A New View on an Old Debate: Type of Cue-Conflict Manipulation and Availability of Stars Can Explain the Discrepancies between Cue-Calibration Experiments with Migratory Songbirds.

PubMed

Sjöberg, Sissel; Muheim, Rachel

2016-01-01

Migratory birds use multiple compass systems for orientation, including a magnetic, star and sun/polarized light compass. To keep these compasses in register, birds have to regularly update them with respect to a common reference. However, cue-conflict studies have revealed contradictory results on the compass hierarchy, favoring either celestial or magnetic compass cues as the primary calibration reference. Both the geomagnetic field and polarized light cues present at sunrise and sunset have been shown to play a role in compass cue integration, and evidence suggests that polarized light cues at sunrise and sunset may provide the primary calibration reference for the other compass systems. We tested whether migratory garden warblers recalibrated their compasses when they were exposed to the natural celestial cues at sunset in a shifted magnetic field, which are conditions that have been shown to be necessary for the use of a compass reference based on polarized light cues. We released the birds on the same evening under a starry sky and followed them by radio tracking. We found no evidence of compass recalibration, even though the birds had a full view of polarized light cues near the horizon at sunset during the cue-conflict exposure. Based on a meta-analysis of the available literature, we propose an extended unifying theory on compass cue hierarchy used by migratory birds to calibrate the different compasses. According to this scheme, birds recalibrate their magnetic compass by sunrise/sunset polarized light cues, provided they have access to the vertically aligned band of maximum polarization near the horizon and a view of landmarks. Once the stars appear in the sky, the birds then recalibrate the star compass with respect of the recalibrated magnetic compass. If sunrise and sunset information can be viewed from the same location, the birds average the information to get a true geographic reference. If polarized light information is not available near the horizon at sunrise or sunset, the birds temporarily transfer the previously calibrated magnetic compass information to the available celestial compasses. We conclude that the type of cue-conflict manipulation and the availability of stars can explain the discrepancies between studies.

A New View on an Old Debate: Type of Cue-Conflict Manipulation and Availability of Stars Can Explain the Discrepancies between Cue-Calibration Experiments with Migratory Songbirds

PubMed Central

Sjöberg, Sissel; Muheim, Rachel

2016-01-01

Migratory birds use multiple compass systems for orientation, including a magnetic, star and sun/polarized light compass. To keep these compasses in register, birds have to regularly update them with respect to a common reference. However, cue-conflict studies have revealed contradictory results on the compass hierarchy, favoring either celestial or magnetic compass cues as the primary calibration reference. Both the geomagnetic field and polarized light cues present at sunrise and sunset have been shown to play a role in compass cue integration, and evidence suggests that polarized light cues at sunrise and sunset may provide the primary calibration reference for the other compass systems. We tested whether migratory garden warblers recalibrated their compasses when they were exposed to the natural celestial cues at sunset in a shifted magnetic field, which are conditions that have been shown to be necessary for the use of a compass reference based on polarized light cues. We released the birds on the same evening under a starry sky and followed them by radio tracking. We found no evidence of compass recalibration, even though the birds had a full view of polarized light cues near the horizon at sunset during the cue-conflict exposure. Based on a meta-analysis of the available literature, we propose an extended unifying theory on compass cue hierarchy used by migratory birds to calibrate the different compasses. According to this scheme, birds recalibrate their magnetic compass by sunrise/sunset polarized light cues, provided they have access to the vertically aligned band of maximum polarization near the horizon and a view of landmarks. Once the stars appear in the sky, the birds then recalibrate the star compass with respect of the recalibrated magnetic compass. If sunrise and sunset information can be viewed from the same location, the birds average the information to get a true geographic reference. If polarized light information is not available near the horizon at sunrise or sunset, the birds temporarily transfer the previously calibrated magnetic compass information to the available celestial compasses. We conclude that the type of cue-conflict manipulation and the availability of stars can explain the discrepancies between studies. PMID:26941631

76 FR 30186 - Proposed Information Collection; Migratory Birds and Wetlands Conservation Grant Programs

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-24

... 7C] Proposed Information Collection; Migratory Birds and Wetlands Conservation Grant Programs AGENCY...). SUPPLEMENTARY INFORMATION: I. Abstract The Division of Bird Habitat Conservation administers grant programs... Migratory Bird Conservation Act (NMBCA), Public Law 106-247. Currently, information that we collect for...

Retinal Structure of Birds of Prey Revealed by Ultra-High Resolution Spectral-Domain Optical Coherence Tomography

PubMed Central

Ruggeri, Marco; Major, James C.; McKeown, Craig; Knighton, Robert W.; Puliafito, Carmen A.

2010-01-01

Purpose. To reveal three-dimensional (3-D) information about the retinal structures of birds of prey in vivo. Methods. An ultra-high resolution spectral-domain optical coherence tomography (SD-OCT) system was built for in vivo imaging of retinas of birds of prey. The calibrated imaging depth and axial resolution of the system were 3.1 mm and 2.8 μm (in tissue), respectively. 3-D segmentation was performed for calculation of the retinal nerve fiber layer (RNFL) map. Results. High-resolution OCT images were obtained of the retinas of four species of birds of prey: two diurnal hawks (Buteo platypterus and Buteo brachyurus) and two nocturnal owls (Bubo virginianus and Strix varia). These images showed the detailed retinal anatomy, including the retinal layers and the structure of the deep and shallow foveae. The calculated thickness map showed the RNFL distribution. Traumatic injury to one bird's retina was also successfully imaged. Conclusions. Ultra-high resolution SD-OCT provides unprecedented high-quality 2-D and 3-D in vivo visualization of the retinal structures of birds of prey. SD-OCT is a powerful imaging tool for vision research in birds of prey. PMID:20554605

Do Farmers Using Conventional and Non-Conventional Systems of Agriculture Have Different Perceptions of the Diversity of Wild Birds? Implications for Conservation.

PubMed

Silva-Andrade, Horasa Lima; de Andrade, Luciano Pires; Muniz, Lauana Souza; Telino-Júnior, Wallace Rodrigues; Albuquerque, Ulysses Paulino; Lyra-Neves, Rachel Maria

2016-01-01

Farmers' perceptions of birds' interactions with agricultural production systems are fundamental to species conservation efforts. In the present study, we evaluated the perceptions of birds held by farmers who engage in conventional and non-conventional agricultural production processes and the implications of potential differences in these perceptions on species conservation. To accomplish this, data were collected using questionnaires, semi-structured interviews, and other complementary sources of information gathered from 191 farmers in northeastern Brazil. Although some similarities were identified among the farmers in their perceptions and local ecological knowledge (LEK) of birds, differences existed between the conventional and non-conventional farmers in their attitudes toward, conflicts with, and usage of bird species. Compared to the conventional farmers, the non-conventional farmers could identify more bird species, possessed more favorable attitudes toward birds, and engaged in practices more beneficial to the conservation of avifauna. The perceptions that were identified were related to the type of agriculture practiced, and such perceptions may affect the conservation of bird species. Therefore, the adoption of certain agricultural practices has important implications for conservation. Our results indicate the need for investment in public policies, programs and actions that account for farmers' knowledge and perceptions. Such investments will contribute to the development and adoption of practices supporting wild bird conservation in agricultural areas.

Understanding the migratory orientation program of birds: extending laboratory studies to study free-flying migrants in a natural setting.

PubMed

Thorup, Kasper; Holland, Richard A; Tøttrup, Anders P; Wikelski, Martin

2010-09-01

For many years, orientation in migratory birds has primarily been studied in the laboratory. Although a laboratory-based setting enables greater control over environmental cues, the laboratory-based findings must be confirmed in the wild in free-flying birds to be able to fully understand how birds orient during migration. Despite the difficulties associated with following free-flying birds over long distances, a number of possibilities currently exist for tracking the long distance, sometimes even globe-spanning, journeys undertaken by migrating birds. Birds fitted with radio transmitters can either be located from the ground or from aircraft (conventional tracking), or from space. Alternatively, positional information obtained by onboard equipment (e.g., GPS units) can be transmitted to receivers in space. Use of these tracking methods has provided a wealth of information on migratory behaviors that are otherwise very difficult to study. Here, we focus on the progress in understanding certain components of the migration-orientation system. Comparably exciting results can be expected in the future from tracking free-flying migrants in the wild. Use of orientation cues has been studied in migrating raptors (satellite telemetry) and thrushes (conventional telemetry), highlighting that findings in the natural setting may not always be as expected on the basis of cage-experiments. Furthermore, field tracking methods combined with experimental approaches have finally allowed for an extension of the paradigmatic displacement experiments performed by Perdeck in 1958 on the short-distance, social migrant, the starling, to long-distance migrating storks and long-distance, non-socially migrating passerines. Results from these studies provide fundamental insights into the nature of the migratory orientation system that enables experienced birds to navigate and guide inexperienced, young birds to their species-specific winter grounds. © The Author 2010. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved.

The role of the pineal gland in the photoperiodic control of bird song frequency and repertoire in the house sparrow, Passer domesticus.

PubMed

Wang, Gang; Harpole, Clifford E; Paulose, Jiffin; Cassone, Vincent M

2014-04-01

Temperate zone birds are highly seasonal in many aspects of their physiology. In mammals, but not in birds, the pineal gland is an important component regulating seasonal patterns of primary gonadal functions. Pineal melatonin in birds instead affects seasonal changes in brain song control structures, suggesting the pineal gland regulates seasonal song behavior. The present study tests the hypothesis that the pineal gland transduces photoperiodic information to the control of seasonal song behavior to synchronize this important behavior to the appropriate phenology. House sparrows, Passer domesticus, expressed a rich array of vocalizations ranging from calls to multisyllabic songs and motifs of songs that varied under a regimen of different photoperiodic conditions that were simulated at different times of year. Control (SHAM) birds exhibited increases in song behavior when they were experimentally transferred from short days, simulating winter, to equinoctial and long days, simulating summer, and decreased vocalization when they were transferred back to short days. When maintained in long days for longer periods, the birds became reproductively photorefractory as measured by the yellowing of the birds' bills; however, song behavior persisted in the SHAM birds, suggesting a dissociation of reproduction from the song functions. Pinealectomized (PINX) birds expressed larger, more rapid increases in daily vocal rate and song repertoire size than did the SHAM birds during the long summer days. These increases gradually declined upon the extension of the long days and did not respond to the transfer to short days as was observed in the SHAM birds, suggesting that the pineal gland conveys photoperiodic information to the vocal control system, which in turn regulates song behavior. Copyright © 2014 Elsevier Inc. All rights reserved.

Integrating the distributed data resources of the bird monitoring community using information technology strategies

Treesearch

Steve Kelling; Craig Stewart

2005-01-01

An increasing number of bird monitoring projects are assembling massive quantities of data into numerous decentralized and locally administered storage systems. These data sources have enormous significance to a wide range of disciplines, but knowing that they exist and gaining access to them is difficult if not impossible. Attempts are being made to organize these...

Bird sound spectrogram decomposition through Non-Negative Matrix Factorization for the acoustic classification of bird species.

PubMed

Ludeña-Choez, Jimmy; Quispe-Soncco, Raisa; Gallardo-Antolín, Ascensión

2017-01-01

Feature extraction for Acoustic Bird Species Classification (ABSC) tasks has traditionally been based on parametric representations that were specifically developed for speech signals, such as Mel Frequency Cepstral Coefficients (MFCC). However, the discrimination capabilities of these features for ABSC could be enhanced by accounting for the vocal production mechanisms of birds, and, in particular, the spectro-temporal structure of bird sounds. In this paper, a new front-end for ABSC is proposed that incorporates this specific information through the non-negative decomposition of bird sound spectrograms. It consists of the following two different stages: short-time feature extraction and temporal feature integration. In the first stage, which aims at providing a better spectral representation of bird sounds on a frame-by-frame basis, two methods are evaluated. In the first method, cepstral-like features (NMF_CC) are extracted by using a filter bank that is automatically learned by means of the application of Non-Negative Matrix Factorization (NMF) on bird audio spectrograms. In the second method, the features are directly derived from the activation coefficients of the spectrogram decomposition as performed through NMF (H_CC). The second stage summarizes the most relevant information contained in the short-time features by computing several statistical measures over long segments. The experiments show that the use of NMF_CC and H_CC in conjunction with temporal integration significantly improves the performance of a Support Vector Machine (SVM)-based ABSC system with respect to conventional MFCC.

Bird sound spectrogram decomposition through Non-Negative Matrix Factorization for the acoustic classification of bird species

PubMed Central

Quispe-Soncco, Raisa

2017-01-01

Feature extraction for Acoustic Bird Species Classification (ABSC) tasks has traditionally been based on parametric representations that were specifically developed for speech signals, such as Mel Frequency Cepstral Coefficients (MFCC). However, the discrimination capabilities of these features for ABSC could be enhanced by accounting for the vocal production mechanisms of birds, and, in particular, the spectro-temporal structure of bird sounds. In this paper, a new front-end for ABSC is proposed that incorporates this specific information through the non-negative decomposition of bird sound spectrograms. It consists of the following two different stages: short-time feature extraction and temporal feature integration. In the first stage, which aims at providing a better spectral representation of bird sounds on a frame-by-frame basis, two methods are evaluated. In the first method, cepstral-like features (NMF_CC) are extracted by using a filter bank that is automatically learned by means of the application of Non-Negative Matrix Factorization (NMF) on bird audio spectrograms. In the second method, the features are directly derived from the activation coefficients of the spectrogram decomposition as performed through NMF (H_CC). The second stage summarizes the most relevant information contained in the short-time features by computing several statistical measures over long segments. The experiments show that the use of NMF_CC and H_CC in conjunction with temporal integration significantly improves the performance of a Support Vector Machine (SVM)-based ABSC system with respect to conventional MFCC. PMID:28628630

Do Farmers Using Conventional and Non-Conventional Systems of Agriculture Have Different Perceptions of the Diversity of Wild Birds? Implications for Conservation

PubMed Central

de Andrade, Luciano Pires; Muniz, Lauana Souza; Telino-Júnior, Wallace Rodrigues; Albuquerque, Ulysses Paulino; Lyra-Neves, Rachel Maria

2016-01-01

Farmers’ perceptions of birds’ interactions with agricultural production systems are fundamental to species conservation efforts. In the present study, we evaluated the perceptions of birds held by farmers who engage in conventional and non-conventional agricultural production processes and the implications of potential differences in these perceptions on species conservation. To accomplish this, data were collected using questionnaires, semi-structured interviews, and other complementary sources of information gathered from 191 farmers in northeastern Brazil. Although some similarities were identified among the farmers in their perceptions and local ecological knowledge (LEK) of birds, differences existed between the conventional and non-conventional farmers in their attitudes toward, conflicts with, and usage of bird species. Compared to the conventional farmers, the non-conventional farmers could identify more bird species, possessed more favorable attitudes toward birds, and engaged in practices more beneficial to the conservation of avifauna. The perceptions that were identified were related to the type of agriculture practiced, and such perceptions may affect the conservation of bird species. Therefore, the adoption of certain agricultural practices has important implications for conservation. Our results indicate the need for investment in public policies, programs and actions that account for farmers’ knowledge and perceptions. Such investments will contribute to the development and adoption of practices supporting wild bird conservation in agricultural areas. PMID:27243222

Primordial germ cell-mediated transgenesis and genome editing in birds.

PubMed

Han, Jae Yong; Park, Young Hyun

2018-01-01

Transgenesis and genome editing in birds are based on a unique germline transmission system using primordial germ cells (PGCs), which is quite different from the mammalian transgenic and genome editing system. PGCs are progenitor cells of gametes that can deliver genetic information to the next generation. Since avian PGCs were first discovered in nineteenth century, there have been numerous efforts to reveal their origin, specification, and unique migration pattern, and to improve germline transmission efficiency. Recent advances in the isolation and in vitro culture of avian PGCs with genetic manipulation and genome editing tools enable the development of valuable avian models that were unavailable before. However, many challenges remain in the production of transgenic and genome-edited birds, including the precise control of germline transmission, introduction of exogenous genes, and genome editing in PGCs. Therefore, establishing reliable germline-competent PGCs and applying precise genome editing systems are critical current issues in the production of avian models. Here, we introduce a historical overview of avian PGCs and their application, including improved techniques and methodologies in the production of transgenic and genome-edited birds, and we discuss the future potential applications of transgenic and genome-edited birds to provide opportunities and benefits for humans.

Modeling Bird Migration in Changing Habitats: Space-based Ornithology using Satellites and GIS

NASA Technical Reports Server (NTRS)

Smith, James A.; Deppe, Jill L.

2008-01-01

Understanding bird migration and avian biodiversity is one of the most compelling and challenging problems of modern biology with major implications for human health and conservation biology. Migration and conservation efforts cross national boundaries and are subject to numerous international agreements and treaties presenting challenges in both geographic space and time. Space based technology, coupled with geographic information systems, yields new opportunities to shed light on the distribution and movement of organisms on the planet and their sensitivity to human disturbances and environmental changes. At NASA, we are creating ecological forecasting tools for science and application users to address the consequences of loss of wetlands, flooding, drought or other natural disasters such as hurricanes on avian biodiversity and bird migration. In our work, we use individual organism biophysical models and drive these models with satellite observations and numerical weather predictions of the spatio-temporal gradients in climate and habitat. Geographic information system technology comprises one component of our overall simulation framework, especially for characterizing the changing habitats and conditions encountered by en-route migratory birds. Simulation provides a tool for studying bird migration across multiple scales and can be linked to mechanistic processes describing the time and energy budget states of migrating birds. Such models yield an understanding of how a migratory flyway and its component habitats function as a whole and link stop-over ecology with biological conservation and management. We present examples of our simulation of shorebirds, principally, pectoral sandpipers, along the central flyways of the United States and Canada from the Gulf of Mexico to Alaska.

An Information Storage and Retrieval System for Biological and Geological Data. Interim Report.

ERIC Educational Resources Information Center

Squires, Donald F.

A project is being conducted to test the feasibility of an information storage and retrieval system for museum specimen data, particularly for natural history museums. A pilot data processing system has been developed, with the specimen records from the national collections of birds, marine crustaceans, and rocks used as sample data. The research…

Incorporating evolutionary measures into conservation prioritization.

PubMed

Redding, David W; Mooers, Arne Ø

2006-12-01

Conservation prioritization is dominated by the threat status of candidate species. However, species differ markedly in the shared genetic information they embody, and this information is not taken into account if species are prioritized by threat status alone. We developed a system of prioritization that incorporates both threat status and genetic information and applied it to 9546 species of birds worldwide. We devised a simple measure of a species' genetic value that takes into account the shape of the entire taxonomic tree of birds. This measure approximates the evolutionary history that each species embodies and sums to the phylogenetic diversity of the entire taxonomic tree. We then combined this genetic value with each species' probability of extinction to create a species-specific measure of expected loss of genetic information. The application of our methods to the world's avifauna showed that ranking species by expected loss of genetic information may help preserve bird evolutionary history by upgrading those threatened species with fewer close relatives. We recommend developing a mechanism to incorporate a species' genetic value into the prioritization framework.

Roadside versus remote: Is the habitat sampled by the Breeding Bird Survey in Maryland representative of statewide conditions?

USGS Publications Warehouse

Boone, D.D.; Sauer, J.R.; Thomas, I.; Handley, Lawrence R.; D'Erchia, Frank J.; Charron, Tammy M.

2000-01-01

The North American Breeding Bird Survey (BBS) has received criticism that the bird habitat sampled along the 24.5 mile long roadside transects may not be proportional to regional totals. If true, trends in bird populations recorded by the BBS may not be sensitive predictors of regional or continental change in songbird abundance. To test whether the approximately 60 BBS routes in Maryland representatively sample the state's habitat, a geographic information system (GIS) database was compiled of significant bird habitat identified from remotely sensed landcover and land-use information (e.g., Multi-Resolution Land Characteristics Consortiumclassified Landsat Thematic Mapper imagery, etc.). These GIS data layers were analyzed to determine the statewide acreage of identified habitats as well as the acreage in each of the major physiographic regions of Maryland. Regional and statewide totals were also extracted for the subsample of habitat within 30 m of the BBS transects. The results of the comparison of regional and statewide habitat totals with the BBS sample showed very low proportional difference for nearly all of the identified habitat parameters. For Maryland and perhaps other urbanizing states, the BBS provides an accurate sample of available songbird habitats.

Integrating brain, behavior, and phylogeny to understand the evolution of sensory systems in birds

PubMed Central

Wylie, Douglas R.; Gutiérrez-Ibáñez, Cristian; Iwaniuk, Andrew N.

2015-01-01

The comparative anatomy of sensory systems has played a major role in developing theories and principles central to evolutionary neuroscience. This includes the central tenet of many comparative studies, the principle of proper mass, which states that the size of a neural structure reflects its processing capacity. The size of structures within the sensory system is not, however, the only salient variable in sensory evolution. Further, the evolution of the brain and behavior are intimately tied to phylogenetic history, requiring studies to integrate neuroanatomy with behavior and phylogeny to gain a more holistic view of brain evolution. Birds have proven to be a useful group for these studies because of widespread interest in their phylogenetic relationships and a wealth of information on the functional organization of most of their sensory pathways. In this review, we examine the principle of proper mass in relation differences in the sensory capabilities among birds. We discuss how neuroanatomy, behavior, and phylogeny can be integrated to understand the evolution of sensory systems in birds providing evidence from visual, auditory, and somatosensory systems. We also consider the concept of a “trade-off,” whereby one sensory system (or subpathway within a sensory system), may be expanded in size, at the expense of others, which are reduced in size. PMID:26321905

Birds as predators in tropical agroforestry systems.

PubMed

Van Bael, Sunshine A; Philpott, Stacy M; Greenberg, Russell; Bichier, Peter; Barber, Nicholas A; Mooney, Kailen A; Gruner, Daniel S

2008-04-01

Insectivorous birds reduce arthropod abundances and their damage to plants in some, but not all, studies where predation by birds has been assessed. The variation in bird effects may be due to characteristics such as plant productivity or quality, habitat complexity, and/or species diversity of predator and prey assemblages. Since agroforestry systems vary in such characteristics, these systems provide a good starting point for understanding when and where we can expect predation by birds to be important. We analyze data from bird exclosure studies in forests and agroforestry systems to ask whether birds consistently reduce their arthropod prey base and whether bird predation differs between forests and agroforestry systems. Further, we focus on agroforestry systems to ask whether the magnitude of bird predation (1) differs between canopy trees and understory plants, (2) differs when migratory birds are present or absent, and (3) correlates with bird abundance and diversity. We found that, across all studies, birds reduce all arthropods, herbivores, carnivores, and plant damage. We observed no difference in the magnitude of bird effects between agroforestry systems and forests despite simplified habitat structure and plant diversity in agroforests. Within agroforestry systems, bird reduction of arthropods was greater in the canopy than the crop layer. Top-down effects of bird predation were especially strong during censuses when migratory birds were present in agroforestry systems. Importantly, the diversity of the predator assemblage correlated with the magnitude of predator effects; where the diversity of birds, especially migratory birds, was greater, birds reduced arthropod densities to a greater extent. We outline potential mechanisms for relationships between bird predator, insect prey, and habitat characteristics, and we suggest future studies using tropical agroforests as a model system to further test these areas of ecological theory.

Predicting bird response to alternative management scenarios on a ranch in Campeche, Mexico

USGS Publications Warehouse

Wood, P.A.; Dawson, D.K.; Sauer, J.R.; Wilson, M.H.; Ralph, C. John; Rich, Terrell D.

2005-01-01

We developed models to predict the potential response of wintering Neotropical migrant and resident bird species to alternative management scenarios, using data from point counts of birds along with habitat variables measured or estimated from remotely sensed data in a Geographic Information System. Expected numbers of occurrences at points were calculated for 100 species of birds, under current habitat conditions and under habitat conditions that would result from seven alternative management scenarios for Rancho Sandoval, a cattle ranch and private nature reserve in Campeche, Mexico. Most bird species of conservation concern would benefit from management scenarios that increase the amount of forest, but the highest priority resident species would not. To balance the somewhat conflicting habitat needs of these species and the concerns of ranch managers, we recommend that forest area and connectivity be increased, and pastures be maintained but more efficiently managed to support cattle and the priority resident and migrant birds that require open habitats.

True navigation in migrating gulls requires intact olfactory nerves

PubMed Central

Wikelski, Martin; Arriero, Elena; Gagliardo, Anna; Holland, Richard A.; Huttunen, Markku J.; Juvaste, Risto; Mueller, Inge; Tertitski, Grigori; Thorup, Kasper; Wild, Martin; Alanko, Markku; Bairlein, Franz; Cherenkov, Alexander; Cameron, Alison; Flatz, Reinhard; Hannila, Juhani; Hüppop, Ommo; Kangasniemi, Markku; Kranstauber, Bart; Penttinen, Maija-Liisa; Safi, Kamran; Semashko, Vladimir; Schmid, Heidi; Wistbacka, Ralf

2015-01-01

During migratory journeys, birds may become displaced from their normal migratory route. Experimental evidence has shown that adult birds can correct for such displacements and return to their goal. However, the nature of the cues used by migratory birds to perform long distance navigation is still debated. In this experiment we subjected adult lesser black-backed gulls migrating from their Finnish/Russian breeding grounds (from >60°N) to Africa (to < 5°N) to sensory manipulation, to determine the sensory systems required for navigation. We translocated birds westward (1080 km) or eastward (885 km) to simulate natural navigational challenges. When translocated westwards and outside their migratory corridor birds with olfactory nerve section kept a clear directional preference (southerly) but were unable to compensate for the displacement, while intact birds and gulls with the ophthalmic branch of the trigeminal nerve sectioned oriented towards their population-specific migratory corridor. Thus, air-borne olfactory information seems to be important for migrating gulls to navigate successfully in some circumstances. PMID:26597351

True navigation in migrating gulls requires intact olfactory nerves.

PubMed

Wikelski, Martin; Arriero, Elena; Gagliardo, Anna; Holland, Richard A; Huttunen, Markku J; Juvaste, Risto; Mueller, Inge; Tertitski, Grigori; Thorup, Kasper; Wild, Martin; Alanko, Markku; Bairlein, Franz; Cherenkov, Alexander; Cameron, Alison; Flatz, Reinhard; Hannila, Juhani; Hüppop, Ommo; Kangasniemi, Markku; Kranstauber, Bart; Penttinen, Maija-Liisa; Safi, Kamran; Semashko, Vladimir; Schmid, Heidi; Wistbacka, Ralf

2015-11-24

During migratory journeys, birds may become displaced from their normal migratory route. Experimental evidence has shown that adult birds can correct for such displacements and return to their goal. However, the nature of the cues used by migratory birds to perform long distance navigation is still debated. In this experiment we subjected adult lesser black-backed gulls migrating from their Finnish/Russian breeding grounds (from >60°N) to Africa (to < 5°N) to sensory manipulation, to determine the sensory systems required for navigation. We translocated birds westward (1080 km) or eastward (885 km) to simulate natural navigational challenges. When translocated westwards and outside their migratory corridor birds with olfactory nerve section kept a clear directional preference (southerly) but were unable to compensate for the displacement, while intact birds and gulls with the ophthalmic branch of the trigeminal nerve sectioned oriented towards their population-specific migratory corridor. Thus, air-borne olfactory information seems to be important for migrating gulls to navigate successfully in some circumstances.

Calibration of magnetic and celestial compass cues in migratory birds--a review of cue-conflict experiments.

PubMed

Muheim, Rachel; Moore, Frank R; Phillips, John B

2006-01-01

Migratory birds use multiple sources of compass information for orientation, including the geomagnetic field, the sun, skylight polarization patterns and star patterns. In this paper we review the results of cue-conflict experiments designed to determine the relative importance of the different compass mechanisms, and how directional information from these compass mechanisms is integrated. We focus on cue-conflict experiments in which the magnetic field was shifted in alignment relative to natural celestial cues. Consistent with the conclusions of earlier authors, our analyses suggest that during the premigratory season, celestial information is given the greatest salience and used to recalibrate the magnetic compass by both juvenile and adult birds. Sunset polarized light patterns from the region of the sky near the horizon appear to provide the calibration reference for the magnetic compass. In contrast, during migration, a majority of experiments suggest that birds rely on the magnetic field as the primary source of compass information and use it to calibrate celestial compass cues, i.e. the relative saliency of magnetic and celestial cues is reversed. An alternative possibility, however, is suggested by several experiments in which birds exposed to a cue conflict during migration appear to have recalibrated the magnetic compass, i.e. their response is similar to that of birds exposed to cue conflicts during the premigratory season. The general pattern to emerge from these analyses is that birds exposed to the cue conflict with a view of the entire sunset sky tended to recalibrate the magnetic compass, regardless of whether the cue conflict occurred during the premigratory or migratory period. In contrast, birds exposed to the cue conflict in orientation funnels and registration cages that restricted their view of the region of sky near the horizon (as was generally the case in experiments carried out during the migratory season) did not recalibrate the magnetic compass but, instead, used the magnetic compass to calibrate the other celestial compass systems. If access to critical celestial cues, rather than the timing of exposure to the cue conflict (i.e. premigratory vs migratory), determines whether recalibration of the magnetic compass occurs, this suggests that under natural conditions there may be a single calibration reference for all of the compass systems of migratory birds that is derived from sunset (and possibly also sunrise) polarized light cues from the region of sky near the horizon. In cue-conflict experiments carried out during the migratory season, there was also an interesting asymmetry in the birds' response to magnetic fields shifted clockwise and counterclockwise relative to celestial cues. We discuss two possible explanations for these differences: (1) lateral asymmetry in the role of the right and left eye in mediating light-dependent magnetic compass orientation and (2) interference from the spectral and intensity distribution of skylight at sunset with the response of the light-dependent magnetic compass.

Observing Flat Birds and Other Fun Birding Activities for K-12 Students.

ERIC Educational Resources Information Center

Matthews, Catherine E.; Connors, John

2002-01-01

Introduces the concept of the flat bird, which is a life-size color cutout of a bird, and uses flat birds to introduce the study of birds. Includes suggestions for teaching about common characteristics of birds and information on resource materials. (YDS)

Avian magnetoreception: elaborate iron mineral containing dendrites in the upper beak seem to be a common feature of birds.

PubMed

Falkenberg, Gerald; Fleissner, Gerta; Schuchardt, Kirsten; Kuehbacher, Markus; Thalau, Peter; Mouritsen, Henrik; Heyers, Dominik; Wellenreuther, Gerd; Fleissner, Guenther

2010-02-16

The magnetic field sensors enabling birds to extract orientational information from the Earth's magnetic field have remained enigmatic. Our previously published results from homing pigeons have made us suggest that the iron containing sensory dendrites in the inner dermal lining of the upper beak are a candidate structure for such an avian magnetometer system. Here we show that similar structures occur in two species of migratory birds (garden warbler, Sylvia borin and European robin, Erithacus rubecula) and a non-migratory bird, the domestic chicken (Gallus gallus). In all these bird species, histological data have revealed dendrites of similar shape and size, all containing iron minerals within distinct subcellular compartments of nervous terminals of the median branch of the Nervus ophthalmicus. We also used microscopic X-ray absorption spectroscopy analyses to identify the involved iron minerals to be almost completely Fe III-oxides. Magnetite (Fe II/III) may also occur in these structures, but not as a major Fe constituent. Our data suggest that this complex dendritic system in the beak is a common feature of birds, and that it may form an essential sensory basis for the evolution of at least certain types of magnetic field guided behavior.

Apple orchard pest control strategies affect bird communities in southeastern France.

PubMed

Bouvier, Jean-Charles; Ricci, Benoît; Agerberg, Julia; Lavigne, Claire

2011-01-01

Birds are regarded as appropriate biological indicators of how changes in agricultural practices affect the environment. They are also involved in the biocontrol of pests. In the present study, we provide an assessment of the impact of pest control strategies on bird communities in apple orchards in southeastern France. We compared the structure (abundance, species richness, and diversity) of breeding bird communities in 15 orchards under conventional or organic pest control over a three-year period (2003-2005). Pest control strategies and their evolution over time were characterized by analyzing farmers' treatment schedules. The landscape surrounding the orchards was characterized using a Geographic Information System. We observed 30 bird species overall. Bird abundance, species richness, and diversity were all affected by pest control strategies, and were highest in organic orchards and lowest in conventional orchards during the three study years. The pest control strategy affected insectivores more than granivores. We further observed a tendency for bird communities in integrated pest management orchards to change over time and become increasingly different from communities in organic orchards, which also corresponded to changes in treatment schedules. These findings indicate that within-orchard bird communities may respond quickly to changes in pesticide use and may, in turn, influence biocontrol of pests by birds. © 2010 SETAC.

People and Decisions: Meeting the Information Needs of Managers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Blake, J.I.; LeMaster, E.

2000-10-01

The information needs of managers with respect to avian species at the SRS are identified. The process by which information is integrated into decision making are discussed. Numerous studies of upland bird species at SRS were conducted as part of the DOE Biodiversity Program. This information is being incorporated into biological assessments and plan through modeling and geographic information systems.

Developing Spatially Explicit Habitat Models for Grassland Bird Conservation Planning in the Prairie Pothole Region of North Dakota

Treesearch

Neal D. Niemuth; Michael E. Estey; Charles R. Loesch

2005-01-01

Conservation planning for birds is increasingly focused on landscapes. However, little spatially explicit information is available to guide landscape-level conservation planning for many species of birds. We used georeferenced 1995 Breeding Bird Survey (BBS) data in conjunction with land-cover information to develop a spatially explicit habitat model predicting the...

[Book review] Birds in Europe: Population estimates, trends and conservation status

USGS Publications Warehouse

Peterjohn, Bruce G.

2006-01-01

Effective bird conservation requires knowledge of distribution, relative abundance, and population trends at multiple geographic scales. Obtaining this information for a continental avifauna poses considerable challenges, especially in Europe with its 52 countries, numerous languages and cultures, and disparate resources available for monitoring bird populations within each country. Synthesizing the available information on the status and trends of all European birds into a single volume is an enormous yet essential task necessary to direct bird conservation activities across the continent.

Different ranking of avian colors predicted by modeling of retinal function in humans and birds.

PubMed

Håstad, Olle; Odeen, Anders

2008-06-01

Abstract: Only during the past decade have vision-system-neutral methods become common practice in studies of animal color signals. Consequently, much of the current knowledge on sexual selection is based directly or indirectly on human vision, which may or may not emphasize spectral information in a signal differently from the intended receiver. In an attempt to quantify this discrepancy, we used retinal models to test whether human and bird vision rank plumage colors similarly. Of 67 species, human and bird models disagreed in 26 as to which pair of patches in the plumage provides the strongest color contrast or which male in a random pair is the more colorful. These results were only partly attributable to human UV blindness. Despite confirming a strong correlation between avian and human color discrimination, we conclude that a significant proportion of the information in avian visual signals may be lost in translation.

DEVELOPMENT OF A BIRD INTEGRITY INDEX: USING BIRD ASSEMBLAGES AS INDICATORS OF RIPARIAN CONDITION

EPA Science Inventory

We describe the development of a Bird Integrity Index (BII) that uses bird assemblage information to assess human impacts on 13 stream reaches in the Willamette Valley, Oregon. We used bird survey field data to test 62 candidate metrics representing aspects of bird taxonomic ric...

75 FR 29917 - Migratory Bird Permits; Changes in the Regulations Governing Migratory Bird Rehabilitation

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-28

...-1231-9BPP] RIN 1018-AX09 Migratory Bird Permits; Changes in the Regulations Governing Migratory Bird... governing migratory bird rehabilitation in the United States. Before creation of those regulations.... FOR FURTHER INFORMATION CONTACT: Dr. George T. Allen, Division of Migratory Bird Management, U.S. Fish...

A bird strike handbook for base-level managers

NASA Astrophysics Data System (ADS)

Payson, R. P.; Vance, J. D.

1984-09-01

To help develop more awareness about bird strikes and bird strike reduction techniques, this thesis compiled all relevant information through an extensive literature search, review of base-level documents, and personal interviews. The final product--A Bird Strike Handbook for Base-Level Managers--provides information on bird strike statistics, methods to reduce the strike hazards, and means to obtain additional assistance. The handbook is organized for use by six major base agencies: Maintenance, Civil Engineering, Operations, Air Field Management, Safety, and Air Traffic Control. An appendix follows at the end.

Enhancing bird banding information sharing across the western hemishpere

USGS Publications Warehouse

Rojo, A.; Berlanga, H.; Howes, L.; Tomosy, M.

2007-01-01

Bird banding and marking provide indispensable tools for ornithological research, management, and conservation of migratory birds and their habitats along migratory routes, breeding and non-breeding grounds. With the growing interest in international coordination of tracking bird movements, coordination amongst developing and existing programs is essential for effective data management. The North American Bird Banding Program (Canadian Bird Banding Office and U.S. Bird Banding Laboratory and the Mexican government) has been working to enhance collaboration with other Western Hemisphere countries to establish a voluntary bird banding communication network. This network addresses challenges, such as: demonstrating how sharing banding expertise and information management can support the stewardship of Western Hemisphere migratory birds, ensuring that valuable banding and encounter data are captured and shared. With increasing numbers of international scientific and conservation initiatives, bird banding and marking programs must provide essential international coordination functions as well as support local activities by facilitating access to bands, training, data management and encounter reporting.

Bird use of organic apple orchards: Frugivory, pest control and implications for production

PubMed Central

Pejchar, Liba; Werner, Scott J.

2017-01-01

As the largest terrestrial biomes, crop and pasturelands can have very large positive or negative impacts on biodiversity and human well-being. Understanding how animals use and impact agroecosystems is important for making informed decisions that achieve conservation and production outcomes. Yet, few studies examine the tradeoffs associated with wildlife in agricultural systems. We examined bird use of organic apple orchards as well as how birds influence fruit production positively through control of an economically important insect pest (codling moth (Cydia pomonella)) and negatively through fruit damage. We conducted transect surveys, observed bird frugivory and assessed bird and insect damage with an exclosure experiment in small organic farms in western Colorado. We found that organic apple orchards in this region provide habitat for a large number of both human-adapted and human-sensitive species and that the species in orchards were relatively similar to adjacent hedgerow habitats. Habitat use did not vary as a function of orchard characteristics, and apple damage by both birds and C. pomonella was consistent within and across apple blocks that varied in size. A small subset of bird species was observed foraging on apples yet the effect of birds as agents of fruit damage appeared rather minor and birds did not reduce C. pomonella damage. Our results demonstrate that organic apple orchards have the potential to provide habitat for diverse bird communities, including species typically sensitive to human activities, with little apparent effect on production. PMID:28910290

Activation Changes in Zebra Finch (Taeniopygia guttata) Brain Areas Evoked by Alterations of the Earth Magnetic Field

PubMed Central

Keary, Nina; Bischof, Hans-Joachim

2012-01-01

Many animals are able to perceive the earth magnetic field and to use it for orientation and navigation within the environment. The mechanisms underlying the perception and processing of magnetic field information within the brain have been thoroughly studied, especially in birds, but are still obscure. Three hypotheses are currently discussed, dealing with ferromagnetic particles in the beak of birds, with the same sort of particles within the lagena organs, or describing magnetically influenced radical-pair processes within retinal photopigments. Each hypothesis is related to a well-known sensory organ and claims parallel processing of magnetic field information with somatosensory, vestibular and visual input, respectively. Changes in activation within nuclei of the respective sensory systems have been shown previously. Most of these previous experiments employed intensity enhanced magnetic stimuli or lesions. We here exposed unrestrained zebra finches to either a stationary or a rotating magnetic field of the local intensity and inclination. C-Fos was used as an activity marker to examine whether the two treatments led to differences in fourteen brain areas including nuclei of the somatosensory, vestibular and visual system. An ANOVA revealed an overall effect of treatment, indicating that the magnetic field change was perceived by the birds. While the differences were too small to be significant in most areas, a significant enhancement of activation by the rotating stimulus was found in a hippocampal subdivision. Part of the hyperpallium showed a strong, nearly significant, increase. Our results are compatible with previous studies demonstrating an involvement of at least three different sensory systems in earth magnetic field perception and suggest that these systems, probably less elaborated, may also be found in nonmigrating birds. PMID:22679515

Activation changes in zebra finch (Taeniopygia guttata) brain areas evoked by alterations of the earth magnetic field.

PubMed

Keary, Nina; Bischof, Hans-Joachim

2012-01-01

Many animals are able to perceive the earth magnetic field and to use it for orientation and navigation within the environment. The mechanisms underlying the perception and processing of magnetic field information within the brain have been thoroughly studied, especially in birds, but are still obscure. Three hypotheses are currently discussed, dealing with ferromagnetic particles in the beak of birds, with the same sort of particles within the lagena organs, or describing magnetically influenced radical-pair processes within retinal photopigments. Each hypothesis is related to a well-known sensory organ and claims parallel processing of magnetic field information with somatosensory, vestibular and visual input, respectively. Changes in activation within nuclei of the respective sensory systems have been shown previously. Most of these previous experiments employed intensity enhanced magnetic stimuli or lesions. We here exposed unrestrained zebra finches to either a stationary or a rotating magnetic field of the local intensity and inclination. C-Fos was used as an activity marker to examine whether the two treatments led to differences in fourteen brain areas including nuclei of the somatosensory, vestibular and visual system. An ANOVA revealed an overall effect of treatment, indicating that the magnetic field change was perceived by the birds. While the differences were too small to be significant in most areas, a significant enhancement of activation by the rotating stimulus was found in a hippocampal subdivision. Part of the hyperpallium showed a strong, nearly significant, increase. Our results are compatible with previous studies demonstrating an involvement of at least three different sensory systems in earth magnetic field perception and suggest that these systems, probably less elaborated, may also be found in nonmigrating birds.

Using avian radar to examine relationships among avian activity, bird strikes, and meteorological factors

USGS Publications Warehouse

Coates, Peter S.; Casazza, Michael L.; Halstead, Brian J.; Fleskes, Joseph P.; Laughlin, James A.

2011-01-01

Radar systems designed to detect avian activity at airfields are useful in understanding factors that influence the risk of bird and aircraft collisions (bird strikes). We used an avian radar system to measure avian activity at Beale Air Force Base, California, USA, during 2008 and 2009. We conducted a 2-part analysis to examine relationships among avian activity, bird strikes, and meteorological and time-dependent factors. We found that avian activity around the airfield was greater at times when bird strikes occurred than on average using a permutation resampling technique. Second, we developed generalized linear mixed models of an avian activity index (AAI). Variation in AAI was first explained by seasons that were based on average migration dates of birds at the study area. We then modeled AAI by those seasons to further explain variation by meteorological factors and daily light levels within a 24-hour period. In general, avian activity increased with decreased temperature, wind, visibility, precipitation, and increased humidity and cloud cover. These effects differed by season. For example, during the spring bird migration period, most avian activity occurred before sunrise at twilight hours on clear days with low winds, whereas during fall migration, substantial activity occurred after sunrise, and birds generally were more active at lower temperatures. We report parameter estimates (i.e., constants and coefficients) averaged across models and a relatively simple calculation for safety officers and wildlife managers to predict AAI and the relative risk of bird strike based on time, date, and meteorological values. We validated model predictability and assessed model fit. These analyses will be useful for general inference of avian activity and risk assessment efforts. Further investigation and ongoing data collection will refine these inference models and improve our understanding of factors that influence avian activity, which is necessary to inform management decisions aimed at reducing risk of bird strikes.

Interactions between the visual and the magnetoreception system: different effects of bichromatic light regimes on the directional behavior of migratory birds.

PubMed

Wiltschko, Roswitha; Dehe, Lars; Gehring, Dennis; Thalau, Peter; Wiltschko, Wolfgang

2013-01-01

When magnetic compass orientation of migratory robins was tested, the birds proved well oriented under low intensity monochromatic light of shorter wavelengths up to 565 nm green; from 583 nm yellow onward, they were disoriented. In the present study, we tested robins under bichromatic lights composed (1) of 424 nm blue and 565 nm green and (2) of 565 nm green and 583 nm yellow at two intensities. Under dim blue-green light with a total quantal flux of ca. 8 × 10(15)quanta/sm(2), the birds were well oriented in their migratory direction by their inclination compass; under blue-green light of twice this intensity, their orientation became axial. In both cases, the magnetic directional information was mediated by the radical pair processes in the eye. When green and yellow light were combined, however, the nature of the behavior changed. Under green-yellow light of the higher intensity, the birds showed a 'fixed direction' response that was polar, no longer controlled by the normal inclination compass; under dim green-yellow light, the response became axial. Under these two light conditions, the respective directional information was mediated by the magnetite-based receptors in the skin of the upper beak. Apparently, yellow light leads to a change from one magnetoreception system to the other. How this change is effected is still unknown; it appears to reflect complex interactions between the visual and the two magnetoreception systems. Copyright © 2012 Elsevier Ltd. All rights reserved.

Ten years of International Migratory Bird Day

Treesearch

Jennifer Wheeler; Susan Bonfield

2005-01-01

Public awareness and concern are crucial components of migratory bird conservation. Citizens who are enthusiastic about birds, informed about threats, and empowered to become involved in addressing those threats can make a tremendous contribution to maintaining healthy bird populations. One of the most successful vehicles for public education on migratory birds is...

Bird feathers as potential sources of pathogenic microorganisms: a new look at old diseases.

PubMed

Miskiewicz, Andrzej; Kowalczyk, Paweł; Oraibi, Sanaa Mahdi; Cybulska, Krystyna; Misiewicz, Anna

2018-02-19

This article describes methods of treatment for avian zoonoses, modern antibiotic therapy and drug resistance of selected pathogens, which pose a threat to the population's health. A tabular form has been used to present the current data from the European Union from 2011 to 2017 regarding human morbidity and mortality and the costs incurred by national health systems for the treatment of zoonoses occurring in humans and animals. Moreover, the paper includes descriptions of selected diseases, which indirectly affect birds. Scientists can obtain information regarding the occurrence of particular diseases, their aetiology, epidemiology, incubation period and symptoms caused by dangerous microorganisms and parasites. This information should be of particular interest for people who have frequent contact with birds, such as ornithologists, as well as veterinarians, farm staff, owners of accompanying animals and zoological workers. This paper presents a review used for identification and genetic characterization of bacterial strains isolated from a variety of environmental sources, e.g., bird feathers along with their practical application. We describe the bacterial, viral and fungal serotypes present on avian feathers after the slaughter process. This review also enables us to effectively identify several of the early stages of infectious diseases from heterogeneous avian research material.

Developing an automated risk management tool to minimize bird and bat mortality at wind facilities.

PubMed

Robinson Willmott, Julia; Forcey, Greg M; Hooton, Lauren A

2015-11-01

A scarcity of baseline data is a significant barrier to understanding and mitigating potential impacts of offshore development on birds and bats. Difficult and sometimes unpredictable conditions coupled with high expense make gathering such data a challenge. The Acoustic and Thermographic Offshore Monitoring (ATOM) system combines thermal imaging with acoustic and ultrasound sensors to continuously monitor bird and bat abundance, flight height, direction, and speed. ATOM's development and potential capabilities are discussed, and illustrated using onshore and offshore test data obtained over 16 months in the eastern USA. Offshore deployment demonstrated birds tending to fly into winds and activity declining sharply in winds >10 km h(-1). Passerines showed distinct seasonal changes in flight bearing and flew higher than non-passerines. ATOM data could be used to automatically shut down wind turbines to minimize collision mortality while simultaneously providing information for modeling activity in relation to weather and season.

Sleep, Off-Line Processing, and Vocal Learning

ERIC Educational Resources Information Center

Margoliash, Daniel; Schmidt, Marc F.

2010-01-01

The study of song learning and the neural song system has provided an important comparative model system for the study of speech and language acquisition. We describe some recent advances in the bird song system, focusing on the role of off-line processing including sleep in processing sensory information and in guiding developmental song…

Referential calls coordinate multi-species mobbing in a forest bird community.

PubMed

Suzuki, Toshitaka N

2016-01-01

Japanese great tits ( Parus minor ) use a sophisticated system of anti-predator communication when defending their offspring: they produce different mobbing calls for different nest predators (snake versus non-snake predators) and thereby convey this information to conspecifics (i.e. functionally referential call system). The present playback experiments revealed that these calls also serve to coordinate multi-species mobbing at nests; snake-specific mobbing calls attracted heterospecific individuals close to the sound source and elicited snake-searching behaviour, whereas non-snake mobbing calls attracted these birds at a distance. This study demonstrates for the first time that referential mobbing calls trigger different formations of multi-species mobbing parties.

A critical look at national monitoring programs for birds and other wildlife species

USGS Publications Warehouse

Sauer, J.R.; O'Shea, T.J.; Bogon, M.A.

2003-01-01

Concerns?about declines in numerous taxa have created agreat deal of interest in survey development. Because birds have traditionally been monitored by a variety of methods, bird surveys form natural models for development of surveys for other taxa. Here I suggest that most bird surveys are not appropriate models for survey design. Most lack important design components associated with estimation of population parameters at sample sites or with sampling over space, leading to estimates that may be biased, I discuss the limitations of national bird monitoring programs designed to monitor population size. Although these surveys are often analyzed, careful consideration must be given to factors that may bias estimates but that cannot be evaluated within the survey. Bird surveys with appropriate designs have generally been developed as part of management programs that have specific information needs. Experiences gained from bird surveys provide important information for development of surveys for other taxa, and statistical developments in estimation of population sizes from counts provide new approaches to overcoming the limitations evident in many bird surveys. Design of surveys is a collaborative effort, requiring input from biologists, statisticians, and the managers who will use the information from the surveys.

78 FR 68086 - Proposed Information Collection; Federal Fish and Wildlife Permit Applications and Reports...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-13

...--Migratory Birds and Eagles AGENCY: Fish and Wildlife Service, Interior. ACTION: Notice; request for comments...) or 703- 358-2482 (telephone). SUPPLEMENTARY INFORMATION: I. Abstract Our Regional Migratory Bird... laws and international treaties, including: (1) Migratory Bird Treaty Act (16 U.S.C. 703 et seq.). (2...

Bird Communities of Southern Forests

Treesearch

William C. Hunter; James G. Dickson; David N. Pashley; Paul B. Hamel

2002-01-01

Birds constitute a high-profile group of species that attract a great deal of attention as watchable wildlife. Also, birds are important as indicators of habitat conditions and environmental health. Compared to other groups of animals and plants, birds are relatively conspicuous and can be easily monitored. Available information on bird ecology is substantial, but...

DEVELOPMENT OF A BIRD INTEGRITY INDEX: USING BIRD ASSEMBLAGES AS INDICATORS OF RIPARIAN CONDITION

EPA Science Inventory

We describe the development of a Bird Integrity Index (Bll) that uses bird assemblage information to assess human impacts on 13 stream reaches in the Willamette Valley, Oregon. We used bird survey field data to test 62 candidate metrics that were expected to respond positively or...

Magnetic Orientation in Birds and Other Animals

NASA Astrophysics Data System (ADS)

Wiltschko, Wolfgang

The use of the geomagnetic field for compass orientation is widespread among animals, with two types of magnetic compass mechanisms described: an shape inclination compass in birds, turtles and salamanders and a shape polarity compass in arthropods, fishes and mammals. Additionally, some vertebrates appear to derive positional information from the total intensity and/or inclination of the geomagnetic field. For magnetoreception by animals, two models are currently discussed, the shape Radical Pair model assuming light-dependent processes by specialized photopigments, and the shape Magnetite hypothesis proposing magnetoreception by crystals of magnetite, Fe304. Behavioral experiments with migratory birds, testing them under monochromatic lights and subjecting them to a brief, strong pulse that could reverse the magnetization of magnetite particles, produced evidence for both mechanisms. However, monochromatic lights affect old, experienced and young birds alike, whereas the pulse affects only experienced birds, leaving young, inexperienced birds unaffected. These observations suggest that a radical pair mechanism provides birds with directional information for their innate magnetic compass and a magnetite-based mechanism possibly mediates information about total intensity for indicating position.

A preliminary spatial assessment of risk: Marine birds and chronic oil pollution on Canada's Pacific coast.

PubMed

Fox, C H; O'Hara, P D; Bertazzon, S; Morgan, K; Underwood, F E; Paquet, P C

2016-12-15

Chronic oil pollution poses substantial risks to marine birds and other marine wildlife worldwide. On Canada's Pacific coast, the negative ecological consequences to marine birds and marine ecosystems in general remain poorly understood. Using information relating to oil spill probability of occurrence, areas of overall importance to marine birds, and the at-sea distribution and density of 12 marine bird species and seven bird groups, including multiple Species at Risk, we undertook a spatial assessment of risk. Our results identify two main areas important to marine birds potentially at higher risk of exposure to oil. For individual bird species or species groups, those predicted to have elevated bird densities near the mainland and the northeast coast of Vancouver Island were identified as being at higher potential risk of exposure. Our results, however, should be considered preliminary. As with other anthropogenic stressors, in order to better understand and subsequently mitigate the consequences of chronic oil pollution on marine birds, improved information relating to marine birds and the occurrence of oil spills on Canada's Pacific coast is needed. Copyright © 2016 Elsevier B.V. All rights reserved.

Avian influenza virus and free-ranging wild birds

USGS Publications Warehouse

Dierauf, Leslie A.; Karesh, W.B.; Ip, Hon S.; Gilardi, K.V.; Fischer, John R.

2006-01-01

Recent media and news reports and other information implicate wild birds in the spread of highly pathogenic avian influenza in Asia and Eastern Europe. Although there is little information concerning highly pathogenic avian influenza viruses in wild birds, scientists have amassed a large amount of data on low-pathogenicity avian influenza viruses during decades of research with wild birds. This knowledge can provide sound guidance to veterinarians, public health professionals, the general public, government agencies, and other entities with concerns about avian influenza.

Birds and burns of the interior West: descriptions, habitats, and management in western forests.

Treesearch

Victoria Saab; William Block; Robin Russell; John Lehmkuhl; Lisa Bate; Rachel White

2007-01-01

This publication provides information about prescribed fire effects on habitats and populations of birds of the interior West and a synthesis of existing information on bird responses to fire across North America. Our literature synthesis indicated that aerial, ground, and bark insectivores favored recently burned habitats, whereas foliage gleaners preferred unburned...

Birds of the major mainland rivers of southeast Alaska.

Treesearch

James A. Johnson; Brad A. Andres; John A. Bissonette

2008-01-01

This publication describes the bird communities of major mainland rivers of southeast Alaska and is based on a review of all known relevant studies as well as recent fieldwork. We synthesized information on the composition, structure, and habitat relationships of bird communities at 11 major mainland rivers. Information on current management concerns and research needs...

Monitoring goals and programs of the U.S. Fish and Wildlife Service

Treesearch

John R. Sauer

1993-01-01

The United States Fish and Wildlife Service coordinates several surveys that collect information on the population status of migratory birds in North America. The North American Breeding Bird Survey is the primary source of population information on nongame birds during the breeding season, and waterfowl surveys are conducted during breeding and wintering seasons. The...

Tissue radionuclide concentrations in water birds and upland birds on the Hanford Site (USA) from 1971-2009.

PubMed

Delistraty, Damon; Van Verst, Scott

2011-08-01

Historical operations at the Hanford Site (Washington State, USA) have released a wide array of non-radionuclide and radionuclide contaminants into the environment. As a result, there is a need to characterize contaminant effects on site biota. Within this framework, the main purpose of our study was to evaluate radionuclide concentrations in bird tissue, obtained from the Hanford Environmental Information System (HEIS). The database was sorted by avian group (water bird vs. upland bird), radionuclide (over 20 analytes), tissue (muscle, bone, liver), location (onsite vs. offsite), and time period (1971-1990 vs. 1991-2009). Onsite median concentrations in water birds were significantly higher (Bonferroni P < 0.05) than those in onsite upland birds for Cs-137 in muscle (1971-1990) and Sr-90 in bone (1991-2009), perhaps due to behavioral, habitat, or trophic species differences. Onsite median concentrations in water birds were higher (borderline significance with Bonferroni P = 0.05) than those in offsite birds for Cs-137 in muscle (1971-1990). Onsite median concentrations in the earlier time period were significantly higher (Bonferroni P < 0.05) than those in the later time period for Co-60, Cs-137, Eu-152, and Sr-90 in water bird muscle and for Cs-137 in upland bird muscle tissue. Median concentrations of Sr-90 in bone were significantly higher (Bonferroni P < 0.05) than those in muscle for both avian groups and both locations. Over the time period, 1971-2009, onsite median internal dose was estimated for each radionuclide in water bird and upland bird tissues. However, a meaningful dose comparison between bird groups was not possible, due to a dissimilar radionuclide inventory, mismatch of time periods for input radionuclides, and lack of an external dose estimate. Despite these limitations, our results contribute toward ongoing efforts to characterize ecological risk at the Hanford Site. Copyright © 2011 Elsevier Ltd. All rights reserved.

Birds from the Azores: An updated list with some comments on species distribution

PubMed Central

Rodrigues, Pedro R; Bried, Joël; Mendonça, Enésima P; Gabriel, Rosalina; Borges, Paulo Alexandre Vieira

2015-01-01

Abstract Background An updated checklist of the Birds of the Azores is presented based on information compiled from Rodrigues et al. (2010) and from the websites, Azores Bird Club. (2014), Aves dos Açores (2014) Azores Bird Sightings (2014) and Vittery (2014), since 2010. New information The checklist has a total of 414 species, including 38 new species. Almost half of the species and subspecies that occur in the Azores have a Palearctic origin, the remaining ones being essentialy Nearctic and Holarctic species. São Miguel is the island with the highest number of bird species, followed by Terceira, Corvo and Flores islands. PMID:26696765

78 FR 58204 - Migratory Bird Hunting; Late Seasons and Bag and Possession Limits for Certain Migratory Game Birds

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-23

... Possession Limits for Certain Migratory Game Birds AGENCY: Fish and Wildlife Service, Interior. ACTION: Final..., and other regulations for hunting migratory game birds under Sec. Sec. 20.101 through 20.107, 20.109... participants reviewed information on the current status of migratory shore and upland game birds and developed...

All about Owls: Studying Owls, State Birds, and Endangered Species.

ERIC Educational Resources Information Center

Rivard, Leonard P.

1991-01-01

Activities are included that acquaint students with the parts of birds and the structure of feathers; that identify the prey of owls by opening owl pellets; working with information about threatened and endangered species of birds; and follow-up activities for bird study. A list of state and provincial birds of the United States and Canada and…

American Bird conservancy's approach to the U.S. Important Bird Area Program - identifying the top 500 global sites

Treesearch

Robert M. Chipley

2005-01-01

The idea for the Important Bird Area Program originated in a series of studies in the early 1980s conducted by BirdLife International. Recognizing that these studies could become a powerful tool for conservation, BirdLife International began an effort to identify and gather data regarding the most important areas for birds in Europe and to make this information...

Modeling the Distribution of Migratory Bird Stopovers to Inform Landscape-Scale Siting of Wind Development

PubMed Central

Pocewicz, Amy; Estes-Zumpf, Wendy A.; Andersen, Mark D.; Copeland, Holly E.; Keinath, Douglas A.; Griscom, Hannah R.

2013-01-01

Conservation of migratory birds requires understanding the distribution of and potential threats to their migratory habitats. However, although migratory birds are protected under international treaties, few maps have been available to represent migration at a landscape scale useful to target conservation efforts or inform the siting of wind energy developments that may affect migratory birds. To fill this gap, we developed models that predict where four groups of birds concentrate or stopover during their migration through the state of Wyoming, USA: raptors, wetland, riparian and sparse grassland birds. The models were based on existing literature and expert knowledge concerning bird migration behavior and ecology and validated using expert ratings and known occurrences. There was significant agreement between migratory occurrence data and migration models for all groups except raptors, and all models ranked well with experts. We measured the overlap between the migration concentration models and a predictive model of wind energy development to assess the potential exposure of migratory birds to wind development and illustrate the utility of migratory concentration models for landscape-scale planning. Wind development potential is high across 15% of Wyoming, and 73% of this high potential area intersects important migration concentration areas. From 5.2% to 18.8% of each group’s important migration areas was represented within this high wind potential area, with the highest exposures for sparse grassland birds and the lowest for riparian birds. Our approach could be replicated elsewhere to fill critical data gaps and better inform conservation priorities and landscape-scale planning for migratory birds. PMID:24098379

A citywide breeding bird survey for Washington, DC

USGS Publications Warehouse

Hadidian, J.; Sauer, J.R.; Swarth, C.; Handly, P.; Droege, S.; Williams, C.; Huff, J.; Didden, G.

1997-01-01

`DC Birdscape' was initiated in 1993 to systematically count the birds occurring throughout Washington D.C. during the breeding season. It involved a coordinated planning effort and partnership between the Audubon Naturalist Society, the National Park Service, and the National Biological Survey, and engaged the participation of more than 100 volunteers. A method for rapidly assessing the status of bird populations over a large area was developed and incorporated into a Geographic Information System to allow a multidimensional analysis of species presence and abundance across a variety of urban land use areas. A total of 91 species were observed, with an estimated total number of 115, making Washington D.C. almost as `bird rich' as nearby suburban counties. Data from the study clearly indicate that avian species are not randomly distributed throughout the Washington D.C. metropolitan area, and show affinity, at least in part, to some of the most broadly recognized land use patterns that are commonly used to zone and classify urban areas under development schemes. This study represents a prototype that will allow efficient and economical monitoring of urban bird populations.

Loss of sagebrush ecosystems and declining bird populations in the Intermountain West: Priority research issues and information needs

USGS Publications Warehouse

,

2002-01-01

Sagebrush lands in the Intermountain West are declining rapidly in quality and extent. Consequently, populations of many bird species dependent on these ecosystems also are declining. The greater sage-grouse has been petitioned for listing as a threatened and endangered species, and other species of sagebrush-obligate birds have special conservation status in most states. We identified the primary issues and information needs during a multi-agency workshop, conducted in response to concerns by management agencies related to declining bird population trends in sagebrush habitats. Priority needs were to (1) obtain a better understanding of bird response to habitat and landscape features, (2) develop monitoring designs to sample habitats and bird populations, (3) determine the effects of land use on sagebrush habitats and dependent bird species, and (4) identify linkages between breeding and wintering ranges. This agenda will identify causes and mechanisms of population declines in birds dependent on sagebrush ecosystems and will lead to better management of the ecosystems upon which they depend.

Conserving the grassland Important Bird Areas (IBAs) of southern South America: Argentina, Uruguay, Paraguay, and Brazil

Treesearch

Adrian S. Di Giacomo; Santiago Krapovickas

2005-01-01

In the southern part of South America, knowledge about bird species distribution is still not used as a tool for land use planning and conservation priority-setting. BirdLife International’s Important Bird Areas (IBA) Program is an appropriate vehicle for analyzing existing information about birds, and to generate new data where necessary. IBA inventories...

Effects of stocking density, flock size and management on the welfare of laying hens in single-tier aviaries.

PubMed

Nicol, C J; Brown, S N; Glen, E; Pope, S J; Short, F J; Warriss, P D; Zimmerman, P H; Wilkins, L J

2006-04-01

Management practices, stocking rate and flock size may affect laying hen welfare but there have been few replicated studies in commercial non-cage systems that investigate this. This study used a broad range of physical and physiological indicators to assess the welfare of hens in 36 commercial flocks. Six laying period treatments were examined with each treatment replicated 6 times. It was not possible to randomly allocate treatments to houses, so treatment and house were largely confounded. Three stocking rates were compared: 7 birds/m(2) (n = 2450), 9 birds/m(2) (n = 3150) and 12 birds/m(2) in either small (n = 2450) or large (n = 4200) flocks. In addition, at 12 birds/m(2), in both small and large flocks, birds were subjected to either standard (SM) or modified (MM) management. MM flocks had nipple drinkers and no nest-box lights. Bone strength, fracture incidence, heterophil:lymphocyte (H:L) ratio, live weight, organ weights, serum creatine, serum osmolality, muscle pH and faecal corticosterone were measured on samples of birds at the end of the rearing period and at the end of lay. During the laying period, mortality, production and integument condition were recorded at regular intervals. Birds housed at 9 birds/m(2) had higher mortality than birds housed at 12 birds/m(2) by the end of lay, but not higher than birds housed at 7 birds/m(2). Birds housed at 7 and 9 birds/m(2) had lower percent liver weight, and worse plumage condition than most of the 12 bird/m(2) treatments. Modified management tended to improve plumage condition. There were no clear effects of flock size on the welfare indicators recorded. At the end of the rearing period fracture incidence was almost negligible and H:L ratio was within a normal range. By the end of lay fracture incidence was 60% and H:L ratio was high, with no treatment effect for either measure. This, together with information on faecal corticosterone, feather loss and mortality, suggests that the welfare of birds in all treatments was relatively poor by the end of lay.

Leaky doors: Private captivity as a prominent source of bird introductions in Australia

PubMed Central

2017-01-01

The international pet trade is a major source of emerging invasive vertebrate species. We used online resources as a novel source of information for accidental bird escapes, and we investigated the factors that influence the frequency and distribution of bird escapes at a continental scale. We collected information on over 5,000 pet birds reported to be missing on animal websites during the last 15 years in Australia. We investigated whether variables linked to pet ownership successfully predicted bird escapes, and we assessed the potential distribution of these escapes. Most of the reported birds were parrots (> 90%), thus, we analysed factors associated with the frequency of parrot escapes. We found that bird escapes in Australia are much more frequent than previously acknowledged. Bird escapes were reported more frequently within, or around, large Australian capital cities. Socio-economic factors, such as the average personal income level of the community, and the level of human modification to the environment were the best predictors of bird escapes. Cheaper parrot species, Australian natives, and parrot species regarded as peaceful or playful were the most frequently reported escapees. Accidental introductions have been overlooked as an important source of animal incursions. Information on bird escapes is available online in many higher income countries and, in Australia, this is particularly apparent for parrot species. We believe that online resources may provide useful tools for passive surveillance for non-native pet species. Online surveillance will be particularly relevant for species that are highly reported, such as parrots, and species that are either valuable or highly commensal. PMID:28235000

Alternative ways of representing Zapotec and Cuicatec folk classification of birds: a multidimensional model and its implications for culturally-informed conservation in Oaxaca, México.

PubMed

Alcántara-Salinas, Graciela; Ellen, Roy F; Valiñas-Coalla, Leopoldo; Caballero, Javier; Argueta-Villamar, Arturo

2013-12-09

We report on a comparative ethno-ornithological study of Zapotec and Cuicatec communities in Northern Oaxaca, Mexico that provided a challenge to some existing descriptions of folk classification. Our default model was the taxonomic system of ranks developed by Brent Berlin. Fieldwork was conducted in the Zapotec village of San Miguel Tiltepec and in the Cuicatec village of San Juan Teponaxtla, using a combination of ethnographic interviews and pile-sorting tests. Post-fieldwork, Principal Component Analysis using NTSYSpc V. 2.11f was applied to obtain pattern variation for the answers from different participants. Using language and pile-sorting data analysed through Principal Component Analysis, we show how both Zapotec and Cuicatec subjects place a particular emphasis on an intermediate level of classification.These categories group birds with non-birds using ecological and behavioral criteria, and violate a strict distinction between symbolic and mundane (or ‘natural’), and between ‘general-purpose’ and ‘single-purpose’ schemes. We suggest that shared classificatory knowledge embodying everyday schemes for apprehending the world of birds might be better reflected in a multidimensional model that would also provide a more realistic basis for developing culturally-informed conservation strategies.

Alternative ways of representing Zapotec and Cuicatec folk classification of birds: a multidimensional model and its implications for culturally-informed conservation in Oaxaca, México

PubMed Central

2013-01-01

Background We report on a comparative ethno-ornithological study of Zapotec and Cuicatec communities in Northern Oaxaca, Mexico that provided a challenge to some existing descriptions of folk classification. Our default model was the taxonomic system of ranks developed by Brent Berlin. Methods Fieldwork was conducted in the Zapotec village of San Miguel Tiltepec and in the Cuicatec village of San Juan Teponaxtla, using a combination of ethnographic interviews and pile-sorting tests. Post-fieldwork, Principal Component Analysis using NTSYSpc V. 2.11f was applied to obtain pattern variation for the answers from different participants. Results and conclusion Using language and pile-sorting data analysed through Principal Component Analysis, we show how both Zapotec and Cuicatec subjects place a particular emphasis on an intermediate level of classification. These categories group birds with non-birds using ecological and behavioral criteria, and violate a strict distinction between symbolic and mundane (or ‘natural’), and between ‘general-purpose’ and ‘single-purpose’ schemes. We suggest that shared classificatory knowledge embodying everyday schemes for apprehending the world of birds might be better reflected in a multidimensional model that would also provide a more realistic basis for developing culturally-informed conservation strategies. PMID:24321280

Closed-loop bird-computer interactions: a new method to study the role of bird calls.

PubMed

Lerch, Alexandre; Roy, Pierre; Pachet, François; Nagle, Laurent

2011-03-01

In the field of songbird research, many studies have shown the role of male songs in territorial defense and courtship. Calling, another important acoustic communication signal, has received much less attention, however, because calls are assumed to contain less information about the emitter than songs do. Birdcall repertoire is diverse, and the role of calls has been found to be significant in the area of social interaction, for example, in pair, family, and group cohesion. However, standard methods for studying calls do not allow precise and systematic study of their role in communication. We propose herein a new method to study bird vocal interaction. A closed-loop computer system interacts with canaries, Serinus canaria, by (1) automatically classifying two basic types of canary vocalization, single versus repeated calls, as they are produced by the subject, and (2) responding with a preprogrammed call type recorded from another bird. This computerized animal-machine interaction requires no human interference. We show first that the birds do engage in sustained interactions with the system, by studying the rate of single and repeated calls for various programmed protocols. We then show that female canaries differentially use single and repeated calls. First, they produce significantly more single than repeated calls, and second, the rate of single calls is associated with the context in which they interact, whereas repeated calls are context independent. This experiment is the first illustration of how closed-loop bird-computer interaction can be used productively to study social relationships. © Springer-Verlag 2010

Avian influenza in Latin America: A systematic review of serological and molecular studies from 2000-2015

PubMed Central

Diaz, Andres

2017-01-01

Avian influenza or bird flu is a highly contagious acute viral disease that can occur in epidemics and cross-border forms in poultry and wild birds. The characteristics of avian influenza viruses (AIVs) allow the emergence of new viral variants, some with zoonotic and pandemic potential. AIVs have been identified in Latin America; however, there is a lack of understanding of these viruses at the regional level. We performed a systematic literature review on serological or molecular evidence of AIVs circulation in Latin America. Methods were designed based on the PRISMA and STROME guidelines. Only peer-reviewed studies published between 2000 to 2015 and data was analysed based on country, viral subtype, avian species, and phylogenetic origins. From 271 studies initially found only twenty-six met our inclusion criteria. Evidence of AIVs infection was found in most Latin American countries, with Mexico as the country with the largest number of conducted studies and reported cases during the period analysed, followed by Chile and Argentina. Most of the AIVs were early reported through surveillance systems and at least 14 different subtypes of influenza viruses were reported in birds, and the presence of both low (92.9%) and high (7.1%) pathogenic AIVs was shown in Latin America. Of the reported AIVs in Latin America, 43.7% belong to migratory birds, 28.1% to local wild birds, and 28.1% to poultry. The migratory bird population mainly comprises families belonging to the orders Anseriformes and Charadriformes. We highlight the importance of epidemiological surveillance systems and the possible role of different migratory birds in the transmission of AIVs within the Americas. Our findings demonstrate the limited information on AIVs in Latin America and highlight the need of more studies on AIVs at the regional level, particularly those focused on identifying the endemic subtypes in regional wild birds. PMID:28632771

On a Model of a Nonlinear Feedback System for River Flow Prediction

NASA Astrophysics Data System (ADS)

Ozaki, T.

1980-02-01

A nonlinear system with feedback is proposed as a dynamic model for the hydrological system, whose input is the rainfall and whose output is the discharge of river flow. Parameters and orders of the model are estimated using Akaike's information criterion. Its application to the prediction of daily discharges of Kanna River and Bird Creek is discussed.

Informal inter-island poultry movement in Indonesia: does it pose a risk to HPAI H5N1 transmission?

PubMed

Millar, Joanne; Abdurrahman, Muktasam; Toribio, Jenny-Ann; Ambarawati, Annie; Yusuf, Ria Puspa; Suadnya, Wayan

2015-10-01

Informal movement of domesticated poultry and wild birds is considered a major threat in terms of highly pathogenic avian influenza (HPAI) H5N1 transmission between birds and from birds to humans. However, the risk of transmission from informal illegal poultry movement has received little attention in Indonesia where human fatalities are the highest in the world. This research investigated the illegal movement of adult poultry between the islands of Java, Bali and Lombok to determine the potential risk of HPAI H5N1 transmission. The aim was to determine known origins and destinations of poultry, estimated quantity and types of birds, people involved and the drivers of illegal movement. Transportation and handling methods and views on how to minimise illegal movement were also investigated. In-depth interviews were carried out with 71 key informants in Bali and Lombok in 2009. East Java was the main origin of poultry entering Bali, followed by Central Java and Lombok. Interviewees estimated that over 10,000 village chickens, 500 ducks and 50 fighting cocks were brought into Bali per month from all origins. However, there were significant discrepancies with quarantine records indicating that the majority of birds imported illegally are not detected. We conclude that although informal illegal movement of poultry in Indonesia poses a potentially high risk for potential HPAI H5N1 transmission if birds are infected, much can be done to increase surveillance, encourage reporting of sick birds, educate traders about the risks and provide effective quarantine within an appropriate cultural framework.

77 FR 60455 - Information Collection Request Sent to the Office of Management and Budget (OMB) for Approval...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-03

..., possession, import, export, transport, sale, purchase, or bartering of migratory birds or their parts except... Airport Systems and have received Federal grant-in-aid assistance or be a military airfield under the...

Visual perception and social foraging in birds.

PubMed

Fernández-Juricic, Esteban; Erichsen, Jonathan T; Kacelnik, Alex

2004-01-01

Birds gather information about their environment mainly through vision by scanning their surroundings. Many prevalent models of social foraging assume that foraging and scanning are mutually exclusive. Although this assumption is valid for birds with narrow visual fields, these models have also been applied to species with wide fields. In fact, available models do not make precise predictions for birds with large visual fields, in which the head-up, head-down dichotomy is not accurate and, moreover, do not consider the effects of detection distance and limited attention. Studies of how different types of visual information are acquired as a function of body posture and of how information flows within flocks offer new insights into the costs and benefits of living in groups.

Grassland bird densities in seral stages of mixed-grass prairie

Treesearch

Shawn C. Fritcher; Mark A. Rumble; Lester D. Flake

2004-01-01

Birds associated with prairie ecosystems are declining and the ecological condition (seral stage) of remaining grassland communities may be a factor. Livestock grazing intensity influences the seral stage of grassland communities and resource managers lack information to assess how grassland birds are affected by these changes. We estimated bird density, species...

DEVELOPMENT OF A BIRD INTEGRITY INDEX: MEASURING AVIAN RESPONSE TO DISTURBANCE IN THE BLUE MOUNTAINS OF OREGON, USA

EPA Science Inventory

The Bird Integrity Index (BII) presented here uses bird assemblage information to assess human impacts to 28 stream reaches in the Blue Mountains of eastern Oregon. Eighty-one candidate metrics were extracted from bird survey data for testing. The metrics represented aspects of ...

Soundscapes to Landscapes (S2L): Monitoring Animal Biodiversity from Space Using Citizen Scientists

NASA Astrophysics Data System (ADS)

Clark, M. L.; Salas, L.; Goetz, S. J.

2017-12-01

Soundscapes to Landscapes (S2L) is a citizen science project with the broad goal of advancing scientific understanding of biodiversity and conservation using a combination of new and existing spaceborne sensors. The prototype phase of this project is focused on modeling bird diversity at the watershed scale in Sonoma County, California. The main objectives are to: 1) involve citizen scientists in the collection of in situ field information on bird diversity; 2) assess the accuracy and precision of bioacoustics for the detection and monitoring of individual species and richness; 3) test the predictive strength of spaceborne imaging spectroscopy, lidar, synthetic aperture radar (SAR) sensors for spatial modeling of species occupancy and overall species richness; and 4) use occupancy/richness maps to better understand factors related to conserving animal diversity. In the prototype field campaign, citizen scientists (birders, undergraduate students) deployed portable sound recorders for 3-4 days in various habitats in a local watershed. Over 50,200 minutes (866 hours) of "soundscape" recordings were collected over 3 months. Through a series of "bird blitzes", citizen scientists used the ARBIMON II web-based system to listen to spectrograms (time vs. frequency) of 1-minute recordings, tag bird calls for identifiable species, validate presence/absence of bird species, draw training-set boxes around well-formed calls, and help evaluate Random Forests machine-learning model performance. Bird-call models were applied to all soundscapes to identify presence/absence of 10 indicator species. Another phase of this project involves species distribution modeling in conjunction with C- and L-band SAR imagery, simulated Hyperspectral Infrared Imager (HyspIRI) and Global Ecosystem Dynamics Investigation (GEDI) large-footprint lidar data. Metrics derived from these data provide unique, wall-to-wall information on vegetation chemistry (HyspIRI) and three-dimensional structure (GEDI, SAR) that are linked with soundscape-derived bird data to model species occupancy and overall richness at the landscape scale.

What Drives Bird Vision? Bill Control and Predator Detection Overshadow Flight.

PubMed

Martin, Graham R

2017-01-01

Although flight is regarded as a key behavior of birds this review argues that the perceptual demands for its control are met within constraints set by the perceptual demands of two other key tasks: the control of bill (or feet) position, and the detection of food items/predators. Control of bill position, or of the feet when used in foraging, and timing of their arrival at a target, are based upon information derived from the optic flow-field in the binocular region that encompasses the bill. Flow-fields use information extracted from close to the bird using vision of relatively low spatial resolution. The detection of food items and predators is based upon information detected at a greater distance and depends upon regions in the retina with relatively high spatial resolution. The tasks of detecting predators and of placing the bill (or feet) accurately, make contradictory demands upon vision and these have resulted in trade-offs in the form of visual fields and in the topography of retinal regions in which spatial resolution is enhanced, indicated by foveas, areas, and high ganglion cell densities. The informational function of binocular vision in birds does not lie in binocularity per se (i.e., two eyes receiving slightly different information simultaneously about the same objects) but in the contralateral projection of the visual field of each eye. This ensures that each eye receives information from a symmetrically expanding optic flow-field centered close to the direction of the bill, and from this the crucial information of direction of travel and time-to-contact can be extracted, almost instantaneously. Interspecific comparisons of visual fields between closely related species have shown that small differences in foraging techniques can give rise to different perceptual challenges and these have resulted in differences in visual fields even within the same genus. This suggests that vision is subject to continuing and relatively rapid natural selection based upon individual differences in the structure of the optical system, retinal topography, and eye position in the skull. From a sensory ecology perspective a bird is best characterized as "a bill guided by an eye" and that control of flight is achieved within constraints on visual capacity dictated primarily by the demands of foraging and bill control.

What Drives Bird Vision? Bill Control and Predator Detection Overshadow Flight

PubMed Central

Martin, Graham R.

2017-01-01

Although flight is regarded as a key behavior of birds this review argues that the perceptual demands for its control are met within constraints set by the perceptual demands of two other key tasks: the control of bill (or feet) position, and the detection of food items/predators. Control of bill position, or of the feet when used in foraging, and timing of their arrival at a target, are based upon information derived from the optic flow-field in the binocular region that encompasses the bill. Flow-fields use information extracted from close to the bird using vision of relatively low spatial resolution. The detection of food items and predators is based upon information detected at a greater distance and depends upon regions in the retina with relatively high spatial resolution. The tasks of detecting predators and of placing the bill (or feet) accurately, make contradictory demands upon vision and these have resulted in trade-offs in the form of visual fields and in the topography of retinal regions in which spatial resolution is enhanced, indicated by foveas, areas, and high ganglion cell densities. The informational function of binocular vision in birds does not lie in binocularity per se (i.e., two eyes receiving slightly different information simultaneously about the same objects) but in the contralateral projection of the visual field of each eye. This ensures that each eye receives information from a symmetrically expanding optic flow-field centered close to the direction of the bill, and from this the crucial information of direction of travel and time-to-contact can be extracted, almost instantaneously. Interspecific comparisons of visual fields between closely related species have shown that small differences in foraging techniques can give rise to different perceptual challenges and these have resulted in differences in visual fields even within the same genus. This suggests that vision is subject to continuing and relatively rapid natural selection based upon individual differences in the structure of the optical system, retinal topography, and eye position in the skull. From a sensory ecology perspective a bird is best characterized as “a bill guided by an eye” and that control of flight is achieved within constraints on visual capacity dictated primarily by the demands of foraging and bill control. PMID:29163020

Spermiogenesis in birds

PubMed Central

Aire, Tom A

2014-01-01

Current knowledge on avian spermiogenesis, including strengths and weaknesses, has been reviewed. Information on avian spermiogenesis considerably lags behind that in mammals because of the paucity of reports in birds. Spermiogenesis in passerine birds has received even much less attention than in non-passerine birds. Mechanisms underlying morphogenesis of the acrosome and nucleus, and roles of microtubular assemblies are poorly understood. The proximal centriole found in non-passerine birds, but hitherto considered to be absent in passerine birds, has recently been described in spermatids and mature spermatozoa of 2 passeridan species, including the Masked weaver for which new and detailed spermiogenetic information is provided in this review. A great deal more studies on spermiogenesis, and spermatogenesis generally, in various avian species are required to considerably enhance knowledge of this phenomenon, contribute to comparative spermatology, provide a basis for appropriate applied studies, and contribute to understanding of phylogeny in this vast order of vertebrates. PMID:26413401

Population trends from the North American Breeding Bird Survey

USGS Publications Warehouse

Peterjohn, B.G.; Sauer, J.R.; Robbins, C.S.; Martin, Thomas E.; Finch, Deborah M.

1995-01-01

INTRODUCTION: Most Neotropical migrant birds are difficult to count accurately and are moderately common over large breeding distributions. Consequently, little historical information exists on their large-scale population changes, and most of this information is anecdotal. Surveys begun in this century such as Breeding Bird Censuses and Christmas Bird Counts have the potential to provide this information, but only the North American Breeding Bird Survey (BBS) achieves the extensive continental coverage necessary to document population changes for most Neotropical migrant birds. Conservationists and ecologists have begun to use BBS data to estimate population trends, but there is still widespread confusion over exactly what these data show regarding population changes. In this chapter, we review the current state of knowledge regarding population changes in Neotropical migrant birds and the methods used to analyze these changes. The primary emphasis is on the BBS (Robbins et al. 1986) because this survey provides the best available data for estimating trends of Neotropical migrants on a continental scale. To address questions about methods of analyzing survey data, we review and compare some alternative methods of analyzing BBS data. We also discuss the effectiveness of the BBS in sampling Neotropical migrant species, and review possibilities for use of alternative data sets to verify trends from the BBS.

Using Christmas Bird Count data in analysis of population change

USGS Publications Warehouse

Sauer, J.R.; Link, W.A.

2002-01-01

The scientific credibility of Christmas Bird Count (CBC) results depend on the development and implementation of appropriate methods of statistical analysis. The key to any successful analysis of CBC data is to begin with a careful review of how the limitations of the data are likely to influence the results of the analysis, then to choose methods of analysis that accommodate as much as possible the limitations of the survey. For our analyses of CBC data, we develop a flexible model for effort adjustment and use information from the data to guide the selection of the best model. We include geographic structuring to accommodate the regional variation in number of samples, use a model that allows for overdispersed poisson data appropriate for counts, and employ empirical Bayes procedures to accommodate differences in quality of information in regional summaries. This generalized linear model approach is very flexible, and can be applied to a variety of studies focused on factors influencing wintering bird populations. In particular, the model can be easily modified to contain covariates, allowing for assessment of associations between CBC counts and winter weather, disturbance, and a variety of other environmental factors. These new survey analysis methods have added value in that they provide insights into changes in survey design that can enhance the value of the information. The CBC has been extremely successful as a tool for increasing public interest in birding and bird conservation. Use of the information for bird conservation creates new demands on quality of information, and it is important to maintain a dialogue between users of the information, information needs for the analyses, and survey coordinators and participants. Our work as survey analysts emphasizes the value and limitations of existing data, and provides some indications of what features of the survey could be modified to make the survey a more reliable source of bird population data. Surveys only remain useful if they adapt to current needs, while still maintaining consistency with historical goals.

Detection of Interaural Time Differences in the Alligator

PubMed Central

Carr, Catherine E.; Soares, Daphne; Smolders, Jean; Simon, Jonathan Z.

2011-01-01

The auditory systems of birds and mammals use timing information from each ear to detect interaural time difference (ITD). To determine whether the Jeffress-type algorithms that underlie sensitivity to ITD in birds are an evolutionarily stable strategy, we recorded from the auditory nuclei of crocodilians, who are the sister group to the birds. In alligators, precisely timed spikes in the first-order nucleus magnocellularis (NM) encode the timing of sounds, and NM neurons project to neurons in the nucleus laminaris (NL) that detect interaural time differences. In vivo recordings from NL neurons show that the arrival time of phase-locked spikes differs between the ipsilateral and contralateral inputs. When this disparity is nullified by their best ITD, the neurons respond maximally. Thus NL neurons act as coincidence detectors. A biologically detailed model of NL with alligator parameters discriminated ITDs up to 1 kHz. The range of best ITDs represented in NL was much larger than in birds, however, and extended from 0 to 1000 μs contralateral, with a median ITD of 450 μs. Thus, crocodilians and birds employ similar algorithms for ITD detection, although crocodilians have larger heads. PMID:19553438

GPS tracking data of Lesser Black-backed Gulls and Herring Gulls breeding at the southern North Sea coast.

PubMed

Stienen, Eric W M; Desmet, Peter; Aelterman, Bart; Courtens, Wouter; Feys, Simon; Vanermen, Nicolas; Verstraete, Hilbran; de Walle, Marc Van; Deneudt, Klaas; Hernandez, Francisco; Houthoofdt, Robin; Vanhoorne, Bart; Bouten, Willem; Buijs, Roland-Jan; Kavelaars, Marwa M; Müller, Wendt; Herman, David; Matheve, Hans; Sotillo, Alejandro; Lens, Luc

2016-01-01

In this data paper, Bird tracking - GPS tracking of Lesser Black-backed Gulls and Herring Gulls breeding at the southern North Sea coast is described, a species occurrence dataset published by the Research Institute for Nature and Forest (INBO). The dataset (version 5.5) contains close to 2.5 million occurrences, recorded by 101 GPS trackers mounted on 75 Lesser Black-backed Gulls and 26 Herring Gulls breeding at the Belgian and Dutch coast. The trackers were developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). These automatically record and transmit bird movements, which allows us and others to study their habitat use and migration behaviour in great detail. Our bird tracking network is operational since 2013. It is funded for LifeWatch by the Hercules Foundation and maintained in collaboration with UvA-BiTS and the Flanders Marine Institute (VLIZ). The recorded data are periodically released in bulk as open data (http://dataset.inbo.be/bird-tracking-gull-occurrences), and are also accessible through CartoDB and the Global Biodiversity Information Facility (GBIF).

Dietary Compositions and Their Seasonal Shifts in Japanese Resident Birds, Estimated from the Analysis of Volunteer Monitoring Data

PubMed Central

Yoshikawa, Tetsuro; Osada, Yutaka

2015-01-01

Determining the composition of a bird’s diet and its seasonal shifts are fundamental for understanding the ecology and ecological functions of a species. Various methods have been used to estimate the dietary compositions of birds, which have their own advantages and disadvantages. In this study, we examined the possibility of using long-term volunteer monitoring data as the source of dietary information for 15 resident bird species in Kanagawa Prefecture, Japan. The data were collected from field observations reported by volunteers of regional naturalist groups. Based on these monitoring data, we calculated the monthly dietary composition of each bird species directly, and we also estimated unidentified items within the reported foraging episodes using Bayesian models that contained additional information regarding foraging locations. Next, to examine the validity of the estimated dietary compositions, we compared them with the dietary information for focal birds based on stomach analysis methods, collected from past literatures. The dietary trends estimated from the monitoring data were largely consistent with the general food habits determined from the previous studies of focal birds. Thus, the estimates based on the volunteer monitoring data successfully detected noticeable seasonal shifts in many of the birds from plant materials to animal diets during spring—summer. Comparisons with stomach analysis data supported the qualitative validity of the monitoring-based dietary information and the effectiveness of the Bayesian models for improving the estimates. This comparison suggests that one advantage of using monitoring data is its ability to detect dietary items such as fleshy fruits, flower nectar, and vertebrates. These results emphasize the potential importance of observation data collecting and mining by citizens, especially free descriptive observation data, for use in bird ecology studies. PMID:25723544

77 FR 65201 - Proposed Information Collection; Alaska Migratory Bird Subsistence Harvest Household Survey

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-25

... use of migratory birds and their eggs for subsistence use by indigenous inhabitants of Alaska. The... migratory birds and their eggs by indigenous inhabitants of Alaska do not significantly increase the take of...

Magpies can use local cues to retrieve their food caches.

PubMed

Feenders, Gesa; Smulders, Tom V

2011-03-01

Much importance has been placed on the use of spatial cues by food-hoarding birds in the retrieval of their caches. In this study, we investigate whether food-hoarding birds can be trained to use local cues ("beacons") in their cache retrieval. We test magpies (Pica pica) in an active hoarding-retrieval paradigm, where local cues are always reliable, while spatial cues are not. Our results show that the birds use the local cues to retrieve their caches, even when occasionally contradicting spatial information is available. The design of our study does not allow us to test rigorously whether the birds prefer using local over spatial cues, nor to investigate the process through which they learn to use local cues. We furthermore provide evidence that magpies develop landmark preferences, which improve their retrieval accuracy. Our findings support the hypothesis that birds are flexible in their use of memory information, using a combination of the most reliable or salient information to retrieve their caches. © Springer-Verlag 2010

A Bioacoustic Record of a Conservancy in the Mount Kenya Ecosystem

PubMed Central

Muchiri, David; Njoroge, Peter

2016-01-01

Abstract Background Environmental degradation is a major threat facing ecosystems around the world. In order to determine ecosystems in need of conservation interventions, we must monitor the biodiversity of these ecosystems effectively. Bioacoustic approaches offer a means to monitor ecosystems of interest in a sustainable manner. In this work we show how a bioacoustic record from the Dedan Kimathi University wildlife conservancy, a conservancy in the Mount Kenya ecosystem, was obtained in a cost effective manner. A subset of the dataset was annotated with the identities of bird species present since they serve as useful indicator species. These data reveal the spatial distribution of species within the conservancy and also point to the effects of major highways on bird populations. This dataset will provide data to train automatic species recognition systems for birds found within the Mount Kenya ecosystem. Such systems are necessary if bioacoustic approaches are to be employed at the large scales necessary to influence wildlife conservation measures. New information We provide acoustic recordings from the Dedan Kimathi University wildlife conservancy, a conservancy in the Mount Kenya ecosystem, obtained using a low cost acoustic recorder. A total of 2701 minute long recordings are provided including both daytime and nighttime recordings. We present an annotation of a subset of the daytime recordings indicating the bird species present in the recordings. The dataset contains recordings of at least 36 bird species. In addition, the presence of a few nocturnal species within the conservancy is also confirmed. PMID:27932917

Practical problems in controlling H5N1 high pathogenicity avian influenza at village level in Vietnam and introduction of biosecurity measures.

PubMed

Cristalli, Alessandro; Capua, Ilaria

2007-03-01

After a consultancy mission funded by a nongovernmental organization (NGO), information was collected on the dynamics of avian influenza (AI) infection at the rural level in a Vietnamese province with several ongoing outbreaks. AI outbreaks are frequent at village level due to environmental, ecological, agroecological, physical, social, and cultural factors, the underlying factor being poor hygienic conditions. Viral circulation is facilitated by the interactions of the integrated aquaculture, animal raising, horticulture agroecosystem, which relies in the peculiar integration of aquaculture (ponding), animal activities, and horticulture and by the connections with the live-bird market system. The interactions of these factors determine the complex system in which wild birds interact with domestic birds and in which people are constantly exposed to sources of infection, leading to the association between poverty and AI infection in humans. This experience underlines that despite all efforts by the Vietnamese Government, international institutions, and the NGO sector, awareness of AI at the village level needs to be improved. In turn, the leading institutions and international donors funding projects of technical cooperation aimed at tackling AI in Vietnam should invest in a system based on a deep knowledge of the practical problems of village condition to address AI with an effective approach. On the basis of the data collected during the mission, particularly on rural and semi-intensive poultry rearing systems, proposals that encompass the application of an effective vaccination strategy including backyard flocks coupled with dissemination of relevant information on biosecurity measures have been developed for decision makers.

The role of the North American Breeding Bird Survey in conservation

USGS Publications Warehouse

Hudson, Marie-Anne R.; Francis, Charles M.; Campbell, Kate J.; Downes, Constance M.; Smith, Adam C.; Pardieck, Keith L.

2017-01-01

The North American Breeding Bird Survey (BBS) was established in 1966 in response to a lack of quantitative data on changes in the populations of many bird species at a continental scale, especially songbirds. The BBS now provides the most reliable regional and continental trends and annual indices of abundance available for >500 bird species. This paper reviews some of the ways in which BBS data have contributed to bird conservation in North America over the past 50 yr, and highlights future program enhancement opportunities. BBS data have contributed to the listing of species under the Canadian Species at Risk Act and, in a few cases, have informed species assessments under the U.S. Endangered Species Act. By raising awareness of population changes, the BBS has helped to motivate bird conservation efforts through the creation of Partners in Flight. BBS data have been used to determine priority species and locations for conservation action at regional and national scales through Bird Conservation Region strategies and Joint Ventures. Data from the BBS have provided the quantitative foundation for North American State of the Birds reports, and have informed the public with regard to environmental health through multiple indicators, such as the Canadian Environmental Sustainability Indicators and the U.S. Environmental Protection Agency's Report on the Environment. BBS data have been analyzed with other data (e.g., environmental, land cover, and demographic) to evaluate potential drivers of population change, which have then informed conservation actions. In a few cases, BBS data have contributed to the evaluation of management actions, including informing the management of Mourning Doves (Zenaida macroura), Wood Ducks (Aix sponsa), and Golden Eagles (Aquila chrysaetos). Improving geographic coverage in northern Canada and in Mexico, improving the analytical approaches required to integrate data from other sources and to address variation in detectability, and completing the database, by adding historical bird data at each point count location and pinpointing the current point count locations would further enhance the survey's value.

Forest management under uncertainty for multiple bird population objectives

USGS Publications Warehouse

Moore, C.T.; Plummer, W.T.; Conroy, M.J.; Ralph, C. John; Rich, Terrell D.

2005-01-01

We advocate adaptive programs of decision making and monitoring for the management of forest birds when responses by populations to management, and particularly management trade-offs among populations, are uncertain. Models are necessary components of adaptive management. Under this approach, uncertainty about the behavior of a managed system is explicitly captured in a set of alternative models. The models generate testable predictions about the response of populations to management, and monitoring data provide the basis for assessing these predictions and informing future management decisions. To illustrate these principles, we examine forest management at the Piedmont National Wildlife Refuge, where management attention is focused on the recovery of the Red-cockaded Woodpecker (Picoides borealis) population. However, managers are also sensitive to the habitat needs of many non-target organisms, including Wood Thrushes (Hylocichla mustelina) and other forest interior Neotropical migratory birds. By simulating several management policies on a set of-alternative forest and bird models, we found a decision policy that maximized a composite response by woodpeckers and Wood Thrushes despite our complete uncertainty regarding system behavior. Furthermore, we used monitoring data to update our measure of belief in each alternative model following one cycle of forest management. This reduction of uncertainty translates into a reallocation of model influence on the choice of optimal decision action at the next decision opportunity.

Influence of land use and climate on wetland breeding birds in the Prairie Pothole region of Canada

USGS Publications Warehouse

Forcey, G.M.; Linz, G.M.; Thogmartin, W.E.; Bleier, W.J.

2007-01-01

Bird populations are influenced by a variety of factors at both small and large scales that range from the presence of suitable nesting habitat, predators, and food supplies to climate conditions and land-use patterns. We evaluated the influences of regional climate and land-use variables on wetland breeding birds in the Canada section of Bird Conservation Region 11 (CA-BCR11), the Prairie Potholes. We used bird abundance data from the North American Breeding Bird Survey, land-use data from the Prairie Farm Rehabilitation Administration, and weather data from the National Climatic Data and Information Archive to model effects of regional environmental variables on bird abundance. Models were constructed a priori using information from published habitat associations in the literature, and fitting was performed with WinBUGS using Markov chain Monte Carlo techniques. Both land-use and climate variables contributed to predicting bird abundance in CA-BCR11, although climate predictors contributed the most to improving model fit. Examination of regional effects of climate and land use on wetland birds in CA-BCR11 revealed relationships with environmental covariates that are often overlooked by small-scale habitat studies. Results from these studies can be used to improve conservation and management planning for regional populations of avifauna. ?? 2007 NRC.

Miscellaneous chemical toxins

USGS Publications Warehouse

Friend, M.

1999-01-01

The previous chapters provide information about some of the chemical toxins that have lethal effects on wild birds. The material presented in Section 7, Chemical Toxins, is far from comprehensive because wild birds are poisoned by a wide variety of toxic substances. Also, monitoring of wild bird mortality is not yet organized so that diagnostic findings can be extended to reflect the relative impacts among the types of toxins, within populations, or among species, geographic areas, and time. The data that are available are not collectively based on random sampling, nor do specimen collection and submission follow methodical assessment methods. Instead, most data simply document individual bird poisoning events. The inherent biases in this information include the species of birds observed dead (large birds in open areas are more likely to be observed dead than small forest birds); the species of birds likely to be submitted for analysis (bald eagles are more likely to be submitted than house sparrows); collection sites (agricultural fields are more likely to be observed than urban environments); geographic area of the country; season; reasons for submissions; and other variables. Nevertheless, findings from individual events reflect the causes of mortality associated with those events and collectively identify chemical toxins that repeatedly cause bird mortalities which result in carcass collection and sub

Wintering Waterbirds and Recreationists in Natural Areas: A Sociological Approach to the Awareness of Bird Disturbance

NASA Astrophysics Data System (ADS)

Le Corre, Nicolas; Peuziat, Ingrid; Brigand, Louis; Gélinaud, Guillaume; Meur-Férec, Catherine

2013-10-01

Disturbance to wintering birds by human recreational activities has become a major concern for managers of many natural areas. Few studies have examined how recreationists perceive their effects on birds, although this impacts their behavior on natural areas. We surveyed 312 users on two coastal ornithological sites in Brittany, France, to investigate their perception of the effects of human activities on wintering birds. The results show that the awareness of environmental issues and knowledge of bird disturbance depends on the socioeconomic characteristics of each user group, both between the two sites and within each site. Results also indicate that, whatever the site and the user group, the vast majority of the respondents (77.6 %) believed that their own presence had no adverse effects on the local bird population. Various arguments were put forward to justify the users' own harmlessness. Objective information on recreationists' awareness of environmental issues, and particularly on their own impact on birds, is important to guide managers in their choice of the most appropriate visitor educational programs. We recommend developing global but also specific educational information for each type of user to raise awareness of their own impact on birds.

Furnished cage system and hen well-being: Comparative effects of furnished cages and battery cages on behavioral exhibitions in White Leghorn chickens.

PubMed

Pohle, K; Cheng, H-W

2009-08-01

The battery cage system is being banned in the European Union before or by 2012, and the furnished cage system will be the only cage system allowed after 2012. This study was conducted to examine the different effects of caging systems, furnished cages vs. battery cages, on bird behaviors. One hundred ninety-two 1-d-old non-beak-trimmed Hy-Line W-36 White Leghorn chicks were reared using standard management practices in raised wire cages. At 19 wk of age, the birds were randomly assigned into battery cages or furnished cages. The battery cages were commercial wire cages containing 6 birds per cage, providing 645 cm(2) of floor space per birds. The furnished cages had wire floors and solid metal walls, with perches, a dustbathing area, scratch pads, and a nestbox area with a concealment curtain. Based on the company recommendations, 10 birds were housed per cage, providing a stocking density of 610 cm(2) of floor space per bird. Behavioral observations were conducted using the Noldus Observer software package. The birds were observed at 5-min intervals for the entire light period. The birds housed in battery cages had higher posture and behavioral transitions and increased time spent walking and performing exploratory behavior (P < 0.05, 0.01, respectively), which may indicate they were stressed, resulting in restlessness, whereas the birds housed in furnished cages had higher levels of preening (P < 0.05). Preening has been considered as a comfort behavior in birds. These results may suggest that furnished cages may be a favorable alternative system for housing birds by allowing them to perform certain natural behaviors.

Rice production systems and avian influenza: Interactions between mixed-farming systems, poultry and wild birds

USGS Publications Warehouse

Muzaffar, S.B.; Takekawa, John Y.; Prosser, D.J.; Newman, S.H.; Xiao, X.

2010-01-01

Wild waterfowl are the reservoir for avian influenza viruses (AIVs), a family of RNA viruses that may cause mild sickness in waterbirds. Emergence of H5N1, a highly pathogenic avian influenza (HPAI) strain, causing severe disease and mortality in wild birds, poultry and humans, had raised concerns about the role of wild birds in possible transmission of the disease. In this review, the link between rice production systems, poultry production systems, and wild bird ecology is examined to assess the extent to which these interactions could contribute towards the persistence and evolution of HPAI H5N1. The rice (Oryza sativa) and poultry production systems in Asia described, and then migration and movements of wild birds discussed. Mixed farming systems in Asia and wild bird movement and migration patterns create opportunities for the persistence of low pathogenic AIVs in these systems. Nonetheless, there is no evidence of long-term persistence of HPAI viruses (including the H5N1 subtype) in the wild. There are still significant gaps in the understanding of how AIVs circulate in rice systems. A better understanding of persistence of AIVs in rice farms, particularly of poultry origins, is essential in limiting exchange of AIVs between mixed-farming systems, poultry and wild birds.

Trade-offs between cattle production and bird conservation in an agricultural frontier of the Gran Chaco of Argentina.

PubMed

Mastrangelo, Matias E; Gavin, Michael C

2012-12-01

Intensification of food production in tropical landscapes in the absence of land-use planning can pose a major threat to biological diversity. Decisions on whether to spatially integrate or segregate lands for production and conservation depend in part on the functional relations between biological diversity and agricultural productivity. We measured diversity, density, and species composition of birds along a gradient of production intensification on an agricultural frontier of the Argentine Chaco, where dry tropical forests are cleared for cattle production. Bird species diversity in intact forests was higher than in any type of cattle-production system. Bird species richness decreased nonlinearly as cattle yield increased. Intermediate-intensity silvopastoral systems, those in which forest understory is selectively cleared to grow pastures of non-native plants beneath the tree canopy, produced 80% of the mean cattle yield obtained in pastures on cleared areas and were occupied by 70-90% of the number of bird species present in the nearest forest fragments. Densities of >50% of bird species were significantly lower in open pastures than in silvopastoral systems. Therefore, intermediate-intensity silvopastoral systems may have the greatest potential to sustain cattle yield and conserve a large percentage of bird species. However, compared with low-intensity production systems, in which forest structure and extent were intact, intermediate-intensity silvopastoral systems supported significantly fewer forest-restricted bird species and fewer frugivorous birds. These data suggest that the integration of production and conservation through intermediate-intensity silvopastoral systems combined with the protection of forest fragments may be required to maintain cattle yield, bird diversity, and conservation of forest-restricted species in this agricultural frontier. ©2012 Society for Conservation Biology.

A VidEo-Based Intelligent Recognition and Decision System for the Phacoemulsification Cataract Surgery.

PubMed

Tian, Shu; Yin, Xu-Cheng; Wang, Zhi-Bin; Zhou, Fang; Hao, Hong-Wei

2015-01-01

The phacoemulsification surgery is one of the most advanced surgeries to treat cataract. However, the conventional surgeries are always with low automatic level of operation and over reliance on the ability of surgeons. Alternatively, one imaginative scene is to use video processing and pattern recognition technologies to automatically detect the cataract grade and intelligently control the release of the ultrasonic energy while operating. Unlike cataract grading in the diagnosis system with static images, complicated background, unexpected noise, and varied information are always introduced in dynamic videos of the surgery. Here we develop a Video-Based Intelligent Recognitionand Decision (VeBIRD) system, which breaks new ground by providing a generic framework for automatically tracking the operation process and classifying the cataract grade in microscope videos of the phacoemulsification cataract surgery. VeBIRD comprises a robust eye (iris) detector with randomized Hough transform to precisely locate the eye in the noise background, an effective probe tracker with Tracking-Learning-Detection to thereafter track the operation probe in the dynamic process, and an intelligent decider with discriminative learning to finally recognize the cataract grade in the complicated video. Experiments with a variety of real microscope videos of phacoemulsification verify VeBIRD's effectiveness.

A VidEo-Based Intelligent Recognition and Decision System for the Phacoemulsification Cataract Surgery

PubMed Central

Yin, Xu-Cheng; Wang, Zhi-Bin; Zhou, Fang; Hao, Hong-Wei

2015-01-01

The phacoemulsification surgery is one of the most advanced surgeries to treat cataract. However, the conventional surgeries are always with low automatic level of operation and over reliance on the ability of surgeons. Alternatively, one imaginative scene is to use video processing and pattern recognition technologies to automatically detect the cataract grade and intelligently control the release of the ultrasonic energy while operating. Unlike cataract grading in the diagnosis system with static images, complicated background, unexpected noise, and varied information are always introduced in dynamic videos of the surgery. Here we develop a Video-Based Intelligent Recognitionand Decision (VeBIRD) system, which breaks new ground by providing a generic framework for automatically tracking the operation process and classifying the cataract grade in microscope videos of the phacoemulsification cataract surgery. VeBIRD comprises a robust eye (iris) detector with randomized Hough transform to precisely locate the eye in the noise background, an effective probe tracker with Tracking-Learning-Detection to thereafter track the operation probe in the dynamic process, and an intelligent decider with discriminative learning to finally recognize the cataract grade in the complicated video. Experiments with a variety of real microscope videos of phacoemulsification verify VeBIRD's effectiveness. PMID:26693249

Information Processing in Living Systems

NASA Astrophysics Data System (ADS)

Tkačik, Gašper; Bialek, William

2016-03-01

Life depends as much on the flow of information as on the flow of energy. Here we review the many efforts to make this intuition precise. Starting with the building blocks of information theory, we explore examples where it has been possible to measure, directly, the flow of information in biological networks, or more generally where information-theoretic ideas have been used to guide the analysis of experiments. Systems of interest range from single molecules (the sequence diversity in families of proteins) to groups of organisms (the distribution of velocities in flocks of birds), and all scales in between. Many of these analyses are motivated by the idea that biological systems may have evolved to optimize the gathering and representation of information, and we review the experimental evidence for this optimization, again across a wide range of scales.

Bird Use of Grassland Habitat Patches at a Military Airfield

EPA Science Inventory

In light of reported declines in grassland bird populations in North America, information about their use of airfield habitats can help inform management decisions in the context of conflicting objectives of minimizing wildlife-aircraft collisions and helping to conserve grasslan...

National Audubon society's technology initiatives for bird conservation: a summary of application development for the Christmas bird count

Treesearch

Kathy Dale

2005-01-01

Since 1998, Audubon's Christmas Bird Count (CBC) has been supported by an Internet-based data entry application that was initially designed to accommodate the traditional paper-based methods of this long-running bird monitoring program. The first efforts to computerize the data and the entry procedures have informed a planned strategy to revise the current...

Hierarchical models and bayesian analysis of bird survey information

Treesearch

John R. Sauer; William A. Link; J. Andrew Royle

2005-01-01

Summary of bird survey information is a critical component of conservation activities, but often our summaries rely on statistical methods that do not accommodate the limitations of the information. Prioritization of species requires ranking and analysis of species by magnitude of population trend, but often magnitude of trend is a misleading measure of actual decline...

Workshop proceedings: management of western forests and grasslands for nongame birds

Treesearch

USDA Forest Service

1980-01-01

Contains proceedings of the fourth and last regional workshop sponsored by the National Nongame Bird Steering Committee. The workshop, held in Salt Lake City, Utah, February 11-14, 1980, presented information on management of western forests and grasslands for nongame birds.

Tracking Avian Reservoirs of Arboviruses using Remote Sensing and Radiotelemetry

NASA Technical Reports Server (NTRS)

Beck, L.; Wright, S.; Schmidt, C.; Lobitz, B.; Bell, D.; Brown, D.; Brass, James A. (Technical Monitor)

2002-01-01

Encephalitis is caused by a virus that is transmitted by mosquitoes between mammalian hosts. The virus is closely related to the West Nile virus (WNV), which started in New York in 1999, and has since spread to 25 states. Like encephalitis, WNV is vectored by mosquitoes, and the primary hosts are birds; humans are accidental, or'dead-end' hosts. Very little is understood about the behavior of these bird populations, and how they intersect - both in time and in space - with mosquito populations. Exploring these relationships is the first step in developing models for encephalitis and WNV transmission risk. This project combines remotely sensed data with radiotelemetry to create a spatiotemporal map of encephalitis viral activity in bird and mosquito populations in the Sacramento Valley of California. Specifically, remote sensing (RS) and geographic information system (GIS) technologies were used to characterize habitats utilized by both avian viral reservoirs and the mosquitoes that vector encephalitis. Radiotelemetry and serosurveys (blood) were then used to spatially and temporally track the patterns of infection. The project uses Landsat ETM+ multitemporal satellite data to characterize habitats utilized by both birds and the mosquito vectors. Mist nets were used to sample members of individual flocks of blackbirds and cowbirds over a period of several months; these birds were then bled to assess their viral status, banded, and fitted with transmitters. Radiotelemetry was used to spatially and temporally track the distribution of banded birds and their associated flocks. The movement of these indicator flocks were compared with the location of remotely sensed (adult and larval) mosquito habitats to determine the intersection of bird's and vectors; this is key in understanding where and when transmission occurs from bird to bird, as well as from bird to mammal, via mosquito. The relationships found during the project are being used to generate a model of encephalitis transmission risk in California.

Life-history and phenotypic traits of insectivorous songbirds breeding on reclaimed mine land reveal ecological constraints.

PubMed

O'Brien, Erin L; Dawson, Russell D

2016-05-15

Studies assessing impacts of industrial activities on wildlife typically examine population- or community-level responses. However, changes in measures such as species abundance or diversity are driven by cumulative responses of individuals to disturbance, and may take time to detect. Quantifying individual responses could allow us to foresee and mitigate future population declines resulting from industrial activities, while providing ecologically informative indices to assess quality of reclaimed land. We examined life-history and phenotypic traits of mountain bluebirds (Sialia currucoides) and tree swallows (Tachycineta bicolor) breeding on reclaimed copper mine lands in Canada over two years in comparison to a nearby undisturbed reference area. Bluebirds feed on terrestrial invertebrates, whereas swallows feed on adult forms of insects with aquatic larvae, allowing us to assess quality of both reclaimed terrestrial and aquatic systems as habitat for insectivorous birds. Supplemental feeding of bluebirds also was used to experimentally assess nutritional limitation of birds feeding on terrestrial invertebrates. Bluebirds on reclaimed land initiated clutches later, and in one year had lower fledging success compared to birds on the reference area. Tree swallows also bred later in the season on reclaimed land, but were otherwise comparable to or exceeded performance of birds on the reference area. Annual differences in responses of nestling bluebirds on the mine to supplemental feeding revealed an apparent switch in life-history strategy of parents between years, from brood reduction to brood survival, suggesting greater annual fluctuations in ecological conditions within terrestrial systems on reclaimed land. Sex differences in response of nestling bluebirds to food supplementation additionally suggested high within-brood competition for food on reclaimed land. We suggest that measures of avian life-history and phenotypic traits, particularly when assessed over multiple years using experimental approaches such as food supplementation, are informative and sensitive indices of the health of reclaimed terrestrial and aquatic systems. Copyright © 2016 Elsevier B.V. All rights reserved.

The role of the antioxidant system during intense endurance exercise: lessons from migrating birds.

PubMed

Cooper-Mullin, Clara; McWilliams, Scott R

2016-12-01

During migration, birds substantially increase their metabolic rate and burn fats as fuel and yet somehow avoid succumbing to overwhelming oxidative damage. The physiological means by which vertebrates such as migrating birds can counteract an increased production of reactive species (RS) are rather limited: they can upregulate their endogenous antioxidant system and/or consume dietary antioxidants (prophylactically or therapeutically). Thus, birds can alter different components of their antioxidant system to respond to the demands of long-duration flights, but much remains to be discovered about the complexities of RS production and antioxidant protection throughout migration. Here, we use bird migration as an example to discuss how RS are produced during endurance exercise and how the complex antioxidant system can protect against cellular damage caused by RS. Understanding how a bird's antioxidant system responds during migration can lend insights into how antioxidants protect birds during other life-history stages when metabolic rate may be high, and how antioxidants protect other vertebrates from oxidative damage during endurance exercise. © 2016. Published by The Company of Biologists Ltd.

Avian sex, sex chromosomes, and dosage compensation in the age of genomics.

PubMed

Graves, Jennifer A Marshall

2014-04-01

Comparisons of the sex chromosome systems in birds and mammals are widening our view and deepening our understanding of vertebrate sex chromosome organization, function, and evolution. Birds have a very conserved ZW system of sex determination in which males have two copies of a large, gene-rich Z chromosome, and females have a single Z and a female-specific W chromosome. The avian ZW system is quite the reverse of the well-studied mammalian XY chromosome system, and evolved independently from different autosomal blocs. Despite the different gene content of mammal and bird sex chromosomes, there are many parallels. Genes on the bird Z and the mammal X have both undergone selection for male-advantage functions, and there has been amplification of male-advantage genes and accumulation of LINEs. The bird W and mammal Y have both undergone extensive degradation, but some birds retain early stages and some mammals terminal stages of the process, suggesting that the process is more advanced in mammals. Different sex-determining genes, DMRT1 and SRY, define the ZW and XY systems, but DMRT1 is involved in downstream events in mammals. Birds show strong cell autonomous specification of somatic sex differences in ZZ and ZW tissue, but there is growing evidence for direct X chromosome effects on sexual phenotype in mammals. Dosage compensation in birds appears to be phenotypically and molecularly quite different from X inactivation, being partial and gene-specific, but both systems use tools from the same molecular toolbox and there are some signs that galliform birds represent an early stage in the evolution of a coordinated system.

Forest to agriculture conversion in southern Belize: Implications for migrant land birds

USGS Publications Warehouse

Spruce, J.P.; Dowell, B.A.; Robbins, C.S.; Sader, S.A.; Doyle, Jamie K.; Schelhas, John

1993-01-01

Central America offers a suite of neotropical habitats vital to overwintering migrant land birds. The recent decline of many forest dwelling avian migrants is believed to be related in part to neotropical deforestation and land use change. However, spatio-temporal trends in neotropical habitat availability and avian migrant habitat use are largely unknown. Such information is needed to assess the impact of agriculture conversion on migrant land birds. In response, the USDI Fish and Wildlife Service and the University of Maine began a cooperative study in 1988 which applies remote sensing and field surveys to determine current habitat availability and avian migrant habitat use. Study sites include areas in Belize, Costa Rica, Guatemala and southern Mexico. Visual assessment of Landsat TM imagery indicates southern Belize forests are fragmented by various agricultural systems. Shifting agriculture is predominant in some areas, while permanent agriculture (citrus and mixed animal crops) is the primary system in others. This poster focuses on efforts to monitor forest to agriculture conversion in southern Belize using remote sensing, field surveys and GIS techniques. Procedures and avian migrant use of habitat are summarized.

The net return from animal activity in agro-ecosystems: trading off benefits from ecosystem services against costs from crop damage.

PubMed

Luck, Gary W

2013-01-01

Animals provide benefits to agriculture through the provision of ecosystem services, but also inflict costs such as damaging crops. These benefits and costs are mostly examined independently, rather than comparing the trade-offs of animal activity in the same system and quantifying the net return from beneficial minus detrimental activities. Here, I examine the net return associated with the activity of seed-eating birds in almond orchards by quantifying the economic costs and benefits of bird consumption of almonds. Pre-harvest, the consumption of harvestable almonds by birds cost growers AUD$57.50 ha (-1) when averaged across the entire plantation. Post-harvest, the same bird species provide an ecosystem service by removing mummified nuts from trees that growers otherwise need to remove to reduce threats from fungal infection or insect pest infestations. The value of this ecosystem service ranged from AUD$82.50 ha (-1)-$332.50 ha (-1) based on the replacement costs of mechanical or manual removal of mummified nuts, respectively. Hence, bird consumption of almonds yielded a positive net return of AUD$25-$275 ha (-1) averaged across the entire plantation. However, bird activity varied spatially resulting in positive net returns occurring primarily at the edges of crops where activity was higher, compared to negative net returns in crop interiors. Moreover, partial mummy nut removal by birds meant that bird activity may only reduce costs to growers rather than replace these costs completely. Similar cost-benefit trade-offs exist across nature, and quantifying net returns can better inform land management decisions such as when to control pests or promote ecosystem service provision.

The net return from animal activity in agro-ecosystems: trading off benefits from ecosystem services against costs from crop damage

PubMed Central

Luck, Gary W

2014-01-01

Animals provide benefits to agriculture through the provision of ecosystem services, but also inflict costs such as damaging crops. These benefits and costs are mostly examined independently, rather than comparing the trade-offs of animal activity in the same system and quantifying the net return from beneficial minus detrimental activities. Here, I examine the net return associated with the activity of seed-eating birds in almond orchards by quantifying the economic costs and benefits of bird consumption of almonds. Pre-harvest, the consumption of harvestable almonds by birds cost growers AUD$57.50 ha -1 when averaged across the entire plantation. Post-harvest, the same bird species provide an ecosystem service by removing mummified nuts from trees that growers otherwise need to remove to reduce threats from fungal infection or insect pest infestations. The value of this ecosystem service ranged from AUD$82.50 ha -1–$332.50 ha -1 based on the replacement costs of mechanical or manual removal of mummified nuts, respectively. Hence, bird consumption of almonds yielded a positive net return of AUD$25–$275 ha -1 averaged across the entire plantation. However, bird activity varied spatially resulting in positive net returns occurring primarily at the edges of crops where activity was higher, compared to negative net returns in crop interiors. Moreover, partial mummy nut removal by birds meant that bird activity may only reduce costs to growers rather than replace these costs completely. Similar cost-benefit trade-offs exist across nature, and quantifying net returns can better inform land management decisions such as when to control pests or promote ecosystem service provision. PMID:25285202

Finding a Place to Live.

ERIC Educational Resources Information Center

NatureScope, 1985

1985-01-01

Provides background information and student activities on bird habitats, how birds have adapted to living in these habitats, and bird migration. Each activity includes an objective, recommended age level(s), subject area(s), list of materials needed, and procedures. Ready-to-copy student materials (puzzles and worksheets) are included. (JN)

50 CFR 92.11 - Regional management areas.

Code of Federal Regulations, 2011 CFR

2011-10-01

... (CONTINUED) MISCELLANEOUS PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA Program Structure § 92.11... informed of issues related to the subsistence harvest of migratory birds. (6) Work cooperatively with the U... harvesting of migratory birds. They must develop requests and recommendations from the region to be presented...

50 CFR 92.11 - Regional management areas.

Code of Federal Regulations, 2010 CFR

2010-10-01

... (CONTINUED) MISCELLANEOUS PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA Program Structure § 92.11... informed of issues related to the subsistence harvest of migratory birds. (6) Work cooperatively with the U... harvesting of migratory birds. They must develop requests and recommendations from the region to be presented...

Whole-genome analysis of mycobacteria from birds at the San Diego Zoo.

PubMed

Pfeiffer, Wayne; Braun, Josephine; Burchell, Jennifer; Witte, Carmel L; Rideout, Bruce A

2017-01-01

Mycobacteria isolated from more than 100 birds diagnosed with avian mycobacteriosis at the San Diego Zoo and its Safari Park were cultured postmortem and had their whole genomes sequenced. Computational workflows were developed and applied to identify the mycobacterial species in each DNA sample, to find single-nucleotide polymorphisms (SNPs) between samples of the same species, to further differentiate SNPs between as many as three different genotypes within a single sample, and to identify which samples are closely clustered genomically. Nine species of mycobacteria were found in 123 samples from 105 birds. The most common species were Mycobacterium avium and Mycobacterium genavense, which were in 49 and 48 birds, respectively. Most birds contained only a single mycobacterial species, but two birds contained a mixture of two species. The M. avium samples represent diverse strains of M. avium avium and M. avium hominissuis, with many pairs of samples differing by hundreds or thousands of SNPs across their common genome. By contrast, the M. genavense samples are much closer genomically; samples from 46 of 48 birds differ from each other by less than 110 SNPs. Some birds contained two, three, or even four genotypes of the same bacterial species. Such infections were found in 4 of 49 birds (8%) with M. avium and in 11 of 48 birds (23%) with M. genavense. Most were mixed infections, in which the bird was infected by multiple mycobacterial strains, but three infections with two genotypes differing by ≤ 10 SNPs were likely the result of within-host evolution. The samples from 31 birds with M. avium can be grouped into nine clusters within which any sample is ≤ 12 SNPs from at least one other sample in the cluster. Similarly, the samples from 40 birds with M. genavense can be grouped into ten such clusters. Information about these genomic clusters is being used in an ongoing, companion study of mycobacterial transmission to help inform management of bird collections.

Whole-genome analysis of mycobacteria from birds at the San Diego Zoo

PubMed Central

Pfeiffer, Wayne; Braun, Josephine; Burchell, Jennifer; Witte, Carmel L.; Rideout, Bruce A.

2017-01-01

Methods Mycobacteria isolated from more than 100 birds diagnosed with avian mycobacteriosis at the San Diego Zoo and its Safari Park were cultured postmortem and had their whole genomes sequenced. Computational workflows were developed and applied to identify the mycobacterial species in each DNA sample, to find single-nucleotide polymorphisms (SNPs) between samples of the same species, to further differentiate SNPs between as many as three different genotypes within a single sample, and to identify which samples are closely clustered genomically. Results Nine species of mycobacteria were found in 123 samples from 105 birds. The most common species were Mycobacterium avium and Mycobacterium genavense, which were in 49 and 48 birds, respectively. Most birds contained only a single mycobacterial species, but two birds contained a mixture of two species. The M. avium samples represent diverse strains of M. avium avium and M. avium hominissuis, with many pairs of samples differing by hundreds or thousands of SNPs across their common genome. By contrast, the M. genavense samples are much closer genomically; samples from 46 of 48 birds differ from each other by less than 110 SNPs. Some birds contained two, three, or even four genotypes of the same bacterial species. Such infections were found in 4 of 49 birds (8%) with M. avium and in 11 of 48 birds (23%) with M. genavense. Most were mixed infections, in which the bird was infected by multiple mycobacterial strains, but three infections with two genotypes differing by ≤ 10 SNPs were likely the result of within-host evolution. The samples from 31 birds with M. avium can be grouped into nine clusters within which any sample is ≤ 12 SNPs from at least one other sample in the cluster. Similarly, the samples from 40 birds with M. genavense can be grouped into ten such clusters. Information about these genomic clusters is being used in an ongoing, companion study of mycobacterial transmission to help inform management of bird collections. PMID:28267758

Eccentric preformative molt in the spotted Towhee

DOE PAGES

Fettig, Stephen M.; Hathcock, Charles Dean

2016-11-04

Examination of wing-feather molt often provides information essential for aging birds in the hand (Mulvihill 1993, pyle 1997b, 2008). Correctly aging birds is important for understanding the causal relationships between age-class survival rates and population changes (DeSante et al. 2005). For example, correctly aging birds facilitates understanding of climate effects on reproduction better than merely moni- toring population numbers because reproduction varies widely with annual weather patterns (DeSante and O’grady 2000). Age-class information can also provide a clear measure of habitat quality without confounding effects such as population sources and sinks (Van horne 1983) or misleading habitat-quality information based onmore » relative abundance or population size (pulliam 1988). Changes in bird populations often lag changes in the survival rate of an age class, while environmental changes often affect one age class immediately or after a short lag (Temple and Wiens 1989)« less

FireBird - a small satellite fire monitoring mission: Status and first results

NASA Astrophysics Data System (ADS)

Lorenz, Eckehard; Rücker, Gernot; Terzibaschian, Thomas; Klein, Doris; Tiemann, Joachim

2014-05-01

The scientific mission FireBird is operated by the German Aerospace Center (DLR) and consists of two small satellites. The first satellite - TET-1 - was successfully launched from Baikonur, Russia in July 2012. Its first year in orbit was dedicated to a number of experiments within the framework of the DLR On Orbit Verification (OOV) program which is dedicated to technology testing in space. After successful completion of its OOV phase, TET-1 was handed over to the DLR FireBird mission and is now a dedicated Earth Observation mission. Its primary goal is sensing of hot phenomena such as wildfires, volcanoes, gas flares and industrial hotspots. The second satellite, BiROS is scheduled for launch in the second or third quarter of 2015. The satellite builds on the heritage of the DLR BIRD (BIspectral Infrared Detection) mission and delivers quantitative information (such as Fire Radiative Power, FRP) at a spatial resolution of 350 m, superior to any current fire enabled satellite system such as NPP VIIRS, MODIS or Meteosat SEVIRI. The satellite is undergoing a four month validation phase during which satellite operations are adapted to the new mission goals of FireBIRD and processing capacities are established to guarantee swift processing and delivery of high quality data. The validation phase started with an informal Operational Readiness Review and will be completed with a formal review, covering all aspects of the space and ground segments. The satellite is equipped with a camera with a 42 m ground pixel size in the red, green and near infrared spectral range, and a 370 m ground pixel size camera in the mid and thermal infrared with a swath of 185 km. The satellite can be pointed towards a target in order to enhance observation frequency. First results of the FireBird mission include a ground validation experiment and acquisitions over fires across the world. Once the validation phase is finished the data will be made available to a wide scientific community.

Animals and How They Live.

ERIC Educational Resources Information Center

National Audubon Society, New York, NY.

This set of teaching aids consists of 14 Audubon Nature Bulletins, providing teachers and students with informational reading on animals. The bulletin titles are as follows: Birds: Their Adaptations to Ways of Life; Our Friends the Hawks; Mysteries of Bird Migration; Bird Nests; Camouflage in the Animal World; Snakes; Turtles; Frogs and Toads;…

A Psittacosis Outbreak among English Office Workers with Little or No Contact with Birds, August 2015.

PubMed

Mair-Jenkins, John; Lamming, Tracey; Dziadosz, Andy; Flecknoe, Daniel; Stubington, Thomas; Mentasti, Massimo; Muir, Peter; Monk, Philip

2018-04-27

On 14th August 2015 an office manager informed Public Health England of five employees known to have been diagnosed with pneumonia over the previous three weeks. We investigated to establish whether an outbreak occurred and to identify and control the source of infection. We undertook case finding for self-reported pneumonia cases at local businesses (July-August 2015). Clinical samples from a hospitalised case were tested for common respiratory pathogens, but returned negative results. Further testing confirmed Chlamydia psittaci infection in this case (serology and PCR).  We subsequently undertook C. psittaci testing for all cases, redefining them as confirmed ( C. psittaci PCR or high antibody titre via serology) or probable (inconclusive C. psittaci serology). Twenty-eight day exposure histories informed descriptive epidemiological analysis. We conducted an environmental investigation at the office to identify potential sources of exposure. We identified six office workers with pneumonia; four met case definitions (three confirmed, one probable) with symptom onset between 29th July and 4th August 2015. Workplace was the only epidemiological link and only one case reported limited, indirect bird contact. Environmental investigations identified pigeons roosting near the office which were being fed by workers (none cases). This was a probable outbreak of psittacosis with no direct bird-to-human contact reported. Cases recovered after receiving appropriate antibiotics. Feeding of pigeons was stopped. A deep clean of office ventilation systems was conducted and workers were advised to avoid bird contact.  We hypothesised that indirect environmental exposure to infected pigeons was to the source of this outbreak. This work provides evidence that health professionals should consider psittacosis in the differential diagnosis of cases of severe or atypical respiratory illness even without overt bird contact.

Species, gender, and identity: cracking petrels' sociochemical code.

PubMed

Mardon, Jérôme; Saunders, Sandra M; Anderson, Marti J; Couchoux, Charline; Bonadonna, Francesco

2010-05-01

Avian chemosignaling remains relatively unexplored, but its potential importance in birds' social behaviors is becoming recognized. Procellariiform seabirds provide particularly appropriate models for investigating these topics as they possess a well-developed olfactory system and unequalled associated capabilities. We present here results from a detailed chemical examination of the uropygial secretions (the main source of avian exogenous chemicals) from 2 petrel species, Antarctic prions and blue petrels. Using gas chromatography-mass spectrometry techniques and recently developed multivariate tools, we demonstrate that the secretions contain critical socioecological information such as species, gender, and individual identity. Importantly, these chemosignals correlate with some of the birds' olfactory behaviors demonstrated in the field. The molecules found to be associated with social information were essentially large unsaturated compounds, suggesting that these may be precursors of, or correlates to the actual airborne signals. Although the species-specific chemosignal may be involved in interspecific competition at the breeding grounds, the role of the sexually specific chemosignal remains unclear. The existence of individually specific signals (i.e., chemical signatures) in these birds has important implications for processes such as individual recognition and genetically based mate choice already suspected for this group. Our results open promising avenues of research for the study of avian chemical communication.

Sleep, offline processing, and vocal learning

PubMed Central

Margoliash, Daniel; Schmidt, Marc F

2009-01-01

The study of song learning and the neural song system has provided an important comparative model system for the study of speech and language acquisition. We describe some recent advances in the bird song system, focusing on the role of offline processing including sleep in processing sensory information and in guiding developmental song learning. These observations motivate a new model of the organization and role of the sensory memories in vocal learning. PMID:19906416

Meeting migratory bird management needs by integrated disease control

USGS Publications Warehouse

Friend, M.

1984-01-01

The need to combat diseases of migratory birds more effectively will intensify because of need to counteract effects of continual habitat losses. Degradation of habitat will increase potential for disease transmission and the emergence of new disease problems. Migratory bird mobility provides a ready mechanism for spread of disease to locations greatly removed from the site of initial outbreaks. Disease control and management on a flyway basis is needed to combat disease problems of migratory birds more effectively. Modifications in the flyway council system are suggested for implementation of an integrated approach to disease control. Flyway management of disease problems is not a new concept and has been used for addressing lead poisoning in waterfowl (Greenwalt 1976). However, integration of disease concepts in the management of migratory birds on a flyway basis has not been attempted to the extent identified in this paper. Information and communication needs to achieve the goal of minimizing losses of migratory birds to disease are also identified. The limited resources available for disease investigations dictate that sound planning efforts serve as the foundation for program development, priority assessment, and coordination of efforts. Effective disease control in migratory birds is achievable. However, disease control will not happen without adjustments in current perspectives and approaches to disease problems. 'A prime requisite of long range planning for animal disease control or eradication is an attitude of mind that sustains an unflagging optimism toward the ultimate accomplishment of desired results, coupled with an equally persistent skepticism toward dogmatic formulae promising either certain success or certain failure. A long range plan cannot remain inviolate. It must undergo constant critical review and modification as necessary to: accommodate newly acquired scientific or practical information; meet changing economic conditions; account for differences in available resources; and adapt to developments in the attitudes of the public toward the existence of the disease of concern and the procedures for control or eradication' (Clarkson 1973:13). I hope that the 'attitude of mind' called for in the above quotation is present to a sufficient degree within the conservation community. If so, effective control of disease in migratory birds can become reality. Like the weather - we need not just talk about it, we have the capability to do something about it. The choice is clearly ours.

50 CFR 21.12 - General exceptions to permit requirements.

Code of Federal Regulations, 2012 CFR

2012-10-01

... endangered migratory bird species. Contact information for Ecological Services offices can be located on the... euthanize. The records must include: the species of bird, the type of injury, the date of acquisition, the.... (7) For birds of species on the Federal List of Threatened or Endangered Wildlife, provided at 50 CFR...

50 CFR 21.12 - General exceptions to permit requirements.

Code of Federal Regulations, 2014 CFR

2014-10-01

... endangered migratory bird species. Contact information for Ecological Services offices can be located on the... euthanize. The records must include: the species of bird, the type of injury, the date of acquisition, the.... (7) For birds of species on the Federal List of Threatened or Endangered Wildlife, provided at 50 CFR...

50 CFR 21.12 - General exceptions to permit requirements.

Code of Federal Regulations, 2013 CFR

2013-10-01

... endangered migratory bird species. Contact information for Ecological Services offices can be located on the... euthanize. The records must include: the species of bird, the type of injury, the date of acquisition, the.... (7) For birds of species on the Federal List of Threatened or Endangered Wildlife, provided at 50 CFR...

50 CFR 21.12 - General exceptions to permit requirements.

Code of Federal Regulations, 2011 CFR

2011-10-01

... endangered migratory bird species. Contact information for Ecological Services offices can be located on the... euthanize. The records must include: the species of bird, the type of injury, the date of acquisition, the.... (7) For birds of species on the Federal List of Threatened or Endangered Wildlife, provided at 50 CFR...

50 CFR 21.12 - General exceptions to permit requirements.

Code of Federal Regulations, 2010 CFR

2010-10-01

... endangered migratory bird species. Contact information for Ecological Services offices can be located on the... euthanize. The records must include: the species of bird, the type of injury, the date of acquisition, the.... (7) For birds of species on the Federal List of Threatened or Endangered Wildlife, provided at 50 CFR...

Long-term responses of disturbance-associated birds after different timber harvests

Treesearch

Roger W. Perry; Ronald E. Thill

2013-01-01

Timber harvest provides favorable habitat for many species of shrub-dependent birds. Because of historical dominance, effect of clearcutting on early successional birds has been widely studied, but less information is available on alternatives such as shelterwood and group selection, which have become a more dominant means of regenerating pines (Pinus...

Birds

Treesearch

Jared Verner; Edward C. Beedy; Stephen L. Granholm; Lyman V. Ritter; Edward F. Toth

1980-01-01

This chapter offers information on the status, distribution (by habitat type and seral stage), and basic life history for each of 208 species of birds that are found in the western Sierra Nevada. Many of the data came from the literature, altl)ough the professional ornithologists involved with this project drew upon extensive personal experience with birds in the...

Using eBird to Integrate Citizen Science into an Undergraduate Ecology Field Laboratory

ERIC Educational Resources Information Center

Surasinghe, Thilina; Courter, Jason

2012-01-01

Encouraging nonprofessionals to participate in ecological research through citizen science programs is a recent innovation and an effective strategy for gathering ecological information across broad geographical areas. In this paper, we demonstrate how reporting field-based observations through eBird, a citizen-based birding and data-recording…

Songbird use of regenerating forest, glade, and edge habitat types

Treesearch

Alix D. Fink; Frank R., III Thompson; April A. Tudor

2006-01-01

Population numbers of many bird species associated with early-successional or disturbance-dependent habitat types are declining. We used an information-theoretic approach to evaluate hypotheses concerning factors affecting breeding bird densities in different early-successional habitat types. We studied shrubland bird communities in 3- to 5-year-old regenerating forest...

77 FR 53117 - Migratory Bird Hunting; Final Frameworks for Early-Season Migratory Bird Hunting Regulations

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-30

... reduce or control overabundant resident Canada geese populations. Increasing the daily bag limit from 8 to 15 geese may help both States reduce or control existing high populations of resident Canada geese... our Migratory Bird Surveys and assigned control number 1018-0023 (expires 4/30/2014). This information...

Coordinated bird monitoring: Technical recommendations for military lands

USGS Publications Warehouse

Bart, Jonathan; Manning, Ann; Fischer, Richard; Eberly, Chris

2012-01-01

The Department of Defense (DoD) is subject to several rules and regulations establishing responsibilities for monitoring migratory birds. The Sikes Act requires all military installations with significant natural resources to prepare and implement Integrated Natural Resources Management Plans (INRMPs). These plans guide the conservation and long-term management of natural resources on military lands in a manner that is compatible with and sustains the military mission. An INRMP also supports compliance with all legal requirements and guides the military in fulfilling its obligation to be a good steward of public land.The management and conservation of migratory birds is addressed in installation INRMPs. The National Environmental Policy Act (NEPA) requires federal agencies to evaluate and disclose the potential environmental impacts of their proposed actions. More recently, DoD signed an MOU (http://www.dodpif.org/downloads/EO13186_MOU-DoD.pdf) for migratory birds, under Executive Order 13186, with the US Fish and Wildlife Service (USFWS) in July 2006 and a Migratory Bird Rule (http://www.dodpif.org/downloads/MigBirdFINALRule_FRFeb2007.pdf) was passed by Congress in February 2007. The Migratory Bird Rule addresses the potential impacts of military readiness activities on populations of migratory birds and establishes a process to implement conservation measures if and when a military readiness activity is expected to have a significant adverse impact on a population of migratory bird species (as determined through the NEPA process). The MOU states that for nonmilitary readiness activities, prior to initiating any activity likely to affect populations of migratory birds DoD shall (1) identify the migratory bird species likely to occur in the area of the proposed action and determine if any species of concern could be affected by the activity, and (2) assess and document, using NEPA when applicable, the effect of the proposed action on species of concern. By following these procedures, DoD will minimize the possibility for a proposed action to unintentionally take migratory birds at a level that would violate any of the migratory bird treaties and potentially impact mission activities. In addition, implementing conservation and monitoring programs for migratory birds supports the ecosystem integrity necessary to sustain DoD's natural resources for the military mission.Non-compliance with the procedural requirements of the MBTA could result in a private party lawsuit under the Administrative Procedures Act (APA). A lawsuit filed under APA involving a Navy bombing range is the basis for a court ruling that unintentional take of migratory birds applies to federal actions. Ensuring the necessary data is available to adequately assess impacts of a proposed action will help avoid lawsuits or help ensure such lawsuits have no grounds. The data gathered in a bird monitoring program will provide the best scientific data available to assess the expected impacts of a proposed action on migratory bird species through the NEPA process. This report presents recommendations developed by the U.S. Geological Survey (USGS) for the Department of Defense (DoD) on establishing a "Coordinated Bird Monitoring (CBM) Plan." The CBM Plan is intended to ensure that DoD meets its conservation and regulatory responsibilities for monitoring birds (Chapter 1). The report relies heavily on recommendations in the report, "Opportunities for improving avian monitoring" (http://www.nabci-us.org/aboutnabci/monitoringreportfinal0307.pdf), by the U.S. North American Bird Conservation Initiative (U.S. NABCI Monitoring Subcommittee, 2007) and on a review of 358 current DoD bird monitoring programs carried out as part of this project (Chapter 2). This report contains 12 recommendations which, if followed, would result in a comprehensive, efficient, and useful approach to bird monitoring. The recommendations are based on the entire report but are presented together at the end of Chapter 1. DoD has agreed to consider implementing these recommendations; however, final decisions will be based upon such factors as the availability of resources and military mission considerations. These recommendations from USGS can be summarized into 6 major themes: A major report on monitoring was released in 2007 by the U.S. North American Bird Conservation Initiative (http://www.nabci-us.org/main2.html). DoD can be consistent with this report by establishing policy that monitoring will be explicitly acknowledged as an integral element of bird management and conservation (Recommendation 1). The design of monitoring and assessment programs for birds should include the following steps: Preparation of a document describing the program's goals, objectives, and methods similar to a format we provide (Recommendation 2, Chapter 4). Selection of field methods using an "expert system" developed in this project (Recommendation 3, Chapter 5) or another well-documented system. Preparation and storage of metadata describing the monitoring program in the Natural Resources Monitoring Partnership (NRMP), and other appropriate databases Recommendation 4, Chapter 6). Entry of the survey data using eBird (http://ebird.org/content/dod) or the Coordinated Bird Monitoring Database (CBMD) and long-term storage of the data in the CBMD and the Avian Knowledge Network (AKN; Recommendation 5, Chapter 6; http://www.avianknowledge.net/). Submission of major results from the monitoring program for publication in a peer reviewed journal (Recommendation 6). The DoD Legacy Resource Management Program (Legacy; https://www.dodlegacy.org), Environmental Security Technology Certification Program (ESTCP; http://www.serdp.org/), and Strategic Environmental Research and Development Program (SERDP; http://www.serdp.org/) should be encouraged to continue their significant contributions to the foundations of bird monitoring (Recommendation 7, Chapters 1 and 3). Appropriate monitoring should be conducted to identify species of concern on installations. A year-round, one-time survey of birds on installations with habitat for migratory birds would provide the most information to assist compliance with the MOU, the Final Rule, and the NEPA analyses of proposed actions. However, less intensive survey efforts can still be conducted to yield useful information. We describe how various levels of survey effort might be organized and conducted. In addition, continuing surveys, as feasible, would further assist in documenting effects of military readiness and non-readiness activities on species of concern (SOC) (Recommendation 8, Chapter 7). Participation in well-designed, large-scale surveys [(e.g., North American Breeding Bird Survey (BBS; http://www.pwrc.usgs.gov/bbs/), Monitoring Avian Productivity and Survivorship (MAPS; http://www.birdpop.org/maps.htm)] on land that DoD manages or on lands where the results will be of high interest to DoD, will provide DoD and other NABCI members with information important to bird conservation (Recommendation 9, Chapter 8). Review and implementation of the CBM Plan should involve both higher level management and installation-level natural resources managers (Recommendation 11), be implemented through cooperative partnerships (Recommendation 12), and be followed on U.S territory lands and Army Corps of Engineers projects (Recommendation 10).Additional recommendations that pertain to implementing the DoD CBM Plan are discussed in Chapter 9.

Evaluating a surveillance system: live-bird market surveillance for highly pathogenic avian influenza, a case study.

PubMed

Waziri, Ndadilnasiya Endie; Nguku, Patrick; Olayinka, Adebola; Ajayi, Ike; Kabir, Junaidu; Okolocha, Emmanuel; Tseggai, Tesfai; Joannis, Tony; Okewole, Phillip; Kumbish, Peterside; Ahmed, Mohammed; Lombin, Lami; Nsubuga, Peter

2014-01-01

Highly pathogenic avian influenza H5N1 was first reported in poultry in Nigeria in February 2006. The only human case that occurred was linked to contact with poultry in a live bird market (LBM). LBM surveillance was instituted to assess the degree of threat of human exposure to H5N1. The key indicator was detection of H5N1 in LBMs. We evaluated the surveillance system to assess its operations and attributes. We used the US Centers for Disease Control and Prevention (CDC) updated guidelines for evaluating public health surveillance systems. We reviewed and analyzed passive surveillance data for HPAI (January 2006-March 2009) from the Avian Influenza National Reference Laboratory, and live bird market surveillance data from the Food and Agriculture Organization of the United Nations, Nigeria. We interviewed key stakeholders and reviewed reports of live bird market surveillance to obtain additional information on the operations of the system. We assessed the key system attributes. A total of 299 cases occurred in 25 (72%) states and the Federal Capital Territory (FCT). The system detected HPAI H5N1 virus in 7 (9.5%) LBMs; 2 (29%) of which were from 2 (18.2%) states with no previous case. A total of 17,852 (91.5%) of samples arrived at the laboratory within 24 hours but laboratory analysis took over 7 days. The sensitivity and positive predictive value (PPV) were 15.4% and 66.7% respectively. The system is useful, flexible, complex and not timely, but appears to be meeting its objectives. The isolation of HPAI H5N1 virus in some of these markets is an indication that the markets are possible reservoirs of the virus in Nigeria. We recommend that the Federal Government of Nigeria should dedicate more funds for surveillance for HPAI as this will aid early warning and reduce the risk of a pandemic.

Management and Research Applications of Long-range Surveillance Radar Data for Birds, Bats, and Flying Insects

USGS Publications Warehouse

Ruth, Janet M.; Buler, Jeffrey J.; Diehl, Robert H.; Sojda, Richard S.

2008-01-01

There is renewed interest in using long-range surveillance radar as a biological research tool due to substantial improvements in the network of radars within the United States. Technical improvements, the digital nature of the radar data, and the availability of computing power and geographic information systems, enable a broad range of biological applications. This publication provides a summary of long-range surveillance radar technology and applications of these data to questions about movement patterns of birds and other flying wildlife. The intended audience is potential radar-data end users, including natural-resource management and regulatory agencies, conservation organizations, and industry. This summary includes a definition of long-range surveillance radar, descriptions of its strengths and weaknesses, information on applications of the data, cost, methods of calibration, and what end users need to do, and some key references and resources.

Hierarchical models and Bayesian analysis of bird survey information

USGS Publications Warehouse

Sauer, J.R.; Link, W.A.; Royle, J. Andrew; Ralph, C. John; Rich, Terrell D.

2005-01-01

Summary of bird survey information is a critical component of conservation activities, but often our summaries rely on statistical methods that do not accommodate the limitations of the information. Prioritization of species requires ranking and analysis of species by magnitude of population trend, but often magnitude of trend is a misleading measure of actual decline when trend is poorly estimated. Aggregation of population information among regions is also complicated by varying quality of estimates among regions. Hierarchical models provide a reasonable means of accommodating concerns about aggregation and ranking of quantities of varying precision. In these models the need to consider multiple scales is accommodated by placing distributional assumptions on collections of parameters. For collections of species trends, this allows probability statements to be made about the collections of species-specific parameters, rather than about the estimates. We define and illustrate hierarchical models for two commonly encountered situations in bird conservation: (1) Estimating attributes of collections of species estimates, including ranking of trends, estimating number of species with increasing populations, and assessing population stability with regard to predefined trend magnitudes; and (2) estimation of regional population change, aggregating information from bird surveys over strata. User-friendly computer software makes hierarchical models readily accessible to scientists.

A cross-sectional study on biosecurity practices and communication networks of poultry exhibition in Australia.

PubMed

Hernández-Jover, Marta; Schemann, Kathrin; Toribio, Jenny-Ann L M L

2013-07-01

Poultry exhibitors are perceived to pose a biosecurity risk due to the high frequency of movements of birds and the close contact between birds at poultry shows. This cross-sectional study assessed the risks posed by poultry exhibitors in Australia using face-to-face interviews (n=46) at eight poultry shows and a postal survey. Univariable and multivariable logistic regression analyses were used to investigate associations between age, sex, location, number of birds, number of shows attended per year and distance travelled to a show, with biosecurity and communication practices. A total of 357 (29.1%) exhibitors responded to the postal survey. Among all participants (n=403), most had owned poultry for more than 15 years (71.9%), kept less than 200 birds (83.4%), mainly chicken (96.7%) and waterfowl (17.8%), and reported not having any commercial poultry operation within 5 km of their property (85.4%). Despite most exhibitors (90.8%) having at least some knowledge of biosecurity principles; some of their practices could pose a risk for disease introduction and spread. Most exhibitors kept their birds with outdoor access (87.0%) and 67.0% of exhibitors reported contact of wild birds with domestic birds being possible. Only 60% and 40.6% of exhibitors cleaned transport cages after each use and isolated birds for over two weeks, respectively, with men and exhibitors keeping more birds less likely (P=0.003) to conduct this practice. Most exhibitors (75.0%) attended more than 5 shows per year, travelling long distances (up to 1000 km) to attend a show. Although most exhibitors would source and sell their birds from and to other exhibitors and at poultry shows, some reported sourcing (15.2%) and selling (25.3%) their birds at live bird markets. In addition, contact with veterinarians was low (23.1%), with younger exhibitors and women more likely to contact a veterinarian than older exhibitors (P=0.006) and men (P=0.017). Other poultry exhibitors were reported as the most useful source of information, followed by the poultry club, the veterinarian and Internet. Less than a quarter of exhibitors perceived the government agencies as a useful source of information. Newspapers, newsletters, emails and websites were the preferred methods of information delivery. However, information seeking behaviour was found to differ significantly (P<0.05) among gender and different age groups. Differing biosecurity, health and communication practices among poultry exhibitors found in this study need to be considered for the development of successful biosecurity extension and communication programmes. Copyright © 2013 Elsevier B.V. All rights reserved.

Emission factors of greenhouse gases from layer and broiler barns in Cameroon

NASA Astrophysics Data System (ADS)

Ngwabie, N. Martin; Acobta, Ada N.; Manga, Veronica E.; VanderZaag, Andrew C.

2018-03-01

Limited information is available in the literature on greenhouse gas (GHG) quantification from livestock production systems in Africa. Therefore, this project was carried out to generate baseline emission factors of methane (CH4), nitrous oxide (N2O) and carbon dioxide (CO2) from broiler and layer barns with building design typical of Cameroon. Emissions were measured from two broiler barns during the entire production cycles and a layer barn for a limited period using flux chambers. Methane emission factors from the broiler barns with mud and cement floors were 0.96 ± 1.04 and 0.36 ± 0.17 mg bird-1 hr-1 respectively, and 0.76 ± 0.56 mg bird-1 hr-1 from the layer barn with cement floor. Nitrous oxide emission from the broiler barns with mud and cement floors were 12.94 ± 10.11 and 1.68 ± 1.02 mg bird-1 hr-1 respectively, and 0.21 ± 0.28 mg bird-1 hr-1 from the layer barn. Carbon dioxide emission factors from the broiler barns with mud and cement floors were 9327 ± 3508 and 25526 ± 6904 mg bird-1 hr-1 respectively, and 8942 ± 36756 mg bird-1 hr-1 from the layer barn. When scaled per livestock unit (LU), where 1 LU is 500 kg bird weight, CH4 emissions were 0.16 ± 0.17 and 0.06 ± 0.03 g LU-1 hr-1 from the broiler barns, and 0.19 ± 0.14 g LU-1 hr-1 from the layer barn. Nitrous oxide emissions were 2.16 ± 1.69 and 0.28 ± 0.17 g LU-1 hr-1 from the broiler barns, and 0.05 ± 0.07 g LU-1 hr-1 from the layer barn. Broilers reared in management systems with wood shavings on mud floor had relatively high CH4 and N2O emissions compared to broilers on wood shavings and cement floor, with the contrary observed for CO2. The emissions N2O were significantly higher from broiler barns compared to layer barns. Emissions were higher in the mornings compared to later periods of the day. Given the observed results, GHG emission mitigation strategies need to be customised for each building design and management system.

Passive unmanned sky spectroscopy for remote bird classification

NASA Astrophysics Data System (ADS)

Lundin, Patrik; Brydegaard, Mikkel; Cocola, Lorenzo; Runemark, Anna; Åkesson, Susanne; Svanberg, Sune

2011-11-01

We present a method based on passive spectroscopy with aim to remotely study flying birds. A compact spectrometer is continuously recording spectra of a small section of the sky, waiting for birds to obscure part of the field-of-view when they pass the field in flight. In such situations the total light intensity received through the telescope, looking straight up, will change very rapidly as compared to the otherwise slowly varying sky light. On passage of a bird, both the total intensity and the spectral shape of the captured light changes notably. A camera aimed in the same direction as the telescope, although with a wider field-of-view, is triggered by the sudden intensity changes in the spectrometer to record additional information, which may be used for studies of migration and orientation. Example results from a trial are presented and discussed. The study is meant to explore the information that could be gathered and extracted with the help of a spectrometer connected to a telescope. Information regarding the color, size and height of flying birds is discussed. Specifically, an application for passive distance determination utilizing the atmospheric oxygen A-band absorption at around 760 nm is discussed.

Campylobacter fetus subsp. jejuni in poultry reared under different management systems in Nigeria.

PubMed

Adekeye, J O; Abdu, P A; Bawa, E K

1989-01-01

Cloacal swabs from 487 live birds in 36 flocks and 70 poultry carcasses were cultured for Campylobacter fetus subsp. jejuni. It was isolated from 12.3% of the birds in 19 flocks. Chickens, turkeys, and guinea fowl differed from one another in isolation rates of the organism. Management system affected its occurrence, and only 7.1% of eviscerated carcasses yielded it. It was concluded that bird species, management system, and immersing slaughtered poultry in boiling water before dressing affect recovery of C. fetus subsp. jejuni from live birds and carcasses.

Is That Frog Legal?

ERIC Educational Resources Information Center

Sanchez, Ana Maria

1982-01-01

Outlines New York and federal laws governing the collection of natural materials (plants, animals, birds, reptiles, amphibians, insects, bird nests) for teaching purposes. Notes sources of helpful information and required permits. (MH)

Variation In Early-Successional Habitat Use Among Independent Juvenile Forest Breeding Birds

Treesearch

Alicia D. Burke; Frank R. Thompson; John Faaborg

2017-01-01

Adults and juveniles of some forest breeding birds shift habitat use during the post breeding season from late to early successional forest. Juveniles of smaller passerine species are difficult to radio-track, and there is limited information on their habitat preferences, especially once they become older and independent. We determined if independent hatch-year birds...

Analysis of droppings to describe diets of small birds

Treesearch

Carol Pearson Ralph; Stephanie E. Nagata; C. John Ralph

1985-01-01

Stomach contents have been the major source of dietary information for small birds and other vertebrates. However, killing specimens to look at stomach contents is not an option in studies of endangered species and often is undesirable in other studies. Emetics, causing regurgitation of stomach contents, can be used successfully with small birds, but can stress and...

77 FR 40374 - Proposed Information Collection; Depredation Orders for Double-Crested Cormorants

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-09

..., or barter, migratory birds or their parts, nests, or eggs, except as authorized by regulations... regulations implementing the Migratory Bird Treaty Act (MBTA) (16 U.S.C. 703 et seq.). Under the MBTA, it is... Services) in 13 States to take double-crested cormorants when the birds are found committing or about to...

77 FR 58443 - Migratory Bird Hunting; Final Frameworks for Late-Season Migratory Bird Hunting Regulations

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-20

... address above, or from the Division of Migratory Bird Management's Web site at http://www.fws.gov... INFORMATION CONTACT or from our Web site at http://www.fws.gov/migratorybirds . Review of Public Comments and... http://www.regulations.gov , or from our Web site at http://www.fws.gov/migratorybirds/NewReports...

Avian visual behavior and the organization of the telencephalon.

PubMed

Shimizu, Toru; Patton, Tadd B; Husband, Scott A

2010-01-01

Birds have excellent visual abilities that are comparable or superior to those of primates, but how the bird brain solves complex visual problems is poorly understood. More specifically, we lack knowledge about how such superb abilities are used in nature and how the brain, especially the telencephalon, is organized to process visual information. Here we review the results of several studies that examine the organization of the avian telencephalon and the relevance of visual abilities to avian social and reproductive behavior. Video playback and photographic stimuli show that birds can detect and evaluate subtle differences in local facial features of potential mates in a fashion similar to that of primates. These techniques have also revealed that birds do not attend well to global configural changes in the face, suggesting a fundamental difference between birds and primates in face perception. The telencephalon plays a major role in the visual and visuo-cognitive abilities of birds and primates, and anatomical data suggest that these animals may share similar organizational characteristics in the visual telencephalon. As is true in the primate cerebral cortex, different visual features are processed separately in the avian telencephalon where separate channels are organized in the anterior-posterior axis roughly parallel to the major laminae. Furthermore, the efferent projections from the primary visual telencephalon form an extensive column-like continuum involving the dorsolateral pallium and the lateral basal ganglia. Such a column-like organization may exist not only for vision, but for other sensory modalities and even for a continuum that links sensory and limbic areas of the avian brain. Behavioral and neural studies must be integrated in order to understand how birds have developed their amazing visual systems through 150 million years of evolution. 2010 S. Karger AG, Basel.

Avian Visual Behavior and the Organization of the Telencephalon

PubMed Central

Shimizu, Toru; Patton, Tadd B.; Husband, Scott A.

2010-01-01

Birds have excellent visual abilities that are comparable or superior to those of primates, but how the bird brain solves complex visual problems is poorly understood. More specifically, we lack knowledge about how such superb abilities are used in nature and how the brain, especially the telencephalon, is organized to process visual information. Here we review the results of several studies that examine the organization of the avian telencephalon and the relevance of visual abilities to avian social and reproductive behavior. Video playback and photographic stimuli show that birds can detect and evaluate subtle differences in local facial features of potential mates in a fashion similar to that of primates. These techniques have also revealed that birds do not attend well to global configural changes in the face, suggesting a fundamental difference between birds and primates in face perception. The telencephalon plays a major role in the visual and visuo-cognitive abilities of birds and primates, and anatomical data suggest that these animals may share similar organizational characteristics in the visual telencephalon. As is true in the primate cerebral cortex, different visual features are processed separately in the avian telencephalon where separate channels are organized in the anterior-posterior axis roughly parallel to the major laminae. Furthermore, the efferent projections from the primary visual telencephalon form an extensive column-like continuum involving the dorsolateral pallium and the lateral basal ganglia. Such a column-like organization may exist not only for vision, but for other sensory modalities and even for a continuum that links sensory and limbic areas of the avian brain. Behavioral and neural studies must be integrated in order to understand how birds have developed their amazing visual systems through 150 million years of evolution. PMID:20733296

Leg Disorders in Broiler Chickens: Prevalence, Risk Factors and Prevention

PubMed Central

Knowles, Toby G.; Kestin, Steve C.; Haslam, Susan M.; Brown, Steven N.; Green, Laura E.; Butterworth, Andrew; Pope, Stuart J.; Pfeiffer, Dirk; Nicol, Christine J.

2008-01-01

Broiler (meat) chickens have been subjected to intense genetic selection. In the past 50 years, broiler growth rates have increased by over 300% (from 25 g per day to 100 g per day). There is growing societal concern that many broiler chickens have impaired locomotion or are even unable to walk. Here we present the results of a comprehensive survey of commercial flocks which quantifies the risk factors for poor locomotion in broiler chickens. We assessed the walking ability of 51,000 birds, representing 4.8 million birds within 176 flocks. We also obtained information on approximately 150 different management factors associated with each flock. At a mean age of 40 days, over 27.6% of birds in our study showed poor locomotion and 3.3% were almost unable to walk. The high prevalence of poor locomotion occurred despite culling policies designed to remove severely lame birds from flocks. We show that the primary risk factors associated with impaired locomotion and poor leg health are those specifically associated with rate of growth. Factors significantly associated with high gait score included the age of the bird (older birds), visit (second visit to same flock), bird genotype, not feeding whole wheat, a shorter dark period during the day, higher stocking density at the time of assessment, no use of antibiotic, and the use of intact feed pellets. The welfare implications are profound. Worldwide approximately 2×1010 broilers are reared within similar husbandry systems. We identify a range of management factors that could be altered to reduce leg health problems, but implementation of these changes would be likely to reduce growth rate and production. A debate on the sustainability of current practice in the production of this important food source is required. PMID:18253493

Developing a general conceptual framework for avian conservation science

USGS Publications Warehouse

Sauer, J.R.

2003-01-01

Avian conservation science in North America has produced a variety of monitoring programs designed to provide information on population status of birds. Waterfowl surveys provide population estimates for breeding ducks over most of the continent, the North American Breeding Bird Survey (BBS) provides indexes to population change for >400 breeding bird species, and many other surveys exist that index bird populations at a variety of scales and seasons. However, many fundamental questions about bird population change remain unanswered. I suggest that analyses of monitoring data provide limited understanding of causes of population change, and that the declining species paradigm (Caughley 1994) is sometimes an inefficient approach to increasing our understanding of causes of population change. In North America, the North American Bird Conservation Initiative (NABCI) provides an opportunity to implement alternative approaches that use management, modeling of population responses to management, and monitoring in combination to increase our understanding of bird populations. In adaptive resources management, modeling provides predictions about consequences of management, and monitoring data allow us to assess the population consequences of management. In this framework, alternative hypotheses about response of populations to management can be evaluated by formulating a series of models with differing structure, and management and monitoring provide information about which model best predicts population response.

BIRD: Bio-Image Referral Database. Design and implementation of a new web based and patient multimedia data focused system for effective medical diagnosis and therapy.

PubMed

Pinciroli, Francesco; Masseroli, Marco; Acerbo, Livio A; Bonacina, Stefano; Ferrari, Roberto; Marchente, Mario

2004-01-01

This paper presents a low cost software platform prototype supporting health care personnel in retrieving patient referral multimedia data. These information are centralized in a server machine and structured by using a flexible eXtensible Markup Language (XML) Bio-Image Referral Database (BIRD). Data are distributed on demand to requesting client in an Intranet network and transformed via eXtensible Stylesheet Language (XSL) to be visualized in an uniform way on market browsers. The core server operation software has been developed in PHP Hypertext Preprocessor scripting language, which is very versatile and useful for crafting a dynamic Web environment.

Predatory birds and ants partition caterpillar prey by body size and diet breadth.

PubMed

Singer, Michael S; Clark, Robert E; Lichter-Marck, Issac H; Johnson, Emily R; Mooney, Kailen A

2017-10-01

The effects of predator assemblages on herbivores are predicted to depend critically on predator-predator interactions and the extent to which predators partition prey resources. The role of prey heterogeneity in generating such multiple predator effects has received limited attention. Vertebrate and arthropod insectivores constitute two co-dominant predatory taxa in many ecosystems, and the emergent properties of their joint effects on insect herbivores inform theory on multiple predator effects as well as biological control of insect herbivores. Here we use a large-scale factorial manipulation to assess the extent to which birds and ants engage in antagonistic predator-predator interactions and the consequences of heterogeneity in herbivore body size and diet breadth (i.e. the diversity of host plants used) for prey partitioning. We excluded birds and reduced ant density (by 60%) in the canopies of eight northeastern USA deciduous tree species during two consecutive years and measured the community composition and traits of lepidopteran larvae (caterpillars). Birds did not affect ant density, implying limited intraguild predation between these taxa in this system. Birds preyed selectively upon large-bodied caterpillars (reducing mean caterpillar length by 12%) and ants preyed selectively upon small-bodied caterpillars (increasing mean caterpillar length by 6%). Birds and ants also partitioned caterpillar prey by diet breadth. Birds reduced the frequency dietary generalist caterpillars by 24%, while ants had no effect. In contrast, ants reduced the frequency of dietary specialists by 20%, while birds had no effect, but these effects were non-additive; under bird exclusion, ants had no detectable effect, while in the presence of birds, they reduced the frequency of specialists by 40%. As a likely result of prey partitioning by body size and diet breadth, the combined effects of birds and ants on total caterpillar density were additive, with birds and ants reducing caterpillar density by 44% and 20% respectively. These results show evidence for the role of prey heterogeneity in driving functional complementarity among predators and enhanced top-down control. Heterogeneity in herbivore body size and diet breadth, as well as other prey traits, may represent key predictors of the strength of top-down control from predator communities. © 2017 The Authors. Journal of Animal Ecology © 2017 British Ecological Society.

Bird Vision System

NASA Technical Reports Server (NTRS)

2008-01-01

The Bird Vision system is a multicamera photogrammerty software application that runs on a Microsoft Windows XP platform and was developed at Kennedy Space Center by ASRC Aerospace. This software system collects data about the locations of birds within a volume centered on the Space Shuttle and transmits it in real time to the laptop computer of a test director in the Launch Control Center (LCC) Firing Room.

Biosecurity and bird movement practices in upland game bird facilities in the United States.

PubMed

Slota, Katharine E; Hill, Ashley E; Keefe, Thomas J; Bowen, Richard A; Pabilonia, Kristy L

2011-06-01

Since 1996, the emergence of Asian-origin highly pathogenic avian influenza subtype H5N1 has spurred great concern for the global poultry industry. In the United States, there is concern over the potential of a foreign avian disease incursion into the country. Noncommercial poultry operations, such as upland game bird facilities in the United States, may serve as a potential source of avian disease introduction to other bird populations including the commercial poultry industry, backyard flocks, or wildlife. In order to evaluate how to prevent disease transmission from these facilities to other populations, we examined biosecurity practices and bird movement within the upland game bird industry in the United States. Persons that held a current permit to keep, breed, or release upland game birds were surveyed for information on biosecurity practices, flock and release environments, and bird movement parameters. Biosecurity practices vary greatly among permit holders. Many facilities allow for interaction between wild birds and pen-reared birds, and there is regular long-distance movement of live adult birds among facilities. Results suggest that upland game bird facilities should be targeted for biosecurity education and disease surveillance efforts.

Use of wild bird surveillance, human case data and GIS spatial analysis for predicting spatial distributions of West Nile virus in Greece.

PubMed

Valiakos, George; Papaspyropoulos, Konstantinos; Giannakopoulos, Alexios; Birtsas, Periklis; Tsiodras, Sotirios; Hutchings, Michael R; Spyrou, Vassiliki; Pervanidou, Danai; Athanasiou, Labrini V; Papadopoulos, Nikolaos; Tsokana, Constantina; Baka, Agoritsa; Manolakou, Katerina; Chatzopoulos, Dimitrios; Artois, Marc; Yon, Lisa; Hannant, Duncan; Petrovska, Liljana; Hadjichristodoulou, Christos; Billinis, Charalambos

2014-01-01

West Nile Virus (WNV) is the causative agent of a vector-borne, zoonotic disease with a worldwide distribution. Recent expansion and introduction of WNV into new areas, including southern Europe, has been associated with severe disease in humans and equids, and has increased concerns regarding the need to prevent and control future WNV outbreaks. Since 2010, 524 confirmed human cases of the disease have been reported in Greece with greater than 10% mortality. Infected mosquitoes, wild birds, equids, and chickens have been detected and associated with human disease. The aim of our study was to establish a monitoring system with wild birds and reported human cases data using Geographical Information System (GIS). Potential distribution of WNV was modelled by combining wild bird serological surveillance data with environmental factors (e.g. elevation, slope, land use, vegetation density, temperature, precipitation indices, and population density). Local factors including areas of low altitude and proximity to water were important predictors of appearance of both human and wild bird cases (Odds Ratio = 1,001 95%CI = 0,723-1,386). Using GIS analysis, the identified risk factors were applied across Greece identifying the northern part of Greece (Macedonia, Thrace) western Greece and a number of Greek islands as being at highest risk of future outbreaks. The results of the analysis were evaluated and confirmed using the 161 reported human cases of the 2012 outbreak predicting correctly (Odds = 130/31 = 4,194 95%CI = 2,841-6,189) and more areas were identified for potential dispersion in the following years. Our approach verified that WNV risk can be modelled in a fast cost-effective way indicating high risk areas where prevention measures should be implemented in order to reduce the disease incidence.

A new specimen of the Early Cretaceous bird Hongshanornis longicresta: insights into the aerodynamics and diet of a basal ornithuromorph.

PubMed

Chiappe, Luis M; Zhao, Bo; O'Connor, Jingmai K; Chunling, Gao; Wang, Xuri; Habib, Michael; Marugan-Lobon, Jesus; Meng, Qingjin; Cheng, Xiaodong

2014-01-01

The discovery of Hongshanornis longicresta, a small ornithuromorph bird with unusually long hindlimb proportions, was followed by the discovery of two closely related species, Longicrusavis houi and Parahongshanornis chaoyangensis. Together forming the Hongshanornithidae, these species reveal important information about the early diversity and morphological specialization of ornithuromorphs, the clade that contains all living birds. Here we report on a new specimen (DNHM D2945/6) referable to Hongshanornis longicresta that contributes significant information to better understand the morphology, trophic ecology, and aerodynamics of this species, as well as the taxonomy of the Hongshanornithidae. Most notable are the well-preserved wings and feathered tail of DNHM D2945/6, which afford an accurate reconstruction of aerodynamic parameters indicating that as early as 125 million years ago, basal ornithuromorphs had evolved aerodynamic surfaces comparable in size and design to those of many modern birds, and flight modes alike to those of some small living birds.

A new specimen of the Early Cretaceous bird Hongshanornis longicresta: insights into the aerodynamics and diet of a basal ornithuromorph

PubMed Central

Zhao, Bo; O’Connor, Jingmai K.; Chunling, Gao; Wang, Xuri; Habib, Michael; Marugan-Lobon, Jesus; Meng, Qingjin; Cheng, Xiaodong

2014-01-01

The discovery of Hongshanornis longicresta, a small ornithuromorph bird with unusually long hindlimb proportions, was followed by the discovery of two closely related species, Longicrusavis houi and Parahongshanornis chaoyangensis. Together forming the Hongshanornithidae, these species reveal important information about the early diversity and morphological specialization of ornithuromorphs, the clade that contains all living birds. Here we report on a new specimen (DNHM D2945/6) referable to Hongshanornis longicresta that contributes significant information to better understand the morphology, trophic ecology, and aerodynamics of this species, as well as the taxonomy of the Hongshanornithidae. Most notable are the well-preserved wings and feathered tail of DNHM D2945/6, which afford an accurate reconstruction of aerodynamic parameters indicating that as early as 125 million years ago, basal ornithuromorphs had evolved aerodynamic surfaces comparable in size and design to those of many modern birds, and flight modes alike to those of some small living birds. PMID:24482756

Semiochemical compounds of preen secretion reflect genetic make-up in a seabird species

USGS Publications Warehouse

Leclaire, S.; Merkling, T.; Raynaud, C.; Mulard, Hervé; Bessiere, J.-M.; Lhuillier, E.M.; Hatch, Shyla A.; Danchin, E.

2012-01-01

Several vertebrates choose their mate according to genetic heterozygosity and relatedness, and use odour cues to assess their conspecifics' genetic make-up. In birds, although several species (including the blacklegged kittiwake) exhibit non-random mating according to genetic traits, the cues used to assess genetic characteristics remain unknown. The importance of olfaction in birds' social behaviour is gaining attention among researchers, and it has been suggested that, as in other vertebrates, bird body scent may convey information about genetic traits. Here, we combined gas chromatography data and genetic analyses at microsatellite loci to test whether semiochemical messages in preen secretion of kittiwakes carried information about genetic heterozygosity and relatedness. Semiochemical profile was correlated with heterozygosity in males and females, while semiochemical distance was correlated with genetic distance only in male-male dyads. Our study is the first to demonstrate a link between odour and genetics in birds, which sets the stage for the existence of sophisticated odour-based mechanisms of mate choice also in birds. ?? 2011 The Royal Society.

Silvicultural options for neotropical migratory birds

Treesearch

Frank R. Thompson; John R. Probst; Martin G. Raphael

1993-01-01

We review: factors that affect forest bird populations; basic concepts of silvicultural systems; potential impacts of these systems on neotropical migratory birds (NTMBs); and conclude with management recommendations for integrating NTMB conservation with forest management. We approach this topic from a regional-landscape scale to a forest stand-habitat scale, rather...

Comparing determinants of alien bird impacts across two continents: implications for risk assessment and management

PubMed Central

Evans, Thomas; Kumschick, Sabrina; Dyer, Ellie; Blackburn, Tim

2014-01-01

Invasive alien species can have serious adverse impacts on both the environment and the economy. Being able to predict the impacts of an alien species could assist in preventing or reducing these impacts. This study aimed to establish whether there are any life history traits consistently correlated with the impacts of alien birds across two continents, Europe and Australia, as a first step toward identifying life history traits that may have the potential to be adopted as predictors of alien bird impacts. A recently established impact scoring system was used in combination with a literature review to allocate impact scores to alien bird species with self-sustaining populations in Australia. These scores were then tested for correlation with a series of life history traits. The results were compared to data from a previous study in Europe, undertaken using the same methodology, in order to establish whether there are any life history traits consistently correlated with impact across both continents. Habitat generalism was the only life history trait found to be consistently correlated with impact in both Europe and Australia. This trait shows promise as a potential predictor of alien bird impacts. The results support the findings of previous studies in this field, and could be used to inform decisions regarding the prevention and management of future invasions. PMID:25165531

Comparing determinants of alien bird impacts across two continents: implications for risk assessment and management.

PubMed

Evans, Thomas; Kumschick, Sabrina; Dyer, Ellie; Blackburn, Tim

2014-07-01

Invasive alien species can have serious adverse impacts on both the environment and the economy. Being able to predict the impacts of an alien species could assist in preventing or reducing these impacts. This study aimed to establish whether there are any life history traits consistently correlated with the impacts of alien birds across two continents, Europe and Australia, as a first step toward identifying life history traits that may have the potential to be adopted as predictors of alien bird impacts. A recently established impact scoring system was used in combination with a literature review to allocate impact scores to alien bird species with self-sustaining populations in Australia. These scores were then tested for correlation with a series of life history traits. The results were compared to data from a previous study in Europe, undertaken using the same methodology, in order to establish whether there are any life history traits consistently correlated with impact across both continents. Habitat generalism was the only life history trait found to be consistently correlated with impact in both Europe and Australia. This trait shows promise as a potential predictor of alien bird impacts. The results support the findings of previous studies in this field, and could be used to inform decisions regarding the prevention and management of future invasions.

77 FR 3490 - Information Collection Request Sent to the Office of Management and Budget (OMB) for Approval...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-24

...] Information Collection Request Sent to the Office of Management and Budget (OMB) for Approval; Mourning Dove...: Mourning Dove Call Count Survey. Service Form Number(s): 3-159. Type of Request: Extension of currently... migratory bird populations. The Mourning Dove Call Count Survey is an essential part of the migratory bird...

77 FR 50981 - Notice of Request for Extension of Approval of an Information Collection; Importation of Swine...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-23

...] Notice of Request for Extension of Approval of an Information Collection; Importation of Swine Hides... of swine hides, bird trophies, and deer hides. DATES: We will consider all comments that we receive... for the importation of swine hides, bird trophies, and deer hides, contact Dr. Tracye Butler...

Epidemiologic characterization of Colorado backyard bird flocks.

PubMed

Smith, Emily I; Reif, John S; Hill, Ashley E; Slota, Katharine E; Miller, Ryan S; Bjork, Kathe E; Pabilonia, Kristy L

2012-06-01

Backyard gallinaceous bird flocks may play an important role in the spread of infectious diseases within poultry populations as well as the transmission of zoonotic diseases to humans. An epidemiologic characterization was conducted of Colorado backyard flocks to gather information on general flock characteristics, human movement of birds, human-bird interaction, biosecurity practices, and flock health. Our results suggest that backyard poultry flocks in Colorado are small-sized flocks (68.6% of flocks had < 50 birds); consist primarily of layer chickens (85.49% of flocks), show chickens (32.18% of flocks), and waterfowl (34.07% of flocks); and are primarily owned for food (meat or egg) production for the family (86.44%) or as pet or hobby birds (42.27%). The backyard flock environment may promote bird-to-bird transmission as well as bird-to-human transmission of infectious disease. Birds are primarily housed with free access to the outside (96.85%), and many are moved from the home premises (46.06% within 1 yr). Human contact with backyard flocks is high, biosecurity practices are minimal, and bird health is negatively impacted by increased movement events. Increased knowledge of backyard bird characteristics and associated management practices can provide guidelines for the development of measures to decrease disease transmission between bird populations, decrease disease transmission from birds to humans, and increase the overall health of backyard birds.

Functional traits determine heterospecific use of risk-related social information in forest birds of tropical South-East Asia.

PubMed

Hua, Fangyuan; Yong, Ding Li; Janra, Muhammad Nazri; Fitri, Liza M; Prawiradilaga, Dewi; Sieving, Kathryn E

2016-12-01

In birds and mammals, mobbing calls constitute an important form of social information that can attract numerous sympatric species to localized mobbing aggregations. While such a response is thought to reduce the future predation risk for responding species, there is surprisingly little empirical evidence to support this hypothesis. One way to test the link between predation risk reduction and mobbing attraction involves testing the relationship between species' attraction to mobbing calls and the functional traits that define their vulnerability to predation risk. Two important traits known to influence prey vulnerability include relative prey-to-predator body size ratio and the overlap in space use between predator and prey; in combination, these measures strongly influence prey accessibility, and therefore their vulnerability, to predators. Here, we combine community surveys with behavioral experiments of a diverse bird assemblage in the lowland rainforest of Sumatra to test whether the functional traits of body mass (representing body size) and foraging height (representing space use) can predict species' attraction to heterospecific mobbing calls. At four forest sites along a gradient of forest degradation, we characterized the resident bird communities using point count and mist-netting surveys, and determined the species groups attracted to standardized playbacks of mobbing calls produced by five resident bird species of roughly similar body size and foraging height. We found that (1) a large, diverse subcommunity of bird species was attracted to the mobbing calls and (2) responding species (especially the most vigorous respondents) tended to be (a) small (b) mid-storey foragers (c) with similar trait values as the species producing the mobbing calls. Our findings from the relatively lesser known bird assemblages of tropical Asia add to the growing evidence for the ubiquity of heterospecific information networks in animal communities, and provide empirical support for the long-standing hypothesis that predation risk reduction is a major benefit of mobbing information networks.

Predicting the Effects of Ecosystem Management Harvesting Treatments on Breeding Birds in Pine-Hardwood Forests

Treesearch

Lisa J. Petit; Daniel R. Petit; Thomas E. Martin

1993-01-01

Habitat relationships of birds are well known compared to those of other taxa. However, a major obstacle to developing rigorous management plans for birds is the collation and transfer of information from widely scattered technical and academic publications to a form that can be applied directly to the management of species. Recognizing this dilemma, Hamel (1992)...

Nest-site habitat of cavity-nesting birds at the San Joaquin Experimental Range

Treesearch

Kathryn L. Purcell; Jared. Verner

2008-01-01

Detailed information about the nesting habitats of birds, including those needed for successful nesting, can provide a better understanding of the ecological factors that permit coexistence of different species and may aid in conservation efforts. From 1989 through 1994, we studied the nesting habitat of secondary cavity-nesting birds in oak woodlands at the San...

Can snag creation benefit a primary cavity nester: response to an experimental pulse in snag abundance

Treesearch

John Kilgo; Mark Vukovich

2014-01-01

Thresholds in response by cavity-nesting bird populations to variations in the snag resource are poorly understood. In addition, limited information exists on the value of artificially created snags for cavity-nesting birds. Therefore, uncertainty exists in whether artificially created snags can yield a positive population response among snag-dependent birds. We used...

Seasonal diets of insectivorous birds using canopy gaps in a bottomland forest

Treesearch

Christopher E. Moorman; Liessa T. Bowen; John C. Kilgo; Clyde E. Sorenson; James L. Hanula; Scott Horn; Mike D. Ulyshen

2007-01-01

Little is known about how insectivorous bird diets are influenced by arthropod availability and about how these relationships vary seasonally. We captured birds in forest-canopy gaps and adjacent mature forest during 2001 and 2002 at the Savannah River Site in Barnwell County, South Carolina, and flushed their crops to gather information about arthropods eaten during...

Assessing potential exposure of birds to pesticide-treated seeds.

PubMed

Prosser, Phil; Hart, A D M

2005-10-01

Seed treatments are widely used for crop protection and present a particular risk to granivorous birds. UK risk assessment for seed treatments has tended to focus on highly granivorous species; however, under some conditions, non-granivorous birds will take seeds. Better data is needed on which species eat seeds for which pesticide treatments are used. To identify which species will take and eat a range of crop seeds in common usage in the UK, birds visiting bait stations at which untreated seed was presented were video recorded. Information was also obtained on how much seed is taken by individual birds. The seeds tested were wheat, barley, maize, oilseed rape, grass, peas and pelleted sugar beet. For many of the species observed at the bait stations, the amounts of seed consumed during single visits were sufficient to pose a potential risk (toxicity-exposure ratio < 10) if the seed had been treated with one of the more acutely toxic seed treatments. Previous studies have shown that de-husking of seeds can substantially reduce birds' exposure. This paper provides information on which of the species recorded de-husked which seeds, in field conditions. The use of these data in pesticide risk assessment is considered.

Autonomous Formation Flight

NASA Technical Reports Server (NTRS)

Schkolnik, Gerard S.; Cobleigh, Brent

2004-01-01

NASA's Strategic Plan for the Aerospace Technology Enterprise includes ambitious objectives focused on affordable air travel, reduced emissions, and expanded aviation-system capacity. NASA Dryden Flight Research Center, in cooperation with NASA Ames Research Center, the Boeing Company, and the University of California, Los Angeles, has embarked on an autonomous-formation-flight project that promises to make significant strides towards these goals. For millions of years, birds have taken advantage of the aerodynamic benefit of flying in formation. The traditional "V" formation flown by many species of birds (including gulls, pelicans, and geese) enables each of the trailing birds to fly in the upwash flow field that exists just outboard of the bird immediately ahead in the formation. The result for each trailing bird is a decrease in induced drag and thus a reduction in the energy needed to maintain a given speed. Hence, for migratory birds, formation flight extends the range of the system of birds over the range of birds flying solo. The Autonomous Formation Flight (AFF) Project is seeking to extend this symbiotic relationship to aircraft.

Hampered foraging and migratory performance in swans infected with low-pathogenic avian influenza A virus.

PubMed

van Gils, Jan A; Munster, Vincent J; Radersma, Reinder; Liefhebber, Daan; Fouchier, Ron A M; Klaassen, Marcel

2007-01-31

It is increasingly acknowledged that migratory birds, notably waterfowl, play a critical role in the maintenance and spread of influenza A viruses. In order to elucidate the epidemiology of influenza A viruses in their natural hosts, a better understanding of the pathological effects in these hosts is required. Here we report on the feeding and migratory performance of wild migratory Bewick's swans (Cygnus columbianus bewickii Yarrell) naturally infected with low-pathogenic avian influenza (LPAI) A viruses of subtypes H6N2 and H6N8. Using information on geolocation data collected from Global Positioning Systems fitted to neck-collars, we show that infected swans experienced delayed migration, leaving their wintering site more than a month after uninfected animals. This was correlated with infected birds travelling shorter distances and fuelling and feeding at reduced rates. The data suggest that LPAI virus infections in wild migratory birds may have higher clinical and ecological impacts than previously recognised.

Role of Brazilian zoos in ex situ bird conservation: from 1981 to 2005.

PubMed

Azevedo, Cristiano S; Young, Robert J; Rodrigues, Marcos

2011-01-01

Zoos may play an important role in conservation when they maintain and breed large numbers of animals that are threatened with extinction. Bird conservation is in a privileged situation owing to the extensive biological information available about this class. Annual inventories produced by the "Sociedade de Zoológicos do Brasil" in the years 1981, 1990, 2000, and 2005 were analyzed. Variables, such as the number of zoos per geographic region; number of birds held; number of bird species in each IUCN threat category; number of exotic and native bird species; number of potentially breeding bird species; number of bird species in each order; and number of threatened bird species breeding, were analyzed. Brazilian zoos kept more than 350 bird species. The number of bird species and specimens held by the Brazilian Zoos increased from 1981 to 2000, but decreased in 2005. The same pattern was observed for the number of species in each IUCN threat category. Results showed that the potential of the Brazilian zoos in bird conservation needs to be enhanced because they maintain threatened species but do not implement systematic genetic, reproductive, or behavioral management protocols for most species. © 2010 Wiley Periodicals, Inc.

Tick-borne pathogens in ticks collected from birds in Taiwan.

PubMed

Kuo, Chi-Chien; Lin, Yi-Fu; Yao, Cheng-Te; Shih, Han-Chun; Chung, Lo-Hsuan; Liao, Hsien-Chun; Hsu, Yu-Cheng; Wang, Hsi-Chieh

2017-11-25

A variety of human diseases transmitted by arthropod vectors, including ticks, are emerging around the globe. Birds are known to be hosts of ticks and can disperse exotic ticks and tick-borne pathogens. In Taiwan, previous studies have focused predominantly on mammals, leaving the role of birds in the maintenance of ticks and dissemination of tick-borne pathogens undetermined. Ticks were collected opportunistically when birds were studied from 1995 to 2013. Furthermore, to improve knowledge on the prevalence and mean load of tick infestation on birds in Taiwan, ticks were thoroughly searched for when birds were mist-netted at seven sites between September 2014 and April 2016 in eastern Taiwan. Ticks were identified based on both morphological and molecular information and were screened for potential tick-borne pathogens, including the genera Anaplasma, Babesia, Borrelia, Ehrlichia and Rickettsia. Finally, a list of hard tick species collected from birds in Taiwan was compiled based on past work and the current study. Nineteen ticks (all larvae) were recovered from four of the 3096 unique mist-netted bird individuals, yielding a mean load of 0.006 ticks/individual and an overall prevalence of 0.13%. A total of 139 ticks from birds, comprising 48 larvae, 35 nymphs, 55 adults and one individual of unknown life stage, were collected from 1995 to 2016, and 11 species of four genera were identified, including three newly recorded species (Haemaphysalis wellingtoni, Ixodes columnae and Ixodes turdus). A total of eight tick-borne pathogens were detected, with five species (Borrelia turdi, Anaplasma sp. clone BJ01, Ehrlichia sp. BL157-9, Rickettsia helvetica and Rickettsia monacensis) not previously isolated in Taiwan. Overall, 16 tick species of five genera have been recorded feeding on birds, including nine species first discovered in this study. Our study demonstrates the paucity of information on ticks of birds and emphasizes the need for more research on ticks of birds in Taiwan and Southeast Asia. Moreover, some newly recorded ticks and tick-borne pathogens were found only on migratory birds, demonstrating the necessity of further surveillance on these highly mobile species.

Birds Kept as Pets

MedlinePlus

... and Animal Product Import Information U.S. Department of Agriculture, Animal and Plant Health Inspection Service (USDA/APHIS) Non-U.S. Origin Pet Birds U.S. Department of Agriculture, Animal and Plant Health Inspection Service (USDA/APHIS) ...

Avian Influenza (Bird Flu)

MedlinePlus

... Spread Bird Flu to People Interim Guidance on Testing Pandemic Flu Key Information Prevention & Treatment Influenza A Type Viruses & Subtypes Transmission of Avian Influenza A Viruses Between Animals and People Related Links Research Glossary of Influenza ( ...

Early life adversity increases foraging and information gathering in European starlings, Sturnus vulgaris

PubMed Central

Andrews, Clare; Viviani, Jérémie; Egan, Emily; Bedford, Thomas; Brilot, Ben; Nettle, Daniel; Bateson, Melissa

2015-01-01

Animals can insure themselves against the risk of starvation associated with unpredictable food availability by storing energy reserves or gathering information about alternative food sources. The former strategy carries costs in terms of mass-dependent predation risk, while the latter trades off against foraging for food; both trade-offs may be influenced by an individual's developmental history. Here, we consider a possible role of early developmental experience in inducing different mass regulation and foraging strategies in European starlings. We measured the body mass, body condition, foraging effort, food consumption and contrafreeloading (foraging for food hidden in sand when equivalent food is freely available) of adult birds (≥10 months old) that had previously undergone a subtle early life manipulation of food competition (cross-fostering into the highest or lowest ranks in the brood size hierarchy when 2–12 days of age). We found that developmentally disadvantaged birds were fatter in adulthood and differed in foraging behaviour compared with their advantaged siblings. Disadvantaged birds were hyperphagic compared with advantaged birds, but only following a period of food deprivation, and also spent more time contrafreeloading. Advantaged birds experienced a trade-off between foraging success and time spent contrafreeloading, whereas disadvantaged birds faced no such trade-off, owing to their greater foraging efficiency. Thus, developmentally disadvantaged birds appeared to retain a phenotypic memory of increased nestling food competition, employing both energy storage and information-gathering insurance strategies to a greater extent than their advantaged siblings. Our results suggest that subtle early life disadvantage in the form of psychosocial stress and/or food insecurity can leave a lasting legacy on foraging behaviour and mass regulation even in the absence of food insufficiency during development or adulthood. PMID:26566292

Statistical approaches to the analysis of point count data: A little extra information can go a long way

USGS Publications Warehouse

Farnsworth, G.L.; Nichols, J.D.; Sauer, J.R.; Fancy, S.G.; Pollock, K.H.; Shriner, S.A.; Simons, T.R.; Ralph, C. John; Rich, Terrell D.

2005-01-01

Point counts are a standard sampling procedure for many bird species, but lingering concerns still exist about the quality of information produced from the method. It is well known that variation in observer ability and environmental conditions can influence the detection probability of birds in point counts, but many biologists have been reluctant to abandon point counts in favor of more intensive approaches to counting. However, over the past few years a variety of statistical and methodological developments have begun to provide practical ways of overcoming some of the problems with point counts. We describe some of these approaches, and show how they can be integrated into standard point count protocols to greatly enhance the quality of the information. Several tools now exist for estimation of detection probability of birds during counts, including distance sampling, double observer methods, time-depletion (removal) methods, and hybrid methods that combine these approaches. Many counts are conducted in habitats that make auditory detection of birds much more likely than visual detection. As a framework for understanding detection probability during such counts, we propose separating two components of the probability a bird is detected during a count into (1) the probability a bird vocalizes during the count and (2) the probability this vocalization is detected by an observer. In addition, we propose that some measure of the area sampled during a count is necessary for valid inferences about bird populations. This can be done by employing fixed-radius counts or more sophisticated distance-sampling models. We recommend any studies employing point counts be designed to estimate detection probability and to include a measure of the area sampled.

Avian use of introduced plants: ornithologist records illuminate interspecific associations and research needs.

PubMed

Aslan, Clare E; Rejmánek, Marcel

2010-06-01

Introduced species have the potential to impact processes central to the organization of ecological communities. Although hundreds of nonnative plant species have naturalized in the United States, only a small percentage of these have been studied in their new biotic communities. Their interactions with resident (native and introduced) bird species remain largely unexplored. As a group, citizen scientists such as ornithologists possess a wide range of experiences. They may offer insights into the prevalence and form of bird interactions with nonnative plants on a broad geographic scale. We surveyed 173 ornithologists from four U.S. states, asking them to report observations of bird interactions with nonnative plants. The primary goal of the survey was to obtain information useful in guiding future empirical research. In all, 1143 unique bird-plant interactions were reported, involving 99 plant taxa and 168 bird species. Forty-seven percent of reported interactions concerned potential dispersal (feeding on seeds or fruits). Remaining "habitat interactions" involved bird use of plants for nesting, perching, woodpecking, gleaning, and other activities. We utilized detrended correspondence analysis to ordinate birds with respect to the plants they reportedly utilize. Results illuminate the new guilds formed by these interactions. We assessed the existing level of knowledge about invasiveness of those plants reported most often in feeding interactions, identifying information gaps for biological invasions research priority. To exemplify the usefulness of citizen science data, we utilized survey results to guide field research on invasiveness in some of these plant species and observed both qualitatively and quantitatively strong agreement between survey reports and our empirical data. Questionnaire reports are therefore heuristically informative for the fields of both avian ecology and invasion biology.

Birds of Antioquia: Georeferenced database of specimens from the Colección de Ciencias Naturales del Museo Universitario de la Universidad de Antioquia (MUA).

PubMed

Rozo, Andrea Morales; Valencia, Fernando; Acosta, Alexis; Parra, Juan Luis

2014-01-01

The department of Antioquia, Colombia, lies in the northwestern corner of South America and provides a biogeographical link among divergent faunas, including Caribbean, Andean, Pacific and Amazonian. Information about the distribution of biodiversity in this area is of relevance for academic, practical and social purposes. This data paper describes the dataset containing all bird specimens deposited in the Colección de Ciencias Naturales del Museo Universitario de la Universidad de Antioquia (MUA). We curated all the information associated with the bird specimens, including the georeferences and taxonomy, and published the database through the Global Biodiversity Information Facility network. During this process we checked the species identification and existing georeferences and completed the information when possible. The collection holds 663 bird specimens collected between 1940 and 2011. Even though most specimens are from Antioquia (70%), the collection includes material from several other departments and one specimen from the United States. The collection holds specimens from three endemic and endangered species (Coeligena orina, Diglossa gloriossisima, and Hypopirrhus pyrohipogaster), and includes localities poorly represented in other collections. The information contained in the collection has been used for biodiversity modeling, conservation planning and management, and we expect to further facilitate these activities by making it publicly available.

Lab-on-a-bird: biophysical monitoring of flying birds.

PubMed

Gumus, Abdurrahman; Lee, Seoho; Ahsan, Syed S; Karlsson, Kolbeinn; Gabrielson, Richard; Guglielmo, Christopher G; Winkler, David W; Erickson, David

2015-01-01

The metabolism of birds is finely tuned to their activities and environments, and thus research on avian systems can play an important role in understanding organismal responses to environmental changes. At present, however, the physiological monitoring of bird metabolism is limited by the inability to take real-time measurements of key metabolites during flight. In this study, we present an implantable biosensor system that can be used for continuous monitoring of uric acid levels of birds during various activities including flight. The system consists of a needle-type enzymatic biosensor for the amperometric detection of uric acid in interstitial fluids. A lightweight two-electrode potentiostat system drives the biosensor, reads the corresponding output current and wirelessly transfers the data or records to flash memory. We show how the device can be used to monitor, in real time, the effects of short-term flight and rest cycles on the uric acid levels of pigeons. In addition, we demonstrate that our device has the ability to measure uric acid level increase in homing pigeons while they fly freely. Successful application of the sensor in migratory birds could open up a new way of studying birds in flight which would lead to a better understanding of the ecology and biology of avian movements.

Assessment of Methods for Estimating Risk to Birds from ...

EPA Pesticide Factsheets

The U.S. EPA Ecological Risk Assessment Support Center (ERASC) announced the release of the final report entitled, Assessment of Methods for Estimating Risk to Birds from Ingestion of Contaminated Grit Particles. This report evaluates approaches for estimating the probability of ingestion by birds of contaminated particles such as pesticide granules or lead particles (i.e. shot or bullet fragments). In addition, it presents an approach for using this information to estimate the risk of mortality to birds from ingestion of lead particles. Response to ERASC Request #16

Proceedings of the Workshop Management of Southern Forests for NongameBirds

Treesearch

Richard M. DeGraaf; [Technical Coordinator

1978-01-01

This symposium was held to familiarize land managers in the South with the latest research information useful in management of nongame birds on forested lands.Fourteen papers are reproduced in the Proceedings.

Tree stocking affects winter bird densities across a gradient of savanna, woodland, and forest in the Missouri Ozarks

Treesearch

Sarah W. Kendrick; Frank R., III Thompson

2013-01-01

Savanna and woodland were historically prevalent in the midwestern United States, and managers throughout the area are currently attempting to restore these communities. Better knowledge of the responses of breeding and non-breeding birds to savanna and woodland restoration is needed to inform management.We surveyed abundance of winter resident birds across a gradient...

Post-fledging survival in passerine birds and the value of post-fledging studies to conservation

Treesearch

W. Andrew Cox; Frank R. III Thompson; Allison S. Cox; John Faaborg

2014-01-01

Conservation efforts are most effective when we have complete demographic information for a species of concern. Nevertheless, fundamental gaps in our knowledge of demography still exist for many taxa. For passerine birds, the period of time directly after young birds leave the nest and before they disperse and/or migrate (i.e., the post-fledging period) remains an...

Varying expectancies and attention bias in phobic and non-phobic individuals

PubMed Central

Aue, Tatjana; Guex, Raphaël; Chauvigné, Léa A. S.; Okon-Singer, Hadas

2013-01-01

Phobic individuals display an attention bias to phobia-related information and biased expectancies regarding the likelihood of being faced with such stimuli. Notably, although attention and expectancy biases are core features in phobia and anxiety disorders, these biases have mostly been investigated separately and their causal impact has not been examined. We hypothesized that these biases might be causally related. Spider phobic and low spider fearful control participants performed a visual search task in which they specified whether the deviant animal in a search array was a spider or a bird. Shorter reaction times (RTs) for spiders than for birds in this task reflect an attention bias toward spiders. Participants' expectancies regarding the likelihood of these animals being the deviant in the search array were manipulated by presenting verbal cues. Phobics were characterized by a pronounced and persistent attention bias toward spiders; controls displayed slower RTs for birds than for spiders only when spider cues had been presented. More important, we found RTs for spider detections to be virtually unaffected by the expectancy cues in both groups, whereas RTs for bird detections showed a clear influence of the cues. Our results speak to the possibility that evolution has formed attentional systems that are specific to the detection of phylogenetically salient stimuli such as threatening animals; these systems may not be as penetrable to variations in (experimentally induced) expectancies as those systems that are used for the detection of non-threatening stimuli. In sum, our findings highlight the relation between expectancies and attention engagement in general. However, expectancies may play a greater role in attention engagement in safe environments than in threatening environments. PMID:23964219

Coastal and Marine Bird Data Base

USGS Publications Warehouse

Anderson, S.H.; Geissler, P.H.; Dawson, D.K.

1980-01-01

Summary: This report discusses the development of a coastal and marine bird data base at the Migratory Bird and Habitat Research Laboratory. The system is compared with other data bases, and suggestions for future development, such as possible adaptations for other taxonomic groups, are included. The data base is based on the Statistical Analysis System but includes extensions programmed in PL/I. The Appendix shows how the system evolved. Output examples are given for heron data and pelagic bird data which indicate the types of analyses that can be conducted and output figures. The Appendixes include a retrieval language user's guide and description of the retrieval process and listing of translator program.

Real-time in vivo uric acid biosensor system for biophysical monitoring of birds.

PubMed

Gumus, A; Lee, S; Karlsson, K; Gabrielson, R; Winkler, D W; Erickson, D

2014-02-21

Research on birds has long played an important role in ecological investigations, as birds are relatively easily observed, and their high metabolic rates and diurnal habits make them quite evidently responsive to changes in their environments. A mechanistic understanding of such avian responses requires a better understanding of how variation in physiological state conditions avian behavior and integrates the effects of recent environmental changes. There is a great need for sensor systems that will allow free-flying birds to interact with their environment and make unconstrained decisions about their spatial location at the same time that their physiological state is being monitored in real time. We have developed a miniature needle-based enzymatic sensor system suitable for continuous real-time amperometric monitoring of uric acid levels in unconstrained live birds. The sensor system was constructed with Pt/Ir wire and Ag/AgCl paste. Uricase enzyme was immobilized on a 0.7 mm sensing cavity of Nafion/cellulose inner membrane to minimize the influences of background interferents. The sensor response was linear from 0.05 to 0.6 mM uric acid, which spans the normal physiological range for most avian species. We developed a two-electrode potentiostat system that drives the biosensor, reads the output current, and wirelessly transmits the data. In addition to extensive characterization of the sensor and system, we also demonstrate autonomous operation of the system by collecting in vivo extracellular uric acid measurements on a domestic chicken. The results confirm our needle-type sensor system's potential for real-time monitoring of birds' physiological state. Successful application of the sensor in migratory birds could open up a new era of studying both the physiological preparation for migration and the consequences of sustained avian flight.

A land manager's guide to point counts of birds in the Southeast

USGS Publications Warehouse

Hamel, P.B.; Smith, W.P.; Twedt, D.J.; Woehr, J.R.; Morris, E.; Hamilton, R.B.; Cooper, R.J.

1996-01-01

Current widespread concern for the status of neotropical migratory birds has sparked interest in techniques for inventorying and monitoring populations of these and other birds in southeastern forest habitats. The present guide gives detailed instructions for conducting point counts of birds. It further presents a detailed methodology for the design and conduct of inventorial and monitoring surveys based on point counts, including discussion of sample size determination, distribution of counts among habitats, cooperation among neighboring land managers, vegetation sampling, standard data format, and other topics. Appendices provide additional information, making this guide a stand-alone text for managers interested in developing inventories of bird populations on their lands.

A continuation of base-line studies for environmentally monitoring Space Transportation Systems (STS) at John F. Kennedy Space Center. Volume 4: Threatened and endangered species of the Kennedy Space Center. Part 2: Threatened and endangered birds and other threatened and endangered forms

NASA Technical Reports Server (NTRS)

Ehrhart, L. M.

1980-01-01

Data are presented which were collected by ground and aerial surveillance of 37 species of birds observed within the environs of KSC which are on lists of rare and endangered biota in Florida. Additional information was obtained on other threatened species such as the West Indian manatee, the salt marsh snake, the Indigo snake, the Gopher tortoise, the American alligator, and the Florida mouse. Results of the literature search were used to obtain a historical perspective and aid in the analysis of the field data collected.

Behaviour of laying hens in two types of aviary systems on 25 commercial farms in Sweden.

PubMed

Odén, K; Keeling, L J; Algers, B

2002-05-01

1. Fifty-one flocks of laying hens in two high-density loose-housing systems were studied on 25 commercial farms in Sweden as part of a government test programme for evaluating new systems for laying hens. Six different hybrids were used in group sizes ranging from 250 to 5 000 birds. Stocking-densities varied from 10.2 to 19.1 birds per m2 floor area. No birds were beak trimmed. 2. The distribution of birds in the system, the frequency and location of aggressive pecks and feather pecks, the dust bathing activity and the birds' fear reaction to the keeper and to a novel object were measured. Direct behaviour observations were carried out twice per flock, at weeks 35 and 55. 3. The proportion of birds at the different locations was relatively constant across the 8-h observation period in the tiered system, but changed over time in the perch system, which may reflect a difference in access to resources between the systems. At night the top perches/tiers were preferred although when stocking-density increased, other sites were also used. 4. Aggression occurred mainly on the litter or in the nest areas. It did not differ between hybrids, but increased with age in the tiered system. Feather pecks occurred mainly on the litter. Brown hybrids feather pecked more than white ones, while white hybrids reacted more both to the keeper and to a novel object than did the brown hybrids. 5. It was concluded that access to nests was insufficient in both systems, as was litter space. Feed space was insufficient in the tiered system if food requirements increased. Design of the top perches, in the perch system, should be improved to allow birds to perch high up in the system without blocking access to feed etc. for others.

Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds

USGS Publications Warehouse

Lam, Tommy Tsan-Yuk; Ip, Hon S.; Ghedin, Elodie; Wentworth, David E.; Halpin, Rebecca A.; Stockwell, Timothy B.; Spiro, David J.; Dusek, Robert J.; Bortner, James B.; Hoskins, Jenny; Bales, Bradley D.; Yparraguirre, Dan R.; Holmes, Edward C.

2012-01-01

Despite the importance of migratory birds in the ecology and evolution of avian influenza virus (AIV), there is a lack of information on the patterns of AIV spread at the intra-continental scale. We applied a variety of statistical phylogeographic techniques to a plethora of viral genome sequence data to determine the strength, pattern and determinants of gene flow in AIV sampled from wild birds in North America. These analyses revealed a clear isolation-by-distance of AIV among sampling localities. In addition, we show that phylogeographic models incorporating information on the avian flyway of sampling proved a better fit to the observed sequence data than those specifying homogeneous or random rates of gene flow among localities. In sum, these data strongly suggest that the intra-continental spread of AIV by migratory birds is subject to major ecological barriers, including spatial distance and avian flyway.

On the use of magnets to disrupt the physiological compass of birds.

PubMed

Wang, K; Mattern, E; Ritz, T

2006-10-04

Behavioral researchers have attached magnets to birds during orientation experiments, assuming that such magnets will disrupt their ability to obtain magnetic information. Here, we investigate the effect of an attached magnet on the ability to derive directional information from a radical-pair based compass mechanism. We outline in some detail the geometrical symmetries that would allow a bird to identify magnetic directions in a radical-pair based compass. We show that the artificial field through an attached magnet will quickly disrupt the birds' ability to distinguish pole-ward from equator-ward headings, but that much stronger fields are necessary to disrupt their ability to detect the magnetic axis. Together with estimates of the functional limits of a radical-pair based compass, our calculations suggest that artificial fields of comparable size to the geomagnetic field are not generally sufficient to render a radical-pair based compass non-functional.

Evaluation of a Multivariate Syndromic Surveillance System for West Nile Virus.

PubMed

Faverjon, Céline; Andersson, M Gunnar; Decors, Anouk; Tapprest, Jackie; Tritz, Pierre; Sandoz, Alain; Kutasi, Orsolya; Sala, Carole; Leblond, Agnès

2016-06-01

Various methods are currently used for the early detection of West Nile virus (WNV) but their outputs are not quantitative and/or do not take into account all available information. Our study aimed to test a multivariate syndromic surveillance system to evaluate if the sensitivity and the specificity of detection of WNV could be improved. Weekly time series data on nervous syndromes in horses and mortality in both horses and wild birds were used. Baselines were fitted to the three time series and used to simulate 100 years of surveillance data. WNV outbreaks were simulated and inserted into the baselines based on historical data and expert opinion. Univariate and multivariate syndromic surveillance systems were tested to gauge how well they detected the outbreaks; detection was based on an empirical Bayesian approach. The systems' performances were compared using measures of sensitivity, specificity, and area under receiver operating characteristic curve (AUC). When data sources were considered separately (i.e., univariate systems), the best detection performance was obtained using the data set of nervous symptoms in horses compared to those of bird and horse mortality (AUCs equal to 0.80, 0.75, and 0.50, respectively). A multivariate outbreak detection system that used nervous symptoms in horses and bird mortality generated the best performance (AUC = 0.87). The proposed approach is suitable for performing multivariate syndromic surveillance of WNV outbreaks. This is particularly relevant, given that a multivariate surveillance system performed better than a univariate approach. Such a surveillance system could be especially useful in serving as an alert for the possibility of human viral infections. This approach can be also used for other diseases for which multiple sources of evidence are available.

Statistical approaches to the analysis of point count data: a little extra information can go a long way

Treesearch

George L. Farnsworth; James D. Nichols; John R. Sauer; Steven G. Fancy; Kenneth H. Pollock; Susan A. Shriner; Theodore R. Simons

2005-01-01

Point counts are a standard sampling procedure for many bird species, but lingering concerns still exist about the quality of information produced from the method. It is well known that variation in observer ability and environmental conditions can influence the detection probability of birds in point counts, but many biologists have been reluctant to abandon point...

Echolocation in Oilbirds and swiftlets.

PubMed

Brinkløv, Signe; Fenton, M Brock; Ratcliffe, John M

2013-01-01

The discovery of ultrasonic bat echolocation prompted a wide search for other animal biosonar systems, which yielded, among few others, two avian groups. One, the South American Oilbird (Steatornis caripensis: Caprimulgiformes), is nocturnal and eats fruit. The other is a selection of diurnal, insect-eating swiftlets (species in the genera Aerodramus and Collocalia: Apodidae) from across the Indo-Pacific. Bird echolocation is restricted to lower frequencies audible to humans, implying a system of poorer resolution than the ultrasonic (>20 kHz) biosonar of most bats and toothed whales. As such, bird echolocation has been labeled crude or rudimentary. Yet, echolocation is found in at least 16 extant bird species and has evolved several times in avian lineages. Birds use their syringes to produce broadband click-type biosonar signals that allow them to nest in dark caves and tunnels, probably with less predation pressure. There are ongoing discrepancies about several details of bird echolocation, from signal design to the question about whether echolocation is used during foraging. It remains to be seen if bird echolocation is as sophisticated as that of tongue-clicking rousette bats. Bird echolocation performance appears to be superior to that of blind humans using signals of notable similarity. However, no apparent specializations have been found so far in the birds' auditory system (from middle ear to higher processing centers). The advent of light-weight recording equipment and custom software for examining signals and reconstructing flight paths now provides the potential to study the echolocation behavior of birds in more detail and resolve such issues.

Temporal dynamics of bird community composition: an analysis of baseline conditions from long-term data.

PubMed

Kampichler, Christian; Angeler, David G; Holmes, Richard T; Leito, Aivar; Svensson, Sören; van der Jeugd, Henk P; Wesołowski, Tomasz

2014-08-01

Numerous anthropogenic activities threaten the biodiversity found on earth. Because all ecological communities constantly experience temporal turnover due to natural processes, it is important to distinguish between change due to anthropogenic impact and the underlying natural rate of change. In this study, we used data sets on breeding bird communities that covered at least 20 consecutive years, from a variety of terrestrial ecosystems, to address two main questions. (1) How fast does the composition of bird communities change over time, and can we identify a baseline of natural change that distinguishes primeval systems from systems experiencing varying degrees of human impact? (2) How do patterns of temporal variation in composition vary among bird communities in ecosystems with different anthropogenic impacts? Time lag analysis (TLA) showed a pattern of increasing rate of temporal compositional change from large-scale primeval systems to disturbed and protected systems to distinctly successional systems. TLA slopes of <0.04 were typical for breeding bird communities with natural turnover, while communities subjected to anthropogenic impact were characterised by TLA slopes of >0.04. Most of the temporal variability of breeding bird communities was explained by slow changes occurring over decades, regardless of the intensity of human impact. In most of the time series, medium- and short-wave periodicity was not detected, with the exception of breeding bird communities subjected to periodic pulses (e.g. caterpillar outbreaks causing food resource peaks).

Update on ghrelin biology in birds.

PubMed

Kaiya, Hiroyuki; Kangawa, Kenji; Miyazato, Mikiya

2013-09-01

Ghrelin is a peptide found in the mucosal layer of the rat stomach that exhibits growth hormone-releasing and appetite-stimulating activities. Since the discovery of ghrelin in chicken in 2002, information on its structure, distribution, function, and receptors has been accumulated, mainly in poultry. Here, we summarize the following findings since 2008 in birds: (1) central ghrelin acts as an anorexigenic neuropeptide, but the effect of peripheral ghrelin differs depending on the chicken strain and light conditions the birds are kept in; (2) central ghrelin inhibits not only food intake but also water drinking, and it may be mediated by urocortin, a member of the corticotropin-releasing factor family; (3) peripheral ghrelin acts as an anti-lipogenic factor in broiler chickens but not in rats; (4) the enzyme involved in ghrelin acylation (ghrelin-O-acyltransferase [GOAT]) has been identified in chickens; (5) dietary lipids are used for ghrelin acylation; (6) des-acyl ghrelin administered alone or with ghrelin does not affect feeding behavior; (7) the existence and physiological function of obestatin must now be carefully examined in birds; (8) other than the growth hormone secretagogue receptors (GHS) R1a and 1b, GHS-R variants not found in mammals have been found in chicken and Japanese quail; and finally (9) little is known about the involvement of the ghrelin system in wild birds and in avian-specific behavior such as brooding and migration. Copyright © 2013 Elsevier Inc. All rights reserved.

Social Mating System and Sex-Biased Dispersal in Mammals and Birds: A Phylogenetic Analysis

PubMed Central

Mabry, Karen E.; Shelley, Erin L.; Davis, Katie E.; Blumstein, Daniel T.; Van Vuren, Dirk H.

2013-01-01

The hypothesis that patterns of sex-biased dispersal are related to social mating system in mammals and birds has gained widespread acceptance over the past 30 years. However, two major complications have obscured the relationship between these two behaviors: 1) dispersal frequency and dispersal distance, which measure different aspects of the dispersal process, have often been confounded, and 2) the relationship between mating system and sex-biased dispersal in these vertebrate groups has not been examined using modern phylogenetic comparative methods. Here, we present a phylogenetic analysis of the relationship between mating system and sex-biased dispersal in mammals and birds. Results indicate that the evolution of female-biased dispersal in mammals may be more likely on monogamous branches of the phylogeny, and that females may disperse farther than males in socially monogamous mammalian species. However, we found no support for a relationship between social mating system and sex-biased dispersal in birds when the effects of phylogeny are taken into consideration. We caution that although there are larger-scale behavioral differences in mating system and sex-biased dispersal between mammals and birds, mating system and sex-biased dispersal are far from perfectly associated within these taxa. PMID:23483957

Host range and community structure of avian nest parasites in the genus Philornis (Diptera: Muscidae) on the island of Trinidad.

PubMed

Bulgarella, Mariana; Heimpel, George E

2015-09-01

Parasite host range can be influenced by physiological, behavioral, and ecological factors. Combining data sets on host-parasite associations with phylogenetic information of the hosts and the parasites involved can generate evolutionary hypotheses about the selective forces shaping host range. Here, we analyzed associations between the nest-parasitic flies in the genus Philornis and their host birds on Trinidad. Four of ten Philornis species were only reared from one species of bird. Of the parasite species with more than one host bird species, P. falsificus was the least specific and P. deceptivus the most specific attacking only Passeriformes. Philornis flies in Trinidad thus include both specialists and generalists, with varying degrees of specificity within the generalists. We used three quantities to more formally compare the host range of Philornis flies: the number of bird species attacked by each species of Philornis, a phylogenetically informed host specificity index (Poulin and Mouillot's S TD), and a branch length-based S TD. We then assessed the phylogenetic signal of these measures of host range for 29 bird species. None of these measures showed significant phylogenetic signal, suggesting that clades of Philornis did not differ significantly in their ability to exploit hosts. We also calculated two quantities of parasite species load for the birds - the parasite species richness, and a variant of the S TD index based on nodes rather than on taxonomic levels - and assessed the signal of these measures on the bird phylogeny. We did not find significant phylogenetic signal for the parasite species load or the node-based S TD index. Finally, we calculated the parasite associations for all bird pairs using the Jaccard index and regressed these similarity values against the number of nodes in the phylogeny separating bird pairs. This analysis showed that Philornis on Trinidad tend to feed on closely related bird species more often than expected by chance.

Insects, birds and lizards as pollinators of the largest-flowered Scrophularia of Europe and Macaronesia.

PubMed

Ortega-Olivencia, Ana; Rodríguez-Riaño, Tomás; Pérez-Bote, José L; López, Josefa; Mayo, Carlos; Valtueña, Francisco J; Navarro-Pérez, Marisa

2012-01-01

It has traditionally been considered that the flowers of Scrophularia are mainly pollinated by wasps. We studied the pollination system of four species which stand out for their large and showy flowers: S. sambucifolia and S. grandiflora (endemics of the western Mediterranean region), S. trifoliata (an endemic of the Tyrrhenian islands) and S. calliantha (an endemic of the Canary Islands). Our principal aim was to test whether these species were pollinated by birds or showed a mixed pollination system between insects and birds. Censuses and captures of insects and birds were performed to obtain pollen load transported and deposited on the stigmas. Also, a qualitative and quantitative analysis of the flowers and inflorescences was carried out. Flowers were visited by Hymenoptera and by passerine birds. The Canarian species was the most visited by birds, especially by Phylloscopus canariensis, and its flowers were also accessed by juveniles of the lizard Gallotia stehlini. The most important birds in the other three species were Sylvia melanocephala and S. atricapilla. The most important insect-functional groups in the mixed pollination system were: honey-bees and wasps in S. sambucifolia; bumble-bees and wasps in S. grandiflora; wasps in S. trifoliata; and a small bee in S. calliantha. The species studied show a mixed pollination system between insects and passerine birds. In S. calliantha there is, in addition, a third agent (juveniles of Gallotia stehlini). The participation of birds in this mixed pollination system presents varying degrees of importance because, while in S. calliantha they are the main pollinators, in the other species they interact to complement the insects which are the main pollinators. A review of different florae showed that the large showy floral morphotypes of Scrophularia are concentrated in the western and central Mediterranean region, Macaronesia and USA (New Mexico).

Insects, birds and lizards as pollinators of the largest-flowered Scrophularia of Europe and Macaronesia

PubMed Central

Ortega-Olivencia, Ana; Rodríguez-Riaño, Tomás; Pérez-Bote, José L.; López, Josefa; Mayo, Carlos; Valtueña, Francisco J.; Navarro-Pérez, Marisa

2012-01-01

Background and Aims It has traditionally been considered that the flowers of Scrophularia are mainly pollinated by wasps. We studied the pollination system of four species which stand out for their large and showy flowers: S. sambucifolia and S. grandiflora (endemics of the western Mediterranean region), S. trifoliata (an endemic of the Tyrrhenian islands) and S. calliantha (an endemic of the Canary Islands). Our principal aim was to test whether these species were pollinated by birds or showed a mixed pollination system between insects and birds. Methods Censuses and captures of insects and birds were performed to obtain pollen load transported and deposited on the stigmas. Also, a qualitative and quantitative analysis of the flowers and inflorescences was carried out. Key Results Flowers were visited by Hymenoptera and by passerine birds. The Canarian species was the most visited by birds, especially by Phylloscopus canariensis, and its flowers were also accessed by juveniles of the lizard Gallotia stehlini. The most important birds in the other three species were Sylvia melanocephala and S. atricapilla. The most important insect-functional groups in the mixed pollination system were: honey-bees and wasps in S. sambucifolia; bumble-bees and wasps in S. grandiflora; wasps in S. trifoliata; and a small bee in S. calliantha. Conclusions The species studied show a mixed pollination system between insects and passerine birds. In S. calliantha there is, in addition, a third agent (juveniles of Gallotia stehlini). The participation of birds in this mixed pollination system presents varying degrees of importance because, while in S. calliantha they are the main pollinators, in the other species they interact to complement the insects which are the main pollinators. A review of different florae showed that the large showy floral morphotypes of Scrophularia are concentrated in the western and central Mediterranean region, Macaronesia and USA (New Mexico). PMID:22021816

Blood biochemistry and immune response in Aseel chicken under free range, semi-intensive, and confinement rearing systems.

PubMed

Rehman, M S; Mahmud, A; Mehmood, S; Pasha, T N; Hussain, J; Khan, M T

2017-01-01

A study was conducted to investigate the effects of 3 different rearing systems [free range ( FR: ), semi-intensive ( SI: ), and confinement ( CF: )] on blood biochemical profile and immune response in 4 varieties of Aseel chicken [Lakha ( LK: ), Mushki ( MS: ), Peshawari ( PW: ) and Sindhi ( SN: )] for 10 wk duration (7 to 16 wk). At the age of 6 wk, in total, 180 cockerels were assigned to 12 treatment groups, 3 (rearing system) × 4 (Aseel chicken variety) factorial arrangement in 7 randomized complete blocks, replicated 3 times with 5 birds in each replicate (45 birds of each variety; 60 birds in each rearing system; 36 total replicates). Blood samples were collected through brachial vein at the end of wk 16. After laboratory analysis, the recorded data for blood biochemical profile and immune response were analyzed by using 2-way ANOVA under factorial arrangement. The results showed higher (P < 0.05) plasma glucose and total protein in birds under CF. Titer against Newcastle disease virus ( NDV: ) and infectious bronchitis virus ( IBV: ) was found to be greater (P < 0.05) in SI and FR, respectively. Peshawari birds indicated higher (P < 0.05) concentration of glucose, total protein, albumin, uric acid, creatinine, and titers to NDV and IBV. Birds of LK and SN varieties also indicated maximum antibody titer against NDV and IBV, respectively. Cholesterol level was found to be greater (P < 0.05) in birds of LK and SN. Interaction of SN with FR revealed maximum (P < 0.05) cholesterol whereas interaction of PW with SI indicated maximum antibody titer against NDV. The results highlight that CF rearing system expediently affects glucose and total protein levels in birds; SI and FR confer maximum antibody titers to NDV and IBV. Birds of PW variety indicated higher glucose, total protein, albumin, uric acid, and creatinine, the lowest cholesterol under FR and the enhanced antibody titer against NDV and IBV. © 2016 Poultry Science Association Inc.

Quantification of bird-to-bird and bird-to-human infections during 2013 novel H7N9 avian influenza outbreak in China.

PubMed

Hsieh, Ying-Hen; Wu, Jianhong; Fang, Jian; Yang, Yong; Lou, Jie

2014-01-01

From February to May, 2013, 132 human avian influenza H7N9 cases were identified in China resulting in 37 deaths. We developed a novel, simple and effective compartmental modeling framework for transmissions among (wild and domestic) birds as well as from birds to human, to infer important epidemiological quantifiers, such as basic reproduction number for bird epidemic, bird-to-human infection rate and turning points of the epidemics, for the epidemic via human H7N9 case onset data and to acquire useful information regarding the bird-to-human transmission dynamics. Estimated basic reproduction number for infections among birds is 4.10 and the mean daily number of human infections per infected bird is 3.16*10-5 [3.08*10-5, 3.23*10-5]. The turning point of 2013 H7N9 epidemic is pinpointed at April 16 for bird infections and at April 9 for bird-to-human transmissions. Our result reveals very low level of bird-to-human infections, thus indicating minimal risk of widespread bird-to-human infections of H7N9 virus during the outbreak. Moreover, the turning point of the human epidemic, pinpointed at shortly after the implementation of full-scale control and intervention measures initiated in early April, further highlights the impact of timely actions on ending the outbreak. This is the first study where both the bird and human components of an avian influenza epidemic can be quantified using only the human case data.

Shades of red: bird-pollinated flowers target the specific colour discrimination abilities of avian vision.

PubMed

Shrestha, Mani; Dyer, Adrian G; Boyd-Gerny, Skye; Wong, Bob B M; Burd, Martin

2013-04-01

Colour signals are a major cue in putative pollination syndromes. There is evidence that the reflectance spectra of many flowers target the distinctive visual discrimination abilities of hymenopteran insects, but far less is known about bird-pollinated flowers. Birds are hypothesized to exert different selective pressures on floral colour compared with hymenopterans because of differences in their visual systems. We measured the floral reflectance spectra of 206 Australian angiosperm species whose floral visitors are known from direct observation rather than inferred from floral characteristics. We quantified the match between these spectra and the hue discrimination abilities of hymenopteran and avian vision, and analysed these metrics in a phylogenetically informed comparison of flowers in different pollination groups. We show that bird-visited flowers and insect-visited flowers differ significantly from each other in the chromatic cues they provide, and that the differences are concentrated near wavelengths of optimal colour discrimination by whichever class of pollinator visits the flowers. Our results indicate that angiosperms have evolved the spectral signals most likely to reinforce their pollinators' floral constancy (the tendency of individual pollinators to visit flowers of the same species) in communities of similarly coloured floral competitors. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Migratory behavior of birds affects their coevolutionary relationship with blood parasites.

PubMed

Jenkins, Tania; Thomas, Gavin H; Hellgren, Olof; Owens, Ian P F

2012-03-01

Host traits, such as migratory behavior, could facilitate the dispersal of disease-causing parasites, potentially leading to the transfer of infections both across geographic areas and between host species. There is, however, little quantitative information on whether variation in such host attributes does indeed affect the evolutionary outcome of host-parasite associations. Here, we employ Leucocytozoon blood parasites of birds, a group of parasites closely related to avian malaria, to study host-parasite coevolution in relation to host behavior using a phylogenetic comparative approach. We reconstruct the molecular phylogenies of both the hosts and parasites and use cophylogenetic tools to assess whether each host-parasite association contributes significantly to the overall congruence between the two phylogenies. We find evidence for a significant fit between host and parasite phylogenies in this system, but show that this is due only to associations between nonmigrant parasites and their hosts. We also show that migrant bird species harbor a greater genetic diversity of parasites compared with nonmigrant species. Taken together, these results suggest that the migratory habits of birds could influence their coevolutionary relationship with their parasites, and that consideration of host traits is important in predicting the outcome of coevolutionary interactions. © 2011 The Author(s). Evolution© 2011 The Society for the Study of Evolution.

Conceptual ecological model for management of breeding shrubland birds in the Mid-Atlantic Region

USGS Publications Warehouse

Peterjohn, Bruce G.

2006-01-01

While grassland birds have become the focus of increased conservation activities, the status of birds occupying shrubland habitats has received relatively little attention (Hunter et al. 2001). Yet, in eastern North America, shrubland birds exhibited consistent population declines during the past 40 years, based on data from the North American Breeding Bird Survey (Pardieck and Sauer 2001). These population declines primarily reflect large-scale changes in land use patterns during the previous century (Lorimer 2001). Large areas of marginal farmland were abandoned and underwent secondary succession during the first half of the twentieth century, producing abundant successional habitats favored by shrubland birds. As these habitats matured, combined with strict fire-suppression policies (Hunter et al. 2001), shrublands succeeded into mature forests, and shrubland bird communities were replaced by woodland birds (Irland 1982; Askins 1993). For example, while nearly 29% of New England forests were classified as sapling stage in 1950, only 8% remained at that stage in the 1980s (Askins 1993). The trend towards forest maturation and loss of shrubland habitats continues, yet concerted conservation activities have not been directed to benefit declining shrubland bird populations. The National Park Service (NPS) could contribute to shrubland bird conservation in the Mid- Atlantic Region. The NPS maintains a number of historic sites and former battlefields managed for their cultural significance but also support wildlife populations. Many of these “cultural parks” maintain open landscapes, recreating land use patterns existing at the times of the historical events. While these open landscapes are frequently managed grasslands, some parks also support successional habitats that could be managed to benefit shrubland birds. In 2005, the NPS initiated a project exploring the potential of “cultural parks” to support significant breeding grassland and shrubland bird communities. This project involved parks within three NPS Inventory and Monitoring Program (I&M) networks, Mid-Atlantic, National Capital, and Eastern Rivers and Mountains. Five parks were selected for the initial focus of this study, all of which maintain open landscapes for interpreting historic events. Most parks were selected because they contain the most extensive grassland habitats within their networks, although some also support shrubby successional habitats. The five parks included in this study are Antietam National Battlefield, Fort Necessity National Battlefield, Gettysburg National Battlefield, Manassas National Battlefield, and Monocacy National Battlefield. This conceptual ecological model is one product of this project. The information presented below allows NPS network coordinators to understand which factors should be considered when making decisions concerning shrubland management within their networks. This model provides park resource managers with information on shrubland ecology in the Mid-Atlantic Region, the ecological requirements of shrubland birds likely to occur in their parks, and management issues influencing whether significant breeding populations can occupy shrublands created and maintained in the parks. Resource managers can then make informed decisions concerning their ability to create and maintain shrubland habitats. The emphasis of this conceptual model is restricted to management of breeding shrubland birds. Additional species occur during migration and winter, and habitat requirements of shrubland birds during nonbreeding seasons may differ from those described for the breeding season.

eBird—Using citizen-science data to help solve real-world conservation challenges (Invited)

NASA Astrophysics Data System (ADS)

Sullivan, B. L.; Iliff, M. J.; Wood, C. L.; Fink, D.; Kelling, S.

2010-12-01

eBird (www.ebird.org) is an Internet-based citizen-science project that collects bird observations worldwide. eBird is foremost a tool for birders, providing users with a resource for bird information and a way to keep track of their personal bird lists, thus establishing a model for sustained participation and new project growth. Importantly, eBird data are shared with scientists and conservationists working to save birds and their habitats. Here we highlight two different ways these data are used: as a real-time data gathering and visualization tool; and as the primary resource for developing large-scale bird distribution models that explore species-habitat associations and climate change scenarios. eBird provides data across broad temporal and spatial scales, and is a valuable tool for documenting and monitoring bird populations facing a multitude of anthropogenic and environmental impacts. For example, a focused effort to monitor birds on Gulf Coast beaches using eBird is providing essential baseline data and enabling long-term monitoring of bird populations throughout the region. Additionally, new data visualization tools that incorporate data from eBird, NOAA, and Google, are specifically designed to highlight the potential impacts of the Gulf oil spill on bird populations. Through a collaboration of partners in the DataONE network, such as the Oak Ridge National Laboratory, we will use supercomputing time from the National Science Foundation’s TeraGrid to allow Lab scientists to model bird migration phenology at the population level based on eBird data. The process involves combining bird observations with remotely sensed variables such as landcover and greening index to predict bird movements. Preliminary results of these models allow us to animate bird movements across large spatial scales, and to explore how migration timing might be affected under different climate change scenarios.

Projected avifaunal responses to climate change across the U.S. National Park System.

PubMed

Wu, Joanna X; Wilsey, Chad B; Taylor, Lotem; Schuurman, Gregor W

2018-01-01

Birds in U.S. national parks find strong protection from many longstanding and pervasive threats, but remain highly exposed to effects of ongoing climate change. To understand how climate change is likely to alter bird communities in parks, we used species distribution models relating North American Breeding Bird Survey (summer) and Audubon Christmas Bird Count (winter) observations to climate data from the early 2000s and projected to 2041-2070 (hereafter, mid-century) under high and low greenhouse gas concentration trajectories, RCP8.5 and RCP2.6. We analyzed climate suitability projections over time for 513 species across 274 national parks, classifying them as improving, worsening, stable, potential colonization, and potential extirpation. U.S. national parks are projected to become increasingly important for birds in the coming decades as potential colonizations exceed extirpations in 62-100% of parks, with an average ratio of potential colonizations to extirpations of 4.1 in winter and 1.4 in summer under RCP8.5. Average species turnover is 23% in both summer and winter under RCP8.5. Species turnover (Bray-Curtis) and potential colonization and extirpation rates are positively correlated with latitude in the contiguous 48 states. Parks in the Midwest and Northeast are expected to see particularly high rates of change. All patterns are more extreme under RCP8.5 than under RCP2.6. Based on the ratio of potential colonization and extirpation, parks were classified into overall trend groups associated with specific climate-informed conservation strategies. Substantial change to bird and ecological communities is anticipated in coming decades, and current thinking suggests managing towards a forward-looking concept of ecological integrity that accepts change and novel ecological conditions, rather than focusing management goals exclusively on maintaining or restoring a static set of historical conditions.

Large-scale assessment of commensalistic–mutualistic associations between African birds and herbivorous mammals using internet photos

PubMed Central

Hadrava, Jiří; Albrecht, Tomáš; Tryjanowski, Piotr

2018-01-01

Birds sitting or feeding on live large African herbivorous mammals are a visible, yet quite neglected, type of commensalistic–mutualistic association. Here, we investigate general patterns in such relationships at large spatial and taxonomic scales. To obtain large-scale data, an extensive internet-based search for photos was carried out on Google Images. To characterize patterns of the structural organization of commensalistic–mutualistic associations between African birds and herbivorous mammals, we used a network analysis approach. We then employed phylogenetically-informed comparative analysis to explore whether features of bird visitation of mammals, i.e., their mean number, mass and species richness per mammal species, are shaped by a combination of host mammal (body mass and herd size) and environmental (habitat openness) characteristics. We found that the association web structure was only weakly nested for commensalistic as well as for mutualistic birds (oxpeckers Buphagus spp.) and African mammals. Moreover, except for oxpeckers, nestedness did not differ significantly from a null model indicating that birds do not prefer mammal species which are visited by a large number of bird species. In oxpeckers, however, a nested structure suggests a non-random assignment of birds to their mammal hosts. We also identified some new or rare associations between birds and mammals, but we failed to find several previously described associations. Furthermore, we found that mammal body mass positively influenced the number and mass of birds observed sitting on them in the full set of species (i.e., taking oxpeckers together with other bird species). We also found a positive correlation between mammal body mass and mass of non-oxpecker species as well as oxpeckers. Mammal herd size was associated with a higher mass of birds in the full set of species as well as in non-oxpecker species, and mammal species living in larger herds also attracted more bird species in the full set of species. Habitat openness influenced the mass of birds sitting on mammals as well as the number of species recorded sitting on mammals in the full set of species. In non-oxpecker species habitat openness was correlated with the bird number, mass and species richness. Our results provide evidence that patterns of bird–mammal associations can be linked to mammal and environmental characteristics and highlight the potential role of information technologies and new media in further studies of ecology and evolution. However, further study is needed to get a proper insight into the biological and methodological processes underlying the observed patterns. PMID:29576981

Bird diversity in northern Myanmar and conservation implications.

PubMed

Zhang, Ming-Xia; Kyaw, Myint; Li, Guo-Gang; Zhao, Jiang-Bo; Zeng, Xiang-Le; Swa, Kyaw; Quan, Rui-Chang

2017-09-18

We conducted four bird biodiversity surveys in the Putao area of northern Myanmar from 2015 to 2017. Combined with anecdotal information collected between 2012 and 2015, we recorded 319 bird species, including two species ( Arborophila mandellii and Lanius sphenocercus ) previously unrecorded in Myanmar. Bulbuls (Pycnonotidae), babblers (Timaliidae), pigeons and doves (Columbidae), and pheasants and partridges (Phasianidae) were the most abundant groups of birds recorded. Species richness below 1 500 m a. s. l. was higher than species richness at higher elevations. Our results suggest that the current protected areas in this region should be expanded to lower elevations to cover critical conservation gaps.

John James Audubon & the Turkey

ERIC Educational Resources Information Center

Hinshaw, Craig

2012-01-01

In the first half of the 1800s, John James Audubon roamed the wilds of America attempting to draw all the birds in their natural habitat. He published his life-sized paintings in a huge book entitled "Birds of America." Audubon developed a unique system of depicting the birds in natural poses, such as flying. After shooting the bird, he would wire…

Ethno-ornithology and conservation of wild birds in the semi-arid Caatinga of northeastern Brazil.

PubMed

Alves, Rômulo Romeu Nóbrega; Leite, Railson Cidennys Lourenço; Souto, Wedson Medeiros Silva; Bezerra, Dandara M M; Loures-Ribeiro, Alan

2013-02-27

The utilization of birds as pets has been recognized as one of the principal threats to global avifauna. Most of the information about the use and sale of birds as pets has been limited to areas of high biodiversity and whose impacts of anthropic actions have been widely broadcast internationally, for example for the Amazon Forest and forest remnants of Southeast Asia. The Caatinga predominates in the semi-arid region of Brazil, and is one of the semi-arid biomes with the greatest biological diversity in the world, where 511 species of birds exist. Many of these birds are used as pets, a common practice in the region, which has important conservationist implications but has been little studied. Therefore, the aim of the present study was to detail aspects of the use of birds as pets in a locality in the semi-arid region of Northeast Brazil. Information on the use of avifauna was obtained through interviews and visits to the homes of 78 wild bird keepers. A total of 41 species of birds were recorded, mostly of the families Emberizidae (n = 9 species), Columbidae (n = 7 species), Icteridae (n = 6 species) and Psittacidae (n = 3 species). The birds that were most often recorded were Paroaria dominicana (n = 79 especimens), Sporophila albogularis (n = 67), Aratinga cactorum (n = 49), Sporophila lineola (n = 36), Sicalis flaveola (n = 29) and Sporophila nigricollis (n = 27). The use of wild birds in the area studied, as an example of what occurs in other places in the semi-arid Northeast, demonstrates that such activities persist in the region, in spite of being illegal, and have been happening in clandestine or semi-clandestine manner. No statistically significant correlation were found between socioeconomic factors and keeping birds as pets reflects the cultural importance of this practice of rearing wild birds for pets in the region, which is widespread among the local population, independent of socioeconomic factors. Obviously, human pressure on the avifauna exploited has ecological implications and makes it clear that conservationist measures should consider the cultural, economic and social aspects of these practices. These measures should be carried out by both directly combating the illegal traffic of animals and promoting educational campaigns aimed at all the players involved, from the collectors up to the consumer and wild bird keepers.

Molecular prevalence and genotyping of Chlamydia spp. in wild birds from South Korea.

PubMed

Jeong, Jipseol; An, Injung; Oem, Jae-Ku; Wang, Seung-Jun; Kim, Yongkwan; Shin, Jeong-Hwa; Woo, Chanjin; Kim, Youngsik; Jo, Seong-Deok; Son, Kidong; Lee, Saemi; Jheong, Weonhwa

2017-07-07

Wild birds are reservoirs for Chlamydia spp. Of the total 225 samples from wild birds during January to September 2016 in Korea, 4 (1.8%) and 2 (0.9%) showed positive for Chlamydia psittaci and Chlamydia gallinacea, respectively. Phylogenetic analyses and comparisons of sequence identities for outer-membrane protein A (ompA) revealed that Korean C. psittaci fall into three previously known genotypes; genotype E, 1V and 6N, whereas the Korean C. gallinacea were classified as new variants of C. gallinacea. Our study demonstrates that wild birds in South Korea carry at least two Chlamydia species: C. psittaci and C. gallinacea, and provides new information on the epidemiology of avian chlamydiosis in wild birds.

Role of projection in the control of bird flocks

PubMed Central

Pearce, Daniel J. G.; Miller, Adam M.; Rowlands, George; Turner, Matthew S.

2014-01-01

Swarming is a conspicuous behavioral trait observed in bird flocks, fish shoals, insect swarms, and mammal herds. It is thought to improve collective awareness and offer protection from predators. Many current models involve the hypothesis that information coordinating motion is exchanged among neighbors. We argue that such local interactions alone are insufficient to explain the organization of large flocks of birds and that the mechanism for the exchange of long-range information necessary to control their density remains unknown. We show that large flocks self-organize to the maximum density at which a typical individual still can see out of the flock in many directions. Such flocks are marginally opaque—an external observer also still can see a substantial fraction of sky through the flock. Although this seems intuitive, we show it need not be the case; flocks might easily be highly diffuse or entirely opaque. The emergence of marginal opacity strongly constrains how individuals interact with one another within large swarms. It also provides a mechanism for global interactions: an individual can respond to the projection of the flock that it sees. This provides for faster information transfer and hence rapid flock dynamics, another advantage over local models. From a behavioral perspective, it optimizes the information available to each bird while maintaining the protection of a dense, coherent flock. PMID:25002501

Science for avian conservation: Priorities for the new millennium

USGS Publications Warehouse

Ruth, J.M.; Petit, D.R.; Sauer, J.R.; Samuel, M.D.; Johnson, F.A.; Fornwall, M.D.; Korschgen, C.E.; Bennett, J.P.

2003-01-01

Over the past decade, bird conservation activities have become the preeminent natural resource conservation effort in North America. Maturation of the North American Waterfowl Management Plan (NAWMP), establishment of Partners in Flight (PIF), and creation of comprehensive colonial waterbird and shorebird conservation plans have stimulated unprecedented interest in, and funding for, bird conservation in the United States, Canada, Mexico, and other countries in the western hemisphere. Key to that success in the United States has been active collaboration among federal, state and local governments, conservation organizations, academia, and industry. The U.S. Department of the Interior (DOI), which has primary statutory responsibility for migratory bird conservation and management, has been a key partner.Despite the great strides that have been made in bird conservation science, historical approaches to research and monitoring have often failed to provide sufficient information and understanding to effectively manage bird populations at large spatial scales. That shortcoming, and the lack of an integrated strategy and comprehensive set of research priorities, is more evident in light of the goals established by the North American Bird Conservation Initiative (NABCI). The NABCI is a trinational, coalition-driven effort to provide an organizational umbrella for existing conservation initiatives. The expanded focus of NABCI and individual bird conservation initiatives is to work together in an integrated, holistic fashion to keep common birds common and to increase populations of declining, threatened, and endangered species.To assist bird conservation initiatives in defining goals and developing new approaches to effective research, the U.S. Geological Survey (USGS), the research agency of DOI, convened a workshop, “Science for Avian Conservation: Understanding, Modeling, and Applying Ecological Relationships,” on 31 October–2 November 2000, which brought together 51 scientists from USGS, as well as scientists and conservationists from other agencies and organizations actively participating in NABCI. As the lead federal agency involved in bird conservation research, USGS has a clear legislative mandate to provide scientific information upon which future management plans and actions will be built.This article summarizes key issues and recommendations that arose from that workshop. The principal goal of the workshop was to guide USGS in defining its role, assessing capabilities, and directing future agency planning in support of bird conservation. A major component was to identify key areas of research needed in this new era of bird conservation science. Although tailored to the mission of USGS, workshop recommendations visualize a bold direction for future avian conservation science in which research and monitoring work in tandem with management to increase our understanding of avian populations and the processes that affect them. The USGS is a science agency whose role is to provide objective scientific information to management agencies and therefore is not directly involved in high-level resource policy-making or on-the-ground management decision making. Nevertheless, it is important to note that effective policy decision making must integrate the best available science with political and economic realities to achieve successful avian conservation—an important subject acknowledged in the workshop, but largely beyond its scope of discussion. Williams (2003) questions regarding how scientific information can be effectively communicated to decision makers and incorporated into natural resource policy. Without an aggressive vision and the willingness of researchers, managers, and policy makers to implement it, conservation of North American birds is likely to proceed without the full benefit of scientific investigation. These recommendations represent the principal conclusions drawn by workshop participants and do not necessarily reflect official USGS policy.

Antigen tissue distribution of Avian bornavirus (ABV) in psittacine birds with natural spontaneous proventricular dilatation disease and ABV genotype 1 infection.

PubMed

Wünschmann, Arno; Honkavuori, Kirsi; Briese, Thomas; Lipkin, W Ian; Shivers, Jan; Armien, Aníbal G

2011-07-01

Tissues of 10 psittacines from aviary 1 ("case birds") and 5 psittacines from different aviaries were investigated for the presence of Avian bornavirus (ABV) antigen by immunohistochemistry using a polyclonal serum specific for the viral nucleocapsid (N) protein. Seven of 10 case birds had clinical signs, and necropsy findings consistent with proventricular dilatation disease (PDD) while 3 case birds and the 5 birds from other aviaries did not exhibit signs and lesions of this disease. In birds with clinical signs of PDD, ABV antigen was largely limited to neuroectodermal cells including neurons, astroglia, and ependymal cells of the central nervous system, neurons of the peripheral nervous system, and adrenal cells. ABV antigen was present in the nuclei and cytoplasm of infected cells. In 2 case birds that lacked signs and lesions of PDD, viral antigen had a more widespread distribution and was present in nuclei and cytoplasm of epithelial cells of the alimentary and urogenital tract, retina, heart, skeletal muscle, and skin in addition to the mentioned neuroectodermal cells. ABV RNA was identified by reverse transcription polymerase chain reaction (RT-PCR) in tissues of all 7 case birds available for testing from aviary 1, including 4 birds with PDD lesions and the 3 birds without PDD lesions. Sequencing and phylogenetic analysis indicated the presence of ABV genotype 1 in all cases. Findings further substantiate a role of ABV in PDD of psittacine bird species.

Internal roosting location is associated with differential use of the outdoor range by free-range laying hens.

PubMed

Pettersson, I C; Weeks, C A; Norman, K I; Knowles, T G; Nicol, C J

2018-04-01

1. In commercial free-range systems for laying hens, popholes to the outdoor range are often installed on one side of the house only. In multi-tier systems, it is possible that some individuals fail to access the range due to internal barriers to movement. 2. Five commercial multi-tier flocks from different units were studied. For each flock, two different colour markers were used to distinguish 200 birds roosting near the popholes (NP-Roost) and 200 birds roosting far from the popholes (FP-Roost) at night. The following day, counts of marked birds on the range and inside the house were performed. 3. Significantly more NP-Roost birds were observed in all areas of the outdoor range than FP-Roost birds the next day. Distance of FP area from the popholes was very strongly positively correlated with effect size in the adjacent range area. 4. Additionally, in the indoor area far from the popholes (FP) more FP-Roost birds were observed the next day than NP-Roost birds. In the indoor area near to the popholes (NP) more NP-Roost birds were observed the next day than FP-Roost birds. 5. These results suggest that roosting location is associated with differential range use when popholes are only available on one side of the shed as birds that roosted far from the popholes used the range less.

Chlamydiosis in 2 biologists investigating disease occurrences in wild waterfowl

USGS Publications Warehouse

Wobeser, Gary; Brand, Christopher J.

1982-01-01

Chlamydiosis (ornithosis, psittacosis) is an infectious disease of birds that can be transmitted to humans. Human infections are probably acquired by inhalation of aerosols containing elementary bodies of the causative agent Chlamydia psittaci, from bird droppings, or from tissues. Infected birds do not have to be ill to transmit the organism (Schachter and Dawson 1978). The disease in humans is considered an occupational risk for people working with pet birds (particularly psittacine species) and poultry, but all avian species can be considered as potential reservoirs (Schachter and Dawson 1978). Burkhart and Page (1971) listed >130 species of wild birds as being infected.The purpose of this report is to draw the disease to the attention of those working with wild birds by describing 2 cases acquired from wild waterfowl and by reviewing other information on human infections associated with wild birds. We do this because the disease can be serious if not treated properly, and because the disease is not usually associated with wild birds the diagnosis may not be considered by physicians without some prompting from the patient.

Do birds of like feather flock together? The use of a novel 13C+D combustion isotope analyzer to track bird migration

NASA Astrophysics Data System (ADS)

Saad, N.

2011-12-01

Information on spring migration routes, geographic linkages among winter, spring, and breeding locations, and potential geographic effects on arrival body condition of a variety of avian species is so far little known. Stable isotope ratios are exquisitely sensitive to the biochemistry of living organisms and the nutrients available to them. Isotope ratios provide detailed knowledge useful in a variety of fields, including birds migration, through a combination of stable-isotope measurements of carbon (13C/12C) and hydrogen (D/H) isotopes of flight feathers and breast feathers of tissues representing different periods of dietary integration and body composition analyses. Associations among specific geographic areas, habitat use, and arrival condition can be elucidated through the measurement of these dual isotopes. We report here on the development of a novel laser spectroscopy based system for the simultaneous analysis of the stable isotope ratios of carbon (13C/12C) and hydrogen (D/H) that is robust, easy-to-use, and is the first stable isotope ratio analysis system to combine the measurement of 13C/12C and D/H in one simple analysis from a bulk organic sample with an application to bird migration. The system comprises a combustion module to convert the organic sample into CO2 and H2O and a Cavity Ring-Down Spectrometer (CRDS) that analyzes the combustion species inside an optical cavity based on the molecular absorption of individual isotopomers. This CRDS uses dual lasers to target the four isotpomers of interest: 12CO2, 13CO2, H2O and HDO. The system delivers a typical precision of 0.1 permil for δ13C and 1.5 permil for δD that parallels that achieved by IRMS, but with an unprecedented simplicity that allows ecologists to leverage the science and elucidate the avian migration patterns.

75 FR 2559 - Information Collection Sent to the Office of Management and Budget (OMB) for Approval; OMB...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-15

... and traditional use of migratory birds and their eggs for subsistence use by indigenous inhabitants of... of migratory birds and their eggs by indigenous inhabitants of Alaska do not significantly increase...

Effects of Selective Logging on Birds in the Sierra de Coalcoman, Sierra Madre del Sur, Michoacan, Western Mexico

Treesearch

Jose Fernando Villaseñor; Neyra Sosa; Laura Villaseñor

2005-01-01

In order to determine the effects of selective logging on pine-oak forest?s bird communities in central-western Mexico, we gathered information through 10-min point counts in plots without wood extraction and sites logged at different times in the past (1, 4, and 8 years). We did not find evidences to argue for effects of logging on bird communities; the study plots...

Greater sage-grouse as an umbrella species for shrubland passerine birds: a multiscale assessment

USGS Publications Warehouse

Hanser, Steven E.; Knick, Steven T.; Knick, Steven T.; Connelly, John W.

2011-01-01

Working groups and government agen-cies are planning and conducting land actions in sagebrush (Artemisia spp.) habitats to benefit Greater Sage-Grouse (Centrocercus urophasianus) populations. Managers have adopted an umbrella concept, creating habitat characteristics specific to sage-grouse requirements, in the belief that other wildlife species dependent on sagebrush will benefit. We tested the efficacy of this approach by first identifying the primary environmental gradients underlying sagebrush steppe bird com-munities (including Greater Sage-Grouse). We integrated field sampling for birds and vegetation with geographic information system (GIS) data to characterize 305 sites sampled throughout the current range of Greater Sage-Grouse in the Intermountain West, United States. The primary environmental axis defining the bird community represented a gradient from local-scale Wyoming/basin big sagebrush (A. t. ssp. wyomingensis/A. t. ssp. tridentata), and bare ground cover to local and regional grassland cover; the second axis repre-sented a transition from low-elevation Wyoming/basin big sagebrush and bare ground to mountain big sagebrush (A. t. ssp. vaseyana) and habitat edge. We identified the relative overlap of sage-grouse with 13 species of passerine birds along the multiscale gradients and estimated the width of the umbrella when applying management guidelines specific to sage-grouse. Passerine birds associated with sagebrush steppe habitats had high levels of overlap with Greater Sage-Grouse along the multiscale environmental gradients. However, the overlap of the umbrella was prima-rily a function of the broad range of sagebrush habitats used by sage-grouse. Management that focuses on creating a narrow set of plot-scale con-ditions will likely be less effective than restoration efforts that recognize landscape scale heterogene-ity and multiscale organization of habitats. These multiscale efforts may improve some sage-grouse habitats and strengthen the management umb-rella for shrub steppe passerine birds.

Echolocation in Oilbirds and swiftlets

PubMed Central

Brinkløv, Signe; Fenton, M. Brock; Ratcliffe, John M.

2013-01-01

The discovery of ultrasonic bat echolocation prompted a wide search for other animal biosonar systems, which yielded, among few others, two avian groups. One, the South American Oilbird (Steatornis caripensis: Caprimulgiformes), is nocturnal and eats fruit. The other is a selection of diurnal, insect-eating swiftlets (species in the genera Aerodramus and Collocalia: Apodidae) from across the Indo-Pacific. Bird echolocation is restricted to lower frequencies audible to humans, implying a system of poorer resolution than the ultrasonic (>20 kHz) biosonar of most bats and toothed whales. As such, bird echolocation has been labeled crude or rudimentary. Yet, echolocation is found in at least 16 extant bird species and has evolved several times in avian lineages. Birds use their syringes to produce broadband click-type biosonar signals that allow them to nest in dark caves and tunnels, probably with less predation pressure. There are ongoing discrepancies about several details of bird echolocation, from signal design to the question about whether echolocation is used during foraging. It remains to be seen if bird echolocation is as sophisticated as that of tongue-clicking rousette bats. Bird echolocation performance appears to be superior to that of blind humans using signals of notable similarity. However, no apparent specializations have been found so far in the birds' auditory system (from middle ear to higher processing centers). The advent of light-weight recording equipment and custom software for examining signals and reconstructing flight paths now provides the potential to study the echolocation behavior of birds in more detail and resolve such issues. PMID:23755019

Parameter estimation for chaotic systems using improved bird swarm algorithm

NASA Astrophysics Data System (ADS)

Xu, Chuangbiao; Yang, Renhuan

2017-12-01

Parameter estimation of chaotic systems is an important problem in nonlinear science and has aroused increasing interest of many research fields, which can be basically reduced to a multidimensional optimization problem. In this paper, an improved boundary bird swarm algorithm is used to estimate the parameters of chaotic systems. This algorithm can combine the good global convergence and robustness of the bird swarm algorithm and the exploitation capability of improved boundary learning strategy. Experiments are conducted on the Lorenz system and the coupling motor system. Numerical simulation results reveal the effectiveness and with desirable performance of IBBSA for parameter estimation of chaotic systems.

Heterospecific eavesdropping in ant-following birds of the Neotropics is a learned behaviour.

PubMed

Pollock, Henry S; Martínez, Ari E; Kelley, J Patrick; Touchton, Janeene M; Tarwater, Corey E

2017-10-25

Animals eavesdrop on other species to obtain information about their environments. Heterospecific eavesdropping can yield tangible fitness benefits by providing valuable information about food resources and predator presence. The ability to eavesdrop may therefore be under strong selection, although extensive research on alarm-calling in avian mixed-species flocks has found only limited evidence that close association with another species could select for innate signal recognition. Nevertheless, very little is known about the evolution of eavesdropping behaviour and the mechanism of heterospecific signal recognition, particularly in other ecological contexts, such as foraging. To understand whether heterospecific eavesdropping was an innate or learned behaviour in a foraging context, we studied heterospecific signal recognition in ant-following birds of the Neotropics, which eavesdrop on vocalizations of obligate ant-following species to locate and recruit to swarms of the army ant Eciton burchellii , a profitable food resource. We used a playback experiment to compare recruitment of ant-following birds to vocalizations of two obligate species at a mainland site (where both species are present) and a nearby island site (where one species remains whereas the other went extinct approx. 40 years ago). We found that ant-following birds recruited strongly to playbacks of the obligate species present at both island and mainland sites, but the island birds did not recruit to playbacks of the absent obligate species. Our results strongly suggest that (i) ant-following birds learn to recognize heterospecific vocalizations from ecological experience and (ii) island birds no longer recognize the locally extinct obligate species after eight generations of absence from the island. Although learning appears to be the mechanism of heterospecific signal recognition in ant-following birds, more experimental tests are needed to fully understand the evolution of eavesdropping behaviour. © 2017 The Author(s).

Perceptual Strategies of Pigeons to Detect a Rotational Centre—A Hint for Star Compass Learning?

PubMed Central

Helduser, Sascha; Mouritsen, Henrik; Güntürkün, Onur

2015-01-01

Birds can rely on a variety of cues for orientation during migration and homing. Celestial rotation provides the key information for the development of a functioning star and/or sun compass. This celestial compass seems to be the primary reference for calibrating the other orientation systems including the magnetic compass. Thus, detection of the celestial rotational axis is crucial for bird orientation. Here, we use operant conditioning to demonstrate that homing pigeons can principally learn to detect a rotational centre in a rotating dot pattern and we examine their behavioural response strategies in a series of experiments. Initially, most pigeons applied a strategy based on local stimulus information such as movement characteristics of single dots. One pigeon seemed to immediately ignore eccentric stationary dots. After special training, all pigeons could shift their attention to more global cues, which implies that pigeons can learn the concept of a rotational axis. In our experiments, the ability to precisely locate the rotational centre was strongly dependent on the rotational velocity of the dot pattern and it crashed at velocities that were still much faster than natural celestial rotation. We therefore suggest that the axis of the very slow, natural, celestial rotation could be perceived by birds through the movement itself, but that a time-delayed pattern comparison should also be considered as a very likely alternative strategy. PMID:25807499

Using molt cycles to categorize the age of tropical birds: an integrative new system

Treesearch

Jared D. Wolfe; Thomas B. Ryder; Peter Pyle

2010-01-01

Accurately differentiating age classes is essential for the long-term monitoring of resident New World tropical bird species. Molt and plumage criteria have long been used to accurately age temperate birds, but application of temperate age-classification models to the Neotropics has been hindered because annual life-cycle events of tropical birds do not always...

Oak Ridge Reservation Bird Records and Population Trends

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roy, W. K.; Giffen, N. R.; Wade, M. C.

Bird data have been collected through surveys, environmental assessments, and other observations for decades in the Oak Ridge National Environmental Research Park, located on the US Department of Energy’s Oak Ridge Reservation (ORR) in East Tennessee. Birds were recorded in a variety of habitats, including wetlands, interior forests, grasslands, ponds, corridors, forest edges, and more. Most of the information was gathered from waterfowl surveys conducted from 1990 to 2008, from Partners in Flight (PIF) breeding bird surveys conducted from 1995 to 2013, and from past publications and research on Reservation birds. We have also included our own observations and, inmore » a few instances, credible observations of ORR birds of which we have been made aware through eBird or discussions with area ornithologists and bird watchers. For the period 1950-2014, we were able to document 228 species of birds on the ORR. Several of these species are known from historic records only, while others were not known to have ever occurred on the Reservation until recently. This report does not include PIF breeding bird data from the 2014 season or any records after July 2014. Twenty-two species--approximately 10% of the total number of species observed--have state-listed status in Tennessee as endangered, threatened, or in need of management. Of the 228 species we documented, 120 are believed to be breeding birds on the ORR.« less

Oak Ridge Reservation Bird Records and Population Trends

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roy, W. Kelly; Giffen, Neil R.; Wade, Murray

Bird data have been collected through surveys, environmental assessments, and other observations for decades in the Oak Ridge National Environmental Research Park, located on the US Department of Energy s Oak Ridge Reservation (ORR) in East Tennessee. Birds were recorded in a variety of habitats, including wetlands, interior forests, grasslands, ponds, corridors, forest edges, and more. Most of the information was gathered from waterfowl surveys conducted from 1990 to 2008, from Partners in Flight (PIF) breeding bird surveys conducted from 1995 to 2013, and from past publications and research on Reservation birds. We have also included our own observations and,more » in a few instances, credible observations of ORR birds of which we have been made aware through eBird or discussions with area ornithologists and bird watchers. For the period 1950 2014, we were able to document 228 species of birds on the ORR. Several of these species are known from historic records only, while others were not known to have ever occurred on the Reservation until recently. This report does not include PIF breeding bird data from the 2014 season or any records after July 2014. Twenty-two species approximately 10% of the total number of species observed have state-listed status in Tennessee as endangered, threatened, or in need of management. Of the 228 species we documented, 120 are believed to be breeding birds on the ORR.« less

Bird associations with shrubsteppe plant communities at the proposed reference repository location in southeastern Washington

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schuler, C.A.; Rickard, W.H.; Sargeant, G.A.

1988-03-01

This report provides information on te seasonal use of shrubsteppe vegetation by bird species at the RRL. Bird abundance and distribution were studied at the RRL to ensure that the DOE monitored migratory bird species pursuant to the Migratory Bird Treaty Act and to assess potential impacts of site characterization activities on bird populations. Birds were counted on two transects that together sampled an areas of 1.39 km/sup 2/. The relative abundance of birds, species richness, seasonal distribution, and the association of breeding shrubsteppe birds with major vegetation types were determined from Janurary through December 1987. Only 38 species weremore » counted during 82 surveys. Total bird density during the nesting season (March-June) was 42.96 birdskm/sup 2/ and the density for the entire year was 26.74 birdskm/sup 2/. The characteristic nesting birds in shrubsteppe habitats were western meadowlark, sage sparrow, burrowing owl, mourning dove, horned lark, long-billed curlew, lark sparrow, and loggerhead shrike. Western meadowlark and sage sparrows were the most abundant breeding birds with an average density of 11.25 and 7.76 birdskm/sup 2/, respectively. Seasonal distribution of birds varied with species, but most species were present from March to September. Distribution and abunandance of nesting birds were correlated with habitat type. About 63% of the habitat surveyed was sagebrush, 26% was cheatgrass, and 11% was spiny hopsage. Sagebrush habitat supproted a greeater total bird density than cheatgrass or hopsage habitats. Sage sparrows were closely associated with sagebrush habitats, while western meadowlarks showed no strong habitat affinities. 22 refs., 9 figs., 6 tabs« less

Towards Understanding the Role of Colour Information in Scene Perception using Night Vision Device

DTIC Science & Technology

2009-06-01

possessing a visual system much simplified from that of living birds, reptiles, and teleost (bony) fish , which are generally tetrachromatic (Bowmaker...Levkowitz and Herman (1992) speculated that the results might be limited to “ blob ” detection. A possible mediating factor may have been the size and...sharpness of the “ blobs ” used in their task. Mullen (1985) showed that the visual system is much more sensitive to the 7 DSTO-RR-0345 high spatial

Sex differences in the representation of call stimuli in a songbird secondary auditory area

PubMed Central

Giret, Nicolas; Menardy, Fabien; Del Negro, Catherine

2015-01-01

Understanding how communication sounds are encoded in the central auditory system is critical to deciphering the neural bases of acoustic communication. Songbirds use learned or unlearned vocalizations in a variety of social interactions. They have telencephalic auditory areas specialized for processing natural sounds and considered as playing a critical role in the discrimination of behaviorally relevant vocal sounds. The zebra finch, a highly social songbird species, forms lifelong pair bonds. Only male zebra finches sing. However, both sexes produce the distance call when placed in visual isolation. This call is sexually dimorphic, is learned only in males and provides support for individual recognition in both sexes. Here, we assessed whether auditory processing of distance calls differs between paired males and females by recording spiking activity in a secondary auditory area, the caudolateral mesopallium (CLM), while presenting the distance calls of a variety of individuals, including the bird itself, the mate, familiar and unfamiliar males and females. In males, the CLM is potentially involved in auditory feedback processing important for vocal learning. Based on both the analyses of spike rates and temporal aspects of discharges, our results clearly indicate that call-evoked responses of CLM neurons are sexually dimorphic, being stronger, lasting longer, and conveying more information about calls in males than in females. In addition, how auditory responses vary among call types differ between sexes. In females, response strength differs between familiar male and female calls. In males, temporal features of responses reveal a sensitivity to the bird's own call. These findings provide evidence that sexual dimorphism occurs in higher-order processing areas within the auditory system. They suggest a sexual dimorphism in the function of the CLM, contributing to transmit information about the self-generated calls in males and to storage of information about the bird's auditory experience in females. PMID:26578918

Sex differences in the representation of call stimuli in a songbird secondary auditory area.

PubMed

Giret, Nicolas; Menardy, Fabien; Del Negro, Catherine

2015-01-01

Understanding how communication sounds are encoded in the central auditory system is critical to deciphering the neural bases of acoustic communication. Songbirds use learned or unlearned vocalizations in a variety of social interactions. They have telencephalic auditory areas specialized for processing natural sounds and considered as playing a critical role in the discrimination of behaviorally relevant vocal sounds. The zebra finch, a highly social songbird species, forms lifelong pair bonds. Only male zebra finches sing. However, both sexes produce the distance call when placed in visual isolation. This call is sexually dimorphic, is learned only in males and provides support for individual recognition in both sexes. Here, we assessed whether auditory processing of distance calls differs between paired males and females by recording spiking activity in a secondary auditory area, the caudolateral mesopallium (CLM), while presenting the distance calls of a variety of individuals, including the bird itself, the mate, familiar and unfamiliar males and females. In males, the CLM is potentially involved in auditory feedback processing important for vocal learning. Based on both the analyses of spike rates and temporal aspects of discharges, our results clearly indicate that call-evoked responses of CLM neurons are sexually dimorphic, being stronger, lasting longer, and conveying more information about calls in males than in females. In addition, how auditory responses vary among call types differ between sexes. In females, response strength differs between familiar male and female calls. In males, temporal features of responses reveal a sensitivity to the bird's own call. These findings provide evidence that sexual dimorphism occurs in higher-order processing areas within the auditory system. They suggest a sexual dimorphism in the function of the CLM, contributing to transmit information about the self-generated calls in males and to storage of information about the bird's auditory experience in females.

Overview of national bird population monitoring programs and databases

Treesearch

Gregory S. Butcher; Bruce Peterjohn; C. John Ralph

1993-01-01

A number of programs have been set up to monitor populations of nongame migratory birds. We review these programs and their purposes and provide information on obtaining data or results from these programs. In addition, we review recommendations for improving these programs.

77 FR 65854 - Notice of Request for Extension of Approval of an Information Collection; Importation of Products...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-31

... products of carcasses, and eggs (other than hatching eggs) of poultry, game birds, and other birds to... importation apply. The regulations in Sec. 94.6 include provisions that allow poultry meat that originates in...

An in depth view of avian sleep.

PubMed

Beckers, Gabriël J L; Rattenborg, Niels C

2015-03-01

Brain rhythms occurring during sleep are implicated in processing information acquired during wakefulness, but this phenomenon has almost exclusively been studied in mammals. In this review we discuss the potential value of utilizing birds to elucidate the functions and underlying mechanisms of such brain rhythms. Birds are of particular interest from a comparative perspective because even though neurons in the avian brain homologous to mammalian neocortical neurons are arranged in a nuclear, rather than a laminar manner, the avian brain generates mammalian-like sleep-states and associated brain rhythms. Nonetheless, until recently, this nuclear organization also posed technical challenges, as the standard surface EEG recording methods used to study the neocortex provide only a superficial view of the sleeping avian brain. The recent development of high-density multielectrode recording methods now provides access to sleep-related brain activity occurring deep in the avian brain. Finally, we discuss how intracerebral electrical imaging based on this technique can be used to elucidate the systems-level processing of hippocampal-dependent and imprinting memories in birds. Copyright © 2014 Elsevier Ltd. All rights reserved.

The Neural Basis of Long-Distance Navigation in Birds.

PubMed

Mouritsen, Henrik; Heyers, Dominik; Güntürkün, Onur

2016-01-01

Migratory birds can navigate over tens of thousands of kilometers with an accuracy unobtainable for human navigators. To do so, they use their brains. In this review, we address how birds sense navigation- and orientation-relevant cues and where in their brains each individual cue is processed. When little is currently known, we make educated predictions as to which brain regions could be involved. We ask where and how multisensory navigational information is integrated and suggest that the hippocampus could interact with structures that represent maps and compass information to compute and constantly control navigational goals and directions. We also suggest that the caudolateral nidopallium could be involved in weighing conflicting pieces of information against each other, making decisions, and helping the animal respond to unexpected situations. Considering the gaps in current knowledge, some of our suggestions may be wrong. However, our main aim is to stimulate further research in this fascinating field.

Use of Wild Bird Surveillance, Human Case Data and GIS Spatial Analysis for Predicting Spatial Distributions of West Nile Virus in Greece

PubMed Central

Valiakos, George; Papaspyropoulos, Konstantinos; Giannakopoulos, Alexios; Birtsas, Periklis; Tsiodras, Sotirios; Hutchings, Michael R.; Spyrou, Vassiliki; Pervanidou, Danai; Athanasiou, Labrini V.; Papadopoulos, Nikolaos; Tsokana, Constantina; Baka, Agoritsa; Manolakou, Katerina; Chatzopoulos, Dimitrios; Artois, Marc; Yon, Lisa; Hannant, Duncan; Petrovska, Liljana; Hadjichristodoulou, Christos; Billinis, Charalambos

2014-01-01

West Nile Virus (WNV) is the causative agent of a vector-borne, zoonotic disease with a worldwide distribution. Recent expansion and introduction of WNV into new areas, including southern Europe, has been associated with severe disease in humans and equids, and has increased concerns regarding the need to prevent and control future WNV outbreaks. Since 2010, 524 confirmed human cases of the disease have been reported in Greece with greater than 10% mortality. Infected mosquitoes, wild birds, equids, and chickens have been detected and associated with human disease. The aim of our study was to establish a monitoring system with wild birds and reported human cases data using Geographical Information System (GIS). Potential distribution of WNV was modelled by combining wild bird serological surveillance data with environmental factors (e.g. elevation, slope, land use, vegetation density, temperature, precipitation indices, and population density). Local factors including areas of low altitude and proximity to water were important predictors of appearance of both human and wild bird cases (Odds Ratio = 1,001 95%CI = 0,723–1,386). Using GIS analysis, the identified risk factors were applied across Greece identifying the northern part of Greece (Macedonia, Thrace) western Greece and a number of Greek islands as being at highest risk of future outbreaks. The results of the analysis were evaluated and confirmed using the 161 reported human cases of the 2012 outbreak predicting correctly (Odds = 130/31 = 4,194 95%CI = 2,841–6,189) and more areas were identified for potential dispersion in the following years. Our approach verified that WNV risk can be modelled in a fast cost-effective way indicating high risk areas where prevention measures should be implemented in order to reduce the disease incidence. PMID:24806216

Projected Hg dietary exposure of 3 bird species nesting on a contaminated floodplain (South River, Virginia, USA).

PubMed

Wang, Jincheng; Newman, Michael C

2013-04-01

Dietary Hg exposure was modeled for Carolina wren (Thryothorus ludovicianus), Eastern song sparrow (Melospiza melodia), and Eastern screech owl (Otus asio) nesting on the contaminated South River floodplain (Virginia, USA). Parameterization of Monte-Carlo models required formal expert elicitation to define bird body weight and feeding ecology characteristics because specific information was either unavailable in the published literature or too difficult to collect reliably by field survey. Mercury concentrations and weights for candidate food items were obtained directly by field survey. Simulations predicted the probability that an adult bird during breeding season would ingest specific amounts of Hg during daily foraging and the probability that the average Hg ingestion rate for the breeding season of an adult bird would exceed published rates reported to cause harm to other birds (>100 ng total Hg/g body weight per day). Despite the extensive floodplain contamination, the probabilities that these species' average ingestion rates exceeded the threshold value were all <0.01. Sensitivity analysis indicated that overall food ingestion rate was the most important factor determining projected Hg ingestion rates. Expert elicitation was useful in providing sufficiently reliable information for Monte-Carlo simulation. Copyright © 2013 SETAC.

Cost-benefit trade-offs of bird activity in apple orchards.

PubMed

Peisley, Rebecca K; Saunders, Manu E; Luck, Gary W

2016-01-01

Birds active in apple orchards in south-eastern Australia can contribute positively (e.g., control crop pests) or negatively (e.g., crop damage) to crop yields. Our study is the first to identify net outcomes of these activities, using six apple orchards, varying in management intensity, in south-eastern Australia as a study system. We also conducted a predation experiment using real and artificial codling moth (Cydia pomonella) larvae (a major pest in apple crops). We found that: (1) excluding birds from branches of apple trees resulted in an average of 12.8% more apples damaged by insects; (2) bird damage to apples was low (1.9% of apples); and (3) when trading off the potential benefits (biological control) with costs (bird damage to apples), birds provided an overall net benefit to orchard growers. We found that predation of real codling moth larvae was higher than for plasticine larvae, suggesting that plasticine prey models are not useful for inferring actual predation levels. Our study shows how complex ecological interactions between birds and invertebrates affect crop yield in apples, and provides practical strategies for improving the sustainability of orchard systems.

Statistical Learning Is Constrained to Less Abstract Patterns in Complex Sensory Input (but not the Least)

PubMed Central

Emberson, Lauren L.; Rubinstein, Dani

2016-01-01

The influence of statistical information on behavior (either through learning or adaptation) is quickly becoming foundational to many domains of cognitive psychology and cognitive neuroscience, from language comprehension to visual development. We investigate a central problem impacting these diverse fields: when encountering input with rich statistical information, are there any constraints on learning? This paper examines learning outcomes when adult learners are given statistical information across multiple levels of abstraction simultaneously: from abstract, semantic categories of everyday objects to individual viewpoints on these objects. After revealing statistical learning of abstract, semantic categories with scrambled individual exemplars (Exp. 1), participants viewed pictures where the categories as well as the individual objects predicted picture order (e.g., bird1—dog1, bird2—dog2). Our findings suggest that participants preferentially encode the relationships between the individual objects, even in the presence of statistical regularities linking semantic categories (Exps. 2 and 3). In a final experiment we investigate whether learners are biased towards learning object-level regularities or simply construct the most detailed model given the data (and therefore best able to predict the specifics of the upcoming stimulus) by investigating whether participants preferentially learn from the statistical regularities linking individual snapshots of objects or the relationship between the objects themselves (e.g., bird_picture1— dog_picture1, bird_picture2—dog_picture2). We find that participants fail to learn the relationships between individual snapshots, suggesting a bias towards object-level statistical regularities as opposed to merely constructing the most complete model of the input. This work moves beyond the previous existence proofs that statistical learning is possible at both very high and very low levels of abstraction (categories vs. individual objects) and suggests that, at least with the current categories and type of learner, there are biases to pick up on statistical regularities between individual objects even when robust statistical information is present at other levels of abstraction. These findings speak directly to emerging theories about how systems supporting statistical learning and prediction operate in our structure-rich environments. Moreover, the theoretical implications of the current work across multiple domains of study is already clear: statistical learning cannot be assumed to be unconstrained even if statistical learning has previously been established at a given level of abstraction when that information is presented in isolation. PMID:27139779

Early Birds in Korea: Exporting Defense AT and L Has Far Reaching Impact

DTIC Science & Technology

2015-11-01

studying the Defense AT&L magazine published for the U.S. Depart-ment of Defense (DoD) by the Defense Acquisition University (DAU). The study club’s...April Publications of the Early Birds Study group draw information and inspiration from Defense AT&L magazine . Collage of Early Birds Study Group...study club name. The club established two main objectives: (1) study the De- fense AT&L magazine published in English to learn advanced defense

Blood protozoa of free-living birds

USGS Publications Warehouse

Herman, C.M.; McDiarmid, Archibald

1969-01-01

Blood protozoa were first reported from wild birds in 1884. Since then numerous surveys throughout the world have demonstrated their presence in a wide variety of hosts and localities with continuing designations of new species. Taxonomic determinations include parasites in the genera Plasmodium, Haemoproteus, Leucocytozoon, Babesia, Lankesterella and Trypanosoma. Transmission of Plasmodium by mosquitoes was demonstrated with a bird parasite before these insects were proven as vectors of human malaria. All the genera under consideration require an insect vector to complete their life-cycles and susceptible vectors have been demonstrated. Most experimental work on the blood protozoa of birds has been carried on with captive birds. An extensive volume of research has been conducted on Plasmodium because of its close similarity to malaria in man. Field studies that would provide information on the epizootiology of occurrence of these parasites in wild populations have been very limited, mainly confined to single blood film surveys. Such data are inadequate to provide an understanding of true prevalence or incidence or of factual knowledge of their impact on the wild population. Mechanisms for procuring such information are available in some cases and can be developed to fit other situations. Isodiagnosis, inoculation of blood from wild birds into susceptible captive hosts, has revealed a prevalence of over 60 % for Plasmodium in situations where microscope examination of single peripheral blood preparations yielded less than 1 %. Culture of bone marrow collected by biopsy demonstrates high prevalence of trypanosomes even when none are evident from microscopic examination of blood. Often preparations of tissues collected at necropsy reveal Leucocytozoon and Lankesterella when examination of peripheral blood gave no indication of infection. Methods developed by bird ringers provide techniques for obtaining repeat examinations of free-living birds that can yield further pertinent data. The use that has been made of these techniques, beyond the mere procurement of a single blood film, is reviewed from the standpoint of providing knowledge of the epizootiology of the blood protozoa of birds and their further potential is projected.

Bird diversity in northern Myanmar and conservation implications

PubMed Central

Zhang, Ming-Xia; Kyaw, Myint; Li, Guo-Gang; Zhao, Jiang-Bo; Zeng, Xiang-Le; Swa, Kyaw; Quan, Rui-Chang

2017-01-01

We conducted four bird biodiversity surveys in the Putao area of northern Myanmar from 2015 to 2017. Combined with anecdotal information collected between 2012 and 2015, we recorded 319 bird species, including two species (Arborophila mandellii and Lanius sphenocercus) previously unrecorded in Myanmar. Bulbuls (Pycnonotidae), babblers (Timaliidae), pigeons and doves (Columbidae), and pheasants and partridges (Phasianidae) were the most abundant groups of birds recorded. Species richness below 1 500 m a. s. l. was higher than species richness at higher elevations. Our results suggest that the current protected areas in this region should be expanded to lower elevations to cover critical conservation gaps. PMID:29181901

A Minimally Invasive Method for Sampling Nest and Roost Cavities for Fungi: a Novel Approach to Identify the Fungi Associated with Cavity-Nesting Birds

Treesearch

Michelle A. Jusino; Daniel Lindner; John K. Cianchetti; Adam T. Grisé; Nicholas J. Brazee; Jeffrey R. Walters

2014-01-01

Relationships among cavity-nesting birds, trees, and wood decay fungi pose interesting management challenges and research questions in many systems. Ornithologists need to understand the relationships between cavity-nesting birds and fungi in order to understand the habitat requirements of these birds. Typically, researchers rely on fruiting body surveys to identify...

The Significance of Mating System and Nonbreeding Behavior to Population and Forest Patch Use by Migrant Birds

Treesearch

Eugene S. Morton; Bridget J. M. Stutchbury

2005-01-01

Migratory birds are birds of two worlds, breeding in the temperate zone then living as tropical birds for most of the year. We show two aspects of this unique biology that are important considerations for their conservation. First, habitat selection for breeding must include their need for extra-pair mating opportunities. Second, non-breeding distributions in tropical...

Overview of avian toxicity studies for the Deepwater Horizon Natural Resource Damage Assessment

USGS Publications Warehouse

Bursian, Steven J.; Alexander, C.R.; Cacela, Dave; Cunningham, Fred L.; Dean, Karen M.; Dorr, Brian S.; Ellis, Christine K.; Godard-Codding, Céline A.J.; Guglielmo, Christopher G.; Hanson-Dorr, Katie C.; Harr, Kendall E.; Healy, Katherine A.; Hooper, Michael J.; Horak, Katherine E.; Isanhart, John P.; Kennedy, Lisa V.; Link, Jane E.; Maggini, Ivan; Moye, John K.; Perez, Christina R.; Pritsos, Chris A.; Shriner, Susan A.; Trust, Kinberly A.; Tuttle, Peter L.

2017-01-01

The Oil Pollution Act of 1990 establishes liability for injuries to natural resources because of the release or threat of release of oil. Assessment of injury to natural resources resulting from an oil spill and development and implementation of a plan for the restoration, rehabilitation, replacement or acquisition of natural resources to compensate for those injuries is accomplished through the Natural Resource Damage Assessment (NRDA) process. The NRDA process began within a week of the Deepwater Horizon oil spill, which occurred on April 20, 2010. During the spill, more than 8500 dead and impaired birds representing at least 93 avian species were collected. In addition, there were more than 3500 birds observed to be visibly oiled. While information in the literature at the time helped to identify some of the effects of oil on birds, it was not sufficient to fully characterize the nature and extent of the injuries to the thousands of live oiled birds, or to quantify those injuries in terms of effects on bird viability. As a result, the US Fish and Wildlife Service proposed various assessment activities to inform NRDA injury determination and quantification analyses associated with the Deepwater Horizon oil spill, including avian toxicity studies. The goal of these studies was to evaluate the effects of oral exposure to 1–20 ml of artificially weathered Mississippi Canyon 252 oil kg bw-1 day-1 from one to 28 days or one to five applications of oil to 20% of the bird's surface area. It was thought that these exposure levels would not result in immediate or short-term mortality but might result in physiological effects that ultimately could affect avian survival, reproduction and health. These studies included oral dosing studies, an external dosing study, metabolic and flight performance studies and field-based flight studies. Results of these studies indicated changes in hematologic endpoints including formation of Heinz bodies and changes in cell counts. There were also effects on multiple organ systems, cardiac function and oxidative status. External oiling affected flight patterns and time spent during flight tasks indicating that migration may be affected by short-term repeated exposure to oil. Feather damage also resulted in increased heat loss and energetic demands. The papers in this special issue indicate that the combined effects of oil toxicity and feather effects in avian species, even in the case of relatively light oiling, can significantly affect the overall health of birds.

The Birds and the Bees...and the Bats.

ERIC Educational Resources Information Center

Foote, MaryAnn

1990-01-01

Pollination vectors of a variety of types are described including beetles, bees, flies, moths, birds, bats, and the wind. Some of the adaptations of plants designed to help facilitate pollination are discussed. Strategies for incorporating this information into a lesson plan are suggested. (CW)

Conceptual ecological model for management of breeding grassland birds in the Mid-Atlantic Region

USGS Publications Warehouse

Peterjohn, Bruce G.

2006-01-01

The status of grassland birds has become an increasingly important conservation issue. These species exhibit the most consistent population declines of any group of North American birds during the past 40 years. Anecdotal evidence suggests these declines have been occurring for nearly a century (Peterjohn and Sauer 1999). While the widespread conversion of grasslands into other habitats contributed to these declining populations, other factors such as habitat fragmentation and mowing regimes are also implicated (Vickery et al. 1999a). This plight of grassland birds has heightened awareness of the need for concerted conservation actions to reverse these seriously declining population trends. The National Park Service (NPS) is positioned to potentially contribute to grassland bird conservation in the Mid-Atlantic Region. The NPS maintains a number of historic sites and former battlefields that are managed for their cultural significance but also support wildlife populations. Many of these “cultural parks” maintain open landscapes to recreate land use patterns that existed at the times of the historical events. These open landscapes are primarily managed grasslands which could be maintained to benefit grassland birds. In 2005, the NPS initiated a project exploring the potential of “cultural parks” to support significant breeding grassland bird communities. This project involved parks within three NPS Inventory and Monitoring Program (I&M) networks, Mid-Atlantic, National Capital, and Eastern Rivers and Mountains. Five parks were selected for the initial focus of this study, all of which maintain open landscapes for interpretation of historic events. Most parks were selected because they represent the most extensive grassland habitats within their networks, with the rationale that if these parks cannot support significant breeding grassland bird communities, then parks with smaller acreages cannot support these communities either. The five parks included in this study are: Antietam National Battlefield, Fort Necessity National Battlefield, Gettysburg National Battlefield, Manassas National Battlefield, and Monocacy National Battlefield. This conceptual ecological model is one product of this project. The information presented below allows NPS Network Coordinators to understand the factors to consider when making decisions concerning grassland management within their networks. This model provides park Resource Managers with information on grassland ecology in the Mid-Atlantic Region, the ecological requirements of grassland birds likely to occur in their parks, and management issues that influence whether significant breeding populations can be expected to occupy grasslands created and maintained in the parks. The Resource Managers can then make informed decisions concerning their ability to create and maintain grassland habitats. The emphasis of this conceptual model is restricted to management of breeding grassland birds. Additional species may occur in this region during migration and winter, while habitat requirements of all grassland birds during nonbreeding seasons will differ from those described for the breeding season.

Mourning dove population trend estimates from Call-Count and North American Breeding Bird Surveys

USGS Publications Warehouse

Sauer, J.R.; Dolton, D.D.; Droege, S.

1994-01-01

The mourning dove (Zenaida macroura) Callcount Survey and the North American Breeding Bird Survey provide information on population trends of mourning doves throughout the continental United States. Because surveys are an integral part of the development of hunting regulations, a need exists to determine which survey provides precise information. We estimated population trends from 1966 to 1988 by state and dove management unit, and assessed the relative efficiency of each survey. Estimates of population trend differ (P lt 0.05) between surveys in 11 of 48 states; 9 of 11 states with divergent results occur in the Eastern Management Unit. Differences were probably a consequence of smaller sample sizes in the Callcount Survey. The Breeding Bird Survey generally provided trend estimates with smaller variances than did the Callcount Survey. Although the Callcount Survey probably provides more withinroute accuracy because of survey methods and timing, the Breeding Bird Survey has a larger sample size of survey routes and greater consistency of coverage in the Eastern Unit.

Social learning in nest-building birds: a role for familiarity.

PubMed

Guillette, Lauren M; Scott, Alice C Y; Healy, Susan D

2016-03-30

It is becoming apparent that birds learn from their own experiences of nest building. What is not clear is whether birds can learn from watching conspecifics build. As social learning allows an animal to gain information without engaging in costly trial-and-error learning, first-time builders should exploit the successful habits of experienced builders. We presented first-time nest-building male zebra finches with either a familiar or an unfamiliar conspecific male building with material of a colour the observer did not like. When given the opportunity to build, males that had watched a familiar male build switched their material preference to that used by the familiar male. Males that observed unfamiliar birds did not. Thus, first-time nest builders use social information and copy the nest material choices when demonstrators are familiar but not when they are strangers. The relationships between individuals therefore influence how nest-building expertise is socially transmitted in zebra finches. © 2016 The Author(s).

Social learning in nest-building birds: a role for familiarity

PubMed Central

Guillette, Lauren M.; Scott, Alice C. Y.; Healy, Susan D.

2016-01-01

It is becoming apparent that birds learn from their own experiences of nest building. What is not clear is whether birds can learn from watching conspecifics build. As social learning allows an animal to gain information without engaging in costly trial-and-error learning, first-time builders should exploit the successful habits of experienced builders. We presented first-time nest-building male zebra finches with either a familiar or an unfamiliar conspecific male building with material of a colour the observer did not like. When given the opportunity to build, males that had watched a familiar male build switched their material preference to that used by the familiar male. Males that observed unfamiliar birds did not. Thus, first-time nest builders use social information and copy the nest material choices when demonstrators are familiar but not when they are strangers. The relationships between individuals therefore influence how nest-building expertise is socially transmitted in zebra finches. PMID:27009230

Antigen tissue distribution of Avian bornavirus (ABV) in psittacine birds with natural spontaneous proventricular dilatation disease and ABV genotype 1 infection

PubMed Central

Wünschmann, Arno; Honkavuori, Kirsi; Briese, Thomas; Lipkin, W. Ian; Shivers, Jan; Armien, Aníbal G.

2014-01-01

Tissues of 10 psittacines from aviary 1 (“case birds”) and 5 psittacines from different aviaries were investigated for the presence of Avian bornavirus (ABV) antigen by immunohistochemistry using a polyclonal serum specific for the viral nucleocapsid (N) protein. Seven of 10 case birds had clinical signs, and necropsy findings consistent with proventricular dilatation disease (PDD) while 3 case birds and the 5 birds from other aviaries did not exhibit signs and lesions of this disease. In birds with clinical signs of PDD, ABV antigen was largely limited to neuroectodermal cells including neurons, astroglia, and ependymal cells of the central nervous system, neurons of the peripheral nervous system, and adrenal cells. ABV antigen was present in the nuclei and cytoplasm of infected cells. In 2 case birds that lacked signs and lesions of PDD, viral antigen had a more widespread distribution and was present in nuclei and cytoplasm of epithelial cells of the alimentary and urogenital tract, retina, heart, skeletal muscle, and skin in addition to the mentioned neuroectodermal cells. ABV RNA was identified by reverse transcription polymerase chain reaction (RT-PCR) in tissues of all 7 case birds available for testing from aviary 1, including 4 birds with PDD lesions and the 3 birds without PDD lesions. Sequencing and phylogenetic analysis indicated the presence of ABV genotype 1 in all cases. Findings further substantiate a role of ABV in PDD of psittacine bird species. PMID:21908314

A survey of endangered waterbirds on Maui and Oahu and assessment of potential impacts to waterbirds from the proposed Hawaii Geothermal Project transmission corridor. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Evans, K.; Woodside, D.; Bruegmann, M.

1994-08-01

A survey of endangered waterbirds on Maui and Oahu was conducted during August and September 1993 to identify potential waterbird habitats within the general area of the proposed Hawaii Geothermal Project transmission corridor and to assess the potential impacts to endangered waterbird of installing and operating a high voltage transmission line from the Island of Hawaii to the islands of Oahu and Maui. Annual waterbird survey information and other literature containing information on specific wetland sites were summarized. Literature describing impacts of overhead transmission lines on birds was used to evaluate potential impacts of the proposed project on endangered waterbirds,more » resident wading birds, and migratory shorebirds and waterfowl. On Oahu, five wetland habitats supporting endangered Hawaiian waterbirds were identified within 2.5 miles of the proposed transmission line corridor. On Maui, three wetland habitats supporting endangered Hawaiian waterbirds were identified within the general area of the proposed transmission line corridor. Several of the wetlands identified on Oahu and Maui also supported resident wading birds and migratory shorebirds and waterfowl. Endangered waterbirds, resident wading birds, and migratory birds may collide with the proposed transmission lines wires. The frequency and numbers of bird collisions is expected to be greater on Oahu than on Maui because more wetland habitat exists and greater numbers of birds occur in the project area on Oahu. In addition, the endangered Hawaiian goose and the endangered Hawaiian petrel may be impacted by the proposed segment of the Hawaii Geothermal Project transmission line on Maui.« less

Effect of a free-range raising system on growth performance, carcass yield, and meat quality of slow-growing chicken.

PubMed

Wang, K H; Shi, S R; Dou, T C; Sun, H J

2009-10-01

Experiments were conducted to evaluate the effect of free-range raising systems on growth performance, carcass yield, and meat quality of slow-growing chickens. Slow-growing female chickens, Gushi chickens, were selected as the experimental birds. Two hundred 1-d-old female chicks were raised in a pen for 35 d. On d 36, ninety healthy birds, with similar BW (353.7+/-32.1g), were selected and randomly assigned to 2 treatments (indoor treatment and free-range treatment, P>0.05). Each treatment was represented by 3 groups containing 15 birds (45 birds per treatment). During the indoor treatment, the chickens were raised in floor pens in a conventional poultry research house (7 birds/m2). In the free-range treatment, the chickens were housed in a similar indoor house (7 birds/m2); in addition, they also had a free-range grass paddock (1 bird/m2). All birds were provided with the same starter and finisher diets and were raised for 112 d. Results showed that the BW and weight gain of the chickens in the free-range treatment were much lower than that of the chickens in the indoor floor treatments (P<0.05). There was no effect of the free-range raising system on eviscerated carcass, breast, thigh, and wing yield (P>0.05). However, the abdominal fat yield and tibia strength (P<0.05) significantly declined. The nutrient composition (water, protein, and fat), water-holding capacity, shear force, and pH of the muscle were largely unaffected (P>0.05) by the free-range raising system. The data indicated that the free-range raising system could significantly reduce growth performance, abdominal fat, and tibia strength, but with no effect on carcass traits and meat quality in slow-growing chickens.

Cross-species transmission and emergence of novel viruses from birds.

PubMed

Chan, Jasper Fuk-Woo; To, Kelvin Kai-Wang; Chen, Honglin; Yuen, Kwok-Yung

2015-02-01

Birds, the only living member of the Dinosauria clade, are flying warm-blooded vertebrates displaying high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system. Birds provide the natural reservoir for numerous viral species and therefore gene source for evolution, emergence and dissemination of novel viruses. The intrusions of human into natural habitats of wild birds, the domestication of wild birds as pets or racing birds, and the increasing poultry consumption by human have facilitated avian viruses to cross species barriers to cause zoonosis. Recently, a novel adenovirus was exclusively found in birds causing an outbreak of Chlamydophila psittaci infection among birds and humans. Instead of being the primary cause of an outbreak by jumping directly from bird to human, a novel avian virus can be an augmenter of another zoonotic agent causing the outbreak. A comprehensive avian virome will improve our understanding of birds' evolutionary dynamics. Copyright © 2015 Elsevier B.V. All rights reserved.

Birds Shed RNA-Viruses According to the Pareto Principle

PubMed Central

Jankowski, Mark D.; Williams, Christopher J.; Fair, Jeanne M.; Owen, Jennifer C.

2013-01-01

A major challenge in disease ecology is to understand the role of individual variation of infection load on disease transmission dynamics and how this influences the evolution of resistance or tolerance mechanisms. Such information will improve our capacity to understand, predict, and mitigate pathogen-associated disease in all organisms. In many host-pathogen systems, particularly macroparasites and sexually transmitted diseases, it has been found that approximately 20% of the population is responsible for approximately 80% of the transmission events. Although host contact rates can account for some of this pattern, pathogen transmission dynamics also depend upon host infectiousness, an area that has received relatively little attention. Therefore, we conducted a meta-analysis of pathogen shedding rates of 24 host (avian) – pathogen (RNA-virus) studies, including 17 bird species and five important zoonotic viruses. We determined that viral count data followed the Weibull distribution, the mean Gini coefficient (an index of inequality) was 0.687 (0.036 SEM), and that 22.0% (0.90 SEM) of the birds shed 80% of the virus across all studies, suggesting an adherence of viral shedding counts to the Pareto Principle. The relative position of a bird in a distribution of viral counts was affected by factors extrinsic to the host, such as exposure to corticosterone and to a lesser extent reduced food availability, but not to intrinsic host factors including age, sex, and migratory status. These data provide a quantitative view of heterogeneous virus shedding in birds that may be used to better parameterize epidemiological models and understand transmission dynamics. PMID:23991129

Coffee Agroforests Remain Beneficial for Neotropical Bird Community Conservation across Seasons

PubMed Central

Peters, Valerie E.; Cooper, Robert J.; Carroll, C. Ron

2013-01-01

Coffee agroforestry systems and secondary forests have been shown to support similar bird communities but comparing these habitat types are challenged by potential biases due to differences in detectability between habitats. Furthermore, seasonal dynamics may influence bird communities differently in different habitat types and therefore seasonal effects should be considered in comparisons. To address these issues, we incorporated seasonal effects and factors potentially affecting bird detectability into models to compare avian community composition and dynamics between coffee agroforests and secondary forest fragments. In particular, we modeled community composition and community dynamics of bird functional groups based on habitat type (coffee agroforest vs. secondary forest) and season while accounting for variation in capture probability (i.e. detectability). The models we used estimated capture probability to be similar between habitat types for each dietary guild, but omnivores had a lower capture probability than frugivores and insectivores. Although apparent species richness was higher in coffee agroforest than secondary forest, model results indicated that omnivores and insectivores were more common in secondary forest when accounting for heterogeneity in capture probability. Our results largely support the notion that shade-coffee can serve as a surrogate habitat for secondary forest with respect to avian communities. Small coffee agroforests embedded within the typical tropical countryside matrix of secondary forest patches and small-scale agriculture, therefore, may host avian communities that resemble those of surrounding secondary forest, and may serve as viable corridors linking patches of forest within these landscapes. This information is an important step toward effective landscape-scale conservation in Neotropical agricultural landscapes. PMID:24058437

OmniBird: a miniature PTZ NIR sensor system for UCAV day/night autonomous operations

NASA Astrophysics Data System (ADS)

Yi, Steven; Li, Hui

2007-04-01

Through a SBIR funding from NAVAIR, we have successfully developed an innovative, miniaturized, and lightweight PTZ UCAV imager called OmniBird for UCAV taxiing. The proposed OmniBird will be able to fit in a small space. The designed zoom capability allows it to acquire focused images for targets ranging from 10 to 250 feet. The innovative panning mechanism also allows the system to have a field of view of +/- 100 degrees within the provided limited spacing (6 cubic inches). The integrated optics, camera sensor, and mechanics solution will allow the OmniBird to stay optically aligned and shock-proof under harsh environments.

Sero-survey of Avian Influenza in backyard poultry and wild bird species in Iran-2014.

PubMed

Fallah Mehrabadi, M H; Bahonar, A R; Vasfi Marandi, M; Sadrzadeh, A; Tehrani, F; Salman, M D

2016-06-01

In almost all villages in Iran backyard birds, especially chickens, are kept for egg and meat production. AI H9N2 subtype is endemic in Iran. Therefore, estimation of AI prevalence among these birds is important to determine the risk of transmission of infection to commercial farms. The aim of this study was to estimate subclinical infections or previous exposure to H5, H7, and H9 subtypes and to identify potentially important determinants of prevalence of this infectious at premises level in backyard poultry, bird gardens, zoos, and wild bird markets in Iran. A survey was conducted using a cross-sectional design throughout the entire country. A total of 329 villages, seven bird gardens, three zoos and five wild bird markets were included. In each village four families that kept birds were included in the collection of biological samples and background information. The Enzyme-Linked Immunosorbent Assay (ELISA) was used as the screening test and all ELISA-positive samples were examined with the HI test to differentiate H5, H7, and H9. Among the bird gardens, eight of 15 premises (53.3%) were positive in both the ELISA test and HI for H9N2. Testing of samples collected in the villages revealed that 296 out of 329 villages (90%) had positive ELISA tests and also HI tests for H9. The HI-H9 mean titers in positive units were significantly higher than negative units (P<.001). This study revealed no significant statistical differences between risk variables in seropositive and seronegative bird gardens in the case of H9 (P>.05). The results of this study showed that among the risk variables, mountainous area was a protective factor and lack of hygienic disposal of dead birds was a risk factor for AI; this was also observed in rural poultry. The high sero-prevalence of influenza H9N2 in rural domestic poultry indicates that the disease is endemic. It is necessary to include backyard poultry in any surveillance system and control strategy due to the existence of AIV in backyard poultry and the possibility of transmission of infection to commercial poultry farms. Implementation of an AI surveillance program and biosecurity measures can be useful to control this infection and prevent AI from spreading to commercial farms. Furthermore in Iran there is no program for destruction of birds infected with the H9N2, so an effective vaccination program with regard to issues such as acceptability and cost-benefit must play an important role in reducing infections in backyard poultry. Copyright © 2016. Published by Elsevier B.V.

Expanding biological data standards development processes for US IOOS: visual line transect observing community for mammal, bird, and turtle data

USGS Publications Warehouse

Fornwall, M.; Gisiner, R.; Simmons, S. E.; Moustahfid, Hassan; Canonico, G.; Halpin, P.; Goldstein, P.; Fitch, R.; Weise, M.; Cyr, N.; Palka, D.; Price, J.; Collins, D.

2012-01-01

The US Integrated Ocean Observing System (IOOS) has recently adopted standards for biological core variables in collaboration with the US Geological Survey/Ocean Biogeographic Information System (USGS/OBIS-USA) and other federal and non-federal partners. In this Community White Paper (CWP) we provide a process to bring into IOOS a rich new source of biological observing data, visual line transect surveys, and to establish quality data standards for visual line transect observations, an important source of at-sea bird, turtle and marine mammal observation data. The processes developed through this exercise will be useful for other similar biogeographic observing efforts, such as passive acoustic point and line transect observations, tagged animal data, and mark-recapture (photo-identification) methods. Furthermore, we suggest that the processes developed through this exercise will serve as a catalyst for broadening involvement by the larger marine biological data community within the goals and processes of IOOS.

Evolution of bird genomes-a transposon's-eye view.

PubMed

Kapusta, Aurélie; Suh, Alexander

2017-02-01

Birds, the most species-rich monophyletic group of land vertebrates, have been subject to some of the most intense sequencing efforts to date, making them an ideal case study for recent developments in genomics research. Here, we review how our understanding of bird genomes has changed with the recent sequencing of more than 75 species from all major avian taxa. We illuminate avian genome evolution from a previously neglected perspective: their repetitive genomic parasites, transposable elements (TEs) and endogenous viral elements (EVEs). We show that (1) birds are unique among vertebrates in terms of their genome organization; (2) information about the diversity of avian TEs and EVEs is changing rapidly; (3) flying birds have smaller genomes yet more TEs than flightless birds; (4) current second-generation genome assemblies fail to capture the variation in avian chromosome number and genome size determined with cytogenetics; (5) the genomic microcosm of bird-TE "arms races" has yet to be explored; and (6) upcoming third-generation genome assemblies suggest that birds exhibit stability in gene-rich regions and instability in TE-rich regions. We emphasize that integration of cytogenetics and single-molecule technologies with repeat-resolved genome assemblies is essential for understanding the evolution of (bird) genomes. © 2016 New York Academy of Sciences.

Detection of Influenza A viruses at migratory bird stopover sites in Michigan, USA.

PubMed

Lickfett, Todd M; Clark, Erica; Gehring, Thomas M; Alm, Elizabeth W

2018-01-01

Introduction: Influenza A viruses have the potential to cause devastating illness in humans and domestic poultry. Wild birds are the natural reservoirs of Influenza A viruses and migratory birds are implicated in their global dissemination. High concentrations of this virus are excreted in the faeces of infected birds and faecal contamination of shared aquatic habitats can lead to indirect transmission among birds via the faecal-oral route. The role of migratory birds in the spread of avian influenza has led to large-scale surveillance efforts of circulating avian influenza viruses through direct sampling of live and dead wild birds. Environmental monitoring of bird habitats using molecular detection methods may provide additional information on the persistence of influenza virus at migratory stopover sites distributed across large spatial scales. Materials and methods: In the current study, faecal and water samples were collected at migratory stopover sites and evaluated for Influenza A by real-time quantitative reverse transcriptase PCR. Results and Discussion: This study found that Influenza A was detected at 53% of the evaluated stopover sites, and 7% and 4.8% of the faecal and water samples, respectively, tested positive for Influenza A virus. Conclusion: Environmental monitoring detected Influenza A at stopover sites used by migratory birds.

Ethno-ornithology and conservation of wild birds in the semi-arid Caatinga of northeastern Brazil

PubMed Central

2013-01-01

The utilization of birds as pets has been recognized as one of the principal threats to global avifauna. Most of the information about the use and sale of birds as pets has been limited to areas of high biodiversity and whose impacts of anthropic actions have been widely broadcast internationally, for example for the Amazon Forest and forest remnants of Southeast Asia. The Caatinga predominates in the semi-arid region of Brazil, and is one of the semi-arid biomes with the greatest biological diversity in the world, where 511 species of birds exist. Many of these birds are used as pets, a common practice in the region, which has important conservationist implications but has been little studied. Therefore, the aim of the present study was to detail aspects of the use of birds as pets in a locality in the semi-arid region of Northeast Brazil. Information on the use of avifauna was obtained through interviews and visits to the homes of 78 wild bird keepers. A total of 41 species of birds were recorded, mostly of the families Emberizidae (n = 9 species), Columbidae (n = 7 species), Icteridae (n = 6 species) and Psittacidae (n = 3 species). The birds that were most often recorded were Paroaria dominicana (n = 79 especimens), Sporophila albogularis (n = 67), Aratinga cactorum (n = 49), Sporophila lineola (n = 36), Sicalis flaveola (n = 29) and Sporophila nigricollis (n = 27). The use of wild birds in the area studied, as an example of what occurs in other places in the semi-arid Northeast, demonstrates that such activities persist in the region, in spite of being illegal, and have been happening in clandestine or semi-clandestine manner. No statistically significant correlation were found between socioeconomic factors and keeping birds as pets reflects the cultural importance of this practice of rearing wild birds for pets in the region, which is widespread among the local population, independent of socioeconomic factors. Obviously, human pressure on the avifauna exploited has ecological implications and makes it clear that conservationist measures should consider the cultural, economic and social aspects of these practices. These measures should be carried out by both directly combating the illegal traffic of animals and promoting educational campaigns aimed at all the players involved, from the collectors up to the consumer and wild bird keepers. PMID:23445769

Space-based ornithology: studying bird migration and environmental change in North America

NASA Astrophysics Data System (ADS)

Smith, James A.; Deppe, Jill L.

2008-10-01

Natural fluctuations in the availability of critical stopover sites coupled with anthropogenic destruction of wetlands, land-use change, and anticipated losses due to climate change present migratory birds with a formidable challenge. Space based technology in concert with bird migration modeling and geographical information analysis yields new opportunities to shed light on the distribution and movement of organisms on the planet and their sensitivity to human disturbances and environmental changes. At the NASA Goddard Space Flight Center, we are creating ecological forecasting tools for science and application users to address the consequences of loss of wetlands, flooding, drought or other natural disasters such as hurricanes on avian biodiversity and bird migration. We use an individual-based bird biophysical migration model, driven by remotely sensed land surface data, climate and hydrologic data, and biological field observations to study migratory bird responses to environmental change in North America. Simulation allows us to study bird migration across multiple scales and can be linked to mechanistic processes describing the time and energy budget states of migrating birds. We illustrate our approach by simulating the spring migration of pectoral sandpipers from the Gulf of Mexico to Alaska. Mean stopover length and trajectory patterns are consistent with field observations.

Space-Based Ornithology - Studying Bird Migration and Environmental Change in North America

NASA Technical Reports Server (NTRS)

Smith, James A.; Deppe, Jill L.

2008-01-01

Natural fluctuations in the availability of critical stopover sites coupled with anthropogenic destruction of wetlands, land-use change, and anticipated losses due to climate change present migratory birds with a formidable challenge. Space based technology in concert with bird migration modeling and geographical information analysis yields new opportunities to shed light on the distribution and movement of organisms on the planet and their sensitivity to human disturbances and environmental changes. At the NASA Goddard Space Flight Center, we are creating ecological forecasting tools for science and application users to address the consequences of loss of wetlands, flooding, drought or other natural disasters such as hurricanes on avian biodiversity and bird migration. We use an individual-based bird biophysical migration model, driven by remotely sensed land surface data, climate and hydrologic data, and biological field observations to study migratory bird responses to environmental change in North America. Simulation allows us to study bird migration across multiple scales and can be linked to mechanistic processes describing the time and energy budget states of migrating birds. We illustrate our approach by simulating the spring migration of pectoral sandpipers from the Gulf of Mexico to Alaska. Mean stopover length and trajectory patterns are consistent with field observations.

Fire and birds in maritime Pacific Northwest

Treesearch

Mark H. Huff; Nathaniel E. Seavy; John D. Alexander; C. John Ralph

2005-01-01

Resource managers face the challenge of understanding how numerous factors, including fire and fire suppression, influence habitat composition and animal communities. We summarize information on fire effects on major vegetation types and bird/fire relations within the maritime Pacific Northwest, and pose management related questions and research considerations....

Nocturnal bird migration in opaque clouds

NASA Technical Reports Server (NTRS)

Griffin, D. R.

1972-01-01

The use of a tracking radar to measure the flight paths of migrating birds on nights with opaque clouds is discussed. The effects of wind and lack of visual references are examined. The limitations of the radar observations are described, and samples of tracks obtained during radar observations are included. It is concluded that nonvisual mechanisms of orientation make it possible for birds to migrate in opaque clouds, but the exact nature of the sensory information cannot be determined by radar observations.

Complete Genome Sequence of an Avian Paramyxovirus Type 4 Strain Isolated from Domestic Duck at a Live Bird Market in South Korea.

PubMed

Tseren-Ochir, Erdene-Ochir; Yuk, Seong-Su; Kwon, Jung-Hoon; Noh, Jin-Yong; Hong, Woo-Tack; Jeong, Jei-Hyun; Jeong, Sol; Kim, Yu-Jin; Kim, Kyu-Jik; Lee, Ji-Ho; Kim, Jun-Beom; Lee, Joong-Bok; Park, Seung-Yong; Choi, In-Soo; Lee, Sang-Won; Song, Chang-Seon

2017-05-18

We report here the first full-genome sequence of an avian paramyxovirus type 4 (APMV-4) strain isolated from a domestic mallard duck at a live bird market in South Korea. Phylogenetic analyses provide genetic information on a new genetic clade, APMV-4, isolated from a domestic duck and evidence of APMV-4 exchange between poultry and wild birds. Copyright © 2017 Tseren-Ochir et al.

Study of Bird Ingestions into Small Inlet Area Aircraft Turbine Engines

DTIC Science & Technology

1990-12-01

engines (ALF502, TFE731 , TPE331, and JTI5D) included in the study. This includes 24 months of operations for the first three engines and 12 months of...through the National Teclical Bird Ingestion- TFE731 Information Service, Springfield, 4 Tuibine Engine,’ TPt331 Virginia 22161 Turbofan Engine...ALF502 Engine 7 2.2 Operations, TFE731 Engine 8 2.3 Operations, TPE331 Engine 9 3.1 Distribution of Bird Weights 13 3.2 Aircraft Ingestions by Month

WHOI Hawaii Ocean Timeseries Station (WHOTS): WHOTS-4 2007 Mooring Turnaround Cruise Report

DTIC Science & Technology

2008-01-01

a physical deterrence for pest birds and their accompanying guano deposition (Figure 7). The anti-bird wire is constructed of 316 stainless steel ...AutoIMET system installation on the Kilo Moana.................................................................8 Fig 6. WHOTS-4 mooring diagram ...buoyancy is lost. 11 Figure 6. WHOTS-4 mooring diagram . 12 b. Bird Barrier WHOTS-4 incorporates Nixalite Premium Bird Barrier Strips Model S as

Crow deaths as a sentinel surveillance system for West Nile virus in the northeastern United States, 1999

USGS Publications Warehouse

Eidson, M.; Komar, N.; Sorhage, F.; Nelson, R.; Talbot, T.; Mostashari, F.; McLean, R.; ,

2001-01-01

In addition to human encephalitis and meningitis cases, the West Nile (WN) virus outbreak in the summer and fall of 1999 in New York State resulted in bird deaths in New York, New Jersey, and Connecticut. From August to December 1999, 295 dead birds were laboratory-confirmed with WN virus infection; 262 (89%) were American Crows (Corvus brachyrhynchos). The New York State Department of Health received reports of 17,339 dead birds, including 5,697 (33%) crows; in Connecticut 1,040 dead crows were reported. Bird deaths were critical in identifying WN virus as the cause of the human outbreak and defining its geographic and temporal limits. If established before a WN virus outbreak, a surveillance system based on bird deaths may provide a sensitive method of detecting WN virus.

Prevalence of coccidiosis among village and exotic breed of chickens in Maiduguri, Nigeria

PubMed Central

Lawal, Jallailudeen Rabana; Jajere, Saleh Mohammed; Ibrahim, Umar Isa; Geidam, Yaqub Ahmed; Gulani, Isa Adamu; Musa, Gambo; Ibekwe, Benjamin U.

2016-01-01

Aim: Coccidiosis is an important enteric parasitic disease of poultry associated with significant economic losses to poultry farmers worldwide. This survey was conducted from June 2014 through July 2015 with the main goal of investigating the prevalence and associated risk factors of coccidiosis among village and exotic breeds of chickens in Maiduguri, Northeastern Nigeria. Materials and Methods: A total of 600 fecal samples from live and slaughtered birds comprising 284 young, 141, growers and 175 adult birds; 379 male and 221 female birds; 450 exotic and 150 local breeds of birds were randomly collected either as bird’s fresh droppings or cutting open an eviscerated intestine of slaughtered birds, while noting their age, sex, and breeds. Samples were analyzed using standard parasitological methods and techniques. Results: An overall prevalence rate of 31.8% (95% confidence interval: 28.07-35.52) was obtained. Higher prevalence rates were recorded in growing birds 58.9% (50.78-67.02), female birds 35.3% (29.00-41.60), exotic birds 42.4% (37.83-46.97), and broiler birds 68.7% (61.28-76.12). Similarly, higher infection rates were also observed among birds sampled from Mairi ward 66.7% (56.03-77.37), intensive management system 46.5% (41.61-51.39), and constructed local cages 54.0% (46.02-61.98). The difference in prevalence of coccidiosis among age groups, breeds, among exotic breeds, sampling sites, husbandry management systems, and litter management systems was statistically significant (<0.0001). However, no significant difference (p>0.05) of infection rates was observed in sex. Conclusion: Coccidiosis is endemic in both commercial and backyard poultry farms in Maiduguri due to poor management practices encouraging Eimeria oocysts build-up. It is therefore, recommended that poultry farmers should practice strict biosecurity measures on their farms, creating awareness on the prevalence of coccidiosis, routine vaccination against coccidiosis and educating poultry farmers on the need for maintaining good hygienic standards and good flock health management. PMID:27397991

Long distance tracking of birds

NASA Technical Reports Server (NTRS)

Cochran, W. W.

1972-01-01

The application of radio telemetry techniques to the long distance tracking of birds is discussed. The types of equipment developed and methods for attachment to a bird are described. The operating range of the radio transmitter receiver system is examined, and methods for acquiring and analyzing the data are explained.

UAS-based automatic bird count of a common gull colony

NASA Astrophysics Data System (ADS)

Grenzdörffer, G. J.

2013-08-01

The standard procedure to count birds is a manual one. However a manual bird count is a time consuming and cumbersome process, requiring several people going from nest to nest counting the birds and the clutches. High resolution imagery, generated with a UAS (Unmanned Aircraft System) offer an interesting alternative. Experiences and results of UAS surveys for automatic bird count of the last two years are presented for the bird reserve island Langenwerder. For 2011 1568 birds (± 5%) were detected on the image mosaic, based on multispectral image classification and GIS-based post processing. Based on the experiences of 2011 the results and the accuracy of the automatic bird count 2012 became more efficient. For 2012 1938 birds with an accuracy of approx. ± 3% were counted. Additionally a separation of breeding and non-breeding birds was performed with the assumption, that standing birds cause a visible shade. The final section of the paper is devoted to the analysis of the 3D-point cloud. Thereby the point cloud was used to determine the height of the vegetation and the extend and depth of closed sinks, which are unsuitable for breeding birds.

The ecology and evolution of avian alarm call signaling systems

NASA Astrophysics Data System (ADS)

Billings, Alexis Chandon

Communication is often set up as a simple dyadic exchange between one sender and one receiver. However, in reality, signaling systems have evolved and are used with many forms and types of information bombarding multiple senders, who in turn send multiple signals of different modalities, through various environmental spaces, finally reaching multiple receivers. In order to understand both the ecology and evolution of a signaling system, we must examine all the facets of the signaling system. My dissertation focused on the alarm call signaling system in birds. Alarm calls are acoustic signals given in response to danger or predators. My first two chapters examine how information about predators alters alarm calls. In chapter one I found that chickadees make distinctions between predators of different hunting strategies and appear to encode information about predators differently if they are heard instead of seen. In my second chapter, I test these findings more robustly in a non-model bird, the Steller's jay. I again found that predator species matters, but that how Steller's jays respond if they saw or heard the predator depends on the predator species. In my third chapter, I tested how habitat has influenced the evolution of mobbing call acoustic structure. I found that habitat is not a major contributor to the variation in acoustic structure seen across species and that other selective pressures such as body size may be more important. In my fourth chapter I present a new framework to understand the evolution of multimodal communication across species. I identify a unique constraint, the need for overlapping sensory systems, thresholds and cognitive abilities between sender and receiver in order for different forms of interspecific communication to evolve. Taken together, these chapters attempt to understand a signaling system from both an ecological and evolutionary perspective by examining each piece of the communication scheme.

Importance of Carolina Bays to the Avifauna of Pinelands in the Southeastern United States.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Czapka, Stephen, J.; Kilgo, John, C.

2011-07-01

Abstract - Past anthropogenic activity has led to the destruction or alteration of Carolina bay wetlands throughout the southeastern United States. Presently, urban development, combined with a 2001 ruling by the US Supreme Court relaxing protection of isolated wetlands, poses an increasing threat to these and other isolated wetland systems; however, little information exists on the importance of these wetland systems to birds. We compared breeding and wintering bird communities of upland pine (Pinus spp.) forests with and without Carolina bays. Estimated species richness was greater in pine forests with Carolina bays than without during the winter (31.7 ± 1.3more » [mean ± SE] vs. 26.9 ± 1.2; P = 0.027), but not in the breeding season (27.9 ± 2.2 vs. 26.3 ± 2.2; P = 0.644). Total relative abundance did not differ between pine forests with Carolina bays and those without in either the breeding (148.0 ± 16.0 vs. 129.4 ± 10.4 birds/40 ha; P = 0.675) or winter (253.0 ± 36.4 vs. 148.8 ± 15.1 birds/40 ha; P = 0.100) seasons. However, 23 species, 43% of which were wetland-dependent, were observed only in pine forests with bays during the breeding season, and 20 species, 30% of which were wetland-dependent, were observed only in such sites during winter. In contrast, only 6 and 1 species were observed only in pine forests without bays during the breeding and winter seasons, respectively, indicating that few species were negatively affected by the presence of bays. Thus, Carolina bays appear to enrich the avifauna of pine forests in the southeastern United States.« less

50 CFR 15.23 - Permits for zoological breeding or display programs.

Code of Federal Regulations, 2012 CFR

2012-10-01

... education protocol that provides information on educational materials on the ecology and/or conservation... self-sustaining population of the exotic bird species in captivity; (iii) A statement on efforts to... the population from which the exotic bird was or would be removed; (4) Whether the breeding or display...

50 CFR 15.23 - Permits for zoological breeding or display programs.

Code of Federal Regulations, 2014 CFR

2014-10-01

... education protocol that provides information on educational materials on the ecology and/or conservation... self-sustaining population of the exotic bird species in captivity; (iii) A statement on efforts to... the population from which the exotic bird was or would be removed; (4) Whether the breeding or display...

50 CFR 15.23 - Permits for zoological breeding or display programs.

Code of Federal Regulations, 2013 CFR

2013-10-01

... education protocol that provides information on educational materials on the ecology and/or conservation... self-sustaining population of the exotic bird species in captivity; (iii) A statement on efforts to... the population from which the exotic bird was or would be removed; (4) Whether the breeding or display...

A western state perspective on monitoring and managing neotropical migratory birds

Treesearch

Frank Howe

1993-01-01

Neotropical migratory bird monitoring programs can contribute greatly to a more holistic and proactive management approach for state agencies. It is, however, imperative that these monitoring programs be scientifically designed and clearly communicated to managers. Information from monitoring programs can be used to develop multiple-species habitat management...

77 FR 41442 - Agency Information Collection Activities: Comment Request

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-13

... (ICR) to renew approval of the paperwork requirements for ``Bird Banding Lab (4 USGS forms).'' This..., (3) The Bird Banding Recovery Report, and one electronic database, Bandit. We will protect... its implementing regulations (43 CFR part 2), and under regulations at 30 CFR 250.197, ``Data and...

Bird and bat predation services in tropical forests and agroforestry landscapes.

PubMed

Maas, Bea; Karp, Daniel S; Bumrungsri, Sara; Darras, Kevin; Gonthier, David; Huang, Joe C-C; Lindell, Catherine A; Maine, Josiah J; Mestre, Laia; Michel, Nicole L; Morrison, Emily B; Perfecto, Ivette; Philpott, Stacy M; Şekercioğlu, Çagan H; Silva, Roberta M; Taylor, Peter J; Tscharntke, Teja; Van Bael, Sunshine A; Whelan, Christopher J; Williams-Guillén, Kimberly

2016-11-01

Understanding distribution patterns and multitrophic interactions is critical for managing bat- and bird-mediated ecosystem services such as the suppression of pest and non-pest arthropods. Despite the ecological and economic importance of bats and birds in tropical forests, agroforestry systems, and agricultural systems mixed with natural forest, a systematic review of their impact is still missing. A growing number of bird and bat exclosure experiments has improved our knowledge allowing new conclusions regarding their roles in food webs and associated ecosystem services. Here, we review the distribution patterns of insectivorous birds and bats, their local and landscape drivers, and their effects on trophic cascades in tropical ecosystems. We report that for birds but not bats community composition and relative importance of functional groups changes conspicuously from forests to habitats including both agricultural areas and forests, here termed 'forest-agri' habitats, with reduced representation of insectivores in the latter. In contrast to previous theory regarding trophic cascade strength, we find that birds and bats reduce the density and biomass of arthropods in the tropics with effect sizes similar to those in temperate and boreal communities. The relative importance of birds versus bats in regulating pest abundances varies with season, geography and management. Birds and bats may even suppress tropical arthropod outbreaks, although positive effects on plant growth are not always reported. As both bats and birds are major agents of pest suppression, a better understanding of the local and landscape factors driving the variability of their impact is needed. © 2015 Cambridge Philosophical Society.

Cost-benefit trade-offs of bird activity in apple orchards

PubMed Central

Saunders, Manu E.; Luck, Gary W.

2016-01-01

Birds active in apple orchards in south–eastern Australia can contribute positively (e.g., control crop pests) or negatively (e.g., crop damage) to crop yields. Our study is the first to identify net outcomes of these activities, using six apple orchards, varying in management intensity, in south–eastern Australia as a study system. We also conducted a predation experiment using real and artificial codling moth (Cydia pomonella) larvae (a major pest in apple crops). We found that: (1) excluding birds from branches of apple trees resulted in an average of 12.8% more apples damaged by insects; (2) bird damage to apples was low (1.9% of apples); and (3) when trading off the potential benefits (biological control) with costs (bird damage to apples), birds provided an overall net benefit to orchard growers. We found that predation of real codling moth larvae was higher than for plasticine larvae, suggesting that plasticine prey models are not useful for inferring actual predation levels. Our study shows how complex ecological interactions between birds and invertebrates affect crop yield in apples, and provides practical strategies for improving the sustainability of orchard systems. PMID:27413639

Resurgence of HPAI in birds and mechanisms of transmission

USDA-ARS?s Scientific Manuscript database

High pathogenicity avian influenza (HPAI) viruses typically produce a similar severe, systemic disease with high mortality in chickens and other gallinaceous birds, but either no disease or only mild disease in domestic ducks and wild birds. However with emergence of H5N1 HPAI viruses and their mai...

The Harvest and Management of Migratory Bird Eggs by Inuit in Nunatsiavut, Labrador

NASA Astrophysics Data System (ADS)

Natcher, David; Felt, Larry; Chaulk, Keith; Procter, Andrea

2012-12-01

This paper presents the results of collaborative research conducted in 2007 on the harvest of migratory bird eggs by Inuit households of Nunatsiavut, Labrador. Harvest variability between communities and species is examined, as is the social and ecological factors affecting the 2007 Inuit egg harvest. Representing the first comprehensive account of Inuit egg use in Labrador, this information should be valuable to agencies responsible for managing migratory bird populations in North America and will contribute to a more informed understanding of the complexity and temporal variability in subsistence harvesting among Labrador Inuit. It is argued that the recognition of this complexity will be critical as the Nunatsiavut Government and other wildlife management agencies formulate management policies that are supportive rather, than constraining, to Inuit resource use in the future.

Taste-active compound levels in Korean native chicken meat: The effects of bird age and the cooking process.

PubMed

Jayasena, Dinesh D; Jung, Samooel; Kim, Hyun Joo; Yong, Hae In; Nam, Ki Chang; Jo, Cheorun

2015-08-01

The effects of bird age and the cooking process on the levels of several taste-active compounds, including inosine 5'-monophosphate (IMP), glutamic acid, cysteine, reducing sugars, as well as oleic, linoleic, arachidonic, and docosahexaenoic acids (DHA), in the breast and leg meats from a certified meat-type commercial Korean native chicken (KNC) strain (Woorimatdag) were investigated. KNC cocks were raised under similar standard conditions at a commercial chicken farm, and breast and leg meats from birds of various ages (10, 11, 12, 13, and 14 wk; 10 birds/age group) were obtained. After raw and cooked meat samples were prepared, they were analyzed for the aforementioned taste-active compounds. Compared to the leg meat, KNC breast meat had higher levels of IMP, arachidonic acid, and DHA, but lower levels of the other taste-active compounds (P < 0.05). KNC meat lost significant amounts of all the taste-active compounds, excluding oleic and linoleic acids, during the cooking process (P < 0.05). However, bird age only had a minor effect on the levels of these taste-active compounds. The results of this study provide useful information regarding the levels of taste-active compounds in KNC meat from birds of different ages, and their fate during the cooking process. This information could be useful for selection and breeding programs, and for popularizing native chicken meat. © 2015 Poultry Science Association Inc.

Raptors of the Hanford Site and nearby areas of southcentral Washington

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fitzner, R.E.; Rickard, W.H.; Cadwell, L.L.

1981-05-01

This report is concerned with the birds of prey which use the Hanford Site not only during the nesting season but throughout the year. An ecological treatment of five nesting owls (great horned, long-eared, short-eared, barn and burrowing) and five nesting hawks (marsh hawk, red-tailed hawk, Swainson's hawk, prairie falcon and American kestrel) is provided and supportive information on non-nesting species is presented. Factors which control raptor densities and population dynamics throughout all seasons of the year are discussed. Information is also provided for raptors from other areas of southcentral Washington in order to yield a comprehensive picture of howmore » the Hanford Site fits in with regional bird of prey populations. The following were the objectives of this study: (1) to determine the numbers of birds of prey nesting on the Hanford Site, (2) to document the reproductive chronology of each nesting raptor species, (3) to provide analyses of food habits of birds of prey on the Hanford Site coupled with prey abundance data, (4) to determine the productivity of the dominant large birds of prey on the Hanford Site, (5) to determine the distribution and land use patterns of all raptors on the Hanford Site, (6) to determine the kinds and relative abundance of non-nesting raptors on the Hanford Site and adjacent areas of southcentral Washington (7) to document present land use practices on the Hanford Site and their effects on raptors, (8) to document radionuclide levels in birds of prey on the Hanford Site, and (9) to determine the role of birds of prey in radioecological monitoring.« less

Climate change: potential implications for Ireland's biodiversity

NASA Astrophysics Data System (ADS)

Donnelly, Alison

2018-03-01

A national biodiversity and climate change adaptation plan is being developed for Ireland by the Department of Communications, Climate Action, and Environment. In order to inform such a plan, it was necessary to review and synthesize some of the recent literature pertaining to the impact of climate change on biodiversity in Ireland. Published research on this topic fell within three broad categories: (i) changes in the timing of life-cycle events (phenology) of plants, birds, and insects; (ii) changes in the geographic range of some bird species; and (iii) changes in the suitable climatic zones of key habitats and species. The synthesis revealed evidence of (i) a trend towards earlier spring activity of plants, birds, and insects which may result in a change in ecosystem function; (ii) an increase in the number of bird species; and (iii) both increases and decreases in the suitable climatic area of key habitats and species, all of which are expected to impact Ireland's future biodiversity. This process identified data gaps and limitations in available information both of which could be used to inform a focused research strategy. In addition, it raises awareness of the potential implications of climate change for biodiversity in Ireland and elsewhere and demonstrates the need for biodiversity conservation plans to factor climate change into future designs.

Climate change: potential implications for Ireland's biodiversity.

PubMed

Donnelly, Alison

2018-03-12

A national biodiversity and climate change adaptation plan is being developed for Ireland by the Department of Communications, Climate Action, and Environment. In order to inform such a plan, it was necessary to review and synthesize some of the recent literature pertaining to the impact of climate change on biodiversity in Ireland. Published research on this topic fell within three broad categories: (i) changes in the timing of life-cycle events (phenology) of plants, birds, and insects; (ii) changes in the geographic range of some bird species; and (iii) changes in the suitable climatic zones of key habitats and species. The synthesis revealed evidence of (i) a trend towards earlier spring activity of plants, birds, and insects which may result in a change in ecosystem function; (ii) an increase in the number of bird species; and (iii) both increases and decreases in the suitable climatic area of key habitats and species, all of which are expected to impact Ireland's future biodiversity. This process identified data gaps and limitations in available information both of which could be used to inform a focused research strategy. In addition, it raises awareness of the potential implications of climate change for biodiversity in Ireland and elsewhere and demonstrates the need for biodiversity conservation plans to factor climate change into future designs.

Avian paternal care had dinosaur origin.

PubMed

Varricchio, David J; Moore, Jason R; Erickson, Gregory M; Norell, Mark A; Jackson, Frankie D; Borkowski, John J

2008-12-19

The repeated discovery of adult dinosaurs in close association with egg clutches leads to speculation over the type and extent of care exhibited by these extinct animals for their eggs and young. To assess parental care in Cretaceous troodontid and oviraptorid dinosaurs, we examined clutch volume and the bone histology of brooding adults. In comparison to four archosaur care regressions, the relatively large clutch volumes of Troodon, Oviraptor, and Citipati scale most closely with a bird-paternal care model. Clutch-associated adults lack the maternal and reproductively associated histologic features common to extant archosaurs. Large clutch volumes and a suite of reproductive features shared only with birds favor paternal care, possibly within a polygamous mating system. Paternal care in both troodontids and oviraptorids indicates that this care system evolved before the emergence of birds and represents birds' ancestral condition. In extant birds and over most adult sizes, paternal and biparental care correspond to the largest and smallest relative clutch volumes, respectively.

Mapping surface disturbance of energy-related infrastructure in southwest Wyoming--An assessment of methods

USGS Publications Warehouse

Germaine, Stephen S.; O'Donnell, Michael S.; Aldridge, Cameron L.; Baer, Lori; Fancher, Tammy; McBeth, Jamie; McDougal, Robert R.; Waltermire, Robert; Bowen, Zachary H.; Diffendorfer, James; Garman, Steven; Hanson, Leanne

2012-01-01

We evaluated how well three leading information-extraction software programs (eCognition, Feature Analyst, Feature Extraction) and manual hand digitization interpreted information from remotely sensed imagery of a visually complex gas field in Wyoming. Specifically, we compared how each mapped the area of and classified the disturbance features present on each of three remotely sensed images, including 30-meter-resolution Landsat, 10-meter-resolution SPOT (Satellite Pour l'Observation de la Terre), and 0.6-meter resolution pan-sharpened QuickBird scenes. Feature Extraction mapped the spatial area of disturbance features most accurately on the Landsat and QuickBird imagery, while hand digitization was most accurate on the SPOT imagery. Footprint non-overlap error was smallest on the Feature Analyst map of the Landsat imagery, the hand digitization map of the SPOT imagery, and the Feature Extraction map of the QuickBird imagery. When evaluating feature classification success against a set of ground-truthed control points, Feature Analyst, Feature Extraction, and hand digitization classified features with similar success on the QuickBird and SPOT imagery, while eCognition classified features poorly relative to the other methods. All maps derived from Landsat imagery classified disturbance features poorly. Using the hand digitized QuickBird data as a reference and making pixel-by-pixel comparisons, Feature Extraction classified features best overall on the QuickBird imagery, and Feature Analyst classified features best overall on the SPOT and Landsat imagery. Based on the entire suite of tasks we evaluated, Feature Extraction performed best overall on the Landsat and QuickBird imagery, while hand digitization performed best overall on the SPOT imagery, and eCognition performed worst overall on all three images. Error rates for both area measurements and feature classification were prohibitively high on Landsat imagery, while QuickBird was time and cost prohibitive for mapping large spatial extents. The SPOT imagery produced map products that were far more accurate than Landsat and did so at a far lower cost than QuickBird imagery. Consideration of degree of map accuracy required, costs associated with image acquisition, software, operator and computation time, and tradeoffs in the form of spatial extent versus resolution should all be considered when evaluating which combination of imagery and information-extraction method might best serve any given land use mapping project. When resources permit, attaining imagery that supports the highest classification and measurement accuracy possible is recommended.

Collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure

USGS Publications Warehouse

Adams, Josh; Kelsey, Emily C.; Felis, Jonathan J.; Pereksta, David M.

2016-10-27

With growing climate change concerns and energy constraints, there is an increasing need for renewable energy sources within the United States and globally. Looking forward, offshore wind-energy infrastructure (OWEI) has the potential to produce a significant proportion of the power needed to reach our Nation’s renewable energy goal. Offshore wind-energy sites can capitalize open areas within Federal waters that have persistent, high winds with large energy production potential. Although there are few locations in the California Current System (CCS) where it would be acceptable to build pile-mounted wind turbines in waters less than 50 m deep, the development of technology able to support deep-water OWEI (>200 m depth) could enable wind-energy production in the CCS. As with all human-use of the marine environment, understanding the potential impacts of wind-energy infrastructure on the marine ecosystem is an integral part of offshore wind-energy research and planning. Herein, we present a comprehensive database to quantify marine bird vulnerability to potential OWEI in the CCS (see https://doi.org/10.5066/F79C6VJ0). These data were used to quantify marine bird vulnerabilities at the population level. For 81 marine bird species present in the CCS, we created three vulnerability indices: Population Vulnerability, Collision Vulnerability, and Displacement Vulnerability. Population Vulnerability was used as a scaling factor to generate two comprehensive indicies: Population Collision Vulnerability (PCV) and Population Displacement Vulnerability (PDV). Within the CCS, pelicans, terns (Forster’s [Sterna forsteri], Caspian [Hydroprogne caspia], Elegant [Thalasseus elegans], and Least Tern [Sternula antillarum]), gulls (Western [Larus occidentalis] and Bonaparte’s Gull [Chroicocephalus philadelphia]), South Polar Skua (Stercorarius maccormicki), and Brandt’s Cormorant (Phalacrocorax penicillatus) had the greatest PCV scores. Brown Pelican (Pelicanus occidentalis) had the greatest overall PCV score. Some alcids (Scripps’s Murrelet [Synthliboramphus scrippsi], Marbled Murrelet [Brachyramphus marmoratus], and Tufted Puffin [Fratercula cirrhata]), terns (Elegant and Least Lern), and loons (Yellow-billed [Gavia adamsii] and Common Loon [G. immer]) had the greatest PDV scores. Ashy Storm-Petrel (Oceanodroma homochroa) had the greatest overall PDV score. To help inform decisions that will impact seabird conservation, vulnerability assessment results can now be combined with recent marine bird at-sea distribution and abundance data for the CCS to evaluate vulnerability areas where OWEI development is being considered. Lastly, it is important to note that as new information about seabird behavior and populations in the CCS becomes available, this database can be easily updated and modified.

Ecology and phylogeny of birds foraging at outdoor restaurants in Sweden

PubMed Central

Sjöstedt de Luna, Sara; Blank, Henrick; Lundqvist, Henrik

2015-01-01

Abstract Background Birds frequently visit the outdoor serving areas of restaurants to feed on scraps of food and leftovers. Although this feeding association between humans and birds is widespread and could have significant effects, both positive and negative, for all taxa involved, the authors know of no published studies that have investigated restaurant bird communities. To lay the foundation for future research, the authors conducted a basic study of birds at 80 outdoor restaurants in Sweden, identifying which species and taxonomic clades of birds visited the restaurants and comparing restaurant birds in urban and rural environments. New information Thirteen species of birds visited the outdoor restaurants. Eight of these species were predominant, i.e. accounting for 51% or more of bird presence (sum of minutes of all individual birds) at one or more restaurants. Every restaurant studied had a predominant species, but species often differed from each other in frequency of predominance in different landscapes. No endangered species were seen visiting restaurants. However, three farmland bird species (House Sparrow Passer domesticus, White Wagtail Motacilla alba, Eurasian Tree Sparrow Passer montanus), whose numbers are reported to be declining in the countryside, were predominant at the majority of restaurants in rural areas, suggesting that rural restaurants might be able to contribute to the conservation of these species. The thirteen species of restaurant-visiting birds belonged to five monophyletic clades. Ninety percent of all restaurants had, as their predominant species, birds from either Clade A (Passeridae, Motacillidae, Fringillidae) or Clade C (Corvidae). Statistical testing revealed that Clade A and Clade C were distributed differently in environments along the urban-rural gradient. At all spatial scales measured, birds of Clade C were predominant at the majority of restaurants in urban areas, while birds of Clade A were the predominant clade at the majority of restaurants in rural areas. The authors use this evidence, and observations of birds foraging in association with other primates, to hypothesize that the outdoor serving areas of modern restaurants may be helping to preserve and nurture ancient human-bird symbioses that have been part of human ecology since antiquity. PMID:26491395

Re-calibration of the magnetic compass in hand-raised European robins (Erithacus rubecula)

PubMed Central

Alert, Bianca; Michalik, Andreas; Thiele, Nadine; Bottesch, Michael; Mouritsen, Henrik

2015-01-01

Migratory birds can use a variety of environmental cues for orientation. A primary calibration between the celestial and magnetic compasses seems to be fundamental prior to a bird’s first autumn migration. Releasing hand-raised or rescued young birds back into the wild might therefore be a problem because they might not have established a functional orientation system during their first calendar year. Here, we test whether hand-raised European robins that did not develop any functional compass before or during their first autumn migration could relearn to orient if they were exposed to natural celestial cues during the subsequent winter and spring. When tested in the geomagnetic field without access to celestial cues, these birds could orient in their species-specific spring migratory direction. In contrast, control birds that were deprived of any natural celestial cues throughout remained unable to orient. Our experiments suggest that European robins are still capable of establishing a functional orientation system after their first autumn. Although the external reference remains speculative, most likely, natural celestial cues enabled our birds to calibrate their magnetic compass. Our data suggest that avian compass systems are more flexible than previously believed and have implications for the release of hand-reared migratory birds. PMID:26388258

Seasonal diets of insectivorous birds using canopy gaps in a bottomland forest.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moorman, Christopher, E.; Bowen, Liessa, T.; Kilgo, John, C.

2007-07-01

ABSTRACT. Little is known about how insectivorous bird diets are influenced by arthropod availability and about how these relationships vary seasonally. We captured birds in forest-canopy gaps and adjacent mature forest during 2001 and 2002 at the Savannah River Site in Barnwell County, South Carolina, and flushed their crops to gather information about arthropods eaten during four periods: spring migration, breeding, postbreeding, and fall migration. Arthropod availability for foliage- and ground-gleaning birds was examined by leaf clipping and pitfall trapping. Coleopterans and Hemipterans were used by foliage- and ground-gleaners more than expected during all periods, whereas arthropods in the ordersmore » Araneae and Hymenoptera were used as, or less than, expected based on availability during all periods. Ground-gleaning birds used Homopterans and Lepidopterans in proportions higher than availability during all periods. Arthropod use by birds was consistent from spring through all migration, with no apparent seasonal shift in diet. Based on concurrent studies, heavily used orders of arthropods were equally abundant or slightly less abundant in canopy gaps than in the surrounding mature forest, but bird species were most frequently detected in gaps. Such results suggest that preferential feeding on arthropods by foliage-gleaning birds in p p habitats reduced arthropod densities or, alternatively, that bird use of gap and forest habitat was not determined y food resources. The abundance of arthropods across the stand may have allowed birds to remain in the densely vegetated gaps where thick cover provides protection from predators.« less

Characterizing wild bird contact and seropositivity to highly pathogenic avian influenza A (H5N1) virus in Alaskan residents

PubMed Central

Reed, Carrie; Bruden, Dana; Byrd, Kathy K; Veguilla, Vic; Bruce, Michael; Hurlburt, Debby; Wang, David; Holiday, Crystal; Hancock, Kathy; Ortiz, Justin R; Klejka, Joe; Katz, Jacqueline M; Uyeki, Timothy M

2014-01-01

Background Highly pathogenic avian influenza A (HPAI) H5N1 viruses have infected poultry and wild birds on three continents with more than 600 reported human cases (59% mortality) since 2003. Wild aquatic birds are the natural reservoir for avian influenza A viruses, and migratory birds have been documented with HPAI H5N1 virus infection. Since 2005, clade 2.2 HPAI H5N1 viruses have spread from Asia to many countries. Objectives We conducted a cross-sectional seroepidemiological survey in Anchorage and western Alaska to identify possible behaviors associated with migratory bird exposure and measure seropositivity to HPAI H5N1. Methods We enrolled rural subsistence bird hunters and their families, urban sport hunters, wildlife biologists, and a comparison group without bird contact. We interviewed participants regarding their exposures to wild birds and collected blood to perform serologic testing for antibodies against a clade 2.2 HPAI H5N1 virus strain. Results Hunters and wildlife biologists reported exposures to wild migratory birds that may confer risk of infection with avian influenza A viruses, although none of the 916 participants had evidence of seropositivity to HPAI H5N1. Conclusions We characterized wild bird contact among Alaskans and behaviors that may influence risk of infection with avian influenza A viruses. Such knowledge can inform surveillance and risk communication surrounding HPAI H5N1 and other influenza viruses in a population with exposure to wild birds at a crossroads of intercontinental migratory flyways. PMID:24828535

The figs of winter: Seasonal importance of fruiting fig trees (Ficus: Moraceae) for urban birds

NASA Astrophysics Data System (ADS)

Walther, Bruno A.; Geier, Jessica; Chou, Lien-Siang; Bain, Anthony

2018-07-01

Birds and figs are conspicuous members of the tropical and subtropical ecosystems. Because they are easily observed and very speciose, their relationships have been well studied in many areas, and the figs are considered a keystone resource for many bird species which are efficient fig seed dispersers. Taiwan has a relatively high endemism rate for many taxa (17% of bird species) but because of its high human population density, most lowland habitats are heavily developed, of which much of it covered by dense urban habitation. To establish the importance of urban figs for birds, we focused our surveys mostly on three common urban fig species (Ficus caulocarpa, F. microcarpa and F. subpisocarpa). We observed trees with ripening figs from July 2013 to December 2016 in order to determine the composition of the fig-consuming bird community. In addition, we added all the information available in the scientific literature and birdwatchers' observations which we could find. In total, we observed 42 bird species consuming 18 fig species. The bird diversity in urban areas was non-negligible even during winter. Therefore, there are two reasons why figs are important for Taiwan's bird avifauna: in cities, the tree diversity is generally low so that figs provide a stable food resource; and since figs are fruiting all year-round, they are one of the few reliable resources available during winter when many migrant birds overwinter in Taiwan. Already crucial for many species in tropical and subtropical forests, fig trees may also be essential for urban birds in tropical and subtropical regions.

Stereo-Optic High Definition Imaging: A New Technology to Understand Bird and Bat Avoidance of Wind Turbines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adams, Evan; Goodale, Wing; Burns, Steve

There is a critical need to develop monitoring tools to track aerofauna (birds and bats) in three dimensions around wind turbines. New monitoring systems will reduce permitting uncertainty by increasing the understanding of how birds and bats are interacting with wind turbines, which will improve the accuracy of impact predictions. Biodiversity Research Institute (BRI), The University of Maine Orono School of Computing and Information Science (UMaine SCIS), HiDef Aerial Surveying Limited (HiDef), and SunEdison, Inc. (formerly First Wind) responded to this need by using stereo-optic cameras with near-infrared (nIR) technology to investigate new methods for documenting aerofauna behavior around windmore » turbines. The stereo-optic camera system used two synchronized high-definition video cameras with fisheye lenses and processing software that detected moving objects, which could be identified in post-processing. The stereo- optic imaging system offered the ability to extract 3-D position information from pairs of images captured from different viewpoints. Fisheye lenses allowed for a greater field of view, but required more complex image rectification to contend with fisheye distortion. The ability to obtain 3-D positions provided crucial data on the trajectory (speed and direction) of a target, which, when the technology is fully developed, will provide data on how animals are responding to and interacting with wind turbines. This project was focused on testing the performance of the camera system, improving video review processing time, advancing the 3-D tracking technology, and moving the system from Technology Readiness Level 4 to 5. To achieve these objectives, we determined the size and distance at which aerofauna (particularly eagles) could be detected and identified, created efficient data management systems, improved the video post-processing viewer, and attempted refinement of 3-D modeling with respect to fisheye lenses. The 29-megapixel camera system successfully captured 16,173 five-minute video segments in the field. During nighttime field trials using nIR, we found that bat-sized objects could not be detected more than 60 m from the camera system. This led to a decision to focus research efforts exclusively on daytime monitoring and to redirect resources towards improving the video post- processing viewer. We redesigned the bird event post-processing viewer, which substantially decreased the review time necessary to detect and identify flying objects. During daytime field trials, we determine that eagles could be detected up to 500 m away using the fisheye wide-angle lenses, and eagle-sized targets could be identified to species within 350 m of the camera system. We used distance sampling survey methods to describe the probability of detecting and identifying eagles and other aerofauna as a function of distance from the system. The previously developed 3-D algorithm for object isolation and tracking was tested, but the image rectification (flattening) required to obtain accurate distance measurements with fish-eye lenses was determined to be insufficient for distant eagles. We used MATLAB and OpenCV to improve fisheye lens rectification towards the center of the image, but accurate measurements towards the image corners could not be achieved. We believe that changing the fisheye lens to rectilinear lens would greatly improve position estimation, but doing so would result in a decrease in viewing angle and depth of field. Finally, we generated simplified shape profiles of birds to look for similarities between unknown animals and known species. With further development, this method could provide a mechanism for filtering large numbers of shapes to reduce data storage and processing. These advancements further refined the camera system and brought this new technology closer to market. Once commercialized, the stereo-optic camera system technology could be used to: a) research how different species interact with wind turbines in order to refine collision risk models and inform mitigation solutions; and b) monitor aerofauna interactions with terrestrial and offshore wind farms replacing costly human observers and allowing for long-term monitoring in the offshore environment. The camera system will provide developers and regulators with data on the risk that wind turbines present to aerofauna, which will reduce uncertainty in the environmental permitting process.« less

Avian reproductive physiology

USGS Publications Warehouse

Gee, G.F.; Gibbons, Edward F.; Durrant, Barbara S.; Demarest, Jack

1995-01-01

Knowledge of the many physiological factors associated with egg production , fertility, incubation, and brooding in nondomestic birds is limited. Science knows even less about reproduction in most of the 238 endangered or threatened birds. This discussion uses studies of nondomestic and, when necessary, domestic birds to describe physiological control of reproduction. Studies of the few nondomestic avian species show large variation in physiological control of reproduction. Aviculturists, in order to successfully propagate an endangered bird, must understand the bird's reproductive peculiarities. First, investigators can do studies with carefully chosen surrogate species, but eventually they need to confirm the results in the target endangered bird. Studies of reproduction in nondomestic birds increased in the last decade. Still, scientists need to do more comparative studies to understand the mechanisms that control reproduction in birds. New technologies are making it possible to study reproductive physiology of nondomestic species in less limiting ways. These technologies include telemetry to collect information without inducing stress on captives (Howey et al., 1987; Klugman, 1987), new tests for most of the humoral factors associated with reproduction, and the skill to collect small samples and manipulate birds without disrupting the physiological mechanisms (Bercovitz et al., 1985). Managers are using knowledge from these studies to improve propagation in zoological parks, private and public propagation facilities, and research institutions. Researchers need to study the control of ovulation, egg formation, and oviposition in the species of nondomestic birds that lay very few eggs in a season, hold eggs in the oviduct for longer intervals, or differ in other ways from the more thoroughly studied domestic birds. Other techniques that would enhance propagation for nondomestlc birds include tissue culture of cloned embryonic cells, cryopreservation of embryos and gametes, embryo transplant, DNA analysis and manipulation, disease screening and control, and improved release conditioning methods.

Chewing lice from wild birds in northern Greece.

PubMed

Diakou, Anastasia; Pedroso Couto Soares, José Bernardo; Alivizatos, Haralambos; Panagiotopoulou, Maria; Kazantzidis, Savas; Literák, Ivan; Sychra, Oldřich

2017-10-01

Greece represents an important area for wild birds due to its geographical position and habitat diversity. Although the bird species in Greece are well recorded, the information about the chewing lice that infest them is practically non-existent. Thus, the aim of the present study was to record the species of lice infesting wild birds in northern Greece and furthermore, to associate the infestation prevalence with factors such as the age, sex, migration and social behaviour of the host as well as the time of the year. In total 729 birds, (belonging to 9 orders, 32 families and 68 species) were examined in 7 localities of northern Greece, during 9 ringing sessions from June 2013 until October 2015. Eighty (11%) of the birds were found to be infested with lice. In 31 different bird species, 560 specimens of lice, belonging to 33 species were recorded. Mixed infestations were recorded in 11 cases where birds were infested with 2-3 different lice species. Four new host-parasite associations were recorded i.e. Menacanthus curuccae from Acrocephalus melanopogon, Menacanthus agilis from Cettia cetti, Myrsidea sp. from Acrocephalus schoenobaenus, and Philopretus citrinellae from Spinus spinus. Moreover, Menacanthus sinuatus was detected on Poecile lugubris, rendering this report the first record of louse infestation in this bird species. The statistical analysis of the data collected showed no association between parasitological parameters (prevalence, mean and median intensity and mean abundance) in two different periods of the year (breeding vs post-breeding season). However, there was a statistically significant difference in the prevalence of infestation between a) migrating and sedentary passerine birds (7.4% vs 13.2%), b) colonial and territorial birds (54.5% vs 9.6%), and c) female and male birds in breeding period (2.6% vs 15.6%). Copyright © 2017. Published by Elsevier B.V.

Automated Thermal Image Processing for Detection and Classification of Birds and Bats - FY2012 Annual Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duberstein, Corey A.; Matzner, Shari; Cullinan, Valerie I.

Surveying wildlife at risk from offshore wind energy development is difficult and expensive. Infrared video can be used to record birds and bats that pass through the camera view, but it is also time consuming and expensive to review video and determine what was recorded. We proposed to conduct algorithm and software development to identify and to differentiate thermally detected targets of interest that would allow automated processing of thermal image data to enumerate birds, bats, and insects. During FY2012 we developed computer code within MATLAB to identify objects recorded in video and extract attribute information that describes the objectsmore » recorded. We tested the efficiency of track identification using observer-based counts of tracks within segments of sample video. We examined object attributes, modeled the effects of random variability on attributes, and produced data smoothing techniques to limit random variation within attribute data. We also began drafting and testing methodology to identify objects recorded on video. We also recorded approximately 10 hours of infrared video of various marine birds, passerine birds, and bats near the Pacific Northwest National Laboratory (PNNL) Marine Sciences Laboratory (MSL) at Sequim, Washington. A total of 6 hours of bird video was captured overlooking Sequim Bay over a series of weeks. An additional 2 hours of video of birds was also captured during two weeks overlooking Dungeness Bay within the Strait of Juan de Fuca. Bats and passerine birds (swallows) were also recorded at dusk on the MSL campus during nine evenings. An observer noted the identity of objects viewed through the camera concurrently with recording. These video files will provide the information necessary to produce and test software developed during FY2013. The annotation will also form the basis for creation of a method to reliably identify recorded objects.« less

Evolving nonapeptide mechanisms of gregariousness and social diversity in birds.

PubMed

Goodson, James L; Kelly, Aubrey M; Kingsbury, Marcy A

2012-03-01

Of the major vertebrate taxa, Class Aves is the most extensively studied in relation to the evolution of social systems and behavior, largely because birds exhibit an incomparable balance of tractability, diversity, and cognitive complexity. In addition, like humans, most bird species are socially monogamous, exhibit biparental care, and conduct most of their social interactions through auditory and visual modalities. These qualities make birds attractive as research subjects, and also make them valuable for comparative studies of neuroendocrine mechanisms. This value has become increasingly apparent as more and more evidence shows that social behavior circuits of the basal forebrain and midbrain are deeply conserved (from an evolutionary perspective), and particularly similar in birds and mammals. Among the strongest similarities are the basic structures and functions of avian and mammalian nonapeptide systems, which include mesotocin (MT) and arginine vasotocin (VT) systems in birds, and the homologous oxytocin (OT) and vasopressin (VP) systems, respectively, in mammals. We here summarize these basic properties, and then describe a research program that has leveraged the social diversity of estrildid finches to gain insights into the nonapeptide mechanisms of grouping, a behavioral dimension that is not experimentally tractable in most other taxa. These studies have used five monogamous, biparental finch species that exhibit group sizes ranging from territorial male-female pairs to large flocks containing hundreds or thousands of birds. The results provide novel insights into the history of nonapeptide functions in amniote vertebrates, and yield remarkable clarity on the nonapeptide biology of dinosaurs and ancient mammals. This article is part of a Special Issue entitled Oxytocin, Vasopressin, and Social Behavior. Copyright © 2012 Elsevier Inc. All rights reserved.

Summary of intrinsic and extrinsic factors affecting detection probability of marsh birds

USGS Publications Warehouse

Conway, C.J.; Gibbs, J.P.

2011-01-01

Many species of marsh birds (rails, bitterns, grebes, etc.) rely exclusively on emergent marsh vegetation for all phases of their life cycle, and many organizations have become concerned about the status and persistence of this group of birds. Yet, marsh birds are notoriously difficult to monitor due to their secretive habits. We synthesized the published and unpublished literature and summarized the factors that influence detection probability of secretive marsh birds in North America. Marsh birds are more likely to respond to conspecific than heterospecific calls, and seasonal peak in vocalization probability varies among co-existing species. The effectiveness of morning versus evening surveys varies among species and locations. Vocalization probability appears to be positively correlated with density in breeding Virginia Rails (Rallus limicola), Soras (Porzana carolina), and Clapper Rails (Rallus longirostris). Movement of birds toward the broadcast source creates biases when using count data from callbroadcast surveys to estimate population density. Ambient temperature, wind speed, cloud cover, and moon phase affected detection probability in some, but not all, studies. Better estimates of detection probability are needed. We provide recommendations that would help improve future marsh bird survey efforts and a list of 14 priority information and research needs that represent gaps in our current knowledge where future resources are best directed. ?? Society of Wetland Scientists 2011.

The bird GPS - long-range navigation in migrants.

PubMed

Thorup, Kasper; Holland, Richard A

2009-11-01

Nowadays few people consider finding their way in unfamiliar areas a problem as a GPS (Global Positioning System) combined with some simple map software can easily tell you how to get from A to B. Although this opportunity has only become available during the last decade, recent experiments show that long-distance migrating animals had already solved this problem. Even after displacement over thousands of kilometres to previously unknown areas, experienced but not first time migrant birds quickly adjust their course toward their destination, proving the existence of an experience-based GPS in these birds. Determining latitude is a relatively simple task, even for humans, whereas longitude poses much larger problems. Birds and other animals however have found a way to achieve this, although we do not yet know how. Possible ways of determining longitude includes using celestial cues in combination with an internal clock, geomagnetic cues such as magnetic intensity or perhaps even olfactory cues. Presently, there is not enough evidence to rule out any of these, and years of studying birds in a laboratory setting have yielded partly contradictory results. We suggest that a concerted effort, where the study of animals in a natural setting goes hand-in-hand with lab-based study, may be necessary to fully understand the mechanism underlying the long-distance navigation system of birds. As such, researchers must remain receptive to alternative interpretations and bear in mind that animal navigation may not necessarily be similar to the human system, and that we know from many years of investigation of long-distance navigation in birds that at least some birds do have a GPS - but we are uncertain how it works.

USDA Forest Service goals and programs for monitoring neotropical migratory birds

Treesearch

Patricia Manley

1993-01-01

The USDA Forest Service (USFS) developed goals, objectives, and guidelines for monitoring neotropical migratory birds (NTMB) on National Forest System lands in response to the Neotropical Migratory Bird Conservation Program Partners in Flight. A USFS task group developed a hierarchical monitoring framework designed to define priorities for type of monitoring data....

50 CFR 15.26 - Approval of cooperative breeding programs.

Code of Federal Regulations, 2010 CFR

2010-10-01

...-sustaining population in captivity of the exotic bird species; (iii) Details on the system of recordkeeping... the exotic bird species in the world; (v) Details on the funding of this program; and (vi) Plans for... program intended to enhance the survival of the population from which the exotic bird species was or would...

Projected avifaunal responses to climate change across the U.S. National Park System

PubMed Central

Wilsey, Chad B.; Taylor, Lotem; Schuurman, Gregor W.

2018-01-01

Birds in U.S. national parks find strong protection from many longstanding and pervasive threats, but remain highly exposed to effects of ongoing climate change. To understand how climate change is likely to alter bird communities in parks, we used species distribution models relating North American Breeding Bird Survey (summer) and Audubon Christmas Bird Count (winter) observations to climate data from the early 2000s and projected to 2041–2070 (hereafter, mid-century) under high and low greenhouse gas concentration trajectories, RCP8.5 and RCP2.6. We analyzed climate suitability projections over time for 513 species across 274 national parks, classifying them as improving, worsening, stable, potential colonization, and potential extirpation. U.S. national parks are projected to become increasingly important for birds in the coming decades as potential colonizations exceed extirpations in 62–100% of parks, with an average ratio of potential colonizations to extirpations of 4.1 in winter and 1.4 in summer under RCP8.5. Average species turnover is 23% in both summer and winter under RCP8.5. Species turnover (Bray-Curtis) and potential colonization and extirpation rates are positively correlated with latitude in the contiguous 48 states. Parks in the Midwest and Northeast are expected to see particularly high rates of change. All patterns are more extreme under RCP8.5 than under RCP2.6. Based on the ratio of potential colonization and extirpation, parks were classified into overall trend groups associated with specific climate-informed conservation strategies. Substantial change to bird and ecological communities is anticipated in coming decades, and current thinking suggests managing towards a forward-looking concept of ecological integrity that accepts change and novel ecological conditions, rather than focusing management goals exclusively on maintaining or restoring a static set of historical conditions. PMID:29561837

Proceedings of the 2004 High Spatial Resolution Commercial Imagery Workshop

NASA Technical Reports Server (NTRS)

2006-01-01

Topics covered include: NASA Applied Sciences Program; USGS Land Remote Sensing: Overview; QuickBird System Status and Product Overview; ORBIMAGE Overview; IKONOS 2004 Calibration and Validation Status; OrbView-3 Spatial Characterization; On-Orbit Modulation Transfer Function (MTF) Measurement of QuickBird; Spatial Resolution Characterization for QuickBird Image Products 2003-2004 Season; Image Quality Evaluation of QuickBird Super Resolution and Revisit of IKONOS: Civil and Commercial Application Project (CCAP); On-Orbit System MTF Measurement; QuickBird Post Launch Geopositional Characterization Update; OrbView-3 Geometric Calibration and Geopositional Accuracy; Geopositional Statistical Methods; QuickBird and OrbView-3 Geopositional Accuracy Assessment; Initial On-Orbit Spatial Resolution Characterization of OrbView-3 Panchromatic Images; Laboratory Measurement of Bidirectional Reflectance of Radiometric Tarps; Stennis Space Center Verification and Validation Capabilities; Joint Agency Commercial Imagery Evaluation (JACIE) Team; Adjacency Effects in High Resolution Imagery; Effect of Pulse Width vs. GSD on MTF Estimation; Camera and Sensor Calibration at the USGS; QuickBird Geometric Verification; Comparison of MODTRAN to Heritage-based Results in Vicarious Calibration at University of Arizona; Using Remotely Sensed Imagery to Determine Impervious Surface in Sioux Falls, South Dakota; Estimating Sub-Pixel Proportions of Sagebrush with a Regression Tree; How Do YOU Use the National Land Cover Dataset?; The National Map Hazards Data Distribution System; Recording a Troubled World; What Does This-Have to Do with This?; When Can a Picture Save a Thousand Homes?; InSAR Studies of Alaska Volcanoes; Earth Observing-1 (EO-1) Data Products; Improving Access to the USGS Aerial Film Collections: High Resolution Scanners; Improving Access to the USGS Aerial Film Collections: Phoenix Digitizing System Product Distribution; System and Product Characterization: Issues Approach; Innovative Approaches to Analysis of Lidar Data for the National Map; Changes in Imperviousness near Military Installations; Geopositional Accuracy Evaluations of QuickBird and OrbView-3: Civil and Commercial Applications Project (CCAP); Geometric Accuracy Assessment: OrbView ORTHO Products; QuickBird Radiometric Calibration Update; OrbView-3 Radiometric Calibration; QuickBird Radiometric Characterization; NASA Radiometric Characterization; Establishing and Verifying the Traceability of Remote-Sensing Measurements to International Standards; QuickBird Applications; Airport Mapping and Perpetual Monitoring Using IKONOS; OrbView-3 Relative Accuracy Results and Impacts on Exploitation and Accuracy Improvement; Using Remotely Sensed Imagery to Determine Impervious Surface in Sioux Falls, South Dakota; Applying High-Resolution Satellite Imagery and Remotely Sensed Data to Local Government Applications: Sioux Falls, South Dakota; Automatic Co-Registration of QuickBird Data for Change Detection Applications; Developing Coastal Surface Roughness Maps Using ASTER and QuickBird Data Sources; Automated, Near-Real Time Cloud and Cloud Shadow Detection in High Resolution VNIR Imagery; Science Applications of High Resolution Imagery at the USGS EROS Data Center; Draft Plan for Characterizing Commercial Data Products in Support of Earth Science Research; Atmospheric Correction Prototype Algorithm for High Spatial Resolution Multispectral Earth Observing Imaging Systems; Determining Regional Arctic Tundra Carbon Exchange: A Bottom-Up Approach; Using IKONOS Imagery to Assess Impervious Surface Area, Riparian Buffers and Stream Health in the Mid-Atlantic Region; Commercial Remote Sensing Space Policy Civil Implementation Update; USGS Commercial Remote Sensing Data Contracts (CRSDC); and Commercial Remote Sensing Space Policy (CRSSP): Civil Near-Term Requirements Collection Update.

76 FR 68263 - Migratory Bird Subsistence Harvest in Alaska; Harvest Regulations for Migratory Birds in Alaska...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-03

... support by quantitative information or studies and those that include citations to, and analyses of, the... included the duck stamp requirement. The representative indicated that there was a conflict in the... to the Federal duck stamp requirement and that he does not support any regulation requiring the...

Publications - GMC 235 | Alaska Division of Geological & Geophysical

Science.gov Websites

reflectance data from cuttings (1,890-11,060') of the Texaco Inc. West Kurupa Unit #1 well Authors: Bird, Ken , and Pawlewicz, Mark Publication Date: 1994 Publisher: Alaska Division of Geological & Geophysical information. Bibliographic Reference Bird, Ken, and Pawlewicz, Mark, 1994, Rock-eval data from cuttings (580

Using regional bird density distribution models to evaluate protected area networks and inform conservation planning

Treesearch

John D. Alexander; Jaime L. Stephens; Sam Veloz; Leo Salas; Josée S. Rousseau; C. John Ralph; Daniel A. Sarr

2017-01-01

As data about populations of indicator species become available, proactive strategies that improve representation of biological diversity within protected area networks should consider finer-scaled evaluations, especially in regions identified as important through course-scale analyses. We use density distribution models derived from a robust regional bird...

75 FR 34758 - Proposed Information Collection; OMB Control Number 1018-0023; Migratory Bird Surveys

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-18

... randomly select migratory bird hunters; send them either a waterfowl questionnaire, a dove and band-tailed pigeon questionnaire, a woodcock questionnaire, or a snipe, rail, gallinule and coot questionnaire; and... regulations. The Sandhill Crane Harvest Survey is an annual questionnaire survey of people who obtained a...

Home Page: Division of Birds: Department of Vertebrate Zoology: National

Science.gov Websites

} Advanced Search Plan Your Visit Exhibitions Education Research & Collections About Us Get Involved © Smithsonian Institution Home Research Collections Visitor Information Loans Destructive Sampling Genetic Resources Database VZ Libraries Related Links Staff VZ All Birds Contact Us NMNH Home › Research &

A neotropical migratory bird prioritization for National Forests and Grasslands

Treesearch

Dick Roth; Richard Peterson

1997-01-01

The Rocky Mountain Region of the USDA Forest Service provides nesting habitat for 146 species of neotropical migratory birds. Interactive, prioritization databases were developed for each National Forest and National Grassland in the Region to assist land managers in making informed decisions about resource allocations. The data was processed using Paradox software....

Isolation of H15N7 influenza virus from wild birds in Eastern Europe and its relationship to viruses from other regions

USDA-ARS?s Scientific Manuscript database

Background: Continuous monitoring of influenza viruses circulating in the natural reservoir in wild birds is important for early warning and forecasting of epizootic and epidemiological situation with influenza. These studies allow getting much valuable information on the environmental features of ...

76 FR 6629 - Information Collection Sent to the Office of Management and Budget (OMB) for Approval; OMB...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-07

... review the ICR online at http://www.reginfo.gov . Follow the instructions to review Department of the... of a currently approved collection. Description of Respondents: States and migratory game bird... of certain migratory game bird populations and limit harvest to levels compatible with each...

The relationship between energy expenditure and speed during pedestrian locomotion in birds: a morphological basis for the elevated y-intercept?

PubMed

Halsey, Lewis G

2013-06-01

The slope of the typically linear relationship between metabolic rate and walking speed represents the net cost of transport (NCOT). The extrapolated y-intercept is often greater than resting metabolic rate, thus representing a fixed cost associated with pedestrian transport including body maintenance costs. The full cause of the elevated y-intercept remains elusive and it could simply represent experimental stresses. The present literature-based study compares the mass-independent energetic cost of pedestrian locomotion in birds (excluding those with an upright posture, i.e. penguins), represented by the y-intercept, to a known predictor of cost of transport, hip height. Both phylogenetically informed and non-phylogenetically informed analyses were undertaken to determine if patterns of association between hip height, body mass, and the y-intercept are robust with respect to the method of analysis. Body mass and hip height were significant predictors of the y-intercept in the best phylogenetically-informed and non-phylogenetically informed models. Thus there is evidence that, in birds at least, the elevated y-intercept is a legitimate component of locomotion energy expenditure. Hip height is probably a good proxy of effective limb length and thus perhaps birds with greater hip heights have lower y-intercepts because their longer legs more efficiently accommodate body motion and/or because their limbs are more aligned with the ground reaction forces. Copyright © 2013 Elsevier Inc. All rights reserved.

Visual but not trigeminal mediation of magnetic compass information in a migratory bird.

PubMed

Zapka, Manuela; Heyers, Dominik; Hein, Christine M; Engels, Svenja; Schneider, Nils-Lasse; Hans, Jörg; Weiler, Simon; Dreyer, David; Kishkinev, Dmitry; Wild, J Martin; Mouritsen, Henrik

2009-10-29

Magnetic compass information has a key role in bird orientation, but the physiological mechanisms enabling birds to sense the Earth's magnetic field remain one of the unresolved mysteries in biology. Two biophysical mechanisms have become established as the most promising magnetodetection candidates. The iron-mineral-based hypothesis suggests that magnetic information is detected by magnetoreceptors in the upper beak and transmitted through the ophthalmic branch of the trigeminal nerve to the brain. The light-dependent hypothesis suggests that magnetic field direction is sensed by radical pair-forming photopigments in the eyes and that this visual signal is processed in cluster N, a specialized, night-time active, light-processing forebrain region. Here we report that European robins with bilateral lesions of cluster N are unable to show oriented magnetic-compass-guided behaviour but are able to perform sun compass and star compass orientation behaviour. In contrast, bilateral section of the ophthalmic branch of the trigeminal nerve in European robins did not influence the birds' ability to use their magnetic compass for orientation. These data show that cluster N is required for magnetic compass orientation in this species and indicate that it may be specifically involved in processing of magnetic compass information. Furthermore, the data strongly suggest that a vision-mediated mechanism underlies the magnetic compass in this migratory songbird, and that the putative iron-mineral-based receptors in the upper beak connected to the brain by the trigeminal nerve are neither necessary nor sufficient for magnetic compass orientation in European robins.

Pigeon Navigation: Different Routes Lead to Frankfurt

PubMed Central

Schiffner, Ingo; Wiltschko, Roswitha

2014-01-01

Background Tracks of pigeons homing to the Frankfurt loft revealed an odd phenomenon: whereas birds returning from the North approach their loft more or less directly in a broad front, pigeons returning from the South choose, from 25 km from home onward, either of two corridors, a direct one and one with a considerable detour to the West. This implies differences in the navigational process. Methodology/Principle Findings Pigeons released at sites at the beginning of the westerly corridor and in this corridor behave just like pigeons returning from farther south, deviating to the west before turning towards their loft. Birds released at sites within the straight corridors, in contrast, take more or less straight routes. The analysis of the short-term correlation dimension, a quantity reflecting the complexity of the system and with it, the number of factors involved in the navigational process, reveals that it is significantly larger in pigeons choosing the westerly corridor than in the birds flying straight - 3.03 vs. 2.85. The difference is small, however, suggesting a different interpretation of the same factors, with some birds apparently preferring particular factors over others. Conclusions The specific regional distribution of the factors which pigeons use to determine their home course seems to provide ambiguous information in the area 25 km south of the loft, resulting in the two corridors. Pigeons appear to navigate by deriving their routes directly from the locally available navigational factors which they interpret in an individual way. The fractal nature of the correlation dimensions indicates that the navigation process of pigeons is chaotic-deterministic; published tracks of migratory birds suggest that this may apply to avian navigation in general. PMID:25391144

Dietary antioxidants, lipid peroxidation and plumage colouration in nestling blue tits Cyanistes caeruleus

NASA Astrophysics Data System (ADS)

Larcombe, Stephen D.; Mullen, William; Alexander, Lucille; Arnold, Kathryn E.

2010-10-01

Carotenoid pigments are responsible for many of the red, yellow and orange plumage and integument traits seen in birds. One idea suggests that since carotenoids can act as antioxidants, carotenoid-mediated colouration may reveal an individual's ability to resist oxidative damage. In fact, there is currently very little information on the effects of most dietary-acquired antioxidants on oxidative stress in wild birds. Here, we assessed the impacts on oxidative damage, plasma antioxidants, growth and plumage colouration after supplementing nestling blue tits Cyanistes caeruleus with one of three diets; control, carotenoid treatment or α-tocopherol treatment. Oxidative damage was assessed by HPLC analysis of plasma levels of malondialdehyde (MDA), a by-product of lipid peroxidation. Contrary to predictions, we found no differences in oxidative damage, plumage colouration or growth rate between treatment groups. Although plasma lutein concentrations were significantly raised in carotenoid-fed chicks, α-tocopherol treatment had no effect on concentrations of plasma α-tocopherol compared with controls. Interestingly, we found that faster growing chicks had higher levels of oxidative damage than slower growing birds, independent of treatment, body mass and condition at fledging. Moreover, the chromatic signal of the chest plumage of birds was positively correlated with levels of MDA but not plasma antioxidant concentrations: more colourful nestlings had higher oxidative damage than less colourful individuals. Thus, increased carotenoid-mediated plumage does not reveal resistance to oxidative damage for nestling blue tits, but may indicate costs paid, in terms of oxidative damage. Our results indicate that the trade-offs between competing physiological systems for dietary antioxidants are likely to be complex in rapidly developing birds. Moreover, interpreting the biological relevance of different biomarkers of antioxidant status represents a challenge for evolutionary ecology.

Variability in vegetation effects on density and nesting success of grassland birds

USGS Publications Warehouse

Winter, Maiken; Johnson, Douglas H.; Shaffer, Jill A.

2005-01-01

The structure of vegetation in grassland systems, unlike that in forest systems, varies dramatically among years on the same sites, and among regions with similar vegetation. The role of this variation in vegetation structure on bird density and nesting success of grassland birds is poorly understood, primarily because few studies have included sufficiently large temporal and spatial scales to capture the variation in vegetation structure, bird density, or nesting success. To date, no large-scale study on grassland birds has been conducted to investigate whether grassland bird density and nesting success respond similarly to changes in vegetation structure. However, reliable management recommendations require investigations into the distribution and nesting success of grassland birds over larger temporal and spatial scales. In addition, studies need to examine whether bird density and nesting success respond similarly to changing environmental conditions. We investigated the effect of vegetation structure on the density and nesting success of 3 grassland-nesting birds: clay-colored sparrow (Spizella pallida), Savannah sparrow (Passerculus sandwichensis), and bobolink (Dolichonyx oryzivorus) in 3 regions of the northern tallgrass prairie in 1998-2001. Few vegetation features influenced the densities of our study species, and each species responded differently to those vegetation variables. We could identify only 1 variable that clearly influenced nesting success of 1 species: clay-colored sparrow nesting success increased with increasing percentage of nest cover from the surrounding vegetation. Because responses of avian density and nesting success to vegetation measures varied among regions, years, and species, land managers at all times need to provide grasslands with different types of vegetation structure. Management guidelines developed from small-scale, short-term studies may lead to misrepresentations of the needs of grassland-nesting birds.

Physiological underpinnings associated with differences in pace of life and metabolic rate in north temperate and neotropical birds.

PubMed

Jimenez, Ana Gabriela; Cooper-Mullin, Clara; Calhoon, Elisabeth A; Williams, Joseph B

2014-07-01

Animal life-history traits fall within limited ecological space with animals that have high reproductive rates having short lives, a continuum referred to as a "slow-fast" life-history axis. Animals of the same body mass at the slow end of the life-history continuum are characterized by low annual reproductive output and low mortality rate, such as is found in many tropical birds, whereas at the fast end, rates of reproduction and mortality are high, as in temperate birds. These differences in life-history traits are thought to result from trade-offs between investment in reproduction or self-maintenance as mediated by the biotic and abiotic environment. Thus, tropical and temperate birds provide a unique system to examine physiological consequences of life-history trade-offs at opposing ends of the "pace of life" spectrum. We have explored the implications of these trade-offs at several levels of physiological organization including whole-animal, organ systems, and cells. Tropical birds tend to have higher survival, slower growth, lower rates of whole-animal basal metabolic rate and peak metabolic rate, and smaller metabolically active organs compared with temperate birds. At the cellular level, primary dermal fibroblasts from tropical birds tend to have lower cellular metabolic rates and appear to be more resistant to oxidative cell stress than those of temperate birds. However, at the subcellular level, lipid peroxidation rates, a measure of the ability of lipid molecules within the cell membranes to thwart the propagation of oxidative damage, appear not to be different between tropical and temperate species. Nevertheless, lipids in mitochondrial membranes of tropical birds tend to have increased concentrations of plasmalogens (phospholipids with antioxidant properties), and decreased concentrations of cardiolipin (a complex phospholipid in the electron transport chain) compared with temperate birds.

Rough set soft computing cancer classification and network: one stone, two birds.

PubMed

Zhang, Yue

2010-07-15

Gene expression profiling provides tremendous information to help unravel the complexity of cancer. The selection of the most informative genes from huge noise for cancer classification has taken centre stage, along with predicting the function of such identified genes and the construction of direct gene regulatory networks at different system levels with a tuneable parameter. A new study by Wang and Gotoh described a novel Variable Precision Rough Sets-rooted robust soft computing method to successfully address these problems and has yielded some new insights. The significance of this progress and its perspectives will be discussed in this article.

Utilizing the Cyberforest live sound system with social media to remotely conduct woodland bird censuses in Central Japan.

PubMed

Saito, Kaoru; Nakamura, Kazuhiko; Ueta, Mutsuyuki; Kurosawa, Reiko; Fujiwara, Akio; Kobayashi, Hill Hiroki; Nakayama, Masaya; Toko, Ayako; Nagahama, Kazuyo

2015-11-01

We have developed a system that streams and archives live sound from remote areas across Japan via an unmanned automatic camera. The system was used to carry out pilot bird censuses in woodland; this allowed us to examine the use of live sound transmission and the role of social media as a mediator in remote scientific monitoring. The system has been streaming sounds 8 h per day for more than five years. We demonstrated that: (1) the transmission of live sound from a remote woodland could be used effectively to monitor birds in a remote location; (2) the simultaneous involvement of several participants via Internet Relay Chat to listen to live sound transmissions could enhance the accuracy of census data collection; and (3) interactions through Twitter allowed members of the public to engage or help with the remote monitoring of birds and experience inaccessible nature through the use of novel technologies.

Bird diversity and distribution in relation to urban landscape types in northern Rwanda.

PubMed

Gatesire, T; Nsabimana, D; Nyiramana, A; Seburanga, J L; Mirville, M O

2014-01-01

Using the point count method, linear mixed models, Shannon's diversity index, and Bray-Curtis cluster analysis, we conducted a study of the effect of urban fabric layout on bird diversity and distribution in northern Rwanda. The results showed a significant effect of city landscapes on bird richness and relative abundance; residential neighborhoods, institutional grounds, and informal settlements had the highest species diversity in comparison to other microlandscape types. Riversides were characterized by specialized bird species, commonly known to be restricted to wetland environments. Built-up areas and open field landscapes had comparable results. One Albertine Rift endemic bird species, the Ruwenzori Double-collared Sunbird (Cinnyris stuhlmanni), was recorded. Three migratory birds were found in Musanze city for the first time: the Common Sandpiper (Actitis hypoleucos), the Spotted Flycatcher (Muscicapa striata), and the Willow Warbler (Phylloscopus trochilus). Two bird species have not been previously reported in Rwanda: the Garden Warbler (Sylvia borin) and the Lesser Spotted Eagle (Aquila pomarina). The implications of this study are particularly relevant to urban decision makers who should consider the existence of a great diversity of avian fauna when developing and implementing master plans, especially when villages and cities are in proximity of protected areas or natural reserves.

A method of studying wild bird populations by mist-netting and banding

USGS Publications Warehouse

Stamm, D.D.; Davis, D.E.; Robbins, C.S.

1960-01-01

1. Progress is reported toward development of a method of bird-population study based on mist-netting and banding. A definite pattern of arrangement and schedule of operation are presented. 2. Nets were operated for a total of 4200 net-hours during which 966 captures were made (23.0 birds per 100 net-hours). A total of 431 adult breeding birds were banded and 38 per cent of them were recaptured. 3. A breeding bird census was made simultaneously in the same area by the Williams spot-mapping technique. 4. Estimates of population by recapture agreed closely with the spot-mappmg census. 5. Some birds are demonstrated to have overlapping home-ranges much larger than their singing territories. 6. Recruitment and net-shyness distort recapture estimates of population .but the method allows detection and assessment of their influence in the population dealt with here. 7. The method produced integrated information on population density and dynamics, movement and behavior. 8. The procedure is especially well adapted to studies of disease agents in bird populations. 9. A simple scheme for description of the habitat in terms of relative abundance and frequency of occurrence of tree species was used.

An integrated approach for updating cadastral maps in Pakistan using satellite remote sensing data

NASA Astrophysics Data System (ADS)

Ali, Zahir; Tuladhar, Arbind; Zevenbergen, Jaap

2012-08-01

Updating cadastral information is crucial for recording land ownership and property division changes in a timely fashioned manner. In most cases, the existing cadastral maps do not provide up-to-date information on land parcel boundaries. Such a situation demands that all the cadastral data and parcel boundaries information in these maps to be updated in a timely fashion. The existing techniques for acquiring cadastral information are discipline-oriented based on different disciplines such as geodesy, surveying, and photogrammetry. All these techniques require a large number of manpower, time, and cost when they are carried out separately. There is a need to integrate these techniques for acquiring cadastral information to update the existing cadastral data and (re)produce cadastral maps in an efficient manner. To reduce the time and cost involved in cadastral data acquisition, this study develops an integrated approach by integrating global position system (GPS) data, remote sensing (RS) imagery, and existing cadastral maps. For this purpose, the panchromatic image with 0.6 m spatial resolution and the corresponding multi-spectral image with 2.4 m spatial resolution and 3 spectral bands from QuickBird satellite were used. A digital elevation model (DEM) was extracted from SPOT-5 stereopairs and some ground control points (GCPs) were also used for ortho-rectifying the QuickBird images. After ortho-rectifying these images and registering the multi-spectral image to the panchromatic image, fusion between them was attained to get good quality multi-spectral images of these two study areas with 0.6 m spatial resolution. Cadastral parcel boundaries were then identified on QuickBird images of the two study areas via visual interpretation using participatory-GIS (PGIS) technique. The regions of study are the urban and rural areas of Peshawar and Swabi districts in the Khyber Pakhtunkhwa province of Pakistan. The results are the creation of updated cadastral maps with a lot of cadastral information which can be used in updating the existing cadastral data with less time and cost.

The visual system of diurnal raptors: updated review.

PubMed

González-Martín-Moro, J; Hernández-Verdejo, J L; Clement-Corral, A

2017-05-01

Diurnal birds of prey (raptors) are considered the group of animals with highest visual acuity (VA). The purpose of this work is to review all the information recently published about the visual system of this group of animals. A bibliographic search was performed in PubMed. The algorithm used was (raptor OR falcon OR kestrel OR hawk OR eagle) AND (vision OR «visual acuity» OR eye OR macula OR retina OR fovea OR «nictitating membrane» OR «chromatic vision» OR ultraviolet). The search was restricted to the «Title» and «Abstract» fields, and to non-human species, without time restriction. The proposed algorithm located 97 articles. Birds of prey are endowed with the highest VA of the animal kingdom. However most of the works study one individual or a small group of individuals, and the methodology is heterogeneous. The most studied bird is the Peregrine falcon (Falco peregrinus), with an estimated VA of 140 cycles/degree. Some eagles are endowed with similar VA. The tubular shape of the eye, the large pupil, and a high density of photoreceptors make this extraordinary VA possible. In some species, histology and optic coherence tomography demonstrate the presence of 2foveas. The nasal fovea (deep fovea) has higher VA. Nevertheless, the exact function of each fovea is unknown. The vitreous contained in the deep fovea could behave as a third lens, adding some magnification to the optic system. Copyright © 2017 Sociedad Española de Oftalmología. Publicado por Elsevier España, S.L.U. All rights reserved.

Experimental Divergences in the Visual Cognition of Birds and Mammals

PubMed Central

Qadri, Muhammad A. J.; Cook, Robert G.

2015-01-01

The comparative analysis of visual cognition across classes of animals yields important information regarding underlying cognitive and neural mechanisms involved with this foundational aspect of behavior. Birds, and pigeons specifically, have been an important source and model for this comparison, especially in relation to mammals. During these investigations, an extensive number of experiments have found divergent results in how pigeons and humans process visual information. Four areas of these divergences are collected, reviewed, and analyzed. We examine the potential contribution and limitations of experimental, spatial, and attentional factors in the interpretation of these findings and their implications for mechanisms of visual cognition in birds and mammals. Recommendations are made to help advance these comparisons in service of understanding the general principles by which different classes and species generate representations of the visual world. PMID:26207154

Cryptococcosis outbreak in psittacine birds in Brazil.

PubMed

Raso, T F; Werther, K; Miranda, E T; Mendes-Giannini, M J S

2004-08-01

An outbreak of cryptococcosis occurred in a breeding aviary in São Paulo, Brazil. Seven psittacine birds (of species Charmosyna papou, Lorius lory, Trichoglossus goldiei, Psittacula krameri and Psittacus erithacus) died of disseminated cryptococcosis. Incoordination, progressive paralysis and difficulty in flying were seen in five birds, whereas superficial lesions coincident with respiratory alterations were seen in two birds. Encapsulated yeasts suggestive of Cryptococcus sp. were seen in faecal smears stained with India ink in two cases. Histological examination of the birds showed cryptococcal cells in various tissues, including the beak, choana, sinus, lungs, air sacs, heart, liver, spleen, kidneys, intestines and central nervous system. High titres of cryptococcal antigen were observed in the serum of an affected bird. In this case, titres increased during treatment and the bird eventually died. Yeasts were isolated from the nasal mass, faeces and liver of one bird. Cryptococcus neoformans var. gattii serovar B was identified based on biochemical, physiological and serological tests. These strains were resistant (minimum inhibitory concentration 64 microg/ml) to fluconazole. This is the first report of C. neoformans var. gattii occurring in psittacine birds in Brazil.

76 FR 59298 - Migratory Bird Hunting; Migratory Bird Hunting Regulations on Certain Federal Indian Reservations...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-09-26

... authority, and has a court system with judges that hear cases and set fines. Nontoxic shot is required... possession limits. In all cases, the regulations established under the guidelines must be consistent with the... regulations for migratory bird hunting by American Indian tribal members. We received one comment on our...

Ball-Stick-Bird: Teaching with the Story Engram.

ERIC Educational Resources Information Center

Fuller, Renee

1990-01-01

This paper describes the Ball-Stick-Bird reading system, which shows students how all the letters of the alphabet can be built with three basic forms: a circle (ball), a line (stick), and an angle (bird). The method also uses modified phonics and developmental linguistics, aids story reading by using capital letters in the beginning, and enhances…

Brain systems underlying encounter expectancy bias in spider phobia.

PubMed

Aue, Tatjana; Hoeppli, Marie-Eve; Piguet, Camille; Hofstetter, Christoph; Rieger, Sebastian W; Vuilleumier, Patrik

2015-06-01

Spider-phobic individuals are characterized by exaggerated expectancies to be faced with spiders (so-called encounter expectancy bias). Whereas phobic responses have been linked to brain systems mediating fear, little is known about how the recruitment of these systems relates to exaggerated expectancies of threat. We used fMRI to examine spider-phobic and control participants while they imagined visiting different locations in a forest after having received background information about the likelihood of encountering different animals (spiders, snakes, and birds) at these locations. Critically, imagined encounter expectancies modulated brain responses differently in phobics as compared with controls. Phobics displayed stronger negative modulation of activity in the lateral prefrontal cortex, precuneus, and visual cortex by encounter expectancies for spiders, relative to snakes or birds (within-participants analysis); these effects were not seen in controls. Between-participants correlation analyses within the phobic group further corroborated the hypothesis that these phobia-specific modulations may underlie irrationality in encounter expectancies (deviations of encounter expectancies from objective background information) in spider phobia; the greater the negative modulation a phobic participant displayed in the lateral prefrontal cortex, precuneus, and visual cortex, the stronger was her bias in encounter expectancies for spiders. Interestingly, irrationality in expectancies reflected in frontal areas relied on right rather than left hemispheric deactivations. Our data accord with the idea that expectancy biases in spider phobia may reflect deficiencies in cognitive control and contextual integration that are mediated by right frontal and parietal areas.

Development of an intelligent hydroinformatic system for real-time monitoring and assessment of civil infrastructure

NASA Astrophysics Data System (ADS)

Cahill, Paul; Michalis, Panagiotis; Solman, Hrvoje; Kerin, Igor; Bekic, Damir; Pakrashi, Vikram; McKeogh, Eamon

2017-04-01

With the effects of climate change becoming more apparent, extreme weather events are now occurring with greater frequency throughout the world. Such extreme events have resulted in increased high intensity flood events which are having devastating consequences on hydro-structures, especially on bridge infrastructure. The remote and often inaccessible nature of such bridges makes inspections problematic, a major concern if safety assessments are required during and after extreme flood events. A solution to this is the introduction of smart, low cost sensing solutions at locations susceptible to hydro-hazards. Such solutions can provide real-time information on the health of the bridge and its environments, with such information aiding in the mitigation of the risks associated with extreme weather events. This study presents the development of an intelligent system for remote, real-time monitoring of hydro-hazards to bridge infrastructure. The solution consists of two types of remote monitoring stations which have the capacity to monitor environmental conditions and provide real-time information to a centralized, big data database solution, from which an intelligent decision support system will accommodate the results to control and manage bridge, river and catchment assets. The first device developed as part of the system is the Weather Information Logging Device (WILD), which monitors rainfall, temperature and air and soil moisture content. The ability of the WILD to monitor rainfall in real time enables flood early warning alerts and predictive river flow conditions, thereby enabling decision makers the ability to make timely and effective decisions about critical infrastructures in advance of extreme flood events. The WILD is complemented by a second monitoring device, the Bridge Information Recording Device (BIRD), which monitors water levels at a given location in real-time. The monitoring of water levels of a river allows for, among other applications, hydraulic modelling to assess the likely impact that severe flood events will have on a bridges foundation, particularly due to scour. The process of reading and validating data from the WILD and BIRD buffer servers is outlined, as is the transmission protocol used for the sending of recorded data to a centralized repository for further use and analysis. Finally, the development of a centralized repository for the collection of data from the WILD and BIRD devices is presented. Eventually the big data solution would be used to receive, store and send the monitored data to the hydrological models, whether existing or developed, and the results would be transmitted to the intelligent decision support system based on a web-based platform, for managing, planning and executing data, processes and procedures for bridge assets. The development of intelligent hydroinformatic system is an important tool for the protection of key infrastructure assets from the increasingly common effects of climate change. Acknowledgement The authors wish to acknowledge the financial support of the European Commission, through the Marie Curie Industry-Academia Partnership and Pathways Network BRIDGE SMS (Intelligent Bridge Assessment Maintenance and Management System) - FP7-People-2013-IAPP- 612517.

Pathological and molecular characterization of systemic isosporosis (atoxoplasmosis) in captive green-winged saltator (Saltator similis).

PubMed

Oliveira, Ayisa Rodrigues de; Souza, Tayse Domingues de; Mol, Juliana P S; Flecher, Mayra Cunha; Hiura, Emy; Santos, Renato Lima

2018-05-15

Systemic isosporosis, also called atoxoplasmosis or visceral coccidiosis, is a disease that affects birds in general. Pathogenesis of systemic isosporosis and its etiologic agent have not been well characterized, but taxonomically Atoxoplasma is currently considered a junior objective synonym of Isospora. The present report aimed to describe pathological and molecular findings of systemic isosporosis in captive green-winged saltators (Saltator similis) from the State of Espírito Santo, Brazil. In a commercial breeding facility eleven birds with two to nine months of age died from 2015 to 2016. These birds developed nonspecific clinical signs, including bristly feathers, hyporexia, loss of weight, and apathy. Two birds were necropsied, and grossly there were hepatomegaly, splenomegaly, necrosis of lymphoid follicles, hepatic necrosis, and severe enteritis. Merozoites were observed in the heart, small intestine, proventriculus, brain, liver, spleen, and kidneys. 23 S RNA PCR amplicons from DNA extracted from the liver and the intestinal contents had 99% identity with Atoxoplasma sp., whereas amplicons of mitochondrial cytochrome c oxidase subunit 1 ha d 97% identity with Isospora greineri. In conclusion, this report indicates that systemic isosporosis in green-winged saltator is a disease that affects the spleen, liver, and small intestine, with high mortality for young birds, resulting in significant loses to commercial breeding facilities. Copyright © 2018 Elsevier B.V. All rights reserved.

West Nile virus infection in cats: ABCD guidelines on prevention and management.

PubMed

Egberink, Herman; Addie, Diane D; Boucraut-Baralon, Corine; Frymus, Tadeusz; Gruffydd-Jones, Tim; Hartmann, Katrin; Horzinek, Marian C; Hosie, Margaret J; Marsilio, Fulvio; Lloret, Albert; Lutz, Hans; Pennisi, Maria Grazia; Radford, Alan D; Thiry, Etienne; Truyen, Uwe; Möstl, Karin

2015-07-01

West Nile virus (WNV) is a zoonotic mosquito-borne virus with a broad host range that infects mainly birds and mosquitos, but also mammals (including humans), reptiles, amphibians and ticks. It is maintained in a bird-mosquito-bird transmission cycle. The most important vectors are bird-feeding mosquitos of the Culex genus; maintenance and amplification mainly involve passerine birds. WNV can cause disease in humans, horses and several species of birds following infection of the central nervous system. Cats can also be infected through mosquito bites, and by eating infected small mammals and probably also birds. Although seroprevalence in cats can be high in endemic areas, clinical disease and mortality are rarely reported. If a cat is suspected of clinical signs due to an acute WNV infection, symptomatic treatment is indicated. © Published by SAGE on behalf of ISFM and AAFP 2015.

Characterizing wild bird contact and seropositivity to highly pathogenic avian influenza A (H5N1) virus in Alaskan residents.

PubMed

Reed, Carrie; Bruden, Dana; Byrd, Kathy K; Veguilla, Vic; Bruce, Michael; Hurlburt, Debby; Wang, David; Holiday, Crystal; Hancock, Kathy; Ortiz, Justin R; Klejka, Joe; Katz, Jacqueline M; Uyeki, Timothy M

2014-09-01

Highly pathogenic avian influenza A (HPAI) H5N1 viruses have infected poultry and wild birds on three continents with more than 600 reported human cases (59% mortality) since 2003. Wild aquatic birds are the natural reservoir for avian influenza A viruses, and migratory birds have been documented with HPAI H5N1 virus infection. Since 2005, clade 2.2 HPAI H5N1 viruses have spread from Asia to many countries. We conducted a cross-sectional seroepidemiological survey in Anchorage and western Alaska to identify possible behaviors associated with migratory bird exposure and measure seropositivity to HPAI H5N1. We enrolled rural subsistence bird hunters and their families, urban sport hunters, wildlife biologists, and a comparison group without bird contact. We interviewed participants regarding their exposures to wild birds and collected blood to perform serologic testing for antibodies against a clade 2.2 HPAI H5N1 virus strain. Hunters and wildlife biologists reported exposures to wild migratory birds that may confer risk of infection with avian influenza A viruses, although none of the 916 participants had evidence of seropositivity to HPAI H5N1. We characterized wild bird contact among Alaskans and behaviors that may influence risk of infection with avian influenza A viruses. Such knowledge can inform surveillance and risk communication surrounding HPAI H5N1 and other influenza viruses in a population with exposure to wild birds at a crossroads of intercontinental migratory flyways. © 2014 The Authors. Influenza and Other Respiratory Viruses Published by John Wiley & Sons Ltd.

How Displaced Migratory Birds Could Use Volatile Atmospheric Compounds to Find Their Migratory Corridor: A Test Using a Particle Dispersion Model

PubMed Central

Safi, Kamran; Gagliardo, Anna; Wikelski, Martin; Kranstauber, Bart

2016-01-01

Olfaction represents an important sensory modality for navigation of both homing pigeons and wild birds. Experimental evidence in homing pigeons showed that airborne volatile compounds carried by the winds at the home area are learned in association with wind directions. When displaced, pigeons obtain information on the direction of their displacement using local odors at the release site. Recently, the role of olfactory cues in navigation has been reported also for wild birds during migration. However, the question whether wild birds develop an olfactory navigational map similar to that described in homing pigeons or, alternatively, exploit the distribution of volatile compounds in different manner for reaching the goal is still an open question. Using an interdisciplinary approach, we evaluate the possibilities of reconstructing spatio-temporally explicit aerosol dispersion at large spatial scales using the particle dispersion model FLEXPART. By combining atmospheric information with particle dispersion models, atmospheric scientists predict the dispersion of pollutants for example, after nuclear fallouts or volcanic eruptions or wildfires, or in retrospect reconstruct the origin of emissions such as aerosols. Using simple assumptions, we reconstructed the putative origin of aerosols traveling to the location of migrating birds. We use the model to test whether the putative odor plume could have originated from an important stopover site. If the migrating birds knew this site and the associated plume from previous journeys, the odor could contribute to the reorientation towards the migratory corridor, as suggested for the model scenario in displaced Lesser black-backed gulls migrating from Northern Europe into Africa. PMID:27799899

Evaluating gull diets: A comparison of conventional methods and stable isotope analysis

USGS Publications Warehouse

Weiser, Emily L.; Powell, Abby N.

2011-01-01

Samples such as regurgitated pellets and food remains have traditionally been used in studies of bird diets, but these can produce biased estimates depending on the digestibility of different foods. Stable isotope analysis has been developed as a method for assessing bird diets that is not biased by digestibility. These two methods may provide complementary or conflicting information on diets of birds, but are rarely compared directly. We analyzed carbon and nitrogen stable isotope ratios of feathers of Glaucous Gull (Larus hyperboreus) chicks from eight breeding colonies in northern Alaska, and used a Bayesian mixing model to generate a probability distribution for the contribution of each food group to diets. We compared these model results with probability distributions from conventional diet samples (pellets and food remains) from the same colonies and time periods. Relative to the stable isotope estimates, conventional analysis often overestimated the contributions of birds and small mammals to gull diets and often underestimated the contributions of fish and zooplankton. Both methods gave similar estimates for the contributions of scavenged caribou, miscellaneous marine foods, and garbage to diets. Pellets and food remains therefore may be useful for assessing the importance of garbage relative to certain other foods in diets of gulls and similar birds, but are clearly inappropriate for estimating the potential impact of gulls on birds, small mammals, or fish. However, conventional samples provide more species-level information than stable isotope analysis, so a combined approach would be most useful for diet analysis and assessing a predator's impact on particular prey groups.

Rapid diagnosis of avian influenza virus in wild birds: Use of a portable rRT-PCR and freeze-dried reagents in the field

USGS Publications Warehouse

Takekawa, John Y.; Hill, N.J.; Schultz, A.K.; Iverson, S.A.; Cardona, C.J.; Boyce, W.M.; Dudley, J.P.

2011-01-01

Wild birds have been implicated in the spread of highly pathogenic avian influenza (HPAI) of the H5N1 subtype, prompting surveillance along migratory flyways. Sampling of wild birds for avian influenza virus (AIV) is often conducted in remote regions, but results are often delayed because of the need to transport samples to a laboratory equipped for molecular testing. Real-time reverse transcriptase polymerase chain reaction (rRT-PCR) is a molecular technique that offers one of the most accurate and sensitive methods for diagnosis of AIV. The previously strict lab protocols needed for rRT-PCR are now being adapted for the field. Development of freeze-dried (lyophilized) reagents that do not require cold chain, with sensitivity at the level of wet reagents has brought on-site remote testing to a practical goal. Here we present a method for the rapid diagnosis of AIV in wild birds using an rRT-PCR unit (Ruggedized Advanced Pathogen Identification Device or RAPID, Idaho Technologies, Salt Lake City, UT) that employs lyophilized reagents (Influenza A Target 1 Taqman; ASAY-ASY-0109, Idaho Technologies). The reagents contain all of the necessary components for testing at appropriate concentrations in a single tube: primers, probes, enzymes, buffers and internal positive controls, eliminating errors associated with improper storage or handling of wet reagents. The portable unit performs a screen for Influenza A by targeting the matrix gene and yields results in 2-3 hours. Genetic subtyping is also possible with H5 and H7 primer sets that target the hemagglutinin gene. The system is suitable for use on cloacal and oropharyngeal samples collected from wild birds, as demonstrated here on the migratory shorebird species, the western sandpiper (Calidrus mauri) captured in Northern California. Animal handling followed protocols approved by the Animal Care and Use Committee of the U.S. Geological Survey Western Ecological Research Center and permits of the U.S. Geological Survey Bird Banding Laboratory. The primary advantage of this technique is to expedite diagnosis of wild birds, increasing the chances of containing an outbreak in a remote location. On-site diagnosis would also prove useful for identifying and studying infected individuals in wild populations. The opportunity to collect information on host biology (immunological and physiological response to infection) and spatial ecology (migratory performance of infected birds) will provide insights into the extent to which wild birds can act as vectors for AIV over long distances.

Rapid Diagnosis of Avian Influenza Virus in Wild Birds: Use of a Portable rRT-PCR and Freeze-dried Reagents in the Field

PubMed Central

Takekawa, John Y.; Hill, Nichola J.; Schultz, Annie K.; Iverson, Samuel A.; Cardona, Carol J.; Boyce, Walter M.; Dudley, Joseph P.

2011-01-01

Wild birds have been implicated in the spread of highly pathogenic avian influenza (HPAI) of the H5N1 subtype, prompting surveillance along migratory flyways. Sampling of wild birds for avian influenza virus (AIV) is often conducted in remote regions, but results are often delayed because of the need to transport samples to a laboratory equipped for molecular testing. Real-time reverse transcriptase polymerase chain reaction (rRT-PCR) is a molecular technique that offers one of the most accurate and sensitive methods for diagnosis of AIV. The previously strict lab protocols needed for rRT-PCR are now being adapted for the field. Development of freeze-dried (lyophilized) reagents that do not require cold chain, with sensitivity at the level of wet reagents has brought on-site remote testing to a practical goal. Here we present a method for the rapid diagnosis of AIV in wild birds using an rRT-PCR unit (Ruggedized Advanced Pathogen Identification Device or RAPID, Idaho Technologies, Salt Lake City, UT) that employs lyophilized reagents (Influenza A Target 1 Taqman; ASAY-ASY-0109, Idaho Technologies). The reagents contain all of the necessary components for testing at appropriate concentrations in a single tube: primers, probes, enzymes, buffers and internal positive controls, eliminating errors associated with improper storage or handling of wet reagents. The portable unit performs a screen for Influenza A by targeting the matrix gene and yields results in 2-3 hours. Genetic subtyping is also possible with H5 and H7 primer sets that target the hemagglutinin gene. The system is suitable for use on cloacal and oropharyngeal samples collected from wild birds, as demonstrated here on the migratory shorebird species, the western sandpiper (Calidrus mauri) captured in Northern California. Animal handling followed protocols approved by the Animal Care and Use Committee of the U.S. Geological Survey Western Ecological Research Center and permits of the U.S. Geological Survey Bird Banding Laboratory. The primary advantage of this technique is to expedite diagnosis of wild birds, increasing the chances of containing an outbreak in a remote location. On-site diagnosis would also prove useful for identifying and studying infected individuals in wild populations. The opportunity to collect information on host biology (immunological and physiological response to infection) and spatial ecology (migratory performance of infected birds) will provide insights into the extent to which wild birds can act as vectors for AIV over long distances. PMID:21847073

Aquatic bird disease and mortality as an indicator of changing ecosystem health

USGS Publications Warehouse

Newman, Scott H.; Chmura, Aleksei; Converse, Kathy; Kilpatrick, A. Marm; Patel, Nikkita; Lammers, Emily; Daszak, Peter

2007-01-01

We analyzed data from pathologic investigations in the United States, collected by the USGS National Wildlife Health Center between 1971 and 2005, into aquatic bird mortality events. A total of 3619 mortality events was documented for aquatic birds, involving at least 633 708 dead birds from 158 species belonging to 23 families. Environmental causes accounted for the largest proportion of mortality events (1737 or 48%) and dead birds (437 258 or 69%); these numbers increased between 1971 and 2000, with biotoxin mortalities due to botulinum intoxication (Types C and E) being the leading cause of death. Infectious diseases were the second leading cause of mortality events (20%) and dead birds (20%), with both viral diseases, including duck plague (Herpes virus), paramyxovirus of cormorants (Paramyxovirus PMV1) and West Nile virus (Flavivirus), and bacterial diseases, including avian cholera (Pasteurella multocida), chlamydiosis (Chalmydia psittici), and salmonellosis (Salmonella sp.), contributing. Pelagic, coastal marine birds and species that use marine and freshwater habitats were impacted most frequently by environmental causes of death, with biotoxin exposure, primarily botulinum toxin, resulting in mortalities of both coastal and freshwater species. Pelagic birds were impacted most severely by emaciation and starvation, which may reflect increased anthropogenic pressure on the marine habitat from over-fishing, pollution, and other factors. Our study provides important information on broad trends in aquatic bird mortality and highlights how long-term wildlife disease studies can be used to identify anthropogenic threats to wildlife conservation and ecosystem health. In particular, mortality data for the past 30 yr suggest that biotoxins, viral, and bacterial diseases could have impacted >5 million aquatic birds.

‘Natural experiment’ Demonstrates Top-Down Control of Spiders by Birds on a Landscape Level

PubMed Central

Rogers, Haldre; Hille Ris Lambers, Janneke; Miller, Ross; Tewksbury, Joshua J.

2012-01-01

The combination of small-scale manipulative experiments and large-scale natural experiments provides a powerful approach for demonstrating the importance of top-down trophic control on the ecosystem scale. The most compelling natural experiments have come from studies examining the landscape-scale loss of apex predators like sea otters, wolves, fish and land crabs. Birds are dominant apex predators in terrestrial systems around the world, yet all studies on their role as predators have come from small-scale experiments; the top-down impact of bird loss on their arthropod prey has yet to be examined at a landscape scale. Here, we use a unique natural experiment, the extirpation of insectivorous birds from nearly all forests on the island of Guam by the invasive brown tree snake, to produce the first assessment of the impacts of bird loss on their prey. We focused on spiders because experimental studies showed a consistent top-down effect of birds on spiders. We conducted spider web surveys in native forest on Guam and three nearby islands with healthy bird populations. Spider web densities on the island of Guam were 40 times greater than densities on islands with birds during the wet season, and 2.3 times greater during the dry season. These results confirm the general trend from manipulative experiments conducted in other systems however, the effect size was much greater in this natural experiment than in most manipulative experiments. In addition, bird loss appears to have removed the seasonality of spider webs and led to larger webs in at least one spider species in the forests of Guam than on nearby islands with birds. We discuss several possible mechanisms for the observed changes. Overall, our results suggest that effect sizes from smaller-scale experimental studies may significantly underestimate the impact of bird loss on spider density as demonstrated by this large-scale natural experiment. PMID:22970126

The application of GIS and RS for epidemics: a case study of the spread of highly pathogenic avian influenza in China in 2004-2005

NASA Astrophysics Data System (ADS)

Zhong, Shaobo; Lan, Guiwen; Zhu, Haiguo; Wen, Renqiang; Zhao, Qiansheng; Huang, Quanyi

2008-12-01

Because of their inherent advantages, Geographic Information System (GIS) and Remote Sensing (RS) are extremely useful for dealing with geographically referenced information. In the study of epidemics, most data are geographically referenced, which makes GIS and RS the perfect even necessary tools for processing, analysis, representation of epidemic data. Comprehensively considering the data requirements in the study of highly pathogenic avian influenza (HPAI) coupled with the quality of the existing remotely sensed data in terms of the resolution of space, time and spectra, the data sensed by MODIS are chosen and the relevant methods and procedures of data processing from RS and GIS for some environmental factors are proposed. Through using spatial analysis functions and Exploratory Spatial Data Analysis (ESDA) of GIS, some results of relationship between HPAI occurrences and these potential factors are presented. The role played by bird migration is also preliminarily illustrated with some operations such as visualization, overlapping etc. provided by GIS. Through the work of this paper, we conclude: Firstly, the migration of birds causes the spread of HPAI all over the country in 2004-2005. Secondly, the migration of birds is the reason why the spread of HPAI is perturbed. That is, for some classic communicable diseases, their spread exhibits obvious spatial diffusion process. However, the spread of HPAI breaks this general rule. We think leap diffusion and time lag are the probable reasons for this kind of phenomena. Potential distribution of HPAI viruses (corresponding to the distribution of flyways and putative risk sources) is not completely consistent with the occurrences of HPAI. For this phenomenon, we think, in addition to the flyways of birds, all kinds of geographical, climatic factors also have important effect on the occurrences of HPAI. Through the case study of HPAI, we can see that GIS and RS can play very important roles in the study of epidemics.

The North American Breeding Bird Survey 1966–2011: Summary analysis and species accounts

USGS Publications Warehouse

Sauer, John R.; Link, William A.; Fallon, Jane E.; Pardieck, Keith L.; Ziolkowski, David J.

2013-01-01

The North American Breeding Bird Survey is a roadside, count-based survey conducted by volunteer observers. Begun in 1966, it now is a primary source of information on spatial and temporal patterns of population change for North American birds. We analyze population change for states, provinces, Bird Conservation Regions, and the entire survey within the contiguous United States and southern Canada for 426 species using a hierarchical log-linear model that controls for observer effects in counting. We also map relative abundance and population change for each species using a spatial smoothing of data at the scale of survey routes. We present results in accounts that describe major breeding habitats, migratory status, conservation status, and population trends for each species at several geographic scales. We also present composite results for groups of species categorized by habitats and migratory status. The survey varies greatly among species in percentage of species' range covered and precision of results, but consistent patterns of decline occur among eastern forest, grassland, and aridland obligate birds while generalist bird species are increasing.

Tick infestation in birds and prevalence of pathogens in ticks collected from different places in Germany.

PubMed

Klaus, Christine; Gethmann, Jörn; Hoffmann, Bernd; Ziegler, Ute; Heller, Martin; Beer, Martin

2016-07-01

The importance of ticks and tick-borne pathogens for human and animal health has been increasing over the past decades. For their transportation and dissemination, birds may play a more important role than wingless hosts. In this study, tick infestation of birds in Germany was examined. Eight hundred ninety-two captured birds were infested with ticks and belonged to 48 different species, of which blackbirds (Turdus merula) and song thrushes (Turdus philomelos) were most strongly infested. Ground feeders were more strongly infested than non-ground feeders, sedentary birds more strongly than migratory birds, and short-distance migratory birds more strongly than long-distance migratory birds. Mean tick infestation per bird ranged between 2 (long-distance migratory bird) and 4.7 (sedentary bird), in some single cases up to 55 ticks per bird were found. With the exception of three nymphs of Haemaphysalis spp., all ticks belonged to Ixodes spp., the most frequently detected tick species was Ixodes ricinus. Birds were mostly infested by nymphs (65.1 %), followed by larvae (32.96 %). Additionally, ticks collected from birds were examined for several pathogens: Tick-borne encephalitis virus (TBEV) and Sindbisvirus with real-time RT-PCR, Flaviviruses, Simbuviruses and Lyssaviruses with broad-range standard RT-PCR-assays, and Borrelia spp. with a Pan-Borrelia real-time PCR. Interestingly, no viral pathogens could be detected, but Borrelia spp. positive ticks were collected from 76 birds. Borrelia (B.) garinii, B. valaisiaina, B. burgdorferi s.s. and B. afzelii were determined. The screening of ticks and birds for viral pathogens with broad range PCR-assays was tested and the use as an "early warning system" is discussed.

Posting Traditional Ecological Knowledge on Open Access Biodiversity Platforms: Implications for Learning Design

ERIC Educational Resources Information Center

Funk, Johanna; Guthadjaka, Kathy; Kong, Gary

2015-01-01

BowerBird is an open platform biodiversity website (http://www.BowerBird.org.au) and a nationally funded project under management of the Atlas of Living Australia (ALA) and Museum Victoria. Members post sightings and information about local species of plants and animals, and record other features of ecosystems. Charles Darwin University's Northern…

Are populations of neotropical migrant birds limited in summer or winter? implications for management

Treesearch

Thomas W. Sherry; Richard T. Holmes

1993-01-01

Understanding where in their annual cycle Neotropical-Nearctic migrant bird populations are limited is essential for developing effective management and conservation policies. A review of currently available information indicates that these long-distance migrant species may be limited by events and circumstances in both summer and winter, and possibly on migration as...

Detectability of Forest Birds from Stationary Points in Northern Wisconsin

Treesearch

Amy T. Wolf; Robert W. Howe; Gregory J. Davis

1995-01-01

Estimation of avian densities from point counts requires information about the distance at which birds can be detected by the observer. Detection distances also are important for designing the spacing of point counts in a regional sampling scheme. We examined the relationship between distance and detectability for forest songbirds in northern Wisconsin. Like previous...

77 FR 129 - Golden Eagles; Programmatic Take Permit Application; Draft Environmental Assessment; West Butte...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-03

... permit issued to a wind- energy company. Background BGEPA allows us to authorize bald eagle and golden... information by one of the following methods. Email: pacific_birds@fws.gov . Include ``DEA for the West Butte... Michael Green, Acting Chief, Division of Migratory Birds and Habitat Programs, Pacific Region, U.S. Fish...

A new species of Niditinea (Tineidae: Tineinae) with a preference for bird nests and the known larval habitats of the species in the United States

USDA-ARS?s Scientific Manuscript database

We describe and illustrate Niditinea sabroskyi new species, a species mostly associated with bird nests. We provide diagnostic information to distinguish the new species from the other two species occurring in the United States, Niditinea fuscella (Linnaeus, 1758) and Niditinea orleansella (Chambers...

Measuring the Success of Bird Conservation Plan Implementation

Treesearch

Rolf R. Koford; Jane A. Fitzgerald

2005-01-01

Partners in Flight Bird Conservation Plans (BCPs) have been under development since 1995. Plans are now available for almost all of the physiographic areas and/or states in the continental United States (BCPs can be downloaded at www.partnersinflight.org). Although the format of and information in each plan varies to some degree depending upon the region and approach...

Land manager's guide to the birds of the South

Treesearch

Paul B. Hamel

1992-01-01

Forested habitats and their suitability for bird species in the South are described. For each species, a summary of biological knowledge regarding status, distribution, and habitat requirements is presented. General and specific habitat requirements for each species are given in the form of habitat relationship matrices. This information is designed to be used by land...

77 FR 47587 - Endangered and Threatened Wildlife and Plants; Listing 38 Species on Molokai, Lanai, and Maui as...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-09

.... In addition, we propose name changes or corrections for 11 endangered plants and 2 endangered birds... revise taxonomic classifications with name changes or family changes for 11 plant species and 2 bird... Fish and Wildlife Office (see FOR FURTHER INFORMATION CONTACT). Authors The primary authors of this...

Bird Communities and Environmental Correlates in Southern Oregon and Northern California, USA.

PubMed

Stephens, Jaime L; Dinger, Eric C; Alexander, John D; Mohren, Sean R; Ralph, C John; Sarr, Daniel A

2016-01-01

We examined avian community ecology in the Klamath Ecoregion and determined that individual bird species co-exist spatially to form 29 statistically distinguishable bird groups. We identified climate, geography, and vegetation metrics that are correlated with these 29 bird groups at three scales: Klamath Ecoregion, vegetation formation (agriculture, conifer, mixed conifer/hardwood, shrubland), and National Park Service unit. Two climate variables (breeding season mean temperature and temperature range) and one geography variable (elevation) were correlated at all scales, suggesting that for some vegetation formations and park units there is sufficient variation in climate and geography to be an important driver of bird communities, a level of variation we expected only at the broader scale. We found vegetation to be important at all scales, with coarse metrics (environmental site potential and existing vegetation formation) meaningful across all scales and structural vegetation patterns (e.g. succession, disturbance) important only at the scale of vegetation formation or park unit. Additionally, we examined how well six National Park Service units represent bird communities in the broader Klamath Ecoregion. Park units are inclusive of most bird communities with the exception of the oak woodland community; mature conifer forests are well represented, primarily associated with conifer canopy and lacking multi-layered structure. Identifying environmental factors that shape bird communities at three scales within this region is important; such insights can inform local and regional land management decisions necessary to ensure bird conservation in this globally significant region.

Bird Communities and Environmental Correlates in Southern Oregon and Northern California, USA

PubMed Central

Dinger, Eric C.; Alexander, John D.; Mohren, Sean R.; Ralph, C. John; Sarr, Daniel A.

2016-01-01

We examined avian community ecology in the Klamath Ecoregion and determined that individual bird species co-exist spatially to form 29 statistically distinguishable bird groups. We identified climate, geography, and vegetation metrics that are correlated with these 29 bird groups at three scales: Klamath Ecoregion, vegetation formation (agriculture, conifer, mixed conifer/hardwood, shrubland), and National Park Service unit. Two climate variables (breeding season mean temperature and temperature range) and one geography variable (elevation) were correlated at all scales, suggesting that for some vegetation formations and park units there is sufficient variation in climate and geography to be an important driver of bird communities, a level of variation we expected only at the broader scale. We found vegetation to be important at all scales, with coarse metrics (environmental site potential and existing vegetation formation) meaningful across all scales and structural vegetation patterns (e.g. succession, disturbance) important only at the scale of vegetation formation or park unit. Additionally, we examined how well six National Park Service units represent bird communities in the broader Klamath Ecoregion. Park units are inclusive of most bird communities with the exception of the oak woodland community; mature conifer forests are well represented, primarily associated with conifer canopy and lacking multi-layered structure. Identifying environmental factors that shape bird communities at three scales within this region is important; such insights can inform local and regional land management decisions necessary to ensure bird conservation in this globally significant region. PMID:27732625

Epidemiology of avian influenza in agricultural and other man-made systems

USDA-ARS?s Scientific Manuscript database

Over thousands of years, mankind has changed the natural ecosystems of birds by domestication and their influenza A viruses (IAVs) have reassorted and adapted to new systems and hosts. At high risk for introduction of IAVs from free-living aquatic birds are outdoor reared domestic poultry, especial...

A magnetic pulse does not affect homing pigeon navigation: a GPS tracking experiment.

PubMed

Holland, Richard; Filannino, Caterina; Gagliardo, Anna

2013-06-15

The cues by which homing pigeons are able to return to a home loft after displacement to unfamiliar release sites remain debated. A number of experiments in which migratory birds have been treated with a magnetic pulse have produced a disruption in their orientation, which argues that a ferrimagnetic sense is used for navigation in birds. One previous experiment has also indicated an effect of magnetic pulses on homing pigeon navigation, although with inconsistent results. Previous studies have shown that some magnetic-related information is transmitted by the trigeminal nerve to the brain in some bird species, including the homing pigeon. The function of this information is still unclear. It has been suggested that this information is important for navigation. Previous studies with trigeminal nerve lesioned homing pigeons have clearly shown that the lack of trigeminally mediated information, even if magnetic, is not crucial for homing performance. However, this result does not completely exclude the possibility that other ferrimagnetic receptors in the homing pigeon play a role in navigation. Additionally, recent studies on homing pigeons suggested the existence of a ferrimagnetic sense in a novel location presumably located in the inner ear (lagena). In the present study, we tested whether any ferrimagnetic magnetoreceptors, irrespective of their location in the bird's head, are involved in pigeons' homing. To do this, we treated homing pigeons with a strong magnetic pulse before release, tracked birds with GPS loggers and analyzed whether this treatment affected homing performance. In the single previous magnetic pulse experiment on homing pigeons, only initial orientation at a release site was considered and the results were inconsistent. We observed no effect of the magnetic pulse at any of the sites used on initial orientation, homing performance, tortuosity or track efficiency, which does not support a role for the ferrimagnetic sense in homing pigeon navigation, at least not in this geographic area, where magnetic field variations are in the region of 200 nT intensity and 0.8 deg inclination.

"My naturesound" - nature observations with sound recordings

PubMed Central

Runnel, Veljo; Peterson, Marko; Zirk, Allan

2017-01-01

Abstract Background Online systems for observation reporting by citizen scientists have been operating for many years. iNaturalist (California Academy of Sciences 2016), eBird (Cornell Lab of Ornithology 2016) and Observado (Observation International 2016) are well-known international systems, Artportalen (Swedish Species Information Centre 2016) and Artsobservasjoner (Norwegian Biodiversity Information Centre 2016) are Scandinavian. In addition, databases and online solutions exist that are more directly research-oriented but still offer participation by citizen scientists, such as the PlutoF (University of Tartu Natural History Museum 2016) platform. The University of Tartu Natural History Museum maintains the PlutoF platform (Abarenkov et al. 2010) for storing and managing biodiversity data, including taxon observations. In 2014, development was started to integrate an observation app "Minu loodusheli"/"My naturesound" (University of Tartu Natural History Museum 2017b) (My naturesound, Fig. 1) within PlutoF system. In 2017, an English language version of the app (University of Tartu Natural History Museum 2017c) was launched that includes nearly all major sound-producing taxon groups in its taxonomy. The application also acts as a practical tool for collecting and publishing occurrence data for the Global Biodiversity Information Facility (Global Biodiversity Information Facility 2017) in standardized Darwin Core format together with download links to the multimedia files. Although the sound recording ability of mobile phones opens new opportunities to validate taxon occurrences, current technological solutions limit the use of recordings in biodiversity research. The "My naturesound" allows the user to record taxon occurrences and to provide audio recordings as evidence. After installing the application, the user is promted to login with PlutoF system credentials or to register with PlutoF. The application is targeted primarely to citizen scientists, but researchers themselves can also use it as a tool for easy annotation of taxon occurrences. New information The dataset consists observation data of birds, amphibians and insects by citizen scientists with on site audio recordings. The dataset gives the possibility to analyze the suitablility of mobile devices for recording animal vocalizations and their use in reporting. PMID:29104438

A morphological database for 606 colombian bird species.

PubMed

Montoya, Paola; Gonzalez, Mailyn A; Tenorio, Elkin A; López-Ordóñez, Juan Pablo; Pinto Gómez, Alejandro; Cueva, Diego; Acevedo Rincón, Aldemar A; Angarita Yanes, Camilo; Arango Martínez, Héctor Manuel; Armesto, Orlando; Betancur, Jefry S; Caguazango Castro, Angela; Calderon Leyton, Jhon Jairo; Calpa-Anaguano, Edna Viviana; Cárdenas-Posada, Ghislaine; Castaño Díaz, Michael; Chaparro-Herrera, Sergio; Diago-Muñoz, Nicolás; Franco Espinosa, Laura; Gómez Bernal, Luis Germán; Gonzalez-Zapata, Fanny L; Gutiérrez Zamora, Eduardo Aquiles; Gutiérrez-Zuluaga, Ana M; Lizcano Jiménez, Robinson Stivel; Lopera-Salazar, Andrea; Martínez Alvarado, Dariel; Maya Girón, Ana María; Medina, Wilderson; Montealegre-Talero, Carolina; Parra, Juan L; Pérez-Peña, Sebastián; Ramírez Ramírez, Francis; Reyes, Julián; Rivera-Gutiérrez, Héctor Fabio; Rosero Mora, Yuri; Trujillo-Torres, Carlos M; Vidal-Maldonado, Cristian Camilo; Salgado-Negret, Beatriz

2018-04-27

Colombia is the country with the highest bird diversity in the world. Despite active research in ornithology, compelling morphological information of most bird species is still sparse. However, morphological information is the baseline to understand how species respond to environmental variation and how ecosystems respond to species loss. As part of a national initiative, the Instituto Alexander von Humboldt in collaboration with twelve Colombian institutions and seven biological collections, measured up to 15 morphological traits of 9892 individuals corresponding to 606 species: 3492 from individuals captured in field and 6400 from museum specimens. Species measured are mainly distributed in high Andean forest, páramo, and wetland ecosystems. Overall, seven ornithological collections in Colombia and 18 páramo complexes throughout Colombia were visited from 2013 to 2015. The morphological traits involved measurements from bill (total and exposed culmen, bill width and depth), wing (length, area, wingspan and the distance between longest primary and longest secondary), tail (length and shape), tarsus (length), hallux (length and claw hallux) and weight. The number of measured specimens per species was variable, ranging from 1 to 321 individuals with a median of 4 individuals per species. Overall, this database gathered morphological information for more than 30% of Colombian bird diversity. No copyright, proprietary, or cost restrictions apply; the data should be cited appropriately when used. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Satellite-marked waterfowl reveal migratory connection between H5N1 outbreak areas in China and Mongolia

USGS Publications Warehouse

Prosser, D.J.; Takekawa, John Y.; Newman, S.H.; Yan, B.; Douglas, David C.; Hou, Y.; Xing, Z.; Zhang, Dongxiao; Li, T.; Li, Y.; Zhao, D.; Perry, W.M.; Palm, E.C.

2009-01-01

The role of wild birds in the spread of highly pathogenic avian influenza H5N1 has been greatly debated and remains an unresolved question. However, analyses to determine involvement of wild birds have been hindered by the lack of basic information on their movements in central Asia. Thus, we initiated a programme to document migrations of waterfowl in Asian flyways to inform hypotheses of H5N1 transmission. As part of this work, we studied migration of waterfowl from Qinghai Lake, China, site of the 2005 H5N1 outbreak in wild birds. We examined the null hypothesis that no direct migratory connection existed between Qinghai Lake and H5N1 outbreak areas in central Mongolia, as suggested by some H5N1 phylogeny studies. We captured individuals in 2007 from two of the species that died in the Qinghai Lake outbreaks and marked them with GPS satellite transmitters: Bar-headed Geese Anser indicus (n = 14) and Ruddy Shelduck Tadorna ferruginea (n = 11). Three of 25 marked birds (one Goose and two Shelducks) migrated to breeding grounds near H5N1 outbreak areas in Mongolia. Our results describe a previously unknown migratory link between the two regions and offer new critical information on migratory movements in the region. ?? 2009 British Ornithologists' Union.

Communally Nesting Migratory Birds Create Ecological Hot-Spots in Tropical Australia.

PubMed

Natusch, Daniel J D; Lyons, Jessica A; Brown, Gregory; Shine, Richard

2016-01-01

Large numbers of metallic starlings (Aplonis metallica) migrate annually from New Guinea to the rainforests of tropical Australia, where they nest communally in single emergent trees (up to 1,000 birds). These aggregations create dense and species-rich faunal "hot-spots", attracting a diverse assemblage of local consumers that utilise this seasonal resource. The starlings nested primarily in poison-dart trees (Antiaris toxicaria) near the rainforest-woodland boundary. Surveys underneath these colonies revealed that bird-derived nutrients massively increased densities of soil invertebrates and mammals (primarily wild pigs) beneath trees, year-round. Flying invertebrates, nocturnal birds, reptiles, and amphibians congregated beneath the trees when starlings were nesting (the wet-season). Diurnal birds (primarily cockatoos and bush turkeys) aggregated beneath the trees during the dry-season to utilise residual nutrients when the starlings were not nesting. The abundance of several taxa was considerably higher (to > 1000-fold) under colony trees than under nearby trees. The system strikingly resembles utilisation of bird nesting colonies by predators in other parts of the world but this spectacular system has never been described, emphasizing the continuing need for detailed natural-history studies in tropical Australia.

Communally Nesting Migratory Birds Create Ecological Hot-Spots in Tropical Australia

PubMed Central

Natusch, Daniel J. D.; Lyons, Jessica A.; Brown, Gregory; Shine, Richard

2016-01-01

Large numbers of metallic starlings (Aplonis metallica) migrate annually from New Guinea to the rainforests of tropical Australia, where they nest communally in single emergent trees (up to 1,000 birds). These aggregations create dense and species-rich faunal “hot-spots”, attracting a diverse assemblage of local consumers that utilise this seasonal resource. The starlings nested primarily in poison-dart trees (Antiaris toxicaria) near the rainforest-woodland boundary. Surveys underneath these colonies revealed that bird-derived nutrients massively increased densities of soil invertebrates and mammals (primarily wild pigs) beneath trees, year-round. Flying invertebrates, nocturnal birds, reptiles, and amphibians congregated beneath the trees when starlings were nesting (the wet-season). Diurnal birds (primarily cockatoos and bush turkeys) aggregated beneath the trees during the dry-season to utilise residual nutrients when the starlings were not nesting. The abundance of several taxa was considerably higher (to > 1000-fold) under colony trees than under nearby trees. The system strikingly resembles utilisation of bird nesting colonies by predators in other parts of the world but this spectacular system has never been described, emphasizing the continuing need for detailed natural-history studies in tropical Australia. PMID:27706197

The Predatory Bird Monitoring Scheme: identifying chemical risks to top predators in Britain.

PubMed

Walker, Lee A; Shore, Richard F; Turk, Anthony; Pereira, M Glória; Best, Jennifer

2008-09-01

The Predatory Bird Monitoring Scheme (PBMS) is a long term (>40 y), UK-wide, exposure monitoring scheme that determines the concentration of selected pesticides and pollutants in the livers and eggs of predatory birds. This paper describes how the PBMS works, and in particular highlights some of the key scientific and policy drivers for monitoring contaminants in predatory birds and describes the specific aims, scope, and methods of the PBMS. We also present previously unpublished data that illustrates how the PBMS has been used to demonstrate the success of mitigation measures in reversing chemical-mediated impacts; identify and evaluate chemical threats to species of high conservation value; and finally to inform and refine monitoring methodologies. In addition, we discuss how such schemes can also address wider conservation needs.

Forest bird monitoring protocol for strategic habitat conservation and endangered species management on O'ahu Forest National Wildlife Refuge, Island of O'ahu, Hawai'i

USGS Publications Warehouse

Camp, Richard J.; Gorresen, P. Marcos; Banko, Paul C.

2011-01-01

This report describes the results of a pilot forest bird survey and a consequent forest bird monitoring protocol that was developed for the O'ahu Forest National Wildlife Refuge, O'ahu Island, Hawai'i. The pilot survey was conducted to inform aspects of the monitoring protocol and to provide a baseline with which to compare future surveys on the Refuge. The protocol was developed in an adaptive management framework to track bird distribution and abundance and to meet the strategic habitat conservation requirements of the Refuge. Funding for this research was provided through a Science Support Partnership grant sponsored jointly by the U.S. Geological Survey (USGS) and the U.S. Fish and Wildlife Service (USFWS).

Review of the social and environmental factors affecting the behavior and welfare of turkeys (Meleagris gallopavo).

PubMed

Marchewka, J; Watanabe, T T N; Ferrante, V; Estevez, I

2013-06-01

In modern rearing systems, turkey producers often face economic losses due to increased aggression, feather pecking, cannibalism, leg disorders, or injuries among birds, which are also significant welfare issues. The main underlying causes appear to relate to rapid growth, flock size, density, poor environmental complexity, or lighting, which may be deficient in providing the birds with an adequate physical or social environment. To date, there is little information regarding the effect of these factors on turkey welfare. This knowledge is, however, essential to ensure the welfare of turkeys and to improve their quality of life, but may also be beneficial to industry, allowing better bird performance, improved carcass quality, and reduced mortality and condemnations. This paper reviews the available scientific literature related to the behavior of turkeys as influenced by the physical and social environment that may be relevant to advances toward turkey production systems that take welfare into consideration. We addressed the effects that factors such as density, group size, space availability, maturation, lightning, feeding, and transport may have over parameters that may be relevant to ensure welfare of turkeys. Available scientific studies were based in experimental environments and identified individual factors corresponding to particular welfare problems. Most of the studies aimed at finding optimal levels of rearing conditions that allow avoiding or decreasing most severe welfare issues. This paper discusses the importance of these factors for development of production environments that would be better suited from a welfare and economic point of view.

[Book review] The birds of San Diego County

USGS Publications Warehouse

Banks, R.C.

1985-01-01

San Diego County, California is larger in area than 2 of the 50 states (combined), its geographic (and thus biological) diversity ranges from the seacoast across mountains of nearly 2,000 m elevation to extreme desert, it is the southwesternmost county of the contiguous U.S., and it is inhabited by dedicated birders whose observations have boosted the county list to more than 450 species. "The Birds of San Diego County" provides detailed information on the geographic, ecological, and temporal distribution and abundance of each of the 449 species of native birds reported in the county-for some, by subspecies. Maps of breeding distribution are presented for 129 of the 181 breeding species (of which 26 are considered to be extirpated or only occasional breeders). Ecological zones and terms of abundance are defined precisely, and the definitions are adhered to. Welcomely absent are long para- graphs of descriptive and generalized information.

Photoreceptive oscillators within neurons of the premammillary nucleus (PMM) and seasonal reproduction in temperate zone birds.

PubMed

Kosonsiriluk, Sunantha; Mauro, Laura J; Chaiworakul, Voravasa; Chaiseha, Yupaporn; El Halawani, Mohamed E

2013-09-01

The pathway for light transmission regulating the reproductive neuroendocrine system in temperate zone birds remains elusive. Based on the evidence provided from our studies with female turkeys, it is suggested that the circadian clock regulating reproductive seasonality is located in putatively photosensitive dopamine-melatonin (DA-MEL) neurons residing in the premammillary nucleus (PMM) of the caudal hypothalamus. Melanopsin is expressed by these neurons; a known photopigment which mediates light information pertaining to the entrainment of the clock. Exposure to a gonad stimulatory photoperiod enhances the activity of the DAergic system within DA-MEL neurons. DAergic activity encoding the light information is transmitted to the pars tuberalis, where thyroid-stimulating hormone, beta (TSHβ) cells reside, and induces the release of TSH. TSH stimulates tanycytes lining the base of the third ventricle and activates type 2 deiodinase in the ependymal which enhances triiodothyronine (T3) synthesis. T3 facilitates the release of gonadotropin-releasing hormone-I which stimulates luteinizing hormone/follicle stimulating hormone release and gonad recrudescence. These data taken together with the findings that clock genes are rhythmically expressed in the PMM where DA-MEL neurons are localized imply that endogenous oscillators containing photoreceptors within DA-MEL neurons are important in regulating the DA and MEL rhythms that drive the circadian cycle controlling seasonal reproduction. Published by Elsevier Inc.

Bird Responses to Lowland Rainforest Conversion in Sumatran Smallholder Landscapes, Indonesia

PubMed Central

Clough, Yann; Toledo-Hernandez, Manuel; Arlettaz, Raphael; Mulyani, Yeni A.; Tscharntke, Teja

2016-01-01

Rapid land-use change in the tropics causes dramatic losses in biodiversity and associated functions. In Sumatra, Indonesia, lowland rainforest has mainly been transformed by smallholders into oil palm (Elaeis guineensis) and rubber (Hevea brasiliensis) monocultures, interspersed with jungle rubber (rubber agroforests) and a few forest remnants. In two regions of the Jambi province, we conducted point counts in 32 plots of four different land-use types (lowland rainforest, jungle rubber, rubber plantation and oil palm plantation) as well as in 16 nearby homegardens, representing a small-scale, traditional agricultural system. We analysed total bird abundance and bird abundance in feeding guilds, as well as species richness per point count visit, per plot, and per land-use system, to unveil the conservation importance and functional responses of birds in the different land-use types. In total, we identified 71 species from 24 families. Across the different land-use types, abundance did not significantly differ, but both species richness per visit and per plot were reduced in plantations. Feeding guild abundances between land-use types were variable, but homegardens were dominated by omnivores and granivores, and frugivorous birds were absent from monoculture rubber and oil palm. Jungle rubber played an important role in harbouring forest bird species and frugivores. Homegardens turned out to be of minor importance for conserving birds due to their low sizes, although collectively, they are used by many bird species. Changes in functional composition with land-use conversion may affect important ecosystem functions such as biological pest control, pollination, and seed dispersal. In conclusion, maintaining forest cover, including degraded forest and jungle rubber, is of utmost importance to the conservation of functional and taxonomic bird diversity. PMID:27224063

Bird Responses to Lowland Rainforest Conversion in Sumatran Smallholder Landscapes, Indonesia.

PubMed

Prabowo, Walesa Edho; Darras, Kevin; Clough, Yann; Toledo-Hernandez, Manuel; Arlettaz, Raphael; Mulyani, Yeni A; Tscharntke, Teja

2016-01-01

Rapid land-use change in the tropics causes dramatic losses in biodiversity and associated functions. In Sumatra, Indonesia, lowland rainforest has mainly been transformed by smallholders into oil palm (Elaeis guineensis) and rubber (Hevea brasiliensis) monocultures, interspersed with jungle rubber (rubber agroforests) and a few forest remnants. In two regions of the Jambi province, we conducted point counts in 32 plots of four different land-use types (lowland rainforest, jungle rubber, rubber plantation and oil palm plantation) as well as in 16 nearby homegardens, representing a small-scale, traditional agricultural system. We analysed total bird abundance and bird abundance in feeding guilds, as well as species richness per point count visit, per plot, and per land-use system, to unveil the conservation importance and functional responses of birds in the different land-use types. In total, we identified 71 species from 24 families. Across the different land-use types, abundance did not significantly differ, but both species richness per visit and per plot were reduced in plantations. Feeding guild abundances between land-use types were variable, but homegardens were dominated by omnivores and granivores, and frugivorous birds were absent from monoculture rubber and oil palm. Jungle rubber played an important role in harbouring forest bird species and frugivores. Homegardens turned out to be of minor importance for conserving birds due to their low sizes, although collectively, they are used by many bird species. Changes in functional composition with land-use conversion may affect important ecosystem functions such as biological pest control, pollination, and seed dispersal. In conclusion, maintaining forest cover, including degraded forest and jungle rubber, is of utmost importance to the conservation of functional and taxonomic bird diversity.

Temporal changes in the structure of a plant-frugivore network are influenced by bird migration and fruit availability

PubMed Central

Andresen, Ellen; Díaz-Castelazo, Cecilia

2016-01-01

Background. Ecological communities are dynamic collections whose composition and structure change over time, making up complex interspecific interaction networks. Mutualistic plant–animal networks can be approached through complex network analysis; these networks are characterized by a nested structure consisting of a core of generalist species, which endows the network with stability and robustness against disturbance. Those mutualistic network structures can vary as a consequence of seasonal fluctuations and food availability, as well as the arrival of new species into the system that might disorder the mutualistic network structure (e.g., a decrease in nested pattern). However, there is no assessment on how the arrival of migratory species into seasonal tropical systems can modify such patterns. Emergent and fine structural temporal patterns are adressed here for the first time for plant-frugivorous bird networks in a highly seasonal tropical environment. Methods. In a plant-frugivorous bird community, we analyzed the temporal turnover of bird species comprising the network core and periphery of ten temporal interaction networks resulting from different bird migration periods. Additionally, we evaluated how fruit abundance and richness, as well as the arrival of migratory birds into the system, explained the temporal changes in network parameters such as network size, connectance, nestedness, specialization, interaction strength asymmetry and niche overlap. The analysis included data from 10 quantitative plant-frugivorous bird networks registered from November 2013 to November 2014. Results. We registered a total of 319 interactions between 42 plant species and 44 frugivorous bird species; only ten bird species were part of the network core. We witnessed a noteworthy turnover of the species comprising the network periphery during migration periods, as opposed to the network core, which did not show significant temporal changes in species composition. Our results revealed that migration and fruit richness explain the temporal variations in network size, connectance, nestedness and interaction strength asymmetry. On the other hand, fruit abundance only explained connectance and nestedness. Discussion. By means of a fine-resolution temporal analysis, we evidenced for the first time how temporal changes in the interaction network structure respond to the arrival of migratory species into the system and to fruit availability. Additionally, few migratory bird species are important links for structuring networks, while most of them were peripheral species. We showed the relevance of studying bird–plant interactions at fine temporal scales, considering changing scenarios of species composition with a quantitative network approach. PMID:27330852

A Comprehensive Analysis of Small-Passerine Fatalities from Collision with Turbines at Wind Energy Facilities

PubMed Central

Erickson, Wallace P.; Wolfe, Melissa M.; Bay, Kimberly J.; Johnson, Douglas H.; Gehring, Joelle L.

2014-01-01

Small passerines, sometimes referred to as perching birds or songbirds, are the most abundant bird group in the United States (US) and Canada, and the most common among bird fatalities caused by collision with turbines at wind energy facilities. We used data compiled from 116 studies conducted in the US and Canada to estimate the annual rate of small-bird fatalities. It was necessary for us to calculate estimates of small-bird fatality rates from reported all-bird rates for 30% of studies. The remaining 70% of studies provided data on small-bird fatalities. We then adjusted estimates to account for detection bias and loss of carcasses from scavenging. These studies represented about 15% of current operating capacity (megawatts [MW]) for all wind energy facilities in the US and Canada and provided information on 4,975 bird fatalities, of which we estimated 62.5% were small passerines comprising 156 species. For all wind energy facilities currently in operation, we estimated that about 134,000 to 230,000 small-passerine fatalities from collision with wind turbines occur annually, or 2.10 to 3.35 small birds/MW of installed capacity. When adjusted for species composition, this indicates that about 368,000 fatalities for all bird species are caused annually by collisions with wind turbines. Other human-related sources of bird deaths, (e.g., communication towers, buildings [including windows]), and domestic cats) have been estimated to kill millions to billions of birds each year. Compared to continent-wide population estimates, the cumulative mortality rate per year by species was highest for black-throated blue warbler and tree swallow; 0.043% of the entire population of each species was estimated to annually suffer mortality from collisions with turbines. For the eighteen species with the next highest values, this estimate ranged from 0.008% to 0.038%, much lower than rates attributed to collisions with communication towers (1.2% to 9.0% for top twenty species). PMID:25222738

A comprehensive analysis of small-passerine fatalities from collisions with turbines at wind energy facilities

USGS Publications Warehouse

Erickson, Wallace P.; Wolfe, Melissa M.; Bay, Kimberly J.; Johnson, Douglas H.; Gehring, Joelle L.

2014-01-01

Small passerines, sometimes referred to as perching birds or songbirds, are the most abundant bird group in the United States (US) and Canada, and the most common among bird fatalities caused by collision with turbines at wind energy facilities. We used data compiled from 39 studies conducted in the US and Canada to estimate the annual rate of small-bird fatalities. It was necessary for us to calculate estimates of small-bird fatality rates from reported all-bird rates for 30% of studies. The remaining 70% of studies provided data on small-bird fatalities. We then adjusted estimates to account for detection bias and loss of carcasses from scavenging. These studies represented about 15% of current operating capacity (megawatts [MW]) for all wind energy facilities in the US and Canada and provided information on 4,975 bird fatalities, of which we estimated 62.5% were small passerines comprising 156 species. For all wind energy facilities currently in operation, we estimated that about 134,000 to 230,000 small-passerine fatalities from collision with wind turbines occur annually, or 2.10 to 3.35 small birds/MW of installed capacity. When adjusted for species composition, this indicates that about 368,000 fatalities for all bird species are caused annually by collisions with wind turbines. Other human-related sources of bird deaths, (e.g., communication towers, buildings [including windows]), and domestic cats) have been estimated to kill millions to billions of birds each year. Compared to continent-wide population estimates, the cumulative mortality rate per year by species was highest for black-throated blue warbler and tree swallow; 0.043% of the entire population of each species was estimated to annually suffer mortality from collisions with turbines. For the eighteen species with the next highest values, this estimate ranged from 0.008% to 0.038%, much lower than rates attributed to collisions with communication towers (1.2% to 9.0% for top twenty species).

Evidence of low toxicity of oil sands process-affected water to birds invites re-evaluation of avian protection strategies

PubMed Central

Beck, Elizabeth M.; Smits, Judit E. G.; St Clair, Colleen Cassady

2015-01-01

Exposure to water containing petroleum waste products can generate both overt and subtle toxicological responses in wildlife, including birds. Such exposure can occur in the tailings ponds of the mineable oil sands, which are located in Alberta, Canada, under a major continental flyway for waterfowl. Over the 40 year history of the industry, a few thousand bird deaths have been reported following contact with bitumen on the ponds, but a new monitoring programme demonstrated that many thousands of birds land annually without apparent harm. This new insight creates an urgent need for more information on the sublethal effects on birds from non-bitumen toxicants that occur in the water, including naphthenic acids, polycyclic aromatic hydrocarbons, heavy metals and salts. Ten studies have addressed the effects of oil sands process-affected water (OSPW), and none reported acute or substantial adverse health effects. Interpretive caution is warranted, however, because nine of the studies addressed reclaimed wetlands that received OSPW, not OSPW ponds per se, and differences between experimental and reference sites may have been reduced by shared sources of pollution in the surrounding air and water. Two studies examined eggs of birds nesting >100 km from the mine sites. Only one study exposed birds directly and repeatedly to OSPW and found no consistent differences between treated and control birds in blood-based health metrics. If it is true that aged forms of OSPW do not markedly affect the health of birds that land briefly on the ponds, then the extensiveness of current bird-deterrent programmes is unwarranted and could exert negative net environmental effects. More directed research on bird health is urgently needed, partly because birds that land on these ponds subsequently migrate to destinations throughout North America where they are consumed by both humans and wildlife predators. PMID:27293723

Evidence of low toxicity of oil sands process-affected water to birds invites re-evaluation of avian protection strategies.

PubMed

Beck, Elizabeth M; Smits, Judit E G; St Clair, Colleen Cassady

2015-01-01

Exposure to water containing petroleum waste products can generate both overt and subtle toxicological responses in wildlife, including birds. Such exposure can occur in the tailings ponds of the mineable oil sands, which are located in Alberta, Canada, under a major continental flyway for waterfowl. Over the 40 year history of the industry, a few thousand bird deaths have been reported following contact with bitumen on the ponds, but a new monitoring programme demonstrated that many thousands of birds land annually without apparent harm. This new insight creates an urgent need for more information on the sublethal effects on birds from non-bitumen toxicants that occur in the water, including naphthenic acids, polycyclic aromatic hydrocarbons, heavy metals and salts. Ten studies have addressed the effects of oil sands process-affected water (OSPW), and none reported acute or substantial adverse health effects. Interpretive caution is warranted, however, because nine of the studies addressed reclaimed wetlands that received OSPW, not OSPW ponds per se, and differences between experimental and reference sites may have been reduced by shared sources of pollution in the surrounding air and water. Two studies examined eggs of birds nesting >100 km from the mine sites. Only one study exposed birds directly and repeatedly to OSPW and found no consistent differences between treated and control birds in blood-based health metrics. If it is true that aged forms of OSPW do not markedly affect the health of birds that land briefly on the ponds, then the extensiveness of current bird-deterrent programmes is unwarranted and could exert negative net environmental effects. More directed research on bird health is urgently needed, partly because birds that land on these ponds subsequently migrate to destinations throughout North America where they are consumed by both humans and wildlife predators.

A comprehensive analysis of small-passerine fatalities from collision with turbines at wind energy facilities.

PubMed

Erickson, Wallace P; Wolfe, Melissa M; Bay, Kimberly J; Johnson, Douglas H; Gehring, Joelle L

2014-01-01

Small passerines, sometimes referred to as perching birds or songbirds, are the most abundant bird group in the United States (US) and Canada, and the most common among bird fatalities caused by collision with turbines at wind energy facilities. We used data compiled from 116 studies conducted in the US and Canada to estimate the annual rate of small-bird fatalities. It was necessary for us to calculate estimates of small-bird fatality rates from reported all-bird rates for 30% of studies. The remaining 70% of studies provided data on small-bird fatalities. We then adjusted estimates to account for detection bias and loss of carcasses from scavenging. These studies represented about 15% of current operating capacity (megawatts [MW]) for all wind energy facilities in the US and Canada and provided information on 4,975 bird fatalities, of which we estimated 62.5% were small passerines comprising 156 species. For all wind energy facilities currently in operation, we estimated that about 134,000 to 230,000 small-passerine fatalities from collision with wind turbines occur annually, or 2.10 to 3.35 small birds/MW of installed capacity. When adjusted for species composition, this indicates that about 368,000 fatalities for all bird species are caused annually by collisions with wind turbines. Other human-related sources of bird deaths, (e.g., communication towers, buildings [including windows]), and domestic cats) have been estimated to kill millions to billions of birds each year. Compared to continent-wide population estimates, the cumulative mortality rate per year by species was highest for black-throated blue warbler and tree swallow; 0.043% of the entire population of each species was estimated to annually suffer mortality from collisions with turbines. For the eighteen species with the next highest values, this estimate ranged from 0.008% to 0.038%, much lower than rates attributed to collisions with communication towers (1.2% to 9.0% for top twenty species).

Developmental Experience Alters Information Coding in Auditory Midbrain and Forebrain Neurons

PubMed Central

Woolley, Sarah M. N.; Hauber, Mark E.; Theunissen, Frederic E.

2010-01-01

In songbirds, species identity and developmental experience shape vocal behavior and behavioral responses to vocalizations. The interaction of species identity and developmental experience may also shape the coding properties of sensory neurons. We tested whether responses of auditory midbrain and forebrain neurons to songs differed between species and between groups of conspecific birds with different developmental exposure to song. We also compared responses of individual neurons to conspecific and heterospecific songs. Zebra and Bengalese finches that were raised and tutored by conspecific birds, and zebra finches that were cross-tutored by Bengalese finches were studied. Single-unit responses to zebra and Bengalese finch songs were recorded and analyzed by calculating mutual information, response reliability, mean spike rate, fluctuations in time-varying spike rate, distributions of time-varying spike rates, and neural discrimination of individual songs. Mutual information quantifies a response’s capacity to encode information about a stimulus. In midbrain and forebrain neurons, mutual information was significantly higher in normal zebra finch neurons than in Bengalese finch and cross-tutored zebra finch neurons, but not between Bengalese finch and cross-tutored zebra finch neurons. Information rate differences were largely due to spike rate differences. Mutual information did not differ between responses to conspecific and heterospecific songs. Therefore, neurons from normal zebra finches encoded more information about songs than did neurons from other birds, but conspecific and heterospecific songs were encoded equally. Neural discrimination of songs and mutual information were highly correlated. Results demonstrate that developmental exposure to vocalizations shapes the information coding properties of songbird auditory neurons. PMID:20039264

Health hazards to wild birds and risk factors associated with anthropogenic food provisioning

PubMed Central

Robinson, Robert A.; Risely, Kate; MacDonald, Susan

2018-01-01

Provision of supplementary food for wild birds at garden feeding stations is a common, large-scale and year-round practice in multiple countries including Great Britain (GB). While these additional dietary resources can benefit wildlife, there is a concomitant risk of disease transmission, particularly when birds repeatedly congregate in the same place at high densities and through interactions of species that would not normally associate in close proximity. Citizen science schemes recording garden birds are popular and can integrate disease surveillance with population monitoring, offering a unique opportunity to explore inter-relationships between supplementary feeding, disease epidemiology and population dynamics. Here, we present findings from a national surveillance programme in GB and note the dynamism of endemic and emerging diseases over a 25-year period, focusing on protozoal (finch trichomonosis), viral (Paridae pox) and bacterial (passerine salmonellosis) diseases with contrasting modes of transmission. We also examine the occurrence of mycotoxin contamination of food residues in bird feeders, which present both a direct and indirect (though immunosuppression) risk to wild bird health. Our results inform evidence-based mitigation strategies to minimize anthropogenically mediated health hazards, while maintaining the benefits of providing supplementary food for wild birds. This article is part of the theme issue ‘Anthropogenic resource subsidies and host–parasite dynamics in wildlife’. PMID:29531146

Bird Diversity and Distribution in relation to Urban Landscape Types in Northern Rwanda

PubMed Central

Gatesire, T.; Nsabimana, D.; Nyiramana, A.; Seburanga, J. L.; Mirville, M. O.

2014-01-01

Using the point count method, linear mixed models, Shannon's diversity index, and Bray-Curtis cluster analysis, we conducted a study of the effect of urban fabric layout on bird diversity and distribution in northern Rwanda. The results showed a significant effect of city landscapes on bird richness and relative abundance; residential neighborhoods, institutional grounds, and informal settlements had the highest species diversity in comparison to other microlandscape types. Riversides were characterized by specialized bird species, commonly known to be restricted to wetland environments. Built-up areas and open field landscapes had comparable results. One Albertine Rift endemic bird species, the Ruwenzori Double-collared Sunbird (Cinnyris stuhlmanni), was recorded. Three migratory birds were found in Musanze city for the first time: the Common Sandpiper (Actitis hypoleucos), the Spotted Flycatcher (Muscicapa striata), and the Willow Warbler (Phylloscopus trochilus). Two bird species have not been previously reported in Rwanda: the Garden Warbler (Sylvia borin) and the Lesser Spotted Eagle (Aquila pomarina). The implications of this study are particularly relevant to urban decision makers who should consider the existence of a great diversity of avian fauna when developing and implementing master plans, especially when villages and cities are in proximity of protected areas or natural reserves. PMID:25133203

Mapping Seabird Sensitivity to Offshore Wind Farms

PubMed Central

Bradbury, Gareth; Trinder, Mark; Furness, Bob; Banks, Alex N.; Caldow, Richard W. G.; Hume, Duncan

2014-01-01

We present a Geographic Information System (GIS) tool, SeaMaST (Seabird Mapping and Sensitivity Tool), to provide evidence on the use of sea areas by seabirds and inshore waterbirds in English territorial waters, mapping their relative sensitivity to offshore wind farms. SeaMaST is a freely available evidence source for use by all connected to the offshore wind industry and will assist statutory agencies in assessing potential risks to seabird populations from planned developments. Data were compiled from offshore boat and aerial observer surveys spanning the period 1979–2012. The data were analysed using distance analysis and Density Surface Modelling to produce predicted bird densities across a grid covering English territorial waters at a resolution of 3 km×3 km. Coefficients of Variation were estimated for each grid cell density, as an indication of confidence in predictions. Offshore wind farm sensitivity scores were compiled for seabird species using English territorial waters. The comparative risks to each species of collision with turbines and displacement from operational turbines were reviewed and scored separately, and the scores were multiplied by the bird density estimates to produce relative sensitivity maps. The sensitivity maps reflected well the amassed distributions of the most sensitive species. SeaMaST is an important new tool for assessing potential impacts on seabird populations from offshore development at a time when multiple large areas of development are proposed which overlap with many seabird species’ ranges. It will inform marine spatial planning as well as identifying priority areas of sea usage by marine birds. Example SeaMaST outputs are presented. PMID:25210739

Mapping seabird sensitivity to offshore wind farms.

PubMed

Bradbury, Gareth; Trinder, Mark; Furness, Bob; Banks, Alex N; Caldow, Richard W G; Hume, Duncan

2014-01-01

We present a Geographic Information System (GIS) tool, SeaMaST (Seabird Mapping and Sensitivity Tool), to provide evidence on the use of sea areas by seabirds and inshore waterbirds in English territorial waters, mapping their relative sensitivity to offshore wind farms. SeaMaST is a freely available evidence source for use by all connected to the offshore wind industry and will assist statutory agencies in assessing potential risks to seabird populations from planned developments. Data were compiled from offshore boat and aerial observer surveys spanning the period 1979-2012. The data were analysed using distance analysis and Density Surface Modelling to produce predicted bird densities across a grid covering English territorial waters at a resolution of 3 km×3 km. Coefficients of Variation were estimated for each grid cell density, as an indication of confidence in predictions. Offshore wind farm sensitivity scores were compiled for seabird species using English territorial waters. The comparative risks to each species of collision with turbines and displacement from operational turbines were reviewed and scored separately, and the scores were multiplied by the bird density estimates to produce relative sensitivity maps. The sensitivity maps reflected well the amassed distributions of the most sensitive species. SeaMaST is an important new tool for assessing potential impacts on seabird populations from offshore development at a time when multiple large areas of development are proposed which overlap with many seabird species' ranges. It will inform marine spatial planning as well as identifying priority areas of sea usage by marine birds. Example SeaMaST outputs are presented.

Carrying capacity for species richness as context for conservation: a case study of North American birds

Treesearch

Andrew J. Hansen; Linda Bowers Phillips; Curtis H. Flather; Jim Robinson-Cox

2011-01-01

We evaluated the leading hypotheses on biophysical factors affecting species richness for Breeding Bird Survey routes from areas with little influence of human activities.We then derived a best model based on information theory, and used this model to extrapolate SK across North America based on the biophysical predictor variables. The predictor variables included the...

Characteristics of aspen infected with heartrot: Implications for cavity-nesting birds

Treesearch

Chris Witt

2010-01-01

Phellinus tremulae is an important fungal decay agent common to aspen and a critical component to the cavity-nesting bird complex found in western aspen stands. Little information exists on the conditions that facilitate infection and spread of P. tremulae in aspen forests. I used Forest Inventory and Analysis (FIA) data to explore the relationships of several tree and...

Resumes of the Bird mission

NASA Astrophysics Data System (ADS)

Lorenz, E.; Borwald, W.; Briess, K.; Kayal, H.; Schneller, M.; Wuensten, Herbert

2004-11-01

The DLR micro satellite BIRD (Bi-spectral Infra Red Detection) was piggy- back launched with the Indian Polar Satellite Launch Vehicle PSLV-C3 into a 570 km circular sun-synchronous orbit on 22 October 2001. The BIRD mission, fully funded by the DLR, answers topical technological and scientific questions related to the operation of a compact infra- red push-broom sensor system on board of a micro satellite and demonstrates new spacecraft bus technologies. BIRD mission control is conducted by DLR / GSOC in Oberpfaffenhofen. Commanding, data reception and data processing is performed via ground stations in Weilheim and Neustrelitz (Germany). The BIRD mission is a demonstrator for small satellite projects dedicated to the hazard detection and monitoring. In the year 2003 BIRD has been used in the ESA project FUEGOSAT to demonstrate the utilisation of innovative space technologies for fire risk management.

Nocturnal migratory songbirds adjust their travelling direction aloft: evidence from a radiotelemetry and radar study

PubMed Central

Sjöberg, Sissel; Nilsson, Cecilia

2015-01-01

In order to fully understand the orientation behaviour of migrating birds, it is important to understand when birds set their travel direction. Departure directions of migratory passerines leaving stopover sites are often assumed to reflect the birds' intended travel directions, but this assumption has not been critically tested. We used data from an automated radiotelemetry system and a tracking radar at Falsterbo peninsula, Sweden, to compare the initial orientation of departing songbirds (recorded by radiotelemetry) with the orientation of songbird migrants in climbing and level flight (recorded by radar). We found that the track directions of birds at high altitudes and in level flight were more concentrated than the directions of departing birds and birds in climbing flight, which indicates that the birds adjust their travelling direction once aloft. This was further supported by a wide scatter of vanishing bearings in a subsample of radio-tracked birds that later passed an offshore radio receiver station 50 km southeast of Falsterbo. Track directions seemed to be more affected by winds in climbing compared with level flights, which may be explained by birds not starting to partially compensate for wind drift until they have reached cruising altitudes. PMID:26085501

Encountering bird alarms in full-stare IRSTs

NASA Astrophysics Data System (ADS)

de Jong, Arie N.; Winkel, Hans; Kemp, Rob A. W.

2000-12-01

Birds are a potential source of frequent false alarms in Infrared Search and Track (IRST) systems. One reason is that the signals, generated by birds at short ranges (1-2 km) in IR sensors may be of the same magnitude as the signals generated by real targets (missiles) at long ranges (10-20 km). Another reason is that new generations of IRSTs have more sensitivity which brings more birds within the detection range. Furthermore military operations tend to be held more and more in coastal zones, where the frequency of occurrence of birds is greater than in the open ocean. Finally, the variety in type of birds and their flight characteristics and signature is larger. In the paper attention is spent on the IR signatures of birds in various backgrounds, including rapid variations in signature due to wing motions. Basically, these fluctuations and the flight pattern of a bird provide opportunities to encounter bird alarms in next generation IRSTs, using multiple Focal Plan Array cameras with high frame rates. One has to take into account in this process the difference between signal variations due to wing motions and scintillation for long range targets above the horizon.

Geographic analysis of species richness and community attributes of forest birds from survey data in the mid-Atlantic integrated assessment region

USGS Publications Warehouse

Cam, E.; Sauer, J.R.; Nichols, J.D.; Hines, J.E.; Flather, C.H.

2000-01-01

Species richness of local communities is a state variable commonly used in community ecology and conservation biology. Investigation of spatial and temporal variations in richness and identification of factors associated with these variations form a basis for specifying management plans, evaluating these plans, and for testing hypotheses of theoretical interest. However, estimation of species richness is not trivial: species can be missed by investigators during sampling sessions. Sampling artifacts can lead to erroneous conclusions on spatial and temporal variation in species richness. Here we use data from the North American Breeding Bird Survey to estimate parameters describing the state of bird communities in the Mid-Atlantic Assessment (MAIA) region: species richness, extinction probability, turnover and relative species richness. We use a recently developed approach to estimation of species richness and related parameters that does not require the assumption that all the species are detected during sampling efforts. The information presented here is intended to visualize the state of bird communities in the MAIA region. We provide information on 1975 and 1990. We also quantified the changes between these years. We summarized and mapped the community attributes at a scale of management interest (watershed units).

Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution

PubMed Central

Griffin, Darren K; Robertson, Lindsay B; Tempest, Helen G; Vignal, Alain; Fillon, Valérie; Crooijmans, Richard PMA; Groenen, Martien AM; Deryusheva, Svetlana; Gaginskaya, Elena; Carré, Wilfrid; Waddington, David; Talbot, Richard; Völker, Martin; Masabanda, Julio S; Burt, Dave W

2008-01-01

Background Comparative genomics is a powerful means of establishing inter-specific relationships between gene function/location and allows insight into genomic rearrangements, conservation and evolutionary phylogeny. The availability of the complete sequence of the chicken genome has initiated the development of detailed genomic information in other birds including turkey, an agriculturally important species where mapping has hitherto focused on linkage with limited physical information. No molecular study has yet examined conservation of avian microchromosomes, nor differences in copy number variants (CNVs) between birds. Results We present a detailed comparative cytogenetic map between chicken and turkey based on reciprocal chromosome painting and mapping of 338 chicken BACs to turkey metaphases. Two inter-chromosomal changes (both involving centromeres) and three pericentric inversions have been identified between chicken and turkey; and array CGH identified 16 inter-specific CNVs. Conclusion This is the first study to combine the modalities of zoo-FISH and array CGH between different avian species. The first insight into the conservation of microchromosomes, the first comparative cytogenetic map of any bird and the first appraisal of CNVs between birds is provided. Results suggest that avian genomes have remained relatively stable during evolution compared to mammalian equivalents. PMID:18410676

Communicating food safety, authenticity and consumer choice. Field experiences.

PubMed

Syntesa, Heiner Lehr

2013-04-01

The paper reviews patented and non-patented technologies, methods and solutions in the area of food traceability. It pays special attention to the communication of food safety, authenticity and consumer choice. Twenty eight recent patents are reviewed in the areas of (secure) identification, product freshness indicators, meat traceability, (secure) transport of information along the supply chain, country/region/place of origin, automated authentication, supply chain management systems, consumer interaction systems. In addition, solutions and pilot projects are described in the areas of Halal traceability, traceability of bird's nests, cold chain management, general food traceability and other areas.

Comparison of the replication and transmissibility of an infectious laryngotracheitis virus vaccine delivered via eye-drop or drinking-water.

PubMed

Coppo, Mauricio J C; Devlin, Joanne M; Noormohammadi, Amir H

2012-01-01

Live attenuated vaccines have been extensively used to control infectious laryngotracheitis (ILT). Most vaccines are registered/recommended for use via eye-drop although vaccination via drinking-water is commonly used in the field. Drinking-water vaccination has been associated with non-uniform protection. Bird-to-bird passage of chick-embryo-origin (CEO) ILT vaccines has been shown to result in reversion to virulence. The purpose of the present study was to examine the replication and transmission of a commercial CEO infectious laryngotracheitis virus (ILTV) vaccine strain following drinking-water or eye-drop inoculation. Two groups of 10 specific-pathogen-free chickens were each vaccinated with Serva ILTV vaccine strain either via eye-drop or drinking-water. Groups of four or five unvaccinated birds were placed in contact with vaccinated birds at regular intervals. Tracheal swabs were collected every 4 days from vaccinated and in-contact birds to assess viral replication and transmission using quantitative polymerase chain reaction. Compared with eye-drop-vaccinated birds, drinking-water-vaccinated birds showed delayed viral replication but had detectable viral DNA for a longer period of time. Transmission to chickens exposed by contact on day 0 of the experiments was similar in both groups. Birds exposed to ILTV by contact with eye-drop vaccinated birds on days 4, 8, 12 and 16 of the experiment had detectable ILTV for up to 8 days post exposure. ILTV was not detected in chickens that were exposed by contact with drinking-water vaccinated birds on day 12 of the experiment or later. Results from this study provide valuable practical information for the use of ILT vaccine.

Aquatic bird disease and mortality as an indicator of changing ecosystem health

USGS Publications Warehouse

Newman, S.H.; Chmura, A.; Converse, K.; Kilpatrick, A.M.; Patel, N.; Lammers, E.; Daszak, P.

2007-01-01

We analyzed data from pathologic investigations in the United States, collected by the USGS National Wildlife Health Center between 1971 and 2005, into aquatic bird mortality events. A total of 3619 mortality events was documented for aquatic birds, involving at least 633 708 dead birds from 158 species belonging to 23 families. Environmental causes accounted for the largest proportion of mortality events (1737 or 48%) and dead birds (437 258 or 69%); these numbers increased between 1971 and 2000, with biotoxin mortalities due to botulinum intoxication (Types C and E) being the leading cause of death. Infectious diseases were the second leading cause of mortality events (20%) and dead birds (20 %), with both viral diseases, including duck plague (Herpes virus), paramyxovirus of cormorants (Paramyxovirus PMV1) and West Nile virus (Flavivirus), and bacterial diseases, including avian cholera (Pasteurella multocida), chlamydiosis (Chalmydia psittici), and salmonellosis (Salmonella sp.), contributing. Pelagic, coastal marine birds and species that use marine and freshwater habitats were impacted most frequently by environmental causes of death, with biotoxin exposure, primarily botulinum toxin, resulting in mortalities of both coastal and freshwater species. Pelagic birds were impacted most severely by emaciation and starvation, which may reflect increased anthropogenic pressure on the marine habitat from over-fishing, pollution, and other factors. Our study provides important information on broad trends in aquatic bird mortality and highlights how long-term wildlife disease studies can be used to identify anthropogenic threats to wildlife conservation and ecosystem health. In particular, mortality data for the past 30 yr suggest that biotoxins, viral, and bacterial diseases could have impacted >5 million aquatic birds. ?? Inter-Research 2007.

Local knowledge and exploitation of the avian fauna by a rural community in the semi-arid zone of northeastern Brazil.

PubMed

Teixeira, Pedro Hudson Rodrigues; Thel, Thiago do Nascimento; Ferreira, Jullio Marques Rocha; de Azevedo, Severino Mendes; Junior, Wallace Rodrigues Telino; Lyra-Neves, Rachel Maria

2014-12-24

The present study examined the exploitation of bird species by the residents of a rural community in the Brazilian semi-arid zone, and their preferences for species with different characteristics. The 24 informants were identified using the "snowball" approach, and were interviewed using semi-structured questionnaires and check-sheets for the collection of data on their relationship with the bird species that occur in the region. The characteristics that most attract the attention of the interviewees were the song and the coloration of the plumage of a bird, as well as its body size, which determines its potential as a game species, given that hunting is an important activity in the region. A total of 98 species representing 32 families (50.7% of the species known to occur in the region) were reported during interviews, being used for meat, pets, and medicinal purposes. Three species were used as zootherapeutics - White-naped Jay was eaten whole as a cure for speech problems, the feathers of Yellow-legged Tinamou were used for snakebite, Smooth-billed Ani was eaten for "chronic cough" and Small-billed Tinamou and Tataupa Tinamou used for locomotion problems. The preference of the informants for characteristics such as birdsong and colorful plumage was a significant determinant of their preference for the species exploited. Birds with cynegetic potential and high use values were also among the most preferred species. Despite the highly significant preferences for certain species, some birds, such as those of the families Trochilidae, Thamnophilidae, and Tyrannidae are hunted randomly, independently of their attributes. The evidence collected on the criteria applied by local specialists for the exploitation of the bird fauna permitted the identification of the species that suffer hunting pressure, providing guidelines for the development of conservation and management strategies that will guarantee the long-term survival of the populations of these bird species in the region.

Bird mortality during nocturnal migration over Lake Michigan: A case study

USGS Publications Warehouse

Diehl, Robert H.; Bates, John M.; Willard, David E.; Gnoske, Thomas P.

2014-01-01

Millions of birds die each year during migration. Most of this mortality goes unobserved and conditions surrounding the actual events are often not thoroughly documented. We present a case study of substantial migrant casualties along the shores of southwestern Lake Michigan during May 1996 when we found 2,981 dead birds of 114 species, mostly migrant passerines. An unusual sequence of events allowed us to document the circumstances surrounding this migratory bird kill. Bird carcasses appeared on the southwestern shores of Lake Michigan in the days following storm systems that produced high rain and in one case, hail. Encounters between birds and precipitation over open water were recorded by weather radar, and were followed by winds that drifted dead birds toward highly populated shorelines where the kill was observed and documented. Climatologically, May 1996 was exceptional for producing weather conditions that both killed birds en masse and allowed the mortality to be documented. As a result, this is one of the more thoroughly documented instances of a weather-related mass mortality event during migration.

Effects of haying on breeding birds in CRP grasslands

USGS Publications Warehouse

Igl, Lawrence D.; Johnson, Douglas H.

2016-01-01

The Conservation Reserve Program (CRP) is a voluntary program that is available to agricultural producers to help protect environmentally sensitive or highly erodible land. Management disturbances of CRP grasslands generally are not allowed unless authorized to provide relief to livestock producers during severe drought or a similar natural disaster (i.e., emergency haying and grazing) or to improve the quality and performance of the CRP cover (i.e., managed haying and grazing). Although CRP grasslands may not be hayed or grazed during the primary bird-nesting season, these disturbances may have short-term (1 yr after disturbance) and long-term (≥2 yr after disturbance) effects on grassland bird populations. We assessed the effects of haying on 20 grassland bird species in 483 CRP grasslands in 9 counties of 4 states in the northern Great Plains, USA between 1993 and 2008. We compared breeding bird densities (as determined by total-area counts) in idle and hayed fields to evaluate changes 1, 2, 3, and 4 years after haying. Haying of CRP grasslands had either positive or negative effects on grassland birds, depending on the species, the county, and the number of years after the initial disturbance. Some species (e.g., horned lark [Eremophila alpestris], bobolink [Dolichonyx oryzivorus]) responded positively after haying, and others (e.g., song sparrow [Melospiza melodia]) responded negatively. The responses of some species changed direction as the fields recovered from haying. For example, densities for common yellowthroat (Geothlypis trichas), sedge wren (Cistothorus platensis), and clay-colored sparrow (Spizella pallida) declined the first year after haying but increased in the subsequent 3 years. Ten species showed treatment × county interactions, indicating that the effects of haying varied geographically. This long-term evaluation on the effects of haying on breeding birds provides important information on the strength and direction of changes in bird populations following a disturbance. Results from this study can help guide management of CRP and other grasslands and inform future agricultural programs that address biomass energy production. © 2016 This article is a U.S. Government work and is in the public domain in the USA.

Conserving migratory land birds in the New World: Do we know enough?

USGS Publications Warehouse

Faaborg, John; Holmes, Richard T.; Anders, A.D.; Bildstein, K.L.; Dugger, K.M.; Gauthreaux, S.A.; Heglund, P.; Hobson, K.A.; Jahn, A.E.; Johnson, D.H.; Latta, S.C.; Levey, D.J.; Marra, P.P.; Merkord, C.L.; Nol, E.; Rothstein, S.I.; Sherry, T.W.; Scott, Sillett T.; Thompson, F. R.; Warnock, N.

2010-01-01

Migratory bird needs must be met during four phases of the year: breeding season, fall migration, wintering, and spring migration; thus, management may be needed during all four phases. The bulk of research and management has focused on the breeding season, although several issues remain unsettled, including the spatial extent of habitat influences on fitness and the importance of habitat on the breeding grounds used after breeding. Although detailed investigations have shed light on the ecology and population dynamics of a few avian species, knowledge is sketchy for most species. Replication of comprehensive studies is needed for multiple species across a range of areas. Information deficiencies are even greater during the wintering season, when birds require sites that provide security and food resources needed for survival and developing nutrient reserves for spring migration and, possibly, reproduction. Research is needed on many species simply to identify geographic distributions, wintering sites, habitat use, and basic ecology. Studies are complicated, however, by the mobility of birds and by sexual segregation during winter. Stable-isotope methodology has offered an opportunity to identify linkages between breeding and wintering sites, which facilitates understanding the complete annual cycle of birds. The twice-annual migrations are the poorest-understood events in a bird's life. Migration has always been a risky undertaking, with such anthropogenic features as tall buildings, towers, and wind generators adding to the risk, Species such as woodland specialists migrating through eastern North America have numerous options for pausing during migration to replenish nutrients, but some species depend on limited stopover locations. Research needs for migration include identifying pathways and timetables of migration, quality and distribution of habitats, threats posed by towers and other tall structures, and any bottlenecks for migration. Issues such as human population growth, acid deposition, climate change, and exotic diseases are global concerns with uncertain consequences to migratory birds and even lesscertain remedies. Despite enormous gaps in our understanding of these birds, research, much of it occurring in the past 30 years, has provided sufficient information to make intelligent conservation efforts but needs to expand to handle future challenges. ?? 2010 by the Ecological Society of America.

Conserving migratory land birds in the new world: do we know enough?

PubMed

Faaborg, John; Holmes, Richard T; Anders, Angela D; Bildstein, Keith L; Dugger, Katie M; Gauthreaux, Sidney A; Heglund, Patricia; Hobson, Keith A; Jahn, Alex E; Johnson, Douglas H; Latta, Steven C; Levey, Douglas J; Marra, Peter P; Merkord, Christopher L; Nol, Erica; Rothstein, Stephen I; Sherry, Thomas W; Sillett, T Scott; Thompson, Frank R; Warnock, Nils

2010-03-01

Migratory bird needs must be met during four phases of the year: breeding season, fall migration, wintering, and spring migration; thus, management may be needed during all four phases. The bulk of research and management has focused on the breeding season, although several issues remain unsettled, including the spatial extent of habitat influences on fitness and the importance of habitat on the breeding grounds used after breeding. Although detailed investigations have shed light on the ecology and population dynamics of a few avian species, knowledge is sketchy for most species. Replication of comprehensive studies is needed for multiple species across a range of areas, Information deficiencies are even greater during the wintering season, when birds require sites that provide security and food resources needed for survival and developing nutrient reserves for spring migration and, possibly, reproduction. Research is needed on many species simply to identify geographic distributions, wintering sites, habitat use, and basic ecology. Studies are complicated, however, by the mobility of birds and by sexual segregation during winter. Stable-isotope methodology has offered an opportunity to identify linkages between breeding and wintering sites, which facilitates understanding the complete annual cycle of birds. The twice-annual migrations are the poorest-understood events in a bird's life. Migration has always been a risky undertaking, with such anthropogenic features as tall buildings, towers, and wind generators adding to the risk. Species such as woodland specialists migrating through eastern North America have numerous options for pausing during migration to replenish nutrients, but some species depend on limited stopover locations. Research needs for migration include identifying pathways and timetables of migration, quality and distribution of habitats, threats posed by towers and other tall structures, and any bottlenecks for migration. Issues such as human population growth, acid deposition, climate change, and exotic diseases are global concerns with uncertain consequences to migratory birds and even less-certain remedies. Despite enormous gaps in our understanding of these birds, research, much of it occurring in the past 30 years, has provided sufficient information to make intelligent conservation efforts but needs to expand to handle future challenges.

Anatomical Specializations for Nocturnality in a Critically Endangered Parrot, the Kakapo (Strigops habroptilus)

PubMed Central

Corfield, Jeremy R.; Gsell, Anna C.; Brunton, Dianne; Heesy, Christopher P.; Hall, Margaret I.; Acosta, Monica L.; Iwaniuk, Andrew N.

2011-01-01

The shift from a diurnal to nocturnal lifestyle in vertebrates is generally associated with either enhanced visual sensitivity or a decreased reliance on vision. Within birds, most studies have focused on differences in the visual system across all birds with respect to nocturnality-diurnality. The critically endangered Kakapo (Strigops habroptilus), a parrot endemic to New Zealand, is an example of a species that has evolved a nocturnal lifestyle in an otherwise diurnal lineage, but nothing is known about its' visual system. Here, we provide a detailed morphological analysis of the orbits, brain, eye, and retina of the Kakapo and comparisons with other birds. Morphometric analyses revealed that the Kakapo's orbits are significantly more convergent than other parrots, suggesting an increased binocular overlap in the visual field. The Kakapo exhibits an eye shape that is consistent with other nocturnal birds, including owls and nightjars, but is also within the range of the diurnal parrots. With respect to the brain, the Kakapo has a significantly smaller optic nerve and tectofugal visual pathway. Specifically, the optic tectum, nucleus rotundus and entopallium were significantly reduced in relative size compared to other parrots. There was no apparent reduction to the thalamofugal visual pathway. Finally, the retinal morphology of the Kakapo is similar to that of both diurnal and nocturnal birds, suggesting a retina that is specialised for a crepuscular niche. Overall, this suggests that the Kakapo has enhanced light sensitivity, poor visual acuity and a larger binocular field than other parrots. We conclude that the Kakapo possesses a visual system unlike that of either strictly nocturnal or diurnal birds and therefore does not adhere to the traditional view of the evolution of nocturnality in birds. PMID:21860663

Performance test and verification of an off-the-shelf automated avian radar tracking system.

PubMed

May, Roel; Steinheim, Yngve; Kvaløy, Pål; Vang, Roald; Hanssen, Frank

2017-08-01

Microwave radar is an important tool for observation of birds in flight and represents a tremendous increase in observation capability in terms of amount of surveillance space that can be covered at relatively low cost. Based on off-the-shelf radar hardware, automated radar tracking systems have been developed for monitoring avian movements. However, radar used as an observation instrument in biological research has its limitations that are important to be aware of when analyzing recorded radar data. This article describes a method for exploring the detection capabilities of a dedicated short-range avian radar system used inside the operational Smøla wind-power plant. The purpose of the testing described was to find the maximum detection range for various sized birds, while controlling for the effects of flight tortuosity, flight orientation relative to the radar and ground clutter. The method was to use a dedicated test target in form of a remotely controlled unmanned aerial vehicle (UAV) with calibrated radar cross section (RCS), which enabled the design of virtually any test flight pattern within the area of interest. The UAV had a detection probability of 0.5 within a range of 2,340 m from the radar. The detection performance obtained by the RCS-calibrated test target (-11 dBm 2 , 0.08 m 2 RCS) was then extrapolated to find the corresponding performance of differently sized birds. Detection range depends on system sensitivity, the environment within which the radar is placed and the spatial distribution of birds. The avian radar under study enables continuous monitoring of bird activity within a maximum range up to 2 km dependent on the size of the birds in question. While small bird species may be detected up to 0.5-1 km, larger species may be detected up to 1.5-2 km distance from the radar.

The Manú Gradient as a study system for bird pollination.

PubMed

Boehm, Mannfred Ma; Scholer, Micah N; Kennedy, Jeremiah Jc; Heavyside, Julian M; Daza, Aniceto; Guevara-Apaza, David; Jankowski, Jill E

2018-01-01

This study establishes an altiudinal gradient, spanning from the highland Andes (2400 m) to lowland Amazon, as a productive region for the study of bird pollination in Southeastern Peru. The 'Manú Gradient' has a rich history of ornithological research, the published data and resources from which lay the groundwork for analyses of plant-bird interactions. In this preliminary expedition we documented 44 plants exhibting aspects of the bird pollination syndrome, and made field observations of hummingbird visits at three sites spanning the Manú Gradient: 2800 m (Wayqecha), 1400 m (San Pedro), and 400 m (Pantiacolla). Some of the documented plant taxa are underrepresented in the bird pollination literature and could be promising avenues for future analyses of their pollination biology. The Manú Gradient is currently the focus of a concerted, international effort to describe and study the birds in the region; we propose that this region of Southeastern Peru is a productive and perhaps underestimated system to gain insight into the ecology and evolution of bird pollination. Observations were made on 11, 19, and 14 putatively bird pollinated plant species found at the high-, mid- and low-elevation sites along the gradient, respectively. Hummingbirds visited 18 of these plant species, with some plant species being visited by multiple hummingbird species or the same hummingbird species on differing occasions. Morphometric data is presented for putatively bird-pollinated plants, along with bill measurements from hummingbirds captured at each of three sites. Voucher specimens from this study are deposited in the herbaria of the Universidad Nacional de Agraria de La Molina (MOL), Peru and the University of British Columbia (UBC), Canada. The specimens collected represent a 'snapshot' of the diversity of bird-pollinated flora as observed over 10 day sampling windows (per site) during the breeding season for hummingbirds of Manú .

Hippocampal neurogenesis and volume in migrating and wintering semipalmated sandpipers (Calidris pusilla)

PubMed Central

de Morais Magalhães, Nara Gyzely; Guerreiro Diniz, Daniel; Pereira Henrique, Ediely; Corrêa Pereira, Patrick Douglas; Matos Moraes, Isis Ananda; Damasceno de Melo, Mauro André; Sherry, David Francis; Wanderley Picanço Diniz, Cristovam

2017-01-01

Long distance migratory birds find their way by sensing and integrating information from a large number of cues in their environment. These cues are essential to navigate over thousands of kilometers and reach the same breeding, stopover, and wintering sites every year. The semipalmated sandpiper (Calidris pusilla) is a long-distance migrant that breeds in the arctic tundra of Canada and Alaska and winters on the northeast coast of South America. Its fall migration includes a 5,300-kilometer nonstop flight over the Atlantic Ocean. The avian hippocampus has been proposed to play a central role in the integration of multisensory spatial information for navigation. Hippocampal neurogenesis may contribute to hippocampal function and a variety of factors including cognitive activity, exercise, enrichment, diet and stress influence neurogenesis in the hippocampus. We quantified hippocampal neurogenesis and volume in adult migrating and wintering semipalmated sandpipers using stereological counts of doublecortin (DCX) immunolabeled immature neurons. We found that birds captured in the coastal region of Bragança, Brazil during the wintering period had more DCX positive neurons and larger volume in the hippocampus than individuals captured in the Bay of Fundy, Canada during fall migration. We also estimate the number of NeuN immunolabeled cells in migrating and wintering birds and found no significant differences between them. These findings suggest that, at this time window, neurogenesis just replaced neurons that might be lost during the transatlantic flight. Our findings also show that in active fall migrating birds, a lower level of adult hippocampal neurogenesis is associated with a smaller hippocampal formation. High levels of adult hippocampal neurogenesis and a larger hippocampal formation found in wintering birds may be late occurring effects of long distance migratory flight or the result of conditions the birds experienced while wintering. PMID:28591201

Hippocampal neurogenesis and volume in migrating and wintering semipalmated sandpipers (Calidris pusilla).

PubMed

de Morais Magalhães, Nara Gyzely; Guerreiro Diniz, Cristovam; Guerreiro Diniz, Daniel; Pereira Henrique, Ediely; Corrêa Pereira, Patrick Douglas; Matos Moraes, Isis Ananda; Damasceno de Melo, Mauro André; Sherry, David Francis; Wanderley Picanço Diniz, Cristovam

2017-01-01

Long distance migratory birds find their way by sensing and integrating information from a large number of cues in their environment. These cues are essential to navigate over thousands of kilometers and reach the same breeding, stopover, and wintering sites every year. The semipalmated sandpiper (Calidris pusilla) is a long-distance migrant that breeds in the arctic tundra of Canada and Alaska and winters on the northeast coast of South America. Its fall migration includes a 5,300-kilometer nonstop flight over the Atlantic Ocean. The avian hippocampus has been proposed to play a central role in the integration of multisensory spatial information for navigation. Hippocampal neurogenesis may contribute to hippocampal function and a variety of factors including cognitive activity, exercise, enrichment, diet and stress influence neurogenesis in the hippocampus. We quantified hippocampal neurogenesis and volume in adult migrating and wintering semipalmated sandpipers using stereological counts of doublecortin (DCX) immunolabeled immature neurons. We found that birds captured in the coastal region of Bragança, Brazil during the wintering period had more DCX positive neurons and larger volume in the hippocampus than individuals captured in the Bay of Fundy, Canada during fall migration. We also estimate the number of NeuN immunolabeled cells in migrating and wintering birds and found no significant differences between them. These findings suggest that, at this time window, neurogenesis just replaced neurons that might be lost during the transatlantic flight. Our findings also show that in active fall migrating birds, a lower level of adult hippocampal neurogenesis is associated with a smaller hippocampal formation. High levels of adult hippocampal neurogenesis and a larger hippocampal formation found in wintering birds may be late occurring effects of long distance migratory flight or the result of conditions the birds experienced while wintering.

A comparative overview of the sperm centriolar complex in mammals and birds: Variations on a theme.

PubMed

Soley, John T

2016-06-01

This paper presents an overview of the structure, function and anomalies of the sperm centriolar complex (CC) on a comparative basis between mammals and birds. The information is based on selected references from the literature supplemented by original observations on spermiogenesis and sperm structure in disparate mammalian (cheetah and cane rat) and avian (ostrich, rhea and emu) species. Whereas the basic structure of the CC (a diplosome surrounded by pericentriolar material) is similar in Aves and Mammalia, certain differences are apparent. Centriole reduction does not generally occur in birds, but when present as in oscines, involves the loss of the proximal centriole. In ratites, the distal centriole forms the core of the entire midpiece and incorporates the outer dense fibres in addition to initiating axoneme formation. The elements of the connecting piece are not segmented in birds and less complex in basic design than in mammals. The functions of the various components of the CC appear to be similar in birds and mammals. Despite obvious differences in sperm head shape, the centrosomal anomalies afflicting both vertebrate groups demonstrate structural uniformity across species and display a similar range of defects. Most abnormalities result from defective migration and alignment of the CC relative to the nucleus. The most severe manifestation is that of acephalic sperm, while angled tail attachment, abaxial and multiflagellate sperm reflect additional defective forms. The stump-tail defect is not observed in birds. A comparison of defective sperm formation and centrosomal dysfunction at the molecular level is currently difficult owing to the paucity of relevant information on avian sperm. Copyright © 2016 Elsevier B.V. All rights reserved.

Netting bias in tropical bird studies

USGS Publications Warehouse

Coates-Estrada, R.; Dowell, B.A.; Fallon, J.E.; Robbins, C.S.; Wilson, Marcia H.; Sader, Steven A.

1995-01-01

Mist netting is the method most commonly used for gathering quantitative information on birds in the American tropics. Point count surveys or other methods often are used in conjunction with netting to reduce some of the many biases associated with netting, specially the failure of stationary nets within 2 m of the ground to sample birds of the tall canopy. We compare totals by both methods. Even close to the ground there are biases related to time of day and mesh size that have not been addressed in tropical studies. Some researchers operate nets all day, others only in the morning or in the morning and evening. Since 1986 we have netted birds and conducted point count surveys at more than 130 sites representing a broad spectrum of habitats in Mexico, Belize, and Guatemala. Using data only from those days when we could operate nets continuously from about dawn to dusk, we compare capture rates throughout the day to show the bias per part-day operations for certain families and species of birds and for the ratio of neotropical migrants to resident birds. More than half of 5000+ birds captured were caught after noon. Trochilidae and parulinae were captured primarily in the morning, Dendrocolaptidae in the middle of the day. Tyrannidae were more active than most birds in early afternoon, and Turdinae had morning and evening peaks. At each site we use a combination of 30-mm and 36-mm nets. The 30-mm mesh consistently captured more seedeaters, gnatcatchers, and small warblers, whereas the 36-mm mesh was more effective for birds of thrush size and larger.

A Preliminary Investigation on Ticks (Acari: Ixodidae) Infesting Birds in Kızılırmak Delta, Turkey.

PubMed

Keskin, Adem; Erciyas-Yavuz, Kiraz

2016-01-01

Ticks are mandatory blood-feeding ectoparasites of mammals, birds, reptiles, and even amphibians. Turkey has a rich bird fauna and is located on the main migration route for many birds. However, information on ticks infesting birds is very limited. In the present study, we aimed to determine ticks infesting birds in Kızılırmak Delta, Turkey. In 2014 autumn bird migration season, a total of 7,452 birds belonging to 79 species, 52 genera, 35 families, and 14 orders were examined for tick infestation. In total, 287 (234 larvae, 47 nymphs, 6♀) ticks were collected from 54 passerine birds (prevalence = 0.72%) belonging to 12 species. Ticks were identified as Amblyomma sp., Dermacentor marginatus (Sulzer), Haemaphysalis concinna Koch, Haemaphysalis punctata Canestrini and Fanzago, Hyalomma sp., Ixodes frontalis (Panzer), and Ixodes ricinus (L). The most common tick species were I. frontalis (223 larvae, 23 nymphs, 6♀) followed by I. ricinus (3 larvae, 12 nymphs) and H. concinna (4 larvae, 6 nymphs). Based on our results, it can be said that Erithacus rubecula (L.) is the main host of immature I. frontalis, whereas Turdus merula L. is the most important carrier of immature stages of some ticks in Kızılırmak Delta, Turkey. To the best of our knowledge, most of the tick-host associations found in this study have never been documented in the literature. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Free range and deep litter poultry production systems: effect on performance, carcass yield and meat composition of cockerel chickens.

PubMed

Sogunle, Olajide Mark; Olaniyi, Olagoke Ayobami; Egbeyale, Lawrence Tokunbo; Akinola, Olufemi Sunday; Shittu, Taofeek A; Abiola, Samuel Soladoye; Ladokun, Abimbola O; Sobayo, Richard Abayomi

2013-01-01

This study was carried out on 150 cockerel chickens each of Harco Black and Novogen strains to determine their performance, carcass yield and meat composition on free range and deep litter production systems. The birds were brooded for 4 weeks and thereafter allotted to the different production systems for a period of 12 weeks. Each production system was allotted 150 chicks (75 chicks per strain) with three replicates of 25 chicks. The birds on deep litter production system were fed ad libitum while each bird on free range was fed 50 % of its daily feed requirement. On the 84 th day, a total of 36 birds were randomly selected for analysis of the carcass yield and meat composition. The data generated were subjected to a two-way analysis of variance in a 2 × 2 factorial experimental arrangement. Novogen strain consumed less feed (P < 0.05) on free range and had the best feed/gain (2.72). A higher (P < 0.05) shear force value (3.74 N) was obtained in the thigh muscle for birds on free range. The tibia proximal length and breadth, and tibia distal length and breadth were significantly (P < 0.05) affected by the production systems and strains. On free range, Harco black had more meat (85.69 g) than bone (18.07 g) in the breast while Novogen had the lowest meat/bone (2.38). Conclusively, Novogen strain should be raised on free range for a better performance in terms of feed/gain, but for higher meat composition, Harco black is a better strain.

Rough Set Soft Computing Cancer Classification and Network: One Stone, Two Birds

PubMed Central

Zhang, Yue

2010-01-01

Gene expression profiling provides tremendous information to help unravel the complexity of cancer. The selection of the most informative genes from huge noise for cancer classification has taken centre stage, along with predicting the function of such identified genes and the construction of direct gene regulatory networks at different system levels with a tuneable parameter. A new study by Wang and Gotoh described a novel Variable Precision Rough Sets-rooted robust soft computing method to successfully address these problems and has yielded some new insights. The significance of this progress and its perspectives will be discussed in this article. PMID:20706619

Interaction rules underlying group decisions in homing pigeons

PubMed Central

Pettit, Benjamin; Perna, Andrea; Biro, Dora; Sumpter, David J. T.

2013-01-01

Travelling in groups gives animals opportunities to share route information by following cues from each other's movement. The outcome of group navigation will depend on how individuals respond to each other within a flock, school, swarm or herd. Despite the abundance of modelling studies, only recently have researchers developed techniques to determine the interaction rules among real animals. Here, we use high-resolution GPS (global positioning system) tracking to study these interactions in pairs of pigeons flying home from a familiar site. Momentary changes in velocity indicate alignment with the neighbour's direction, as well as attraction or avoidance depending on distance. Responses were stronger when the neighbour was in front. From the flocking behaviour, we develop a model to predict features of group navigation. Specifically, we show that the interactions between pigeons stabilize a side-by-side configuration, promoting bidirectional information transfer and reducing the risk of separation. However, if one bird gets in front it will lead directional choices. Our model further predicts, and observations confirm, that a faster bird (as measured from solo flights) will fly slightly in front and thus dominate the choice of homing route. Our results explain how group decisions emerge from individual differences in homing flight behaviour. PMID:24068173

Using texture analysis to improve per-pixel classification of very high resolution images for mapping plastic greenhouses

NASA Astrophysics Data System (ADS)

Agüera, Francisco; Aguilar, Fernando J.; Aguilar, Manuel A.

The area occupied by plastic-covered greenhouses has undergone rapid growth in recent years, currently exceeding 500,000 ha worldwide. Due to the vast amount of input (water, fertilisers, fuel, etc.) required, and output of different agricultural wastes (vegetable, plastic, chemical, etc.), the environmental impact of this type of production system can be serious if not accompanied by sound and sustainable territorial planning. For this, the new generation of satellites which provide very high resolution imagery, such as QuickBird and IKONOS can be useful. In this study, one QuickBird and one IKONOS satellite image have been used to cover the same area under similar circumstances. The aim of this work was an exhaustive comparison of QuickBird vs. IKONOS images in land-cover detection. In terms of plastic greenhouse mapping, comparative tests were designed and implemented, each with separate objectives. Firstly, the Maximum Likelihood Classification (MLC) was applied using five different approaches combining R, G, B, NIR, and panchromatic bands. The combinations of the bands used, significantly influenced some of the indexes used to classify quality in this work. Furthermore, the quality classification of the QuickBird image was higher in all cases than that of the IKONOS image. Secondly, texture features derived from the panchromatic images at different window sizes and with different grey levels were added as a fifth band to the R, G, B, NIR images to carry out the MLC. The inclusion of texture information in the classification did not improve the classification quality. For classifications with texture information, the best accuracies were found in both images for mean and angular second moment texture parameters. The optimum window size in these texture parameters was 3×3 for IK images, while for QB images it depended on the quality index studied, but the optimum window size was around 15×15. With regard to the grey level, the optimum was 128. Thus, the optimum texture parameter depended on the main objective of the image classification. If the main classification goal is to minimize the number of pixels wrongly classified, the mean texture parameter should be used, whereas if the main classification goal is to minimize the unclassified pixels the angular second moment texture parameter should be used. On the whole, both QuickBird and IKONOS images offered promising results in classifying plastic greenhouses.

Birds and flame retardants: A review of the toxic effects on birds of historical and novel flame retardants.

PubMed

Guigueno, Mélanie F; Fernie, Kim J

2017-04-01

Flame retardants (FRs) are a diverse group of chemicals, many of which persist in the environment and bioaccumulate in biota. Although some FRs have been withdrawn from manufacturing and commerce (e.g., legacy FRs), many continue to be detected in the environment; moreover, their replacements and/or other novel FRs are also detected in biota. Here, we review and summarize the literature on the toxic effects of various FRs on birds. Birds integrate chemical information (exposure, effects) across space and time, making them ideal sentinels of environmental contamination. Following an adverse outcome pathway (AOP) approach, we synthesized information on 8 of the most commonly reported endpoints in avian FR toxicity research: molecular measures, thyroid-related measures, steroids, retinol, brain anatomy, behaviour, growth and development, and reproduction. We then identified which of these endpoints appear more/most sensitive to FR exposure, as determined by the frequency of significant effects across avian studies. The avian thyroid system, largely characterized by inconsistent changes in circulating thyroid hormones that were the only measure in many such studies, appears to be moderately sensitive to FR exposure relative to the other endpoints; circulating thyroid hormones, after reproductive measures, being the most frequently examined endpoint. A more comprehensive examination with concurrent measurements of multiple thyroid endpoints (e.g., thyroid gland, deiodinase enzymes) is recommended for future studies to more fully understand potential avian thyroid toxicity of FRs. More research is required to determine the effects of various FRs on avian retinol concentrations, inconsistently sensitive across species, and to concurrently assess multiple steroid hormones. Behaviour related to courtship and reproduction was the most sensitive of all selected endpoints, with significant effects recorded in every study. Among domesticated species (Galliformes), raptors (Accipitriformes and Falconiformes), songbirds (Passeriformes), and other species of birds (e.g. gulls), raptors seem to be the most sensitive to FR exposure across these measurements. We recommend that future avian research connect biochemical disruptions and changes in the brain to ecologically relevant endpoints, such as behaviour and reproduction. Moreover, connecting in vivo endpoints with molecular endpoints for non-domesticated avian species is also highly important, and essential to linking FR exposure with reduced fitness and population-level effects. Crown Copyright © 2017. Published by Elsevier Inc. All rights reserved.

A Prototype Search Toolkit

NASA Astrophysics Data System (ADS)

Knepper, Margaret M.; Fox, Kevin L.; Frieder, Ophir

Information overload is now a reality. We no longer worry about obtaining a sufficient volume of data; we now are concerned with sifting and understanding the massive volumes of data available to us. To do so, we developed an integrated information processing toolkit that provides the user with a variety of ways to view their information. The views include keyword search results, a domain specific ranking system that allows for adaptively capturing topic vocabularies to customize and focus the search results, navigation pages for browsing, and a geospatial and temporal component to visualize results in time and space, and provide “what if” scenario playing. Integrating the information from different tools and sources gives the user additional information and another way to analyze the data. An example of the integration is illustrated on reports of the avian influenza (bird flu).

Airborne full tensor magnetic gradiometry surveys in the Thuringian basin, Germany

NASA Astrophysics Data System (ADS)

Queitsch, M.; Schiffler, M.; Goepel, A.; Stolz, R.; Meyer, M.; Meyer, H.; Kukowski, N.

2013-12-01

In this contribution we introduce a newly developed fully operational full tensor magnetic gradiometer (FTMG) instrument based on Superconducting Quantum Interference Devices (SQUIDs) and show example data acquired in 2012 within the framework of the INFLUINS (Integrated Fluid Dynamics in Sedimentary basins) project. This multidisciplinary project aims for a better understanding of movements and interaction between shallow and deep fluids in the Thuringian Basin in the center of Germany. In contrast to mapping total magnetic field intensity (TMI) in conventional airborne magnetic surveys for industrial exploration of mineral deposits and sedimentary basins, our instrument measures all components of the magnetic field gradient tensor using highly sensitive SQUID gradiometers. This significantly constrains the solutions of the inverse problem. Furthermore, information on the ratio between induced and remanent magnetization is obtained. Special care has been taken to reduce motion noise while acquiring data in airborne operation. Therefore, the sensors are mounted in a nonmagnetic and aerodynamically shaped bird made of fiberglas with a high drag tail which stabilizes the bird even at low velocities. The system is towed by a helicopter and kept at 30m above ground during data acquisition. Additionally, the system in the bird incorporates an inertial unit for geo-referencing and enhanced motion noise compensation, a radar altimeter for topographic correction and a GPS system for high precision positioning. Advanced data processing techniques using reference magnetometer and inertial unit data result in a very low system noise of less than 60 pT/m peak to peak in airborne operation. To show the performance of the system we present example results from survey areas within the Thuringian basin and along its bordering highlands. The mapped gradient tensor components show a high correlation to existing geologic maps. Furthermore, the measured gradient components indicate that some of the observed magnetic anomalies have a strong remanent magnetization. One example of interpretation of the acquired data of a magnetic anomaly related to a larger gabbro formation is presented.

Great cormorants ( Phalacrocorax carbo) can detect auditory cues while diving

NASA Astrophysics Data System (ADS)

Hansen, Kirstin Anderson; Maxwell, Alyssa; Siebert, Ursula; Larsen, Ole Næsbye; Wahlberg, Magnus

2017-06-01

In-air hearing in birds has been thoroughly investigated. Sound provides birds with auditory information for species and individual recognition from their complex vocalizations, as well as cues while foraging and for avoiding predators. Some 10% of existing species of birds obtain their food under the water surface. Whether some of these birds make use of acoustic cues while underwater is unknown. An interesting species in this respect is the great cormorant ( Phalacrocorax carbo), being one of the most effective marine predators and relying on the aquatic environment for food year round. Here, its underwater hearing abilities were investigated using psychophysics, where the bird learned to detect the presence or absence of a tone while submerged. The greatest sensitivity was found at 2 kHz, with an underwater hearing threshold of 71 dB re 1 μPa rms. The great cormorant is better at hearing underwater than expected, and the hearing thresholds are comparable to seals and toothed whales in the frequency band 1-4 kHz. This opens up the possibility of cormorants and other aquatic birds having special adaptations for underwater hearing and making use of underwater acoustic cues from, e.g., conspecifics, their surroundings, as well as prey and predators.

Cicadas impact bird communication in a noisy tropical rainforest

PubMed Central

Hall, Robert; Ray, William; Beck, Angela; Zook, James

2015-01-01

Many animals communicate through acoustic signaling, and “acoustic space” may be viewed as a limited resource that organisms compete for. If acoustic signals overlap, the information in them is masked, so there should be selection toward strategies that reduce signal overlap. The extent to which animals are able to partition acoustic space in acoustically diverse habitats such as tropical forests is poorly known. Here, we demonstrate that a single cicada species plays a major role in the frequency and timing of acoustic communication in a neotropical wet forest bird community. Using an automated acoustic monitor, we found that cicadas vary the timing of their signals throughout the day and that the frequency range and timing of bird vocalizations closely track these signals. Birds significantly avoid temporal overlap with cicadas by reducing and often shutting down vocalizations at the onset of cicada signals that utilize the same frequency range. When birds do vocalize at the same time as cicadas, the vocalizations primarily occur at nonoverlapping frequencies with cicada signals. Our results greatly improve our understanding of the community dynamics of acoustic signaling and reveal how patterns in biotic noise shape the frequency and timing of bird vocalizations in tropical forests. PMID:26023277

New hosts for the mite Ornithonyssus bursa in Argentina.

PubMed

Santillán, M Á; Grande, J M; Liébana, M S; Martínez, P; Díaz, L A; Bragagnolo, L A; Solaro, C; Galmes, M A; Sarasola, J H

2015-12-01

The mite Ornithonyssus bursa (Berlese) (Mesostigmata: Macronyssidae) is considered a poultry pest causing important infestations in chickens and it is considered a potential vector of arbovirus. Despite being considered a common parasite in wild birds, there is scarce published information about its potential hosts and effects on them. Here we present new bird hosts for O. bursa, assess the presence of Alphavirus, Flavivirus and Bunyavirus in mites from three host species, and discuss its potential impact on wild bird populations. We found O. bursa infecting five raptor and six passerine wild bird species. For nine of these species, this is the first record of infection by O. bursa. Although all analysed mites were negative for the examined arboviruses, the small sample size of mites does not allow further conclusions at the present moment. Because of the general nature of this ectoparasite, its presence in migratory long dispersal and endangered bird species, and the seropositivity for arboviruses in some of the species studied here, we consider it critical to assess the role of O. bursa and other ectoparasites as vectors and reservoirs of pathogens and as potential deleterious agents in wild bird populations. © 2015 The Royal Entomological Society.

Actogram analysis of free-flying migratory birds: new perspectives based on acceleration logging.

PubMed

Bäckman, Johan; Andersson, Arne; Pedersen, Lykke; Sjöberg, Sissel; Tøttrup, Anders P; Alerstam, Thomas

2017-07-01

The use of accelerometers has become an important part of biologging techniques for large-sized birds with accelerometer data providing information about flight mode, wing-beat pattern, behaviour and energy expenditure. Such data show that birds using much energy-saving soaring/gliding flight like frigatebirds and swifts can stay airborne without landing for several months. Successful accelerometer studies have recently been conducted also for free-flying small songbirds during their entire annual cycle. Here we review the principles and possibilities for accelerometer studies in bird migration. We use the first annual actograms (for red-backed shrike Lanius collurio) to explore new analyses and insights that become possible with accelerometer data. Actogram data allow precise estimates of numbers of flights, flight durations as well as departure/landing times during the annual cycle. Annual and diurnal rhythms of migratory flights, as well as prolonged nocturnal flights across desert barriers are illustrated. The shifting balance between flight, rest and different intensities of activity throughout the year as revealed by actogram data can be used to analyse exertion levels during different phases of the life cycle. Accelerometer recording of the annual activity patterns of individual birds will open up a new dimension in bird migration research.

Detection of West Nile virus in wild birds in Tana River and Garissa Counties, Kenya.

PubMed

Nyamwaya, Doris; Wang'ondu, Virginia; Amimo, Joshua; Michuki, George; Ogugo, Moses; Ontiri, Enoch; Sang, Rosemary; Lindahl, Johanna; Grace, Delia; Bett, Bernard

2016-11-23

West Nile fever virus is a zoonotic arboviral infection maintained in a sylvatic cycle involving mosquito vectors and birds. It is one the arboviruses whose geographical range is expanding because of climate and land use changes that enhance the densities of mosquitoes and promote mosquito-bird-human interactions. We carried out a survey to determine the reservoirs of WNV among wild birds in Tana River and Garissa counties, Kenya. Blood samples were obtained from 361 randomly trapped wild birds. Using real-time polymerase chain reaction (PCR), all samples were screened for WNV using gene specific primer sets amplifying a portion of the E region of the genome encoding the envelope protein. Sixty five (65) out of 361 birds screened tested positive for WNV on real-time PCR assay. Sequencing of the selected positive samples reveals that the isolated WNV were most closely related to strains isolated from China (2011). A regression analysis indicated that sampling location influenced the occurrence of WNV while species, age, weight and sex of the birds did not have any effect. This study provides baseline information on the existing circulation of WNV in this region among wild bird reservoirs that could spill over to the human population and points to the need for implementation of surveillance programs to map the distribution of the virus among reservoirs. Awareness creation about West Nile fever in this region is important to improve its detection and management.

The perfume of reproduction in birds: Chemosignalling in avian social life

PubMed Central

Caro, Samuel P.; Balthazart, Jacques; Bonadonna, Francesco

2014-01-01

Chemical cues were probably the first cues ever used to communicate and are still ubiquitous among living organisms. Birds have long been considered an exception: it was believed that birds were anosmic and relied on their acute visual and acoustic capabilities. Birds are however excellent smellers and use odors in various contexts including food searching, orientation, but also breeding. Successful reproduction in most vertebrates involves the exchange of complex social signals between partners. The first evidence for a role of olfaction in reproductive contexts in birds only dates back to the seventies, when ducks were shown to require a functional sense of smell to express normal sexual behaviors. Nowadays, even if the interest for olfaction in birds has largely increased, the role that bodily odors play in reproduction still remains largely understudied. The few available studies however suggest that olfaction is involved in many reproductive stages. Odors have been shown to influence the choice and synchronization of partners, the choice of nest-building material or the care for the eggs and offspring. How this chemical information is translated at the physiological level mostly remain to be described, although available evidence suggests that, as in mammals, key reproductive brain areas like the medial preoptic nucleus are activated by relevant olfactory signals. Olfaction in birds receives increasing attention and novel findings are continuously published, but many exciting discoveries are still ahead of us, and could make birds one of the animal classes with the largest panel of developed senses ever described. PMID:24928570

Illustrative visualization of 3D city models

NASA Astrophysics Data System (ADS)

Doellner, Juergen; Buchholz, Henrik; Nienhaus, Marc; Kirsch, Florian

2005-03-01

This paper presents an illustrative visualization technique that provides expressive representations of large-scale 3D city models, inspired by the tradition of artistic and cartographic visualizations typically found in bird"s-eye view and panoramic maps. We define a collection of city model components and a real-time multi-pass rendering algorithm that achieves comprehensible, abstract 3D city model depictions based on edge enhancement, color-based and shadow-based depth cues, and procedural facade texturing. Illustrative visualization provides an effective visual interface to urban spatial information and associated thematic information complementing visual interfaces based on the Virtual Reality paradigm, offering a huge potential for graphics design. Primary application areas include city and landscape planning, cartoon worlds in computer games, and tourist information systems.

Conduct and Results of YF-16 RPRV Stall/Spin Drop Model Tests

DTIC Science & Technology

1977-04-01

Bomb Recovery System Tests Iron Bird Recovery System Tests Captive Flights Typical Flight Operations Flight Planning and Pilot Training...helicopter tow qualification test, one model tow qualification test, three Iron Bird parachute recovery system verification tests, three captive tests...Corresponding Full-Scale YF-16 Altitude -Reference 1: Woodcock , Robert J., Some Notes on Free-Flight Model Seal- ing, AFFDL-TM-73-123-FCC, Air Force Flight

Peripheral Mechanisms for Vocal Production in Birds--Differences and Similarities to Human Speech and Singing

ERIC Educational Resources Information Center

Riede, Tobias; Goller, Franz

2010-01-01

Song production in songbirds is a model system for studying learned vocal behavior. As in humans, bird phonation involves three main motor systems (respiration, vocal organ and vocal tract). The avian respiratory mechanism uses pressure regulation in air sacs to ventilate a rigid lung. In songbirds sound is generated with two independently…

Fossil evidence of avian crops from the Early Cretaceous of China

PubMed Central

Zheng, Xiaoting; Martin, Larry D.; Zhou, Zhonghe; Burnham, David A.; Zhang, Fucheng; Miao, Desui

2011-01-01

The crop is characteristic of seed-eating birds today, yet little is known about its early history despite remarkable discoveries of many Mesozoic seed-eating birds in the past decade. Here we report the discovery of some early fossil evidence for the presence of a crop in birds. Two Early Cretaceous birds, the basal ornithurine Hongshanornis and a basal avian Sapeornis, demonstrate that an essentially modern avian digestive system formed early in avian evolution. The discovery of a crop in two phylogenetically remote lineages of Early Cretaceous birds and its absence in most intervening forms indicates that it was independently acquired as a specialized seed-eating adaptation. Finally, the reduction or loss of teeth in the forms showing seed-filled crops suggests that granivory was possibly one of the factors that resulted in the reduction of teeth in early birds. PMID:21896733

Avian Species Inventory at Manzanar National Historic Site, California - Final Report to the National Park Service

USGS Publications Warehouse

Hart, Jan; Drost, Charles

2008-01-01

We conducted a baseline inventory for avian species at Manzanar National Historic Site, Inyo County, Calif., from 2002 to 2005. Under the guidelines of the Mojave Network Biological Inventory Program, the primary objectives for this study were to (1) inventory and document the occurrence of avian species at Manzanar, with the goal of documenting at least 90 percent of the species present; (2) provide a geographic information system (GIS)-referenced list of sensitive species occurring at Manzanar that are rare, on Federal or State lists, or otherwise worthy of special consideration; and (3) enter all species data into the National Park Service NPSpecies database. Survey methods included general area searches, variable circular plot point-count censusing, nocturnal surveys, and nest searching. During 13 year-round survey sessions, we documented the occurrence of 132 bird species at Manzanar and confirmed breeding by 19 of these. Based on our findings, as well as review of the literature and searches for records of species occurrence, we estimate inventory completeness for regularly occurring bird species at Manzanar to be near 90 percent. No sensitive species on Federal or State lists were found. The distribution and relative abundance of common bird species at this site is now well enough known to begin development of a monitoring protocol for this group.

Express Testing Makes for More Effective Vet Visit

NASA Technical Reports Server (NTRS)

2003-01-01

This paper presents a discussion on Vetscan, a system designed to provide veterinarians with instant diagnostic information needed for rapid treatment decisions. VetScan is designed for point-of-care testing in any treatment setting, including mobile environments, where veterinarians can operate the analyzer from a car-lighter adapter. A full range of tests is available for almost every species normally treated by veterinarians, including cats, dogs, birds, reptiles, and large animals, such as those in the equine and bovine families.

U.S. Fish and Wildlife Service breeding bird surveys: How can they be used in forest management?

Treesearch

William F. Laudenslayer

1988-01-01

Since 1965, the U.S. Fish and Wildlife and Canadian Wildlife Services have sponsored annual Brceding Bird Surveys (BBSs), which are done in the United States and Canada using standard procedures. Data resulting from individual surveys may have Cptential to answer certain management questions or serve to fill information gaps for relatively small geographic areas. A BBS...

Recommended methods for monitoring change in bird populations by counting and capture of migrants

Treesearch

David J. T. Hussell; C. John Ralph

2005-01-01

Counts and banding captures of spring or fall migrants can generate useful information on the status and trends of the source populations. To do so, the counts and captures must be taken and recorded in a standardized and consistent manner. We present recommendations for field methods for counting and capturing migrants at intensively operated sites, such as bird...

Radar observation of known and unknown clear echoes

NASA Technical Reports Server (NTRS)

Glover, K. M.; Konrad, T. G.

1979-01-01

Target cross-section as a function of wavelength for known insects, known bird, and dot targets is presented. Tracking data using the time series analysis was tabulated for known birds. Examples were selected from these early works to give entomologists some indication of the types of information that are available by radar as well as examples of the different sources of clear-air radar backscatter.

Analysis of long-term forest bird monitoring data from national forests of the western Great Lakes Region

Treesearch

Gerald J. Niemi; Robert W. Howe; Brian R. Sturtevant; Linda R. Parker; Alexis R. Grinde; Nicholas P. Danz; Mark D. Nelson; Edmund J. Zlonis; Nicholas G. Walton; Erin E. Gnass Giese; Sue M. Lietz

2016-01-01

Breeding bird communities in forests of the western Great Lakes region are among the most diverse in North America, but the forest environment in this region has changed dramatically during the past 150 years. To address concerns about loss of biodiversity due to ongoing forest harvesting and to better inform forest planning, researchers have systematically monitored...

Avian influenza surveillance in wild birds in the European Union in 2006.

PubMed

Hesterberg, Uta; Harris, Kate; Stroud, David; Guberti, Vittorio; Busani, Luca; Pittman, Maria; Piazza, Valentina; Cook, Alasdair; Brown, Ian

2009-01-01

Infections of wild birds with highly pathogenic avian influenza (AI) subtype H5N1 virus were reported for the first time in the European Union in 2006. To capture epidemiological information on H5N1 HPAI in wild bird populations through large-scale surveillance and extensive data collection. Records were analysed at bird level to explore the epidemiology of AI with regard to species of wild birds involved, timing and location of infections as well as the applicability of different surveillance types for the detection of infections. In total, 120,706 records of birds were sent to the Community Reference Laboratory for analysis. Incidents of H5N1 HPAI in wild birds were detected in 14 EU Member States during 2006. All of these incidents occurred between February and May, with the exception of two single cases during the summer months in Germany and Spain. For the detection of H5N1 HPAI virus, passive surveillance of dead or diseased birds appeared the most effective approach, whilst active surveillance offered better detection of low pathogenic avian influenza (LPAI) viruses. No carrier species for H5N1 HPAI virus could be identified and almost all birds infected with H5N1 HPAI virus were either dead or showed clinical signs. A very large number of Mallards (Anas platyrhynchos) were tested in 2006 and while a high proportion of LPAI infections were found in this species, H5N1 HPAI virus was rarely identified in these birds. Orders of species that appeared to be very clinically susceptible to H5N1 HPAI virus were swans, diving ducks, mergansers and grebes, supporting experimental evidence. Surveillance results indicate that H5N1 HPAI virus did not establish itself successfully in the EU wild bird population in 2006.

Spare capacity and phenotypic flexibility in the digestive system of a migratory bird: defining the limits of animal design

PubMed Central

McWilliams, Scott R.; Karasov, William H.

2014-01-01

Flexible phenotypes enable animals to live in environments that change over space and time, and knowing the limits to and the required time scale for this flexibility provides insights into constraints on energy and nutrient intake, diet diversity and niche width. We quantified the level of immediate and ultimate spare capacity, and thus the extent of phenotypic flexibility, in the digestive system of a migratory bird in response to increased energy demand, and identified the digestive constraints responsible for the limits on sustained energy intake. Immediate spare capacity decreased from approximately 50% for birds acclimated to relatively benign temperatures to less than 20% as birds approached their maximum sustainable energy intake. Ultimate spare capacity enabled an increase in feeding rate of approximately 126% as measured in birds acclimated for weeks at −29°C compared with +21°C. Increased gut size and not tissue-specific differences in nutrient uptake or changes in digestive efficiency or retention time were primarily responsible for this increase in capacity with energy demand, and this change required more than 1–2 days. Thus, the pace of change in digestive organ size may often constrain energy intake and, for birds, retard the pace of their migration. PMID:24718764

Spare capacity and phenotypic flexibility in the digestive system of a migratory bird: defining the limits of animal design.

PubMed

McWilliams, Scott R; Karasov, William H

2014-05-22

Flexible phenotypes enable animals to live in environments that change over space and time, and knowing the limits to and the required time scale for this flexibility provides insights into constraints on energy and nutrient intake, diet diversity and niche width. We quantified the level of immediate and ultimate spare capacity, and thus the extent of phenotypic flexibility, in the digestive system of a migratory bird in response to increased energy demand, and identified the digestive constraints responsible for the limits on sustained energy intake. Immediate spare capacity decreased from approximately 50% for birds acclimated to relatively benign temperatures to less than 20% as birds approached their maximum sustainable energy intake. Ultimate spare capacity enabled an increase in feeding rate of approximately 126% as measured in birds acclimated for weeks at -29°C compared with +21°C. Increased gut size and not tissue-specific differences in nutrient uptake or changes in digestive efficiency or retention time were primarily responsible for this increase in capacity with energy demand, and this change required more than 1-2 days. Thus, the pace of change in digestive organ size may often constrain energy intake and, for birds, retard the pace of their migration.

Food, audience and sex effects on pinyon jay (Gymnorhinus cyanocephalus) communication.

PubMed

Dahlin, C R; Balda, R P; Slobodchikoff, C

2005-01-31

Pinyon jays (Gymnorhinus cyanocephalus) have a complex social system that may require a complex communication system. They need to interact with multiple flock members, and they form life-long pair-bonds. We researched whether pinyon jays would selectively vocalize depending on the presence or absence of food and certain flock members. We recorded the vocalizations of nine pinyon jays (four pair-bonds and one single male) in response to different audience types. The calls of the test bird were recorded after it was given either an empty food cup or one containing 50 pinyon pine (Pinus edulis) seeds, and the bird was in the presence of one of the following audience types: (1) two males and two females including subject's mate; (2) two males and two females excluding subject's mate; (3) four males excluding mate; (4) three females excluding mate; and (5) no audience. Birds gave fewer calls when there was food. When alone, birds called in a manner that may maximize long-distance transmission. Trends indicate that birds call differently to their mate. A sex effect was also found in that males and females called in a distinct manner, possibly reflecting differences in dominance status. Overall, birds responded to the presence or absence of an audience.

Biomimetic Flow Control

NASA Technical Reports Server (NTRS)

Anders, John B.

2000-01-01

Biologic flight has undoubtedly intrigued man for thousands of years, yet it has been only the last 100 years or so that any serious challenge has been mounted to the pre-eminence of birds. Although present-day large-scale aircraft are now clearly able to fly higher, faster and farther than any bird or insect, it is obvious that these biological creatures have a mastery of low Reynolds number, unsteady flows that is unrivaled by man-made systems. This paper suggests that biological flight should be examined for mechanisms that may apply to engineered flight systems, especially in the emerging field of small-scale, uninhabited aerial vehicles (UAV). This paper discusses the kinematics and aerodynamics of bird and insect flight, including some aspects of unsteady aerodynamics. The dynamics of flapping wing flight is briefly examined, including gait selection, flapping frequency and amplitude selection, as well as wing planform and angle-of-attack dynamics. Unsteady aerodynamic mechanisms as practiced by small birds and insects are reviewed. Drag reduction morphologies of birds and marine animals are discussed and fruitful areas of research are suggested.

Object-based habitat mapping using very high spatial resolution multispectral and hyperspectral imagery with LiDAR data

NASA Astrophysics Data System (ADS)

Onojeghuo, Alex Okiemute; Onojeghuo, Ajoke Ruth

2017-07-01

This study investigated the combined use of multispectral/hyperspectral imagery and LiDAR data for habitat mapping across parts of south Cumbria, North West England. The methodology adopted in this study integrated spectral information contained in pansharp QuickBird multispectral/AISA Eagle hyperspectral imagery and LiDAR-derived measures with object-based machine learning classifiers and ensemble analysis techniques. Using the LiDAR point cloud data, elevation models (such as the Digital Surface Model and Digital Terrain Model raster) and intensity features were extracted directly. The LiDAR-derived measures exploited in this study included Canopy Height Model, intensity and topographic information (i.e. mean, maximum and standard deviation). These three LiDAR measures were combined with spectral information contained in the pansharp QuickBird and Eagle MNF transformed imagery for image classification experiments. A fusion of pansharp QuickBird multispectral and Eagle MNF hyperspectral imagery with all LiDAR-derived measures generated the best classification accuracies, 89.8 and 92.6% respectively. These results were generated with the Support Vector Machine and Random Forest machine learning algorithms respectively. The ensemble analysis of all three learning machine classifiers for the pansharp QuickBird and Eagle MNF fused data outputs did not significantly increase the overall classification accuracy. Results of the study demonstrate the potential of combining either very high spatial resolution multispectral or hyperspectral imagery with LiDAR data for habitat mapping.

Potential environmental contaminant risks to avian species at important bird areas in the northeastern United States

USGS Publications Warehouse

Rattner, B.A.; Ackerson, B.K.

2008-01-01

Environmental contaminants can have profound effects on birds, acting from the molecular through population levels of biological organization. An analysis of potential contaminant threats was undertaken at 52 Important Bird Areas (IBAs) within the northeastern Atlantic coast drainage. Using geographic information system methodology, data layers describing or integrating contamination (impaired waters, fish or wildlife consumption advisories, toxic release inventory sites, and estimates of pesticide use) were overlaid on buffered IBA boundaries, and the relative threat at each site was ranked. The most threatened sites include Jefferson National Forest (NF), Stewart B. McKinney National Wildlife Refuge (NWR), Great Dismal Swamp NWR, Blue Ridge Parkway, Shenandoah National Park (NP), Adirondack Park, Edwin B. Forsythe NWR, George Washington NF, Green Mountain NF, Long Island Piping Plover Beaches, and Merrymeeting Bay. These sites exhibited moderate to high percentages of impaired waters and had fish consumption advisories related to mercury and polychlorinated biphenyls, and were located in counties with substantial pesticide use. Endangered, threatened and Watch List bird species are present at these sites. The Contaminant Exposure and Effects--Terrestrial Vertebrates database was searched within buffered IBA boundaries, and for a moderate number of sites there was concordance between the perceived risk and contaminant exposure. Several of the IBAs with apparently substantial contaminant threats had no avian ecotoxicological data (e.g., George Washington NF, Shenandoah NP). Based upon this screening level risk assessment, contaminant biomonitoring is warranted at such sites, and data generated from these efforts should foster natural resource management activities.

Automatic identification of bird targets with radar via patterns produced by wing flapping.

PubMed

Zaugg, Serge; Saporta, Gilbert; van Loon, Emiel; Schmaljohann, Heiko; Liechti, Felix

2008-09-06

Bird identification with radar is important for bird migration research, environmental impact assessments (e.g. wind farms), aircraft security and radar meteorology. In a study on bird migration, radar signals from birds, insects and ground clutter were recorded. Signals from birds show a typical pattern due to wing flapping. The data were labelled by experts into the four classes BIRD, INSECT, CLUTTER and UFO (unidentifiable signals). We present a classification algorithm aimed at automatic recognition of bird targets. Variables related to signal intensity and wing flapping pattern were extracted (via continuous wavelet transform). We used support vector classifiers to build predictive models. We estimated classification performance via cross validation on four datasets. When data from the same dataset were used for training and testing the classifier, the classification performance was extremely to moderately high. When data from one dataset were used for training and the three remaining datasets were used as test sets, the performance was lower but still extremely to moderately high. This shows that the method generalizes well across different locations or times. Our method provides a substantial gain of time when birds must be identified in large collections of radar signals and it represents the first substantial step in developing a real time bird identification radar system. We provide some guidelines and ideas for future research.

Conserved syntenic clusters of protein coding genes are missing in birds.

PubMed

Lovell, Peter V; Wirthlin, Morgan; Wilhelm, Larry; Minx, Patrick; Lazar, Nathan H; Carbone, Lucia; Warren, Wesley C; Mello, Claudio V

2014-01-01

Birds are one of the most highly successful and diverse groups of vertebrates, having evolved a number of distinct characteristics, including feathers and wings, a sturdy lightweight skeleton and unique respiratory and urinary/excretion systems. However, the genetic basis of these traits is poorly understood. Using comparative genomics based on extensive searches of 60 avian genomes, we have found that birds lack approximately 274 protein coding genes that are present in the genomes of most vertebrate lineages and are for the most part organized in conserved syntenic clusters in non-avian sauropsids and in humans. These genes are located in regions associated with chromosomal rearrangements, and are largely present in crocodiles, suggesting that their loss occurred subsequent to the split of dinosaurs/birds from crocodilians. Many of these genes are associated with lethality in rodents, human genetic disorders, or biological functions targeting various tissues. Functional enrichment analysis combined with orthogroup analysis and paralog searches revealed enrichments that were shared by non-avian species, present only in birds, or shared between all species. Together these results provide a clearer definition of the genetic background of extant birds, extend the findings of previous studies on missing avian genes, and provide clues about molecular events that shaped avian evolution. They also have implications for fields that largely benefit from avian studies, including development, immune system, oncogenesis, and brain function and cognition. With regards to the missing genes, birds can be considered ‘natural knockouts’ that may become invaluable model organisms for several human diseases.

Avian malaria in a boreal resident species: long-term temporal variability, and increased prevalence in birds with avian keratin disorder

USGS Publications Warehouse

Wilkinson, Laura C.; Handel, Colleen M.; Van Hemert, Caroline R.; Loiseau, Claire; Sehgal, Ravinder N. M.

2016-01-01

The prevalence of vector-borne parasitic diseases is widely influenced by biological and ecological factors. Environmental conditions such as temperature and precipitation can have a marked effect on haemosporidian parasites (Plasmodium spp.) that cause malaria and those that cause other malaria-like diseases in birds. However, there have been few long-term studies monitoring haemosporidian infections in birds in northern latitudes, where weather conditions can be highly variable and the effects of climate change are becoming more pronounced. We used molecular methods to screen more than 2,000 blood samples collected from black-capped chickadees (Poecile atricapillus), a resident passerine bird. Samples were collected over a 10 year period, mostly during the non-breeding season, at seven sites in Alaska, USA. We tested for associations between Plasmodium prevalence and local environmental conditions including temperature, precipitation, site, year and season. We also evaluated the relationship between parasite prevalence and individual host factors of age, sex and presence or absence of avian keratin disorder. This disease, which causes accelerated keratin growth in the beak, provided a natural study system in which to test the interaction between disease state and malaria prevalence. Prevalence of Plasmodium infection varied by year, site, age and individual disease status but there was no support for an effect of sex or seasonal period. Significantly, birds with avian keratin disorder were 2.6 times more likely to be infected by Plasmodium than birds without the disorder. Interannual variation in the prevalence of Plasmodium infection at different sites was positively correlated with summer temperatures at the local but not statewide scale. Sequence analysis of the parasite cytochrome b gene revealed a single Plasmodiumspp. lineage, P43. Our results demonstrate associations between prevalence of avian malaria and a variety of biological and ecological factors. These results also provide important baseline data that will be informative for predicting future changes inPlasmodium prevalence in the subarctic.

Nocturnal migratory songbirds adjust their travelling direction aloft: evidence from a radiotelemetry and radar study.

PubMed

Sjöberg, Sissel; Nilsson, Cecilia

2015-06-01

In order to fully understand the orientation behaviour of migrating birds, it is important to understand when birds set their travel direction. Departure directions of migratory passerines leaving stopover sites are often assumed to reflect the birds' intended travel directions, but this assumption has not been critically tested. We used data from an automated radiotelemetry system and a tracking radar at Falsterbo peninsula, Sweden, to compare the initial orientation of departing songbirds (recorded by radiotelemetry) with the orientation of songbird migrants in climbing and level flight (recorded by radar). We found that the track directions of birds at high altitudes and in level flight were more concentrated than the directions of departing birds and birds in climbing flight, which indicates that the birds adjust their travelling direction once aloft. This was further supported by a wide scatter of vanishing bearings in a subsample of radio-tracked birds that later passed an offshore radio receiver station 50 km southeast of Falsterbo. Track directions seemed to be more affected by winds in climbing compared with level flights, which may be explained by birds not starting to partially compensate for wind drift until they have reached cruising altitudes. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

An integrative approach to understanding bird origins.

PubMed

Xu, Xing; Zhou, Zhonghe; Dudley, Robert; Mackem, Susan; Chuong, Cheng-Ming; Erickson, Gregory M; Varricchio, David J

2014-12-12

Recent discoveries of spectacular dinosaur fossils overwhelmingly support the hypothesis that birds are descended from maniraptoran theropod dinosaurs, and furthermore, demonstrate that distinctive bird characteristics such as feathers, flight, endothermic physiology, unique strategies for reproduction and growth, and a novel pulmonary system originated among Mesozoic terrestrial dinosaurs. The transition from ground-living to flight-capable theropod dinosaurs now probably represents one of the best-documented major evolutionary transitions in life history. Recent studies in developmental biology and other disciplines provide additional insights into how bird characteristics originated and evolved. The iconic features of extant birds for the most part evolved in a gradual and stepwise fashion throughout archosaur evolution. However, new data also highlight occasional bursts of morphological novelty at certain stages particularly close to the origin of birds and an unavoidable complex, mosaic evolutionary distribution of major bird characteristics on the theropod tree. Research into bird origins provides a premier example of how paleontological and neontological data can interact to reveal the complexity of major innovations, to answer key evolutionary questions, and to lead to new research directions. A better understanding of bird origins requires multifaceted and integrative approaches, yet fossils necessarily provide the final test of any evolutionary model. Copyright © 2014, American Association for the Advancement of Science.

Multiple plumage traits convey information about age and within-age-class qualities of a canopy-dwelling songbird, the Cerulean Warbler

USGS Publications Warehouse

Boves, Than J.; Buehler, David A.; Wood, Petra Bohall; Rodewald, Amanda D.; Larkin, Jeffrey L.; Keyser, Patrick D.; Wigley, T. Ben

2014-01-01

Colorful plumage traits in birds may convey multiple, redundant, or unreliable messages about an individual. Plumage may reliably convey information about disparate qualities such as age, condition, and parental ability because discrete tracts of feathers may cause individuals to incur different intrinsic or extrinsic costs. Few studies have examined the information content of plumage in a species that inhabits forest canopies, a habitat with unique light environments and selective pressures. We investigated the information content of four plumage patches (blue-green crown and rump, tail white, and black breast band) in a canopy-dwelling species, the Cerulean Warbler (Setophaga cerulea), in relation to age, condition, provisioning, and reproduction. We found that older males displayed wider breast bands, greater tail white, and crown and rump feathers with greater blue-green (435–534 nm) chroma and hue than males in their first potential breeding season. In turn, older birds were in better condition (short and long term) and were reproductively superior to younger birds. We propose that these age-related plumage differences (i.e. delayed plumage maturation) were not a consequence of a life history strategy but instead resulted from constraints during early feather molts. Within age classes, we found evidence to support the multiple messages hypothesis. Birds with greater tail white molted tails in faster, those with more exaggerated rump plumage (lower hue, greater blue-green chroma) provisioned more, and those with lower rump blue-green chroma were in better condition. Despite evidence of reliable signaling in this species, we found no strong relationships between plumage and reproductive performance, potentially because factors other than individual differences more strongly influenced fecundity.

Two-dimensional thermal video analysis of offshore bird and bat flight

DOE PAGES

Matzner, Shari; Cullinan, Valerie I.; Duberstein, Corey A.

2015-09-11

Thermal infrared video can provide essential information about bird and bat presence and activity for risk assessment studies, but the analysis of recorded video can be time-consuming and may not extract all of the available information. Automated processing makes continuous monitoring over extended periods of time feasible, and maximizes the information provided by video. This is especially important for collecting data in remote locations that are difficult for human observers to access, such as proposed offshore wind turbine sites. We present guidelines for selecting an appropriate thermal camera based on environmental conditions and the physical characteristics of the target animals.more » We developed new video image processing algorithms that automate the extraction of bird and bat flight tracks from thermal video, and that characterize the extracted tracks to support animal identification and behavior inference. The algorithms use a video peak store process followed by background masking and perceptual grouping to extract flight tracks. The extracted tracks are automatically quantified in terms that could then be used to infer animal type and possibly behavior. The developed automated processing generates results that are reproducible and verifiable, and reduces the total amount of video data that must be retained and reviewed by human experts. Finally, we suggest models for interpreting thermal imaging information.« less

Two-dimensional thermal video analysis of offshore bird and bat flight

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matzner, Shari; Cullinan, Valerie I.; Duberstein, Corey A.

Thermal infrared video can provide essential information about bird and bat presence and activity for risk assessment studies, but the analysis of recorded video can be time-consuming and may not extract all of the available information. Automated processing makes continuous monitoring over extended periods of time feasible, and maximizes the information provided by video. This is especially important for collecting data in remote locations that are difficult for human observers to access, such as proposed offshore wind turbine sites. We present guidelines for selecting an appropriate thermal camera based on environmental conditions and the physical characteristics of the target animals.more » We developed new video image processing algorithms that automate the extraction of bird and bat flight tracks from thermal video, and that characterize the extracted tracks to support animal identification and behavior inference. The algorithms use a video peak store process followed by background masking and perceptual grouping to extract flight tracks. The extracted tracks are automatically quantified in terms that could then be used to infer animal type and possibly behavior. The developed automated processing generates results that are reproducible and verifiable, and reduces the total amount of video data that must be retained and reviewed by human experts. Finally, we suggest models for interpreting thermal imaging information.« less

[Comparative study of respiratory exchanging surfaces in birds and mammals].

PubMed

Jammes, Y

1975-01-01

Anatomical studies of the respiratory apparatus of birds show evidences for a gas exchanging tubular system (parabronchi and air capillaries); these exchanging structures are entirely dissociated from the ventilatory drive acting on the air sacs. A "cross-current" gas exchanging system (perpendicular disposition of air and blood capillaries) allow a good wash-out of carbon dioxide (PaCO2 lower than PECO2). The great efficiency of this lung is allowed by its very large diffusive surface (ASa) and by the high values of lung specific oxygen diffusing capacity (DO2/ASa) and of O2 extraction coefficient in inspired air. The ventilatory pattern of birds is characterized by a greater tidal volume and a smaller respiratory frequency than in mammals of same weight. Respiratory centers of birds receive afferences from lung stretch receptors, CO2-sensitive lung receptors and arterial chemoreceptors.

A visual pathway links brain structures active during magnetic compass orientation in migratory birds.

PubMed

Heyers, Dominik; Manns, Martina; Luksch, Harald; Güntürkün, Onur; Mouritsen, Henrik

2007-09-26

The magnetic compass of migratory birds has been suggested to be light-dependent. Retinal cryptochrome-expressing neurons and a forebrain region, "Cluster N", show high neuronal activity when night-migratory songbirds perform magnetic compass orientation. By combining neuronal tracing with behavioral experiments leading to sensory-driven gene expression of the neuronal activity marker ZENK during magnetic compass orientation, we demonstrate a functional neuronal connection between the retinal neurons and Cluster N via the visual thalamus. Thus, the two areas of the central nervous system being most active during magnetic compass orientation are part of an ascending visual processing stream, the thalamofugal pathway. Furthermore, Cluster N seems to be a specialized part of the visual wulst. These findings strongly support the hypothesis that migratory birds use their visual system to perceive the reference compass direction of the geomagnetic field and that migratory birds "see" the reference compass direction provided by the geomagnetic field.

The effect of crate height on the behavior of female turkeys during commercial pre-slaughter transportation.

PubMed

Di Martino, Guido; Capello, Katia; Stefani, Anna Lisa; Tripepi, Luca; Garbo, Angelica; Speri, Marina; Trolese, Matteo; Brichese, Michele; Marangon, Stefano; Bonfanti, Lebana

2017-10-01

Limited information is available on suitable height of transport crates for turkeys. We compared behaviors and physiological indicators of four groups of 10 female turkeys each confined in either conventional (38.5 cm height) or experimental (77 cm height) crates during six commercial pre-slaughter transportations for 86 km (76 ± 4 min) along two tracts with one-lane streets, crossroads, bends, roundabouts (S1 and S2) and a highway tract (H) between S1 and S2. Only 36% of birds in the higher crates maintained a standing position. In conventional versus experimental crates, the frequency of rising attempts was five/bird/hour versus less than one/bird/hour, while wing flapping was seven/bird/hour versus 20/bird/hour, and balance loss was one versus four/bird/hour. The behaviors of both groups differed significantly according to the route tract, with a lower frequency of stress-related behaviors at H. No scratches, fractures or hematomas were detected in any birds after transportation. Crate height had no significant effect on hemato-biochemical markers. These results suggest that crates enabling a standing position may increase potentially dangerous behaviors. Moreover, busy and curvy routes should be avoided, as they may contribute to increasing the frequency of stress-related behaviors. © 2017 Japanese Society of Animal Science.

Differential recovery of habitat use by birds after wind farm installation: A multi-year comparison

DOE Office of Scientific and Technical Information (OSTI.GOV)

Farfán, M.A., E-mail: mafarfanaguilar@hotmail.com; Departamento de Biología Animal, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, 29071, Málaga; Duarte, J., E-mail: jddofitecma@gmail.com

Onshore wind farms remain one of the most widely used technologies for the production of renewable energy. These are known to affect birds through disturbance or collision. Most research focus on the impact of wind farms on raptors or other large bird species, especially those of conservation concern. However, limited information exists on the effect of wind farms on small birds. Recovery of large versus small bird populations impacted by wind farms is also largely unstudied. A reason for this is the lack of long-term datasets based on standardized, systematic assessments. We monitored birds in the vicinity of a windmore » farm in an upland habitat in southern Spain (Malaga province), immediately after installation and 6.5 years post-construction. During both study periods, we observed 11 raptor and 38 non-raptor species (including 30 passerines). We found differences in recovery rates between raptors and non-raptors. Raptors showed an upturn in numbers but non-raptor abundance fell significantly. Greater attention should be paid to the recovery of wildlife after initial impact assessments than at present. This study confirms that regulatory authorities and developers should consider the likely impacts of wind farms on small bird populations. Mitigation measures focused particularly on non-raptor species should be considered and implemented as a means to reduce these negative effects.« less

A novel model for examining recovery of phonation after vocal nerve damage.

PubMed

Bhama, Prabhat K; Hillel, Allen D; Merati, Albert L; Perkel, David J

2011-05-01

Recurrent laryngeal nerve injury remains a dominant clinical issue in laryngology. To date, no animal model of laryngeal reinnervation has offered an outcome measure that can reflect the degree of recovery based on vocal function. We present an avian model system for studying recovery of learned vocalizations after nerve injury. Prospective animal study. Digital recordings of bird song were made from 11 adult male zebra finches; nine birds underwent bilateral crushing of the nerve supplying the vocal organ, and two birds underwent sham surgery. Songs from all the birds were then recorded regularly and analyzed based on temporal and spectral characteristics using computer software. Indices were calculated to indicate the degree of similarity between preoperative and postoperative song. Nerve crush caused audible differences in song quality and significant drops (P<0.05) in measured spectral and, to a lesser degree, temporal indices. Spectral indices recovered significantly (mean=43.0%; standard deviation [SD]=40.7; P<0.02), and there was an insignificant trend toward recovery of temporal index (mean=28.0%; SD=41.4; P=0.0771). In five of the nine (56%) birds, there was a greater than 50% recovery of spectral indices within a 4-week period. Two birds exhibited substantially less recovery of spectral indices and two birds had a persistent decline in spectral indices. Recovery of temporal index was highly variable as well, ranging from persistent further declines of 45.1% to recovery of 87%. Neither sham bird exhibited significant (P>0.05) differences in song after nerve crush. The songbird model system allows functional analysis of learned vocalization after surgical damage to vocal nerves. Copyright © 2011 The Voice Foundation. Published by Mosby, Inc. All rights reserved.

Long-term effects of chronic light pollution on seasonal functions of European blackbirds (Turdus merula).

PubMed

Dominoni, Davide M; Quetting, Michael; Partecke, Jesko

2013-01-01

Light pollution is known to affect important biological functions of wild animals, including daily and annual cycles. However, knowledge about long-term effects of chronic exposure to artificial light at night is still very limited. Here we present data on reproductive physiology, molt and locomotor activity during two-year cycles of European blackbirds (Turdus merula) exposed to either dark nights or 0.3 lux at night. As expected, control birds kept under dark nights exhibited two regular testicular and testosterone cycles during the two-year experiment. Control urban birds developed testes faster than their control rural conspecifics. Conversely, while in the first year blackbirds exposed to light at night showed a normal but earlier gonadal cycle compared to control birds, during the second year the reproductive system did not develop at all: both testicular size and testosterone concentration were at baseline levels in all birds. In addition, molt sequence in light-treated birds was more irregular than in control birds in both years. Analysis of locomotor activity showed that birds were still synchronized to the underlying light-dark cycle. We suggest that the lack of reproductive activity and irregular molt progression were possibly the results of i) birds being stuck in a photorefractory state and/or ii) chronic stress. Our data show that chronic low intensities of light at night can dramatically affect the reproductive system. Future studies are needed in order to investigate if and how urban animals avoid such negative impact and to elucidate the physiological mechanisms behind these profound long-term effects of artificial light at night. Finally we call for collaboration between scientists and policy makers to limit the impact of light pollution on animals and ecosystems.

How specialised is bird pollination in the Cactaceae?

PubMed

Gorostiague, P; Ortega-Baes, P

2016-01-01

Many cactus species produce 'bird' flowers; however, the reproductive biology of the majority of these species has not been studied. Here, we report on a study of the pollination of two species from the Cleistocactus genus, cited as an ornithophilous genus, in the context of the different ways in which they are specialised to bird pollination. In addition, we re-evaluate the level of specialisation of previous studies of cacti with bird pollination and evaluate how common phenotypic specialisation to birds is in this family. Both Cleistocactus species exhibited ornithophilous floral traits. Cleistocactus baumannii was pollinated by hummingbirds, whereas Cleistocactus smaragdiflorus was pollinated by hummingbirds and bees. Pollination by birds has been recorded in 27 cactus species, many of which exhibit ornithophilous traits; however, they show generalised pollination systems with bees, bats or moths in addition to birds being their floral visitors. Of all cactus species, 27% have reddish flowers. This trait is associated with diurnal anthesis and a tubular shape. Phenotypic specialisation to bird pollination is recognised in many cactus species; however, it is not predictive of functional and ecological specialisation in this family. © 2014 German Botanical Society and The Royal Botanical Society of the Netherlands.

Occurrence of velogenic viscerotropic Newcastle disease in pet and exotic birds in 1991.

PubMed

Panigrahy, B; Senne, D A; Pearson, J E; Mixson, M A; Cassidy, D R

1993-01-01

In 1991, velogenic viscerotropic Newcastle disease (VVND) was diagnosed in domestic psittacine birds in six states: Illinois, Indiana, Michigan, Texas, California, and Nevada. In the first four states, the disease assumed outbreak proportions. The affected psittacine birds--yellow-headed Amazon parrots (Amazona ochrocephala oratrix), yellow-naped Amazon parrots (Amazona ochrocephala auropalliata), cockatiels (Nymphicus hollandicus), and conures (unknown species)--exhibited respiratory and/or central nervous system signs. The velogenic viscerotropic Newcastle disease virus (VVNDV) was isolated from cloacal and tracheal swabs and various tissues, such as the lung, trachea, distal intestine, and spleen. The origin of the birds could not be established. The disease in the six states was promptly controlled, with no evidence that domestic poultry had been exposed. Also, VVNDV was isolated from quarantined birds intended for importation into the United States. Included were 53 moustached parakeets (Psittacula alexandri fasciata), a mynah (Gracula religiosa), a drongo (Dicrurus sp.), and three partridges (family Phasianidae). Groups of birds that yielded VVNDV were denied entry into the United States. Birds that are illegally imported and therefore not tested for the presence of foreign animal pathogens are a potential source of VVNDV and a threat to domestic poultry and caged birds.

Ethnomedicinal and cultural practices of mammals and birds in the vicinity of river Chenab, Punjab-Pakistan.

PubMed

Altaf, Muhammad; Javid, Arshad; Umair, Muhammad; Iqbal, Khalid Javed; Rasheed, Zahid; Abbasi, Arshad Mehmood

2017-07-12

Although, use of animal species in disease treatment and culture practices is as ancient as that of plant species; however ethnomedicinal uses and cultural values of animal species have rarely been reported. Present study is the first report on the medicinal uses of mammals and bird species in Pakistan. Questionnaires and semi-structured interviews were applied to collect qualitative and quantitative data from local informants (N = 109). Relative frequency of mention (RFM), fidelity level (FL), relative popularity level (RPL), similarity index (SI) and rank order priority (ROP) indices were used to analyzed the data. One hundred and eight species of animals, which include: 83% birds and 17% mammals were documented. In total 30 mammalian and 28 birds' species were used to treat various diseases such as rheumatic disorders, skin infections and sexual weakness among several others. Fats, flesh, blood, milk and eggs were the most commonly utilized body parts. Bos taurus, Bubalus bubalis, Capra aegagrus hircus, Felis domesticus, Lepus nigricollis dayanus and Ovis aries (mammals) and Anas platyrhynchos domesticus, Columba livia, Coturnix coturnix, Gallus gallus and Passer domesticus (birds) were the highly utilized species. Medicinal and cultural uses of 30% mammals and 46% birds were reported for the first time, whereas 33% mammals and 79% birds depicted zero similarity with previous reports. Present study exhibits significant ethnozoological knowledge of local inhabitants and their strong association with animal species, which could be helpful in sustainable use of biodiversity of the region. Additionally, in vitro and in vivo evaluation of biological activities in the mammalian and birds' species with maximum fidelity level and frequency of mention could be important to discover animal based novel drugs. Some commonly used mammals and birds species of the study area.

Power to detect trends in abundance of secretive marsh birds: effects of species traits and sampling effort

USGS Publications Warehouse

Steidl, Robert J.; Conway, Courtney J.; Litt, Andrea R.

2013-01-01

Standardized protocols for surveying secretive marsh birds have been implemented across North America, but the efficacy of surveys to detect population trends has not been evaluated. We used survey data collected from populations of marsh birds across North America and simulations to explore how characteristics of bird populations (proportion of survey stations occupied, abundance at occupied stations, and detection probability) and aspects of sampling effort (numbers of survey routes, stations/route, and surveys/station/year) affect statistical power to detect trends in abundance of marsh bird populations. In general, the proportion of survey stations along a route occupied by a species had a greater relative effect on power to detect trends than did the number of birds detected per survey at occupied stations. Uncertainty introduced by imperfect detection during surveys reduced power to detect trends considerably, but across the range of detection probabilities for most species of marsh birds, variation in detection probability had only a minor influence on power. For species that occupy a relatively high proportion of survey stations (0.20), have relatively high abundances at occupied stations (2.0 birds/station), and have high detection probability (0.50), ≥40 routes with 10 survey stations per route surveyed 3 times per year would provide an 80% chance of detecting a 3% annual decrease in abundance after 20 years of surveys. Under the same assumptions but for species that are less common, ≥100 routes would be needed to achieve the same power. Our results can help inform the design of programs to monitor trends in abundance of marsh bird populations, especially with regards to the amount of sampling effort necessary to meet programmatic goals.

Experience affects immediate early gene expression in response to conspecific call notes in black-capped chickadees (Poecile atricapillus).

PubMed

Hahn, Allison H; Guillette, Lauren M; Lee, Daniel; McMillan, Neil; Hoang, John; Sturdy, Christopher B

2015-01-01

Black-capped chickadees (Poecile atricapillus) produce numerous vocalizations, including the acoustically complex chick-a-dee call that is composed of A, B, C, and D notes. D notes are longer in duration and lower in frequency than the other note types and contain information regarding flock and species identification. Adult wild-caught black-capped chickadees have been shown to have similar amounts of immediate early gene (IEG) expression following playback of vocalizations with harmonic-like acoustic structure, similar to D notes. Here we examined how different environmental experiences affect IEG response to conspecific D notes. We hand-reared black-capped chickadees under three conditions: (1) with adult conspecifics, (2) with adult heterospecific mountain chickadees, and (3) without adults. We presented all hand-reared birds and a control group of field-reared black-capped chickadees, with conspecific D notes and quantified IEG expression in the caudomedial mesopallium (CMM) and caudomedial nidopallium (NCM). We found that field-reared birds that heard normal D notes had a similar neural response as a group of field-reared birds that heard playback of reversed D notes. Field-reared birds that heard normal D notes also had a similar neural response as birds reared with adult conspecifics. Birds reared without adults had a significantly reduced IEG response, whereas the IEG expression in birds reared with heterospecifics was at intermediate levels between birds reared with conspecifics and birds reared without adults. Although acoustic characteristics have been shown to drive IEG expression, our results demonstrate that experience with adults or normal adult vocalizations is also an important factor. Copyright © 2015 Elsevier B.V. All rights reserved.

Zebra finches have a light-dependent magnetic compass similar to migratory birds.

PubMed

Pinzon-Rodriguez, Atticus; Muheim, Rachel

2017-04-01

Birds have a light-dependent magnetic compass that provides information about the spatial alignment of the geomagnetic field. It is proposed to be located in the avian retina and mediated by a light-induced, radical-pair mechanism involving cryptochromes as sensory receptor molecules. To investigate how the behavioural responses of birds under different light spectra match with cryptochromes as the primary magnetoreceptor, we examined the spectral properties of the magnetic compass in zebra finches. We trained birds to relocate a food reward in a spatial orientation task using magnetic compass cues. The birds were well oriented along the trained magnetic compass axis when trained and tested under low-irradiance 521 nm green light. In the presence of a 1.4 MHz radio-frequency electromagnetic (RF)-field, the birds were disoriented, which supports the involvement of radical-pair reactions in the primary magnetoreception process. Birds trained and tested under 638 nm red light showed a weak tendency to orient ∼45 deg clockwise of the trained magnetic direction. Under low-irradiance 460 nm blue light, they tended to orient along the trained magnetic compass axis, but were disoriented under higher irradiance light. Zebra finches trained and tested under high-irradiance 430 nm indigo light were well oriented along the trained magnetic compass axis, but disoriented in the presence of a RF-field. We conclude that magnetic compass responses of zebra finches are similar to those observed in nocturnally migrating birds and agree with cryptochromes as the primary magnetoreceptor, suggesting that light-dependent, radical-pair-mediated magnetoreception is a common property for all birds, including non-migratory species. © 2017. Published by The Company of Biologists Ltd.

Peripheral mechanisms for vocal production in birds - differences and similarities to human speech and singing.

PubMed

Riede, Tobias; Goller, Franz

2010-10-01

Song production in songbirds is a model system for studying learned vocal behavior. As in humans, bird phonation involves three main motor systems (respiration, vocal organ and vocal tract). The avian respiratory mechanism uses pressure regulation in air sacs to ventilate a rigid lung. In songbirds sound is generated with two independently controlled sound sources, which reside in a uniquely avian vocal organ, the syrinx. However, the physical sound generation mechanism in the syrinx shows strong analogies to that in the human larynx, such that both can be characterized as myoelastic-aerodynamic sound sources. Similarities include active adduction and abduction, oscillating tissue masses which modulate flow rate through the organ and a layered structure of the oscillating tissue masses giving rise to complex viscoelastic properties. Differences in the functional morphology of the sound producing system between birds and humans require specific motor control patterns. The songbird vocal apparatus is adapted for high speed, suggesting that temporal patterns and fast modulation of sound features are important in acoustic communication. Rapid respiratory patterns determine the coarse temporal structure of song and maintain gas exchange even during very long songs. The respiratory system also contributes to the fine control of airflow. Muscular control of the vocal organ regulates airflow and acoustic features. The upper vocal tract of birds filters the sounds generated in the syrinx, and filter properties are actively adjusted. Nonlinear source-filter interactions may also play a role. The unique morphology and biomechanical system for sound production in birds presents an interesting model for exploring parallels in control mechanisms that give rise to highly convergent physical patterns of sound generation. More comparative work should provide a rich source for our understanding of the evolution of complex sound producing systems. Copyright © 2009 Elsevier Inc. All rights reserved.

Vocal coordination and vocal imitation: a role for mirror neurons?

PubMed

Newman, John D

2014-04-01

Some birds and mammals have vocal communication systems in which coordination between individuals is important. Examples would include duetting or antiphonal calling in some birds and mammals, rapid exchanges of the same vocalization, and vocal exchanges between paired individuals and other nearby pairs. Mirror neurons may play a role in such systems but become functional only after experience.

A new method for wireless video monitoring of bird nests

Treesearch

David I. King; Richard M. DeGraaf; Paul J. Champlin; Tracey B. Champlin

2001-01-01

Video monitoring of active bird nests is gaining popularity among researchers because it eliminates many of the biases associated with reliance on incidental observations of predation events or use of artificial nests, but the expense of video systems may be prohibitive. Also, the range and efficiency of current video monitoring systems may be limited by the need to...

Effect of type of defeathering system on Salmonella cross-contamination during commercial processing.

PubMed

Clouser, C S; Knabel, S J; Mast, M G; Doores, S

1995-04-01

The cross-contamination effects of three commercial defeathering systems were compared using turkeys from a single Salmonella-positive flock (< or = 15% cloacal-positive). Single or "common" flocks were used to control flock-to-flock variability. Thirty birds were mechanically defeathered in each system as the first flock of the day and compared with 30 hand-defeathered (control) birds. Three trials, each using a different common flock, were completed. In Trial 1, the incidence of Salmonella-positive birds decreased following mechanical defeathering at all three processors. The incidence of Salmonella-positive carcasses in test flocks increased following steam-spray (approximately 100%) and kosher (approximately 50%) defeathering in Trials 2 and 3, whereas no increase in Salmonella-positive carcasses resulted from conventional defeathering. The decrease in the number of Salmonella-positive birds as a result of defeathering observed in Trial 1, as compared to increases observed in Trials 2 and 3, may be related to the selection of feather-contaminated (Trial 1) vs intestinal-colonized (Trials 2 and 3) turkeys. Surface temperature of the carcasses and length of time required to defeather were monitored within each system. It is hypothesized that the increases in the number of Salmonella-positive birds following steam-spray and kosher defeathering in Trials 2 and 3 were a result of skin surface changes occurring during the defeathering process, which allowed increased adherence or entrapment of Salmonella spp. on or within remaining skin layers.

Experimental analysis of the auditory detection process on avian point counts

USGS Publications Warehouse

Simons, T.R.; Alldredge, M.W.; Pollock, K.H.; Wettroth, J.M.

2007-01-01

We have developed a system for simulating the conditions of avian surveys in which birds are identified by sound. The system uses a laptop computer to control a set of amplified MP3 players placed at known locations around a survey point. The system can realistically simulate a known population of songbirds under a range of factors that affect detection probabilities. The goals of our research are to describe the sources and range of variability affecting point-count estimates and to find applications of sampling theory and methodologies that produce practical improvements in the quality of bird-census data. Initial experiments in an open field showed that, on average, observers tend to undercount birds on unlimited-radius counts, though the proportion of birds counted by individual observers ranged from 81% to 132% of the actual total. In contrast to the unlimited-radius counts, when data were truncated at a 50-m radius around the point, observers overestimated the total population by 17% to 122%. Results also illustrate how detection distances decline and identification errors increase with increasing levels of ambient noise. Overall, the proportion of birds heard by observers decreased by 28 ± 4.7% under breezy conditions, 41 ± 5.2% with the presence of additional background birds, and 42 ± 3.4% with the addition of 10 dB of white noise. These findings illustrate some of the inherent difficulties in interpreting avian abundance estimates based on auditory detections, and why estimates that do not account for variations in detection probability will not withstand critical scrutiny.

Impact of nest sanitation on the immune system of parents and nestlings in a passerine bird.

PubMed

Evans, Jessica K; Griffith, Simon C; Klasing, Kirk C; Buchanan, Katherine L

2016-07-01

Bacterial communities are thought to have fundamental effects on the growth and development of nestling birds. The antigen exposure hypothesis suggests that, for both nestlings and adult birds, exposure to a diverse range of bacteria would select for stronger immune defences. However, there are relatively few studies that have tested the immune/bacterial relationships outside of domestic poultry. We therefore sought to examine indices of immunity (microbial killing ability in naive birds, which is a measure of innate immunity, and the antibody response to sheep red blood cells, which measures adaptive immunity) in both adult and nestling zebra finches (Taeniopygia guttata). We did this throughout breeding and between reproductive attempts in nests that were experimentally manipulated to change the intensity of bacterial exposure. Our results suggest that nest sanitation and bacterial load affected measures of the adaptive immune system, but not the innate immune parameters tested. Adult finches breeding in clean nests had a lower primary antibody response to sheep red blood cells, particularly males, and a greater difference between primary and secondary responses. Adult microbial killing of Escherichia coli decreased as parents moved from incubation to nestling rearing for both nest treatments; however, killing of Candida albicans remained consistent throughout. In nestlings, both innate microbial killing and the adaptive antibody response did not differ between nest environments. Together, these results suggest that exposure to microorganisms in the environment affects the adaptive immune system in nesting birds, with exposure upregulating the antibody response in adult birds. © 2016. Published by The Company of Biologists Ltd.

Measuring the impact of the pet trade on Indonesian birds.

PubMed

Harris, J Berton C; Tingley, Morgan W; Hua, Fangyuan; Yong, Ding Li; Adeney, J Marion; Lee, Tien Ming; Marthy, William; Prawiradilaga, Dewi M; Sekercioglu, Cagan H; Suyadi; Winarni, Nurul; Wilcove, David S

2016-03-31

The trade in wild animals involves one-third of the world's bird species and thousands of other vertebrate species. Although a few species are imperiled as a result of the wildlife trade, the lack of field studies makes it difficult to gauge how serious a threat it is to biodiversity. We used data on changes in bird abundances across space and time and information from trapper interviews to evaluate the effects of trapping wild birds for the pet trade in Sumatra, Indonesia. To analyze changes in bird abundance over time, we used data gathered over 14 years of repeated bird surveys in a 900-ha forest in southern Sumatra. In northern Sumatra, we surveyed birds along a gradient of trapping accessibility, from the edge of roads to 5 km into the forest interior. We interviewed 49 bird trappers in northern Sumatra to learn which species they targeted and how far they went into the forest to trap. We used prices from Sumatran bird markets as a proxy for demand and, therefore, trapping pressure. Market price was a significant predictor of species declines over time in southern Sumatra (e.g., given a market price increase of approximately $50, the log change in abundance per year decreased by 0.06 on average). This result indicates a link between the market-based pet trade and community-wide species declines. In northern Sumatra, price and change in abundance were not related to remoteness (distance from the nearest road). However, based on our field surveys, high-value species were rare or absent across this region. The median maximum distance trappers went into the forest each day was 5.0 km. This suggests that trapping has depleted bird populations across our remoteness gradient. We found that less than half of Sumatra's remaining forests are >5 km from a major road. Our results suggest that trapping for the pet trade threatens birds in Sumatra. Given the popularity of pet birds across Southeast Asia, additional studies are urgently needed to determine the extent and magnitude of the threat posed by the pet trade. © 2016 Society for Conservation Biology.

Hippocampal memory consolidation during sleep: a comparison of mammals and birds

PubMed Central

Rattenborg, Niels C.; Martinez-Gonzalez, Dolores; Roth, Timothy C.; Pravosudov, Vladimir V.

2010-01-01

The transition from wakefulness to sleep is marked by pronounced changes in brain activity. The brain rhythms that characterize the two main types of mammalian sleep, slow-wave sleep (SWS) and rapid eye movement (REM) sleep, are thought to be involved in the functions of sleep. In particular, recent theories suggest that the synchronous slow-oscillation of neocortical neuronal membrane potentials, the defining feature of SWS, is involved in processing information acquired during wakefulness. According to the Standard Model of memory consolidation, during wakefulness the hippocampus receives input from neocortical regions involved in the initial encoding of an experience and binds this information into a coherent memory trace that is then transferred to the neocortex during SWS where it is stored and integrated within preexisting memory traces. Evidence suggests that this process selectively involves direct connections from the hippocampus to the prefrontal cortex (PFC), a multimodal, high-order association region implicated in coordinating the storage and recall of remote memories in the neocortex. The slow-oscillation is thought to orchestrate the transfer of information from the hippocampus by temporally coupling hippocampal sharp-wave/ripples (SWRs) and thalamocortical spindles. SWRs are synchronous bursts of hippocampal activity, during which waking neuronal firing patterns are reactivated in the hippocampus and neocortex in a coordinated manner. Thalamocortical spindles are brief 7–14 Hz oscillations that may facilitate the encoding of information reactivated during SWRs. By temporally coupling the readout of information from the hippocampus with conditions conducive to encoding in the neocortex, the slow-oscillation is thought to mediate the transfer of information from the hippocampus to the neocortex. Although several lines of evidence are consistent with this function for mammalian SWS, it is unclear whether SWS serves a similar function in birds, the only taxonomic group other than mammals to exhibit SWS and REM sleep. Based on our review of research on avian sleep, neuroanatomy, and memory, although involved in some forms of memory consolidation, avian sleep does not appear to be involved in transferring hippocampal memories to other brain regions. Despite exhibiting the slow-oscillation, SWRs and spindles have not been found in birds. Moreover, although birds independently evolved a brain region – the caudolateral nidopallium (NCL) – involved in performing high-order cognitive functions similar to those performed by the PFC, direct connections between the NCL and hippocampus have not been found in birds, and evidence for the transfer of information from the hippocampus to the NCL or other extra-hippocampal regions is lacking. Although based on the absence of evidence for various traits, collectively, these findings suggest that unlike mammalian SWS, avian SWS may not be involved in transferring memories from the hippocampus. Furthermore, it suggests that the slow-oscillation, the defining feature of mammalian and avian SWS, may serve a more general function independent of that related to coordinating the transfer of information from the hippocampus to the PFC in mammals. Given that SWS is homeostatically regulated (a process intimately related to the slow-oscillation) in mammals and birds, functional hypotheses linked to this process may apply to both taxonomic groups. PMID:21070585

Hippocampal memory consolidation during sleep: a comparison of mammals and birds.

PubMed

Rattenborg, Niels C; Martinez-Gonzalez, Dolores; Roth, Timothy C; Pravosudov, Vladimir V

2011-08-01

The transition from wakefulness to sleep is marked by pronounced changes in brain activity. The brain rhythms that characterize the two main types of mammalian sleep, slow-wave sleep (SWS) and rapid eye movement (REM) sleep, are thought to be involved in the functions of sleep. In particular, recent theories suggest that the synchronous slow-oscillation of neocortical neuronal membrane potentials, the defining feature of SWS, is involved in processing information acquired during wakefulness. According to the Standard Model of memory consolidation, during wakefulness the hippocampus receives input from neocortical regions involved in the initial encoding of an experience and binds this information into a coherent memory trace that is then transferred to the neocortex during SWS where it is stored and integrated within preexisting memory traces. Evidence suggests that this process selectively involves direct connections from the hippocampus to the prefrontal cortex (PFC), a multimodal, high-order association region implicated in coordinating the storage and recall of remote memories in the neocortex. The slow-oscillation is thought to orchestrate the transfer of information from the hippocampus by temporally coupling hippocampal sharp-wave/ripples (SWRs) and thalamocortical spindles. SWRs are synchronous bursts of hippocampal activity, during which waking neuronal firing patterns are reactivated in the hippocampus and neocortex in a coordinated manner. Thalamocortical spindles are brief 7-14 Hz oscillations that may facilitate the encoding of information reactivated during SWRs. By temporally coupling the readout of information from the hippocampus with conditions conducive to encoding in the neocortex, the slow-oscillation is thought to mediate the transfer of information from the hippocampus to the neocortex. Although several lines of evidence are consistent with this function for mammalian SWS, it is unclear whether SWS serves a similar function in birds, the only taxonomic group other than mammals to exhibit SWS and REM sleep. Based on our review of research on avian sleep, neuroanatomy, and memory, although involved in some forms of memory consolidation, avian sleep does not appear to be involved in transferring hippocampal memories to other brain regions. Despite exhibiting the slow-oscillation, SWRs and spindles have not been found in birds. Moreover, although birds independently evolved a brain region--the caudolateral nidopallium (NCL)--involved in performing high-order cognitive functions similar to those performed by the PFC, direct connections between the NCL and hippocampus have not been found in birds, and evidence for the transfer of information from the hippocampus to the NCL or other extra-hippocampal regions is lacking. Although based on the absence of evidence for various traits, collectively, these findings suggest that unlike mammalian SWS, avian SWS may not be involved in transferring memories from the hippocampus. Furthermore, it suggests that the slow-oscillation, the defining feature of mammalian and avian SWS, may serve a more general function independent of that related to coordinating the transfer of information from the hippocampus to the PFC in mammals. Given that SWS is homeostatically regulated (a process intimately related to the slow-oscillation) in mammals and birds, functional hypotheses linked to this process may apply to both taxonomic groups. © 2010 The Authors. Biological Reviews © 2010 Cambridge Philosophical Society.

Bird radar validation in the field by time-referencing line-transect surveys.

PubMed

Dokter, Adriaan M; Baptist, Martin J; Ens, Bruno J; Krijgsveld, Karen L; van Loon, E Emiel

2013-01-01

Track-while-scan bird radars are widely used in ornithological studies, but often the precise detection capabilities of these systems are unknown. Quantification of radar performance is essential to avoid observational biases, which requires practical methods for validating a radar's detection capability in specific field settings. In this study a method to quantify the detection capability of a bird radar is presented, as well a demonstration of this method in a case study. By time-referencing line-transect surveys, visually identified birds were automatically linked to individual tracks using their transect crossing time. Detection probabilities were determined as the fraction of the total set of visual observations that could be linked to radar tracks. To avoid ambiguities in assigning radar tracks to visual observations, the observer's accuracy in determining a bird's transect crossing time was taken into account. The accuracy was determined by examining the effect of a time lag applied to the visual observations on the number of matches found with radar tracks. Effects of flight altitude, distance, surface substrate and species size on the detection probability by the radar were quantified in a marine intertidal study area. Detection probability varied strongly with all these factors, as well as species-specific flight behaviour. The effective detection range for single birds flying at low altitude for an X-band marine radar based system was estimated at ~1.5 km. Within this range the fraction of individual flying birds that were detected by the radar was 0.50 ± 0.06 with a detection bias towards higher flight altitudes, larger birds and high tide situations. Besides radar validation, which we consider essential when quantification of bird numbers is important, our method of linking radar tracks to ground-truthed field observations can facilitate species-specific studies using surveillance radars. The methodology may prove equally useful for optimising tracking algorithms.

Potential environmental contaminant risks to avian species at important bird areas in the northeastern United States

USGS Publications Warehouse

Rattner, B.A.; Ackerson, B.K.

2007-01-01

Environmental contaminants, acting at molecular through population levels of biological organization, can have profound effects upon birds. A screening level risk assessment was conducted that examined potential contaminant threats at 52 Important Bird Areas (IBAs) in the northeastern Atlantic coast drainage. Using geographic information system methodology, data layers describing or integrating pollutant hazards (impaired waters, fish or wildlife consumption advisories, toxic release inventory data, estimated pesticide use and hazard) were overlaid on buffered IBA boundaries, and the relative contaminant threat for each site was ranked. The 10 sites identified as having the greatest contaminant threats included Jefferson National Forest, Stewart B. McKinney National Wildlife Refuge, Great Dismal Swamp National Wildlife Refuge, Blue Ridge Parkway, Shenandoah National Park, Adirondack Park, Edwin B. Forsythe National Wildlife Refuge, George Washington National Forest, Green Mountain National Forest, and Long Island Piping Plover Beaches. These sites accounted for over 50% of the entire study area, and in general had moderate to high percentages of impaired waters, fish consumption advisories related to mercury and PCBs, and were located in counties with substantial application rates of pesticides known to be toxic to birds. Avian species at these IBAs include Federally endangered Roseate terns (Sterna dougallii), threatened piping plovers (Charadrius melodus), neotropical migrants, Bicknell?s thrush (Catharus bicknelli), Swainson?s warbler (Limnothlypis swainsonii) and wintering brant geese (Branta bernicla). Extant data for free-ranging birds from the Contaminant Exposure and Effects--Terrestrial Vertebrates database were examined within the buffered boundaries of each IBA, and for a moderate number of sites there was qualitative concordance between the perceived risk and actual contaminant exposure data. However, several of the IBAs with substantial contaminant hazards (e.g., Blue Ridge Parkway, George Washington National Forest, Shenandoah National Park) had no recent avian ecotoxicological data. Contaminant biomonitoring is warranted at such sites, and data generated from such efforts should foster natural resource management activities.

Predicting the impacts of bioenergy production on farmland birds.

PubMed

Rivas Casado, Monica; Mead, Andrew; Burgess, Paul J; Howard, David C; Butler, Simon J

2014-04-01

Meeting European renewable energy production targets is expected to cause significant changes in land use patterns. With an EU target of obtaining 20% of energy consumption from renewable sources by 2020, national and local policy makers need guidance on the impact of potential delivery strategies on ecosystem goods and services to ensure the targets are met in a sustainable manner. Within agroecosystems, models are available to explore consequences of such policy decisions for food, fuel and fibre production but few can describe the effect on biodiversity. This paper describes the integration and application of a farmland bird population model within a geographical information system (GIS) to explore the consequences of land use changes arising from different strategies to meet renewable energy production targets. Within a 16,000 ha arable dominated case study area in England, the population growth rates of 19 farmland bird species were predicted under baseline land cover, a scenario maximising wheat production for bioethanol, and a scenario focused on mix of bioenergy sources. Both scenarios delivered renewable energy production targets for the region (>12 kWh per person per day) but, despite differences in resultant landscape composition, the response of the farmland bird community as a whole to each scenario was small and broadly similar. However, this similarity in overall response masked significant intra- and inter-specific variations across the study area and between scenarios suggesting contrasting mechanisms of impact and highlighting the need for context dependent, species-level assessment of land use change impacts. This framework provides one of the first systematic attempts to spatially model the effect of policy driven land use change on the population dynamics of a suite of farmland birds. The GIS framework also facilitates its integration with other ecosystem service models to explore wider synergies and trade offs arising from national or local policy interventions. Copyright © 2013 Elsevier B.V. All rights reserved.

"Bird Song Metronomics": Isochronous Organization of Zebra Finch Song Rhythm.

PubMed

Norton, Philipp; Scharff, Constance

2016-01-01

The human capacity for speech and vocal music depends on vocal imitation. Songbirds, in contrast to non-human primates, share this vocal production learning with humans. The process through which birds and humans learn many of their vocalizations as well as the underlying neural system exhibit a number of striking parallels and have been widely researched. In contrast, rhythm, a key feature of language, and music, has received surprisingly little attention in songbirds. Investigating temporal periodicity in bird song has the potential to inform the relationship between neural mechanisms and behavioral output and can also provide insight into the biology and evolution of musicality. Here we present a method to analyze birdsong for an underlying rhythmic regularity. Using the intervals from one note onset to the next as input, we found for each bird an isochronous sequence of time stamps, a "signal-derived pulse," or pulse(S), of which a subset aligned with all note onsets of the bird's song. Fourier analysis corroborated these results. To determine whether this finding was just a byproduct of the duration of notes and intervals typical for zebra finches but not dependent on the individual duration of elements and the sequence in which they are sung, we compared natural songs to models of artificial songs. Note onsets of natural song deviated from the pulse(S) significantly less than those of artificial songs with randomized note and gap durations. Thus, male zebra finch song has the regularity required for a listener to extract a perceived pulse (pulse(P)), as yet untested. Strikingly, in our study, pulses(S) that best fit note onsets often also coincided with the transitions between sub-note elements within complex notes, corresponding to neuromuscular gestures. Gesture durations often equaled one or more pulse(S) periods. This suggests that gesture duration constitutes the basic element of the temporal hierarchy of zebra finch song rhythm, an interesting parallel to the hierarchically structured components of regular rhythms in human music.

“Bird Song Metronomics”: Isochronous Organization of Zebra Finch Song Rhythm

PubMed Central

Norton, Philipp; Scharff, Constance

2016-01-01

The human capacity for speech and vocal music depends on vocal imitation. Songbirds, in contrast to non-human primates, share this vocal production learning with humans. The process through which birds and humans learn many of their vocalizations as well as the underlying neural system exhibit a number of striking parallels and have been widely researched. In contrast, rhythm, a key feature of language, and music, has received surprisingly little attention in songbirds. Investigating temporal periodicity in bird song has the potential to inform the relationship between neural mechanisms and behavioral output and can also provide insight into the biology and evolution of musicality. Here we present a method to analyze birdsong for an underlying rhythmic regularity. Using the intervals from one note onset to the next as input, we found for each bird an isochronous sequence of time stamps, a “signal-derived pulse,” or pulseS, of which a subset aligned with all note onsets of the bird's song. Fourier analysis corroborated these results. To determine whether this finding was just a byproduct of the duration of notes and intervals typical for zebra finches but not dependent on the individual duration of elements and the sequence in which they are sung, we compared natural songs to models of artificial songs. Note onsets of natural song deviated from the pulseS significantly less than those of artificial songs with randomized note and gap durations. Thus, male zebra finch song has the regularity required for a listener to extract a perceived pulse (pulseP), as yet untested. Strikingly, in our study, pulsesS that best fit note onsets often also coincided with the transitions between sub-note elements within complex notes, corresponding to neuromuscular gestures. Gesture durations often equaled one or more pulseS periods. This suggests that gesture duration constitutes the basic element of the temporal hierarchy of zebra finch song rhythm, an interesting parallel to the hierarchically structured components of regular rhythms in human music. PMID:27458334

Forecasting the effects of land use scenarios on farmland birds reveal a potential mitigation of climate change impacts.

PubMed

Princé, Karine; Lorrillière, Romain; Barbet-Massin, Morgane; Léger, François; Jiguet, Frédéric

2015-01-01

Climate and land use changes are key drivers of current biodiversity trends, but interactions between these drivers are poorly modeled, even though they could amplify or mitigate negative impacts of climate change. Here, we attempt to predict the impacts of different agricultural change scenarios on common breeding birds within farmland included in the potential future climatic suitable areas for these species. We used the Special Report on Emissions Scenarios (SRES) to integrate likely changes in species climatic suitability, based on species distribution models, and changes in area of farmland, based on the IMAGE model, inside future climatic suitable areas. We also developed six farmland cover scenarios, based on expert opinion, which cover a wide spectrum of potential changes in livestock farming and cropping patterns by 2050. We ran generalized linear mixed models to calibrate the effects of farmland cover and climate change on bird specific abundance within 386 small agricultural regions. We used model outputs to predict potential changes in bird populations on the basis of predicted changes in regional farmland cover, in area of farmland and in species climatic suitability. We then examined the species sensitivity according to their habitat requirements. A scenario based on extensification of agricultural systems (i.e., low-intensity agriculture) showed the greatest potential to reduce reverse current declines in breeding birds. To meet ecological requirements of a larger number of species, agricultural policies accounting for regional disparities and landscape structure appear more efficient than global policies uniformly implemented at national scale. Interestingly, we also found evidence that farmland cover changes can mitigate the negative effect of climate change. Here, we confirm that there is a potential for countering negative effects of climate change by adaptive management of landscape. We argue that such studies will help inform sustainable agricultural policies for the future.

C-fos induction in forebrain areas of two different visual pathways during consolidation of sexual imprinting in the zebra finch (Taeniopygia guttata).

PubMed

Sadananda, Monika; Bischof, Hans-Joachim

2006-10-16

Two forebrain areas in the hyperpallium apicale and in the lateral nidopallium of isolated male zebra finches are highly active (2-deoxyglucose technique) on exposure to females for the first time, that is first courtship. These areas also demonstrate enhanced neuronal plasticity when screened with c-fos immunocytochemistry. Both are areas involved in the processing of visual information conveyed by the two major visual pathways in birds, strengthening our hypothesis that courtship in the zebra finch is a visually guided behaviour. First courtship and chased birds show enhanced c-fos induction in the hyperpallial area, which could represent neuronal activity reflecting changes in the immediate environment. The enhanced expression of fos in first courtship birds in lateral nidopallial neurons indicates imminent long-lasting changes at the synaptic level that form the substrate for imprinting, a stable form of learning in birds.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hodos, W.

Collisions with wind turbines can be a problem for many species of birds. Of particular concern are collisions by eagles and other protected species. This research study used the laboratory methods of physiological optics, animal psychophysics, and retinal electrophysiology to analyze the causes of collisions and to evaluate visual deterrents based on the results of this analysis. Bird collisions with the seemingly slow-moving turbines seem paradoxical given the superb vision that most birds, especially raptors, possess. However, our optical analysis indicated that as the eye approaches the rotating blades, the retinal image of the blade (which is the information thatmore » is transmitted to the animal's brain) increases in velocity until it is moving so fast that the retina cannot keep up with it. At this point, the retinal image becomes a transparent blur that the bird probably interprets as a safe area to fly through, with disastrous consequences. This phenomenon is called"motion smear" or"motion blur."« less

Flight aerodynamics in enantiornithines: Information from a new Chinese Early Cretaceous bird.

PubMed

Liu, Di; Chiappe, Luis M; Serrano, Francisco; Habib, Michael; Zhang, Yuguang; Meng, Qinjing

2017-01-01

We describe an exquisitely preserved new avian fossil (BMNHC-PH-919) from the Lower Cretaceous Yixian Formation of eastern Inner Mongolia, China. Although morphologically similar to Cathayornithidae and other small-sized enantiornithines from China's Jehol Biota, many morphological features indicate that it represents a new species, here named Junornis houi. The new fossil displays most of its plumage including a pair of elongated, rachis-dominated tail feathers similarly present in a variety of other enantiornithines. BMNHC-PH-919 represents the first record of a Jehol enantiornithine from Inner Mongolia, thus extending the known distribution of these birds into the eastern portion of this region. Furthermore, its well-preserved skeleton and wing outline provide insight into the aerodynamic performance of enantiornithines, suggesting that these birds had evolved bounding flight-a flight mode common to passeriforms and other small living birds-as early as 125 million years ago.

Dataset of Passerine bird communities in a Mediterranean high mountain (Sierra Nevada, Spain).

PubMed

Pérez-Luque, Antonio Jesús; Barea-Azcón, José Miguel; Álvarez-Ruiz, Lola; Bonet-García, Francisco Javier; Zamora, Regino

2016-01-01

In this data paper, a dataset of passerine bird communities is described in Sierra Nevada, a Mediterranean high mountain located in southern Spain. The dataset includes occurrence data from bird surveys conducted in four representative ecosystem types of Sierra Nevada from 2008 to 2015. For each visit, bird species numbers as well as distance to the transect line were recorded. A total of 27847 occurrence records were compiled with accompanying measurements on distance to the transect and animal counts. All records are of species in the order Passeriformes. Records of 16 different families and 44 genera were collected. Some of the taxa in the dataset are included in the European Red List. This dataset belongs to the Sierra Nevada Global-Change Observatory (OBSNEV), a long-term research project designed to compile socio-ecological information on the major ecosystem types in order to identify the impacts of global change in this area.

Dataset of Passerine bird communities in a Mediterranean high mountain (Sierra Nevada, Spain)

PubMed Central

Pérez-Luque, Antonio Jesús; Barea-Azcón, José Miguel; Álvarez-Ruiz, Lola; Bonet-García, Francisco Javier; Zamora, Regino

2016-01-01

Abstract In this data paper, a dataset of passerine bird communities is described in Sierra Nevada, a Mediterranean high mountain located in southern Spain. The dataset includes occurrence data from bird surveys conducted in four representative ecosystem types of Sierra Nevada from 2008 to 2015. For each visit, bird species numbers as well as distance to the transect line were recorded. A total of 27847 occurrence records were compiled with accompanying measurements on distance to the transect and animal counts. All records are of species in the order Passeriformes. Records of 16 different families and 44 genera were collected. Some of the taxa in the dataset are included in the European Red List. This dataset belongs to the Sierra Nevada Global-Change Observatory (OBSNEV), a long-term research project designed to compile socio-ecological information on the major ecosystem types in order to identify the impacts of global change in this area. PMID:26865820

Classroom Ideas

ERIC Educational Resources Information Center

Spooner, William E.

1977-01-01

A Drinking Bird toy is used to stimulate scientific questioning and problem solving. Suggestions are given for using the bird to explore scientific concepts including evaporation, work, systems, density and dynamic equilibrium. 32 questions you can use to stimulate student investigations are listed. (AJ)

Current Status of Research on the Shorebirds, Marsh Birds, and Waders of the Peninsula of Baja California

Treesearch

Eric Mellink

2005-01-01

Regarding the information on its birds, the peninsula of Baja California has a luxury status, compared to other regions of México. In this sense, it is useful to compare it with its nearest states: Sonora and Sinaloa. While the peninsula measures 143,790 km², Sonora is 184,937 km². Sinaloa (58,092 km²), although much smaller, has a...

A Bird Strike Handbook for Base-Level Managers

DTIC Science & Technology

1984-09-01

Background Literature Review . . . . . . . . . . 7 Statistical History. . • . 7 . . . . • . . • Bird Behavior. ... . .. . . .. . . 9 Literature...compiled all relevant information through an extensive literature search, review of base-level documents, and personal interviews. The final product...34. .•" ’ft,, ft. . 𔃾 ft ’ft V. V. 11. Background Literature Review Chapter 4 of this thesis will be a handbook for use by the base-level managers. In essence

Prey consumption and energy transfer by marine birds in the Gulf of Alaska

USGS Publications Warehouse

Hunt, G.L.; Drew, G.S.; Jahncke, J.; Piatt, John F.

2005-01-01

We investigated prey consumption by marine birds and their contribution to cross-shelf fluxes in the northern Gulf of Alaska. We utilized data from the North Pacific Pelagic Seabird Database for modeling energy demand and prey consumption. We found that prey consumption by marine birds was much greater over the continental shelf than it was over the basin. Over the shelf, subsurface-foraging marine birds dominated food consumption, whereas over the basin, surface-foraging birds took the most prey biomass. Daily consumption by marine birds during the non-breeding season ("winter") from September through April was greater than daily consumption during the breeding season, between May and August. Over the shelf, shearwaters, murres and, in winter, sea ducks, were the most important consumers. Over the basin, northern fulmars, gulls and kittiwakes predominated in winter and storm-petrels dominated in May to August. Our results suggest that marine birds contribute little to cross-shelf fluxes of energy or matter, but they do remove energy from the marine system through consumption, respiration and migration. ?? 2005 Elsevier Ltd. All rights reserved.

A DNA microarray for identification of selected Korean birds based on mitochondrial cytochrome c oxidase I gene sequences.

PubMed

Chung, In-Hyuk; Yoo, Hye Sook; Eah, Jae-Yong; Yoon, Hyun-Kyu; Jung, Jin-Wook; Hwang, Seung Yong; Kim, Chang-Bae

2010-10-01

DNA barcoding with the gene encoding cytochrome c oxidase I (COI) in the mitochondrial genome has been proposed as a standard marker to identify and discover animal species. Some migratory wild birds are suspected of transmitting avian influenza and pose a threat to aircraft safety because of bird strikes. We have previously reported the COI gene sequences of 92 Korean bird species. In the present study, we developed a DNA microarray to identify 17 selected bird species on the basis of nucleotide diversity. We designed and synthesized 19 specific oligonucleotide probes; these probes were arrayed on a silylated glass slide. The length of the probes was 19-24 bps. The COI sequences amplified from the tissues of the selected birds were labeled with a fluorescent probe for microarray hybridization, and unique hybridization patterns were detected for each selected species. These patterns may be considered diagnostic patterns for species identification. This microarray system will provide a sensitive and a high-throughput method for identification of Korean birds.

Phylogeny and species traits predict bird detectability

USGS Publications Warehouse

Solymos, Peter; Matsuoka, Steven M.; Stralberg, Diana; Barker, Nicole K. S.; Bayne, Erin M.

2018-01-01

Avian acoustic communication has resulted from evolutionary pressures and ecological constraints. We therefore expect that auditory detectability in birds might be predictable by species traits and phylogenetic relatedness. We evaluated the relationship between phylogeny, species traits, and field‐based estimates of the two processes that determine species detectability (singing rate and detection distance) for 141 bird species breeding in boreal North America. We used phylogenetic mixed models and cross‐validation to compare the relative merits of using trait data only, phylogeny only, or the combination of both to predict detectability. We found a strong phylogenetic signal in both singing rates and detection distances; however the strength of phylogenetic effects was less than expected under Brownian motion evolution. The evolution of behavioural traits that determine singing rates was found to be more labile, leaving more room for species to evolve independently, whereas detection distance was mostly determined by anatomy (i.e. body size) and thus the laws of physics. Our findings can help in disentangling how complex ecological and evolutionary mechanisms have shaped different aspects of detectability in boreal birds. Such information can greatly inform single‐ and multi‐species models but more work is required to better understand how to best correct possible biases in phylogenetic diversity and other community metrics.