constant signals can still aggregate in steady gradients, but not in response to periodic waves. This is in contrast to the case of cells that use a "run-and-tumble" strategy, where adaptation is essential.

  7. Phosphate taxis in Pseudomonas aeruginosa.

    PubMed

    Kato, J; Ito, A; Nikata, T; Ohtake, H

    1992-08-01

    Pseudomonas aeruginosa was shown to be attracted to phosphate. The chemotactic response was induced by phosphate starvation. The specificity of chemoreceptors for phosphate was high so that no other tested phosphorus compounds elicited a chemotactic response as strong as that elicited by phosphate. Competition experiments showed that the chemoreceptors for phosphate appeared to be different from those for the common amino acids. Mutants constitutive for alkaline phosphatase showed the chemotactic response to phosphate regardless of whether the cells were starved for phosphate.

  8. Spatial Representations of Taxi Drivers.

    DTIC Science & Technology

    1982-09-28

    some people have suggested that adults, when they learn a new environment, proceed through these same Piagetian Stages in their representations...East Green Street Naval Postgraduate School Pasadena, CA 91101 Monterey, CA 93940 1 Special Asst. for Education and I Dr. Robert Wisher Training (OP-O1E...Research Laborat Pensacola, FL 32508 1 Dr. Gary Poock Operations Research Department Code 55PK Naval Postgraduate School Monterey, CA 93940 1 Roger W

  9. Bipartite electronic superstructures in the vortex core of Bi2Sr2CaCu2O8+δ

    PubMed Central

    Machida, T.; Kohsaka, Y.; Matsuoka, K.; Iwaya, K.; Hanaguri, T.; Tamegai, T.

    2016-01-01

    The central issue in the physics of cuprate superconductivity is the mutual relationship among superconductivity, pseudogap and broken-spatial-symmetry states. A magnetic field B suppresses superconductivity, providing an opportunity to investigate the competition among these states. Although various B-induced electronic superstructures have been reported, their energy, spatial and momentum-space structures are unclear. Here, we show using spectroscopic-imaging scanning tunnelling microscopy on Bi2Sr2CaCu2O8+δ that there are two distinct B-induced electronic superstructures, both being localized in the vortex core but appearing at different energies. In the low-energy range where the nodal Bogoliubov quasiparticles are well-defined, we observe the so-called vortex checkerboard that we identify as the B-enhanced quasiparticle interference pattern. By contrast, in the high-energy region where the pseudogap develops, the broken-spatial-symmetry patterns that pre-exist at B=0 T is locally enhanced in the vortex core. This evidences the competition between superconductivity and the broken-spatial-symmetry state that is associated with the pseudogap. PMID:27230420

  10. Heterotrimeric kinesin-II is necessary and sufficient to promote different stepwise assembly of morphologically distinct bipartite cilia in Drosophila antenna

    PubMed Central

    Jana, Swadhin C.; Girotra, Mukul; Ray, Krishanu

    2011-01-01

    Structurally diverse sensory cilia have evolved from primary cilia, a microtubule-based cellular extension engaged in chemical and mechanical sensing and signal integration. The diversity is often associated with functional specialization. The olfactory receptor neurons in Drosophila, for example, express three distinct bipartite cilia displaying different sets of olfactory receptors on them. Molecular description underlying their assembly and diversification is still incomplete. Here, we show that the branched and the slender olfactory cilia develop in two distinct step-wise patterns through the pupal stages before the expression of olfactory receptor genes in olfactory neurons. The process initiates with a thin procilium growth from the dendrite apex, followed by volume increment in successive stages. Mutations in the kinesin-II subunit genes either eliminate or restrict the cilia growth as well as tubulin entry into the developing cilia. Together with previous results, our results here suggest that heterotrimeric kinesin-II is the primary motor engaged in all type-I sensory cilia assembly in Drosophila and that the cilia structure diversity is achieved through additional transports supported by the motor during development. PMID:21233284

  11. Involvement of a Putative Bipartite Transit Peptide in Targeting Rice Pheophorbide a Oxygenase into Chloroplasts for Chlorophyll Degradation during Leaf Senescence.

    PubMed

    Xie, Qingjun; Liang, Yan; Zhang, Jian; Zheng, Huakun; Dong, Guojun; Qian, Qian; Zuo, Jianru

    2016-03-20

    Leaf senescence is one of the major factors contributing to the productivity and the grain quality in crops. The regulatory mechanism of leaf senescence remains largely unknown. Here, we report the identification and characterization of a rice early senescence 1 (eas1) mutant, which displayed an early leaf senescence phenotype, accompanying by dwarfism and reduced tiller number, eventually leading to the reduction of grain yield. Map-based cloning revealed that the nuclear gene EAS1 encodes a pheophorbide a oxygenase (PaO), a key enzyme for chlorophyll breakdown. A highly conserved Thr residue of PaO was mutated into Ile in the eas1 mutant. Phylogenetic analysis indicates that PaO is an evolutionarily conserved protein, and EAS1 is 68% identical to the Arabidopsis ACCERLERATED CELL DEATH (ACD1) protein. Unlike ACD1 that contains a single transit peptide, EAS1 contains two putative transit peptides at its N-terminus, which are essential for its functionality, suggesting that targeting of EAS1 to the chloroplast is likely mediated by a putative bipartite transit peptide. Consistently, only a short version of EAS1 lacking the first putative transit peptide, but not the full-length EAS1, was capable of rescuing the Arabidopsis acd1 mutant phenotype. These results suggest that rice EAS1 represents a functional PaO, which is involved in chlorophyll degradation and may utilize a unique mechanism for its import into the chloroplast.

  12. Magnetization process, bipartite entanglement, and enhanced magnetocaloric effect of the exactly solved spin-1/2 Ising-Heisenberg tetrahedral chain.

    PubMed

    Strečka, Jozef; Rojas, Onofre; Verkholyak, Taras; Lyra, Marcelo L

    2014-02-01

    The frustrated spin-1/2 Ising-Heisenberg ladder with Heisenberg intra-rung and Ising inter-rung interactions is exactly solved in a longitudinal magnetic field by taking advantage of the local conservation of the total spin on each rung and the transfer-matrix method. We have rigorously calculated the ground-state phase diagram, magnetization process, magnetocaloric effect, and basic thermodynamic quantities for the model, which can be alternatively viewed as an Ising-Heisenberg tetrahedral chain. It is demonstrated that a stepwise magnetization curve with an intermediate plateau at half of the saturation magnetization is also reflected in respective stepwise changes of the concurrence serving as a measure of bipartite entanglement. The ground-state phase diagram and zero-temperature magnetization curves of the Ising-Heisenberg tetrahedral chain are contrasted with the analogous results of the purely quantum Heisenberg tetrahedral chain, which have been obtained through density-matrix renormalization group (DMRG) calculations. While both ground-state phase diagrams fully coincide in the regime of weak inter-rung interaction, the purely quantum Heisenberg tetrahedral chain develops Luttinger spin-liquid and Haldane phases for strongly coupled rungs, which are absent in the Ising-Heisenberg counterpart model.

  13. Development of a bipartite ecdysone-responsive gene switch for the oomycete Phytophthora infestans and its use to manipulate transcription during axenic culture and plant infection.

    PubMed

    Gamboa-Meléndez, Heber; Judelson, Howard S

    2015-01-01

    Conditional expression systems have been proven to be useful tools for the elucidation of gene function in many taxa. Here, we report the development of the first useful inducible promoter system for an oomycete, based on an ecdysone receptor (EcR) and the ecdysone analogue methoxyfenozide. In Phytophthora infestans, the potato late blight pathogen, a monopartite transactivator containing the VP16 activation domain from herpes simplex virus, the GAL4 DNA-binding domain from yeast and the EcR receptor domain from the spruce budworm enabled high levels of expression of a β-glucuronidase (GUS) reporter gene, but unacceptable basal activity in the absence of the methoxyfenozide inducer. Greatly improved performance was obtained using a bipartite system in which transcription is activated by a heterodimer between a chimera of VP16 and the migratory locust retinoid X receptor, and a separate EcR-DNA-binding domain chimera. Transformants were obtained that exhibited >100-fold activation of the reporter by methoxyfenozide, with low basal levels of expression and induced activity approaching that of the strong ham34 promoter. Performance varied between transformants, probably as a result of position effects. The addition of methoxyfenozide enabled strong induction during hyphal growth, zoosporogenesis and colonization of tomato. No significant effects of the inducer or transactivators on growth, development or pathogenicity were observed. The technology should therefore be a useful addition to the arsenal of methods for the study of oomycete plant pathogens.

  14. Human ERCC5 cDNA-cosmid complementation for excision repair and bipartite amino acid domains conserved with RAD proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe.

    PubMed Central

    MacInnes, M A; Dickson, J A; Hernandez, R R; Learmonth, D; Lin, G Y; Mudgett, J S; Park, M S; Schauer, S; Reynolds, R J; Strniste, G F

    1993-01-01

    Several human genes related to DNA excision repair (ER) have been isolated via ER cross-species complementation (ERCC) of UV-sensitive CHO cells. We have now isolated and characterized cDNAs for the human ERCC5 gene that complement CHO UV135 cells. The ERCC5 mRNA size is about 4.6 kb. Our available cDNA clones are partial length, and no single clone was active for UV135 complementation. When cDNAs were mixed pairwise with a cosmid clone containing an overlapping 5'-end segment of the ERCC5 gene, DNA transfer produced UV-resistant colonies with 60 to 95% correction of UV resistance relative to either a genomic ERCC5 DNA transformant or the CHO AA8 progenitor cells. cDNA-cosmid transformants regained intermediate levels (20 to 45%) of ER-dependent reactivation of a UV-damaged pSVCATgpt reporter plasmid. Our evidence strongly implicates an in situ recombination mechanism in cDNA-cosmid complementation for ER. The complete deduced amino acid sequence of ERCC5 was reconstructed from several cDNA clones encoding a predicted protein of 1,186 amino acids. The ERCC5 protein has extensive sequence similarities, in bipartite domains A and B, to products of RAD repair genes of two yeasts, Saccharomyces cerevisiae RAD2 and Schizosaccharomyces pombe rad13. Sequence, structural, and functional data taken together indicate that ERCC5 and its relatives are probable functional homologs. A second locus represented by S. cerevisiae YKL510 and S. pombe rad2 genes is structurally distinct from the ERCC5 locus but retains vestigial A and B domain similarities. Our analyses suggest that ERCC5 is a nuclear-localized protein with one or more highly conserved helix-loop-helix segments within domains A and B. Images PMID:8413238

  15. Human ERCC5 cDNA-cosmid complementation for excision repair and bipartite amino acid domains conserved with RAD proteins of saccharomyces cerevisiae and schizosaccharomyces pombe

    SciTech Connect

    MacInnes, M.A.; Dickson, J.A.; Hernandez, R.R.; Lin, G.Y.; Park, M.S.; Schauer, S.; Reynolds, R.J.; Strniste, G.F. ); Learmonth, D. ); Mudgett, J.S. ); Yu, J.Y. )

    1993-10-01

    Several human genes related to DNA excision repair (ER) have been isolated via ER cross-species complementation (ERCC) of UV-sensitive CHO cells. The authors have now isolated and characterized cDNAs for the human ERCC5 gene that complement CHO UV135 cells. The ERCC5 mRNA size is about 4.6 kb. Their available cDNA clones are partial length, and no single clone was active for UV135 complementation. When cDNAs were mixed pairwise with a cosmid clone containing an overlapping 5[prime]-end segment of the ERCC5 gene, DNA transfer produced UV-resistant colonies with 60 to 95% correction of UV resistance relative to either a genomic ERCC5 DNA transformant or the CHO AA8 progenitor cells. cDNA-cosmid transformants regained intermediate levels (20 to 45%) of ER-dependent reactivation of a UV-damaged pSVCATgpt reporter plasmid. Their evidence strongly implicates an in situ recombination mechanism in cDNA-cosmid complementation for ER. The complete deduced amino acid sequence of ERCC5 was reconstructed for several cDNA clones encoding a predicted protein of 1,186 amino acids. The ERCC5 protein has extensive sequence similarities, in bipartite domains A and B, to products of RAD repair genes of two yeast, Saccharomyces cerevisiae RAD2 and Schizosaccharomyces pombe rad13. Sequence, structural, and functional data taken together indicate that ERCC5 and its relatives are probable functional homologs. A second locus represented by S. cerevisiae YKL510 and S. pombe rad2 genes is structurally distinct from the ERCC5 locus but retains vestigial A and B domain similarities. Their analyses suggest that ERCC5 is a nuclear-localized protein with one or more highly conserved helix-loop-helix segments within domains A and B. 69 refs., 6 figs., 1 tab.

  16. TprC/D (Tp0117/131), a Trimeric, Pore-Forming Rare Outer Membrane Protein of Treponema pallidum, Has a Bipartite Domain Structure

    PubMed Central

    Anand, Arvind; Luthra, Amit; Dunham-Ems, Star; Caimano, Melissa J.; Karanian, Carson; LeDoyt, Morgan; Cruz, Adriana R.; Salazar, Juan C.

    2012-01-01

    Identification of Treponema pallidum rare outer membrane proteins (OMPs) has been a longstanding objective of syphilis researchers. We recently developed a consensus computational framework that employs a battery of cellular localization and topological prediction tools to generate ranked clusters of candidate rare OMPs (D. L. Cox et al., Infect. Immun. 78:5178–5194, 2010). TP0117/TP0131 (TprC/D), a member of the T. pallidum repeat (Tpr) family, was a highly ranked candidate. Circular dichroism, heat modifiability by SDS-PAGE, Triton X-114 phase partitioning, and liposome incorporation confirmed that full-length, recombinant TprC (TprCFl) forms a β-barrel capable of integrating into lipid bilayers. Moreover, TprCFl increased efflux of terbium-dipicolinic acid complex from large unilamellar vesicles and migrated as a trimer by blue-native PAGE. We found that in T. pallidum, TprC is heat modifiable, trimeric, expressed in low abundance, and, based on proteinase K accessibility and opsonophagocytosis assays, surface exposed. From these collective data, we conclude that TprC is a bona fide rare OMP as well as a functional ortholog of Escherichia coli OmpF. We also discovered that TprC has a bipartite architecture consisting of a soluble N-terminal portion (TprCN), presumably periplasmic and bound directly or indirectly to peptidoglycan, and a C-terminal β-barrel (TprCC). Syphilitic rabbits generate antibodies exclusively against TprCC, while secondary syphilis patients fail to mount a detectable antibody response against either domain. The syphilis spirochete appears to have resolved a fundamental dilemma arising from its extracellular lifestyle, namely, how to enhance OM permeability without increasing its vulnerability to the antibody-mediated defenses of its natural human host. PMID:22389487

  17. East African cassava mosaic-like viruses from Africa to Indian ocean islands: molecular diversity, evolutionary history and geographical dissemination of a bipartite begomovirus

    PubMed Central

    2012-01-01

    Background Cassava (Manihot esculenta) is a major food source for over 200 million sub-Saharan Africans. Unfortunately, its cultivation is severely hampered by cassava mosaic disease (CMD). Caused by a complex of bipartite cassava mosaic geminiviruses (CMG) species (Family: Geminivirideae; Genus: Begomovirus) CMD has been widely described throughout Africa and it is apparent that CMG's are expanding their geographical distribution. Determining where and when CMG movements have occurred could help curtail its spread and reveal the ecological and anthropic factors associated with similar viral invasions. We applied Bayesian phylogeographic inference and recombination analyses to available and newly described CMG sequences to reconstruct a plausible history of CMG diversification and migration between Africa and South West Indian Ocean (SWIO) islands. Results The isolation and analysis of 114 DNA-A and 41 DNA-B sequences demonstrated the presence of three CMG species circulating in the Comoros and Seychelles archipelagos (East African cassava mosaic virus, EACMV; East African cassava mosaic Kenya virus, EACMKV; and East African cassava mosaic Cameroon virus, EACMCV). Phylogeographic analyses suggest that CMG’s presence on these SWIO islands is probably the result of at least four independent introduction events from mainland Africa occurring between 1988 and 2009. Amongst the islands of the Comoros archipelago, two major migration pathways were inferred: One from Grande Comore to Mohéli and the second from Mayotte to Anjouan. While only two recombination events characteristic of SWIO islands isolates were identified, numerous re-assortments events were detected between EACMV and EACMKV, which seem to almost freely interchange their genome components. Conclusions Rapid and extensive virus spread within the SWIO islands was demonstrated for three CMG complex species. Strong evolutionary or ecological interaction between CMG species may explain both their propensity

  18. Optical Bragg, atomic Bragg and cavity QED detections of quantum phases and excitation spectra of ultracold atoms in bipartite and frustrated optical lattices

    SciTech Connect

    Ye, Jinwu; Zhang, K.Y.; Li, Yan; Chen, Yan; Zhang, W.P.

    2013-01-15

    Ultracold atoms loaded on optical lattices can provide unprecedented experimental systems for the quantum simulations and manipulations of many quantum phases and quantum phase transitions between these phases. However, so far, how to detect these quantum phases and phase transitions effectively remains an outstanding challenge. In this paper, we will develop a systematic and unified theory of using the optical Bragg scattering, atomic Bragg scattering or cavity QED to detect the ground state and the excitation spectrum of many quantum phases of interacting bosons loaded in bipartite and frustrated optical lattices. The physically measurable quantities of the three experiments are the light scattering cross sections, the atom scattered clouds and the cavity leaking photons respectively. We show that the two photon Raman transition processes in the three detection methods not only couple to the density order parameter, but also the valence bond order parameter due to the hopping of the bosons on the lattice. This valence bond order coupling is very sensitive to any superfluid order or any valence bond (VB) order in the quantum phases to be probed. These quantum phases include not only the well-known superfluid and Mott insulating phases, but also other important phases such as various kinds of charge density waves (CDW), valence bond solids (VBS), and CDW-VBS phases with both CDW and VBS orders unique to frustrated lattices, and also various kinds of supersolids. We analyze respectively the experimental conditions of the three detection methods to probe these various quantum phases and their corresponding excitation spectra. We also address the effects of a finite temperature and a harmonic trap. We contrast the three scattering methods with recent in situ measurements inside a harmonic trap and argue that the two kinds of measurements are complementary to each other. The combination of both kinds of detection methods could be used to match the combination of

  19. The General Evolving Model for Energy Supply-Demand Network with Local-World

    NASA Astrophysics Data System (ADS)

    Sun, Mei; Han, Dun; Li, Dandan; Fang, Cuicui

    2013-10-01

    In this paper, two general bipartite network evolving models for energy supply-demand network with local-world are proposed. The node weight distribution, the "shifting coefficient" and the scaling exponent of two different kinds of nodes are presented by the mean-field theory. The numerical results of the node weight distribution and the edge weight distribution are also investigated. The production's shifted power law (SPL) distribution of coal enterprises and the installed capacity's distribution of power plants in the US are obtained from the empirical analysis. Numerical simulations and empirical results are given to verify the theoretical results.

  20. Nonclassicality of local bipartite correlations

    NASA Astrophysics Data System (ADS)

    Jebaratnam, C.; Aravinda, S.; Srikanth, R.

    2017-03-01

    Simulating quantum nonlocality and steering requires augmenting preshared randomness with nonvanishing communication cost. This prompts the question of how one may provide such an operational characterization for the quantumness of correlations due to even unentangled states. Here we show that for a certain class of states, such quantumness can be pointed out by superlocality, the requirement for a larger dimension of the preshared randomness to simulate the correlations than that of the quantum state that generates them. This provides an approach to define the nonclassicality of local multipartite correlations in convex operational theories.

  1. Localisation and protein-protein interactions of the Helicobacter pylori taxis sensor TlpD and their connection to metabolic functions

    PubMed Central

    Behrens, Wiebke; Schweinitzer, Tobias; McMurry, Jonathan L.; Loewen, Peter C.; Buettner, Falk F.R.; Menz, Sarah; Josenhans, Christine

    2016-01-01

    The Helicobacter pylori energy sensor TlpD determines tactic behaviour under low energy conditions and is important in vivo. We explored protein-protein interactions of TlpD and their impact on TlpD localisation and function. Pull-down of tagged TlpD identified protein interaction partners of TlpD, which included the chemotaxis histidine kinase CheAY2, the central metabolic enzyme aconitase (AcnB) and the detoxifying enzyme catalase (KatA). We confirmed that KatA and AcnB physically interact with TlpD. While the TlpD-dependent behavioural response appeared not influenced in the interactor mutants katA and acnB in steady-state behavioural assays, acetone carboxylase subunit (acxC) mutant behaviour was altered. TlpD was localised in a bipolar subcellular pattern in media of high energy. We observed a significant change in TlpD localisation towards the cell body in cheAY2-, catalase- or aconitase-deficient bacteria or in bacteria incubated under low energy conditions, including oxidative stress or respiratory inhibition. Inactivation of tlpD resulted in an increased sensitivity to iron limitation and oxidative stress and influenced the H. pylori transcriptome. Oxidative stress, iron limitation and overexpressing the iron-sulfur repair system nifSU altered TlpD-dependent behaviour. We propose that TlpD localisation is instructed by metabolic activity and protein interactions, and its sensory activity is linked to iron-sulfur cluster integrity. PMID:27045738

  2. Localisation and protein-protein interactions of the Helicobacter pylori taxis sensor TlpD and their connection to metabolic functions.

    PubMed

    Behrens, Wiebke; Schweinitzer, Tobias; McMurry, Jonathan L; Loewen, Peter C; Buettner, Falk F R; Menz, Sarah; Josenhans, Christine

    2016-04-05

    The Helicobacter pylori energy sensor TlpD determines tactic behaviour under low energy conditions and is important in vivo. We explored protein-protein interactions of TlpD and their impact on TlpD localisation and function. Pull-down of tagged TlpD identified protein interaction partners of TlpD, which included the chemotaxis histidine kinase CheAY2, the central metabolic enzyme aconitase (AcnB) and the detoxifying enzyme catalase (KatA). We confirmed that KatA and AcnB physically interact with TlpD. While the TlpD-dependent behavioural response appeared not influenced in the interactor mutants katA and acnB in steady-state behavioural assays, acetone carboxylase subunit (acxC) mutant behaviour was altered. TlpD was localised in a bipolar subcellular pattern in media of high energy. We observed a significant change in TlpD localisation towards the cell body in cheAY2-, catalase- or aconitase-deficient bacteria or in bacteria incubated under low energy conditions, including oxidative stress or respiratory inhibition. Inactivation of tlpD resulted in an increased sensitivity to iron limitation and oxidative stress and influenced the H. pylori transcriptome. Oxidative stress, iron limitation and overexpressing the iron-sulfur repair system nifSU altered TlpD-dependent behaviour. We propose that TlpD localisation is instructed by metabolic activity and protein interactions, and its sensory activity is linked to iron-sulfur cluster integrity.

  3. The testis-specific VAD1.3/AEP1 interacts with {beta}-actin and syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite nucleus localization (BNL) sequence

    SciTech Connect

    Zuo, Yan; Gao, Jing; Yeung, William S.B.; Lee, Kai-Fai

    2010-10-15

    Research highlights: {yields} VAD1.3 interacts {beta}-actin and syntaxin 1. {yields} VAD1.3 colocalizes {beta}-actin in spermatids. {yields} The bipartite nucleus localization (BNL) signal is important for peri-nuclear/Golgi expression in transfected cells. {yields} The C-terminal region of VAD1.3 direct nuclei localization. -- Abstract: VAD1.3 (AEP1), a novel testis-specific gene, was first isolated from the testis of a retinol-treated vitamin-A-deficient (VAD) rat model. It is expressed at the acrosomal region of spermatids from postnatal day 25. VAD1.3 immunoreactivity is present in rat, human, monkey and porcine spermatids and spermatozoa, suggesting that VAD1.3 may play a role in acrosome formation. However, direct evidence on the detailed sub-cellular localization of the VAD1.3 protein in the acrosome and how VAD1.3 is involved in acrosome formation remains largely unknown. Here, we isolated and identified VAD1.3 interacting proteins by immunoprecipitation followed by mass spectrometry, and determined the functional motifs of VAD1.3 that were important for its specific sub-cellular location in vitro. We found that VAD1.3 bound to syntaxin 1 and {beta}-actin proteins in vitro. Immunogold electron microscopic study localized VAD1.3 immunoreactivity to the acrosome membranes and matrix, and colocalized it with the {beta}-actin protein. The full-length GFP-VAD (1-3601) and GFP-VAD (1-730) fusion proteins that contain the bipartite nucleus localization (BNL) signal were located in the peri-nucleus/Golgi of the transfected cells. In addition, the GFP signal colocalized with the endoplasmic reticulum marker and the syntaxin 1 protein in the transfected HeLa and GC-2spd cells. The C-terminal GFP-VAD (1770-3601) was expressed in the nucleus. Taken together, VAD1.3 interacts with {beta}-actin and syntaxin 1 in vitro. The BNL signal may mediate the peri-nuclei localization of the protein that may interact with syntaxin 1 and {beta}-actin for acrosome formation in

  4. A comparison of Agrobacterium-mediated transformation and protoplast-mediated transformation with CRISPR-Cas9 and bipartite gene targeting substrates, as effective gene targeting tools for Aspergillus carbonarius.

    PubMed

    Weyda, István; Yang, Lei; Vang, Jesper; Ahring, Birgitte K; Lübeck, Mette; Lübeck, Peter S

    2017-04-01

    In recent years, versatile genetic tools have been developed and applied to a number of filamentous fungi of industrial importance. However, the existing techniques have limitations when it comes to achieve the desired genetic modifications, especially for efficient gene targeting. In this study, we used Aspergillus carbonarius as a host strain due to its potential as a cell factory, and compared three gene targeting techniques by disrupting the ayg1 gene involved in the biosynthesis of conidial pigment in A. carbonarius. The absence of the ayg1 gene leads to phenotypic change in conidia color, which facilitated the analysis on the gene targeting frequency. The examined transformation techniques included Agrobacterium-mediated transformation (AMT) and protoplast-mediated transformation (PMT). Furthermore, the PMT for the disruption of the ayg1 gene was carried out with bipartite gene targeting fragments and the recently adapted CRISPR-Cas9 system. All three techniques were successful in generating Δayg1 mutants, but showed different efficiencies. The most efficient method for gene targeting was AMT, but further it was shown to be dependent on the choice of Agrobacterium strain. However, there are different advantages and disadvantages of all three gene targeting methods which are discussed, in order to facilitate future approaches for fungal strain improvements.

  5. How to Restore Plant's Taxis in Microgravity

    NASA Astrophysics Data System (ADS)

    Gorgolewski, S.

    All plants respond to gravity, yet in micro-gravity not all plants will grow the way as they do on the Earth. Successful space experiments with plants grown from seed to seed, were performed (to the best of my knowledge) with non electrotropic plants. Such plants use phototropism instead of the gravitropism. The electrotropic plants have been successfully grown in phytotron and in a greenhouse. We used the electric field to direct their growth where we want them to grow. Normally the ground or soil is negatively charged, and plants grow upwards towards positive charges in the air or the anode (positive electrode) in plant growth chambers. In reversed field polarization with "ground positive" the lettuce grows down-wards. In horizontal electric fields it grows horizontally again towards positively charged field generating conducting plate. This is at the first glance a very surprising effect even to the physicist. But one has to remember the most important fact that the electromagnetic forces are a factor of 1038 times stronger than the gravitational force. On the Earth the gravity acts on the entire plant, but the electrical field acts only on ions which are distributed on the surface of leaves, sprouts or stem tips. The ions are directed so very much strongly (1038 times) by the electrical field, than by gravity. The electric field lines guide the concentrations of ions to follow the field lines rendering the plants electrotropic and shaping their growth pattern. There is also a clear positive dependence of the rate of plant growth on field strength and crop yield. This is why it is so important to know which plants are electrotropic not only for use in space but also in greenhouse plant cultures. It is very much cheaper to select the electrotropic plant here, and not in space experiments for best cost efficiency. Special light weight plant growth chambers have been designed and very successfully used in terrestrial experiments. We can make the plant growth chambers very much lighter for space applications. We do not need to send them assembled into space, but rather make them foldable. Then we do not strain the plant growth chambers by vibrations and about 10 times stronger accelerations than gravity during launch, besides they are also not gravitationally loaded in space. We deploy them by stretching or inflating, them and suspend them using springs to get them into the needed shape and position. Some considerations have been given to some designs of space borne plant growth chambers. We pay special attention to secure the very important advantages of light weight and low cost so vital in space applications.

  6. F-18 SRA taxi at dawn

    NASA Technical Reports Server (NTRS)

    1993-01-01

    One of NASA's F/A-18 Hornets is seen here sitting on the ramp at the Dryden Flight Research Center, Edwards, California, at dawn August 6, 1993. F-18 aircraft, on loan to NASA by the U.S. Navy, are currently being flown at Dryden as support aircraft and as research testbeds. As support aircraft, they are used primarily for safety chase, pilot proficiency and aerial photography. As research aircraft, they are involved in thrust vectoring and high angle of attack research, as well as numerous smaller scale experiments.

  7. Energy 101: Geothermal Energy

    SciTech Connect

    2014-05-27

    See how we can generate clean, renewable energy from hot water sources deep beneath the Earth's surface. The video highlights the basic principles at work in geothermal energy production, and illustrates three different ways the Earth's heat can be converted into electricity.

  8. Energy 101: Geothermal Energy

    ScienceCinema

    None

    2016-07-12

    See how we can generate clean, renewable energy from hot water sources deep beneath the Earth's surface. The video highlights the basic principles at work in geothermal energy production, and illustrates three different ways the Earth's heat can be converted into electricity.

  9. Energy: Conservation, Energy Briefs

    ERIC Educational Resources Information Center

    Nation's Schools and Colleges, 1975

    1975-01-01

    A comprehensive energy conservation program at College of the Holy Cross has saved nearly one-third of the fuel oil and one-fifth of the electricity used at the college; briefs on boilers, lights, design. (Author/MLF)

  10. Modeling silicon diode energy response factors for use in therapeutic photon beams.

    PubMed

    Eklund, Karin; Ahnesjö, Anders

    2009-10-21

    Silicon diodes have good spatial resolution, which makes them advantageous over ionization chambers for dosimetry in fields with high dose gradients. However, silicon diodes overrespond to low-energy photons, that are more abundant in scatter which increase with large fields and larger depths. We present a cavity-theory-based model for a general response function for silicon detectors at arbitrary positions within photon fields. The model uses photon and electron spectra calculated from fluence pencil kernels. The incident photons are treated according to their energy through a bipartition of the primary beam photon spectrum into low- and high-energy components. Primary electrons from the high-energy component are treated according to Spencer-Attix cavity theory. Low-energy primary photons together with all scattered photons are treated according to large cavity theory supplemented with an energy-dependent factor K(E) to compensate for energy variations in the electron equilibrium. The depth variation of the response for an unshielded silicon detector has been calculated for 5 x 5 cm(2), 10 x 10 cm(2) and 20 x 20 cm(2) fields in 6 and 15 MV beams and compared with measurements showing that our model calculates response factors with deviations less than 0.6%. An alternative method is also proposed, where we show that one can use a correlation with the scatter factor to determine the detector response of silicon diodes with an error of less than 3% in 6 MV and 15 MV photon beams.

  11. Rotational Energy.

    ERIC Educational Resources Information Center

    Lockett, Keith

    1988-01-01

    Demonstrates several objects rolling down a slope to explain the energy transition among potential energy, translational kinetic energy, and rotational kinetic energy. Contains a problem from Galileo's rolling ball experiment. (YP)

  12. Energy Technology.

    ERIC Educational Resources Information Center

    Eaton, William W.

    Reviewed are technological problems faced in energy production including locating, recovering, developing, storing, and distributing energy in clean, convenient, economical, and environmentally satisfactory manners. The energy resources of coal, oil, natural gas, hydroelectric power, nuclear energy, solar energy, geothermal energy, winds, tides,…

  13. Bipartite Task of Immunity in Cancer Progression.

    PubMed

    Sarode, Gargi S; Sarode, Sachin C; Batra, Akshit; Patil, Shankargouda

    2016-10-01

    The spontaneous regression and remission from malignancy was defined by Everson and Cole(1) as "the partial or complete disappearance of a malignant tumor in the absence of all treatment, or in the presence of therapy which is considered inadequate to exert significant influence on neoplastic disease."

  14. Quantum control on entangled bipartite qubits

    SciTech Connect

    Delgado, Francisco

    2010-04-15

    Ising interactions between qubits can produce distortion on entangled pairs generated for engineering purposes (e.g., for quantum computation or quantum cryptography). The presence of parasite magnetic fields destroys or alters the expected behavior for which it was intended. In addition, these pairs are generated with some dispersion in their original configuration, so their discrimination is necessary for applications. Nevertheless, discrimination should be made after Ising distortion. Quantum control helps in both problems; making some projective measurements upon the pair to decide the original state to replace it, or just trying to reconstruct it using some procedures which do not alter their quantum nature. Results about the performance of these procedures are reported. First, we will work with pure systems studying restrictions and advantages. Then, we will extend these operations for mixed states generated with uncertainty in the time of distortion, correcting them by assuming the control prescriptions for the most probable one.

  15. Renewable energy.

    PubMed

    Destouni, Georgia; Frank, Harry

    2010-01-01

    The Energy Committee of the Royal Swedish Academy of Sciences has in a series of projects gathered information and knowledge on renewable energy from various sources, both within and outside the academic world. In this article, we synthesize and summarize some of the main points on renewable energy from the various Energy Committee projects and the Committee's Energy 2050 symposium, regarding energy from water and wind, bioenergy, and solar energy. We further summarize the Energy Committee's scenario estimates of future renewable energy contributions to the global energy system, and other presentations given at the Energy 2050 symposium. In general, international coordination and investment in energy research and development is crucial to enable future reliance on renewable energy sources with minimal fossil fuel use.

  16. Solar Energy.

    ERIC Educational Resources Information Center

    Eaton, William W.

    Presented is the utilization of solar radiation as an energy resource principally for the production of electricity. Included are discussions of solar thermal conversion, photovoltic conversion, wind energy, and energy from ocean temperature differences. Future solar energy plans, the role of solar energy in plant and fossil fuel production, and…

  17. Understanding Energy

    ERIC Educational Resources Information Center

    Menon, Deepika; Shelby, Blake; Mattingly, Christine

    2016-01-01

    "Energy" is a term often used in everyday language. Even young children associate energy with the food they eat, feeling tired after playing soccer, or when asked to turn the lights off to save light energy. However, they may not have the scientific conceptual understanding of energy at this age. Teaching energy and matter could be…

  18. Energy Auditing.

    ERIC Educational Resources Information Center

    Association of Energy Engineers, Atlanta, GA.

    Presented is a discussion of various aspects of policy and implementation of energy auditing at various levels of government. Included are 11 chapters dealing with: (1) a national energy plan, (2) state certification for energy auditors, (3) survey instrumentation, (4) energy management economics, (5) Maine school energy auditing, (6) energy…

  19. Energy overview

    NASA Technical Reports Server (NTRS)

    Slone, H. O.

    1980-01-01

    The experience, capabilities, and facilities being utilized at NASA Lewis in support of energy programs conducted by the Department of Energy and other agencies are discussed. Background information is given regarding NASA's involvement in solving energy problems.

  20. Energy Models

    EPA Science Inventory

    Energy models characterize the energy system, its evolution, and its interactions with the broader economy. The energy system consists of primary resources, including both fossil fuels and renewables; power plants, refineries, and other technologies to process and convert these r...

  1. Energy Challenges

    NASA Astrophysics Data System (ADS)

    Johnson, C. Bruce

    2007-10-01

    Without energy (E) there is nothing, m=E/c^2. Without energy the various global economies will collapse. In fact, these economies generally require more energy every year. Where will this energy come from? What are the expected impacts of the various energy sources & uses on the environment? Brief summary answers to these questions are presented, and a plea is made for more energy R&D at our national laboratories and within the industrial community.

  2. Energy Theater

    NASA Astrophysics Data System (ADS)

    Daane, Abigail R.; Wells, Lindsay; Scherr, Rachel E.

    2014-05-01

    Energy Theater is a dynamic, full-body activity that engages all students in representing the flow of energy in various phenomena, such as a light bulb burning steadily or a refrigerator cooling food. In Energy Theater, each participant acts as a unit of energy that has one form at a time. Regions on the floor correspond to objects in a physical scenario, and participants move from one region to another to demonstrate the flow of energy among objects. (See Figs. 1, 3, and 4.) The goal of Energy Theater is for students to track energy transfers and transformations in real-world energy scenarios while employing the principle of energy conservation and disambiguating matter and energy. Unlike most representations of energy, which are static before-and-after accounting schemes for energy changes, Energy Theater is a dynamic representation that provides a natural stepping stone toward the more advanced ideas of energy density, energy current, and a continuity equation relating them. The fact that conservation of energy is embedded in the representation encourages students to "find the energy" in situations where it may be imperceptible. The rules of Energy Theater are listed in Fig. 2.

  3. Décision d'amputation dans la prise en charge initiale d'une luxation ouverte grave de la cheville à propos d'un cas observé à l'Hôpital Laquintinie de Douala suite à un accident par moto-taxi

    PubMed Central

    Tsatedem, Faustin Atemkeng; Tsiagadigui, Jean Gustave; Ndando, Richard Polle; Arabo, Mohamadou Saidou; Bayiha, Alphonse; Kenfack, Bruno

    2012-01-01

    La décision d'amputation pour traumatisme grave de membre n'est pas toujours facile à prendre. Les auteurs rapportent le cas d'un traumatisme ouvert de la cheville gauche avec luxation tibiotalienne complète, référé pour amputation. Il s'agit d'une passagère d'une moto-taxi percutée par une voiture. A l'admission, le pouls tibial postérieur était présent et le score dit MESS (Mangled Extremity Severity Score) côté à 5, ce qui a permis et d'éviter l'amputation. Après débridement et réduction, une broche transplantaire a permis d'immobiliser la cheville et de faire les pansements. L'amputation a été évitée. La cicatrisation dirigée de la peau a été suivie par la kinésithérapie. La mobilité de la cheville autorise une marche avec cannes au quatrième mois post-opératoire. Les auteurs recommandent l'utilisation du MESS dans la décision d'amputation après traumatisme grave de membre. PMID:23396997

  4. Energy Theater

    ERIC Educational Resources Information Center

    Daane, Abigail R.; Wells, Lindsay; Scherr, Rachel E.

    2014-01-01

    Energy Theater is a dynamic, full-body activity that engages all students in representing the flow of energy in various phenomena, such as a light bulb burning steadily or a refrigerator cooling food. In Energy Theater, each participant acts as a unit of energy that has one form at a time. Regions on the floor correspond to objects in a physical…

  5. Energy Management.

    ERIC Educational Resources Information Center

    Bete, Tim, Ed.

    1998-01-01

    Presents the opinions of three energy experts on the issue of school facility energy management. The experts respond to the following questions: will energy deregulation occur in all 50 states and will it provide real savings; and will the majority of districts hire ESCOs to manage their energy needs? (GR)

  6. Geothermal Energy.

    ERIC Educational Resources Information Center

    Conservation and Renewable Energy Inquiry and Referral Service (DOE), Silver Spring, MD.

    An introduction to geothermal energy is provided in this discussion of: (1) how a geothermal reservoir works; (2) how to find geothermal energy; (3) where it is located; (4) electric power generation using geothermal energy; (5) use of geothermal energy as a direct source of heat; (6) geopressured reservoirs; (7) environmental effects; (8)…

  7. Geothermal Energy.

    ERIC Educational Resources Information Center

    Nemzer, Marilyn; Page, Deborah

    This curriculum unit describes geothermal energy in the context of the world's energy needs. It addresses renewable and nonrenewable energy sources with an in-depth study of geothermal energy--its geology, its history, and its many uses. Included are integrated activities involving science, as well as math, social studies, and language arts.…

  8. Energy Consumption vs. Energy Requirement

    ERIC Educational Resources Information Center

    Fan, L. T.; Zhang, Tengyan; Schlup, John R.

    2006-01-01

    Energy is necessary for any phenomenon to occur or any process to proceed. Nevertheless, energy is never consumed; instead, it is conserved. What is consumed is available energy, or exergy, accompanied by an increase in entropy. Obviously, the terminology, "energy consumption" is indeed a misnomer although it is ubiquitous in the…

  9. Agricultural Energy Practices. Agriculture Energy.

    ERIC Educational Resources Information Center

    Crank, Ron

    This instructional unit is one of 10 developed by students on various energy-related areas that deals specifically with agricultural energy practices. Its objective is for the student to be able to discuss energy use and conservation of resources in the production of agricultural products. Some topics covered are basic uses of direct energy in…

  10. Energy Analysis.

    ERIC Educational Resources Information Center

    Bazjanac, Vladimir

    1981-01-01

    The Aquatic Center at Corvallis (Oregon) is analyzed for energy use. Energy conservation in the building would be accomplished best through heavy insulation of exterior surfaces and the maximization of passive solar gain. (Author/MLF)

  11. Geothermal Energy.

    ERIC Educational Resources Information Center

    Reed, Marshall J.

    1979-01-01

    During 1978, exploration for geothermal energy continued at the same moderately low level of the past few years in most countries. The U.S. is the only country where the development of geothermal energy depends on private industry. (BB)

  12. Save Energy $.

    ERIC Educational Resources Information Center

    Hirsch, Thomas E., III; Shapiro, Robert F.

    1986-01-01

    Large institutional energy users can reduce energy costs by constructing and operating steam and electricity cogeneration facilities and purchasing their own gas at lower prices rather than relying on local distributors. (MSE)

  13. Geothermal Energy

    SciTech Connect

    Steele, B.C.; Harman, G.; Pitsenbarger, J.

    1996-02-01

    Geothermal Energy Technology (GET) announces on a bimonthly basis the current worldwide information available on the technologies required for economic recovery of geothermal energy and its use as direct heat or for electric power production.

  14. Biohydrogen production from microalgal biomass: energy requirement, CO2 emissions and scale-up scenarios.

    PubMed

    Ferreira, Ana F; Ortigueira, Joana; Alves, Luís; Gouveia, Luísa; Moura, Patrícia; Silva, Carla

    2013-09-01

    This paper presents a life cycle inventory of biohydrogen production by Clostridium butyricum through the fermentation of the whole Scenedesmus obliquus biomass. The main purpose of this work was to determine the energy consumption and CO2 emissions during the production of hydrogen. This was accomplished through the fermentation of the microalgal biomass cultivated in an outdoor raceway pond and the preparation of the inoculum and culture media. The scale-up scenarios are discussed aiming for a potential application to a fuel cell hybrid taxi fleet. The H2 yield obtained was 7.3 g H2/kg of S. obliquus dried biomass. The results show that the production of biohydrogen required 71-100 MJ/MJ(H2) and emitted about 5-6 kg CO2/MJ(H2). Other studies and production technologies were taken into account to discuss an eventual process scale-up. Increased production rates of microalgal biomass and biohydrogen are necessary for bioH2 to become competitive with conventional production pathways.

  15. Energy Storage.

    ERIC Educational Resources Information Center

    Eaton, William W.

    Described are technological considerations affecting storage of energy, particularly electrical energy. The background and present status of energy storage by batteries, water storage, compressed air storage, flywheels, magnetic storage, hydrogen storage, and thermal storage are discussed followed by a review of development trends. Included are…

  16. Energy Digest.

    ERIC Educational Resources Information Center

    Gaddy, Carol T., Ed.; Wells, Kathy, Ed.

    This collection of reprints offers practical solutions, not readily available elsewhere, to everyday energy problems, such as high utility bills, insulating windows, getting more gas mileage, or buying a more efficient washer or refrigerator. The Arkansas Energy Office provides a weekly column of energy news and conservation tips to newspapers,…

  17. Energy Builders.

    ERIC Educational Resources Information Center

    Instructor, 1982

    1982-01-01

    Due to increasing energy demands and decreasing supplies, it is important for teachers to provide students with a solid foundation for energy decision making. Activities are presented which offer hands-on experiences with four sources of energy: wind, water, sun, and fossil fuels. (JN)

  18. Geothermal Energy.

    ERIC Educational Resources Information Center

    Eaton, William W.

    Described are the origin and nature of geothermal energy. Included is the history of its development as an energy source, technological considerations affecting its development as an energy source, its environmental effects, economic considerations, and future prospects of development in this field. Basic system diagrams of the operation of a…

  19. Geothermal Energy

    SciTech Connect

    Steele, B.C.; Pichiarella, L.S.; Kane, L.S.; Henline, D.M.

    1995-01-01

    Geothermal Energy (GET) announces on a bimonthly basis the current worldwide information available on the technologies required for economic recovery of geothermal energy and its use as direct heat or for electric power production. This publication contains the abstracts of DOE reports, journal articles, conference papers, patents, theses, and monographs added to the Energy Science and Technology Database during the past two months.

  20. Biomass energy

    SciTech Connect

    Smil, V.

    1983-01-01

    This book offers a broad, interdisciplinary approach to assessing the factors that are key determinants to the use of biomass energies, stressing their limitations, complexities, uncertainties, links, and consequences. Considers photosynthesis, energy costs of nutrients, problems with monoculture, and the energy analysis of intensive tree plantations. Subjects are examined in terms of environmental and economic impact. Emphasizes the use and abuse of biomass energies in China, India, and Brazil. Topics include forests, trees for energy, crop residues, fuel crops, aquatic plants, and animal and human wastes. Recommended for environmental engineers and planners, and those involved in ecology, systematics, and forestry.

  1. Marine energy.

    PubMed

    Kerr, David

    2007-04-15

    Marine energy is renewable and carbon free and has the potential to make a significant contribution to energy supplies in the future. In the UK, tidal power barrages and wave energy could make the largest contribution, and tidal stream energy could make a smaller but still a useful contribution. This paper provides an overview of the current status and prospects for electrical generation from marine energy. It concludes that a realistic potential contribution to UK electricity supplies is approximately 80 TWh per year but that many years of development and investment will be required if this potential is to be realized.

  2. Enhancement of high-speed flywheel energy storage via carbon-fiber composite reinforcement

    NASA Astrophysics Data System (ADS)

    Conteh, Michael Abu

    This study on the enhancement of high-speed flywheel energy storage is to investigate composite materials that are suitable for high-speed, high-energy density for energy storage and/or energy recovery. The main motivation of the study is to explore the application of the flywheel in the aviation industry for recovering some of the energy that is currently being lost at the wheel brakes of an aircraft due to the high temperature developed in the brake stack as a result of landing, frequent brake applications during taxiing in or out of heavy traffic airports and rejected take-off. Lamina and laminate mechanical properties of materials suitable for flywheel high-speed energy storage were investigated. Design and optimum stress analysis were used to determine the shape factor, maximum stress and energy density for a flywheel with a constant stress disk and a constant thickness rim. Analytical studies along with the use of the CADEC-online software were used to evaluate the lamina and laminate properties. This study found that the use of hybrid composite material with higher strength (based on first ply failure strength) and lower density and lower elastic moduli for the disk than the rim material will yield high-speed and high-energy density. The materials designed based on the results from this study show outperformance compared to previous published results of standard flywheel material combinations. The safe rotational velocity and energy density were found to be 166,000 RPM and 2.73 MJ/kg respectively. Therefore, results from this study will contribute to aiding further development of the flywheel that has recently re-emerged as a promising application for energy storage due to significant improvements in composite materials and technology. Further study on flywheel energy recovery from aircraft brakes revealed that more than half of the energy dissipated at the wheel brake as heat could be recovered and converted to some useful form. In this way, the operating

  3. Energy 101: Home Energy Assessment

    SciTech Connect

    2010-01-01

    A home energy checkup helps owners determine where their house is losing energy and money - and how such problems can be corrected to make the home more energy efficient. A professional technician - often called an energy auditor - can give your home a checkup. You can also do some of the steps yourself. Items shown here include checking for leaks, examining insulation, inspecting the furnace and ductwork, performing a blower door test and using an infrared camera.

  4. Energy 101: Home Energy Assessment

    ScienceCinema

    None

    2016-07-12

    A home energy checkup helps owners determine where their house is losing energy and money - and how such problems can be corrected to make the home more energy efficient. A professional technician - often called an energy auditor - can give your home a checkup. You can also do some of the steps yourself. Items shown here include checking for leaks, examining insulation, inspecting the furnace and ductwork, performing a blower door test and using an infrared camera.

  5. The role of symmetry in the theory of inelastic high-energy electron scattering and its application to atomic-resolution core-loss imaging.

    PubMed

    Dwyer, C

    2015-04-01

    The inelastic scattering of a high-energy electron in a solid constitutes a bipartite quantum system with an intrinsically large number of excitations, posing a considerable challenge for theorists. It is demonstrated how and why the utilization of symmetries, or approximate symmetries, can lead to significant improvements in both the description of the scattering physics and the efficiency of numerical computations. These ideas are explored thoroughly for the case of core-loss excitations, where it is shown that the coupled angular momentum basis leads to dramatic improvements over the bases employed in previous work. The resulting gains in efficiency are demonstrated explicitly for K-, L- and M-shell excitations, including such excitations in the context of atomic-resolution imaging in the scanning transmission electron microscope. The utilization of other symmetries is also discussed.

  6. Energy Economics. Energy Technology Series.

    ERIC Educational Resources Information Center

    Technical Education Research Centre-Southwest, Waco, TX.

    This course in energy economics is one of 16 courses in the Energy Technology Series developed for an Energy Conservation-and-Use Technology curriculum. Intended for use in two-year postsecondary technical institutions to prepare technicians for employment, the courses are also useful in industry for updating employees in company-sponsored…

  7. Energy Audits. Energy Technology Series.

    ERIC Educational Resources Information Center

    Center for Occupational Research and Development, Inc., Waco, TX.

    This course in energy audits is one of 16 courses in the Energy Technology Series developed for an Energy Conservation-and-Use Technology curriculum. Intended for use in two-year postsecondary technical institutions to prepare technicians for employment, the courses are also useful in industry for updating employees in company-sponsored training…

  8. Energy Drinks

    PubMed Central

    Ugochukwu, Chio; Bagot, Kara; Khalili, David; Zaky, Christine

    2012-01-01

    Objective: The market and degree of consumption of energy drinks have exponentially expanded while studies that assess their psychological effects and impact on quality of life remain in the early stages, albeit on the rise. This review aims to examine the literature for evidence of the psychological effects of energy drinks and their impact on the sense of well-being and quality of life. Methods: Studies were identified through Pubmed, Medline, and PsycINFO searches from the dates of 1990 to 2011, published in English, using the keywords energy or tonic drinks, psychological effects, caffeine and cognitive functions, mood, sleep, quality of life, well-being, and mental illness. Three authors agreed independently on including 41 studies that met specific selection criteria. Results: The literature reveals that people most commonly consume energy drinks to promote wakefulness, to increase energy, and to enhance the experience of alcohol intoxication. A number of studies reveal that individuals who consume energy drinks with alcohol were more inclined to be involved in risk-taking behaviors. There was also excessive daytime sleepiness the day following energy drink consumption. Contrary to expectations, the impact of energy drinks on quality of life and well-being was equivocal. Conclusions: Energy drinks have mixed psychological and well-being effects. There is a need to investigate the different contexts in which energy drinks are consumed and the impact on mental health, especially in the psychiatrically ill. PMID:22347688

  9. Transporation Energy

    SciTech Connect

    Clifford Mirman; Promod Vohra

    2012-06-30

    This Transportation Energy Project is comprised of four unique tasks which work within the railroad industry to provide solutions in various areas of energy conservation. These tasks addressed: energy reducing yard related decision issues; alternate fuels; energy education, and energy storage for railroad applications. The NIU Engineering and Technology research team examined these areas and provided current solutions which can be used to both provide important reduction in energy usage and system efficiency in the given industry. This project also sought a mode in which rural and long-distance education could be provided. The information developed in each of the project tasks can be applied to all of the rail companies to assist in developing efficiencies.

  10. Energy storage

    NASA Astrophysics Data System (ADS)

    Kaier, U.

    1981-04-01

    Developments in the area of energy storage are characterized, with respect to theory and laboratory, by an emergence of novel concepts and technologies for storing electric energy and heat. However, there are no new commercial devices on the market. New storage batteries as basis for a wider introduction of electric cars, and latent heat storage devices, as an aid for solar technology applications, with satisfactory performance standards are not yet commercially available. Devices for the intermediate storage of electric energy for solar electric-energy systems, and for satisfying peak-load current demands in the case of public utility companies are considered. In spite of many promising novel developments, there is yet no practical alternative to the lead-acid storage battery. Attention is given to central heat storage for systems transporting heat energy, small-scale heat storage installations, and large-scale technical energy-storage systems.

  11. Wind energy.

    PubMed

    Leithead, W E

    2007-04-15

    From its rebirth in the early 1980s, the rate of development of wind energy has been dramatic. Today, other than hydropower, it is the most important of the renewable sources of power. The UK Government and the EU Commission have adopted targets for renewable energy generation of 10 and 12% of consumption, respectively. Much of this, by necessity, must be met by wind energy. The US Department of Energy has set a goal of 6% of electricity supply from wind energy by 2020. For this potential to be fully realized, several aspects, related to public acceptance, and technical issues, related to the expected increase in penetration on the electricity network and the current drive towards larger wind turbines, need to be resolved. Nevertheless, these challenges will be met and wind energy will, very likely, become increasingly important over the next two decades. An overview of the technology is presented.

  12. Energy Industry

    DTIC Science & Technology

    2007-01-01

    Biomass energy includes the burning of products such as wood, methanol, sludge, railroad ties, and agricultural waste, to produce heat, steam and... energy . Recent political will elevated the development of biomass fuels to the top of the President’s political agenda. In his 2007 State of the...Union Address, President Bush set an ambitious goal for the nation to draw 20% of its energy needs from the use of ethanol, a biomass derived fuel

  13. Nuclear energy.

    PubMed

    Grandin, Karl; Jagers, Peter; Kullander, Sven

    2010-01-01

    Nuclear energy can play a role in carbon free production of electrical energy, thus making it interesting for tomorrow's energy mix. However, several issues have to be addressed. In fission technology, the design of so-called fourth generation reactors show great promise, in particular in addressing materials efficiency and safety issues. If successfully developed, such reactors may have an important and sustainable part in future energy production. Working fusion reactors may be even more materials efficient and environmental friendly, but also need more development and research. The roadmap for development of fourth generation fission and fusion reactors, therefore, asks for attention and research in these fields must be strengthened.

  14. Solar energy

    NASA Technical Reports Server (NTRS)

    Rapp, D.

    1981-01-01

    The book opens with a review of the patterns of energy use and resources in the United States, and an exploration of the potential of solar energy to supply some of this energy in the future. This is followed by background material on solar geometry, solar intensities, flat plate collectors, and economics. Detailed attention is then given to a variety of solar units and systems, including domestic hot water systems, space heating systems, solar-assisted heat pumps, intermediate temperature collectors, space heating/cooling systems, concentrating collectors for high temperatures, storage systems, and solar total energy systems. Finally, rights to solar access are discussed.

  15. Wind Energy

    SciTech Connect

    Ganley, Jason; Zhang, Jie; Hodge, Bri-Mathias

    2016-03-15

    Wind energy is a variable and uncertain renewable resource that has long been used to produce mechanical work, and has developed into a large producer of global electricity needs. As renewable sources of energy and feedstocks become more important globally to produce sustainable products, many different processes have started adopting wind power as an energy source. Many times this is through a conversion to hydrogen through electrolysis that allows for a more continuous process input. Other important pathways include methanol and ammonia. As the demand for sustainable products and production pathways increases, and wind power capital costs decrease, the role of wind power in chemical and energy production seems poised to increase significantly.

  16. Energy Demands

    ERIC Educational Resources Information Center

    Wilkinson, Ron

    2010-01-01

    When construction slows and campus operating expenses are under the microscope, it is more important than ever to save energy dollars with the equipment and staff on hand. For the facilities manager who thinks out of the box, significant savings can be found on most school and college campuses. This article provides energy-conservation tips that…

  17. Geothermal Energy.

    ERIC Educational Resources Information Center

    Bufe, Charles Glenn

    1983-01-01

    Major activities, programs, and conferences in geothermal energy during 1982 are highlighted. These include first comprehensive national assessment of U.S. low-temperature geothermal resources (conducted by U.S. Geological Survey and Department of Energy), map production by U.S. Geological Survey, geothermal plant production, and others. (JN)

  18. Energy Underground.

    ERIC Educational Resources Information Center

    Wiley, Catherina L.

    2003-01-01

    Describes a unit to study the cycling of matter and energy through speleology using cooperative learning groups. Integrates the topic with zoology, biogeochemistry, paleontology, and meteorology. Includes a sample rubric for a salt block cave presentation, unit outline, and processes for studying matter and energy processes in caves. (Author/KHR)

  19. Energy - 1977.

    ERIC Educational Resources Information Center

    Kansas State Board of Regents, Topeka.

    A checklist of energy consumption reduction measures for universities is provided with the intent of achieving rapid and significant energy savings at minimal cost. Measures described should be within the scope of accomplishment by regular university operating and maintenance personnel. The measures involve non-technical actions such as adjusting…

  20. Energy Adventure.

    ERIC Educational Resources Information Center

    Oak Ridge Associated Universities, TN.

    Designed as an interdisciplinary, supplemental teaching guide, this document provides fundamental information about energy supply, use, and conservation and related learning activities for secondary students. Eight units address the following topics: energy history, petroleum, natural gas, coal, electricity, alternative sources, energy…

  1. Energy Solutions

    ERIC Educational Resources Information Center

    Sobieski, Jeff

    2010-01-01

    Education facilities managers are faced with a daunting set of challenges: They must find new ways to reduce energy consumption and carry out greener energy policies. HVAC typically accounts for more than 30% of a building's electricity costs, so there is a clear incentive to eliminate unnecessary heating and cooling of unoccupied rooms. With more…

  2. Energy Control Systems: Energy Savings.

    ERIC Educational Resources Information Center

    School Business Affairs, 1980

    1980-01-01

    The installation of proper control systems is estimated as saving up to 25 percent of the energy used in schools. Other potential energy-saving areas are transmission (heat loss or gain through walls, especially ceilings); internal load (heat from students, lights, and machinery); ventilation; and equipment maintenance. (Author/MLF)

  3. Energy Saver

    NASA Technical Reports Server (NTRS)

    1985-01-01

    Harris Semiconductor Company used technology which they found in Tech Briefs as the basis for an integrated circuit to reduce onto one chip most of the circuitry of the motors, for example working machines, drill presses, etc. Harris produced an induction motor energy saver (IMES) centered upon a silicon chip. The chip computes the precise voltage and the IMES monitors the motor and provides the energy. An IMES equipped drill press uses only 79 watts of energy as compared to the usual 160 watts.

  4. Energy generator

    SciTech Connect

    Krisko, P.

    1989-08-01

    The patent describes a power booster. It comprises: at least one pendulum means suspended at one end to oscillate about the point of suspension; power generating means; mass means connected to one end of the pendulum means; spring means disposed in operative cooperation with the mass means to impart energy into the pendulum means and assist the pendulum means in oscillating about the point of suspension; and energy transfer linkage means between the pendulum means and the power generating means for transferring energy between the pendulum means and the power generating means.

  5. Salinity Energy.

    ERIC Educational Resources Information Center

    Schmitt, Walter R.

    1987-01-01

    Discussed are the costs of deriving energy from the earth's natural reserves of salt. Argues that, as fossil fuel supplies become more depleted in the future, the environmental advantages of salinity power may prove to warrant its exploitation. (TW)

  6. Energy Bingo.

    ERIC Educational Resources Information Center

    Canipe, Stephen

    Rules are provided for this bingo game focusing on terms related to solar, coal, nuclear, hydro, and wind energy. Playing cards and calling cards (to be cut out by the teacher) are also provided. (JN)

  7. Energy Conservation

    ERIC Educational Resources Information Center

    Abelson, Philip H.

    1972-01-01

    Comments on The Potential for Energy Conservation,'' a study by the Office of Emergency Preparedness, emphasizing the coming dependence on foreign oil, and presses for government influence to encourage development of more efficient cars. (AL)

  8. Tidal Energy.

    ERIC Educational Resources Information Center

    Impact of Science on Society, 1987

    1987-01-01

    States that tidal power projects are feasible in a relatively limited number of locations around the world. Claims that together they could theoretically produce the energy equivalent to more than one million barrels of oil per year. (TW)

  9. Energy Storage

    SciTech Connect

    Mukundan, Rangachary

    2014-09-30

    Energy storage technology is critical if the U.S. is to achieve more than 25% penetration of renewable electrical energy, given the intermittency of wind and solar. Energy density is a critical parameter in the economic viability of any energy storage system with liquid fuels being 10 to 100 times better than batteries. However, the economical conversion of electricity to fuel still presents significant technical challenges. This project addressed these challenges by focusing on a specific approach: efficient processes to convert electricity, water and nitrogen to ammonia. Ammonia has many attributes that make it the ideal energy storage compound. The feed stocks are plentiful, ammonia is easily liquefied and routinely stored in large volumes in cheap containers, and it has exceptional energy density for grid scale electrical energy storage. Ammonia can be oxidized efficiently in fuel cells or advanced Carnot cycle engines yielding water and nitrogen as end products. Because of the high energy density and low reactivity of ammonia, the capital cost for grid storage will be lower than any other storage application. This project developed the theoretical foundations of N2 catalysis on specific catalysts and provided for the first time experimental evidence for activation of Mo 2N based catalysts. Theory also revealed that the N atom adsorbed in the bridging position between two metal atoms is the critical step for catalysis. Simple electrochemical ammonia production reactors were designed and built in this project using two novel electrolyte systems. The first one demonstrated the use of ionic liquid electrolytes at room temperature and the second the use of pyrophosphate based electrolytes at intermediate temperatures (200 – 300 ºC). The mechanism of high proton conduction in the pyrophosphate materials was found to be associated with a polyphosphate second phase contrary to literature claims and ammonia production rates as high as 5X 10

  10. Energy 101: Clean Energy Manufacturing

    ScienceCinema

    None

    2016-07-12

    Most of us have a basic understanding of manufacturing. It's how we convert raw materials, components, and parts into finished goods that meet our essential needs and make our lives easier. But what about clean energy manufacturing? Clean energy and advanced manufacturing have the potential to rejuvenate the U.S. manufacturing industry and open pathways to increased American competitiveness. Watch this video to learn more about this exciting movement and to see some of these innovations in action.

  11. Energy 101: Clean Energy Manufacturing

    SciTech Connect

    2015-07-09

    Most of us have a basic understanding of manufacturing. It's how we convert raw materials, components, and parts into finished goods that meet our essential needs and make our lives easier. But what about clean energy manufacturing? Clean energy and advanced manufacturing have the potential to rejuvenate the U.S. manufacturing industry and open pathways to increased American competitiveness. Watch this video to learn more about this exciting movement and to see some of these innovations in action.

  12. Energy development

    USGS Publications Warehouse

    Lovich, Jeffrey E.; Jones, L.L.C.; Lovich, R. L.; Halama, K.J.

    2016-01-01

    Large areas of the desert southwest are currently developed or being evaluated for construction of utility-scale renewable energy projects. These projects include numerous solar and wind energy facilities some of which will be massive. Unfortunately, peer-reviewed scientific publications are not yet available to evaluate the potential effects of solar-based utility-scale renewable energy development (USRED) on any species of wildlife, including amphibians and reptiles (herpetofauna). Scientific publications on the effects of wind-based USRED and operation (USREDO) are focused almost exclusively on flying wildlife including birds and bats. To the best of our knowledge the only publications on the effects of wind-based USREDO on herpetofauna are three publications on desert tortoise ecology at a wind energy facility near Palm Springs, California. Those studies suggested that not all effects of USREDO were detrimental in the short-term. However, additional research is required to determine if wind energy operation is compatible with conservation of this long-lived species over longer periods of time.

  13. Geothermal energy

    NASA Astrophysics Data System (ADS)

    Manzella, A.

    2015-08-01

    Geothermal technologies use renewable energy resources to generate electricity and direct use of heat while producing very low levels of greenhouse-gas (GHG) emissions. Geothermal energy is stored in rocks and in fluids circulating in the underground. Electricity generation usually requires geothermal resources temperatures of over 100°C. For heating, geothermal resources spanning a wider range of temperatures can be used in applications such as space and district heating (and cooling, with proper technology), spa and swimming pool heating, greenhouse and soil heating, aquaculture pond heating, industrial process heating and snow melting. Geothermal technology, which has focused so far on extracting naturally heated steam or hot water from natural hydrothermal reservoirs, is developing to more advanced techniques to exploit the heat also where underground fluids are scarce and to use the Earth as a potential energy battery, by storing heat. The success of the research will enable energy recovery and utilization from a much larger fraction of the accessible thermal energy in the Earth's crust.

  14. Energy Conservation

    SciTech Connect

    Simpson, P.

    1995-06-01

    There are two fundamental reasons or motivations for energy conservation: (1) economics; and (2) consideration of energy - its sources and availability. Economics speaks for itself and needs little explanation: a project is undertaken, the cost is recovered in a given period of time (we hope) and our company realizes cost savings thereafter. We study and propose a project; we estimate the payback. If approved, we implement the project. Then, we eagerly watch for its effectiveness - for the proposed payback. The second consideration in regard to energy conservation might - in the foreseeable future - become by far the most important - that of availability. Very knowledgeable persons have stated that this - in reality - is the most serious problem facing our nation today. Readily available, reasonably priced energy has given to the US the high form of living experienced today. An interruption in this flow could catapult our nation in an awesome catastrophe. The energy shortage of the late 70`s might be a forerunner of such an experience.

  15. Bacterial Energy Sensor Aer Modulates the Activity of the Chemotaxis Kinase CheA Based on the Redox State of the Flavin Cofactor.

    PubMed

    Samanta, Dipanjan; Widom, Joanne; Borbat, Peter P; Freed, Jack H; Crane, Brian R

    2016-12-09

    Flagellated bacteria modulate their swimming behavior in response to environmental cues through the CheA/CheY signaling pathway. In addition to responding to external chemicals, bacteria also monitor internal conditions that reflect the availability of oxygen, light, and reducing equivalents, in a process termed "energy taxis." In Escherichia coli, the transmembrane receptor Aer is the primary energy sensor for motility. Genetic and physiological data suggest that Aer monitors the electron transport chain through the redox state of its FAD cofactor. However, direct biochemical data correlating FAD redox chemistry with CheA kinase activity have been lacking. Here, we test this hypothesis via functional reconstitution of Aer into nanodiscs. As purified, Aer contains fully oxidized FAD, which can be chemically reduced to the anionic semiquinone (ASQ). Oxidized Aer activates CheA, whereas ASQ Aer reversibly inhibits CheA. Under these conditions, Aer cannot be further reduced to the hydroquinone, in contrast to the proposed Aer signaling model. Pulse ESR spectroscopy of the ASQ corroborates a potential mechanism for signaling in that the resulting distance between the two flavin-binding PAS (Per-Arnt-Sim) domains implies that they tightly sandwich the signal-transducing HAMP domain in the kinase-off state. Aer appears to follow oligomerization patterns observed for related chemoreceptors, as higher loading of Aer dimers into nanodiscs increases kinase activity. These results provide a new methodological platform to study Aer function along with new mechanistic details into its signal transduction process.

  16. Energy Deskbook

    SciTech Connect

    Glasstone, S

    1982-06-01

    The purpose of the Energy Deskbook is to serve as a convenient reference to definitions of energy-related terms and descriptions of current and potential energy sources and their utilization. The material is presented at a low technical level with emphasis on general principles, which are not difficult to understand, rather than technology. The entries vary in length from a few lines to several pages, according to circumstances. As a general rule, each topic is defined and outlined in the first paragraph; this may be followed by a more detailed treatment, as required. An important feature of the Deskbook is the use of boldface (heavy) type for cross references. Words in the text set in boldface are the titles of articles where the particular subjects are described.

  17. Moving Energy

    SciTech Connect

    Rameau, Jon; Crabtree, George; Greene, Laura; Kwok, Wai; Johnson, Peter; Tsvelik, Alexei

    2013-07-18

    Representing the Center for Emergent Superconductivity (CES), this document is one of the entries in the Ten Hundred and One Word Challenge. As part of the challenge, the 46 Energy Frontier Research Centers were invited to represent their science in images, cartoons, photos, words and original paintings, but any descriptions or words could only use the 1000 most commonly used words in the English language, with the addition of one word important to each of the EFRCs and the mission of DOE: energy. The mission of the CES is to discover new high-temperature superconductors and improve the performance of known superconductors by understanding the fundamental physics of superconductivity.

  18. Energy Research

    ERIC Educational Resources Information Center

    Group of Eight (NJ1), 2010

    2010-01-01

    The Group of Eight (Go8) is a coalition of leading Australian universities, intensive in research and comprehensive in general and professional education. The Go8 member universities recognise that the issue of energy usage and transformation is one of vital importance not only to Australia but to the world as a whole. The universities aim to make…

  19. Creating Energy.

    ERIC Educational Resources Information Center

    Wilson, David A.

    The author of this booklet is an engineer who conducts experiments in solar energy. Here he has described basic principles of the field. He also details methods of constructing a variety of solar implements, including solar panels, solar cells, a concentrating collector and a solar furnace. The book is intended for the layman and contains…

  20. Creative Energy

    ERIC Educational Resources Information Center

    Dexter, Stephen F., Jr.

    2008-01-01

    In this article, the author shares four strategies that will keep school leaders involved in their schools, connected to their peers, and enthusiastic about it all. Here, the author describes how he has managed to balance the "impossible" with things that give him the energy to face the Mondays and start each new year. So, whether it's…

  1. Energy Recovery

    NASA Astrophysics Data System (ADS)

    1987-01-01

    The United States and other countries face the problem of waste disposal in an economical, environmentally safe manner. A widely applied solution adopted by Americans is "waste to energy," incinerating the refuse and using the steam produced by trash burning to drive an electricity producing generator. NASA's computer program PRESTO II, (Performance of Regenerative Superheated Steam Turbine Cycles), provides power engineering companies, including Blount Energy Resources Corporation of Alabama, with the ability to model such features as process steam extraction, induction and feedwater heating by external sources, peaking and high back pressure. Expansion line efficiency, exhaust loss, leakage, mechanical losses and generator losses are used to calculate the cycle heat rate. The generator output program is sufficiently precise that it can be used to verify performance quoted in turbine generator supplier's proposals.

  2. The Energy Crisis and Solar Energy

    ERIC Educational Resources Information Center

    Bockris, J. O'M.

    1974-01-01

    Examines the status of the energy crisis in Australia. Outlines energy alternatives for the 1990's and describes the present status of solar energy research and the economics of solar energy systems. (GS)

  3. Cold energy

    SciTech Connect

    Wallace, John P.

    2015-12-04

    Deviations in Q for resonant superconducting radio frequency niobium accelerator cavities are generally correlated with resistivity loss mechanisms. Field dependent Qs are not well modeled by these classical loss mechanisms, but rather can represent a form of precision cavity surface thermometry. When the field dependent Q variation shows improvement with increasing B field level the classical treatment of this problem is inadequate. To justify this behavior hydrogen as a ubiquitous impurity in niobium, which creates measurable property changes, even at very low concentrations is typically considered the cause of such anomalous behavior. This maybe the case in some instances, but more importantly any system operating with a highly coherent field with a significant time dependent magnetic component at near 2° K will have the ability to organize the remaining free spins within the London penetration depth to form a coupled energy reservoir in the form of low mass spin waves. The niobium resonant cavities are composed of a single isotope with a large nuclear spin. When the other loss mechanisms are stripped away this may be the gain medium activated by the low level residual magnetic fields. It was found that one resonant cavity heat treatment produced optimum surface properties and then functioned as a MASER extracting energy from the 2° K thermal bath while cooling the cavity walls. The cavity operating in this mode is a simulator of what can take place in the wider but not colder universe using the cosmic microwave background (CMB) as a thermal source. The low mass, long lifetimes, and the scale of the magnetic spin waves on the weakly magnetized interstellar medium allows energy to be stored that is many orders of magnitude colder than the cosmic microwave background. A linear accelerator cavity becomes a tool to explore the properties of the long wave length magnetic spin waves that populate this cold low energy regime.

  4. Articulation: A Working Paper on Rhetoric and "Taxis"

    ERIC Educational Resources Information Center

    Stormer, Nathan

    2004-01-01

    This essay suggests a way to historicize different rhetorical practices--in effect, alternative ways to write genealogies of diverse rhetorics. A certain distinction between culture and nature is a fundamental organizing concept in humanistic rhetoric that has circumscribed scholars' ability to appreciate rhetoric that does not emanate from the…

  5. Slow Thinking and Deep Learning: Tversky and Kahneman's Taxi Cabs

    ERIC Educational Resources Information Center

    Bedwell, Mike

    2015-01-01

    This article is based on classroom application of a problem story constructed by Amos Tversky in the 1970s. His intention was to evaluate human beings' intuitions about statistical inference. The problem was revisited by his colleague, the Nobel Prize winner Daniel Kahneman. The aim of this article is to show how popular science textbooks can…

  6. MULTISCALE MODELS OF TAXIS-DRIVEN PATTERNING IN BACTERIAL POPULATIONS

    PubMed Central

    XUE, CHUAN; OTHMER, HANS G.

    2009-01-01

    Spatially-distributed populations of various types of bacteria often display intricate spatial patterns that are thought to result from the cellular response to gradients of nutrients or other attractants. In the past decade a great deal has been learned about signal transduction, metabolism and movement in E. coli and other bacteria, but translating the individual-level behavior into population-level dynamics is still a challenging problem. However, this is a necessary step because it is computationally impractical to use a strictly cell-based model to understand patterning in growing populations, since the total number of cells may reach 1012 - 1014 in some experiments. In the past phenomenological equations such as the Patlak-Keller-Segel equations have been used in modeling the cell movement that is involved in the formation of such patterns, but the question remains as to how the microscopic behavior can be correctly described by a macroscopic equation. Significant progress has been made for bacterial species that employ a “run-and-tumble” strategy of movement, in that macroscopic equations based on simplified schemes for signal transduction and turning behavior have been derived [14, 15]. Here we extend previous work in a number of directions: (i) we allow for time-dependent signals, which extends the applicability of the equations to natural environments, (ii) we use a more general turning rate function that better describes the biological behavior, and (iii) we incorporate the effect of hydrodynamic forces that arise when cells swim in close proximity to a surface. We also develop a new approach to solving the moment equations derived from the transport equation that does not involve closure assumptions. Numerical examples show that the solution of the lowest-order macroscopic equation agrees well with the solution obtained from a Monte Carlo simulation of cell movement under a variety of temporal protocols for the signal. We also apply the method to derive equations of chemotactic movement that are governed by multiple chemotactic signals. PMID:19784399

  7. Oxygen taxis and proton motive force in Salmonella typhimurium.

    PubMed

    Shioi, J; Taylor, B L

    1984-09-10

    The aerotactic response of Salmonella typhimurium SL3730 has been quantitatively correlated with a change in the proton motive force (delta p) as measured by a flow-dialysis technique. At pH 7.5, the membrane potential (delta psi) in S. typhimurium changed from -162 +/- 13 to -111 +/- 15 mV when cells grown aerobically were made anaerobic, and it returned to the original value when the cells were returned to aerobiosis. The delta pH across the membrane was zero. At pH 5.5, delta psi was -70 mV in aerobiosis and -20 mV in anaerobiosis, and delta pH was -118 and -56 mV for aerobic and anaerobic cells, respectively. A decrease in delta p resulted in increased tumbling, and an increase in delta p resulted in a smooth swimming response at either pH. Inhibition of aerotaxis at pH 7.5 by various concentrations of KCN correlated with a decreased delta p, due to a decreased delta psi in aerobiosis and little change in delta psi in anaerobiosis. At concentrations up to 100 mM, 2,4-dinitrophenol decreased delta psi, but did not inhibit aerotaxis because the difference between delta psi in aerobic and anaerobic cells remained constant. Considered as a whole, the results indicate that aerotaxis in S. typhimurium is mediated by delta p.

  8. Electron transport-dependent taxis in Rhodobacter sphaeroides.

    PubMed

    Gauden, D E; Armitage, J P

    1995-10-01

    Rhodobacter sphaeroides showed chemotaxis to the terminal electron acceptors oxygen and dimethyl sulfoxide, and the responses to these effectors were shown to be influenced by the relative activities of the different electron transport pathways. R. sphaeroides cells tethered by their flagella showed a step-down response to a decrease in the oxygen or dimethyl sulfoxide concentration when using them as terminal acceptors. Bacteria using photosynthetic electron transport, however, showed a step-down response to oxygen addition. Addition of the proton ionophore carbonyl cyanide 4-trifluoromethoxyphenylhydrazone did not cause a transient behavioral response, although it decreased the electrochemical proton gradient (delta p) and increased the rate of electron transport. However, removal of the ionophore, which caused an increase in delta p and a decrease in the electron transport rate, resulted in a step-down response. Together, these data suggest that behavioral responses of R. sphaeroides to electron transport effectors are caused by changes in the rate of electron transport rather than changes in delta p.

  9. MULTISCALE MODELS OF TAXIS-DRIVEN PATTERNING IN BACTERIAL POPULATIONS.

    PubMed

    Xue, Chuan; Othmer, Hans G

    2009-01-01

    Spatially-distributed populations of various types of bacteria often display intricate spatial patterns that are thought to result from the cellular response to gradients of nutrients or other attractants. In the past decade a great deal has been learned about signal transduction, metabolism and movement in E. coli and other bacteria, but translating the individual-level behavior into population-level dynamics is still a challenging problem. However, this is a necessary step because it is computationally impractical to use a strictly cell-based model to understand patterning in growing populations, since the total number of cells may reach 10(12) - 10(14) in some experiments. In the past phenomenological equations such as the Patlak-Keller-Segel equations have been used in modeling the cell movement that is involved in the formation of such patterns, but the question remains as to how the microscopic behavior can be correctly described by a macroscopic equation. Significant progress has been made for bacterial species that employ a "run-and-tumble" strategy of movement, in that macroscopic equations based on simplified schemes for signal transduction and turning behavior have been derived [14, 15]. Here we extend previous work in a number of directions: (i) we allow for time-dependent signals, which extends the applicability of the equations to natural environments, (ii) we use a more general turning rate function that better describes the biological behavior, and (iii) we incorporate the effect of hydrodynamic forces that arise when cells swim in close proximity to a surface. We also develop a new approach to solving the moment equations derived from the transport equation that does not involve closure assumptions. Numerical examples show that the solution of the lowest-order macroscopic equation agrees well with the solution obtained from a Monte Carlo simulation of cell movement under a variety of temporal protocols for the signal. We also apply the method to derive equations of chemotactic movement that are governed by multiple chemotactic signals.

  10. Control of the receptor for galactose taxis in Salmonella typhimurium.

    PubMed

    Fahnestock, M; Koshland, D E

    1979-02-01

    The chemotactic response to galactose in wild-type Salmonella typhimurium is not inducible by galactose, but is inducible by fucose, a non-metabolizable analog. In a galactokinase mutant, however, the galactose receptor is inducible by galactose. These data indicate that the concentration of free galactose in the cell controls the levels of the galactose receptor. The intensities of the chemotactic responses were found to vary in proportion to the concentration of galactose receptors. In bacteria with higher levels of galactose receptors, the ribose response is inhibited by galactose. This supports the model in which the ribose and galactose receptors compete for a common component of the signaling system.

  11. Big yellow taxi, or, unhealthy terms of trade?

    PubMed

    Broom, Dorothy

    2003-01-01

    International trade agreements, including the General Agreement on Trade in Services, are central elements of globalization. These agreements are likely to have significant implications for population health in rich nations such as Australia as well as in the developing world. But the technical language of the legal agreements and the comparative secrecy of the negotiations and approval procedures make it difficult for most people to be adequately informed about them. Australian public health academics and practitioners must become better informed and more pro-active in their approach to 'free trade' if Australia's public health infrastructure is to be protected from potential legal erosion.

  12. Energy management

    SciTech Connect

    Glenn, J.

    1991-10-01

    This paper is a review of the Department of Energy's (DOE) Contractor Purchasing System Review (CPSR) Program, which oversees the extensive subcontracting activities of the Department's management and operating (M and O) contractors. This review is part of a special GAO audit effort to help ensure that areas vulnerable to fraud, waste, abuse, and mismanagement are identified and that adequate corrective actions are taken. This effort focuses on 16 areas, one of which is DOE contractor oversight. This report describes the subcontracting deficiencies occurring at DOE, identifies shortcomings in DOE's CPSR Program, and discusses the corrective actions that DOE has committed to take in its CPSR Program in response to these findings.

  13. Cytoplasmic pH mediates pH taxis and weak-acid repellent taxis of bacteria.

    PubMed

    Kihara, M; Macnab, R M

    1981-03-01

    Bacteria migrate away from an acid pH and from a number of chemicals, including organic acids such as acetate; the basis for detection of these environmental cues has not been demonstrated. Membrane-permeant weak acids caused prolonged tumbling when added to Salmonella sp. or Escherichia coli cells at pH 5.5. Tethered Salmonella cells went from a prestimulus behavior of 14% clockwise rotation to 80% clockwise rotation when 40 mM acetate was added and remained this way for more than 30 min. A low external pH in the absence of weak acid did not markedly affect steady-state tumbling frequency. Among the weak acids tested, the rank for acidity (salicylate greater than benzoate greater than acetate greater than 5,5-dimethyl-2,4-oxazolidinedione) was the same as the rank for the ability to collapse the transmembrane pH gradient and to cause tumbling. At pH 7.0, the tumbling responses caused by the weak acids were much briefer. Indole, a non-weak-acid repellent, did not cause prolonged tumbling at low pH. Two chemotaxis mutants (a Salmonella mutant defective in the chemotaxis methylesterase and an E. coli mutant defective in the methyl-accepting protein in MCP I) showed inverse responses of enhanced counterclockwise rotation in the first 1 min after acetate addition. The latter mutant had been found previously to be defective in the sensing of gradients of extracellular pH and (at neutral pH) of acetate. We conclude (i) that taxes away from acid pH and membrane-permeant weak acids are both mediated by a pH-sensitive component located either in the cytoplasm or on the cytoplasmic side of the membrane, rather than by an external receptor (as in the case of the attractants), and (ii) that both of these taxes involve components of the chemotaxis methylation system, at least in the early phase of the response.

  14. Annual Energy Review, 2008

    SciTech Connect

    2009-06-01

    The Annual Energy Review (AER) is the Energy Information Administration's (EIA) primary report of annual historical energy statistics. For many series, data begin with the year 1949. Included are statistics on total energy production, consumption, trade, and energy prices; overviews of petroleum, natural gas, coal, electricity, nuclear energy, renewable energy, and international energy; financial and environment indicators; and data unit conversions.

  15. Residential Energy Management Education.

    ERIC Educational Resources Information Center

    Mecca, Stephen J.; Robertshaw, Joseph E.

    1980-01-01

    Describes two formal programs in the area of energy management education: a Residential Energy Management Summer Institute (part of a faculty development program funded by the Department of Energy), and a Residential Energy Management curriculum for Energy Auditors. (CS)

  16. PACOM Energy Initiatives

    DTIC Science & Technology

    2010-06-01

    Fuels Sub-Committee Pacific Energy Exec Review (PEER) - FEMP Support - SPIDERS Energy Security JCTD - PEP21 Unfunded Projects - Asia Pacific Clean Energy Summit...FEMP Support - Unfunded Projects - Asia Pacific Clean Energy Summit - Energy Experimentation Green = established Yellow = new

  17. Energy management

    SciTech Connect

    Dingell, J.D.

    1991-10-01

    In January 1990 GAO began implementing a special audit effort to help ensure that areas vulnerable to fraud, waste, abuse, and mismanagement are identified and that appropriate corrective actions are taken. This effort focuses on 16 areas, one of which is the Department of Energy's (DOE) contracting practices. As part of this effort, the authors determined if contract audits for monitoring and overseeing DOE's contracting process were being performed and that we identify the impact or potential impact to the government when contract audits were not performed. Specifically, this paper discusses audit coverage of DOE's management and operating (M and O) contractors and DOE contracts, the problems that may occur when contract audit activity is not performed, and factors that have impeded contract audit coverage.

  18. Energy awareness luncheon and energy seminar

    SciTech Connect

    1980-07-23

    A separate abstract was prepared for each of the following: the luncheon address, energy-growth-freedom by Kenneth A. Randall; the keynote commentary, by F.S. Patton, program chairman; and four current-awareness papers on the future of oil and gas, coal, nuclear energy, and solar energy. In addition, in a section, Speaking of Energy, very brief statements by eight professional engineers on the energy challenge are included. Also, the NSPE position paper on energy policy is included.

  19. Monthly Energy Review

    EIA Publications

    2017-01-01

    The Monthly Energy Review (MER) is the U.S. Energy Information Administration's primary report of recent energy statistics. Included are total energy production, consumption, and trade; energy prices; overviews of petroleum, natural gas, coal, electricity, nuclear energy, renewable energy, and international petroleum; carbon dioxide emissions; and data unit conversions.

  20. Fusion energy

    NASA Astrophysics Data System (ADS)

    1990-09-01

    The main purpose of the International Thermonuclear Experimental Reactor (ITER) is to develop an experimental fusion reactor through the united efforts of many technologically advanced countries. The ITER terms of reference, issued jointly by the European Community, Japan, the USSR, and the United States, call for an integrated international design activity and constitute the basis of current activities. Joint work on ITER is carried out under the auspices of the International Atomic Energy Agency (IAEA), according to the terms of quadripartite agreement reached between the European Community, Japan, the USSR, and the United States. The site for joint technical work sessions is at the Max Planck Institute of Plasma Physics. Garching, Federal Republic of Germany. The ITER activities have two phases: a definition phase performed in 1988 and the present design phase (1989 to 1990). During the definition phase, a set of ITER technical characteristics and supporting research and development (R and D) activities were developed and reported. The present conceptual design phase of ITER lasts until the end of 1990. The objectives of this phase are to develop the design of ITER, perform a safety and environmental analysis, develop site requirements, define future R and D needs, and estimate cost, manpower, and schedule for construction and operation. A final report will be submitted at the end of 1990. This paper summarizes progress in the ITER program during the 1989 design phase.