Effects of sediment supply on surface textures of gravel‐bed rivers

USGS Publications Warehouse

Buffington, John M.; Montgomery, David R.

1999-01-01

Using previously published data from flume studies, we test a new approach for quantifying the effects of sediment supply (i.e., bed material supply) on surface grain size of equilibrium gravel channels. Textural response to sediment supply is evaluated relative to a theoretical prediction of competent median grain size (D50′). We find that surface median grain size (D50) varies inversely with sediment supply rate and systematically approaches the competent value (D50′) at low equilibrium transport rates. Furthermore, equilibrium transport rate is a power function of the difference between applied and critical shear stresses and is therefore a power function of the difference between competent and observed median grain sizes (D50′ and D50). Consequently, we propose that the difference between predicted and observed median grain sizes can be used to determine sediment supply rate in equilibrium channels. Our analysis framework collapses data from different studies toward a single relationship between sediment supply rate and surface grain size. While the approach appears promising, we caution that it has been tested only on a limited set of laboratory data and a narrow range of channel conditions.

Numerical investigation of interfacial transport resistance due to water droplets in proton exchange membrane fuel cell air channels

NASA Astrophysics Data System (ADS)

Koz, Mustafa; Kandlikar, Satish G.

2013-12-01

Oxygen transport resistance at the air flow channel and gas diffusion layer (GDL) interface is needed in modelling the performance of a proton exchange membrane fuel cell (PEMFC). This resistance is expressed through the non-dimensional Sherwood number (Sh). The effect of the presence of a droplet on Sh is studied numerically in an isolated air flow channel using a commercially available package, COMSOL Multiphysics®. A droplet is represented as a solid obstruction placed on the GDL-channel interface and centred along the channel width. The effect of a single droplet is first studied for a range of superficial mean air velocities and droplet sizes. Secondly, the effect of droplet spacing on Sh is studied through simulations of two consecutive droplets. Lastly, multiple droplets in a row are studied as a more representative case of a PEMFC air flow channel. The results show that the droplets significantly increase Sh above the fully developed value in the wake region. This enhancement increases with the number of droplets, droplet size, and superficial mean air velocity. Moreover, the analogy between mass and heat transfer is investigated by comparing Sh to the equivalent Nusselt number.

Effect of open channel filter on particle emissions of modern diesel engine.

PubMed

Heikkilä, Juha; Rönkkö, Topi; Lähde, Tero; Lemmetty, Mikko; Arffman, Anssi; Virtanen, Annele; Keskinen, Jorma; Pirjola, Liisa; Rothe, Dieter

2009-10-01

Particle emissions of modern diesel engines are of a particular interest because of their negative health effects. The special interest is in nanosized solid particles. The effect of an open channel filter on particle emissions of a modern heavy-duty diesel engine (MAN D2066 LF31, model year 2006) was studied. Here, the authors show that the open channel filter made from metal screen efficiently reduced the number of the smallest particles and, notably, the number and mass concentration of soot particles. The filter used in this study reached 78% particle mass reduction over the European Steady Cycle. Considering the size-segregated number concentration reduction, the collection efficiency was over 95% for particles smaller than 10 nm. The diffusion is the dominant collection mechanism in small particle sizes, thus the collection efficiency decreased as particle size increased, attaining 50% at 100 nm. The overall particle number reduction was 66-99%, and for accumulation-mode particles the number concentration reduction was 62-69%, both depending on the engine load.

Inhibition of KV7 Channels Protects the Rat Heart against Myocardial Ischemia and Reperfusion Injury.

PubMed

Hedegaard, Elise R; Johnsen, Jacob; Povlsen, Jonas A; Jespersen, Nichlas R; Shanmuganathan, Jeffrey A; Laursen, Mia R; Kristiansen, Steen B; Simonsen, Ulf; Bøtker, Hans Erik

2016-04-01

The voltage-gated KV7 (KCNQ) potassium channels are activated by ischemia and involved in hypoxic vasodilatation. We investigated the effect of KV7 channel modulation on cardiac ischemia and reperfusion injury and its interaction with cardioprotection by ischemic preconditioning (IPC). Reverse-transcription polymerase chain reaction revealed expression of KV7.1, KV7.4, and KV7.5 in the left anterior descending rat coronary artery and all KV7 subtypes (KV7.1-KV7.5) in the left and right ventricles of the heart. Isolated hearts were subjected to no-flow global ischemia and reperfusion with and without IPC. Infarct size was quantified by 2,3,5-triphenyltetrazolium chloride staining. Two blockers of KV7 channels, XE991 [10,10-bis(4-pyridinylmethyl)-9(10H)-anthracenone] (10 µM) and linopirdine (10 µM), reduced infarct size and exerted additive infarct reduction to IPC. An opener of KV7 channels, flupirtine (10 µM) abolished infarct size reduction by IPC. Hemodynamics were measured using a catheter inserted in the left ventricle and postischemic left ventricular recovery improved in accordance with reduction of infarct size and deteriorated with increased infarct size. XE991 (10 µM) reduced coronary flow in the reperfusion phase and inhibited vasodilatation in isolated small branches of the left anterior descending coronary artery during both simulated ischemia and reoxygenation. KV7 channels are expressed in rat coronary arteries and myocardium. Inhibition of KV7 channels exerts cardioprotection and opening of KV7 channels abrogates cardioprotection by IPC. Although safety issues should be further addressed, our findings suggest a potential role for KV7 blockers in the treatment of ischemia-reperfusion injury. Copyright © 2016 by The American Society for Pharmacology and Experimental Therapeutics.

Effects of channel noise on firing coherence of small-world Hodgkin-Huxley neuronal networks

NASA Astrophysics Data System (ADS)

Sun, X. J.; Lei, J. Z.; Perc, M.; Lu, Q. S.; Lv, S. J.

2011-01-01

We investigate the effects of channel noise on firing coherence of Watts-Strogatz small-world networks consisting of biophysically realistic HH neurons having a fraction of blocked voltage-gated sodium and potassium ion channels embedded in their neuronal membranes. The intensity of channel noise is determined by the number of non-blocked ion channels, which depends on the fraction of working ion channels and the membrane patch size with the assumption of homogeneous ion channel density. We find that firing coherence of the neuronal network can be either enhanced or reduced depending on the source of channel noise. As shown in this paper, sodium channel noise reduces firing coherence of neuronal networks; in contrast, potassium channel noise enhances it. Furthermore, compared with potassium channel noise, sodium channel noise plays a dominant role in affecting firing coherence of the neuronal network. Moreover, we declare that the observed phenomena are independent of the rewiring probability.

Incorporating Born solvation energy into the three-dimensional Poisson-Nernst-Planck model to study ion selectivity in KcsA K+ channels

NASA Astrophysics Data System (ADS)

Liu, Xuejiao; Lu, Benzhuo

2017-12-01

Potassium channels are much more permeable to potassium than sodium ions, although potassium ions are larger and both carry the same positive charge. This puzzle cannot be solved based on the traditional Poisson-Nernst-Planck (PNP) theory of electrodiffusion because the PNP model treats all ions as point charges, does not incorporate ion size information, and therefore cannot discriminate potassium from sodium ions. The PNP model can qualitatively capture some macroscopic properties of certain channel systems such as current-voltage characteristics, conductance rectification, and inverse membrane potential. However, the traditional PNP model is a continuum mean-field model and has no or underestimates the discrete ion effects, in particular the ion solvation or self-energy (which can be described by Born model). It is known that the dehydration effect (closely related to ion size) is crucial to selective permeation in potassium channels. Therefore, we incorporated Born solvation energy into the PNP model to account for ion hydration and dehydration effects when passing through inhomogeneous dielectric channel environments. A variational approach was adopted to derive a Born-energy-modified PNP (BPNP) model. The model was applied to study a cylindrical nanopore and a realistic KcsA channel, and three-dimensional finite element simulations were performed. The BPNP model can distinguish different ion species by ion radius and predict selectivity for K+ over Na+ in KcsA channels. Furthermore, ion current rectification in the KcsA channel was observed by both the PNP and BPNP models. The I -V curve of the BPNP model for the KcsA channel indicated an inward rectifier effect for K+ (rectification ratio of ˜3 /2 ) but indicated an outward rectifier effect for Na+ (rectification ratio of ˜1 /6 ) .

Effects of geometric configuration on droplet generation in Y-junctions and anti-Y-junctions microchannels

NASA Astrophysics Data System (ADS)

Liu, Zhao-Miao; Liu, Li-Kun; Shen, Feng

2015-10-01

Droplets generation in Y-junctions and anti-Y-junctions microchannels are experimentally studied using a high speed digital microscopic system and numerical simulation. Geometric configuration of a microchannel, such as Y-angle (90°, 135°, -90° and -135°), channel depth and other factors have been taken into consideration. It is found that droplets generated in anti-Y-junctions have a smaller size and a shorter generation cycle compared with those in Y-junctions under the same experimental conditions. Through observing the internal velocity field, the vortex appearing in continuous phase in anti-Y-junctions is one of the key factors for the difference of droplet size and generation cycle. It is found that droplet size is bigger and generation cycle is longer when the absolute angle value of the intersection between the continuous and the dispersed phases (i.e., the angle between the main channel and the continuous phase or the dispersed phase channel) increases. The droplet's size is influenced by the Y-angle, which varies with the channel depth in Y-junctions. The Y-angle has a positive effect on the droplet generation cycle, but a smaller height-width ratio will enhance the impact of a continuous and dispersed phase's intersection angle on the droplet generation cycle in Y-junctions microchannels.

Erythorbic acid promoted formation of CdS QDs in a tube-in-tube micro-channel reactor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liang, Yan; Tan, Jiawei; Wang, Jiexin

2014-12-15

Erythorbic acid assistant synthesis of CdS quantum dots (QDs) was conducted by homogeneous mixing of two continuous liquids in a high-throughput microporous tube-in-tube micro-channel reactor (MTMCR) at room temperature. The effects of the micropore size of the MTMCR, liquid flow rate, mixing time and reactant concentration on the size and size distribution of CdS QDs were investigated. It was found that the size and size distribution of CdS QDs could be tuned in the MTMCR. A combination of erythorbic acid promoted formation technique with the MTMCR may be a promising pathway for controllable mass production of QDs.

Practical implementation of channelized hotelling observers: effect of ROI size

NASA Astrophysics Data System (ADS)

Ferrero, Andrea; Favazza, Christopher P.; Yu, Lifeng; Leng, Shuai; McCollough, Cynthia H.

2017-03-01

Fundamental to the development and application of channelized Hotelling observer (CHO) models is the selection of the region of interest (ROI) to evaluate. For assessment of medical imaging systems, reducing the ROI size can be advantageous. Smaller ROIs enable a greater concentration of interrogable objects in a single phantom image, thereby providing more information from a set of images and reducing the overall image acquisition burden. Additionally, smaller ROIs may promote better assessment of clinical patient images as different patient anatomies present different ROI constraints. To this end, we investigated the minimum ROI size that does not compromise the performance of the CHO model. In this study, we evaluated both simulated images and phantom CT images to identify the minimum ROI size that resulted in an accurate figure of merit (FOM) of the CHO's performance. More specifically, the minimum ROI size was evaluated as a function of the following: number of channels, spatial frequency and number of rotations of the Gabor filters, size and contrast of the object, and magnitude of the image noise. Results demonstrate that a minimum ROI size exists below which the CHO's performance is grossly inaccurate. The minimum ROI size is shown to increase with number of channels and be dictated by truncation of lower frequency filters. We developed a model to estimate the minimum ROI size as a parameterized function of the number of orientations and spatial frequencies of the Gabor filters, providing a guide for investigators to appropriately select parameters for model observer studies.

Practical implementation of Channelized Hotelling Observers: Effect of ROI size.

PubMed

Ferrero, Andrea; Favazza, Christopher P; Yu, Lifeng; Leng, Shuai; McCollough, Cynthia H

2017-03-01

Fundamental to the development and application of channelized Hotelling observer (CHO) models is the selection of the region of interest (ROI) to evaluate. For assessment of medical imaging systems, reducing the ROI size can be advantageous. Smaller ROIs enable a greater concentration of interrogable objects in a single phantom image, thereby providing more information from a set of images and reducing the overall image acquisition burden. Additionally, smaller ROIs may promote better assessment of clinical patient images as different patient anatomies present different ROI constraints. To this end, we investigated the minimum ROI size that does not compromise the performance of the CHO model. In this study, we evaluated both simulated images and phantom CT images to identify the minimum ROI size that resulted in an accurate figure of merit (FOM) of the CHO's performance. More specifically, the minimum ROI size was evaluated as a function of the following: number of channels, spatial frequency and number of rotations of the Gabor filters, size and contrast of the object, and magnitude of the image noise. Results demonstrate that a minimum ROI size exists below which the CHO's performance is grossly inaccurate. The minimum ROI size is shown to increase with number of channels and be dictated by truncation of lower frequency filters. We developed a model to estimate the minimum ROI size as a parameterized function of the number of orientations and spatial frequencies of the Gabor filters, providing a guide for investigators to appropriately select parameters for model observer studies.

One-dimensional acoustic standing waves in rectangular channels for flow cytometry.

PubMed

Austin Suthanthiraraj, Pearlson P; Piyasena, Menake E; Woods, Travis A; Naivar, Mark A; Lόpez, Gabriel P; Graves, Steven W

2012-07-01

Flow cytometry has become a powerful analytical tool for applications ranging from blood diagnostics to high throughput screening of molecular assemblies on microsphere arrays. However, instrument size, expense, throughput, and consumable use limit its use in resource poor areas of the world, as a component in environmental monitoring, and for detection of very rare cell populations. For these reasons, new technologies to improve the size and cost-to-performance ratio of flow cytometry are required. One such technology is the use of acoustic standing waves that efficiently concentrate cells and particles to the center of flow channels for analysis. The simplest form of this method uses one-dimensional acoustic standing waves to focus particles in rectangular channels. We have developed one-dimensional acoustic focusing flow channels that can be fabricated in simple capillary devices or easily microfabricated using photolithography and deep reactive ion etching. Image and video analysis demonstrates that these channels precisely focus single flowing streams of particles and cells for traditional flow cytometry analysis. Additionally, use of standing waves with increasing harmonics and in parallel microfabricated channels is shown to effectively create many parallel focused streams. Furthermore, we present the fabrication of an inexpensive optical platform for flow cytometry in rectangular channels and use of the system to provide precise analysis. The simplicity and low-cost of the acoustic focusing devices developed here promise to be effective for flow cytometers that have reduced size, cost, and consumable use. Finally, the straightforward path to parallel flow streams using one-dimensional multinode acoustic focusing, indicates that simple acoustic focusing in rectangular channels may also have a prominent role in high-throughput flow cytometry. Copyright © 2012 Elsevier Inc. All rights reserved.

How Is Topographic Simplicity Maintained in Ephemeral, Dryland Channels?

NASA Astrophysics Data System (ADS)

Singer, M. B.; Michaelides, K.

2014-12-01

Topography in river channels reflects the time integral of streamflow-driven sediment flux mass balance. In dryland basins, infrequent and spatially heterogeneous rainfall generates a nonuniform sediment supply to ephemeral channels from hillslopes, and this sediment is subsequently sorted by spatially and temporally discontinuous channel flow. Paradoxically, the time integral of these interactions tends to produce simple topography, manifest in straight longitudinal profiles and symmetrical cross sections, which are distinct from bed morphology in perennial channels, but the controlling processes are unclear. We present a set of numerical modeling experiments based on field measurements and scenarios of uniform/nonuniform streamflow to investigate ephemeral channel bed-material flux and net sediment accumulation behavior in response to variations in channel hydrology, width, and grain size distribution. Coupled with variations in valley and channel width and frequent, yet discontinuous hillslope supply of coarse sediment, bed material becomes weakly sorted into coarse and fine sections that then affect rates of channel Qs. We identify three sediment transport thresholds relevant to poorly armored, dryland channels: 1) a low critical value required to entrain any grain sizes from the bed; 2) a value of ~4.5τ*c needed to move all grain sizes within a cross section with equal mobility; and 3) a value of ~50τ*c required to entrain gravel at nearly equivalent rates at all sections along a reach. The latter represents the 'geomorphically effective' event, which resets channel topography. We show that spatially variable flow below ~50τ*c creates and subsequently destroys incipient topography along ephemeral reaches and that large flood events above this threshold apparently dampen fluctuations in longitudinal sediment flux and thus smooth incipient channel bar forms. Both processes contribute to the maintenance of topographic simplicity in ephemeral dryland channels.

The Geomorphically Effective Hydrograph: An Emerging Concept For Interpreting Channel Morphology And Evolution

NASA Astrophysics Data System (ADS)

Grant, G.; Hempel, L. A.; Marwan, H.; Eaton, B. C.; Lewis, S.

2017-12-01

Predicting how alluvial channels adjust to changes in their flow and sediment regimes is one of the Holy Grails of geomorphology. Consider Lane's balance - one of the most widely recognized conceptual models in geomorphology - which graphically shows how a change in any one of the driving variables of slope, grain size, sediment transport rate, or discharge can be accommodated by changes in the other variables. Much of the history of process geomorphology addresses how channels respond to these controlling factors. Yet the emphasis has been disproportionately focused on the effects and consequences of changing sediment transport rates or grain size. Much less attention has been paid to how changing discharge itself, particularly over short, event-based timescales influences the channel. Discharge has typically been treated as a single value - often the bankfull discharge - with little attention paid to how the unsteady nature of flow during floods may influence the morphology of the channel. More attention has been paid recently to the effect of hydrograph shape on channel characteristics, notably the texture of the channel bed. There is little theory and scant data, however, that highlights how the hydrograph affects the channel. We have begun to address this problem through models and targeted experiments. Our goal is to explore the idea of the geomorphically effective hydrograph: the concept that hydrographs with different forms, durations, and sequences play a major, controlling role in shaping the form and organization of alluvial channels. We report on results from both field studies and flume experiments that lend support to this hypothesis. We compare channel forms in channels with radically different flow regimes. The distinctive rectangular shape, constant slope, and absence of alluvial bars in spring-fed channels are in sharp contrast to the more asymmetric channels with regular pool/riffle patterns observed in systems where discharge varies over orders of magnitude. Flume studies reveal how channel organization, defined as the tendency to form regularly-spaced pools, riffles, and bars, is related to the flashiness of the hydrograph. Drawing on these and other studies, we develop a conceptual model that accounts for hydrograph shape as an overarching control on channel development and evolution.

Direct and indirect effects of channel catfish (Ictalurus punctatus) on native crayfishes (Cambaridae) in experimental tanks

Treesearch

Susan B. Adams

2006-01-01

For The incised, sand-bed streams of northcentral Mississippi, USA, fish predation is one plausible mechanism to explain both relatively low crayfish densities and differences in stream size occupied by various native crayfishes. I conducted two mesocosm experiments to test effects of a fish predator (channel catfish, Ictalurus punctahls) on the...

Experimental research on the dam-break mechanisms of the Jiadanwan landslide dam triggered by the Wenchuan earthquake in China.

PubMed

Xu, Fu-gang; Yang, Xing-guo; Zhou, Jia-wen; Hao, Ming-hui

2013-01-01

Dam breaks of landslide dams are always accompanied by large numbers of casualties, a large loss of property, and negative influences on the downstream ecology and environment. This study uses the Jiadanwan landslide dam, created by the Wenchuan earthquake, as a case study example. Several laboratory experiments are carried out to analyse the dam-break mechanism of the landslide dam. The different factors that impact the dam-break process include upstream flow, the boulder effect, dam size, and channel discharge. The development of the discharge channel and the failure of the landslide dam are monitored by digital video and still cameras. Experimental results show that the upstream inflow and the dam size are the main factors that impact the dam-break process. An excavated discharge channel, especially a trapezoidal discharge channel, has a positive effect on reducing peak flow. The depth of the discharge channel also has a significant impact on the dam-break process. The experimental results are significant for landslide dam management and flood disaster prevention and mitigation.

Experimental Research on the Dam-Break Mechanisms of the Jiadanwan Landslide Dam Triggered by the Wenchuan Earthquake in China

PubMed Central

Xu, Fu-gang; Yang, Xing-guo; Hao, Ming-hui

2013-01-01

Dam breaks of landslide dams are always accompanied by large numbers of casualties, a large loss of property, and negative influences on the downstream ecology and environment. This study uses the Jiadanwan landslide dam, created by the Wenchuan earthquake, as a case study example. Several laboratory experiments are carried out to analyse the dam-break mechanism of the landslide dam. The different factors that impact the dam-break process include upstream flow, the boulder effect, dam size, and channel discharge. The development of the discharge channel and the failure of the landslide dam are monitored by digital video and still cameras. Experimental results show that the upstream inflow and the dam size are the main factors that impact the dam-break process. An excavated discharge channel, especially a trapezoidal discharge channel, has a positive effect on reducing peak flow. The depth of the discharge channel also has a significant impact on the dam-break process. The experimental results are significant for landslide dam management and flood disaster prevention and mitigation. PMID:23844387

Impact of the intermixed phase and the channel network on the carrier mobility of nanostructured solar cells

NASA Astrophysics Data System (ADS)

Woellner, Cristiano F.; Freire, José A.

2016-02-01

We analyzed the impact of the complex channel network of donor and acceptor domains in nanostructured solar cells on the mobility of the charge carriers moving by thermally activated hopping. Particular attention was given to the so called intermixed phase, or interface roughness, that has recently been shown to promote an increase in the cell efficiency. The domains were obtained from a Monte Carlo simulation of a two-species lattice gas. We generated domain morphologies with controllable channel size and interface roughness. The field and density dependence of the carrier hopping mobility in different morphologies was obtained by solving a master equation. Our results show that the mobility decreases with roughness and increases with typical channel sizes. The deleterious effect of the roughness on the mobility is quite dramatic at low carrier densities and high fields. The complex channel network is shown to be directly responsible for two potentially harmful effects to the cell performance: a remarkable decrease of the mobility with increasing field and the accumulation of charge at the domains interface, which leads to recombination losses.

Decay of grid turbulence in superfluid helium-4: Mesh dependence

NASA Astrophysics Data System (ADS)

Yang, J.; Ihas, G. G.

2018-03-01

Temporal decay of grid turbulence is experimentally studied in superfluid 4He in a large square channel. The second sound attenuation method is used to measure the turbulent vortex line density (L) with a phase locked tracking technique to minimize frequency shift effects induced by temperature fluctuations. Two different grids (0.8 mm and 3.0 mm mesh) are pulled to generate turbulence. Different power laws for decaying behavior are predicted by a theory. According to this theory, L should decay as t‑11/10 when the length scale of energy containing eddies grows from the grid mesh size to the size of the channel. At later time, after the energy containing eddy size becomes comparable to the channel, L should follow t‑3/2. Our recent experimental data exhibit evidence for t‑11/10 during the early time and t‑2 instead of t‑3/2 for later time. Moreover, a consistent bump/plateau feature is prominent between the two decay regimes for smaller (0.8 mm) grid mesh holes but absent with a grid mesh hole of 3.0 mm. This implies that in the large channel different types of turbulence are generated, depending on mesh hole size (mesh Reynolds number) compared to channel Reynolds number.

Scanning gate study of organic thin-film field-effect transistor

NASA Astrophysics Data System (ADS)

Aoki, N.; Sudou, K.; Matsusaki, K.; Okamoto, K.; Ochiai, Y.

2008-03-01

Scanning gate microscopy (SGM) has been applied for a study of organic thin-film field effect transistor (OFET). In contrast to one-dimensional nano-material such a carbon nanonube or nano-structure such a quantum point contact, visualization a transport characteristic of OFET channel is basically rather difficult since the channel width is much larger than the size of the SGM tip. Nevertheless, Schottky barriers are successfully visualized at the boundary between the metal electrodes and the OFET channel at ambient atmosphere.

Poisson-Nernst-Planck-Fermi theory for modeling biological ion channels

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Jinn-Liang, E-mail: jinnliu@mail.nhcue.edu.tw; Eisenberg, Bob, E-mail: beisenbe@rush.edu

2014-12-14

A Poisson-Nernst-Planck-Fermi (PNPF) theory is developed for studying ionic transport through biological ion channels. Our goal is to deal with the finite size of particle using a Fermi like distribution without calculating the forces between the particles, because they are both expensive and tricky to compute. We include the steric effect of ions and water molecules with nonuniform sizes and interstitial voids, the correlation effect of crowded ions with different valences, and the screening effect of water molecules in an inhomogeneous aqueous electrolyte. Including the finite volume of water and the voids between particles is an important new part ofmore » the theory presented here. Fermi like distributions of all particle species are derived from the volume exclusion of classical particles. Volume exclusion and the resulting saturation phenomena are especially important to describe the binding and permeation mechanisms of ions in a narrow channel pore. The Gibbs free energy of the Fermi distribution reduces to that of a Boltzmann distribution when these effects are not considered. The classical Gibbs entropy is extended to a new entropy form — called Gibbs-Fermi entropy — that describes mixing configurations of all finite size particles and voids in a thermodynamic system where microstates do not have equal probabilities. The PNPF model describes the dynamic flow of ions, water molecules, as well as voids with electric fields and protein charges. The model also provides a quantitative mean-field description of the charge/space competition mechanism of particles within the highly charged and crowded channel pore. The PNPF results are in good accord with experimental currents recorded in a 10{sup 8}-fold range of Ca{sup 2+} concentrations. The results illustrate the anomalous mole fraction effect, a signature of L-type calcium channels. Moreover, numerical results concerning water density, dielectric permittivity, void volume, and steric energy provide useful details to study a variety of physical mechanisms ranging from binding, to permeation, blocking, flexibility, and charge/space competition of the channel.« less

Effects of sediment supply on surface textures of gravel-bed rivers

Treesearch

John M. Buffington; David R. Montgomery

1999-01-01

Using previously published data from flume studies, we test a new approach for quantifying the effects of sediment supply (i.e., bed material supply) on surface grain size of equilibrium gravel channels. Textural response to sediment supply is evaluated relative to a theoretical prediction of competent median grain size (D’50). We find that surface median grain size (...

Effect of grading fingerling hybrid catfish (Channel Catfish X Blue Catfish) on growth, production, feed conversion, and foodfish size distribution.

USDA-ARS?s Scientific Manuscript database

Hybrid catfish production ponds often produce a wide size range of fish and payments to farmers may be reduced due to discounts for larger fish. This study was conducted to determine effect of grading hybrid catfish fingerlings on the size distribution of harvested foodfish. Three 0.25-acre ponds we...

Sediment loads and transport at constructed chutes along the Missouri River - Upper Hamburg Chute near Nebraska City, Nebraska, and Kansas Chute near Peru, Nebraska

USGS Publications Warehouse

Densmore, Brenda K.; Rus, David L.; Moser, Matthew T.; Hall, Brent M.; Andersen, Michael J.

2016-02-04

Comparisons of concentrations and loads from EWI samples collected from different transects within a study site resulted in few significant differences, but comparisons are limited by small sample sizes and large within-transect variability. When comparing the Missouri River upstream transect to the chute inlet transect, similar results were determined in 2012 as were determined in 2008—the chute inlet affected the amount of sediment entering the chute from the main channel. In addition, the Kansas chute is potentially affecting the sediment concentration within the Missouri River main channel, but small sample size and construction activities within the chute limit the ability to fully understand either the effect of the chute in 2012 or the effect of the chute on the main channel during a year without construction. Finally, some differences in SSC were detected between the Missouri River upstream transects and the chute downstream transects; however, the effect of the chutes on the Missouri River main-channel sediment transport was difficult to isolate because of construction activities and sampling variability.

Practical implementation of Channelized Hotelling Observers: Effect of ROI size

PubMed Central

Yu, Lifeng; Leng, Shuai; McCollough, Cynthia H.

2017-01-01

Fundamental to the development and application of channelized Hotelling observer (CHO) models is the selection of the region of interest (ROI) to evaluate. For assessment of medical imaging systems, reducing the ROI size can be advantageous. Smaller ROIs enable a greater concentration of interrogable objects in a single phantom image, thereby providing more information from a set of images and reducing the overall image acquisition burden. Additionally, smaller ROIs may promote better assessment of clinical patient images as different patient anatomies present different ROI constraints. To this end, we investigated the minimum ROI size that does not compromise the performance of the CHO model. In this study, we evaluated both simulated images and phantom CT images to identify the minimum ROI size that resulted in an accurate figure of merit (FOM) of the CHO’s performance. More specifically, the minimum ROI size was evaluated as a function of the following: number of channels, spatial frequency and number of rotations of the Gabor filters, size and contrast of the object, and magnitude of the image noise. Results demonstrate that a minimum ROI size exists below which the CHO’s performance is grossly inaccurate. The minimum ROI size is shown to increase with number of channels and be dictated by truncation of lower frequency filters. We developed a model to estimate the minimum ROI size as a parameterized function of the number of orientations and spatial frequencies of the Gabor filters, providing a guide for investigators to appropriately select parameters for model observer studies. PMID:28943699

Effect of stocking biomass on solids, phytoplankton communities, common off-flavors, and production parameters in a channel catfish biofloc technology production system

USDA-ARS?s Scientific Manuscript database

The effect of initial channel catfish (Ictalurus punctatus, Rafinesque, 1818) fingerling biomass (1.4, 1.8, or 2.3 kg m-3) on phytoplankton communities, common off-flavors, and stocker catfish production parameters was evaluated in biofloc technology production tanks. Stocker catfish size (145.5 – 1...

Nanowire size dependence on sensitivity of silicon nanowire field-effect transistor-based pH sensor

NASA Astrophysics Data System (ADS)

Lee, Ryoongbin; Kwon, Dae Woong; Kim, Sihyun; Kim, Sangwan; Mo, Hyun-Sun; Kim, Dae Hwan; Park, Byung-Gook

2017-12-01

In this study, we investigated the effects of nanowire size on the current sensitivity of silicon nanowire (SiNW) ion-sensitive field-effect transistors (ISFETs). The changes in on-current (I on) and resistance according to pH were measured in fabricated SiNW ISFETs of various lengths and widths. As a result, it was revealed that the sensitivity expressed as relative I on change improves as the width decreases. Through technology computer-aided design (TCAD) simulation analysis, the width dependence on the relative I on change can be explained by the observation that the target molecules located at the edge region along the channel width have a stronger effect on the sensitivity as the SiNW width is reduced. Additionally, the length dependence on the sensitivity can be understood in terms of the resistance ratio of the fixed parasitic resistance, including source/drain resistance, to the varying channel resistance as a function of channel length.

End region and current consolidation effects upon the performance of an MHD channel for the ETF conceptual design. [Engineering Test Facility

NASA Technical Reports Server (NTRS)

Wang, S. Y.; Smith, J. M.

1982-01-01

It is noted that operating conditions which yielded a peak thermodynamic efficiency (41%) for an EFT-size MHD/steam power plant were previously (Wang et al., 1981; Staiger, 1981) identified by considering only the active region (the primary portion for power production) of an MHD channel. These previous efforts are extended here to include an investigation of the effects of the channel end regions on overall power generation. Considering these effects, the peak plant thermodynamic efficiency is found to be slightly lowered (40.7%); the channel operating point for peak efficiency is shifted to the supersonic mode (Mach number of approximately 1.1) rather than the previous subsonic operation (Mach number of approximately 0.9). Also discussed is the sensitivity of the channel performance to the B-field, diffuser recovery coefficient, channel load parameter, Mach number, and combustor pressure.

Effects of Higher-Order Relativistic Nonlinearity and Wakefield During a Moderately Intense Laser Pulse Propagation in a Plasma Channel

NASA Astrophysics Data System (ADS)

Liu, Ming-Ping; Liu, Bing-Bing; Liu, San-Qiu; Zhang, Fu-Yang; Liu, Jie

2013-08-01

Using a variational approach, the propagation of a moderately intense laser pulse in a parabolic preformed plasma channel is investigated. The effects of higher-order relativistic nonlinearity (HRN) and wakefield are included. The effect of HRN serves as an additional defocusing mechanism and has the same order of magnitude in the spot size as that of the transverse wakefield (TWF). The effect of longitudinal wakefield is much larger than those of HRN and TWF for an intense laser pulse with the pulse length equaling the plasma wavelength. The catastrophic focusing of the laser spot size would be prevented in the present of HRN and then it varies with periodic focusing oscillations.

Water transport by the bacterial channel alpha-hemolysin

NASA Technical Reports Server (NTRS)

Paula, S.; Akeson, M.; Deamer, D.

1999-01-01

This study is an investigation of the ability of the bacterial channel alpha-hemolysin to facilitate water permeation across biological membranes. alpha-Hemolysin channels were incorporated into rabbit erythrocyte ghosts at varying concentrations, and water permeation was induced by mixing the ghosts with hypertonic sucrose solutions. The resulting volume decrease of the ghosts was followed by time-resolved optical absorption at pH 5, 6, and 7. The average single-channel permeability coefficient of alpha-hemolysin for water ranged between 1.3x10-12 cm/s and 1.5x10-12 cm/s, depending on pH. The slightly increased single-channel permeability coefficient at lower pH-values was attributed to an increase in the effective pore size. The activation energy of water transport through the channel was low (Ea=5.4 kcal/mol), suggesting that the properties of water inside the alpha-hemolysin channel resemble those of bulk water. This conclusion was supported by calculations based on macroscopic hydrodynamic laws of laminar water flow. Using the known three-dimensional structure of the channel, the calculations accurately predicted the rate of water flow through the channel. The latter finding also indicated that water permeation data can provide a good estimate of the pore size for large channels.

Micro-droplet formation via 3D printed micro channel

NASA Astrophysics Data System (ADS)

Jian, Zhen; Zhang, Jiaming; Li, Erqiang; Thoroddsen, Sigurdur T.

2016-11-01

Low cost, fast-designed and fast-fabricated 3D micro channel was used to create micro-droplets. Capillary with an outer diameter of 1.5 mm and an inner diameter of 150 μm was inserted into a 3D printed cylindrical channel with a diameter of 2 mm . Flow rate of the two inlets, insert depth, liquid (density, viscosity and surface tension) and solid (roughness, contact angle) properties all play a role in the droplet formation. Different regimes - dripping, jetting, unstable state - were observed in the micro-channel on varying these parameters. With certain parameter combinations, successive formation of micro-droplets with equal size was observed and its size can be much smaller than the smallest channel size. Based on our experimental results, the droplet formation via 3D printed micro T-junction was investigated through direct numerical simulations with a code called Gerris. Reynolds numbers Re = ρUL / μ and Weber numbers We = ρU2 L / σ of the two liquids were introduced to measure the liquid effect. The parameter regime where different physical dynamics occur was studied and the regime transition was observed with certain threshold values. Qualitative and quantitative analysis were performed as well between simulations and experiments.

The Graded Alluvial River: Variable Flow and the Dominant Discharge

NASA Astrophysics Data System (ADS)

Blom, A.; Arkesteijn, L.; Viparelli, E.

2016-12-01

We derive analytical formulations for the graded or equilibrium longitudinal profile of a mixed-sediment alluvial river under variable flow. The formulations are applicable to reaches upstream from the backwater zone. The model is based on the conservation equations for the mass of two distinct sediment modes, sand and gravel, at the bed surface to account for the effects of grain size selective transport and abrasion of gravel particles. The effects of a variable flow rate are included by (a) treating the flow as a continuously changing yet steady water discharge (i.e. here termed an alternating steady discharge) and (b) assuming the time scale of changes in channel slope and bed surface texture to be much larger than the one of changes in flow rate. The equations are simplified realizing that at equilibrium the river profile finds itself in a dynamic steady state with oscillations around constant mean values of channel slope and bed surface texture. A generalized sediment transport relation representing the stochastic nature of sediment transport allows for explicit or analytical solutions to the streamwise decrease of both the channel slope and the bed surface mean grain size under variable flow for reaches unaffected by backwater effects. This modelling approach also provides a definition of a channel-forming or dominant water discharge, i.e., that steady water discharge that is equivalent in its effect on the equilibrium channel slope to the full hydrograph.

Stress Effects in Channel Catfish (Ictalurus punctatus) Fry on Pond Survival

USDA-ARS?s Scientific Manuscript database

Results from previous studies suggested that channel catfish (Ictalurus punctatus) fry that were housed in very high traffic areas from hatch until reaching 9 g in size were able to survive experimental challenge with Edwardsiella ictaluri better than siblings who were hatched and raised in very low...

Manipulation of heat-diffusion channel in laser thermal lithography.

PubMed

Wei, Jingsong; Wang, Yang; Wu, Yiqun

2014-12-29

Laser thermal lithography is a good alternative method for forming small pattern feature size by taking advantage of the structural-change threshold effect of thermal lithography materials. In this work, the heat-diffusion channels of laser thermal lithography are first analyzed, and then we propose to manipulate the heat-diffusion channels by inserting thermal conduction layers in between channels. Heat-flow direction can be changed from the in-plane to the out-of-plane of the thermal lithography layer, which causes the size of the structural-change threshold region to become much smaller than the focused laser spot itself; thus, nanoscale marks can be obtained. Samples designated as "glass substrate/thermal conduction layer/thermal lithography layer (100 nm)/thermal conduction layer" are designed and prepared. Chalcogenide phase-change materials are used as thermal lithography layer, and Si is used as thermal conduction layer to manipulate heat-diffusion channels. Laser thermal lithography experiments are conducted on a home-made high-speed rotation direct laser writing setup with 488 nm laser wavelength and 0.90 numerical aperture of converging lens. The writing marks with 50-60 nm size are successfully obtained. The mark size is only about 1/13 of the focused laser spot, which is far smaller than that of the light diffraction limit spot of the direct laser writing setup. This work is useful for nanoscale fabrication and lithography by exploiting the far-field focusing light system.

Drainage basins, channels, and flow characteristics of selected streams in central Pennsylvania

USGS Publications Warehouse

Brush, Lucien M.

1961-01-01

The hydraulic, basin, and geologic characteristics of 16 selected streams in central Pennsylvania were measured for the purpose of studying the relations among these general characteristics and their process of development. The basic parameters which were measured include bankfull width and depth, channel slope, bed material size and shape, length of stream from drainage divide, and size of drainage area. The kinds of bedrock over which the streams flow were noted. In these streams the bankfull channel is filled by flows approximating the 2.3-year flood. By measuring the breadth and mean depth of the channel, it was possible to compute the bankfull mean velocity for each of the 119 sampling stations. These data were then used to compute the downstream changes in hydraulic geometry of the streams studied. This method has been called an indirect computation of the hydraulic geometry. The results obtained by the indirect method are similar to those of the direct method of other workers. The basins were studied by examining the relations of drainage area, discharge, and length of stream from drainage divide. For the streams investigated, excellent correlations were found to exist between drainage area and the 2.3-year flood, as well as between length of stream from the basin divide and drainage area. From these correlations it is possible to predict the discharge for the 2.3-year flood at any arbitrary point along the length of the stream. The long, intermediate, and short axes of pebbles sampled from the bed of the stream were recorded to study both size and sphericity changes along individual streams and among the streams studied. No systematic downstream changes in sphericity were found. Particle size changes are erratic and show no consistent relation to channel slope. Particle size decreases downstream in many streams but remains constant or increases in others. Addition of material by tributaries is one factor affecting particle size and another is the parent material. Wear does not appear to account for some of the changes noted in particle size in a downstream direction. Comparison with laboratory studies indicates that at least in some streams the downstream decrease in size is much greater than would be expected from wear alone. The type of bedrock underlying the channels included in this study appears to affect both channel slope and particle size. For a given length of stream, a stream channel underlain by sandstone tends to have a steeper slope and larger bed material than channels underlain by shale or limestone. Hence, a stream which heads in sandstone and ends in limestone tends to have a more rapid decrease in slope and particle size than a stream heading in limestone and ending in sandstone. The association of steep slopes and small particles for limestone channels implies that slope and particle size may show a vague correlation between lithologic groups although no correlation may exist within a given lithologic type. In addition to the effect of bedrock on slope and particle size, there is some evidence that channels in limestone or dolomite have a slightly smaller cross section at bankfull stage than channels in shale or sandstone. Near the headwaters of many of these streams, a deposit of periglacial rubble affects the slope and bed material size. Some of the debris contains residual boulders which are too large to be moved by ordinary floods and, therefore, impose larger particle sizes in the bed of the stream. The addition of this very coarse debris to the bed material is another example of the influence of geologic factors on stream channels even though the channel consists of unconsolidated debris instead of bedrock. The influence of geologic factors noted in selected streams in central Pennsylvania may not be directly applicable to areas other than the Appalachian Mountains, but the general process is no doubt similar in most areas. In large alluvial valleys bedrock cannot be much of an influencing factor; yet large, thick alluvial deposits and terraces are in a sense "bedrock" materials upon which the stream works to form the landscape.

Anion-Cation Permeability Correlates with Hydrated Counterion Size in Glycine Receptor Channels

PubMed Central

Sugiharto, Silas; Lewis, Trevor M.; Moorhouse, Andrew J.; Schofield, Peter R.; Barry, Peter H.

2008-01-01

The functional role of ligand-gated ion channels depends critically on whether they are predominantly permeable to cations or anions. However, these, and other ion channels, are not perfectly selective, allowing some counterions to also permeate. To address the mechanisms by which such counterion permeation occurs, we measured the anion-cation permeabilities of different alkali cations, Li+ Na+, and Cs+, relative to either Cl− or \\documentclass[10pt]{article} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{pmc} \\usepackage[Euler]{upgreek} \\pagestyle{empty} \\oddsidemargin -1.0in \\begin{document} \\begin{equation*}{\\mathrm{NO}}_{3}^{-}\\end{equation*}\\end{document} anions in both a wild-type glycine receptor channel (GlyR) and a mutant GlyR with a wider pore diameter. We hypothesized and showed that counterion permeation in anionic channels correlated inversely with an equivalent or effective hydrated size of the cation relative to the channel pore radius, with larger counterion permeabilities being observed in the wider pore channel. We also showed that the anion component of conductance was independent of the nature of the cation. We suggest that anions and counterion cations can permeate through the pore as neutral ion pairs, to allow the cations to overcome the large energy barriers resulting from the positively charged selectivity filter in small GlyR channels, with the permeability of such ion pairs being dependent on the effective hydrated diameter of the ion pair relative to the pore diameter. PMID:18708455

Modeling and Simulation of A Microchannel Cooling System for Vitrification of Cells and Tissues.

PubMed

Wang, Y; Zhou, X M; Jiang, C J; Yu, Y T

The microchannel heat exchange system has several advantages and can be used to enhance heat transfer for vitrification. To evaluate the microchannel cooling method and to analyze the effects of key parameters such as channel structure, flow rate and sample size. A computational flow dynamics model is applied to study the two-phase flow in microchannels and its related heat transfer process. The fluid-solid coupling problem is solved with a whole field solution method (i.e., flow profile in channels and temperature distribution in the system being simulated simultaneously). Simulation indicates that a cooling rate >10 4 C/min is easily achievable using the microchannel method with the high flow rate for a board range of sample sizes. Channel size and material used have significant impact on cooling performance. Computational flow dynamics is useful for optimizing the design and operation of the microchannel system.

A parallel finite element simulator for ion transport through three-dimensional ion channel systems.

PubMed

Tu, Bin; Chen, Minxin; Xie, Yan; Zhang, Linbo; Eisenberg, Bob; Lu, Benzhuo

2013-09-15

A parallel finite element simulator, ichannel, is developed for ion transport through three-dimensional ion channel systems that consist of protein and membrane. The coordinates of heavy atoms of the protein are taken from the Protein Data Bank and the membrane is represented as a slab. The simulator contains two components: a parallel adaptive finite element solver for a set of Poisson-Nernst-Planck (PNP) equations that describe the electrodiffusion process of ion transport, and a mesh generation tool chain for ion channel systems, which is an essential component for the finite element computations. The finite element method has advantages in modeling irregular geometries and complex boundary conditions. We have built a tool chain to get the surface and volume mesh for ion channel systems, which consists of a set of mesh generation tools. The adaptive finite element solver in our simulator is implemented using the parallel adaptive finite element package Parallel Hierarchical Grid (PHG) developed by one of the authors, which provides the capability of doing large scale parallel computations with high parallel efficiency and the flexibility of choosing high order elements to achieve high order accuracy. The simulator is applied to a real transmembrane protein, the gramicidin A (gA) channel protein, to calculate the electrostatic potential, ion concentrations and I - V curve, with which both primitive and transformed PNP equations are studied and their numerical performances are compared. To further validate the method, we also apply the simulator to two other ion channel systems, the voltage dependent anion channel (VDAC) and α-Hemolysin (α-HL). The simulation results agree well with Brownian dynamics (BD) simulation results and experimental results. Moreover, because ionic finite size effects can be included in PNP model now, we also perform simulations using a size-modified PNP (SMPNP) model on VDAC and α-HL. It is shown that the size effects in SMPNP can effectively lead to reduced current in the channel, and the results are closer to BD simulation results. Copyright © 2013 Wiley Periodicals, Inc.

Gadolinium and ruthenium red attenuate remote hind limb preconditioning-induced cardioprotection: possible role of TRP and especially TRPV channels.

PubMed

Randhawa, Puneet Kaur; Jaggi, Amteshwar Singh

2016-08-01

Remote ischemic preconditioning is a well reported therapeutic strategy that induces cardioprotective effects but the underlying intracellular mechanisms have not been widely explored. The current study was designed to investigate the involvement of TRP and especially TRPV channels in remote hind limb preconditioning-induced cardioprotection. Remote hind limb preconditioning stimulus (4 alternate cycles of inflation and deflation of 5 min each) was delivered using a blood pressure cuff tied on the hind limb of the anesthetized rat. Using Langendorff's system, the heart was perfused and subjected to 30-min ischemia and 120-min reperfusion. The myocardial injury was assessed by measuring infarct size, lactate dehydrogenase (LDH), creatine kinase (CK), LVDP, +dp/dtmax, -dp/dtmin, heart rate, and coronary flow rate. Gadolinium, TRP blocker, and ruthenium red, TRPV channel blocker, were employed as pharmacological tools. Remote hind limb preconditioning significantly reduced the infarct size, LDH release, CK release and improved coronary flow rate, hemodynamic parameters including LVDP, +dp/dtmax, -dp/dtmin, and heart rate. However, gadolinium (7.5 and 15 mg kg(-1)) and ruthenium red (4 and 8 mg kg(-1)) significantly attenuated the cardioprotective effects suggesting the involvement of TRP especially TRPV channels in mediating remote hind limb preconditioning-induced cardioprotection. Remote hind limb preconditioning stimulus possibly activates TRPV channels on the heart or sensory nerve fibers innervating the heart to induce cardioprotective effects. Alternatively, remote hind limb preconditioning stimulus may also activate the mechanosensitive TRP and especially TRPV channels on the sensory nerve fibers innervating the skeletal muscles to trigger cardioprotective neurogenic signaling cascade. The cardioprotective effects of remote hind limb preconditioning may be mediated via activation of mechanosensitive TRP and especially TRPV channels.

Scalable screen-size enlargement by multi-channel viewing-zone scanning holography.

PubMed

Takaki, Yasuhiro; Nakaoka, Mitsuki

2016-08-08

Viewing-zone scanning holographic displays can enlarge both the screen size and the viewing zone. However, limitations exist in the screen size enlargement process even if the viewing zone is effectively enlarged. This study proposes a multi-channel viewing-zone scanning holographic display comprising multiple projection systems and a planar scanner to enable the scalable enlargement of the screen size. Each projection system produces an enlarged image of the screen of a MEMS spatial light modulator. The multiple enlarged images produced by the multiple projection systems are seamlessly tiled on the planar scanner. This screen size enlargement process reduces the viewing zones of the projection systems, which are horizontally scanned by the planar scanner comprising a rotating off-axis lens and a vertical diffuser to enlarge the viewing zone. A screen size of 7.4 in. and a viewing-zone angle of 43.0° are demonstrated.

Laser-Driven Ion Acceleration from Plasma Micro-Channel Targets

PubMed Central

Zou, D. B.; Pukhov, A.; Yi, L. Q.; Zhou, H. B.; Yu, T. P.; Yin, Y.; Shao, F. Q.

2017-01-01

Efficient energy boost of the laser-accelerated ions is critical for their applications in biomedical and hadron research. Achiev-able energies continue to rise, with currently highest energies, allowing access to medical therapy energy windows. Here, a new regime of simultaneous acceleration of ~100 MeV protons and multi-100 MeV carbon-ions from plasma micro-channel targets is proposed by using a ~1020 W/cm2 modest intensity laser pulse. It is found that two trains of overdense electron bunches are dragged out from the micro-channel and effectively accelerated by the longitudinal electric-field excited in the plasma channel. With the optimized channel size, these “superponderomotive” energetic electrons can be focused on the front surface of the attached plastic substrate. The much intense sheath electric-field is formed on the rear side, leading to up to ~10-fold ionic energy increase compared to the simple planar geometry. The analytical prediction of the optimal channel size and ion maximum energies is derived, which shows good agreement with the particle-in-cell simulations. PMID:28218247

Laser-Driven Ion Acceleration from Plasma Micro-Channel Targets

NASA Astrophysics Data System (ADS)

Zou, D. B.; Pukhov, A.; Yi, L. Q.; Zhou, H. B.; Yu, T. P.; Yin, Y.; Shao, F. Q.

2017-02-01

Efficient energy boost of the laser-accelerated ions is critical for their applications in biomedical and hadron research. Achiev-able energies continue to rise, with currently highest energies, allowing access to medical therapy energy windows. Here, a new regime of simultaneous acceleration of ~100 MeV protons and multi-100 MeV carbon-ions from plasma micro-channel targets is proposed by using a ~1020 W/cm2 modest intensity laser pulse. It is found that two trains of overdense electron bunches are dragged out from the micro-channel and effectively accelerated by the longitudinal electric-field excited in the plasma channel. With the optimized channel size, these “superponderomotive” energetic electrons can be focused on the front surface of the attached plastic substrate. The much intense sheath electric-field is formed on the rear side, leading to up to ~10-fold ionic energy increase compared to the simple planar geometry. The analytical prediction of the optimal channel size and ion maximum energies is derived, which shows good agreement with the particle-in-cell simulations.

Laser beam micro-milling of nickel alloy: dimensional variations and RSM optimization of laser parameters

NASA Astrophysics Data System (ADS)

Ahmed, Naveed; Alahmari, Abdulrahman M.; Darwish, Saied; Naveed, Madiha

2016-12-01

Micro-channels are considered as the integral part of several engineering devices such as micro-channel heat exchangers, micro-coolers, micro-pulsating heat pipes and micro-channels used in gas turbine blades for aerospace applications. In such applications, a fluid flow is required to pass through certain micro-passages such as micro-grooves and micro-channels. The fluid flow characteristics (flow rate, turbulence, pressure drop and fluid dynamics) are mainly established based on the size and accuracy of micro-passages. Variations (oversizing and undersizing) in micro-passage's geometry directly affect the fluid flow characteristics. In this study, the micro-channels of several sizes are fabricated in well-known aerospace nickel alloy (Inconel 718) through laser beam micro-milling. The variations in geometrical characteristics of different-sized micro-channels are studied under the influences of different parameters of Nd:YAG laser. In order to have a minimum variation in the machined geometries of each size of micro-channel, the multi-objective optimization of laser parameters has been carried out utilizing the response surface methodology approach. The objective was set to achieve the targeted top widths and depths of micro-channels with minimum degree of taperness associated with the micro-channel's sidewalls. The optimized sets of laser parameters proposed for each size of micro-channel can be used to fabricate the micro-channels in Inconel 718 with minimum amount of geometrical variations.

Mapping ephemeral stream networks in desert environments using very-high-spatial-resolution multispectral remote sensing

DOE PAGES

Hamada, Yuki; O'Connor, Ben L.; Orr, Andrew B.; ...

2016-03-26

In this paper, understanding the spatial patterns of ephemeral streams is crucial for understanding how hydrologic processes influence the abundance and distribution of wildlife habitats in desert regions. Available methods for mapping ephemeral streams at the watershed scale typically underestimate the size of channel networks. Although remote sensing is an effective means of collecting data and obtaining information on large, inaccessible areas, conventional techniques for extracting channel features are not sufficient in regions that have small topographic gradients and subtle target-background spectral contrast. By using very high resolution multispectral imagery, we developed a new algorithm that applies landscape information tomore » map ephemeral channels in desert regions of the Southwestern United States where utility-scale solar energy development is occurring. Knowledge about landscape features and structures was integrated into the algorithm using a series of spectral transformation and spatial statistical operations to integrate information about landscape features and structures. The algorithm extracted ephemeral stream channels at a local scale, with the result that approximately 900% more ephemeral streams was identified than what were identified by using the U.S. Geological Survey’s National Hydrography Dataset. The accuracy of the algorithm in detecting channel areas was as high as 92%, and its accuracy in delineating channel center lines was 91% when compared to a subset of channel networks that were digitized by using the very high resolution imagery. Although the algorithm captured stream channels in desert landscapes across various channel sizes and forms, it often underestimated stream headwaters and channels obscured by bright soils and sparse vegetation. While further improvement is warranted, the algorithm provides an effective means of obtaining detailed information about ephemeral streams, and it could make a significant contribution toward improving the hydrological modelling of desert environments.« less

Mapping ephemeral stream networks in desert environments using very-high-spatial-resolution multispectral remote sensing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hamada, Yuki; O'Connor, Ben L.; Orr, Andrew B.

In this paper, understanding the spatial patterns of ephemeral streams is crucial for understanding how hydrologic processes influence the abundance and distribution of wildlife habitats in desert regions. Available methods for mapping ephemeral streams at the watershed scale typically underestimate the size of channel networks. Although remote sensing is an effective means of collecting data and obtaining information on large, inaccessible areas, conventional techniques for extracting channel features are not sufficient in regions that have small topographic gradients and subtle target-background spectral contrast. By using very high resolution multispectral imagery, we developed a new algorithm that applies landscape information tomore » map ephemeral channels in desert regions of the Southwestern United States where utility-scale solar energy development is occurring. Knowledge about landscape features and structures was integrated into the algorithm using a series of spectral transformation and spatial statistical operations to integrate information about landscape features and structures. The algorithm extracted ephemeral stream channels at a local scale, with the result that approximately 900% more ephemeral streams was identified than what were identified by using the U.S. Geological Survey’s National Hydrography Dataset. The accuracy of the algorithm in detecting channel areas was as high as 92%, and its accuracy in delineating channel center lines was 91% when compared to a subset of channel networks that were digitized by using the very high resolution imagery. Although the algorithm captured stream channels in desert landscapes across various channel sizes and forms, it often underestimated stream headwaters and channels obscured by bright soils and sparse vegetation. While further improvement is warranted, the algorithm provides an effective means of obtaining detailed information about ephemeral streams, and it could make a significant contribution toward improving the hydrological modelling of desert environments.« less

Modeling the Impact of Drizzle and 3D Cloud Structure on Remote Sensing of Effective Radius

NASA Technical Reports Server (NTRS)

Platnick, Steven; Zinner, Tobias; Ackerman, S.

2008-01-01

Remote sensing of cloud particle size with passive sensors like MODIS is an important tool for cloud microphysical studies. As a measure of the radiatively relevant droplet size, effective radius can be retrieved with different combinations of visible through shortwave infrared channels. MODIS observations sometimes show significantly larger effective radii in marine boundary layer cloud fields derived from the 1.6 and 2.1 pm channel observations than for 3.7 pm retrievals. Possible explanations range from 3D radiative transport effects and sub-pixel cloud inhomogeneity to the impact of drizzle formation on the droplet distribution. To investigate the potential influence of these factors, we use LES boundary layer cloud simulations in combination with 3D Monte Carlo simulations of MODIS observations. LES simulations of warm cloud spectral microphysics for cases of marine stratus and broken stratocumulus, each for two different values of cloud condensation nuclei density, produce cloud structures comprising droplet size distributions with and without drizzle size drops. In this study, synthetic MODIS observations generated from 3D radiative transport simulations that consider the full droplet size distribution will be generated for each scene. The operational MODIS effective radius retrievals will then be applied to the simulated reflectances and the results compared with the LES microphysics.

Effect of bait and gear type on channel catfish catch and turtle bycatch in a reservoir

USGS Publications Warehouse

Cartabiano, Evan C.; Stewart, David R.; Long, James M.

2014-01-01

Hoop nets have become the preferred gear choice to sample channel catfish Ictalurus punctatus but the degree of bycatch can be high, especially due to the incidental capture of aquatic turtles. While exclusion and escapement devices have been developed and evaluated, few have examined bait choice as a method to reduce turtle bycatch. The use of Zote™ soap has shown considerable promise to reduce bycatch of aquatic turtles when used with trotlines but its effectiveness in hoop nets has not been evaluated. We sought to determine the effectiveness of hoop nets baited with cheese bait or Zote™ soap and trotlines baited with shad or Zote™ soap as a way to sample channel catfish and prevent capture of aquatic turtles. We used a repeated-measures experimental design and treatment combinations were randomly assigned using a Latin-square arrangement. Eight sampling locations were systematically selected and then sampled with either hoop nets or trotlines using Zote™ soap (both gears), waste cheese (hoop nets), or cut shad (trotlines). Catch rates did not statistically differ among the gear–bait-type combinations. Size bias was evident with trotlines consistently capturing larger sized channel catfish compared to hoop nets. Results from a Monte Carlo bootstrapping procedure estimated the number of samples needed to reach predetermined levels of sampling precision to be lowest for trotlines baited with soap. Moreover, trotlines baited with soap caught no aquatic turtles, while hoop nets captured many turtles and had high mortality rates. We suggest that Zote™ soap used in combination with multiple hook sizes on trotlines may be a viable alternative to sample channel catfish and reduce bycatch of aquatic turtles.

Computational Fluid Dynamics-Population Balance Model Simulation of Effects of Cell Design and Operating Parameters on Gas-Liquid Two-Phase Flows and Bubble Distribution Characteristics in Aluminum Electrolysis Cells

NASA Astrophysics Data System (ADS)

Zhan, Shuiqing; Wang, Junfeng; Wang, Zhentao; Yang, Jianhong

2018-02-01

The effects of different cell design and operating parameters on the gas-liquid two-phase flows and bubble distribution characteristics under the anode bottom regions in aluminum electrolysis cells were analyzed using a three-dimensional computational fluid dynamics-population balance model. These parameters include inter-anode channel width, anode-cathode distance (ACD), anode width and length, current density, and electrolyte depth. The simulations results show that the inter-anode channel width has no significant effect on the gas volume fraction, electrolyte velocity, and bubble size. With increasing ACD, the above values decrease and more uniform bubbles can be obtained. Different effects of the anode width and length can be concluded in different cell regions. With increasing current density, the gas volume fraction and electrolyte velocity increase, but the bubble size keeps nearly the same. Increasing electrolyte depth decreased the gas volume fraction and bubble size in particular areas and the electrolyte velocity increased.

The lysosomal Ca2+ release channel TRPML1 regulates lysosome size by activating calmodulin

PubMed Central

Cao, Qi; Yang, Yiming; Zhong, Xi Zoë; Dong, Xian-Ping

2017-01-01

Intracellular lysosomal membrane trafficking, including fusion and fission, is crucial for cellular homeostasis and normal cell function. Both fusion and fission of lysosomal membrane are accompanied by lysosomal Ca2+ release. We recently have demonstrated that the lysosomal Ca2+ release channel P2X4 regulates lysosome fusion through a calmodulin (CaM)-dependent mechanism. However, the molecular mechanism underlying lysosome fission remains uncertain. In this study, we report that enlarged lysosomes/vacuoles induced by either vacuolin-1 or P2X4 activation are suppressed by up-regulating the lysosomal Ca2+ release channel transient receptor potential mucolipin 1 (TRPML1) but not the lysosomal Na+ release channel two-pore channel 2 (TPC2). Activation of TRPML1 facilitated the recovery of enlarged lysosomes/vacuoles. Moreover, the effects of TRPML1 on lysosome/vacuole size regulation were eliminated by Ca2+ chelation, suggesting a requirement for TRPML1-mediated Ca2+ release. We further demonstrate that the prototypical Ca2+ sensor CaM is required for the regulation of lysosome/vacuole size by TRPML1, suggesting that TRPML1 may promote lysosome fission by activating CaM. Given that lysosome fission is implicated in both lysosome biogenesis and reformation, our findings suggest that TRPML1 may function as a key lysosomal Ca2+ channel controlling both lysosome biogenesis and reformation. PMID:28360104

Ultra-High-Speed DNA Fragment Separations Using Microfabricated Capillary Array Electrophoresis Chips

NASA Astrophysics Data System (ADS)

Woolley, Adam T.; Mathies, Richard A.

1994-11-01

Capillary electrophoresis arrays have been fabricated on planar glass substrates by photolithographic masking and chemical etching techniques. The photolithographically defined channel patterns were etched in a glass substrate, and then capillaries were formed by thermally bonding the etched substrate to a second glass slide. High-resolution electrophoretic separations of φX174 Hae III DNA restriction fragments have been performed with these chips using a hydroxyethyl cellulose sieving matrix in the channels. DNA fragments were fluorescently labeled with dye in the running buffer and detected with a laser-excited, confocal fluorescence system. The effects of variations in the electric field, procedures for injection, and sizes of separation and injection channels (ranging from 30 to 120 μm) have been explored. By use of channels with an effective length of only 3.5 cm, separations of φX174 Hae III DNA fragments from ≈70 to 1000 bp are complete in only 120 sec. We have also demonstrated high-speed sizing of PCR-amplified HLA-DQα alleles. This work establishes methods for high-speed, high-throughput DNA separations on capillary array electrophoresis chips.

The problem of predicting the size distribution of sediment supplied by hillslopes to rivers

NASA Astrophysics Data System (ADS)

Sklar, Leonard S.; Riebe, Clifford S.; Marshall, Jill A.; Genetti, Jennifer; Leclere, Shirin; Lukens, Claire L.; Merces, Viviane

2017-01-01

Sediments link hillslopes to river channels. The size of sediments entering channels is a key control on river morphodynamics across a range of scales, from channel response to human land use to landscape response to changes in tectonic and climatic forcing. However, very little is known about what controls the size distribution of particles eroded from bedrock on hillslopes, and how particle sizes evolve before sediments are delivered to channels. Here we take the first steps toward building a geomorphic transport law to predict the size distribution of particles produced on hillslopes and supplied to channels. We begin by identifying independent variables that can be used to quantify the influence of five key boundary conditions: lithology, climate, life, erosion rate, and topography, which together determine the suite of geomorphic processes that produce and transport sediments on hillslopes. We then consider the physical and chemical mechanisms that determine the initial size distribution of rock fragments supplied to the hillslope weathering system, and the duration and intensity of weathering experienced by particles on their journey from bedrock to the channel. We propose a simple modeling framework with two components. First, the initial rock fragment sizes are set by the distribution of spacing between fractures in unweathered rock, which is influenced by stresses encountered by rock during exhumation and by rock resistance to fracture propagation. That initial size distribution is then transformed by a weathering function that captures the influence of climate and mineralogy on chemical weathering potential, and the influence of erosion rate and soil depth on residence time and the extent of particle size reduction. Model applications illustrate how spatial variation in weathering regime can lead to bimodal size distributions and downstream fining of channel sediment by down-valley fining of hillslope sediment supply, two examples of hillslope control on river sediment size. Overall, this work highlights the rich opportunities for future research into the controls on the size of sediments produced on hillslopes and delivered to channels.

Crowd counting via region based multi-channel convolution neural network

NASA Astrophysics Data System (ADS)

Cao, Xiaoguang; Gao, Siqi; Bai, Xiangzhi

2017-11-01

This paper proposed a novel region based multi-channel convolution neural network architecture for crowd counting. In order to effectively solve the perspective distortion in crowd datasets with a great diversity of scales, this work combines the main channel and three branch channels. These channels extract both the global and region features. And the results are used to estimate density map. Moreover, kernels with ladder-shaped sizes are designed across all the branch channels, which generate adaptive region features. Also, branch channels use relatively deep and shallow network to achieve more accurate detector. By using these strategies, the proposed architecture achieves state-of-the-art performance on ShanghaiTech datasets and competitive performance on UCF_CC_50 datasets.

Nearly ideal binary communication in squeezed channels

NASA Astrophysics Data System (ADS)

Paris, Matteo G.

2001-07-01

We analyze the effect of squeezing the channel in binary communication based on Gaussian states. We show that for coding on pure states, squeezing increases the detection probability at fixed size of the strategy, actually saturating the optimal bound already for moderate signal energy. Using Neyman-Pearson lemma for fuzzy hypothesis testing we are able to analyze also the case of mixed states, and to find the optimal amount of squeezing that can be effectively employed. It results that optimally squeezed channels are robust against signal mixing, and largely improve the strategy power by comparison with coherent ones.

Variable is better than invariable: sparse VSS-NLMS algorithms with application to adaptive MIMO channel estimation.

PubMed

Gui, Guan; Chen, Zhang-xin; Xu, Li; Wan, Qun; Huang, Jiyan; Adachi, Fumiyuki

2014-01-01

Channel estimation problem is one of the key technical issues in sparse frequency-selective fading multiple-input multiple-output (MIMO) communication systems using orthogonal frequency division multiplexing (OFDM) scheme. To estimate sparse MIMO channels, sparse invariable step-size normalized least mean square (ISS-NLMS) algorithms were applied to adaptive sparse channel estimation (ACSE). It is well known that step-size is a critical parameter which controls three aspects: algorithm stability, estimation performance, and computational cost. However, traditional methods are vulnerable to cause estimation performance loss because ISS cannot balance the three aspects simultaneously. In this paper, we propose two stable sparse variable step-size NLMS (VSS-NLMS) algorithms to improve the accuracy of MIMO channel estimators. First, ASCE is formulated in MIMO-OFDM systems. Second, different sparse penalties are introduced to VSS-NLMS algorithm for ASCE. In addition, difference between sparse ISS-NLMS algorithms and sparse VSS-NLMS ones is explained and their lower bounds are also derived. At last, to verify the effectiveness of the proposed algorithms for ASCE, several selected simulation results are shown to prove that the proposed sparse VSS-NLMS algorithms can achieve better estimation performance than the conventional methods via mean square error (MSE) and bit error rate (BER) metrics.

Variable Is Better Than Invariable: Sparse VSS-NLMS Algorithms with Application to Adaptive MIMO Channel Estimation

PubMed Central

Gui, Guan; Chen, Zhang-xin; Xu, Li; Wan, Qun; Huang, Jiyan; Adachi, Fumiyuki

2014-01-01

Channel estimation problem is one of the key technical issues in sparse frequency-selective fading multiple-input multiple-output (MIMO) communication systems using orthogonal frequency division multiplexing (OFDM) scheme. To estimate sparse MIMO channels, sparse invariable step-size normalized least mean square (ISS-NLMS) algorithms were applied to adaptive sparse channel estimation (ACSE). It is well known that step-size is a critical parameter which controls three aspects: algorithm stability, estimation performance, and computational cost. However, traditional methods are vulnerable to cause estimation performance loss because ISS cannot balance the three aspects simultaneously. In this paper, we propose two stable sparse variable step-size NLMS (VSS-NLMS) algorithms to improve the accuracy of MIMO channel estimators. First, ASCE is formulated in MIMO-OFDM systems. Second, different sparse penalties are introduced to VSS-NLMS algorithm for ASCE. In addition, difference between sparse ISS-NLMS algorithms and sparse VSS-NLMS ones is explained and their lower bounds are also derived. At last, to verify the effectiveness of the proposed algorithms for ASCE, several selected simulation results are shown to prove that the proposed sparse VSS-NLMS algorithms can achieve better estimation performance than the conventional methods via mean square error (MSE) and bit error rate (BER) metrics. PMID:25089286

A method for improving predictions of bed-load discharges to reservoirs

USGS Publications Warehouse

Lopes, V.L.; Osterkamp, W.R.; Bravo-Espinosa, M.

2007-01-01

Effective management options for mitigating the loss of reservoir water storage capacity to sedimentation depend on improved predictions of bed-load discharges into the reservoirs. Most predictions of bed-load discharges, however, are based on the assumption that the rates of bed-load sediment availability equal the transport capacity of the flow, ignoring the spatio-temporal variability of the sediment supply. This paper develops a semiquantitative method to characterize bed-load sediment transport in alluvial channels, assuming a channel reach is non-supply limited when the bed-load discharge of a given sediment particle-size class is functionally related to the energy that is available to transport that fraction of the total bed-load. The method was applied to 22 alluvial stream channels in the USA to determine whether a channel reach had a supply-limited or non-supply-limited bed-load transport regime. The non-supply-limited transport regime was further subdivided into two groups on the basis of statistical tests. The results indicated the pattern of bed-load sediment transport in alluvial channels depends on the complete spectrum of sediment particle sizes available for transport rather than individual particle-size fractions represented by one characteristic particle size. The application of the method developed in this paper should assist reservoir managers in selecting bed-load sediment transport equations to improve predictions of bed-load discharge in alluvial streams, thereby significantly increasing the efficiency of management options for maintaining the storage capacity of waterbodies. ?? 2007 Blackwell Publishing Asia Pty Ltd.

Catch of channel catfish with tandem-set hoop nets and gill nets in lentic systems of Nebraska

USGS Publications Warehouse

Richters, Lindsey K.; Pope, Kevin L.

2011-01-01

Twenty-six Nebraska water bodies representing two ecosystem types (small standing waters and large standing waters) were surveyed during 2008 and 2009 with tandem-set hoop nets and experimental gill nets to determine if similar trends existed in catch rates and size structures of channel catfish Ictalurus punctatus captured with these gears. Gear efficiency was assessed as the number of sets (nets) that would be required to capture 100 channel catfish given observed catch per unit effort (CPUE). Efficiency of gill nets was not correlated with efficiency of hoop nets for capturing channel catfish. Small sample sizes prohibited estimation of proportional size distributions in most surveys; in the four surveys for which sample size was sufficient to quantify length-frequency distributions of captured channel catfish, distributions differed between gears. The CPUE of channel catfish did not differ between small and large water bodies for either gear. While catch rates of hoop nets were lower than rates recorded in previous studies, this gear was more efficient than gill nets at capturing channel catfish. However, comparisons of size structure between gears may be problematic.

Dependence of Grain Size on the Performance of a Polysilicon Channel TFT for 3D NAND Flash Memory.

PubMed

Kim, Seung-Yoon; Park, Jong Kyung; Hwang, Wan Sik; Lee, Seung-Jun; Lee, Ki-Hong; Pyi, Seung Ho; Cho, Byung Jin

2016-05-01

We investigated the dependence of grain size on the performance of a polycrystalline silicon (poly-Si) channel TFT for application to 3D NAND Flash memory devices. It has been found that the device performance and memory characteristics are strongly affected by the grain size of the poly-Si channel. Higher on-state current, faster program speed, and poor endurance/reliability properties are observed when the poly-Si grain size is large. These are mainly attributed to the different local electric field induced by an oxide valley at the interface between the poly-Si channel and the gate oxide. In addition, the trap density at the gate oxide interface was successfully measured using a charge pumping method by the separation between the gate oxide interface traps and traps at the grain boundaries in the poly-Si channel. The poly-Si channel with larger grain size has lower interface trap density.

Electrokinetic mixing at high zeta potentials: ionic size effects on cross stream diffusion.

PubMed

Ahmadian Yazdi, Alireza; Sadeghi, Arman; Saidi, Mohammad Hassan

2015-03-15

The electrokinetic phenomena at high zeta potentials may show several unique features which are not normally observed. One of these features is the ionic size (steric) effect associated with the solutions of high ionic concentration. In the present work, attention is given to the influences of finite ionic size on the cross stream diffusion process in an electrokinetically actuated Y-shaped micromixer. The method consists of a finite difference based numerical approach for non-uniform grid which is applied to the dimensionless form of the governing equations, including the modified Poisson-Boltzmann equation. The results reveal that, neglecting the ionic size at high zeta potentials gives rise to the overestimation of the mixing length, because the steric effects retard liquid flow, thereby enhancing the mixing efficiency. The importance of steric effects is found to be more intense for channels of smaller width to height ratio. It is also observed that, in sharp contrast to the conditions that the ions are treated as point charges, increasing the zeta potential improves the cross stream diffusion when incorporating the ionic size. Moreover, increasing the EDL thickness decreases the mixing length, whereas the opposite is true for the channel aspect ratio. Copyright © 2014 Elsevier Inc. All rights reserved.

Connectivity of earthquake-triggered landslides with the fluvial network: Implications for landslide sediment transport after the 2008 Wenchuan earthquake

NASA Astrophysics Data System (ADS)

Li, Gen; West, A. Joshua; Densmore, Alexander L.; Hammond, Douglas E.; Jin, Zhangdong; Zhang, Fei; Wang, Jin; Hilton, Robert G.

2016-04-01

Evaluating the influence of earthquakes on erosion, landscape evolution, and sediment-related hazards requires understanding fluvial transport of material liberated in earthquake-triggered landslides. The location of landslides relative to river channels is expected to play an important role in postearthquake sediment dynamics. In this study, we assess the position of landslides triggered by the Mw 7.9 Wenchuan earthquake, aiming to understand the relationship between landslides and the fluvial network of the steep Longmen Shan mountain range. Combining a landslide inventory map and geomorphic analysis, we quantify landslide-channel connectivity in terms of the number of landslides, landslide area, and landslide volume estimated from scaling relationships. We observe a strong spatial variability in landslide-channel connectivity, with volumetric connectivity (ξ) ranging from ~20% to ~90% for different catchments. This variability is linked to topographic effects that set local channel densities, seismic effects (including seismogenic faulting) that regulate landslide size, and substrate effects that may influence both channelization and landslide size. Altogether, we estimate that the volume of landslides connected to channels comprises 43 + 9/-7% of the total coseismic landslide volume. Following the Wenchuan earthquake, fine-grained (<~0.25 mm) suspended sediment yield across the Longmen Shan catchments is positively correlated to catchment-wide landslide density, but this correlation is statistically indistinguishable whether or not connectivity is considered. The weaker-than-expected influence of connectivity on suspended sediment yield may be related to mobilization of fine-grained landslide material that resides in hillslope domains, i.e., not directly connected to river channels. In contrast, transport of the coarser fraction (which makes up >90% of the total landslide volume) may be more significantly affected by landslide locations.

COMPARISON OF POND AND RACEWAY PRODUCTION METHODS ON TEXTURE OF CHANNEL CATFISH (Ictalurus punctatus) FILLETS, SHOWING A DEPENDENCY ON SIZE AND FILLET POSITION

USDA-ARS?s Scientific Manuscript database

The objective of this study was to compare the effect of the production environment (pond vs in-pond raceway) on the chemical composition, color, and textural properties of channel catfish fillets. Compositional analysis consisted of percent moisture, lipid, protein, and ash content. Additional sa...

Experimental evaluation of the effect of winter feeding on channel catfish growout pond plankton

USDA-ARS?s Scientific Manuscript database

Ten, 0.25 acre ponds at the UAPB Aquaculture Station were sampled weekly from Dec. 7-Feb. 22 (n=90) for phytoplankton and zooplankton. Five of the ponds were randomly assigned to each of two treatments: no feeding and feeding based on recommended rates. Channel catfish sizes and numbers approximated...

Geomorphic controls on hyporheic exchange flow in mountain streams.

Treesearch

T. Kasahara; S.M. Wondzell

2003-01-01

Hyporheic exchange flows were simulated using MODFLOW and MODPATH to estimate relative effects of channel morphologic features on the extent of the hyporheic zone, on hyporheic exchange flow, and on the residence time of stream water in the hyporheic zone. Four stream reaches were compared in order to examine the influence of stream size and channel constraint. Within...

Impact of dynamic distribution of floc particles on flocculation effect.

PubMed

Nan, Jun; He, Weipeng; Song, Xinin; Li, Guibai

2009-01-01

Polyaluminum chloride (PAC) was used as coagulant and suspended particles in kaolin water. Online instruments including turbidimeter and particle counter were used to monitor the flocculation process. An evaluation model for demonstrating the impact on the flocculation effect was established based on the multiple linear regression analysis method. The parameter of the index weight of channels quantitatively described how the variation of floc particle population in different size ranges cause the decrement of turbidity. The study showed that the floc particles in different size ranges contributed differently to the decrease of turbidity and that the index weight of channel could excellently indicate the impact degree of floc particles dynamic distribution on flocculation effect. Therefore, the parameter may significantly benefit the development of coagulation and sedimentation techniques as well as the optimal coagulant selection.

Surface Effect on Oil Transportation in Nanochannel: a Molecular Dynamics Study.

PubMed

Zheng, Haixia; Du, Yonggang; Xue, Qingzhong; Zhu, Lei; Li, Xiaofang; Lu, Shuangfang; Jin, Yakang

2017-12-01

In this work, we investigate the dynamics mechanism of oil transportation in nanochannel using molecular dynamics simulations. It is demonstrated that the interaction between oil molecules and nanochannel has a great effect on the transportation properties of oil in nanochannel. Because of different interactions between oil molecules and channel, the center of mass (COM) displacement of oil in a 6-nm channel is over 30 times larger than that in a 2-nm channel, and the diffusion coefficient of oil molecules at the center of a 6-nm channel is almost two times more than that near the channel surface. Besides, it is found that polarity of oil molecules has the effect on impeding oil transportation, because the electrostatic interaction between polar oil molecules and channel is far larger than that between nonpolar oil molecules and channel. In addition, channel component is found to play an important role in oil transportation in nanochannel, for example, the COM displacement of oil in gold channel is very few due to great interaction between oil and gold substrate. It is also found that nano-sized roughness of channel surface greatly influences the speed and flow pattern of oil. Our findings would contribute to revealing the mechanism of oil transportation in nanochannels and therefore are very important for design of oil extraction in nanochannels.

Monitoring bedload entrainment and transport in snowmelt-dominated forest streams of the Columbia Mountains, Canada

NASA Astrophysics Data System (ADS)

Green, Kim; Brardinoni, Francesco; Alila, Younes

2014-05-01

We monitor bedload transport and water discharge at six stations in two forested headwater streams of the Columbia Mountains, Canada. The monitoring network of sediment traps is designed to examine the effects of channel bed texture, and the influence of alluvial (i.e., step pools, and riffle pools) and semi-alluvial morphologies (i.e., boulder cascades and forced step pools) on bedload entrainment and transport. Results suggest that patterns of bedload entrainment are influenced by flow resistance while the value of the critical dimensionless shear stress for mobilization of the surface D50 varies due to channel gradient, grain sheltering effects and, to a less extent, flow resistance. Regardless of channel morphology we observe: (i) equal-threshold entrainment for all mobile grains in channels with high grain and/or form resistance; and (ii) initial equal-threshold entrainment of calibers ≤ 22mm, and subsequent size-selective entrainment of coarser material in channels with low form resistance (e.g. riffle pool). Scaled fractional analysis reveals that in reaches with high flow resistance most bedload transport occurs in partial mobility fashion relative to the available bed material and that only material finer than 16mm attains full mobility during over-bank flows. Equal mobility transport for a wider range of grain sizes is achieved in reaches with reduced flow resistance. Evaluation of bedload rating curves across sites identifies that grain effects predominate with respect to bedload flux whereas morphological effects (i.e. form resistance) play a secondary role. Application of selected empirical formulae developed in steep alpine channels present variable success in predicting transport rates in the study reaches.

Channel Control Structures for Souris River, Minot, North Dakota. Hydraulic Model Investigation.

DTIC Science & Technology

1981-04-01

in good agreement with other broad - and sharp - crested weirs . 19. Early testing of the typical type I structure indicated that the size of the riprap...III structure (Figure 4) will consist of a concrete weir with a crest lo- cated 10.0 ft above the channel bottom with a 1-ft-high end sill at the end...to the channel, was effective in preventing significant head differ- ential and damage to the strucLure with overbank flow conditions. The weir crest

The coevolution of bed roughness, grain clustering, surface armoring, hydraulic roughness, and sediment transport rate in experimental coarse alluvial channels: implications for long-term effects of gravel augmentation

NASA Astrophysics Data System (ADS)

Johnson, J. P.; Aronovitz, A. C.

2012-12-01

We conducted laboratory flume experiments to quantify changes in multiple factors leading to mountain river bed stability (i.e., minimal bed changes in space and time), and to understand how stable beds respond to perturbations in sediment supply. Experiments were run in a small flume 4 m long by 0.1 m wide. We imposed an initial well-graded size distribution of sediment (from coarse sand to up to 4 cm clasts), a steady water discharge (0.9 L/s), and initial bed surface slopes (8% and 12%). We measured outlet sediment flux and size distribution, bed topography and surface size distributions, and water depths; from these we calculated total shear stress, form drag and skin friction stress partitioning, and hydraulic roughness. The bed was initially allowed to stabilize with no imposed upstream sediment flux. This stabilization occurred due to significant changes in all of the factors listed in the title, and resulted in incipient step-pool like bed morphologies. In addition, this study was designed to explore possible long-term effects of gravel augmentation on mountain channel morphology and surface grain size. While the short-term goal of gravel augmentation is usually to cause fining of surface sediment patches, we find that the long-term effects may be opposite. We perturbed the stabilized channels by temporarily imposing an upstream sediment flux of the finest sediment size fraction (sand to granules). Median surface sizes initially decreased due to fine sediment deposition, although transport rates of intermediate-sized grains increased. When the fine sediment supply was stopped, beds evolved to be both rougher and coarser than they had been previously, because the largest grains remained on the bed but intermediate-sized grains were preferentially transported out, leaving higher fractions of larger grains on the surface. Existing models for mixed grain size transport actually predict changes in mobilization reasonably well, but do not explicity account for surface roughness evolution. Our results indicate a nonlinear relationship between surface median grain size and bed roughness.

Low resistance, large dimension entrance to the inner cavity of BK channels determined by changing side-chain volume

PubMed Central

Niu, Xiaowei

2011-01-01

Large-conductance Ca2+- and voltage-activated K+ (BK) channels have the largest conductance (250–300 pS) of all K+-selective channels. Yet, the contributions of the various parts of the ion conduction pathway to the conductance are not known. Here, we examine the contribution of the entrance to the inner cavity to the large conductance. Residues at E321/E324 on each of the four α subunits encircle the entrance to the inner cavity. To determine if 321/324 is accessible from the inner conduction pathway, we measured single-channel current amplitudes before and after exposure and wash of thiol reagents to the intracellular side of E321C and E324C channels. MPA− increased currents and MTSET+ decreased currents, with no difference between positions 321 and 324, indicating that side chains at 321/324 are accessible from the inner conduction pathway and have equivalent effects on conductance. For neutral amino acids, decreasing the size of the entrance to the inner cavity by substituting large side-chain amino acids at 321/324 decreased outward single-channel conductance, whereas increasing the size of the entrance with smaller side-chain substitutions had little effect. Reductions in outward conductance were negated by high [K+]i. Substitutions had little effect on inward conductance. Fitting plots of conductance versus side-chain volume with a model consisting of one variable and one fixed resistor in series indicated an effective diameter and length of the entrance to the inner cavity for wild-type channels of 17.7 and 5.6 Å, respectively, with the resistance of the entrance ∼7% of the total resistance of the conduction pathway. The estimated dimensions are consistent with the structure of MthK, an archaeal homologue to BK channels. Our observations suggest that BK channels have a low resistance, large entrance to the inner cavity, with the entrance being as large as necessary to not limit current, but not much larger. PMID:21576375

Numerical Simulation and Performance Optimization of a Magnetophoretic Bio-separation chip

NASA Astrophysics Data System (ADS)

Golozar, Matin; Darabi, Jeff; Molki, Majid

Separation of micro/nanoparticles is important in biomedicine and biotechnology. This research presents the modeling and optimization of a magnetophoretic bio-separation chip for the isolation of biomaterials, such as circulating tumor cells (CTCs) from the peripheral blood. The chip consists of a continuous flow through microfluidic channels that contains locally engineered magnetic field gradients. The high gradient magnetic field produced by the magnets is spatially non-uniform and gives rise to an attractive force on magnetic particles that move through the flow channel. The computational model takes into account the magnetic and fluidic forces as well as the effect of the volume fraction of particles on the continuous phase. The model is used to investigate the effect of two-way particle-fluid coupling on both the capture efficiency and the flow pattern in the separation chip. The results show that the microfluidic device has the capability of separating CTCs from their native environment. Additionally, a parametric study is performed to investigate the effects of the channel height, substrate thickness, magnetic bead size, bioparticle size, and the number of beads per cell on the cell separation performance.

Surface Modulation of Graphene Field Effect Transistors on Periodic Trench Structure.

PubMed

Jin, Jun Eon; Choi, Jun Hee; Yun, Hoyeol; Jang, Ho-Kyun; Lee, Byung Chul; Choi, Ajeong; Joo, Min-Kyu; Dettlaff-Weglikowska, Urszula; Roth, Siegmar; Lee, Sang Wook; Lee, Jae Woo; Kim, Gyu Tae

2016-07-20

In this work, graphene field effect transistors (FETs) were fabricated on a trench structure made by carbonized poly(methylmethacrylate) to modify the graphene surface. The trench-structured devices showed different characteristics depending on the channel orientation and the pitch size of the trenches as well as channel area in the FETs. Periodic corrugations and barriers of suspended graphene on the trench structure were measured by atomic force microscopy and electrostatic force microscopy. Regular barriers of 160 mV were observed for the trench structure with graphene. To confirm the transfer mechanism in the FETs depending on the channel orientation, the ratio of experimental mobility (3.6-3.74) was extracted from the current-voltage characteristics using equivalent circuit simulation. It is shown that the number of barriers increases as the pitch size decreases because the number of corrugations increases from different trench pitches. The noise for the 140 nm pitch trench is 1 order of magnitude higher than that for the 200 nm pitch trench.

Critical heat flux for water boiling in channels. Modern state, typical regularities, unsolved problems, and ways for solving them (a review)

NASA Astrophysics Data System (ADS)

Bobkov, V. P.

2015-02-01

Some general matters concerned with description of burnout in channels are outlined. Data obtained from experimental investigations on critical heat fluxes (CHF) in different channels, CHF data banks, the main determining parameters, CHF basic dependences, and a system of correction functions are discussed. Two methods for estimating the CHF description errors are analyzed. The influence of operating parameters, transverse sizes of channels, and conditions at their inlet are analyzed. The effects of heat-transfer surface shape and heat supply arrangement are considered for concentric annular channels. The notions of a thermal boundary layer and an elementary thermal cell during burnout in channels with an intricate cross section are defined. New notions for describing CHF in rod assemblies are introduced: bundle effect, thermal misalignment, assembly-section-averaged and local parameters (for an elementary cell), cell-wise CHF analysis in bundles, and standard and nonstandard cells. Possible influence of wall thermophysical properties on CHF in dense assemblies and other effects are considered. Thermal interaction of nonequivalent cells and the effect of heat supply arrangement over the cell perimeter are analyzed. Special attention is paid to description of the effect the heat release nonuniformity along the channels has on CHF. Objectives to be pursued by studies of CHF in channels of different cross-section shapes are formulated.

Numerical Model of Channel and Aquatic Habitat Response to Sediment Pulses in Mountain Rivers of Central Idaho

NASA Astrophysics Data System (ADS)

Lewicki, M.; Buffington, J. M.; Thurow, R. F.; Isaak, D. J.

2006-12-01

Mountain rivers in central Idaho receive pulsed sediment inputs from a variety of mass wasting processes (side-slope landslides, rockfalls, and tributary debris flows). Tributary debris flows and hyperconcentrated flows are particularly common due to winter "rain-on-snow" events and summer thunderstorms, the effects of which are amplified by frequent wildfire and resultant changes in vegetation, soil characteristics, and basin hydrology. Tributary confluences in the study area are commonly characterized by debris fans built by these repeated sediment pulses, providing long-term controls on channel slope, hydraulics and sediment transport capacity in the mainstem channel network. These long-term impacts are magnified during debris-flow events, which deliver additional sediment and wood debris to the fan and may block the mainstem river. These changes in physical conditions also influence local and downstream habitat for aquatic species, and can impact local human infrastructure (roads, bridges). Here, we conduct numerical simulations using a modified version of Cui's [2005] network routing model to examine bedload transport and debris-fan evolution in medium- sized watersheds (65-570 km2) of south-central Idaho. We test and calibrate the model using data from a series of postfire debris-flow events that occurred from 2003-4. We investigate model sensitivity to different controlling factors (location of the pulse within the stream network, volume of the pulse, and size distribution of the input material). We predict that on decadal time scales, sediment pulses cause a local coarsening of the channel bed in the vicinity of the sediment input, and a wave of downstream fining over several kilometers of the river (as long as the pulse material is not coarser than the stream bed itself). The grain-size distribution of the pulse influences its rate of erosion, the rate and magnitude of downstream fining, and the time required for system recovery. The effects of textural fining on spawning habitat depend on the size of sediment in the wave relative to that of the downstream channel; fining can improve spawning habitat availability in channels that are otherwise too coarse, or degrade habitat availability in finer-grained channels. Despite the perceived negative effects of sediment pulses, they can be important sources of gravel and wood debris, creating downstream spawning sites and productive wood-forced habitats. Field observations illustrate that opportunistic salmonids will spawn along the margins of recently deposited debris fans, emphasizing the biological value of such disturbances and the plasticity of salmonids to natural disturbances.

Adaptive UEP and Packet Size Assignment for Scalable Video Transmission over Burst-Error Channels

NASA Astrophysics Data System (ADS)

Lee, Chen-Wei; Yang, Chu-Sing; Su, Yih-Ching

2006-12-01

This work proposes an adaptive unequal error protection (UEP) and packet size assignment scheme for scalable video transmission over a burst-error channel. An analytic model is developed to evaluate the impact of channel bit error rate on the quality of streaming scalable video. A video transmission scheme, which combines the adaptive assignment of packet size with unequal error protection to increase the end-to-end video quality, is proposed. Several distinct scalable video transmission schemes over burst-error channel have been compared, and the simulation results reveal that the proposed transmission schemes can react to varying channel conditions with less and smoother quality degradation.

Basin-scale availability of salmonid spawning gravel as influenced by channel type and hydraulic roughness in mountain catchments.

Treesearch

John M. Buffington; David R. Montgomery; Harvey M. Greenberg

2004-01-01

A general framework is presented for examining the effects of channel type and associated hydraulic roughness on salmonid spawning-gravel availability in mountain catchments. Digital elevation models are coupled with grain-size predictions to provide basin-scale assessments of the potential extent and spatial pattern of spawning gravels. To demonstrate both the model...

A micro-machined piezoelectric flexural-mode hydrophone with air backing: a hydrostatic pressure-balancing mechanism for integrity preservation.

PubMed

Choi, Sungjoon; Lee, Haksue; Moon, Wonkyu

2010-09-01

Although an air-backed thin plate is an effective sound receiver structure, it is easily damaged via pressure unbalance caused by external hydrostatic pressure. To overcome this difficulty, a simple pressure-balancing module is proposed. Despite its small size and relative simplicity, with proper design and operation, micro-channel structure provides a solution to the pressure-balancing problem. If the channel size is sufficiently small, the gas-liquid interface may move back and forth without breach by the hydrostatic pressure since the surface tension can retain the interface surface continuously. One input port of the device is opened to an intermediate liquid, while the other port is connected to the air-backing chamber. As the hydrostatic pressure increases, the liquid in the micro-channel compresses the air, and the pressure in the backing chamber is then equalized to match the external hydrostatic pressure. To validate the performance of the proposed mechanism, a micro-channel prototype is designed and integrated with the piezoelectric micro-machined flexural sensor developed in our previous work. The working principle of the mechanism is experimentally verified. In addition, the effect of hydrostatic pressure on receiving sensitivity is evaluated and compared with predicted behavior.

The Effects of Dams on Downstream Channel Characteristics in Pennsylvania and Maryland: Assessing the Potential Consequences of Dam Removal

NASA Astrophysics Data System (ADS)

Skalak, K. J.; Pizzuto, J. E.; Jenkins, P.

2003-12-01

The potential downstream effects of dam removal were assessed on fifteen sites of varying dam size and characteristics in Pennsylvania and Maryland. The dams ranged in size from a 30 cm high fish weir to a water supply dam 57 m high. Stream order ranged from 1 to 4. The dams are located in watersheds with varying degrees of human disturbance and urbanization. The dams are also operated differently, with significant consequences for hydraulic residence time and downstream flow variability. Most streams were alluvial, but 6 of the reaches were clearly bedrock channels. We hypothesize that the channel upstream, which is unaffected by the dam, will provide an accurate model for the channel downstream of the dam long after dam removal. Therefore, reaches upstream and downstream of the dam were compared to determine the effects of the dam as well as the condition of the stream that will ultimately develop decades after dam removal. Surprisingly, the dams had no consistent influence on channel morphology. However, the percentage of sand is significantly lower downstream than upstream: the mean % sand downstream is 11.47%, while the mean % sand upstream is 21.39%. The coarser fractions of the bed, as represented by the 84th percentile grain diameter, are unaffected by the presence of the dam. These results imply that decades after dam removal, the percentage of sand on the bed will increase, but the coarse fraction of the bed will remain relatively unchanged.

Critical band masking reveals the effects of optical distortions on the channel mediating letter identification.

PubMed

Young, Laura K; Smithson, Hannah E

2014-01-01

There is evidence that letter identification is mediated by only a narrow band of spatial frequencies and that the center frequency of the neural channel thought to underlie this selectivity is related to the size of the letters. When letters are spatially filtered (at a fixed size) the channel tuning characteristics change according to the properties of the spatial filter (Majaj et al., 2002). Optical aberrations in the eye act to spatially filter the image formed on the retina-their effect is generally to attenuate high frequencies more than low frequencies but often in a non-monotonic way. We might expect the change in the spatial frequency spectrum caused by the aberration to predict the shift in channel tuning observed for aberrated letters. We show that this is not the case. We used critical-band masking to estimate channel-tuning in the presence of three types of aberration-defocus, coma and secondary astigmatism. We found that the maximum masking was shifted to lower frequencies in the presence of an aberration and that this result was not simply predicted by the spatial-frequency-dependent degradation in image quality, assessed via metrics that have previously been shown to correlate well with performance loss in the presence of an aberration. We show that if image quality effects are taken into account (using visual Strehl metrics), the neural channel required to model the data is shifted to lower frequencies compared to the control (no-aberration) condition. Additionally, we show that when spurious resolution (caused by π phase shifts in the optical transfer function) in the image is masked, the channel tuning properties for aberrated letters are affected, suggesting that there may be interference between visual channels. Even in the presence of simulated aberrations, whose properties change from trial-to-trial, observers exhibit flexibility in selecting the spatial frequencies that support letter identification.

Effective pore size and radius of capture for K(+) ions in K-channels.

PubMed

Moldenhauer, Hans; Díaz-Franulic, Ignacio; González-Nilo, Fernando; Naranjo, David

2016-02-02

Reconciling protein functional data with crystal structure is arduous because rare conformations or crystallization artifacts occur. Here we present a tool to validate the dimensions of open pore structures of potassium-selective ion channels. We used freely available algorithms to calculate the molecular contour of the pore to determine the effective internal pore radius (r(E)) in several K-channel crystal structures. r(E) was operationally defined as the radius of the biggest sphere able to enter the pore from the cytosolic side. We obtained consistent r(E) estimates for MthK and Kv1.2/2.1 structures, with r(E) = 5.3-5.9 Å and r(E) = 4.5-5.2 Å, respectively. We compared these structural estimates with functional assessments of the internal mouth radii of capture (r(C)) for two electrophysiological counterparts, the large conductance calcium activated K-channel (r(C) = 2.2 Å) and the Shaker Kv-channel (r(C) = 0.8 Å), for MthK and Kv1.2/2.1 structures, respectively. Calculating the difference between r(E) and r(C), produced consistent size radii of 3.1-3.7 Å and 3.6-4.4 Å for hydrated K(+) ions. These hydrated K(+) estimates harmonize with others obtained with diverse experimental and theoretical methods. Thus, these findings validate MthK and the Kv1.2/2.1 structures as templates for open BK and Kv-channels, respectively.

Opposed-Flow Flame Spread over Thin Solid Fuels in a Narrow Channel under Different Gravity

NASA Astrophysics Data System (ADS)

Zhang, Xia; Yu, Yong; Wan, Shixin; Wei, Minggang; Hu, Wen-Rui

Flame spread over solid surface is critical in combustion science due to its importance in fire safety in both ground and manned spacecraft. Eliminating potential fuels from materials is the basic method to protect spacecraft from fire. The criterion of material screening is its flamma-bility [1]. Since gas flow speed has strong effect on flame spread, the combustion behaviors of materials in normal and microgravity will be different due to their different natural convec-tion. To evaluate the flammability of materials used in the manned spacecraft, tests should be performed under microgravity. Nevertheless, the cost is high, so apparatus to simulate mi-crogravity combustion under normal gravity was developed. The narrow channel is such an apparatus in which the buoyant flow is restricted effectively [2, 3]. The experimental results of the horizontal narrow channel are consistent qualitatively with those of Mir Space Station. Quantitatively, there still are obvious differences. However, the effect of the channel size on flame spread has only attracted little attention, in which concurrent-flow flame spread over thin solid in microgravity is numerically studied[4], while the similarity of flame spread in different gravity is still an open question. In addition, the flame spread experiments under microgravity are generally carried out in large wind tunnels without considering the effects of the tunnel size [5]. Actually, the materials are always used in finite space. Therefore, the flammability given by experiments using large wind tunnels will not correctly predict the flammability of materials in the real environment. In the present paper, the effect of the channel size on opposed-flow flame spread over thin solid fuels in both normal and microgravity was investigated and compared. In the horizontal narrow channel, the flame spread rate increased before decreased as forced flow speed increased. In low speed gas flows, flame spread appeared the same trend as that in microgravity. This showed that the horizontal narrow channel can restrict natural convection effectively. In the vertical narrow channel, flame spread became slower as the forced gas flow speed increased. In low speed gas flows, flame spread was not near quench limit. Instead, the spread rate got its maximum value. This was entirely different from the result of microgravity and showed that the vertical narrow channel can not restrict natural convection. For the horizontal narrow channel, when the channel height lowered to 1 cm (The Grashof number was 149 using the half height as a characteristic length), the natural convection was restricted. For vertical narrow channel, a lower height was needed to restrict natural convection. References 1. NASA Technical Standard, "Flammability, Odor, Offgassing, and Compatibility Require-ments and Test Procedures for Materials in Environments That Support Combustion", NASA STD-6001, 1998. 2. Ivanov, A. V., Balashov, Ye. V., Andreeva, T. V., and et al., "Experimental Verification of Material Flammability in Space", NASA CR-1999-209405, 1999. 3. Melikhov, A. S., Bolodyan, I. A., Potyakin, V. I., and et al., "The study of polymer material combustion in simulated microgravity by physical modeling method", In: Sacksteder K, ed, "Fifth Int Microgravity Comb Workshop", NASA CP-1999-208917, 1999, 361. 4. T'ien, J. S., Shih, H.-Y., Jiang, C.-B., and et al., "Mechanisms of flame spread and smol-der wave propagation", In: Ross, H. D., ed, "Microgravity Combustion: Fire in Free Fall", Academic Press, 2001. 299. 5. Olson, S. L., Comb Sci Tech, 76, 233, 1991.

Investigation of specimen size effects by in-situ microcompression of equal channel angular pressed copper

DOE Office of Scientific and Technical Information (OSTI.GOV)

Howard, C.; Frazer, D.; Lupinacci, A.

Here, micropillar compression testing was implemented on Equal Channel Angular Pressed copper samples ranging from 200 nm to 10 µm in side length in order to measure the mechanical properties yield strength, first load drop during plastic deformation at which there was a subsequent stress decrease with increasing strain, work hardening, and strain hardening exponent. Several micropillars containing multiple grains were investigated in a 200 nm grain sample. The effective pillar diameter to grain size ratios, D/d, were measured to be between 1.9 and 27.2. Specimens having D/d ratios between 0.2 and 5 were investigated in a second sample thatmore » was annealed at 200 °C for 2 h with an average grain size of 1.3 µm. No yield strength or elastic modulus size effects were observed in specimens in the 200 nm grain size sample. However work hardening increases with a decrease in critical ratios and first stress drops occur at much lower stresses for specimens with D/d ratios less than 5. For comparison, bulk tensile testing of both samples was performed, and the yield strength values of all micropillar compression tests for the 200 nm grained sample are in good agreement with the yield strength values of the tensile tests.« less

Investigation of specimen size effects by in-situ microcompression of equal channel angular pressed copper

DOE PAGES

Howard, C.; Frazer, D.; Lupinacci, A.; ...

2015-09-30

Here, micropillar compression testing was implemented on Equal Channel Angular Pressed copper samples ranging from 200 nm to 10 µm in side length in order to measure the mechanical properties yield strength, first load drop during plastic deformation at which there was a subsequent stress decrease with increasing strain, work hardening, and strain hardening exponent. Several micropillars containing multiple grains were investigated in a 200 nm grain sample. The effective pillar diameter to grain size ratios, D/d, were measured to be between 1.9 and 27.2. Specimens having D/d ratios between 0.2 and 5 were investigated in a second sample thatmore » was annealed at 200 °C for 2 h with an average grain size of 1.3 µm. No yield strength or elastic modulus size effects were observed in specimens in the 200 nm grain size sample. However work hardening increases with a decrease in critical ratios and first stress drops occur at much lower stresses for specimens with D/d ratios less than 5. For comparison, bulk tensile testing of both samples was performed, and the yield strength values of all micropillar compression tests for the 200 nm grained sample are in good agreement with the yield strength values of the tensile tests.« less

Effect of nano-scale morphology on micro-channel wall surface and electrical characterization in lead silicate glass micro-channel plate

NASA Astrophysics Data System (ADS)

Cai, Hua; Li, Fangjun; Xu, Yanglei; Bo, Tiezhu; Zhou, Dongzhan; Lian, Jiao; Li, Qing; Cao, Zhenbo; Xu, Tao; Wang, Caili; Liu, Hui; Li, Guoen; Jia, Jinsheng

2017-10-01

Micro-channel plate (MCP) is a two dimensional arrays of microscopic channel charge particle multiplier. Silicate composition and hydrogen reduction are keys to determine surface morphology of micro-channel wall in MCP. In this paper, lead silicate glass micro-channel plates in two different cesium contents (0at%, 0.5at%) and two different hydrogen reduction temperatures (400°C,450°C) were present. The nano-scale morphology, elements content and chemical states of microporous wall surface treated under different alkaline compositions and reduction conditions was investigated by Atomic Force Microscopy (AFM) and X-ray Photoelectron Spectroscopy (XPS), respectively. Meanwhile, the electrical characterizations of MCP, including the bulk resistance, electron gain and the density of dark current, were measured in a Vacuum Photoelectron Imaging Test Facility (VPIT).The results indicated that the granular phase occurred on the surface of microporous wall and diffuses in bulk glass is an aggregate of Pb atom derived from the reduction of Pb2+. In micro-channel plate, the electron gain and bulk resistance were mainly correlated to particle size and distribution, the density of dark current (DDC) went up with the increasing root-mean-square roughness (RMS) on the microporous wall surface. Adding cesiums improved the size of Pb atomic aggregation, lowered the relative concentration of [Pb] reduced from Pb2+ and decreased the total roughness of micro-channel wall surface, leading a higher bulk resistance, a lower electron gain and a less dark current. Increasing hydrogen reduction temperature also improved the size of Pb atomic aggregation, but enhanced the relative concentration of [Pb] and enlarged the total roughness of micro-channel wall surface, leading a higher bulk resistance, a lower electron gain and a larger dark current. The reasons for the difference of electrical characteristics were discussed.

Effect of restricted geometry on the superconducting properties of low-melting metals (Review Article)

NASA Astrophysics Data System (ADS)

Kumzerov, Yu. A.; Naberezhnov, A. A.

2016-11-01

This is a review of results from studies of the effect of artificially restricted geometry (the size effect) on the superconducting properties of nanoparticles of low-melting metals (Hg, Pb, Sn, In). Restricted geometrical conditions are created by embedding molten metals under high pressure into nanoporous matrices of two types: channel structures based on chrysotile asbestos and porous alkali-borosilicate glasses. Chrysotile asbestos is a system of parallel nanotubes with channel diameters ranging from 2 to 20 nm and an aspect ratio (channel length to diameter) of up to 107. The glasses are a random dendritic three-dimensional system of interconnected channels with a technologically controllable mean diameter of 2-30 nm. Temperature dependences of the resistance and heat capacity in the region of the superconducting transition and the dependences of the critical temperature on the mean pore diameter are obtained. The critical magnetic fields are also determined.

Channel Size Conversion of Phi29 DNA-Packaging Nanomotor for Discrimination of Single- and Double-Stranded Nucleic Acids

PubMed Central

Geng, Jia; Wang, Shaoying; Fang, Huaming; Guo, Peixuan

2013-01-01

Nanopores have been utilized to detect the conformation and dynamics of polymers, including DNA and RNA. Biological pores are extremely reproducible at the atomic level with uniform channel sizes. The channel of the bacterial virus phi29 DNA packaging motor is a natural conduit for the transportation of double-stranded DNA (dsDNA), and has the largest diameter among the well-studied biological channels. The larger channel facilitates translocation of dsDNA, and offers more space for further channel modification and conjugation. Interestingly, the relatively large wild type channel, which translocates dsDNA, cannot detect single-stranded nucleic acids (ssDNA or ssRNA) under the current experimental conditions. Herein, we reengineered this motor channel by removing the internal loop segment of the channel. The modification resulted in two classes of channels. One class was the same size as the wild type channel, while the other class had a cross-sectional area about 60% of the wild type. This smaller channel was able to detect the real-time translocation of single stranded nucleic acids at single-molecule level. While the wild type connector exhibited a one-way traffic property with respect to dsDNA translocation, the loop deleted connector was able to translocate ssDNA and ssRNA with equal competencies from both termini. This finding of size alterations in reengineered motor channels expands the potential application of the phi29 DNA packaging motor in nanomedicine, nanobiotechnology, and high-throughput single pore DNA sequencing. PMID:23488809

Analytical template protection performance and maximum key size given a Gaussian-modeled biometric source

NASA Astrophysics Data System (ADS)

Kelkboom, Emile J. C.; Breebaart, Jeroen; Buhan, Ileana; Veldhuis, Raymond N. J.

2010-04-01

Template protection techniques are used within biometric systems in order to protect the stored biometric template against privacy and security threats. A great portion of template protection techniques are based on extracting a key from or binding a key to a biometric sample. The achieved protection depends on the size of the key and its closeness to being random. In the literature it can be observed that there is a large variation on the reported key lengths at similar classification performance of the same template protection system, even when based on the same biometric modality and database. In this work we determine the analytical relationship between the system performance and the theoretical maximum key size given a biometric source modeled by parallel Gaussian channels. We consider the case where the source capacity is evenly distributed across all channels and the channels are independent. We also determine the effect of the parameters such as the source capacity, the number of enrolment and verification samples, and the operating point selection on the maximum key size. We show that a trade-off exists between the privacy protection of the biometric system and its convenience for its users.

Insights in the Diffusion Controlled Interfacial Flow Synthesis of Au Nanostructures in a Microfluidic System.

PubMed

Kulkarni, Amol A; Sebastian Cabeza, Victor

2017-12-19

Continuous segmented flow interfacial synthesis of Au nanostructures is demonstrated in a microchannel reactor. This study brings new insights into the growth of nanostructures at continuous interfaces. The size as well as the shape of the nanostructures showed significant dependence on the reactant concentrations, reaction time, temperature, and surface tension, which actually controlled the interfacial mass transfer. The microchannel reactor assisted in achieving a high interfacial area, as well as uniformity in mass transfer effects. Hexagonal nanostructures were seen to be formed in synthesis times as short as 10 min. The wettability of the channel showed significant effect on the particle size as well as the actual shape. The hydrophobic channel yielded hexagonal structures of relatively smaller size than the hydrophilic microchannel, which yielded sharp hexagonal bipyramidal particles (diagonal distance of 30 nm). The evolution of particle size and shape for the case of hydrophilic microchannel is also shown as a function of the residence time. The interfacial synthesis approach based on a stable segmented flow promoted an excellent control on the reaction extent, reduction in axial dispersion as well as the particle size distribution.

Estimates of the location of L-type Ca2+ channels in motoneurons of different sizes: a computational study.

PubMed

Grande, Giovanbattista; Bui, Tuan V; Rose, P Ken

2007-06-01

In the presence of monoamines, L-type Ca(2+) channels on the dendrites of motoneurons contribute to persistent inward currents (PICs) that can amplify synaptic inputs two- to sixfold. However, the exact location of the L-type Ca(2+) channels is controversial, and the importance of the location as a means of regulating the input-output properties of motoneurons is unknown. In this study, we used a computational strategy developed previously to estimate the dendritic location of the L-type Ca(2+) channels and test the hypothesis that the location of L-type Ca(2+) channels varies as a function of motoneuron size. Compartmental models were constructed based on dendritic trees of five motoneurons that ranged in size from small to large. These models were constrained by known differences in PIC activation reported for low- and high-conductance motoneurons and the relationship between somatic PIC threshold and the presence or absence of tonic excitatory or inhibitory synaptic activity. Our simulations suggest that L-type Ca(2+) channels are concentrated in hotspots whose distance from the soma increases with the size of the dendritic tree. Moving the hotspots away from these sites (e.g., using the hotspot locations from large motoneurons on intermediate-sized motoneurons) fails to replicate the shifts in PIC threshold that occur experimentally during tonic excitatory or inhibitory synaptic activity. In models equipped with a size-dependent distribution of L-type Ca(2+) channels, the amplification of synaptic current by PICs depends on motoneuron size and the location of the synaptic input on the dendritic tree.

Downstream effects of stream flow diversion on channel characteristics and riparian vegetation in the Colorado Rocky Mountains, USA

Treesearch

Simeon T. Caskey; Tyanna S. Blaschak; Ellen Wohl; Elizabeth Schnackenberg; David M. Merritt; Kathleen A. Dwire

2015-01-01

Flow diversions are widespread and numerous throughout the semi-arid mountains of the western United States. Diversions vary greatly in their structure and ability to divert water, but can alter the magnitude and duration of base and peak flows, depending upon their size and management. Channel geometry and riparian plant communities have adapted to unique hydrologic...

Mitigation of hazards from future lahars from Mount Merapi in the Krasak River channel near Yogyakarta, central Java

USGS Publications Warehouse

Ege, John R.; ,

1983-01-01

Procedures for reducing hazards from future lahars and debris flows in the Krasak River channel near Yogyakarta, Central Java, Indonesia, include (1) determining the history of the location, size, and effects of previous lahars and debris flows, and (2) decreasing flow velocities. The first may be accomplished by geologic field mapping along with acquiring information by interviewing local residents, and the second by increasing the cross sectional area of the river channel and constructing barriers in the flow path.

A standardized sampling protocol for channel catfish in prairie streams

USGS Publications Warehouse

Vokoun, Jason C.; Rabeni, Charles F.

2001-01-01

Three alternative gears—an AC electrofishing raft, bankpoles, and a 15-hoop-net set—were used in a standardized manner to sample channel catfish Ictalurus punctatus in three prairie streams of varying size in three seasons. We compared these gears as to time required per sample, size selectivity, mean catch per unit effort (CPUE) among months, mean CPUE within months, effect of fluctuating stream stage, and sensitivity to population size. According to these comparisons, the 15-hoop-net set used during stable water levels in October had the most desirable characteristics. Using our catch data, we estimated the precision of CPUE and size structure by varying sample sizes for the 15-hoop-net set. We recommend that 11–15 repetitions of the 15-hoop-net set be used for most management activities. This standardized basic unit of effort will increase the precision of estimates and allow better comparisons among samples as well as increased confidence in management decisions.

Predominance of sperm motion in corners.

PubMed

Nosrati, Reza; Graham, Percival J; Liu, Qiaozhi; Sinton, David

2016-05-23

Sperm migration through the female tract is crucial to fertilization, but the role of the complex and confined structure of the fallopian tube in sperm guidance remains unknown. Here, by confocal imaging microchannels head-on, we distinguish corner- vs. wall- vs. bulk-swimming bull sperm in confined geometries. Corner-swimming dominates with local areal concentrations as high as 200-fold that of the bulk. The relative degree of corner-swimming is strongest in small channels, decreases with increasing channel size, and plateaus for channels above 200 μm. Corner-swimming remains predominant across the physiologically-relevant range of viscosity and pH. Together, boundary-following sperm account for over 95% of the sperm distribution in small rectangular channels, which is similar to the percentage of wall swimmers in circular channels of similar size. We also demonstrate that wall-swimming sperm travel closer to walls in smaller channels (~100 μm), where the opposite wall is within the hydrodynamic interaction length-scale. The corner accumulation effect is more than the superposition of the influence of two walls, and over 5-fold stronger than that of a single wall. These findings suggest that folds and corners are dominant in sperm migration in the narrow (sub-mm) lumen of the fallopian tube and microchannel-based sperm selection devices.

Predominance of sperm motion in corners

PubMed Central

Nosrati, Reza; Graham, Percival J.; Liu, Qiaozhi; Sinton, David

2016-01-01

Sperm migration through the female tract is crucial to fertilization, but the role of the complex and confined structure of the fallopian tube in sperm guidance remains unknown. Here, by confocal imaging microchannels head-on, we distinguish corner- vs. wall- vs. bulk-swimming bull sperm in confined geometries. Corner-swimming dominates with local areal concentrations as high as 200-fold that of the bulk. The relative degree of corner-swimming is strongest in small channels, decreases with increasing channel size, and plateaus for channels above 200 μm. Corner-swimming remains predominant across the physiologically-relevant range of viscosity and pH. Together, boundary-following sperm account for over 95% of the sperm distribution in small rectangular channels, which is similar to the percentage of wall swimmers in circular channels of similar size. We also demonstrate that wall-swimming sperm travel closer to walls in smaller channels (~100 μm), where the opposite wall is within the hydrodynamic interaction length-scale. The corner accumulation effect is more than the superposition of the influence of two walls, and over 5-fold stronger than that of a single wall. These findings suggest that folds and corners are dominant in sperm migration in the narrow (sub-mm) lumen of the fallopian tube and microchannel-based sperm selection devices. PMID:27211846

Enlargement and contracture of C2-ceramide channels.

PubMed

Siskind, Leah J; Davoody, Amirparviz; Lewin, Naomi; Marshall, Stephanie; Colombini, Marco

2003-09-01

Ceramides are known to play a major regulatory role in apoptosis by inducing cytochrome c release from mitochondria. We have previously reported that ceramide, but not dihydroceramide, forms large and stable channels in phospholipid membranes and outer membranes of isolated mitochondria. C(2)-ceramide channel formation is characterized by conductance increments ranging from <1 to >200 nS. These conductance increments often represent the enlargement and contracture of channels rather than the opening and closure of independent channels. Enlargement is supported by the observation that many small conductance increments can lead to a large decrement. Also the initial conductances favor cations, but this selectivity drops dramatically with increasing total conductance. La(+3) causes rapid ceramide channel disassembly in a manner indicative of large conducting structures. These channels have a propensity to contract by a defined size (often multiples of 4 nS) indicating the formation of cylindrical channels with preferred diameters rather than a continuum of sizes. The results are consistent with ceramides forming barrel-stave channels whose size can change by loss or insertion of multiple ceramide columns.

Enlargement and Contracture of C2-Ceramide Channels

PubMed Central

Siskind, Leah J.; Davoody, Amirparviz; Lewin, Naomi; Marshall, Stephanie; Colombini, Marco

2003-01-01

Ceramides are known to play a major regulatory role in apoptosis by inducing cytochrome c release from mitochondria. We have previously reported that ceramide, but not dihydroceramide, forms large and stable channels in phospholipid membranes and outer membranes of isolated mitochondria. C2-ceramide channel formation is characterized by conductance increments ranging from <1 to >200 nS. These conductance increments often represent the enlargement and contracture of channels rather than the opening and closure of independent channels. Enlargement is supported by the observation that many small conductance increments can lead to a large decrement. Also the initial conductances favor cations, but this selectivity drops dramatically with increasing total conductance. La+3 causes rapid ceramide channel disassembly in a manner indicative of large conducting structures. These channels have a propensity to contract by a defined size (often multiples of 4 nS) indicating the formation of cylindrical channels with preferred diameters rather than a continuum of sizes. The results are consistent with ceramides forming barrel-stave channels whose size can change by loss or insertion of multiple ceramide columns. PMID:12944273

Ion-size dependent electroosmosis of viscoelastic fluids in microfluidic channels with interfacial slip

NASA Astrophysics Data System (ADS)

Mukherjee, Siddhartha; Goswami, Prakash; Dhar, Jayabrata; Dasgupta, Sunando; Chakraborty, Suman

2017-07-01

We report a study on the ion-size dependent electroosmosis of viscoelastic fluids in microfluidic channels with interfacial slip. Here, we derive an analytical solution for the potential distribution in a parallel plate microchannel, where the effects of finite sized ionic species are taken into account by invoking the free energy formalism. Following this, a purely electroosmotic flow of a simplified Phan-Thien-Tanner (sPTT) fluid is considered. For the sPTT model, linear, quadratic, and exponential kernels are chosen for the stress coefficient function describing its viscoelastic nature across various ranges of Deborah number. The theoretical framework presented in our analysis has been successfully compared with experimental results available in the literature. We believe that the implications of the considered effects on the net volumetric throughput will not only provide a deeper theoretical insight to interpret the electrokinetic data in the presence of ionic species but also serve as a fundamental design tool for novel electrokinetically driven lab-on-a-chip biofluidic devices.

Evaluation of in-channel amperometric detection using a dual-channel microchip electrophoresis device and a two-electrode potentiostat for reverse polarity separations

PubMed Central

Meneses, Diogenes; Gunasekara, Dulan B.; Pichetsurnthorn, Pann; da Silva, José A. F.; de Abreu, Fabiane C.; Lunte, Susan M.

2015-01-01

In-channel amperometric detection combined with dual-channel microchip electrophoresis is evaluated using a two-electrode isolated potentiostat for reverse polarity separations. The device consists of two separate channels with the working and reference electrodes placed at identical positions relative to the end of the channel, enabling noise subtraction. In previous reports of this configuration, normal polarity and a three-electrode detection system were used. In the two-electrode detection system described here, the electrode in the reference channel acts as both the counter and reference. The effect of electrode placement in the channels on noise and detector response was investigated using nitrite, tyrosine, and hydrogen peroxide as model compounds. The effects of electrode material and size and type of reference electrode on noise and the potential shift of hydrodynamic voltammograms for the model compounds were determined. In addition, the performance of two- and three-electrode configurations using Pt and Ag/AgCl reference electrodes was compared. Although the signal was attenuated with the Pt reference, the noise was also significantly reduced. It was found that lower LOD were obtained for all three compounds with the dual-channel configuration compared to single-channel, in-channel detection. The dual-channel method was then used for the detection of nitrite in a dermal microdialysis sample obtained from a sheep following nitroglycerin administration. PMID:25256669

Study of droplet flow in a T-shape microchannel with bottom wall fluctuation

NASA Astrophysics Data System (ADS)

Pang, Yan; Wang, Xiang; Liu, Zhaomiao

2018-03-01

Droplet generation in a T-shape microchannel, with a main channel width of 50 μm , side channel width of 25 μm, and height of 50 μm, is simulated to study the effects of the forced fluctuation of the bottom wall. The periodic fluctuations of the bottom wall are applied on the near junction part of the main channel in the T-shape microchannel. Effects of bottom wall's shape, fluctuation periods, and amplitudes on the droplet generation are covered in the research of this protocol. In the simulation, the average size is affected a little by the fluctuations, but significantly by the fixed shape of the deformed bottom wall, while the droplet size range is expanded by the fluctuations under most of the conditions. Droplet sizes are distributed in a periodic pattern with small amplitude along the relative time when the fluctuation is forced on the bottom wall near the T-junction, while the droplet emerging frequency is not varied by the fluctuation. The droplet velocity is varied by the bottom wall motion, especially under the shorter period and the larger amplitude. When the fluctuation period is similar to the droplet emerging period, the droplet size is as stable as the non-fluctuation case after a development stage at the beginning of flow, while the droplet velocity is varied by the moving wall with the scope up to 80% of the average velocity under the conditions of this investigation.

[Effects of carrier liquid and flow rate on the separation in gravitational field-flow fractionation].

PubMed

Guo, Shuang; Zhu, Chenqi; Gao-Yang, Yaya; Qiu, Bailing; Wu, Di; Liang, Qihui; He, Jiayuan; Han, Nanyin

2016-02-01

Gravitational field-flow fractionation is the simplest field-flow fractionation technique in terms of principle and operation. The earth' s gravity is its external field. Different sized particles are injected into a thin channel and carried by carrier fluid. The different velocities of the carrier liquid in different places results in a size-based separation. A gravitational field-flow fractionation (GrFFF) instrument was designed and constructed. Two kinds of polystyrene (PS) particles with different sizes (20 µm and 6 µm) were chosen as model particles. In this work, the separation of the sample was achieved by changing the concentration of NaN3, the percentage of mixed surfactant in the carrier liquid and the flow rate of carrier liquid. Six levels were set for each factor. The effects of these three factors on the retention ratio (R) and plate height (H) of the PS particles were investigated. It was found that R increased and H decreased with increasing particle size. On the other hand, the R and H increased with increasing flow rate. The R and H also increased with increasing NaN3 concentration. The reason was that the electrostatic repulsive force between the particles and the glass channel wall increased. The force allowed the samples approach closer to the channel wall. The results showed that the resolution and retention time can be improved by adjusting the experimental conditions. These results can provide important values to the further applications of GrFFF technique.

Effective pore size and radius of capture for K+ ions in K-channels

PubMed Central

Moldenhauer, Hans; Díaz-Franulic, Ignacio; González-Nilo, Fernando; Naranjo, David

2016-01-01

Reconciling protein functional data with crystal structure is arduous because rare conformations or crystallization artifacts occur. Here we present a tool to validate the dimensions of open pore structures of potassium-selective ion channels. We used freely available algorithms to calculate the molecular contour of the pore to determine the effective internal pore radius (rE) in several K-channel crystal structures. rE was operationally defined as the radius of the biggest sphere able to enter the pore from the cytosolic side. We obtained consistent rE estimates for MthK and Kv1.2/2.1 structures, with rE = 5.3–5.9 Å and rE = 4.5–5.2 Å, respectively. We compared these structural estimates with functional assessments of the internal mouth radii of capture (rC) for two electrophysiological counterparts, the large conductance calcium activated K-channel (rC = 2.2 Å) and the Shaker Kv-channel (rC = 0.8 Å), for MthK and Kv1.2/2.1 structures, respectively. Calculating the difference between rE and rC, produced consistent size radii of 3.1–3.7 Å and 3.6–4.4 Å for hydrated K+ ions. These hydrated K+ estimates harmonize with others obtained with diverse experimental and theoretical methods. Thus, these findings validate MthK and the Kv1.2/2.1 structures as templates for open BK and Kv-channels, respectively. PMID:26831782

Effects of WDRC release time and number of channels on output SNR and speech recognition

PubMed Central

Alexander, Joshua M.; Masterson, Katie

2014-01-01

Objectives The purpose of this study was to investigate the joint effects that wide dynamic range compression (WDRC) release time (RT) and number of channels have on recognition of sentences in the presence of steady and modulated maskers at different signal-to-noise ratios (SNRs). How the different combinations of WDRC parameters affect output SNR and the role this plays in the observed findings was also investigated. Design Twenty-four listeners with mild to moderate sensorineural hearing loss identified sentences mixed with steady or modulated maskers at 3 SNRs (−5, 0, +5 dB) that had been processed using a hearing aid simulator with 6 combinations of RT (40 and 640 ms) and number of channels (4, 8, and 16). Compression parameters were set using the Desired Sensation Level v5.0a prescriptive fitting method. For each condition, amplified speech and masker levels and the resultant long-term output SNR were measured. Results Speech recognition with WDRC depended on the combination of RT and number of channels, with the greatest effects observed at 0 dB input SNR, in which mean speech recognition scores varied by 10–12% across WDRC manipulations. Overall, effect sizes were generally small. Across both masker types and the three SNRs tested, the best speech recognition was obtained with 8 channels, regardless of RT. Increased speech levels, which favor audibility, were associated with the short RT and with an increase in the number of channels. These same conditions also increased masker levels by an even greater amount, for a net decrease in the long-term output SNR. Changes in long-term SNR across WDRC conditions were found to be strongly associated with changes in the temporal envelope shape as quantified by the Envelope Difference Index, however, neither of these factors fully explained the observed differences in speech recognition. Conclusions A primary finding of this study was that the number of channels had a modest effect when analyzed at each level of RT, with results suggesting that selecting 8 channels for a given RT might be the safest choice. Effects were smaller for RT, with results suggesting that short RT was slightly better when only 4 channels were used and that long RT was better when 16 channels were used. Individual differences in how listeners were influenced by audibility, output SNR, temporal distortion, and spectral distortion may have contributed to the size of the effects found in this study. Because only general suppositions could made for how each of these factors may have influenced the overall results of this study, future research would benefit from exploring the predictive value of these and other factors in selecting the processing parameters that maximize speech recognition for individuals. PMID:25470368

User's Guide for Mixed-Size Sediment Transport Model for Networks of One-Dimensional Open Channels

USGS Publications Warehouse

Bennett, James P.

2001-01-01

This user's guide describes a mathematical model for predicting the transport of mixed sizes of sediment by flow in networks of one-dimensional open channels. The simulation package is useful for general sediment routing problems, prediction of erosion and deposition following dam removal, and scour in channels at road embankment crossings or other artificial structures. The model treats input hydrographs as stepwise steady-state, and the flow computation algorithm automatically switches between sub- and supercritical flow as dictated by channel geometry and discharge. A variety of boundary conditions including weirs and rating curves may be applied both external and internal to the flow network. The model may be used to compute flow around islands and through multiple openings in embankments, but the network must be 'simple' in the sense that the flow directions in all channels can be specified before simulation commences. The location and shape of channel banks are user specified, and all bedelevation changes take place between these banks and above a user-specified bedrock elevation. Computation of sediment-transport emphasizes the sand-size range (0.0625-2.0 millimeter) but the user may select any desired range of particle diameters including silt and finer (<0.0625 millimeter). As part of data input, the user may set the original bed-sediment composition of any number of layers of known thickness. The model computes the time evolution of total transport and the size composition of bed- and suspended-load sand through any cross section of interest. It also tracks bed -surface elevation and size composition. The model is written in the FORTRAN programming language for implementation on personal computers using the WINDOWS operating system and, along with certain graphical output display capability, is accessed from a graphical user interface (GUI). The GUI provides a framework for selecting input files and parameters of a number of components of the sediment-transport process. There are no restrictions in the use of the model as to numbers of channels, channel junctions, cross sections per channel, or points defining the cross sections. Following completion of the simulation computations, the GUI accommodates display of longitudinal plots of either bed elevation and size composition, or of transport rate and size composition of the various components, for individual channels and selected times during the simulation period. For individual cross sections, the GUI also allows display of time series of transport rate and size composition of the various components and of bed elevation and size composition.

Experimental study on pore structure and performance of sintered porous wick

NASA Astrophysics Data System (ADS)

He, Da; Wang, Shufan; Liu, Rutie; Wang, Zhubo; Xiong, Xiang; Zou, Jianpeng

2018-02-01

Porous wicks were prepared via powder metallurgy using NH4HCO3 powders as pore-forming agent. The pore-forming agent particle size was varied to control the pore structure and equivalent pore size distribution feature of porous wick. The effect of pore-forming agent particle size on the porosity, pore structures, equivalent pore size distribution and capillary pumping performance were investigated. Results show that with the particle size of pore-forming agent decrease, the green density and the volume shrinkage of the porous wicks gradually increase and the porosity reduces slightly. There are two types of pores inside the porous wick, large-sized prefabricated pores and small-sized gap pores. With the particle size of pore-forming agent decrease, the size of the prefabricated pores becomes smaller and the distribution tends to be uniform. Gap pores and prefabricated pores inside the wick can make up different types of pore channels. The equivalent pore size of wick is closely related to the structure of pore channels. Furthermore, the equivalent pore size distribution of wick shows an obvious double-peak feature when the pore-forming agent particle size is large. With the particle size of pore-forming agent decrease, the two peaks of equivalent pore size distribution approach gradually to each other, resulting in a single-peak feature. Porous wick with single-peak feature equivalent pore size distribution possesses the better capillary pumping performances.

Dual circuit embossed sheet heat transfer panel

DOEpatents

Morgan, G.D.

1984-02-21

A heat transfer panel provides redundant cooling for fusion reactors or the like environment requiring low-mass construction. Redundant cooling is provided by two independent cooling circuits, each circuit consisting of a series of channels joined to inlet and outlet headers. The panel comprises a welded joinder of two full-size and two much smaller partial-size sheets. The first full-size sheet is embossed to form first portions of channels for the first and second circuits, as well as a header for the first circuit. The second full-sized sheet is then laid over and welded to the first full-size sheet. The first and second partial-size sheets are then overlaid on separate portions of the second full-sized sheet, and are welded thereto. The first and second partial-sized sheets are embossed to form inlet and outlet headers, which communicate with channels of the second circuit through apertures formed in the second full-sized sheet. 6 figs.

Dual-circuit embossed-sheet heat-transfer panel

DOEpatents

Morgan, G.D.

1982-08-23

A heat transfer panel provides redundant cooling for fusion reactors or the like environment requiring low-mass construction. Redundant cooling is provided by two independent cooling circuits, each circuit consisting of a series of channels joined to inlet and outlet headers. The panel comprises a welded joinder of two full-size and two much smaller partial-size sheets. The first full-size sheet is embossed for form first portions of channels for the first and second circuits, as well as a header for the first circuit. The second full-sized sheet is then laid over and welded to the first full-size sheet. The first and second partial-size sheets are then overlaid on separate portions of the second full-sized sheet, and are welded thereto. The first and second partial-sized sheets are embossed to form inlet and outlet headers, which communicate with channels of the second circuit through apertures formed in the second full-sized sheet.

Dual circuit embossed sheet heat transfer panel

DOEpatents

Morgan, Grover D.

1984-01-01

A heat transfer panel provides redundant cooling for fusion reactors or the like environment requiring low-mass construction. Redundant cooling is provided by two independent cooling circuits, each circuit consisting of a series of channels joined to inlet and outlet headers. The panel comprises a welded joinder of two full-size and two much smaller partial-size sheets. The first full-size sheet is embossed to form first portions of channels for the first and second circuits, as well as a header for the first circuit. The second full-sized sheet is then laid over and welded to the first full-size sheet. The first and second partial-size sheets are then overlaid on separate portions of the second full-sized sheet, and are welded thereto. The first and second partial-sized sheets are embossed to form inlet and outlet headers, which communicate with channels of the second circuit through apertures formed in the second full-sized sheet.

Skyrmion-based multi-channel racetrack

NASA Astrophysics Data System (ADS)

Song, Chengkun; Jin, Chendong; Wang, Jinshuai; Xia, Haiyan; Wang, Jianbo; Liu, Qingfang

2017-11-01

Magnetic skyrmions are promising for the application of racetrack memories, logic gates, and other nano-devices, owing to their topologically protected stability, small size, and low driving current. In this work, we propose a skyrmion-based multi-channel racetrack memory where the skyrmion moves in the selected channel by applying voltage-controlled magnetic anisotropy gates. It is demonstrated numerically that a current-dependent skyrmion Hall effect can be restrained by the additional potential of the voltage-controlled region, and the skyrmion velocity and moving channel in the racetrack can be operated by tuning the voltage-controlled magnetic anisotropy, gate position, and current density. Our results offer a potential application of racetrack memory based on skyrmions.

Simulation of cooling efficiency via miniaturised channels in multilayer LTCC for power electronics

NASA Astrophysics Data System (ADS)

Pietrikova, Alena; Girasek, Tomas; Lukacs, Peter; Welker, Tilo; Müller, Jens

2017-03-01

The aim of this paper is detailed investigation of thermal resistance, flow analysis and distribution of coolant as well as thermal distribution inside multilayer LTCC substrates with embedded channels for power electronic devices by simulation software. For this reason four various structures of internal channels in the multilayer LTCC substrates were designed and simulated. The impact of the volume flow, structures of channels, and power loss of chip was simulated, calculated and analyzed by using the simulation software Mentor Graphics FloEFDTM. The structure, size and location of channels have the significant impact on thermal resistance, pressure of coolant as well as the effectivity of cooling power components (chips) that can be placed on the top of LTCC substrate. The main contribution of this paper is thermal analyze, optimization and impact of 4 various cooling channels embedded in LTCC multilayer structure. Paper investigate, the effect of volume flow in cooling channels for achieving the least thermal resistance of LTCC substrate that is loaded by power thermal chips. Paper shows on the impact of the first chips thermal load on the second chip as well as. This possible new technology could ensure in the case of practical realization effective cooling and increasing reliability of high power modules.

Laser pulse propagation in inhomogeneous magnetoplasma channels and wakefield acceleration

NASA Astrophysics Data System (ADS)

Sharma, B. S.; Jain, Archana; Jaiman, N. K.; Gupta, D. N.; Jang, D. G.; Suk, H.; Kulagin, V. V.

2014-02-01

Wakefield excitation in a preformed inhomogeneous parabolic plasma channel by an intense relativistic (≃1019 W/cm2) circularly polarized Gaussian laser pulse is investigated analytically and numerically in the presence of an external longitudinal magnetic field. A three dimensional envelope equation for the evolution of the laser pulse is derived, which includes the effect of the nonparaxial and applied external magnetic field. A relation for the channel radius with the laser spot size is derived and examines numerically to see the external magnetic field effect. It is observed that the channel radius depends on the applied external magnetic field. An analytical expression for the wakefield is derived and validated with the help of a two dimensional particle in cell (2D PIC) simulation code. It is shown that the electromagnetic nature of the wakes in an inhomogeneous plasma channel makes their excitation nonlocal, which results in change of fields with time and external magnetic field due to phase mixing of the plasma oscillations with spatially varying frequencies. The magnetic field effect on perturbation of the plasma density and decreasing length is also analyzed numerically. In addition, it has been shown that the electron energy gain in the inhomogeneous parabolic magnetoplasma channel can be increased significantly compared with the homogeneous plasma channel.

Effects of structural parameters on fluid flow and mixing performance in a curved microchannel with gaps and baffles

NASA Astrophysics Data System (ADS)

Li, Jian; Xia, Guodong; Li, Yifan; Tian, Xinping

2013-07-01

We provide three-dimensional numerical simulations of mixing performance in a newly proposed micromixer with different structural parameters. The same amount of gaps and baffles are arranged along the curved channel within a certain distance. The effects of their structural parameters on mixing efficiency are presented, which include either the position and feature size of gaps and baffles, or the curvature radius of curved channel. The high efficiency mixing mechanism of the curved channel with gaps and baffles can attribute to the interaction of the increased contact area for premixed liquids, the jet and throttling effect over every unit of gap and baffle, the developing of the multidirectional vortices along the curved channel. The mixing index is sensitive to the width of the gaps and baffles for some Reynolds number ranges, but is not sensitive to the curvature radius of the curved channel. The characteristic of the pressure drop depending on Reynolds number is also investigated in order to keep an appropriate balance with mixing property.

Sedimentation of a sphere in a fluid channel

NASA Astrophysics Data System (ADS)

Pitois, Olivier; Fritz, Christelle; Pasol, Laurentiu; Vignes-Adler, Michèle

2009-10-01

We studied both experimentally and numerically the sedimentation velocity of small solid particles through liquid channels merging at the intersection of three soap films. The wall mobility induces a nontrivial behavior for the particle drag coefficient, providing particular transport properties that are not observed for channels with rigid walls. It is shown that for sufficiently small particles, slow and fast motions are observed for the particle along the channel, depending on the particle position within the channel cross section and the sphere/channel size ratio. The velocity corresponding to fast motions can be as high as twice the Stokes velocity in an unbounded fluid. Moreover, the fast motions are not observed anymore when the size ratio exceeds a critical value, which has been found to be approximately equal to 0.5. As another major difference with the solid wall channel, the sphere velocity does not vanish when the size ratio reaches unity. Instead, the smallest value is found to be 1/4 of the Stokes velocity.

Migration of finite sized particles in a laminar square channel flow from low to high Reynolds numbers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abbas, M., E-mail: micheline.abbas@ensiacet.fr; CNRS, Fédération de recherche FERMaT, CNRS, 31400, Toulouse; Magaud, P.

2014-12-15

The migration of neutrally buoyant finite sized particles in a Newtonian square channel flow is investigated in the limit of very low solid volumetric concentration, within a wide range of channel Reynolds numbers Re = [0.07-120]. In situ microscope measurements of particle distributions, taken far from the channel inlet (at a distance several thousand times the channel height), revealed that particles are preferentially located near the channel walls at Re > 10 and near the channel center at Re < 1. Whereas the cross-streamline particle motion is governed by inertia-induced lift forces at high inertia, it seems to be controlledmore » by shear-induced particle interactions at low (but finite) Reynolds numbers, despite the low solid volume fraction (<1%). The transition between both regimes is observed in the range Re = [1-10]. In order to exclude the effect of multi-body interactions, the trajectories of single freely moving particles are calculated thanks to numerical simulations based on the force coupling method. With the deployed numerical tool, the complete particle trajectories are accessible within a reasonable computational time only in the inertial regime (Re > 10). In this regime, we show that (i) the particle undergoes cross-streamline migration followed by a cross-lateral migration (parallel to the wall) in agreement with previous observations, and (ii) the stable equilibrium positions are located at the midline of the channel faces while the diagonal equilibrium positions are unstable. At low flow inertia, the first instants of the numerical simulations (carried at Re = O(1)) reveal that the cross-streamline migration of a single particle is oriented towards the channel wall, suggesting that the particle preferential positions around the channel center, observed in the experiments, are rather due to multi-body interactions.« less

Meson and baryon spectrum for QCD with two light dynamical quarks

NASA Astrophysics Data System (ADS)

Engel, Georg P.; Lang, C. B.; Limmer, Markus; Mohler, Daniel; Schäfer, Andreas

2010-08-01

We present results of meson and baryon spectroscopy using the Chirally Improved Dirac operator on lattices of size 163×32 with two mass-degenerate light sea quarks. Three ensembles with pion masses of 322(5), 470(4), and 525(7) MeV and lattice spacings close to 0.15 fm are investigated. Results for ground and excited states for several channels are given, including spin two mesons and hadrons with strange valence quarks. The analysis of the states is done with the variational method, including two kinds of Gaussian sources and derivative sources. We obtain several ground states fairly precisely and find radial excitations in various channels. Excited baryon results seem to suffer from finite size effects, in particular, at small pion masses. We discuss the possible appearance of scattering states, considering masses and eigenvectors. Partially quenched results in the scalar channel suggest the presence of a 2-particle state, however, in most channels we cannot identify them. Where available, we compare our results to results of quenched simulations using the same action.

A DC electrophoresis method for determining electrophoretic mobility through the pressure driven negation of electro osmosis

NASA Astrophysics Data System (ADS)

Karam, Pascal; Pennathur, Sumita

2016-11-01

Characterization of the electrophoretic mobility and zeta potential of micro and nanoparticles is important for assessing properties such as stability, charge and size. In electrophoretic techniques for such characterization, the bulk fluid motion due to the interaction between the fluid and the charged surface must be accounted for. Unlike current industrial systems which rely on DLS and oscillating potentials to mitigate electroosmotic flow (EOF), we propose a simple alternative electrophoretic method for optically determining electrophoretic mobility using a DC electric fields. Specifically, we create a system where an adverse pressure gradient counters EOF, and design the geometry of the channel so that the flow profile of the pressure driven flow matches that of the EOF in large regions of the channel (ie. where we observe particle flow). Our specific COMSOL-optimized geometry is two large cross sectional areas adjacent to a central, high aspect ratio channel. We show that this effectively removes EOF from a large region of the channel and allows for the accurate optical characterization of electrophoretic particle mobility, no matter the wall charge or particle size.

Improving the spatial accuracy in functional magnetic resonance imaging (fMRI) based on the blood oxygenation level dependent (BOLD) effect: benefits from parallel imaging and a 32-channel head array coil at 1.5 Tesla.

PubMed

Fellner, C; Doenitz, C; Finkenzeller, T; Jung, E M; Rennert, J; Schlaier, J

2009-01-01

Geometric distortions and low spatial resolution are current limitations in functional magnetic resonance imaging (fMRI). The aim of this study was to evaluate if application of parallel imaging or significant reduction of voxel size in combination with a new 32-channel head array coil can reduce those drawbacks at 1.5 T for a simple hand motor task. Therefore, maximum t-values (tmax) in different regions of activation, time-dependent signal-to-noise ratios (SNR(t)) as well as distortions within the precentral gyrus were evaluated. Comparing fMRI with and without parallel imaging in 17 healthy subjects revealed significantly reduced geometric distortions in anterior-posterior direction. Using parallel imaging, tmax only showed a mild reduction (7-11%) although SNR(t) was significantly diminished (25%). In 7 healthy subjects high-resolution (2 x 2 x 2 mm3) fMRI was compared with standard fMRI (3 x 3 x 3 mm3) in a 32-channel coil and with high-resolution fMRI in a 12-channel coil. The new coil yielded a clear improvement for tmax (21-32%) and SNR(t) (51%) in comparison with the 12-channel coil. Geometric distortions were smaller due to the smaller voxel size. Therefore, the reduction in tmax (8-16%) and SNR(t) (52%) in the high-resolution experiment seems to be tolerable with this coil. In conclusion, parallel imaging is an alternative to reduce geometric distortions in fMRI at 1.5 T. Using a 32-channel coil, reduction of the voxel size might be the preferable way to improve spatial accuracy.

Vertical mass transfer in open channel flow

USGS Publications Warehouse

Jobson, Harvey E.

1968-01-01

The vertical mass transfer coefficient and particle fall velocity were determined in an open channel shear flow. Three dispersants, dye, fine sand and medium sand, were used with each of three flow conditions. The dispersant was injected as a continuous line source across the channel and downstream concentration profiles were measured. From these profiles along with the measured velocity distribution both the vertical mass transfer coefficient and the local particle fall velocity were determined.The effects of secondary currents on the vertical mixing process were discussed. Data was taken and analyzed in such a way as to largely eliminate the effects of these currents on the measured values. A procedure was developed by which the local value of the fall velocity of sand sized particles could be determined in an open channel flow. The fall velocity of the particles in the turbulent flow was always greater than their fall velocity in quiescent water. Reynolds analogy between the transfer of momentum and marked fluid particles was further substantiated. The turbulent Schmidt number was shown to be approximately 1.03 for an open channel flow with a rough boundary. Eulerian turbulence measurements were not sufficient to predict the vertical transfer coefficient. Vertical mixing of sediment is due to three semi-independent processes. These processes are: secondary currents, diffusion due to tangential velocity fluctuations and diffusion due to the curvature of the fluid particle path lines. The diffusion coefficient due to tangential velocity fluctuations is approximately proportional to the transfer coefficient of marked fluid particles. The proportionality constant is less than or equal to 1.0 and decreases with increasing particle size. The diffusion coefficient due to the curvature of the fluid particle path lines is not related to the diffusion coefficient for marked fluid particles and increases with particle size, at least for sediment particles in the sand size range. The total sediment transfer coefficient is equal to the sum of the coefficient due to tangential velocity fluctuations and the coefficient due to the curvature of the fluid particle path lines. A numerical solution to the conservation of mass equation is given. The effects of the transfer coefficient, fall velocity and bed conditions on the predicted concentration profiles are illustrated.

Extraction channel design based on an equivalent lumped parameter method for a SCC-250 MeV superconducting cyclotron

NASA Astrophysics Data System (ADS)

Zhang, Lige; Fan, Kuanjun; Hu, Shengwei; Li, Xiaofei; Mei, Zhiyuan; Zeng, Zhijie; Chen, Wei; Qin, Bin; Rao, Yinong

2018-07-01

A SCC-250 MeV cyclotron, producing a 250 MeV proton beam, is under development in Huazhong University of Science and Technology (HUST) for proton therapy. The magnetic flux density, as a function of radius, decreases rapidly in the beam extraction region, which increases the radial beam size continuously along the extraction orbit. In this paper, an extraction channel inside the SCC-250 MeV is designed to control the beam size using passive magnetic channels. An equivalent lumped parameter method is used to establish the model of the extraction channel in the complex fringe magnetic field of the main magnet. Then, the extraction channel is designed using the lattice design software MADX. The beam envelopes are verified using particle tracing method. The maximum radial size of 6.8 mm and axial size of 4.3 mm meet the requirements of the extraction from the SCC-250 MeV.

Particle size distribution of main-channel-bed sediments along the upper Mississippi River, USA

USGS Publications Warehouse

Remo, Jonathan; Heine, Ruben A.; Ickes, Brian

2016-01-01

In this study, we compared pre-lock-and-dam (ca. 1925) with a modern longitudinal survey of main-channel-bed sediments along a 740-km segment of the upper Mississippi River (UMR) between Davenport, IA, and Cairo, IL. This comparison was undertaken to gain a better understanding of how bed sediments are distributed longitudinally and to assess change since the completion of the UMR lock and dam navigation system and Missouri River dams (i.e., mid-twentieth century). The comparison of the historic and modern longitudinal bed sediment surveys showed similar bed sediment sizes and distributions along the study segment with the majority (> 90%) of bed sediment samples having a median diameter (D50) of fine to coarse sand. The fine tail (≤ D10) of the sediment size distributions was very fine to medium sand, and the coarse tail (≥ D90) of sediment-size distribution was coarse sand to gravel. Coarsest sediments in both surveys were found within or immediately downstream of bedrock-floored reaches. Statistical analysis revealed that the particle-size distributions between the survey samples were statistically identical, suggesting no overall difference in main-channel-bed sediment-size distribution between 1925 and present. This was a surprising result given the magnitude of river engineering undertaken along the study segment over the past ~ 90 years. The absence of substantial differences in main-channel-bed-sediment size suggests that flow competencies within the highly engineered navigation channel today are similar to conditions within the less-engineered historic channel.

QUANTIFYING STREAM STRUCTURAL PHYSICAL HABITAT ATTRIBUTES USING LIDAR AND HYPERSPECTRAL IMAGERY

EPA Science Inventory

Structural physical habitat attributes include indices of stream size, channel gradient, substrate size, habitat complexity and cover, riparian vegetation cover and structure, anthropogenic disturbances and channel-riparian interaction.

Total ionizing dose effect in an input/output device for flash memory

NASA Astrophysics Data System (ADS)

Liu, Zhang-Li; Hu, Zhi-Yuan; Zhang, Zheng-Xuan; Shao, Hua; Chen, Ming; Bi, Da-Wei; Ning, Bing-Xu; Zou, Shi-Chang

2011-12-01

Input/output devices for flash memory are exposed to gamma ray irradiation. Total ionizing dose has been shown great influence on characteristic degradation of transistors with different sizes. In this paper, we observed a larger increase of off-state leakage in the short channel device than in long one. However, a larger threshold voltage shift is observed for the narrow width device than for the wide one, which is well known as the radiation induced narrow channel effect. The radiation induced charge in the shallow trench isolation oxide influences the electric field of the narrow channel device. Also, the drain bias dependence of the off-state leakage after irradiation is observed, which is called the radiation enhanced drain induced barrier lowing effect. Finally, we found that substrate bias voltage can suppress the off-state leakage, while leading to more obvious hump effect.

Semi-preparative asymmetrical flow field-flow fractionation: A closer look at channel dimensions and separation performance.

PubMed

Bria, Carmen R M; Skelly, Patrick W; Morse, James R; Schaak, Raymond E; Williams, S Kim Ratanathanawongs

2017-05-26

The design and performance of a semi-preparative asymmetrical flow field-flow fractionation (SP-AF4) channel are investigated with the objective of better understanding and exploiting the relationship between channel dimensions, sample loading, and resolution. Most size-based separations of nanometer and submicrometer particles are currently limited to analytical scale quantities (<100μg). However, there is a strong need to fractionate and collect larger quantities so that fundamental properties of the more narrowly dispersed fractions can be studied using additional characterization methods and for subsequent applications. In this work, dimensions of the spacer that defines the form of SP-AF4 channels are varied and their performances are assessed with respect to sample focusing position and loading. Separations are performed in aqueous and organic carrier fluids. A critical evaluation of channel dimensions showed that increasing the channel breadth is a practical and effective route to maintaining separation resolution while increasing sample loads to milligram quantities. Good size resolution (∼1.0) is achieved for separations of 10mg of 50 and 100nm silica nanoparticles suspended in water and up to 0.6mg of ∼10 to 35nm inorganic hybrid nanoparticles suspended in tetrahydrofuran. This work represents important advances in the understanding of SP-AF4 separations and extends sample loading capacities in both aqueous and organic solvents. Copyright © 2017 Elsevier B.V. All rights reserved.

Inflammatory mediator bradykinin increases population of sensory neurons expressing functional T-type Ca2+ channels

PubMed Central

Huang, Dongyang; Liang, Ce; Zhang, Fan; Men, Hongchao; Du, Xiaona; Gamper, Nikita; Zhang, Hailin

2016-01-01

T-type Ca2+ channels are important regulators of peripheral sensory neuron excitability. Accordingly, T-type Ca2+ currents are often increased in various pathological pain conditions, such as inflammation or nerve injury. Here we investigated effects of inflammation on functional expression of T-type Ca2+ channels in small-diameter cultured dorsal root ganglion (DRG) neurons. We found that overnight treatment of DRG cultures with a cocktail of inflammatory mediators bradykinin (BK), adenosine triphosphate (ATP), norepinephrine (NE) and prostaglandin E2 (PGE2) strongly increased the population size of the small-diameter neurons displaying low-voltage activated (LVA, T-type) Ca2+ currents while having no effect on the peak LVA current amplitude. When applied individually, BK and ATP also increased the population size of LVA-positive neurons while NE and PGE2 had no effect. The PLC inhibitor U-73122 and B2 receptor antagonist, Hoe-140, both abolished the increase of the population of LVA-positive DRG neurons. Inflammatory treatment did not affect CaV3.2 mRNA or protein levels in DRG cultures. Furthermore, an ubiquitination inhibitor, MG132, did not increase the population of LVA-positive neurons. Our data suggest that inflammatory mediators BK and ATP increase the abundance of LVA-positive DRG neurons in total neuronal population by stimulating the recruitment of a ‘reserve pool’ of CaV3.2 channels, particularly in neurons that do not display measurable LVA currents under control conditions. PMID:26944020

Grain size indicators of sedimentary coupling between hillslopes and channels in a dryland basin

NASA Astrophysics Data System (ADS)

Hollings, Rory; Michealides, Katerina; Bliss Singer, Michael

2017-04-01

In dryland landscapes, heterogeneous and short-lived rainstorms generate runoff on slopes and streamflow in channels, which drive sediment movement from hillslope surfaces to channels and the transport of bed material sediment within channels. Long-term topographic evolution of drainage basins is partly determined by the relative balance of hillslope sediment supply to channels and the evacuation of channel sediment. However, it is not clear whether supply or evacuation is dominant over longer timescales (>>100 y) within dryland basins. One important indicator of local cumulative sediment transport is grain size (GS). On dryland hillslopes, grain size is governed over long timescales by weathering, but on short time scales (events to decades), is controlled by event-driven transport of the debris mantle. In the channel, GS reflects the input of hillslope sediment and the selective transport of particles along the bed. It is currently unknown how these two processes are expressed systematically within GS distributions on slopes and in channels within drylands, but this information could be useful to explain the history of the relative balance between hillslope sediment supply to channels and net sediment transport in the channel. We investigate this problem by combining field measurements of surface sediment grain size distributions in channels and on hillslopes with 1m LiDAR topography, >60 years of rainfall and channel discharge data from the Walnut Gulch Experimental Watershed (WGEW) in Arizona, and simple calculations of grain-sized based local stress distributions for various rainfall and discharge events. Hydrological scenarios of overland flow on hillslopes and channel flow conditions were derived from distributions of historic data at WGEW and were selected to reflect the wide range of storm intensities and durations, and channel discharges. 1) We used three quartiles of the entire distribution of measured discharge values for 80 locations throughout the channel network to represent low, medium and high flows. 2) For rainfall we used three quartiles of the entire distribution of measured rainfall intensity and duration from 85 rain gauges spanning the basin, to derive low, medium and high rainfall durations. We then calculated the corresponding rainfall intensities based on four intensity-duration curves that were characteristic of different parts of the phase space of the measured data-points. 3) The derived rainfall intensities and durations were converted into hillslope overland flow using Coup2D (a hillslope rainfall-runoff model) for 44 hillslopes within WGEW for which we have GS and topographic data. We employ the median grain size (D50) to compare stress metrics on hillslopes and in channel for each location. Typically, low-order streams experience greater influxes of hillslope derived sediment than is evacuated by the channel. However, the main channel stem is characterised by sediment removal in most scenarios including low discharge, long duration rainfall, suggesting most hillslope supplied sediment is balanced by channel evacuation. Near tributary junctions, and close to the mouth of the basin there are fluctuations in net balance of sediment transport from evacuation- to supply-dominance for different scenarios. These fluctuations could influence channel bed GS distribution and longitudinal profile development.

Simulations of the effects of water vapor, cloud liquid water, and ice on AMSU moisture channel brightness temperatures

NASA Technical Reports Server (NTRS)

Muller, Bradley M.; Fuelberg, Henry E.; Xiang, Xuwu

1994-01-01

Radiative transfer simulations are performed to determine how water vapor and nonprecipitating cloud liquid water and ice particles within typical midlatitude atmospheres affect brightness temperatures T(sub B)'s of moisture sounding channels used in the Advanced Microwave Sounding Unit (AMSU) and AMSU-like instruments. The purpose is to promote a general understanding of passive top-of-atmosphere T(sub B)'s for window frequencies at 23.8, 89.0, and 157.0 GHz, and water vapor frequencies at 176.31, 180.31, and 182.31 GHz by documenting specific examples. This is accomplished through detailed analyses of T(sub B)'s for idealized atmospheres, mostly representing temperate conditions over land. Cloud effects are considered in terms of five basic properties: droplet size distribution, phase, liquid or ice water content, altitude, and thickness. Effects on T(sub B) of changing surface emissivity also are addressed. The brightness temperature contribution functions are presented as an aid to physically interpreting AMSU T(sub B)'s. Both liquid and ice clouds impact the T(sub B)'s in a variety of ways. The T(sub B)'s at 23.8 and 89 GHz are more strongly affected by altostratus liquid clouds than by cirrus clouds for equivalent water paths. In contrast, channels near 157 and 183 GHz are more strongly affected by ice clouds. Higher clouds have a greater impact on 157- and 183-GHz T(sub B)'s than do lower clouds. Clouds depress T(sub B)'s of the higher-frequency channels by suppressing, but not necessarily obscuring, radiance contributions from below. Thus, T(sub B)'s are less closely associated with cloud-top temperatures than are IR radiometric temperatures. Water vapor alone accounts for up to 89% of the total attenuation by a midtropospheric liquid cloud for channels near 183 GHz. The Rayleigh approximation is found to be adequate for typical droplet size distributions; however, Mie scattering effects from liquid droplets become important for droplet size distribution functions with modal radii greater than 20 micrometers near 157 and 183 GHz, and greater than 30-40 micrometers at 89 GHz. This is due mainly to the relatively small concentrations of droplets much larger than the mode radius. Orographic clouds and tropical cumuli have been observed to contain droplet size distributions with mode radii in the 30-40 micrometers range. Thus, as new instruments bridge the gap between microwave and infrared to frequencies even higher than 183 GHz, radiative transfer modelers are cautioned to explicitly address scattering characteristics of such clouds.

Comparison of erosion and channel characteristics

USGS Publications Warehouse

Parker, Gene W.

1998-01-01

Erosion was observed at 33 percent of 22,495 bridge sites in nine States. Among sites with erosion, 56 percent were associated with skewed flows, curved channels, or a combination of these two conditions, and at 18 percent of the sites, channels were straight with steep bank angles. The remaining 26 percent are sites with observable erosion at piers or abutments on straight channels. Comparison of the sites with erosion to channel bed-material indicate that 44 percent of the single-span sites had gravel-size or smaller bed material and 70 percent of the multiple-span sites had gravel-size or smaller bed material.

Particle size variations between bed load and bed material in natural gravel bed channels

Treesearch

Thomas E. Lisle

1995-01-01

Abstract - Particle sizes of bed load and bed material that represent materials transported and stored over a period of years are used to investigate selective transport in 13 previously sampled, natural gravel bed channels. The ratio (D*) of median particle size of bed material to the transport- and frequency-weighted mean of median bed load size decreases to unity...

Effect of Processing Parameters on Pore Structure and Thickness of Anodic Aluminum Oxide (AAO) Tubular Membranes.

PubMed

Belwalkar, A; Grasing, E; Van Geertruyden, W; Huang, Z; Misiolek, W Z

2008-07-01

Nanoporous anodic aluminum oxide (AAO) tubular membranes were fabricated from aluminum alloy tubes in sulfuric and oxalic acid electrolytes using a two-step anodization process. The membranes were investigated for characteristics such as pore size, interpore distance and thickness by varying applied voltage and electrolyte concentration. Morphology of the membranes was examined using light optical and scanning electron microscopy and characterized using ImageJ software. Results showed that membranes having narrow pore size and uniform pore distribution with parallel channel arrays were obtained. The pore sizes were ranging from 14 to 24 nm and the wall thicknesses as high as 76 microm. It was found that the pore size increased in direct proportion with the applied voltage and inversely with the electrolyte concentration while the interpore distance increased linearly with the applied voltage. It was also observed that increase in acid concentration increased tubular membrane wall thickness that improved mechanical handling. By using anodic alumina technology, robust ceramic tubes with uniformly distributed pore-structure and parallel nano-channels of lengths and sizes practical for industrial applications were reliably produced in quantity.

Effect of Processing Parameters on Pore Structure and Thickness of Anodic Aluminum Oxide (AAO) Tubular Membranes

PubMed Central

Belwalkar, A.; Grasing, E.; Huang, Z.; Misiolek, W.Z.

2008-01-01

Nanoporous anodic aluminum oxide (AAO) tubular membranes were fabricated from aluminum alloy tubes in sulfuric and oxalic acid electrolytes using a two-step anodization process. The membranes were investigated for characteristics such as pore size, interpore distance and thickness by varying applied voltage and electrolyte concentration. Morphology of the membranes was examined using light optical and scanning electron microscopy and characterized using ImageJ software. Results showed that membranes having narrow pore size and uniform pore distribution with parallel channel arrays were obtained. The pore sizes were ranging from 14 to 24 nm and the wall thicknesses as high as 76 µm. It was found that the pore size increased in direct proportion with the applied voltage and inversely with the electrolyte concentration while the interpore distance increased linearly with the applied voltage. It was also observed that increase in acid concentration increased tubular membrane wall thickness that improved mechanical handling. By using anodic alumina technology, robust ceramic tubes with uniformly distributed pore-structure and parallel nano-channels of lengths and sizes practical for industrial applications were reliably produced in quantity. PMID:19578471

Fluvial islands: First stage of development from nonmigrating (forced) bars and woody-vegetation interactions

NASA Astrophysics Data System (ADS)

Wintenberger, Coraline L.; Rodrigues, Stéphane; Bréhéret, Jean-Gabriel; Villar, Marc

2015-10-01

Fluvial islands can develop from the channel bed by interactions between pioneer trees and bars. Although vegetation recruitment and survival is possible on all bar types, it is easier for trees to survive on nonmigrating bars developed from a change in channel geometry or to the presence of a steady perturbation. This field study details the first stages of development of a vegetated mid-channel, nonmigrating (or forced) bar and its evolution toward an island form. Over six years, analysis of bed topographical changes, vegetation density and roughness, scour and fill depths, sediment grain size and architecture, and excess bed shear stress highlighted a specific signature of trees on topography and grain size segregation. Two depositional processes combining the formation of obstacle marks and upstream-shifting deposition of sediments led to the vertical accretion of the vegetated bar. During the first stage of the bar accretion, bedload sediment supply coming from surrounding channels during floods was identified as a key process modulated by the presence of woody vegetation and a deflection effect induced by the preexisting topography. Grain size segregation between vegetated and bare areas was also highlighted and interpreted as an important process affecting the development of surrounding channels and the degree of disconnection (and hence the speed of development) of a growing island. The heterogeneity of bedload supply can explain why sediment deposition and density of trees are not strictly related. A general conceptual model detailing the first stages of evolution from a bar to an established island is proposed for relatively large lowland rivers.

Effect of an entrained air bubble on the acoustics of an ink channel.

PubMed

Jeurissen, Roger; de Jong, Jos; Reinten, Hans; van den Berg, Marc; Wijshoff, Herman; Versluis, Michel; Lohse, Detlef

2008-05-01

Piezo-driven inkjet systems are very sensitive to air entrapment. The entrapped air bubbles grow by rectified diffusion in the ink channel and finally result in nozzle failure. Experimental results on the dynamics of fully grown air bubbles are presented. It is found that the bubble counteracts the pressure buildup necessary for the droplet formation. The channel acoustics and the air bubble dynamics are modeled. For good agreement with the experimental data it is crucial to include the confined geometry into the model: The air bubble acts back on the acoustic field in the channel and thus on its own dynamics. This two-way coupling limits further bubble growth and thus determines the saturation size of the bubble.

Quantifying the determinants of decremental response in critical ventricular tachycardia substrate.

PubMed

Beheshti, Mohammadali; Nayyar, Sachin; Magtibay, Karl; Massé, Stéphane; Porta-Sanchez, Andreu; Haldar, Shouvik; Bhaskaran, Abhishek; Vigmond, Edward; Nanthakumar, Kumaraswamy

2018-05-28

Decremental response evoked with extrastimulation (DEEP) is a useful tool for determining diastolic return path of ventricular tachycardia (VT). Though a targeted VT ablation is feasible with this approach, determinants of DEEP response have not been studied OBJECTIVES: To elucidate the effects of clinically relevant factors, specifically, the proximity of the stimulation site to the arrhythmogenic scar, stimulation wave direction, number of channels open in the scar, size of the scar and number of extra stimuli on decrement and entropy of DEEP potentials. In a 3-dimensional bi-domain simulation of human ventricular tissue (TNNP cell model), an irregular subendocardial myopathic region was generated. An irregular channel of healthy tissue with five potential entry branches was shaped into the myopathic region. A bipolar electrogram was derived from two electrodes positioned in the centre of the myopathic region. Evoked delays between far-field and local Electrogram (EGM) following an extrastimulus (S1-S2, 500-350 ms) were measured as the stimulation site, channel branches, and inexcitable tissue size were altered. Stimulation adjacent to the inexcitable tissue from the side opposite to the point-of-entry produces longest DEEP delay. The DEEP delay shortens when the stimulation point is farther away from the scar, and it decreases maximally when stimulation is done from a site beside a conduction barrier. Entropy increases with S2 when stimulation site is from farther away. An unprotected channel structure with multiple side-branch openings had shorter DEEP delay compared to a protected channel structure with a paucity of additional side-branch openings and a point-of-entry on the side opposite to the pacing source. Addition of a second shorter extrastimulus did not universally lead to higher DEEP delay CONCLUSIONS: Location and direction of the wavefront in relation to scar entry and size of scar determine the degree of evoked response while the number of extrastimuli has a small additional decremental effect. Copyright © 2018 Elsevier Ltd. All rights reserved.

Imaging the Human Aqueous Humor Outflow Pathway in Human Eyes by Three Dimensional Micro-Computed Tomography (3D micro-CT)

PubMed Central

Hann, Cheryl R.; Bentley, Michael D.; Vercnocke, Andrew; Ritman, Erik L.; Fautsch, Michael P.

2011-01-01

The site of outflow resistance leading to elevated intraocular pressure in primary open angle glaucoma is believed to be located in the region of Schlemm’s canal inner wall endothelium, its basement membrane and the adjacent juxtacanalicular tissue. Evidence also suggests collector channels and intrascleral vessels may have a role in intraocular pressure in both normal and glaucoma eyes. Traditional imaging modalities limit the ability to view both proximal and distal portions of the trabecular outflow pathway as a single unit. In this study, we examined the effectiveness of three-dimensional micro-computed tomography (3D micro-CT) as a potential method to view the trabecular outflow pathway. Two normal human eyes were used: one immersion fixed in 4% paraformaldehyde, and one with anterior chamber perfusion at 10 mmHg followed by perfusion fixation in 4% paraformaldehyde/2% glutaraldehyde. Both eyes were postfixed in 1% osmium tetroxide, and scanned with 3D micro-CT at 2 µm or 5 µm voxel resolution. In the immersion fixed eye, 24 collector channels were identified with an average orifice size of 27.5 ± 5 µm. In comparison, the perfusion fixed eye had 29 collector channels with a mean orifice size of 40.5 ± 13 µm. Collector channels were not evenly dispersed around the circumference of the eye. There was no significant difference in the length of Schlemm’s canal in the immersed versus the perfused eye (33.2 versus 35.1 mm). Structures, locations and size measurements identified by 3D micro-CT were confirmed by correlative light microscopy. These findings confirm 3D micro-CT can be used effectively for the non-invasive examination of the trabecular meshwork, Schlemm’s canal, collector channels and intrascleral vasculature that comprise the distal outflow pathway. This imaging modality will be useful for noninvasive study of the role of the trabecular outflow pathway as a whole unit. PMID:21187085

Imaging the Aqueous Humor Outflow Pathway in Human Eyes by Three-dimensional Micro-computed Tomography (3D micro-CT)

DOE Office of Scientific and Technical Information (OSTI.GOV)

C Hann; M Bentley; A Vercnocke

2011-12-31

The site of outflow resistance leading to elevated intraocular pressure in primary open-angle glaucoma is believed to be located in the region of Schlemm's canal inner wall endothelium, its basement membrane and the adjacent juxtacanalicular tissue. Evidence also suggests collector channels and intrascleral vessels may have a role in intraocular pressure in both normal and glaucoma eyes. Traditional imaging modalities limit the ability to view both proximal and distal portions of the trabecular outflow pathway as a single unit. In this study, we examined the effectiveness of three-dimensional micro-computed tomography (3D micro-CT) as a potential method to view the trabecularmore » outflow pathway. Two normal human eyes were used: one immersion fixed in 4% paraformaldehyde and one with anterior chamber perfusion at 10 mmHg followed by perfusion fixation in 4% paraformaldehyde/2% glutaraldehyde. Both eyes were postfixed in 1% osmium tetroxide and scanned with 3D micro-CT at 2 {mu}m or 5 {mu}m voxel resolution. In the immersion fixed eye, 24 collector channels were identified with an average orifice size of 27.5 {+-} 5 {mu}m. In comparison, the perfusion fixed eye had 29 collector channels with a mean orifice size of 40.5 {+-} 13 {mu}m. Collector channels were not evenly dispersed around the circumference of the eye. There was no significant difference in the length of Schlemm's canal in the immersed versus the perfused eye (33.2 versus 35.1 mm). Structures, locations and size measurements identified by 3D micro-CT were confirmed by correlative light microscopy. These findings confirm 3D micro-CT can be used effectively for the non-invasive examination of the trabecular meshwork, Schlemm's canal, collector channels and intrascleral vasculature that comprise the distal outflow pathway. This imaging modality will be useful for non-invasive study of the role of the trabecular outflow pathway as a whole unit.« less

Modeling the morphogenesis of brine channels in sea ice.

PubMed

Kutschan, B; Morawetz, K; Gemming, S

2010-03-01

Brine channels are formed in sea ice under certain constraints and represent a habitat of different microorganisms. The complex system depends on a number of various quantities as salinity, density, pH value, or temperature. Each quantity governs the process of brine channel formation. There exists a strong link between bulk salinity and the presence of brine drainage channels in growing ice with respect to both the horizontal and vertical planes. We develop a suitable phenomenological model for the formation of brine channels both referring to the Ginzburg-Landau theory of phase transitions as well as to the chemical basis of morphogenesis according to Turing. It is possible to conclude from the critical wave number on the size of the structure and the critical parameters. The theoretically deduced transition rates have the same magnitude as the experimental values. The model creates channels of similar size as observed experimentally. An extension of the model toward channels with different sizes is possible. The microstructure of ice determines the albedo feedback and plays therefore an important role for large-scale global circulation models.

Bidirectional optical subassembly-shaped 20-Gbit/s compact single-mode four-channel wavelength-division multiplexing optical modules for optical multimedia interfaces

NASA Astrophysics Data System (ADS)

Lim, Kwon-Seob; Yu, Hong-Yeon; Park, Hyoung-Jun; Kang, Hyun Seo; Jang, Jae-Hyung

2016-06-01

Low-cost single-mode four-channel optical transmitter and receiver modules using the wavelength-division multiplexing (WDM) method have been developed for long-reach fiber optic applications. The single-mode four-channel WDM optical transmitter and receiver modules consist of two dual-wavelength optical transmitter and receiver submodules, respectively. The integration of two channels in a glass-sealed transistor outline-can package is an effective way to reduce cost and size and to extend the number of channels. The clear eye diagrams with more than about 6 dB of the extinction ratio and the minimum receiver sensitivity of lower than -16 dBm at a bit error rate of 10-12 have been obtained for the transmitter and receiver modules, respectively, at 5 Gbps/channel. The 4K ultrahigh definition contents have been transmitted over a 1-km-long single-mode fiber using a pair of proposed four-channel transmitter optical subassembly and receiver optical subassembly.

Fabrication of polydimethylsiloxane (PDMS) nanofluidic chips with controllable channel size and spacing.

PubMed

Peng, Ran; Li, Dongqing

2016-10-07

The ability to create reproducible and inexpensive nanofluidic chips is essential to the fundamental research and applications of nanofluidics. This paper presents a novel and cost-effective method for fabricating a single nanochannel or multiple nanochannels in PDMS chips with controllable channel size and spacing. Single nanocracks or nanocrack arrays, positioned by artificial defects, are first generated on a polystyrene surface with controllable size and spacing by a solvent-induced method. Two sets of optimal working parameters are developed to replicate the nanocracks onto the polymer layers to form the nanochannel molds. The nanochannel molds are used to make the bi-layer PDMS microchannel-nanochannel chips by simple soft lithography. An alignment system is developed for bonding the nanofluidic chips under an optical microscope. Using this method, high quality PDMS nanofluidic chips with a single nanochannel or multiple nanochannels of sub-100 nm width and height and centimeter length can be obtained with high repeatability.

The effect of basal channels on oceanic ice-shelf melting

NASA Astrophysics Data System (ADS)

Millgate, Thomas; Holland, Paul R.; Jenkins, Adrian; Johnson, Helen L.

2013-12-01

The presence of ice-shelf basal channels has been noted in a number of Antarctic and Greenland ice shelves, but their impact on basal melting is not fully understood. Here we use the Massachusetts Institute of Technology general circulation model to investigate the effect of ice-shelf basal channels on oceanic melt rate for an idealized ice shelf resembling the floating tongue of Petermann Glacier in Greenland. The introduction of basal channels prevents the formation of a single geostrophically balanced boundary current; instead the flow is diverted up the right-hand (Coriolis-favored) side of each channel, with a return flow in the opposite direction on the left-hand side. As the prescribed number of basal channels is increased the mean basal melt rate decreases, in agreement with previous studies. For a small number of relatively wide channels the subice flow is found to be a largely geostrophic horizontal circulation. The reduction in melt rate is then caused by an increase in the relative contribution of weakly melting channel crests and keels. For a larger number of relatively narrow channels, the subice flow changes to a vertical overturning circulation. This change in circulation results in a weaker sensitivity of melt rates to channel size. The transition between the two regimes is governed by the Rossby radius of deformation. Our results explain why basal channels play an important role in regulating basal melting, increasing the stability of ice shelves.

Effects of rainfall on oil droplet size and the dispersion of spilled oil with application to Douglas Channel, British Columbia, Canada.

PubMed

Wu, Yongsheng; Hannah, Charles G; Thupaki, Pramod; Mo, Ruping; Law, Brent

2017-01-15

Raindrops falling on the sea surface produce turbulence. The present study examined the influence of rain-induced turbulence on oil droplet size and dispersion of oil spills in Douglas Channel in British Columbia, Canada using hourly atmospheric data in 2011-2013. We examined three types of oils: a light oil (Cold Lake Diluent - CLD), and two heavy oils (Cold Lake Blend - CLB and Access Western Blend - AWB). We found that the turbulent energy dissipation rate produced by rainfalls is comparable to what is produced by wind-induced wave breaking in our study area. With the use of chemical dispersants, our results indicate that a heavy rainfall (rain rate>20mmh -1 ) can produce the maximum droplet size of 300μm for light oil and 1000μm for heavy oils, and it can disperse the light oil with fraction of 22-45% and the heavy oils of 8-13%, respectively. Heavy rainfalls could be a factor for the fate of oil spills in Douglas Channel, especially for a spill of light oil and the use of chemical dispersants. Crown Copyright © 2016. Published by Elsevier Ltd. All rights reserved.

QUANTIFYING STRUCTURAL PHYSICAL HABITAT ATTRIBUTES USING LIDAR AND HYPERSPECTRAL IMAGERY

EPA Science Inventory

Structural physical habitat attributes include indices of stream size, channel gradient, substrate size, habitat complexity and cover, riparian vegetation cover and structure, anthropogenic disturbances and channel-riparian interaction. These habitat attributes will vary dependen...

Pharmacological preconditioning by diazoxide downregulates cardiac L-type Ca2+ channels

PubMed Central

González, G; Zaldívar, D; Carrillo, ED; Hernández, A; García, MC; Sánchez, JA

2010-01-01

BACKGROUND AND PURPOSE Pharmacological preconditioning (PPC) with mitochondrial ATP-sensitive K+ (mitoKATP) channel openers such as diazoxide, leads to cardioprotection against ischaemia. However, effects on Ca2+ homeostasis during PPC, particularly changes in Ca2+ channel activity, are poorly understood. We investigated the effects of PPC on cardiac L-type Ca2+ channels. EXPERIMENTAL APPROACH PPC was induced in isolated hearts and enzymatically dissociated cardiomyocytes from adult rats by preincubation with diazoxide. We measured reactive oxygen species (ROS) production and Ca2+ signals associated with action potentials using fluorescent probes, and L-type currents using a whole-cell patch-clamp technique. Levels of the α1c subunit of L-type channels in the cellular membrane were measured by Western blot. KEY RESULTS PPC was accompanied by a 50% reduction in α1c subunit levels, and by a reversible fall in L-type current amplitude and Ca2+ transients. These effects were prevented by the ROS scavenger N-acetyl-L-cysteine (NAC), or by the mitoKATP channel blocker 5-hydroxydecanoate (5-HD). PPC signficantly reduced infarct size, an effect blocked by NAC and 5-HD. Nifedipine also conferred protection against infarction when applied during the reperfusion period. Downregulation of the α1c subunit and Ca2+ channel function were prevented in part by the protease inhibitor leupeptin. CONCLUSIONS AND IMPLICATIONS PPC downregulated the α1c subunit, possibly through ROS. Downregulation involved increased degradation of the Ca2+ channel, which in turn reduced Ca2+ influx, which may attenuate Ca2+ overload during reperfusion. PMID:20636393

A geometrically adjustable receive array for imaging marmoset cohorts.

PubMed

Gilbert, Kyle M; Gati, Joseph S; Klassen, L Martyn; Zeman, Peter; Schaeffer, David J; Everling, Stefan; Menon, Ravi S

2017-08-01

The common marmoset (Callithrix jacchus) is an increasingly popular animal model for translational neuroscience studies, during which anatomical and functional MRI can be useful investigative tools. To attain the requisite SNR for high-resolution acquisitions, the radiofrequency coil must be optimized for the marmoset; however, relatively few custom coils have been developed that maximize SNR and are compatible with accelerated acquisitions. For the study of large populations of animals, the heterogeneity in animal size reduces the effectiveness of a "one size fits all" approach to coil sizing and makes coils tailored to individual animals cost and time prohibitive. The approach taken in this study was to create an 8-channel phased-array receive coil that was adjustable to the width of the marmoset head, thereby negating the need for tailored coils while still maintaining high SNR. Two marmosets of different size were imaged on a 9.4-T small-animal scanner. Consistent SNR was achieved in the periphery of the brain between head sizes. When compared to a 15-channel, "one size fits all" receive coil, the adjustable coil achieved 57% higher SNR in the superior frontal and parietal cortices and 29% higher SNR in the centre of the brain. The mean geometry factor of the adjustable coil was less than 1.2 for a 2-fold reduction factor in the left-right and anterior-posterior directions. Geometry factors were compared to the 15-channel coil to guide future designs. The adjustable coil was shown to be a practical means for anatomical and echo-planar imaging of marmoset cohorts. Copyright © 2017 Elsevier Inc. All rights reserved.

A Photo-Favorskii Ring Contraction Reaction: The Effect of Ring Size

PubMed Central

Kammath, Viju Balachandran; Šolomek, Tomáš; Ngoy, Bokolombe Pitchou; Heger, Dominik; Klán, Petr; Rubina, Marina; Givens, Richard S.

2012-01-01

The effect of ring size on the photo-Favorskii induced ring-contraction reaction of the hydroxybenzocycloalkanonyl acetate and mesylate esters (7a–d, 8a–c) has provided new insight into the mechanism of the rearrangement. By monotonically decreasing the ring size in these cyclic derivatives, the increasing ring strain imposed on the formation of the elusive bicyclic spirocyclopropanone 20 results in a divergence away from rearrangement and toward solvolysis. Cycloalkanones of seven or eight carbons undergo a highly efficient photo-Favorskii rearrangement with ring contraction paralleling the photochemistry of p-hydroxyphenacyl esters. In contrast, the five-carbon ring does not rearrange but is diverted to the photosolvolysis channel avoiding the increased strain energy that would accompany the formation of the spirobicyclic ketone, the “Favorskii intermediate 20”. The six-carbon analogue demonstrates the bifurcation in reaction channels, yielding a solvent-sensitive mixture of both. Employing a combination of time-resolved absorption measurements, quantum yield determinations, isotopic labeling, and solvent variation studies coupled with theoretical treatment, a more comprehensive mechanistic description of the rearrangement has emerged. PMID:22686289

Channel catfish Ictalurus punctatus size and feed conversion ratio

USDA-ARS?s Scientific Manuscript database

Channel catfish, Ictalurus punctatus, of five size-classes were stocked into 20, 0.04-ha earthen ponds at a rate of 14,826 fish/ha. Mean initial weights for each size-class were 0.232, 0.458, 0.678, 0.911, and 1.10 kg/fish. Four ponds were randomly allotted to each treatment. A commercial 28% protei...

Using a Numerical Model to Assess the Geomorphic Impacts of Forest Management Scenarios on Streams

NASA Astrophysics Data System (ADS)

Davidson, S. L.; Eaton, B. C.

2014-12-01

In-stream large wood governs the morphology of many small to intermediate streams, while riparian vegetation influences bank strength and channel pattern. Forest management practices such as harvesting and fire suppression therefore dramatically influence channel processes and associated aquatic habitat. The primary objective of this research is to compare the impacts of three common forest scenarios - natural fire disturbance, forest harvesting with a riparian buffer, and fire suppression - on the volume of in-channel wood and the complexity of aquatic habitat in channels at a range of scales. Each scenario is explored through Monte Carlo simulations run over a period of 1000 years using a numerical reach scale channel simulator (RSCS), with variations in tree toppling rate and forest density used to represent each forest management trajectory. The habitat complexity associated with each scenario is assessed based on the area of the bed occupied by pools and spawning sized sediment, the availability of wood cover, and the probability of avulsion. Within the fire scenario, we also use the model to separately investigate the effects of root decay and recovery on equilibrium channel geometry by varying the rooting depth and associated bank strength through time. The results show that wood loading and habitat complexity are influenced by the timing and magnitude of wood recruitment, as well as channel scale. The forest harvesting scenario produces the lowest wood loads and habitat complexity so long as the buffer width is less than the average mature tree height. The natural fire cycle produces the greatest wood loading and habitat complexity, but also the greatest variability because these streams experience significant periods without wood recruitment as forests regenerate. In reaches that experience recurrent fires, width increases in the post-fire period as roots decay, at times producing a change in channel pattern when a threshold width to depth ratio is exceeded, and decreases as the forest regenerates. In all cases, the effects are greatest in small to intermediate sized streams where wood is the dominant driver of channel morphology, and become negligible in large streams governed by fluvial processes.

Investigation of MeV-Cu implantation and channeling effects into porous silicon formation

NASA Astrophysics Data System (ADS)

Ahmad, M.; Naddaf, M.

2011-11-01

P-type (1 1 1) silicon wafers were implanted by copper ions (2.5 MeV) in channeling and random directions using ion beam accelerator of the Atomic Energy Commission of Syria (AECS). The effect of implantation direction on formation process of porous silicon (PS) using electrochemical etching method has been investigated using scanning electron microscope (SEM) and photoluminescence (PL) techniques. SEM observations revealed that the size, shape and density of the formed pores are highly affected by the direction of beam implantation. This in turn is seen to influence the PL behavior of the PS.

Polycrystalline silicon thin-film transistors with location-controlled crystal grains fabricated by excimer laser crystallization

NASA Astrophysics Data System (ADS)

Tsai, Chun-Chien; Lee, Yao-Jen; Chiang, Ko-Yu; Wang, Jyh-Liang; Lee, I.-Che; Chen, Hsu-Hsin; Wei, Kai-Fang; Chang, Ting-Kuo; Chen, Bo-Ting; Cheng, Huang-Chung

2007-11-01

In this paper, location-controlled silicon crystal grains are fabricated by the excimer laser crystallization method which employs amorphous silicon spacer structure and prepatterned thin films. The amorphous silicon spacer in nanometer-sized width formed using spacer technology is served as seed crystal to artificially control superlateral growth phenomenon during excimer laser irradiation. An array of 1.8-μm-sized disklike silicon grains is formed, and the n-channel thin-film transistors whose channels located inside the artificially-controlled crystal grains exhibit higher performance of field-effect-mobility reaching 308cm2/Vs as compared with the conventional ones. This position-manipulated silicon grains are essential to high-performance and good uniformity devices.

Sub-Grid Modeling of Electrokinetic Effects in Micro Flows

NASA Technical Reports Server (NTRS)

Chen, C. P.

2005-01-01

Advances in micro-fabrication processes have generated tremendous interests in miniaturizing chemical and biomedical analyses into integrated microsystems (Lab-on-Chip devices). To successfully design and operate the micro fluidics system, it is essential to understand the fundamental fluid flow phenomena when channel sizes are shrink to micron or even nano dimensions. One important phenomenon is the electro kinetic effect in micro/nano channels due to the existence of the electrical double layer (EDL) near a solid-liquid interface. Not only EDL is responsible for electro-osmosis pumping when an electric field parallel to the surface is imposed, EDL also causes extra flow resistance (the electro-viscous effect) and flow anomaly (such as early transition from laminar to turbulent flow) observed in pressure-driven microchannel flows. Modeling and simulation of electro-kinetic effects on micro flows poses significant numerical challenge due to the fact that the sizes of the double layer (10 nm up to microns) are very thin compared to channel width (can be up to 100 s of m). Since the typical thickness of the double layer is extremely small compared to the channel width, it would be computationally very costly to capture the velocity profile inside the double layer by placing sufficient number of grid cells in the layer to resolve the velocity changes, especially in complex, 3-d geometries. Existing approaches using "slip" wall velocity and augmented double layer are difficult to use when the flow geometry is complicated, e.g. flow in a T-junction, X-junction, etc. In order to overcome the difficulties arising from those two approaches, we have developed a sub-grid integration method to properly account for the physics of the double layer. The integration approach can be used on simple or complicated flow geometries. Resolution of the double layer is not needed in this approach, and the effects of the double layer can be accounted for at the same time. With this approach, the numeric grid size can be much larger than the thickness of double layer. Presented in this report are a description of the approach, methodology for implementation and several validation simulations for micro flows.

A Monte Carlo Simulation of Vesicle Exocytosis in the Buffered Diffusion of Calcium Channel Currents

NASA Astrophysics Data System (ADS)

Dimcovic, Z.; Eagan, T. P.; Brown, R. W.; Petschek, R. G.; Eppell, S. J.; Yunker, A. M. R.; Sharp, A. H.; McEnery, M. W.

2001-04-01

The voltage-dependent opening of calcium channels results in an influx of calcium ions that leads to the fusion of synaptic vesicles with the cell membrane, resulting in the release of neurotransmitters. This allows nerve impulses to be transmitted from one neuron to another. A Monte Carlo model of the three-dimensional diffusion of calcium following a channel opening is employed to estimate the space and time dependence of the calcium density. The effects of fixed and mobile calcium buffers are included, and a tethered nearby vesicle is considered. The importance of the size and location of the vesicle is studied. When the vesicle is ignored, these results are compared with the analytical calculations of Naraghi and Neher and the Monte Carlo calculations of Bennett et al. The finite-vesicle-size analysis offers new insights into the process of neurosecretion. Support: NIH MH55747, AHA 96001250, NSF 0086643, and CWRU Presidential Research Initiative grants.

Using an experimental manipulation to determine the effectiveness of a stock enhancement program

USGS Publications Warehouse

Stewart, David R.; Long, James M.

2015-01-01

We used an experimental manipulation to determine the impact of stocking 178 mm channel catfish Ictalurus punctatus in six impoundments. The study design consisted of equal numbers (two) of control, ceased-stock, and stocked treatments that were sampled one year before and two years after stocking. Relative abundance, growth, size structure, and average weight significantly changed over time based on samples collected with hoop nets. Catch rates decreased at both ceased-stock lakes and increased for one stocked lake, while growth rates changed for at least one ceased-stock and stocked lake. The average weight of channel catfish in the ceased-stock treatment increased by 6% and 25%, whereas weight decreased by 28% and 78% in both stocked lakes. The variability in observed responses between lakes in both ceased-stock and stocked treatments indicates that a one-size-fits-all stocking agenda is impractical, suggesting lake specific and density-dependent mechanisms affect channel catfish population dynamics.

Biased Brownian motion in narrow channels with asymmetry and anisotropy

NASA Astrophysics Data System (ADS)

To, Kiwing; Peng, Zheng

2016-11-01

We study Brownian motion of a single millimeter size bead confined in a quasi-two-dimensional horizontal channel with built-in anisotropy and asymmetry. Channel asymmetry is implemented by ratchet walls while anisotropy is introduced using a channel base that is grooved along the channel axis so that a bead can acquire a horizontal impulse perpendicular to the longitudinal direction when it collides with the base. When energy is injected to the channel by vertical vibration, the combination of asymmetric walls and anisotropic base induces an effective force which drives the bead into biased diffusive motion along the channel axis with diffusivity and drift velocity increase with vibration strength. The magnitude of this driving force, which can be measured in experiments of tilted channel, is found to be consistent to those obtained from dynamic mobility and position probability distribution measurements. These results are explained by a simple collision model that suggests the random kinetic energies transfer between different translational degrees of freedom may be turned into useful work in the presence of asymmetry and anisotropy.

Biased Brownian motion in narrow channels with asymmetry and anisotropy

NASA Astrophysics Data System (ADS)

Peng, Zheng; To, Kiwing

2016-08-01

We study Brownian motion of a single millimeter size bead confined in a quasi-two-dimensional horizontal channel with built-in anisotropy and asymmetry. Channel asymmetry is implemented by ratchet walls while anisotropy is introduced using a channel base that is grooved along the channel axis so that a bead can acquire a horizontal impulse perpendicular to the longitudinal direction when it collides with the base. When energy is injected to the channel by vertical vibration, the combination of asymmetric walls and anisotropic base induces an effective force which drives the bead into biased diffusive motion along the channel axis with diffusivity and drift velocity increase with vibration strength. The magnitude of this driving force, which can be measured in experiments on a tilted channel, is found to be consistent with those obtained from dynamic mobility and position probability distribution measurements. These results are explained by a simple collision model that suggests the random kinetic energy transfer between different translational degrees of freedom may be turned into useful work in the presence of asymmetry and anisotropy.

Inertial effects on heat transfer in superhydrophobic microchannels

NASA Astrophysics Data System (ADS)

Cowley, Adam; Maynes, Daniel; Crockett, Julie; Iverson, Brian; BYU Fluids Team

2015-11-01

This work numerically studies the effects of inertia on thermal transport in superhydrophbic microchannels. An infinite parallel plate channel comprised of structured superhydrophbic walls is considered. The structure of the superhydrophobic surfaces consists of square pillars organized in a square array aligned with the flow direction. Laminar, fully developed flow is explored. The flow is assumed to be non-wetting and have an idealized flat meniscus. A shear-free, adiabatic boundary condition is used at the liquid/gas interface, while a no-slip, constant heat flux condition is used at the liquid/solid interface. A wide range of Peclet numbers, relative channel spacing distances, and relative pillar sizes are considered. Results are presented in terms of Poiseuille number, Nusselt number, hydrodynamic slip length, and temperature jump length. Interestingly, the thermal transport is varied only slightly by inertial effects for a wide range of parameters explored and compares well with other analytical and numerical work that assumed Stokes flow. It is only for very small relative channel spacing and large Peclet number that inertial effects exert significant influence. Overall, the heat transfer is reduced for the superhydrophbic channels in comparison to classic smooth walled channels. This research was supported by the National Science Foundation (NSF) - United States (Grant No. CBET-1235881).

Effects of hydraulic roughness on surface textures of gravel‐bed rivers

USGS Publications Warehouse

Buffington, John M.; Montgomery, David R.

1999-01-01

Field studies of forest gravel‐bed rivers in northwestern Washington and southeastern Alaska demonstrate that bed‐surface grain size is responsive to hydraulic roughness caused by bank irregularities, bars, and wood debris. We evaluate textural response by comparing reach‐average median grain size (D50) to that predicted from the total bank‐full boundary shear stress (т0bf), representing a hypothetical reference condition of low hydraulic roughness. For a given т0bf, channels with progressively greater hydraulic roughness have systematically finer bed surfaces, presumably due to reduced bed shear stress, resulting in lower channel competence and diminished bed load transport capacity, both of which promote textural fining. In channels with significant hydraulic roughness, observed values D50 can be up to 90% smaller than those predicted from т0bf. We find that wood debris plays an important role at our study sites, not only providing hydraulic roughness but also influencing pool spacing, frequency of textural patches, and the amplitude and wavelength of bank and bar topography and their consequent roughness. Our observations also have biological implications. We find that textural fining due to hydraulic roughness can create usable salmonid spawning gravels in channels that otherwise would be too coarse.

Proof-of-principle test of coherent-state continuous variable quantum key distribution through turbulent atmosphere (Conference Presentation)

NASA Astrophysics Data System (ADS)

Derkach, Ivan D.; Peuntinger, Christian; Ruppert, László; Heim, Bettina; Gunthner, Kevin; Usenko, Vladyslav C.; Elser, Dominique; Marquardt, Christoph; Filip, Radim; Leuchs, Gerd

2016-10-01

Continuous-variable quantum key distribution is a practical application of quantum information theory that is aimed at generation of secret cryptographic key between two remote trusted parties and that uses multi-photon quantum states as carriers of key bits. Remote parties share the secret key via a quantum channel, that presumably is under control of of an eavesdropper, and which properties must be taken into account in the security analysis. Well-studied fiber-optical quantum channels commonly possess stable transmittance and low noise levels, while free-space channels represent a simpler, less demanding and more flexible alternative, but suffer from atmospheric effects such as turbulence that in particular causes a non-uniform transmittance distribution referred to as fading. Nonetheless free-space channels, providing an unobstructed line-of-sight, are more apt for short, mid-range and potentially long-range (using satellites) communication and will play an important role in the future development and implementation of QKD networks. It was previously theoretically shown that coherent-state CV QKD should be in principle possible to implement over a free-space fading channel, but strong transmittance fluctuations result in the significant modulation-dependent channel excess noise. In this regime the post-selection of highly transmitting sub-channels may be needed, which can even restore the security of the protocol in the strongly turbulent channels. We now report the first proof-of-principle experimental test of coherent state CV QKD protocol using different levels Gaussian modulation over a mid-range (1.6-kilometer long) free-space atmospheric quantum channel. The transmittance of the link was characterized using intensity measurements for the reference but channel estimation using the modulated coherent states was also studied. We consider security against Gaussian collective attacks, that were shown to be optimal against CV QKD protocols . We assumed a general entangling cloner collective attack (modeled using data obtained from the state measurement results on both trusted sides of the protocol), that allows to purify the noise added in the quantum channel . Our security analysis of coherent-state protocol also took into account the effect of imperfect channel estimation, limited post-processing efficiency and finite data ensemble size on the performance of the protocol. In this regime we observe the positive key rate even without the need of applying post-selection. We show the positive improvement of the key rate with increase of the modulation variance, still remaining low enough to tolerate the transmittance fluctuations. The obtained results show that coherent-state CV QKD protocol that uses real free-space atmospheric channel can withstand negative influence of transmittance fluctuations, limited post-processing efficiency, imperfect channel estimation and other finite-size effects, and be successfully implemented. Our result paves the way to the full-scale implementation of the CV QKD in real free-space channels at mid-range distances.

Effects of comprehensive function of factors on retention behavior of microparticles in gravitational field-flow fractionation.

PubMed

Guo, Shuang; Qiu, Bai-Ling; Zhu, Chen-Qi; Yang, Ya-Ya Gao; Wu, Di; Liang, Qi-Hui; Han, Nan-Yin

2016-09-15

Gravitational field-flow fractionation (GrFFF) is a useful technique for separation and characterization for micrometer-sized particles. Elution behavior of micrometer-sized particles in GrFFF was researched in this study. Particles in GrFFF channel are subject to hydrodynamic lift forces (HLF), fluid inertial forces and gravity, which drive them to different velocities by carrier flow, resulting in a size-based separation. Effects of ionic strength, flow rate and viscosity as well as methanol were investigated using polystyrene latex beads as model particles. This study is devoted to experimental verification of the effect of every factor and their comprehensive function. All experiments were performed to show isolated influence of every variable factor. The orthogonal design test was used to evaluate various factors comprehensively. Results suggested that retention ratio of particles increases with increasing flow rate or the viscosity of carrier liquid by adjusting external forces acting on particles. In addition, retention ratio increases as ionic strength decreases because of decreased electrostatic repulsion between particles and channel accumulation wall. As far as methanol, there is no general trend due to the change of both density and viscosity. On the basis of orthogonal design test it was found that viscosity of carrier liquid plays a significant role in determining resolution of micrometer-sized particles in GrFFF. Copyright © 2016 Elsevier B.V. All rights reserved.

Information content of visible and midinfrared radiances for retrieving tropical ice cloud properties

NASA Astrophysics Data System (ADS)

Chang, Kai-Wei; L'Ecuyer, Tristan S.; Kahn, Brian H.; Natraj, Vijay

2017-05-01

Hyperspectral instruments such as Atmospheric Infrared Sounder (AIRS) have spectrally dense observations effective for ice cloud retrievals. However, due to the large number of channels, only a small subset is typically used. It is crucial that this subset of channels be chosen to contain the maximum possible information about the retrieved variables. This study describes an information content analysis designed to select optimal channels for ice cloud retrievals. To account for variations in ice cloud properties, we perform channel selection over an ensemble of cloud regimes, extracted with a clustering algorithm, from a multiyear database at a tropical Atmospheric Radiation Measurement site. Multiple satellite viewing angles over land and ocean surfaces are considered to simulate the variations in observation scenarios. The results suggest that AIRS channels near wavelengths of 14, 10.4, 4.2, and 3.8 μm contain the most information. With an eye toward developing a joint AIRS-MODIS (Moderate Resolution Imaging Spectroradiometer) retrieval, the analysis is also applied to combined measurements from both instruments. While application of this method to MODIS yields results consistent with previous channel sensitivity studies, the analysis shows that this combination may yield substantial improvement in cloud retrievals. MODIS provides most information on optical thickness and particle size, aided by a better constraint on cloud vertical placement from AIRS. An alternate scenario where cloud top boundaries are supplied by the active sensors in the A-train is also explored. The more robust cloud placement afforded by active sensors shifts the optimal channels toward the window region and shortwave infrared, further constraining optical thickness and particle size.

Channel widening due to urbanization and a major flood can alter bed particle organization and bed stability in an urban boulder-bed channel

NASA Astrophysics Data System (ADS)

Prestegaard, K. L.; Behrns, K.; Blanchet, Z.; Hankin, E.

2007-12-01

The Anacostia River is a tributary of the Potomac River north of Washington D.C. that has become progressively more urbanized in the past 50 years. Bankfull discharge and bankfull width in the Anacostia have increased by 3- 4x in the past 50 years. Nearby watersheds of similar size and geology, but without significant urbanization, contain threshold gravel-bed streams. The Anacostia, however, is not a threshold channel; it exhibits break-up of boulder-bed channels in upstream reaches and significant gravel bar formation in downstream reaches. These gravel bars have grown and migrated considerably in the past 10-15 years, contributing significantly to local channel widening that can be twice that of adjacent reaches. The purpose of this study is to determine bedload transport rates and grain size distributions and their relationship to discharge, bed organization and sediment supply. Bed mobility data come from both bedload transport measurements and measurements of channel bed changes. Channel bed changes were obtained from a) repeated channel cross section surveys, b) surface and subsurface size distributions, and c) bed particle organization measurements (measurements of location of particles within reaches). These measurements were made prior to and after the floods of 2006, which equalled the largest floods on record for most parts of the Anacostia River. In some boulder bed reaches, boulders were removed from the center of the channel and deposited along and on the channel banks. The mid-channel boulders were replaced by sheets of gravel and cobbles, significantly altering the bed mobility of the channels.

Removal of impacted esophageal foreign bodies with a dual-channel endoscope: 19 cases

PubMed Central

WANG, CHANGXIONG; CHEN, PING

2013-01-01

There have been few reports concerning the endoscopic removal of impacted esophageal foreign bodies from patients. The objective of this study was to evaluate the effectiveness of dual-channel endoscopy in managing foreign-body ingestions in patients. A total of 19 patients with foreign-body ingestions between September 2008 and July 2011 were selected from the Digestive Endoscope Center in Lishui, a typical middle-sized city in China. The patients underwent endoscopy following admission. The impacted foreign bodies were successfully removed from 18 patients without complications using a dual-channel endoscope. One patient underwent surgery for an ingested denture following the failure of the endoscopic removal method. This study demonstrates that dual-channel endoscopic management may be a useful option for removing ingested foreign bodies from the esophagus. PMID:23935752

Changes to channel sediments resulting from complex human impacts in a gravel-bed river, Polish Carpathians

NASA Astrophysics Data System (ADS)

Zawiejska, Joanna; Wyżga, Bartłomiej; Hajdukiewicz, Hanna; Radecki-Pawlik, Artur; Mikuś, Paweł

2016-04-01

During the second half of the twentieth century, many sections of the Czarny Dunajec River, Polish Carpathians, were considerably modified by channelization as well as gravel-mining and the resultant channel incision (up to 3.5 m). This paper examines changes to the longitudinal pattern of grain size and sorting of bed material in an 18-km-long river reach. Surface bed-material grain size was established on 47 gravel bars and compared with a reference downstream fining trend of bar sediments derived from the sites with average river width and a vertically stable channel. Contrary to expectations, the extraction of cobbles from the channel bed in the upper part of the study reach, conducted in the past decades, has resulted in the marked coarsening of bed material in this river section. The extraction facilitated entrainment of exposed finer grains and has led to rapid bed degradation, whereas the concentration of flood flows in the increasingly deep and narrow channel has increased their competence and enabled a delivery of the coarse particles previously typical of the upstream reach. The middle section of the study reach, channelized to prevent sediment delivery to a downstream reservoir, now transfers the bed material flushed out from the incising upstream section. With considerably increased transport capacity of the river and with sediment delivery from bank erosion eliminated by bank reinforcements, bar sediments in the channelized section are typified by increased size of the finer fraction and better-than-average sorting. In the wide, multi-thread channel in the lower part of the reach, low unit stream power and high channel-form roughness facilitate sediment deposition and are reflected in relatively fine grades of bar gravels. The study showed that selective extraction of larger particles from the channel bed leads to channel incision at and upstream of the mining site. However, unlike bulk gravel mining, selective extraction does not result in sediment deficit downstream as large volumes of finer bed material are flushed out from the incising channel section. Grain-size analyses of bulk gravels and measurements of 100 coarsest particles within the channel sediment ranging in age from 5200 years BP to the present, performed in this deeply incised section, indicated that grain size of channel sediments changed relatively little since mid-Holocene to the 1960s, but has increased rapidly over the last half-century as a result of human interventions and rapidly progressing channel incision. This study was performed within the scope of the Research Project DEC-2013/09/B/ST10/00056 financed by the National Science Centre of Poland.

Infrared imaging and acoustic sizing of a bubble inside a micro-electro-mechanical system piezo ink channel

NASA Astrophysics Data System (ADS)

van der Bos, Arjan; Segers, Tim; Jeurissen, Roger; van den Berg, Marc; Reinten, Hans; Wijshoff, Herman; Versluis, Michel; Lohse, Detlef

2011-08-01

Piezo drop-on-demand inkjet printers are used in an increasing number of applications because of their reliable deposition of droplets onto a substrate. Droplets of a few picoliters are ejected from an inkjet nozzle at frequencies of up to 100 kHz. However, the entrapment of an air microbubble in the ink channel can severely impede the productivity and reliability of the printing system. The air bubble disturbs the channel acoustics, resulting in disrupted drop formation or failure of the jetting process. Here we study a micro-electro-mechanical systems-based printhead. By using the actuating piezo transducer in receive mode, the acoustical field inside the channel was monitored, clearly identifying the presence of an air microbubble inside the channel during failure of the jetting process. The infrared visualization technique allowed for the accurate sizing of the bubble, including its dynamics, inside the intact printhead. A model was developed to calculate the mutual interaction between the channel acoustics and the bubble dynamics. The model was validated by simultaneous acoustical and infrared detection of the bubble. The model can predict the presence and size of entrapped air bubbles inside an operating ink channel purely from the acoustic response.

Development of channel organization and roughness following sediment pulses in single‐thread, gravel bed rivers

USGS Publications Warehouse

Madej, Mary Ann

2001-01-01

Large, episodic inputs of coarse sediment (sediment pulses) in forested, mountain streams may result in changes in the size and arrangement of bed forms and in channel roughness. A conceptual model of channel organization delineates trajectories of response to sediment pulses for many types of gravel bed channels. Channels exhibited self‐organizing behavior to various degrees based on channel gradient, presence of large in‐channel wood or other forcing elements, the size of the sediment pulse, and the number of bed‐mobilizing flows since disturbance. Typical channel changes following a sediment pulse were initial decreases in water depth, in variability of bed elevations, and in the regularity of bed form spacing. Trajectories of change subsequently showed increased average water depth, more variable and complex bed topography, and increased uniformity of bed form spacing. Bed form spacing in streams with abundant forcing elements developed at a shorter spatial scale (two to five channel widths) than in streams without such forcing mechanisms (five to 10 channel widths). Channel roughness increased as bed forms developed.

Turbulence- and particle-resolved modeling of self-formed channels

NASA Astrophysics Data System (ADS)

Schmeeckle, M. W.

2016-12-01

A numerical model is presented that combines a large eddy simulation (LES) of turbulent water motion and a discrete element method (DEM) simulation of all sediment particles forming a small alluvial river. All simulations are begun with a relatively narrow and deep channel and a constant body force is applied to the fluid. At very small applied force at the critical shear stress for sediment motion the channel becomes wider and shallower. Transport on the banks becomes very small with larger transport at the center of the channel. However, even the very small bank transport resulted in continued net downslope motion and channel widening; bedload diffusion from higher transport areas of the channel is not sufficient to counteract downslope transport. This simulation will be extended over much longer times to determine whether an equilibrium straight channel with transport is possible without varying the water discharge. Simulations at slightly higher fluid forcing results in the development of alternate bars. Particle size segregation occurs in all simulations at multiple scales. At the smallest scale, turbulent structures induce small scale depressions; larger particles preferentially move to lower elevations of the depressions. Sloping beds at banks and bars also increase size segregation. However, bar translation mixes segregated sediments. Granular modeling of river channels appears to be a fruitful method for testing and developing continuum ideas of channel pattern formation and size segregation.

Turbulence-and particle-resolved modeling of self-formed channels

NASA Astrophysics Data System (ADS)

Schmeeckle, M. W.

2017-12-01

A numerical model is presented that combines a large eddy simulation (LES) of turbulent water motion and a discrete element method (DEM) simulation of all sediment particles forming a small alluvial river. All simulations are begun with a relatively narrow and deep channel and a constant body force is applied to the fluid. At very small applied force at the critical shear stress for sediment motion the channel becomes wider and shallower. Transport on the banks becomes very small with larger transport at the center of the channel. However, even the very small bank transport resulted in continued net downslope motion and channel widening; bedload diffusion from higher transport areas of the channel is not sufficient to counteract downslope transport. This simulation will be extended over much longer times to determine whether an equilibrium straight channel with transport is possible without varying the water discharge. Simulations at slightly higher fluid forcing results in the development of alternate bars. Particle size segregation occurs in all simulations at multiple scales. At the smallest scale, turbulent structures induce small scale depressions; larger particles preferentially move to lower elevations of the depressions. Sloping beds at banks and bars also increase size segregation. However, bar translation mixes segregated sediments. Granular modeling of river channels appears to be a fruitful method for testing and developing continuum ideas of channel pattern formation and size segregation.

Parsimonious mathematical characterization of channel shape and size

USDA-ARS?s Scientific Manuscript database

This work has two purposes: 1) using a Leopold and Maddock (1953) hydraulic geometry approach, present a mathematically parsimonious, two parameter, characterization of channel shape and size; and 2) analytically quantify cross-sectional area, top width, average depth, critical energy, and bankfull ...

Submicron Silicon MOSFET

NASA Technical Reports Server (NTRS)

Daud, T.

1986-01-01

Process for making metal-oxide/semiconductor field-effect transistors (MOSFET's) results in gate-channel lengths of only few hundred angstroms about 100 times as small as state-of-the-art devices. Gates must be shortened to develop faster MOSFET's; proposed fabrication process used to study effects of size reduction in MOS devices and eventually to build practical threedimensional structures.

Enhanced stability of steep channel beds to mass failure and debris flow initiation

NASA Astrophysics Data System (ADS)

Prancevic, J.; Lamb, M. P.; Ayoub, F.; Venditti, J. G.

2015-12-01

Debris flows dominate bedrock erosion and sediment transport in very steep mountain channels, and are often initiated from failure of channel-bed alluvium during storms. While several theoretical models exist to predict mass failures, few have been tested because observations of in-channel bed failures are extremely limited. To fill this gap in our understanding, we performed laboratory flume experiments to identify the conditions necessary to initiate bed failures in non-cohesive sediment of different sizes (D = 0.7 mm to 15 mm) on steep channel-bed slopes (S = 0.45 to 0.93) and in the presence of water flow. In beds composed of sand, failures occurred under sub-saturated conditions on steep bed slopes (S > 0.5) and under super-saturated conditions at lower slopes. In beds of gravel, however, failures occurred only under super-saturated conditions at all tested slopes, even those approaching the dry angle of repose. Consistent with theoretical models, mass failures under super-saturated conditions initiated along a failure plane approximately one grain-diameter below the bed surface, whereas the failure plane was located near the base of the bed under sub-saturated conditions. However, all experimental beds were more stable than predicted by 1-D infinite-slope stability models. In partially saturated sand, enhanced stability appears to result from suction stress. Enhanced stability in gravel may result from turbulent energy losses in pores or increased granular friction for failures that are shallow with respect to grain size. These grain-size dependent effects are not currently included in stability models for non-cohesive sediment, and they may help to explain better the timing and location of debris flow occurrence.

Some effects of electron channeling on electron energy loss spectroscopy.

PubMed

Kirkland, Earl J

2005-02-01

As an electron beam (of order 100 keV) travels through a crystalline solid it can be channeled down a zone axis of the crystal to form a channeling peak centered on the atomic columns. The channeling peak can be similar in size to the outer atomic orbitals. Electron energy loss spectroscopy (EELS) measures the losses that the electron experiences as it passes through the solid yielding information about the unoccupied density of states in the solid. The interaction matrix element for this process typically produces dipole selection rules for small angle scattering. In this paper, a theoretical calculation of the EELS cross section in the presence of strong channeling is performed for the silicon L23 edge. The presence of channeling is found to alter both the intensity and selection rules for this EELS signal as a function of depth in the solid. At some depths in the specimen small but significant non-dipole transition components can be produced, which may influence measurements of the density of states in solids.

Channel bed particle size distribution procedure used to evaluate watershed cumulative effects for range permit re-issuance on the Santa Fe National Forest

Treesearch

Bruce Sims; Jim Piatt; Lee Johnson; Carol Purchase; John Phillips

1996-01-01

Personnel on the Santa Fe National Forest used methodologies adapted from Bevenger and King (1995) to collect base line particle size data on streams within grazing allotments currently scheduled for permit reissuance. This information was used to determine the relative current health of the watersheds as well as being used in the development of potential alternatives...

The effect of channel height on bubble nucleation in superhydrophobic microchannels due to subcritical heating

NASA Astrophysics Data System (ADS)

Cowley, Adam; Maynes, Daniel; Crockett, Julie; Iverson, Brian

2017-11-01

This work experimentally investigates the effects of heating on laminar flow in high aspect ratio superhydrophobic (SH) microchannels. When water that is saturated with dissolved air is used, the unwetted cavities of the SH surfaces act as nucleation sites and air effervesces out of solution onto the surfaces. The microchannels consist of a rib/cavity structured SH surface, that is heated, and a glass surface that is utilized for flow visualization. Two channel heights of nominally 183 and 366 μm are considered. The friction factor-Reynolds product (fRe) is obtained via pressure drop and volumetric flow rate measurements and the temperature profile along the channel is obtained via thermocouples embedded in an aluminum block below the SH surface. Five surface types/configurations are investigated: smooth hydrophilic, smooth hydrophobic, SH with ribs perpendicular to the flow, SH with ribs parallel to the flow, and SH with both ribs parallel to the flow and sparse ribs perpendicular to the flow. Depending on the surface type/configuration, large bubbles can form and adversely affect fRe and lead to higher temperatures along the channel. Once bubbles grow large enough, they are expelled from the channel. The channel size greatly effects the residence time of the bubbles and consequently fRe and the channel temperature. This research was supported by the National Science Foundation (NSF) (Grant No. CBET-1235881) and the Utah NASA Space Grant Consortium (NASA Grant NNX15A124H).

Vascularized networks with two optimized channel sizes

NASA Astrophysics Data System (ADS)

Wang, K.-M.; Lorente, S.; Bejan, A.

2006-07-01

This paper reports the development of optimal vascularization for supplying self-healing smart materials with liquid that fills and seals the cracks that may occur throughout their volume. The vascularization consists of two-dimensional grids of interconnected orthogonal channels with two hydraulic diameters (D1, D2). The smallest square loop is designed to match the size (d) of the smallest crack. The network is sealed with respect to the outside and is filled with pressurized liquid. In this work, the crack site is modelled as a small spherical volume of diameter d. When a crack is formed, fluid flows from neighbouring channels to the crack site. This volume-to-point flow is optimized using two formulations: (1) incompressible liquid from steady constant-strength sources located in every node of the grid and from sources located equidistantly on the perimeter of the vascularized body of length scale L and (2) slightly compressible liquid from an initially pressurized grid discharging in time-dependent fashion into one crack site. The flow in every channel is laminar and fully developed. The objectives are (a) to minimize the global resistance to the flow from the grid to the crack site and (b) to minimize the time of discharge from the pressurized grid to the crack site. It is shown that methods (a) and (b) yield similar results. There is an optimal ratio of channel diameters D2/D1 < 1, and it decreases as the grid fineness (L/d) increases. The global flow resistance of the grid with optimized ratio of diameters is approximately half of the resistance of the corresponding grid with one channel size (D1 = D2). The optimized ratio of diameters and the minimized global resistance depend on how the grid intersects the crack site: this effect is minor and stresses the robustness of the vascularized design.

Pore dilatation increases the bicarbonate permeability of CFTR, ANO1 and glycine receptor anion channels

PubMed Central

Jun, Ikhyun; Cheng, Mary Hongying; Sim, Eunji; Jung, Jinsei; Suh, Bong Lim; Kim, Yonjung; Son, Hankil; Park, Kyungsoo; Kim, Chul Hoon; Yoon, Joo‐Heon; Whitcomb, David C.; Bahar, Ivet

2016-01-01

Key points Cellular stimuli can modulate the ion selectivity of some anion channels, such as CFTR, ANO1 and the glycine receptor (GlyR), by changing pore size.Ion selectivity of CFTR, ANO1 and GlyR is critically affected by the electric permittivity and diameter of the channel pore.Pore size change affects the energy barriers of ion dehydration as well as that of size‐exclusion of anion permeation.Pore dilatation increases the bicarbonate permeability (P HC O3/ Cl ) of CFTR, ANO1 and GlyR.Dynamic change in P HC O3/ Cl may mediate many physiological and pathological processes. Abstract Chloride (Cl−) and bicarbonate (HCO3 −) are two major anions and their permeation through anion channels plays essential roles in our body. However, the mechanism of ion selection by the anion channels is largely unknown. Here, we provide evidence that pore dilatation increases the bicarbonate permeability (P HC O3/ Cl ) of anion channels by reducing energy barriers of size‐exclusion and ion dehydration of HCO3 − permeation. Molecular, physiological and computational analyses of major anion channels, such as cystic fibrosis transmembrane conductance regulator (CFTR), anoctamin‐1(ANO1/TMEM16A) and the glycine receptor (GlyR), revealed that the ion selectivity of anion channels is basically determined by the electric permittivity and diameter of the pore. Importantly, cellular stimuli dynamically modulate the anion selectivity of CFTR and ANO1 by changing the pore size. In addition, pore dilatation by a mutation in the pore‐lining region alters the anion selectivity of GlyR. Changes in pore size affected not only the energy barriers of size exclusion but that of ion dehydration by altering the electric permittivity of water‐filled cavity in the pore. The dynamic increase in P HC O3/ Cl by pore dilatation may have many physiological and pathophysiological implications ranging from epithelial HCO3 − secretion to neuronal excitation. PMID:26663196

Network Structure as a Modulator of Disturbance Impacts in Streams

NASA Astrophysics Data System (ADS)

Warner, S.; Tullos, D. D.

2017-12-01

This study examines how river network structure affects the propagation of geomorphic and anthropogenic disturbances through streams. Geomorphic processes such as debris flows can alter channel morphology and modify habitat for aquatic biota. Anthropogenic disturbances such as road construction can interact with the geomorphology and hydrology of forested watersheds to change sediment and water inputs to streams. It was hypothesized that the network structure of streams within forested watersheds would influence the location and magnitude of the impacts of debris flows and road construction on sediment size and channel width. Longitudinal surveys were conducted every 50 meters for 11 kilometers of third-to-fifth order streams in the H.J. Andrews Experimental Forest in the Western Cascade Range of Oregon. Particle counts and channel geometry measurements were collected to characterize the geomorphic impacts of road crossings and debris flows as disturbances. Sediment size distributions and width measurements were plotted against the distance of survey locations through the network to identify variations in longitudinal trends of channel characteristics. Thresholds for the background variation in sediment size and channel width, based on the standard deviations of sample points, were developed for sampled stream segments characterized by location as well as geomorphic and land use history. Survey locations were classified as "disturbed" when they deviated beyond the reference thresholds in expected sediment sizes and channel widths, as well as flow-connected proximity to debris flows and road crossings. River network structure was quantified by drainage density and centrality of nodes upstream of survey locations. Drainage density and node centrality were compared between survey locations with similar channel characteristic classifications. Cluster analysis was used to assess the significance of survey location, proximity of survey location to debris flows and road crossings, drainage density and node centrality in predicting sediment size and channel width classifications for locations within the watershed. Results contribute to the understanding of susceptibility and responses of streams supporting critical habitat for aquatic species to debris flows and forest road disturbances.

Effectiveness of a multi-channel volumetric air receiver for a solar power tower

NASA Astrophysics Data System (ADS)

Jung, Eui Guk; Boo, Joon Hong; Kang, Yong Heak; Kim, Nak Hoon

2013-08-01

In this study, the heat transfer performance of a multi-channel volumetric air receiver for a solar power tower was numerically analyzed. The governing equations, including the solar radiation heat flux, conduction, convection and radiation heat transfer for a single channel, were solved on the basis of valid related references and a methodology that can predict the temperature distribution of the receiver wall and the heat transfer fluid for specific dimensions and input conditions. Furthermore, a mathematical model of the effectiveness of the receiver was derived from an analysis of the temperature profiles of the wall and the heat transfer fluid. The receiver effectiveness as an appropriate criterion to assess economic feasibility regarding geometric size was investigated, as it would be applied to the design process of the receiver. The main parameters for the thermal performance simulations described in this paper are the air mass flow rate, receiver length and the influence of these parameters on the heat transfer performance from the viewpoint of receiver efficiency and effectiveness.

Design and synthesis of guest-host nanostructures to enhance ionic conductivity across nanocomposite membranes

DOEpatents

Hu, Michael Z [Knoxville, TN; Kosacki, Igor [Oak Ridge, TN

2010-01-05

An ion conducting membrane has a matrix including an ordered array of hollow channels and a nanocrystalline electrolyte contained within at least some or all of the channels. The channels have opposed open ends, and a channel width of 1000 nanometers or less, preferably 60 nanometers or less, and most preferably 10 nanometers or less. The channels may be aligned perpendicular to the matrix surface, and the length of the channels may be 10 nanometers to 1000 micrometers. The electrolyte has grain sizes of 100 nanometers or less, and preferably grain sizes of 1 to 50 nanometers. The electrolyte may include grains with a part of the grain boundaries aligned with inner walls of the channels to form a straight oriented grain-wall interface or the electrolyte may be a single crystal. In one form, the electrolyte conducts oxygen ions, the matrix is silica, and the electrolyte is yttrium doped zirconia.

Near-bed turbulence and sediment flux measurements in tidal channels

USGS Publications Warehouse

Wright, S.A.; Whealdon-Haught, D.R.

2012-01-01

Understanding the hydrodynamics and sediment transport dynamics in tidal channels is important for studies of estuary geomorphology, sediment supply to tidal wetlands, aquatic ecology and fish habitat, and dredging and navigation. Hydrodynamic and sediment transport data are essential for calibration and testing of numerical models that may be used to address management questions related to these topics. Herein we report preliminary analyses of near-bed turbulence and sediment flux measurements in the Sacramento-San Joaquin Delta, a large network of tidal channels and wetlands located at the confluence of the Sacramento and San Joaquin Rivers, California, USA (Figure 1). Measurements were made in 6 channels spanning a wide range of size and tidal conditions, from small channels that are primarily fluvial to large channels that are tidally dominated. The results of these measurements are summarized herein and the hydrodynamic and sediment transport characteristics of the channels are compared across this range of size and conditions.

Protograph LDPC Codes Over Burst Erasure Channels

NASA Technical Reports Server (NTRS)

Divsalar, Dariush; Dolinar, Sam; Jones, Christopher

2006-01-01

In this paper we design high rate protograph based LDPC codes suitable for binary erasure channels. To simplify the encoder and decoder implementation for high data rate transmission, the structure of codes are based on protographs and circulants. These LDPC codes can improve data link and network layer protocols in support of communication networks. Two classes of codes were designed. One class is designed for large block sizes with an iterative decoding threshold that approaches capacity of binary erasure channels. The other class is designed for short block sizes based on maximizing minimum stopping set size. For high code rates and short blocks the second class outperforms the first class.

Enhancing the biocompatibility of microfluidics-assisted fabrication of cell-laden microgels with channel geometry.

PubMed

Kim, Suntae; Oh, Jonghyun; Cha, Chaenyung

2016-11-01

Microfluidic flow-focusing devices (FFD) are widely used to generate monodisperse droplets and microgels with controllable size, shape and composition for various biomedical applications. However, highly inconsistent and often low viability of cells encapsulated within the microgels prepared via microfluidic FFD has been a major concern, and yet this aspect has not been systematically explored. In this study, we demonstrate that the biocompatibility of microfluidic FFD to fabricate cell-laden microgels can be significantly enhanced by controlling the channel geometry. When a single emulsion ("single") microfluidic FFD is used to fabricate cell-laden microgels, there is a significant decrease and batch-to-batch variability in the cell viability, regardless of their size and composition. It is determined that during droplet generation, some of the cells are exposed to the oil phase which is shown to have a cytotoxic effect. Therefore, a microfluidic device with a sequential ('double') flow-focusing channels is employed instead, in which a secondary aqueous phase containing cells enters the primary aqueous phase, so the cells' exposure to the oil phase is minimized by directing them to the center of droplets. This microfluidic channel geometry significantly enhances the biocompatibility of cell-laden microgels, while maintaining the benefits of a typical microfluidic process. This study therefore provides a simple and yet highly effective strategy to improve the biocompatibility of microfluidic fabrication of cell-laden microgels. Copyright © 2016 Elsevier B.V. All rights reserved.

Possible role of opioids and KATP channels in neuroprotective effect of postconditioning in mice.

PubMed

Pateliya, Bharat Bhai; Singh, Nirmal; Jaggi, Amteshwar Singh

2008-09-01

The present study was designed to investigate the possible role of opioids and K(ATP) channels in ischemic postconditioning-induced reversal of global cerebral ischemia and reperfusion (I/R) induced neuronal injury. Mice were subjected to global ischemia by bilateral carotid artery occlusion for 10 min followed by reperfusion for 24 h, to produce neuronal injury. Ischemic postconditioning was induced by three episodes of carotid artery occlusion and reperfusion of 10 s each, immediately after global ischemia. Morphine postconditioning was induced by administration of morphine (5 mg/kg i.v.), 5 min prior to reperfusion. Naloxone (5 mg/kg i.v.), opioid receptor antagonist, and glibenclamide (5 mg/kg i.v.), K(ATP) channel blocker were administered 10 min before global ischemia. Extent of cerebral injury was assessed by measuring cerebral infarct size using triphenyl tetrazolium chloride (TTC) staining. Short-term memory was evaluated using the elevated plus maze test, while degree of motor incoordination was evaluated using inclined beam-walking, rota-rod and lateral push tests. Bilateral carotid artery occlusion followed by reperfusion resulted in significant increase in infarct size, impairment in short-term memory and motor co-ordination. Ischemic/morphine postconditioning significantly attenuated I/R induced neuronal injury and behavioural alterations. Pretreatments with naloxone and glibenclamide attenuated the neuroprotective effects of ischemic/morphine postconditioning. It may be concluded that ischemic/morphine postconditioning protects I/R induced cerebral injury via activating opioid receptor and K(ATP) channel opening.

Neuroprotective effect of gadolinium: a stretch-activated calcium channel blocker in mouse model of ischemia-reperfusion injury.

PubMed

Gulati, Puja; Muthuraman, Arunachalam; Jaggi, Amteshwar S; Singh, Nirmal

2013-03-01

The present study was designed to investigate the potential of gadolinium, a stretch-activated calcium channel blocker in ischemic reperfusion (I/R)-induced brain injury in mice. Bilateral carotid artery occlusion of 12 min followed by reperfusion for 24 h was given to induce cerebral injury in male Swiss mice. Cerebral infarct size was measured using triphenyltetrazolium chloride staining. Memory was assessed using Morris water maze test and motor incoordination was evaluated using rota-rod, lateral push, and inclined beam walking tests. In addition, total calcium, thiobarbituric acid reactive substance (TBARS), reduced glutathione (GSH), and acetylcholinesterase (AChE) activity were also estimated in brain tissue. I/R injury produced a significant increase in cerebral infarct size. A significant loss of memory along with impairment of motor performance was also noted. Furthermore, I/R injury also produced a significant increase in levels of TBARS, total calcium, AChE activity, and a decrease in GSH levels. Pretreatment of gadolinium significantly attenuated I/R-induced infarct size, behavioral and biochemical changes. On the basis of the present findings, we can suggest that opening of stretch-activated calcium channel may play a critical role in ischemic reperfusion-induced brain injury and that gadolinium has neuroprotective potential in I/R-induced injury.

Effect of Cavβ Subunits on Structural Organization of Cav1.2 Calcium Channels

PubMed Central

Duong, Son Q.; Thomas, Sam; Harry, Jo Beth; Patel, Chirag; Lao, Qi Zong; Soldatov, Nikolai M.

2009-01-01

Background Voltage-gated Cav1.2 calcium channels play a crucial role in Ca2+ signaling. The pore-forming α1C subunit is regulated by accessory Cavβ subunits, cytoplasmic proteins of various size encoded by four different genes (Cavβ1 - β4) and expressed in a tissue-specific manner. Methods and Results Here we investigated the effect of three major Cavβ types, β1b, β2d and β3, on the structure of Cav1.2 in the plasma membrane of live cells. Total internal reflection fluorescence microscopy showed that the tendency of Cav1.2 to form clusters depends on the type of the Cavβ subunit present. The highest density of Cav1.2 clusters in the plasma membrane and the smallest cluster size were observed with neuronal/cardiac β1b present. Cav1.2 channels containing β3, the predominant Cavβ subunit of vascular smooth muscle cells, were organized in a significantly smaller number of larger clusters. The inter- and intramolecular distances between α1C and Cavβ in the plasma membrane of live cells were measured by three-color FRET microscopy. The results confirm that the proximity of Cav1.2 channels in the plasma membrane depends on the Cavβ type. The presence of different Cavβ subunits does not result in significant differences in the intramolecular distance between the termini of α1C, but significantly affects the distance between the termini of neighbor α1C subunits, which varies from 67 Å with β1b to 79 Å with β3. Conclusions Thus, our results show that the structural organization of Cav1.2 channels in the plasma membrane depends on the type of Cavβ subunits present. PMID:19492014

Slick (Kcnt2) Sodium-Activated Potassium Channels Limit Peptidergic Nociceptor Excitability and Hyperalgesia.

PubMed

Tomasello, Danielle L; Hurley, Edward; Wrabetz, Lawrence; Bhattacharjee, Arin

2017-01-01

The Slick (Kcnt2) sodium-activated potassium (K Na ) channel is a rapidly gating and weakly voltage-dependent and sodium-dependent potassium channel with no clearly defined physiological function. Within the dorsal root ganglia (DRGs), we show Slick channels are exclusively expressed in small-sized and medium-sized calcitonin gene-related peptide (CGRP)-containing DRG neurons, and a pool of channels are localized to large dense-core vesicles (LDCV)-containing CGRP. We stimulated DRG neurons for CGRP release and found Slick channels contained within CGRP-positive LDCV translocated to the neuronal membrane. Behavioral studies in Slick knockout (KO) mice indicated increased basal heat detection and exacerbated thermal hyperalgesia compared with wild-type littermate controls during neuropathic and chronic inflammatory pain. Electrophysiologic recordings of DRG neurons from Slick KO mice revealed that Slick channels contribute to outward current, propensity to fire action potentials (APs), and to AP properties. Our data suggest that Slick channels restrain the excitability of CGRP-containing neurons, diminishing pain behavior after inflammation and injury.

Fluid mixing in droplet-based microfluidics with T junction and convergent-divergent sinusoidal microchannels.

PubMed

Yang, Li; Li, Shanshan; Liu, Jixiao; Cheng, Jingmeng

2018-02-01

To explore and utilize the advantages of droplet-based microfluidics, hydrodynamics, and mixing process within droplets traveling though the T junction channel and convergent-divergent sinusoidal microchannels are studied by numerical simulations and experiments, respectively. In the T junction channel, the mixing efficiency is significantly influenced by the twirling effect, which controls the initial distributions of the mixture during the droplet formation stage. Therefore, the internal recirculating flow can create a convection mechanism, thus improving mixing. The twirling effect is noticeably influenced by the velocity of the continuous phase; in the sinusoidal channel, the Dean vortices and droplet deformation are induced by centrifugal force and alternative velocity gradient, thus enhancing the mixing efficiency. The best mixing occurred when the droplet size is comparable with the channel width. Finally, we propose a unique optimized structure, which includes a T junction inlet joined to a sinusoidal channel. In this structure, the mixing of fluids in the droplets follows two routes: One is the twirling effect and symmetric recirculation flow in the straight channel. The other is the asymmetric recirculation and droplet deformation in the winding and variable cross-section. Among the three structures, the optimized structure has the best mixing efficiency at the shortest mixing time (0.25 ms). The combination of the twirling effect, variable cross-section effect, and Dean vortices greatly intensifies the chaotic flow. This study provides the insight of the mixing process and may benefit the design and operations of droplet-based microfluidics. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Channel Responses and Hydromodification in Southern California

NASA Astrophysics Data System (ADS)

Hawley, R. J.; Dust, D. W.; Bledsoe, B. P.

2007-12-01

Hydromodification (changes in watershed hydrologic characteristics, and the resulting hydraulics and channel forms due to urbanization) is ubiquitous in Southern California. In this region, the effects of hydromodification are driven and compounded by the arid/semiarid climate, high relief, erodible soils, high urbanization rates, and relatively low frequency of retention/detention. We conducted a preliminary survey of over 50 stream reaches along a gradient from least disturbed to fully urbanized. All stages of the Channel Evolution Model (CEM) of Schumm et al. (1984) were observed, from stable to degrading, widening, aggrading, and quasi-equilibrium channels. Several sites have CEM stages II through V in close proximity due to headcutting, hardpoints, and infrastructure. We also observed channels in undeveloped watersheds impacted by downstream urbanization via headcutting. A range of intervention measures was observed, with the frequent evolutionary endpoint as a concrete engineered flood control channel. We also observed multiple channel evolution sequences that deviate from the CEM for single-thread, incising channels. An alternative channel response, particularly on smaller urbanized streams is a stabilized, vegetation encroached low-flow channel with regular baseflow supplied by residential irrigation runoff. The limited cases of unimpacted streams that remain tend to be high gradient, high energy systems that are naturally proximate to the transition between braided and meandering form for a given sediment size.

Demonstration and Field Evaluation of Streambank Stabilization with Submerged Vanes

USGS Publications Warehouse

Whitman, H.; Hoopes, J.; Poggi, D.; Fitzpatrick, F.; Walz, K.; ,

2001-01-01

The effectiveness of submerged vanes for reducing bank erosion and improving aquatic habitat is being evaluated at a site on North Fish Creek, a Lake Superior tributary. Increased runoff from agricultural areas with clayey soils has increased flood magnitudes and the erosion potential/transport capacity of the stream. Most of the creek's sediment load originates from the erosion of 17 large bluffs. This creek contains important recreational fisheries that are potentially limited by the loss of aquatic habitat from deposition of sediment on spawning beds. Submerged vanes are a cost effective and environmentally less intrusive alternative to traditional structural stabilization measures. Submerged vanes protrude from a channel bed, are oriented at an angle to the local velocity, and are distributed along a portion of channel. They induce a transverse force and torque on the flow along with longitudinal vortexes that alter the cross sectional shape and alignment of the channel. Submerged vanes were installed at a bluff/bend site in summer and fall 2000. The number, size, and layout of the vanes were based upon the channel morphology under estimated bankfull conditions. The effectiveness of the vanes will be evaluated by comparing surveys of the bluff face, streamflow, and channel conditions for several years after installation of the submerged vanes with surveys before and immediately after their installation.

A cost-effective laser scanning method for mapping stream channel geometry and roughness

NASA Astrophysics Data System (ADS)

Lam, Norris; Nathanson, Marcus; Lundgren, Niclas; Rehnström, Robin; Lyon, Steve

2015-04-01

In this pilot project, we combine an Arduino Uno and SICK LMS111 outdoor laser ranging camera to acquire high resolution topographic area scans for a stream channel. The microprocessor and imaging system was installed in a custom gondola and suspended from a wire cable system. To demonstrate the systems capabilities for capturing stream channel topography, a small stream (< 2m wide) in the Krycklan Catchment Study was temporarily diverted and scanned. Area scans along the stream channel resulted in a point spacing of 4mm and a point cloud density of 5600 points/m2 for the 5m by 2m area. A grain size distribution of the streambed material was extracted from the point cloud using a moving window, local maxima search algorithm. The median, 84th and 90th percentiles (common metrics to describe channel roughness) of this distribution were found to be within the range of measured values while the largest modelled element was approximately 35% smaller than its measured counterpart. The laser scanning system captured grain sizes between 30mm and 255mm (coarse gravel/pebbles and boulders based on the Wentworth (1922) scale). This demonstrates that our system was capable of resolving both large-scale geometry (e.g. bed slope and stream channel width) and small-scale channel roughness elements (e.g. coarse gravel/pebbles and boulders) for the study area. We further show that the point cloud resolution is suitable for estimating ecohydraulic parameters such as Manning's n and hydraulic radius. Although more work is needed to fine-tune our system's design, these preliminary results are encouraging, specifically for those with a limited operational budget.

Continuous internal channels formed in aluminum fusion welds

NASA Technical Reports Server (NTRS)

Gault, J.; Sabo, W.

1967-01-01

Process produces continuous internal channel systems on a repeatable basis in 2014-T6 aluminum. Standard machining forms the initial channel, which is filled with tungsten carbide powder. TIG machine fusion welding completes formation of the channel. Chem-mill techniques enlarge it to the desired size.

Microfluidic measurement for blood flow and platelet adhesion around a stenotic channel: Effects of tile size on the detection of platelet adhesion in a correlation map

PubMed Central

Jung, Sung Yong; Yeom, Eunseop

2017-01-01

Platelet aggregation affects the surrounding blood flow and usually occurs where a blood vessel is narrowed as a result of atherosclerosis. The relationship between blood flow and platelet aggregation is not yet fully understood. This study proposes a microfluidic method to measure the velocity and platelet aggregation simultaneously by combining the micro-particle image velocimetry technique and a correlation mapping method. The blood flow and platelet adhesion procedure in a stenotic micro-channel with 90% severity were observed for a relatively long period of 4 min. In order to investigate the effect of tile size on the detection of platelet adhesion, 2D correlation coefficients were evaluated with binary images obtained by manual labeling and the correlation mapping method with different sizes of the square tile ranging from 3 to 50 pixels. The maximum 2D correlation coefficient occurred with the optimum tile size of 5 × 5 pixels. Since the blood flow and platelet aggregation are mutually influenced by each other, blood flow and platelet adhesion were continuously varied. When there was no platelet adhesion (t = 0 min), typical blood flow is observed. The blood flow passes through the whole channel smoothly, and jet-like flow occurs in the post-stenosis region. However, the flow pattern changes when platelet adhesion starts at the stenosis apex and after the stenosis. These adhesions induce narrow high velocity regions to become wider over a range of area from upstream to downstream of the stenosis. Separated jet-like flows with two high velocity regions are also created. The changes in flow patterns may alter the patterns of platelet adhesion. As the area of the plate adhesion increases, the platelets plug the micro-channel and there is only a small amount of blood flow, finally. The microfluidic method could provide new insights for better understanding of the interactions between platelet aggregation and blood flow in various physiological conditions. PMID:28798854

Microfluidic measurement for blood flow and platelet adhesion around a stenotic channel: Effects of tile size on the detection of platelet adhesion in a correlation map.

PubMed

Jung, Sung Yong; Yeom, Eunseop

2017-03-01

Platelet aggregation affects the surrounding blood flow and usually occurs where a blood vessel is narrowed as a result of atherosclerosis. The relationship between blood flow and platelet aggregation is not yet fully understood. This study proposes a microfluidic method to measure the velocity and platelet aggregation simultaneously by combining the micro-particle image velocimetry technique and a correlation mapping method. The blood flow and platelet adhesion procedure in a stenotic micro-channel with 90% severity were observed for a relatively long period of 4 min. In order to investigate the effect of tile size on the detection of platelet adhesion, 2D correlation coefficients were evaluated with binary images obtained by manual labeling and the correlation mapping method with different sizes of the square tile ranging from 3 to 50 pixels. The maximum 2D correlation coefficient occurred with the optimum tile size of 5 × 5 pixels. Since the blood flow and platelet aggregation are mutually influenced by each other, blood flow and platelet adhesion were continuously varied. When there was no platelet adhesion (t = 0 min), typical blood flow is observed. The blood flow passes through the whole channel smoothly, and jet-like flow occurs in the post-stenosis region. However, the flow pattern changes when platelet adhesion starts at the stenosis apex and after the stenosis. These adhesions induce narrow high velocity regions to become wider over a range of area from upstream to downstream of the stenosis. Separated jet-like flows with two high velocity regions are also created. The changes in flow patterns may alter the patterns of platelet adhesion. As the area of the plate adhesion increases, the platelets plug the micro-channel and there is only a small amount of blood flow, finally. The microfluidic method could provide new insights for better understanding of the interactions between platelet aggregation and blood flow in various physiological conditions.

Predicting the Rate of River Bank Erosion Caused by Large Wood Log

NASA Astrophysics Data System (ADS)

Zhang, N.; Rutherfurd, I.; Ghisalberti, M.

2016-12-01

When a single tree falls into a river channel, flow is deflected and accelerated between the tree roots and the bank face, increasing shear stress and scouring the bank. The scallop shaped erosion increases the diversity of the channel morphology, but also causes concern for adjacent landholders. Concern about increased bank erosion is one of the main reasons for large wood to still be removed from channels in SE Australia. Further, the hydraulic effect of many logs in the channel can reduce overall bank erosion rates. Although both phenomena have been described before, this research develops a hydraulic model that estimates their magnitude, and tests and calibrates this model with flume and field measurements, with logs with various configurations and sizes. Specifically, the model estimates the change in excess shear stress on the bank associated . The model addresses the effect of the log angle, distance from bank, and log size and flow condition by solving the mass continuity and energy conservation between the cross section at the approaching flow and contracted flow. Then, we evaluate our model against flume experiment preformed with semi-realistic log models to represent logs in different sizes and decay stages by comparing the measured and simulated velocity increase in the gap between the log and the bank. The log angle, distance from bank, and flow condition are systemically varied for each log model during the experiment. Final, the calibrated model is compared with the field data collected in anabranching channels of Murray River in SE Australia where there are abundant instream logs and regulated and consistent high flow for irrigation. Preliminary results suggest that a log can significantly increase the shear stress on the bank, especially when it positions perpendicular to the flow. The shear stress increases with the log angle in a rising curve (The log angle is the angle between log trunk and flow direction. 0o means log is parallel to flow with canopy pointing downstream). However, the shear stress shows insignificant changes as the log is being moved close to the bank.

Ultrahigh-resolution CT and DR scanner

NASA Astrophysics Data System (ADS)

DiBianca, Frank A.; Gupta, Vivek; Zou, Ping; Jordan, Lawrence M.; Laughter, Joseph S.; Zeman, Herbert D.; Sebes, Jeno I.

1999-05-01

A new technique called Variable-Resolution X-ray (VRX) detection that dramatically increases the spatial resolution in computed tomography (CT) and digital radiography (DR) is presented. The technique is based on a principle called 'projective compression' that allows the resolution element of a CT detector to scale with the subject or field size. For very large (40 - 50 cm) field sizes, resolution exceeding 2 cy/mm is possible and for very small fields, microscopy is attainable with resolution exceeding 100 cy/mm. Several effects that could limit the performance of VRX detectors are considered. Experimental measurements on a 16-channel, CdWO4 scintillator + photodiode test array yield a limiting MTF of 64 cy/mm (8(mu) ) in the highest-resolution configuration reported. Preliminary CT images have been made of small anatomical specimens and small animals using a storage phosphor screen in the VRX mode. Measured detector resolution of the CT projection data exceeds 20 cy/mm (less than 25 (mu) ); however, the final, reconstructed CT images produced thus far exhibit 10 cy/mm (50 (mu) ) resolution because of non-flatness of the storage phosphor plates, focal spot effects and the use of a rudimentary CT reconstruction algorithm. A 576-channel solid-state detector is being fabricated that is expected to achieve CT image resolution in excess of that of the 26-channel test array.

Riparian vegetation controls on channels formed in non-cohesive sediment

NASA Astrophysics Data System (ADS)

Gran, K.; Tal, M.; Paola, C.

2002-05-01

Riparian vegetation can significantly influence the morphology of a river, affecting channel geometry and flow dynamics. In channels formed in non-cohesive material, vegetation is the main source of bank cohesion and could affect the overall behavior of the river, potentially constraining the flow from a multi-thread channel to a single-thread channel. To examine the effects of riparian vegetation on streams formed in non-cohesive material, we conducted a series of physical experiments at the St. Anthony Falls Laboratory. The first set of experiments examines the effects of varying densities of vegetation on braided stream dynamics. Water discharge, sediment discharge, and grain size were held constant. For each run, we allowed a braided system to develop, then halved the discharge, and seeded the flume with alfalfa (Medicago sativa). After ten to fourteen days of growth, we returned the discharge to its original value and continued the run for 30-36 hours. Our results show that the influence of vegetation on the overall river pattern varied systematically with the spatial density of plant stems. The vegetation reduced the number of active channels and increased bank stability, leading to lower lateral migration rates, narrower and deeper channels, and an increase in channel relief. All these effects increased with vegetation density. Vegetation also influenced flow dynamics, increasing the variance of flow direction in the vegetated runs, and increasing scour depths through strong downwelling where the flow collided with relatively resistant banks. This oblique bank collision provides a new mechanism for producing secondary flows. We found these bank collision driven secondary flows to be more important than the classical curvature-driven mechanism in the vegetated runs. The next set of experiments examines more closely how the channel pattern evolves through time, allowing for both channel migration and successive vegetation growth. In these on-going experiments, vegetation is reseeded following repeat high flow events, simulating the natural process of vegetation encroachment on the floodplain and channel.

Effects of a graded partial-harvest on hybrid catfish size variation

USDA-ARS?s Scientific Manuscript database

Hybrid Catfish have quickly become a major contributor to ictalurid catfish aquaculture in the United States. Hybrid Catfish have unique production characteristics compared with Channel Catfish, and rapid farmer adoption of the hybrid has outpaced research on appropriate management practices. This s...

Radio Implementation of a Testbed For Cognitive Radio Source Localization Using USRPS and GNU Radio

DTIC Science & Technology

2014-09-01

average received energy F FFT vector size FS sampling rate g gain h channel attenuation H0 hypothesis 0 H1 hypothesis 1 I in-phase L packet size...Amplitude Modulation (QAM)). The baseband signal is then sent to the USRP in the form of in-phase (I) and quadrature (Q) complex samples to be further... sampling rate defines the bandwidth of the transmitted signal, which must be less than the channel separation to give non- overlapping channels. The FFT

Performance Analysis of Amplify-and-Forward Relaying FSO/SC-QAM Systems over Weak Turbulence Channels and Pointing Error Impairments

NASA Astrophysics Data System (ADS)

Trung, Ha Duyen

2017-12-01

In this paper, the end-to-end performance of free-space optical (FSO) communication system combining with Amplify-and-Forward (AF)-assisted or fixed-gain relaying technology using subcarrier quadrature amplitude modulation (SC-QAM) over weak atmospheric turbulence channels modeled by log-normal distribution with pointing error impairments is studied. More specifically, unlike previous studies on AF relaying FSO communication systems without pointing error effects; the pointing error effect is studied by taking into account the influence of beamwidth, aperture size and jitter variance. In addition, a combination of these models to analyze the combined effect of atmospheric turbulence and pointing error to AF relaying FSO/SC-QAM systems is used. Finally, an analytical expression is derived to evaluate the average symbol error rate (ASER) performance of such systems. The numerical results show that the impact of pointing error on the performance of AF relaying FSO/SC-QAM systems and how we use proper values of aperture size and beamwidth to improve the performance of such systems. Some analytical results are confirmed by Monte-Carlo simulations.

Effects of Atmospheric Water Vapor and Clouds on NOAA (National Oceanic and Atmospheric Administration) AVHRR (Advanced Very High Resolution Radiometer) Satellite Data.

DTIC Science & Technology

1984-07-01

aerosols and sub pixel-sized clouds all tend to increase Channel 1 with respect to Channel 2 and reduce the computed VIN. Further, the Guide states that... computation of the VIN. Large scale cloud contamination of pixels, while diffi- cult to correct for, can at least be monitored and affected pixels...techniques have been developed for computer cloud screening. See, for example, Horvath et al. (1982), Gray and McCrary (1981a) and Nixon et al. (1983

Optical Thickness and Effective Radius Retrievals of Liquid Water Clouds over Ice and Snow Surface

NASA Technical Reports Server (NTRS)

Platnick, S.; King, M. D.; Tsay, S.-C.; Arnold, G. T.; Gerber, H.; Hobbs, P. V.; Rangno, A.

1999-01-01

Cloud optical thickness and effective radius retrievals from solar reflectance measurements traditionally depend on a combination of spectral channels that are absorbing and non-absorbing for liquid water droplets. Reflectances in non-absorbing channels (e.g., 0.67, 0.86 micrometer bands) are largely dependent on cloud optical thickness, while longer wavelength absorbing channels (1.6, 2.1, and 3.7 micrometer window bands) provide cloud particle size information. Retrievals are complicated by the presence of an underlying ice/snow surface. At the shorter wavelengths, sea ice is both bright and highly variable, significantly increasing cloud retrieval uncertainty. However, reflectances at the longer wavelengths are relatively small and may be comparable to that of dark open water. Sea ice spectral albedos derived from Cloud Absorption Radiometer (CAR) measurements during April 1992 and June 1995 Arctic field deployments are used to illustrate these statements. A modification to the traditional retrieval technique is devised. The new algorithm uses a combination of absorbing spectral channels for which the snow/ice albedo is relatively small. Using this approach, preliminary retrievals have been made with the MODIS Airborne Simulator (MAS) imager flown aboard the NASA ER-2 during FIRE-ACE. Data from coordinated ER-2 and University of Washington CV-580 aircraft observations of liquid water stratus clouds on June 3 and June 6, 1998 have been examined. Size retrievals are compared with in situ cloud profile measurements of effective radius made with the CV-580 PMS FSSP probe, and optical thickness retrievals are compared with extinction profiles derived from the Gerber Scientific "g-meter" probe. MAS retrievals are shown to be in good agreement with the in situ measurements.

Compressible liquid flow in nano- or micro-sized circular tubes considering wall-liquid Lifshitz-van der Waals interaction

NASA Astrophysics Data System (ADS)

Zhang, Xueling; Zhu, Weiyao; Cai, Qiang; Shi, Yutao; Wu, Xuehong; Jin, Tingxiang; Yang, Lianzhi; Song, Hongqing

2018-06-01

Although nano- and micro-scale phenomena for fluid flows are ubiquitous in tight oil reservoirs or in nano- or micro-sized channels, the mechanisms behind them remain unclear. In this study, we consider the wall-liquid interaction to investigate the flow mechanisms behind a compressible liquid flow in nano- or micro-sized circular tubes. We assume that the liquid is attracted by the wall surface primarily by the Lifshitz-van der Waals (LW) force, whereas electrostatic forces are negligible. The long-range LW force is thus introduced into the Navier-Stokes equations. The nonlinear equations of motion are decoupled by using the hydrodynamic vorticity-stream functions, from which an approximate analytical perturbation solution is obtained. The proposed model considers the LW force and liquid compressibility to obtain the velocity and pressure fields, which are consistent with experimentally observed micro-size effects. A smaller tube radius implies smaller dimensionless velocity, and when the tube radius decreases to a certain radius Rm, a fluid no longer flows, where Rm is the lower limit of the movable-fluid radius. The radius Rm is calculated, and the results are consistent with previous experimental results. These results reveal that micro-size effects are caused by liquid compressibility and wall-liquid interactions, such as the LW force, for a liquid flowing in nano- or micro-sized channels or pores. The attractive LW force enhances the flow's radial resistance, and the liquid compressibility transmits the radial resistance to the streaming direction via volume deformation, thereby decreasing the streaming velocity.

Control of Sediment Availability on the Path of Channel Recovery in Bedload-Dominated Rivers

NASA Astrophysics Data System (ADS)

Doyle, H.; Renshaw, C. E.; Magilligan, F. J.

2015-12-01

Following a disturbance, a channel can recover to an equilibrium form by adjusting its slope, width, depth, grain size, or some combination of these dimensions that define the recovery path. In this study we relate the channel recovery path to the quantity and caliber of sediment introduced due to dam construction/removal or erosion caused by flooding. We suggest that the recovery path of a channel depends on the availability of sediment of a size that is transported as bedload during bankfull flows (the "mobile fraction"). We define a ratio, S*, of the sediment volume added to the channel because of the disturbance to the average annual sediment flux. We compare S* values to the recovery path of New England gravel-bedded streams following two dam emplacements and removals and flooding related to Tropical Storm Irene. Pelham Dam in Pelham, MA (removed 2012) and Kendrick Dam in Pittsford, VT (removed 2014) were on similar streams: drainage areas ~25 km2, slopes 1-2%, and bankfull widths ~10 m. Sediment was excavated from both impoundments prior to removal, resulting in lower S* values. Irene-affected study sites are on ~10 gravel-bedded streams in VT, NH, and MA. Sediment input at these sites is due to bank failures and landslides, many of which continue to supply sediment to the channel four years after flooding. To track recovery we collected annual topographic and sediment size data and calculated Shields numbers to determine if channels had reached an equilibrium form. We define equilibrium for bedload rivers as Shields numbers at bankfull discharge equal to that required to initiate bedload transport. Following dam emplacements the channels failed to recover because mobile sediment was unavailable. Fining dominated the recovery at Irene-affected sites (~10% reduction in sediment size) and dam removal sites (up to 30-60% reduction) with little post-disturbance change in channel geometry, possibly due to the limited mobile fraction.

Micro Fluidic Channel Machining on Fused Silica Glass Using Powder Blasting

PubMed Central

Jang, Ho-Su; Cho, Myeong-Woo; Park, Dong-Sam

2008-01-01

In this study, micro fluid channels are machined on fused silica glass via powder blasting, a mechanical etching process, and the machining characteristics of the channels are experimentally evaluated. In the process, material removal is performed by the collision of micro abrasives injected by highly compressed air on to the target surface. This approach can be characterized as an integration of brittle mode machining based on micro crack propagation. Fused silica glass, a high purity synthetic amorphous silicon dioxide, is selected as a workpiece material. It has a very low thermal expansion coefficient and excellent optical qualities and exceptional transmittance over a wide spectral range, especially in the ultraviolet range. The powder blasting process parameters affecting the machined results are injection pressure, abrasive particle size and density, stand-off distance, number of nozzle scanning, and shape/size of the required patterns. In this study, the influence of the number of nozzle scanning, abrasive particle size, and pattern size on the formation of micro channels is investigated. Machined shapes and surface roughness are measured using a 3-dimensional vision profiler and the results are discussed. PMID:27879730

River sedimentation and channel bed characteristics in northern Ethiopia

NASA Astrophysics Data System (ADS)

Demissie, Biadgilgn; Billi, Paolo; Frankl, Amaury; Haile, Mitiku; Lanckriet, Sil; Nyssen, Jan

2016-04-01

Excessive sedimentation and flood hazard are common in ephemeral streams which are characterized by flashy floods. The purposes of this study was to investigate the temporal variability of bio-climatic factors in controlling sediment supply to downstream channel reaches and the effect of bridges on local hydro-geomorphic conditions in causing the excess sedimentation and flood hazard in ephemeral rivers of the Raya graben (northern Ethiopia). Normalized Difference Vegetation Index (NDVI) was analyzed for the study area using Landsat imageries of 1972, 1986, 2000, 2005, 2010, and 2012). Middle term, 1993-2011, daily rainfall data of three meteorological stations, namely, Alamata, Korem and Maychew, were considered to analyse the temporal trends and to calculate the return time intervals of rainfall intensity in 24 hours for 2, 5, 10 and 20 years using the log-normal and the Gumbel extreme events method. Streambed gradient and bed material grain size were measured in 22 river reaches (at bridges and upstream). In the study catchments, the maximum NDVI values were recorded in the time interval from 2000 to 2010, i.e. the decade during which the study bridges experienced the most severe excess sedimentation problems. The time series analysis for a few rainfall parameters do not show any evidence of rainfall pattern accountable for an increase in sediment delivery from the headwaters nor for the generation of higher floods with larger bedload transport capacities. Stream bed gradient and bed material grain size data were measured in order to investigate the effect of the marked decrease in width from the wide upstream channels to the narrow recently constructed bridges. The study found the narrowing of the channels due to the bridges as the main cause of the thick sedimentation that has been clogging the study bridges and increasing the frequency of overbank flows during the last 15 years. Key terms: sedimentation, ephemeral streams, sediment size, bridge clogging

Coupling MAST-1D, a sediment routing model for channel-floodplain complexes, with channel migration relationships to predict reach-averaged river morphodynamics. Preliminary results

NASA Astrophysics Data System (ADS)

Viparelli, E.; Eke, E. C.; Lauer, J. W.

2017-12-01

Sediment exchange between the channel and floodplain can occur via meander migration, overbank deposition or erosion, and changes in channel geometry. Depending on channel and floodplain history, floodplains can act either as sources or sinks of bed material and/or wash load. Here we present preliminary modeling results that explicitly account for the feedbacks between the changes in floodplain geometry and sediment size distribution and the changes in channel geometry and migration. These results are obtained by coupling the Morphodynamics And Sediment Tracers in 1D (MAST-1D) program with the results of meander migration studies linking the bankfull flow depth and mean velocity to channel migration, sinuosity and channel geometry. MAST-1D is a numerical model built to describe grain size specific transport of sediment and tracers and the long-term - i.e. decadal and longer - evolution of channel floodplain complexes. MAST-1D differs from other 1D numerical models because it allows for 1) uneven exchange of sediment and tracers between the river channel and the floodplain, 2) temporal changes in channel geometry, bed elevation and floodplain thickness, which result in changes in the channel hydraulic capacity, and 3) temporal changes of size distribution and tracer content in the floodplain, in the load and in the underlying substrate. Under conditions of constant base level, water and sediment supply, the system evolves toward a steady state wherein the amount of sediment deposited through point bar deposition and overbank sedimentation is balanced by the erosion of sediment from the floodplain through lateral migration. The current formulation couples MAST-1D with empirical channel migration relationships that link bankfull flow depth and mean velocity to channel migration, sinuosity and channel geometry. Future development of this preliminary work will involve a fully coupled MAST-1D model with a standard meander migration model that will allow for the building of floodplain stratigraphy and tracking of the position of the meandering channel in space and time.

Molecular mechanism underlying ethanol activation of G-protein–gated inwardly rectifying potassium channels

PubMed Central

Bodhinathan, Karthik; Slesinger, Paul A.

2013-01-01

Alcohol (ethanol) produces a wide range of pharmacological effects on the nervous system through its actions on ion channels. The molecular mechanism underlying ethanol modulation of ion channels is poorly understood. Here we used a unique method of alcohol-tagging to demonstrate that alcohol activation of a G-protein–gated inwardly rectifying potassium (GIRK or Kir3) channel is mediated by a defined alcohol pocket through changes in affinity for the membrane phospholipid signaling molecule phosphatidylinositol 4,5-bisphosphate. Surprisingly, hydrophobicity and size, but not the canonical hydroxyl, were important determinants of alcohol-dependent activation. Altering levels of G protein Gβγ subunits, conversely, did not affect alcohol-dependent activation, suggesting a fundamental distinction between receptor and alcohol gating of GIRK channels. The chemical properties of the alcohol pocket revealed here might extend to other alcohol-sensitive proteins, revealing a unique protein microdomain for targeting alcohol-selective therapeutics in the treatment of alcoholism and addiction. PMID:24145411

Size-dependent forced PEG partitioning into channels: VDAC, OmpC, and α-hemolysin

DOE PAGES

Aksoyoglu, M. Alphan; Podgornik, Rudolf; Bezrukov, Sergey M.; ...

2016-07-27

Nonideal polymer mixtures of PEGs of different molecular weights partition differently into nanosize protein channels. Here, we assess the validity of the recently proposed theoretical approach of forced partitioning for three structurally different beta-barrel channels: voltage-dependent anion channel from outer mitochondrial membrane VDAC, bacterial porin OmpC (outer membrane protein C), and bacterial channel-forming toxin alpha-hemolysin. Our interpretation is based on the idea that relatively less-penetrating polymers push the more easily penetrating ones into nanosize channels in excess of their bath concentration. Comparison of the theory with experiments is excellent for VDAC. Polymer partitioning data for the other two channels aremore » consistent with theory if additional assumptions regarding the energy penalty of pore penetration are included. In conclusion, the obtained results demonstrate that the general concept of "polymers pushing polymers" is helpful in understanding and quantification of concrete examples of size-dependent forced partitioning of polymers into protein nanopores.« less

Size-dependent forced PEG partitioning into channels: VDAC, OmpC, and α-hemolysin

PubMed Central

Aksoyoglu, M. Alphan; Podgornik, Rudolf; Bezrukov, Sergey M.; Gurnev, Philip A.; Muthukumar, Murugappan; Parsegian, V. Adrian

2016-01-01

Nonideal polymer mixtures of PEGs of different molecular weights partition differently into nanosize protein channels. Here, we assess the validity of the recently proposed theoretical approach of forced partitioning for three structurally different β-barrel channels: voltage-dependent anion channel from outer mitochondrial membrane VDAC, bacterial porin OmpC (outer membrane protein C), and bacterial channel-forming toxin α-hemolysin. Our interpretation is based on the idea that relatively less-penetrating polymers push the more easily penetrating ones into nanosize channels in excess of their bath concentration. Comparison of the theory with experiments is excellent for VDAC. Polymer partitioning data for the other two channels are consistent with theory if additional assumptions regarding the energy penalty of pore penetration are included. The obtained results demonstrate that the general concept of “polymers pushing polymers” is helpful in understanding and quantification of concrete examples of size-dependent forced partitioning of polymers into protein nanopores. PMID:27466408

On the Structural Basis for Size-selective Permeation of Organic Cations through the Voltage-gated Sodium Channel

PubMed Central

Sun, Ye-Ming; Favre, Isabelle; Schild, Laurent; Moczydlowski, Edward

1997-01-01

Recent evidence indicates that ionic selectivity in voltage-gated Na+ channels is mediated by a small number of residues in P-region segments that link transmembrane elements S5 and S6 in each of four homologous domains denoted I, II, III, and IV. Important determinants for this function appear to be a set of conserved charged residues in the first three homologous domains, Asp(I), Glu(II), and Lys(III), located in a region of the pore called the DEKA locus. In this study, we examined several Ala-substitution mutations of these residues for alterations in ionic selectivity, inhibition of macroscopic current by external Ca2+ and H+, and molecular sieving behavior using a series of organic cations ranging in size from ammonium to tetraethylammonium. Whole-cell recording of wild-type and mutant channels of the rat muscle μ1 Na+ channel stably expressed in HEK293 cells was used to compare macroscopic current–voltage behavior in the presence of various external cations and an intracellular reference solution containing Cs+ and very low Ca2+. In particular, we tested the hypothesis that the Lys residue in domain III of the DEKA locus is responsible for restricting the permeation of large organic cations. Mutation of Lys(III) to Ala largely eliminated selectivity among the group IA monovalent alkali cations (Li+, Na+, K+, Rb+, Cs+) and permitted inward current of group IIA divalent cations (Mg2+, Ca2+, Sr2+, Ba2+). This same mutation also resulted in the acquisition of permeability to many large organic cations such as methylammonium, tetramethylammonium, and tetraethylammonium, all of which are impermeant in the native channel. The results lead to the conclusion that charged residues of the DEKA locus play an important role in molecular sieving behavior of the Na+ channel pore, a function that has been previously attributed to a hypothetical region of the channel called the “selectivity filter.” A detailed examination of individual contributions of the Asp(I), Glu(II), and Lys(III) residues and the dependence on molecular size suggests that relative permeability of organic cations is a complex function of the size, charge, and polarity of these residues and cation substrates. As judged by effects on macroscopic conductance, charged residues of the DEKA locus also appear to play a role in the mechanisms of block by external Ca2+ and H+, but are not essential for the positive shift in activation voltage that is produced by these ions. PMID:9382897

Computational study of graphene-based vertical field effect transistor

NASA Astrophysics Data System (ADS)

Chen, Wenchao; Rinzler, Andrew; Guo, Jing

2013-03-01

Poisson and drift-diffusion equations are solved in a three-dimensional device structure to simulate graphene-based vertical field effect transistors (GVFETs). Operation mechanisms of the GVFET with and without punched holes in the graphene source contact are presented and compared. The graphene-channel Schottky barrier can be modulated by gate electric field due to graphene's low density of states. For the graphene contact with punched holes, the contact barrier thinning and lowering around punched hole edge allow orders of magnitude higher tunneling current compared to the region away from the punched hole edge, which is responsible for significant performance improvement as already verified by experiments. Small hole size is preferred due to less electrostatic screening from channel inversion layer, which gives large electric field around the punched hole edge, thus, leading to a thinner and lower barrier. Bilayer and trilayer graphenes as the source contact degrade the performance improvement because stronger electrostatic screening leads to smaller contact barrier lowering and thinning. High punched hole area percentage improves current performance by allowing more gate electric field to modulate the graphene-channel barrier. Low effective mass channel material gives better on-off current ratio.

Adsorption of methane on Zn(bdc)(ted)0.5 microporous metal-organic framework

NASA Astrophysics Data System (ADS)

Krungleviciute, Vaiva; Pramanik, Sanhita; Migone, Aldo; Li, Jing

2011-03-01

Zn(bdc)(ted)0.5 is metal-organic framework crystallized in a tetragonal space group with a 3D porous structure containing intersecting channels of two different sizes. The larger channels are parallel to the c axis and have a cross section 7.5 × 7.5 AA. The smaller channels are along both the a- and b-axes and have a cross section of 4.8 × 3.2 AA. We measured methane adsorption isotherms at several different temperatures between 82 and 102 K. We calculated the effective specific surface area, isosteric heat and binding energy values. Two distinct substeps were observed in the isotherms corresponding to two different adsorption sites. The origin of the substeps will be discussed.

Preparation of monodisperse PEG hydrogel composite microspheres via microfluidic chip with rounded channels

NASA Astrophysics Data System (ADS)

Yu, Bing; Cong, Hailin; Liu, Xuesong; Ren, Yumin; Wang, Jilei; Zhang, Lixin; Tang, Jianguo; Ma, Yurong; Akasaka, Takeshi

2013-09-01

An effective microfluidic method to fabricate monodisperse polyethylene glycol (PEG) hydrogel composite microspheres with tunable dimensions and properties is reported in this paper. A T-junction microfluidic chip equipped with rounded channels and online photopolymerization system is applied for the microsphere microfabrication. The shape and size of the microspheres are well controlled by the rounded channels and PEG prepolymer/silicon oil flow rate ratios. The obtained PEG/aspirin composite microspheres exhibit a sustained release of aspirin for a wide time range; the obtained PEG/Fe3O4 nanocomposite microspheres exhibit excellent magnetic properties; and the obtained binary PEG/dye composite microspheres show the ability to synchronously load two functional components in the same peanut-shaped or Janus hydrogel particles.

Dielectric Self-Energy in Poisson-Boltzmann and Poisson-Nernst-Planck Models of Ion Channels

PubMed Central

Corry, Ben; Kuyucak, Serdar; Chung, Shin-Ho

2003-01-01

We demonstrated previously that the two continuum theories widely used in modeling biological ion channels give unreliable results when the radius of the conduit is less than two Debye lengths. The reason for this failure is the neglect of surface charges on the protein wall induced by permeating ions. Here we attempt to improve the accuracy of the Poisson-Boltzmann and Poisson-Nernst-Planck theories, when applied to channel-like environments, by including a specific dielectric self-energy term to overcome spurious shielding effects inherent in these theories. By comparing results with Brownian dynamics simulations, we show that the inclusion of an additional term in the equations yields significant qualitative improvements. The modified theories perform well in very wide and very narrow channels, but are less successful at intermediate sizes. The situation is worse in multi-ion channels because of the inability of the continuum theories to handle the ion-to-ion interactions correctly. Thus, further work is required if these continuum theories are to be reliably salvaged for quantitative studies of biological ion channels in all situations. PMID:12770869

Evaluation of CAESAR-Lisflood as a tool for modelling river channel change and floodplain sediment residence times.

NASA Astrophysics Data System (ADS)

Feeney, Christopher; Smith, Hugh; Chiverrell, Richard; Hooke, Janet; Cooper, James

2017-04-01

Sediment residence time represents the duration of particle storage, from initial deposition to remobilisation, within reservoirs such as floodplains. Residence time influences rates of downstream redistribution of sediment and associated contaminants and is a useful indicator of landform stability and hence, preservation potential of alluvial archives of environmental change. River channel change controls residence times, reworking sediments via lateral migration, avulsion and incision through floodplain deposits. As reworking progresses, the floodplain age distribution is 'updated', reflecting the time since 'older' sediments were removed and replaced with 'younger' ones. The relationship between ages and the spatial extents they occupy can be used to estimate the average floodplain sediment residence times. While dating techniques, historic maps and remote sensing can reconstruct age distributions from historic reworking, modelling provides advantages, including: i) capturing detailed river channel changes and resulting floodplain ages over longer timescales and higher resolutions than from historic mapping, and ii) control over inputs to simulate hypothetical scenarios to investigate the effects of different environmental drivers on residence times. CAESAR-Lisflood is a landform evolution model capable of simulating variable channel width, divergent flow, and both braided and meandering planforms. However, the model's ability to accurately simulate channel changes requires evaluation if it is to be useful for quantitative evaluation of floodplain sediment residence times. This study aims to simulate recent historic river channel changes along ten 1 km reaches in northern England. Simulation periods were defined by available overlapping historic map and mean daily flow datasets, ranging 27-39 years. LiDAR-derived 2 m DEMs were modified to smooth out present-day channels and burn in historic channel locations. To reduce run times, DEMs were resampled to coarser resolutions based on the size of the channel and historic rate of lateral channel migration. Separate pre-defined coarse and finer channel bed and floodplain grain size distributions were used, respectively, in combination with constructed reach DEMs for model simulations. Calibration was performed by modifying selected parameters to obtain best fits between observed and modelled channel planforms. Initial simulations suggest the model can broadly reproduce observed planform change and is comparable in terms of channel sinuosities and the mean radius of curvature. As such, CAESAR-Lisflood may provide a useful tool for evaluating floodplain sediment residence times under environmental change scenarios.

Sources of debris flow material in burned areas

USGS Publications Warehouse

Santi, P.M.; deWolfe, V.G.; Higgins, J.D.; Cannon, S.H.; Gartner, J.E.

2008-01-01

The vulnerability of recently burned areas to debris flows has been well established. Likewise, it has been shown that many, if not most, post-fire debris flows are initiated by runoff and erosion and grow in size through erosion and scour by the moving debris flow, as opposed to landslide-initiated flows with little growth. To better understand the development and character of these flows, a study has been completed encompassing 46 debris flows in California, Utah, and Colorado, in nine different recently burned areas. For each debris flow, progressive debris production was measured at intervals along the length of the channel, and from these measurements graphs were developed showing cumulative volume of debris as a function of channel length. All 46 debris flows showed significant bulking by scour and erosion, with average yield rates for each channel ranging from 0.3 to 9.9??m3 of debris produced for every meter of channel length, with an overall average value of 2.5??m3/m. Significant increases in yield rate partway down the channel were identified in 87% of the channels, with an average of a three-fold increase in yield rate. Yield rates for short reaches of channels (up to several hundred meters) ranged as high as 22.3??m3/m. Debris was contributed from side channels into the main channels for 54% of the flows, with an average of 23% of the total debris coming from those side channels. Rill erosion was identified for 30% of the flows, with rills contributing between 0.1 and 10.5% of the total debris, with an average of 3%. Debris was deposited as levees in 87% of the flows, with most of the deposition occurring in the lower part of the basin. A median value of 10% of the total debris flow was deposited as levees for these cases, with a range from near zero to nearly 100%. These results show that channel erosion and scour are the dominant sources of debris in burned areas, with yield rates increasing significantly partway down the channel. Side channels are much more important sources of debris than rills. Levees are very common, but the size and effect on the amount of debris that reaches a canyon mouth is highly variable. ?? 2007 Elsevier B.V. All rights reserved.

Triangle singularities and XYZ quarkonium peaks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Szczepaniak, Adam P.

2015-06-01

We discuss analytical properties of partial waves derived from projection of a 4-legged amplitude with crossed-channel exchanges in the kinematic region of the direct channel that corresponds to the XYZ peaks in charmonium and bottomonium. We show that in general partial waves can develop anomalous branch points in the vicinity of the direct channel physical region. In a specific case, when these branch points lie on the opposite side of the unitary cut they pinch the integration contour in a dispersion relation and if the pinch happens close to threshold, the normal threshold cusp is enhanced. We show that this effect only occurs if masses of resonances in the crossed channel are in a specific, narrow range. We estimate the size of threshold enhancements originating from these anomalous singularities in reactions where themore » $$Z_c(3900)$$ and the $$Z_b(10610)$$ peaks have been observed.« less

Random access to mobile networks with advanced error correction

NASA Technical Reports Server (NTRS)

Dippold, Michael

1990-01-01

A random access scheme for unreliable data channels is investigated in conjunction with an adaptive Hybrid-II Automatic Repeat Request (ARQ) scheme using Rate Compatible Punctured Codes (RCPC) Forward Error Correction (FEC). A simple scheme with fixed frame length and equal slot sizes is chosen and reservation is implicit by the first packet transmitted randomly in a free slot, similar to Reservation Aloha. This allows the further transmission of redundancy if the last decoding attempt failed. Results show that a high channel utilization and superior throughput can be achieved with this scheme that shows a quite low implementation complexity. For the example of an interleaved Rayleigh channel and soft decision utilization and mean delay are calculated. A utilization of 40 percent may be achieved for a frame with the number of slots being equal to half the station number under high traffic load. The effects of feedback channel errors and some countermeasures are discussed.

Precision gap particle separator

DOEpatents

Benett, William J.; Miles, Robin; Jones, II., Leslie M.; Stockton, Cheryl

2004-06-08

A system for separating particles entrained in a fluid includes a base with a first channel and a second channel. A precision gap connects the first channel and the second channel. The precision gap is of a size that allows small particles to pass from the first channel into the second channel and prevents large particles from the first channel into the second channel. A cover is positioned over the base unit, the first channel, the precision gap, and the second channel. An port directs the fluid containing the entrained particles into the first channel. An output port directs the large particles out of the first channel. A port connected to the second channel directs the small particles out of the second channel.

The intracellular region of ClC-3 chloride channel is in a partially folded state and a monomer.

PubMed

Li, Shu Jie; Kawazaki, Masanobu; Ogasahara, Kyoko; Nakagawa, Atsushi

2006-05-01

In contrast to bacterial ClC chloride channels, all eukaryotic ClC chloride channels have a conserved long intracellular region that makes up of the carboxyl terminus of the protein and is necessary for channel functions as a channel gate. Little is known, however, about the molecular structure of the intracellular region of ClC chloride channels so far. Here, for the first time, we have expressed and purified the intracellular region of the rat ClC-3 chloride channel (C-ClC-3) as a water-soluble protein under physiological conditions, and investigated its structural characteristics and assembly behavior by means of circular dichroism (CD) spectroscopy, differential scanning calorimetry (DSC), size exclusion chromatography and analytical ultracentrifugation. The far-UV CD spectra of C-ClC-3 in the native state and in the presence of urea clearly show that the protein has a significantly folded secondary structure consisting of alpha-helices and beta-sheets, while the near-UV CD spectra and DSC experiments indicate the protein is deficient in well-defined tertiary packing. Its Stokes radius is larger than its expected size as a folded globular protein, as determined on size exclusion chromatography. Furthermore, the DisEMBL program, a useful computational tool for the prediction of disordered/unstructured regions within a protein sequence, predicts that the protein is in a partially folded state. Based on these results, we conclude that C-ClC-3 is partially folded. On the other hand, both size exclusion chromatography and sedimentation equilibrium analysis show that C-ClC-3 exists as a monomer in solution, not a dimer like the whole ClC-3 molecule.

A Solar Reflectance Method for Retrieving Cloud Optical Thickness and Droplet Size Over Snow and Ice Surfaces

NASA Technical Reports Server (NTRS)

Platnick, S.; Li, J. Y.; King, M. D.; Gerber, H.; Hobbs, P. V.

1999-01-01

Cloud optical thickness and effective radius retrievals from solar reflectance measurements are traditionally implemented using a combination of spectral channels that are absorbing and non-absorbing for water particles. Reflectances in non-absorbing channels (e.g., 0.67, 0.86, 1.2 micron spectral window bands) are largely dependent on cloud optical thickness, while longer wavelength absorbing channels (1.6, 2. 1, and 3.7 micron window bands) provide cloud particle size information. Cloud retrievals over ice and snow surfaces present serious difficulties. At the shorter wavelengths, ice is bright and highly variable, both characteristics acting to significantly increase cloud retrieval uncertainty. In contrast, reflectances at the longer wavelengths are relatively small and may be comparable to that of dark open water. A modification to the traditional cloud retrieval technique is devised. The new algorithm uses only a combination of absorbing spectral channels for which the snow/ice albedo is relatively small. Using this approach, retrievals have been made with the MODIS Airborne Simulator (MAS) imager flown aboard the NASA ER-2 from May - June 1998 during the Arctic FIRE-ACE field deployment. Data from several coordinated ER-2 and University of Washington CV-580 in situ aircraft observations of liquid water stratus clouds are examined. MAS retrievals of optical thickness, droplet effective radius, and liquid water path are shown to be in good agreement with the in situ measurements. The initial success of the technique has implications for future operational satellite cloud retrieval algorithms in polar and wintertime regions.

Development and evaluation of an acoustic device to estimate size distribution of channel catfish in commercial ponds

USDA-ARS?s Scientific Manuscript database

As one step in the continued effort to utilize acoustic methods and techniques to the betterment of catfish aquaculture, an acoustic “catfish sizer” was designed to determine the size distribution of Channel Catfish Ictalurus punctatus in commercial ponds. The catfish sizer employed a custom-built 4...

Na⁺ and K⁺ ion selectivity by size-controlled biomimetic graphene nanopores.

PubMed

Kang, Yu; Zhang, Zhisen; Shi, Hui; Zhang, Junqiao; Liang, Lijun; Wang, Qi; Ågren, Hans; Tu, Yaoquan

2014-09-21

Because biological ionic channels play a key role in cellular transport phenomena, they have attracted extensive research interest for the design of biomimetic nanopores with high permeability and selectivity in a variety of technical applications. Inspired by the structure of K(+) channel proteins, we designed a series of oxygen doped graphene nanopores of different sizes by molecular dynamics simulations to discriminate between K(+) and Na(+) channel transport. The results from free energy calculations indicate that the ion selectivity of such biomimetic graphene nanopores can be simply controlled by the size of the nanopore; compared to K(+), the smaller radius of Na(+) leads to a significantly higher free energy barrier in the nanopore of a certain size. Our results suggest that graphene nanopores with a distance of about 3.9 Å between two neighboring oxygen atoms could constitute a promising candidate to obtain excellent ion selectivity for Na(+) and K(+) ions.

Effects of the finite particle size in turbulent wall-bounded flows of dense suspensions

NASA Astrophysics Data System (ADS)

Costa, Pedro; Picano, Francesco; Brandt, Luca; Breugem, Wim-Paul

2018-05-01

We use interface-resolved simulations to study finite-size effects in turbulent channel flow of neutrally-buoyant spheres. Two cases with particle sizes differing by a factor of 2, at the same solid volume fraction of 20% and bulk Reynolds number are considered. These are complemented with two reference single-phase flows: the unladen case, and the flow of a Newtonian fluid with the effective suspension viscosity of the same mixture in the laminar regime. As recently highlighted in Costa et al. (PRL 117, 134501), a particle-wall layer is responsible for deviations of the statistics from what is observed in the continuum limit where the suspension is modeled as a Newtonian fluid with an effective viscosity. Here we investigate the fluid and particle dynamics in this layer and in the bulk. In the particle-wall layer, the near wall inhomogeneity has an influence on the suspension micro-structure over a distance proportional to the particle size. In this layer, particles have a significant (apparent) slip velocity that is reflected in the distribution of wall shear stresses. This is characterized by extreme events (both much higher and much lower than the mean). Based on these observations we provide a scaling for the particle-to-fluid apparent slip velocity as a function of the flow parameters. We also extend the flow scaling laws in to second-order Eulerian statistics in the homogeneous suspension region away from the wall. Finite-size effects in the bulk of the channel become important for larger particles, while negligible for lower-order statistics and smaller particles. Finally, we study the particle dynamics along the wall-normal direction. Our results suggest that 1-point dispersion is dominated by particle-turbulence (and not particle-particle) interactions, while differences in 2-point dispersion and collisional dynamics are consistent with a picture of shear-driven interactions.

Effects of Sediment Patches on Sediment Transport Predictions in Steep Mountain Channels

NASA Astrophysics Data System (ADS)

Monsalve Sepulveda, A.; Yager, E.

2013-12-01

Bed surface patches occur in most gravel-bedded rivers and in steep streams can be divided between relatively immobile boulders and more mobile patches of cobbles and gravel. This spatial variability in grain size, roughness and sorting impact bed load transport by altering the relative local mobility of different grain sizes and creating complex local flow fields. Large boulders also bear a significant part of the total shear stress and we hypothesize that the remaining shear stress on a given mobile patch is a distribution of values that depend on the local topography, patch type and location relative to the large roughness elements and thalweg. Current sediment transport equations do not account for the variation in roughness, local flow and grain size distributions on and between patches and often use an area-weighted approach to obtain a representative grain size distribution and reach-averaged shear stress. Such equations also do not distinguish between active (patches where at least one grain size is in motion) and inactive patches or include the difference in mobility between patch classes as result of spatial shear stress distributions. To understand the effects of sediment patches on sediment transport in steep channels, we calculated the shear stress distributions over a range of patch classes in a 10% gradient step-pool stream. We surveyed the bed with a high density resolution (every 5 cm in horizontal and vertical directions over a 40 m long reach) using a total station and terrestrial LiDAR, mapped and classified patches by their grain size distributions, and measured water surface elevations and mean velocities for low to moderate flow events. Using these data we calibrated a quasi-three dimensional model (FaSTMECH) to obtain shear stress distributions over each patch for a range of flow discharges. We modified Parker's (1990) equations to use the calculated shear stress distribution, measured grain sizes, and a specific hiding function for each patch class, and then added the bedload fluxes for each patch to calculate the reach-averaged sediment transport rate. Sediment mobility in patches was highly dependent on the patch's class and location relative to the thalweg and large roughness elements. Compared to deterministic formulations, the use of distributions of shear stress improved predictions of bedload transport in steep mountain channels.

The role of vegetation in the formation of anabranching channels in an ephemeral river, Northern plains, arid central Australia

NASA Astrophysics Data System (ADS)

Tooth, Stephen; Nanson, Gerald C.

2000-10-01

As the distribution and abundance of vegetation in drylands is often controlled by the greater availability of water along river channels, riparian vegetation has the potential to influence significantly dryland river form, process and behaviour. This paper demonstrates how a small indigenous shrub, the inland teatree (Melaleuca glomerata), influences the formation and maintenance of anabranching channels in a reach of the ephemeral Marshall River, Northern Plains, arid central Australia. Here, the Marshall is characterized by ridge-form anabranching, where water and sediment are routed through subparallel, multiple channels of variable size which occur within a typically straight channel-train. Channels are separated by channel-train ridges - narrow, flow-aligned, vegetated features - or by wider islands. By providing a substantial element of boundary roughness, dense stands of teatrees growing on channel beds or atop the ridges and islands influence flow velocities, flow depths and sediment transport, resulting in flow diversion, bank and floodplain erosion, and especially sediment deposition. Ridges and islands represent a continuum of forms, and their formation and development can be divided into a three-stage sequence involving teatree growth and alluvial sedimentation.1Teatrees colonize a flat, sandy channel bed, initiating the formation of ridges by lee-side accretion. Individual ridges grow laterally, vertically and longitudinally and maintain a geometrically similar streamlined (lemniscate) form that presents minimum drag.2Individual ridges grow in size, and interact with neighbouring ridges, causing the lemniscate forms to become distorted. Ridges in the lee of other ridges tend to be protected from the erosive effects of floods and survive, whereas individual teatrees or small ridges exposed to flow concentrated between larger ridges, tend to be removed.3

State diagram of a three-sphere microswimmer in a channel

NASA Astrophysics Data System (ADS)

Daddi-Moussa-Ider, Abdallah; Lisicki, Maciej; Mathijssen, Arnold J. T. M.; Hoell, Christian; Goh, Segun; Bławzdziewicz, Jerzy; Menzel, Andreas M.; Löwen, Hartmut

2018-06-01

Geometric confinements are frequently encountered in soft matter systems and in particular significantly alter the dynamics of swimming microorganisms in viscous media. Surface-related effects on the motility of microswimmers can lead to important consequences in a large number of biological systems, such as biofilm formation, bacterial adhesion and microbial activity. On the basis of low-Reynolds-number hydrodynamics, we explore the state diagram of a three-sphere microswimmer under channel confinement in a slit geometry and fully characterize the swimming behavior and trajectories for neutral swimmers, puller- and pusher-type swimmers. While pushers always end up trapped at the channel walls, neutral swimmers and pullers may further perform a gliding motion and maintain a stable navigation along the channel. We find that the resulting dynamical system exhibits a supercritical pitchfork bifurcation in which swimming in the mid-plane becomes unstable beyond a transition channel height while two new stable limit cycles or fixed points that are symmetrically disposed with respect to the channel mid-height emerge. Additionally, we show that an accurate description of the averaged swimming velocity and rotation rate in a channel can be captured analytically using the method of hydrodynamic images, provided that the swimmer size is much smaller than the channel height.

Long-range forces affecting equilibrium inertial focusing behavior in straight high aspect ratio microfluidic channels

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reece, Amy E.; Oakey, John, E-mail: joakey@uwyo.edu

2016-04-15

The controlled and directed focusing of particles within flowing fluids is a problem of fundamental and technological significance. Microfluidic inertial focusing provides passive and precise lateral and longitudinal alignment of small particles without the need for external actuation or sheath fluid. The benefits of inertial focusing have quickly enabled the development of miniaturized flow cytometers, size-selective sorting devices, and other high-throughput particle screening tools. Straight channel inertial focusing device design requires knowledge of fluid properties and particle-channel size ratio. Equilibrium behavior of inertially focused particles has been extensively characterized and the constitutive phenomena described by scaling relationships for straight channelsmore » of square and rectangular cross section. In concentrated particle suspensions, however, long-range hydrodynamic repulsions give rise to complex particle ordering that, while interesting and potentially useful, can also dramatically diminish the technique’s effectiveness for high-throughput particle handling applications. We have empirically investigated particle focusing behavior within channels of increasing aspect ratio and have identified three scaling regimes that produce varying degrees of geometrical ordering between focused particles. To explore the limits of inertial particle focusing and identify the origins of these long-range interparticle forces, we have explored equilibrium focusing behavior as a function of channel geometry and particle concentration. Experimental results for highly concentrated particle solutions identify equilibrium thresholds for focusing that scale weakly with concentration and strongly with channel geometry. Balancing geometry mediated inertial forces with estimates for interparticle repulsive forces now provide a complete picture of pattern formation among concentrated inertially focused particles and enhance our understanding of the fundamental limits of inertial focusing for technological applications.« less

Does the low hole transport mass in <110> and <111> Si nanowires lead to mobility enhancements at high field and stress: A self-consistent tight-binding study

NASA Astrophysics Data System (ADS)

Kotlyar, R.; Linton, T. D.; Rios, R.; Giles, M. D.; Cea, S. M.; Kuhn, K. J.; Povolotskyi, Michael; Kubis, Tillmann; Klimeck, Gerhard

2012-06-01

The hole surface roughness and phonon limited mobility in the silicon <100>, <110>, and <111> square nanowires under the technologically important conditions of applied gate bias and stress are studied with the self-consistent Poisson-sp3d5s*-SO tight-binding bandstructure method. Under an applied gate field, the hole carriers in a wire undergo a volume to surface inversion transition diminishing the positive effects of the high <110> and <111> valence band nonparabolicities, which are known to lead to the large gains of the phonon limited mobility at a zero field in narrow wires. Nonetheless, the hole mobility in the unstressed wires down to the 5 nm size remains competitive or shows an enhancement at high gate field over the large wire limit. Down to the studied 3 nm sizes, the hole mobility is degraded by strong surface roughness scattering in <100> and <110> wires. The <111> channels are shown to experience less surface scattering degradation. The physics of the surface roughness scattering dependence on wafer and channel orientations in a wire is discussed. The calculated uniaxial compressive channel stress gains of the hole mobility are found to reduce in the narrow wires and at the high field. This exacerbates the stressed mobility degradation with size. Nonetheless, stress gains of a factor of 2 are obtained for <110> wires down to 3 nm size at a 5×1012 cm-2 hole inversion density per gate area.

Design, development and evaluation of a resistor-based multiplexing circuit for a 20×20 SiPM array

NASA Astrophysics Data System (ADS)

Wang, Zhonghai; Sun, Xishan; Lou, Kai; Meier, Joseph; Zhou, Rong; Yang, Chaowen; Zhu, Xiaorong; Shao, Yiping

2016-04-01

One technical challenge in developing a large-size scintillator detector with multiple Silicon Photomultiplier (SiPM) arrays is to read out a large number of detector output channels. To achieve this, different signal multiplexing circuits have been studied and applied with different performances and cost-effective tradeoffs. Resistor-based multiplexing circuits exhibit simplicity and signal integrity, but also present the disadvantage of timing shift among different channels. In this study, a resistor-based multiplexing circuit for a large-sized SiPM array readout was developed and evaluated by simulation and experimental studies. Similarly to a multiplexing circuit used for multi-anode PMT, grounding and branching resistors were connected to each SiPM output channel. The grounding resistor was used to simultaneously reduce the signal crosstalk among different channels and to improve timing performance. Both grounding and branching resistor values were optimized to maintain a balanced performance of the event energy, timing, and positioning. A multiplexing circuit was implemented on a compact PCB and applied for a flat-panel detector which consisted of a 32×32 LYSO scintillator crystals optically coupled to 5×5 SiPM arrays for a total 20×20 output channels. Test results showed excellent crystal identification for all 1024 LYSO crystals (each with 2×2×30 mm3 size) with 22Na flood-source irradiation. The measured peak-to-valley ratio from typical crystal map profile is around 3:1 to 6.6:1, an average single crystal energy resolution of about 17.3%, and an average single crystal timing resolution of about 2 ns. Timing shift among different crystals, as reported in some other resistor-based multiplexing circuit designs, was not observed. In summary, we have designed and implemented a practical resistor-based multiplexing circuit that can be readily applied for reading out a large SiPM array with good detector performance.

Evaluating Effects of Floodplain Constriction Along a High Energy Gravel-Bed River: Snake River, WY

NASA Astrophysics Data System (ADS)

Leonard, Christina M.

This study examined approximately 66 km of the Snake River, WY, USA, spanning a natural reach within Grand Teton National Park and a reach immediately downstream that is confined by artificial levees. We linked the channel adjustments observed within these two reaches between 2007 and 2012 to sediment transport processes by developing a morphological sediment budget. A pair of digital elevation models (DEMs) was generated by fusing LiDAR topography with depth estimates derived from optical image data within wetted channels. Errors for both components of the DEMs (LiDAR and optical bathymetry) were propagated through the DEM of difference and sediment budget calculations. Our results indicated that even with the best available methods for acquiring high resolution topographic data over large areas, the uncertainty associated with bed elevation estimates implied that net volumetric changes were not statistically significant. In addition to the terrain analysis, we performed a tracer study to assess the mobility of different grain size classes in different morphological units. Grain sizes, hydraulic conditions, and flow resistance characteristics along cross-sections were used to calculate critical discharges for entrainment, but this bulk characterization of fluid driving forces failed to predict bed mobility. Our results indicated that over seasonal timescales specific grain classes were not preferentially entrained. Surface and subsurface grain size data were used to calculate armoring and dimensionless sediment transport ratios for both reaches; sediment supply exceeded transport capacity in the natural reach and vice versa in the confined reach. We used a conceptual model to describe channel adjustments to lateral constriction by levees. Initially we suggest levees focused flow energy and incised the bed, resulting in bed armoring. Bed armoring promoted channel widening, but levees prevented this and instead the channel migrated more rapidly within the constricted braidplain, eroding vegetated islands and bars and excavating sediment from the reach.

Centrifugal sedimentation for selectively packing channels with silica microbeads in three-dimensional micro/nanofluidic devices.

PubMed

Gong, Maojun; Bohn, Paul W; Sweedler, Jonathan V

2009-03-01

Incorporation of nanofluidic elements into microfluidic channels is one approach for adding filtration and partition functionality to planar microfluidic devices, as well as providing enhanced biomolecular separations. Here we introduce a strategy to pack microfluidic channels with silica nanoparticles and microbeads, thereby indirectly producing functional nanostructures; the method allows selected channels to be packed, here demonstrated so that a separation channel is packed while keeping an injection channel unpacked. A nanocapillary array membrane is integrated between two patterned microfluidic channels that cross each other in vertically separated layers. The membrane serves both as a frit for bead packing and as a fluid communication conduit between microfluidic channels. Centrifugal force-assisted sedimentation is then used to selectively pack the microfluidic channels using an aqueous silica bead suspension loaded into the appropriate inlet reservoirs. This packing approach may be used to simultaneously pack multiple channels with silica microbeads having different sizes and surface properties. The chip design and packing method introduced here are suitable for packing silica particles in sizes ranging from nanometers to micrometers and allow rapid (approximately 10 min) packing with high quality. The liquid/analyte transport characteristics of these packed micro/nanofluidic devices have potential utility in a wide range of applications, including electroosmotic pumping, liquid chromatographic separations, and electrochromatography.

Use of geomorphic regime diagrams in channel restoration

NASA Astrophysics Data System (ADS)

Buffington, J. M.; Parker, G.

2005-12-01

Regime diagrams can be used to predict channel characteristics (depth, grain size, slope) and reach-scale channel morphology (pool-riffle, plane-bed, etc.) as a function imposed values of discharge and bedload sediment supply. In terms of stream restoration, these diagrams can be used to set target values for creating or maintaining desired channel types and associated aquatic habitats or to assess the stable channel morphology for imposed watershed conditions. However, alluvial channels are dynamic and may move toward new states with interannual changes in discharge or sediment supply. These changes may be small-scale adjustments of channel dimensions, grain size, or slope, or they may be whole-sale metamorphosis to a new reach type. The degree of change likely depends on local physiography and the associated characteristic variations of discharge and sediment supply. We propose a framework for assessing the relative degree of channel stability in different physiographic settings using a regime diagram that is explicitly linked to rational equations for discharge and sediment supply. This approach allows a more dynamic representation of potential channel conditions that can be expected for a given restoration design (or for an existing channel), and links site conditions to discharge and sediment supply variability imposed by larger-scale basin conditions and physiography.

Characterization of the startup transient electrokinetic flow in rectangular channels of arbitrary dimensions, zeta potential distribution, and time-varying pressure gradient.

PubMed

Miller, Andrew; Villegas, Arturo; Diez, F Javier

2015-03-01

The solution to the startup transient EOF in an arbitrary rectangular microchannel is derived analytically and validated experimentally. This full 2D transient solution describes the evolution of the flow through five distinct periods until reaching a final steady state. The derived analytical velocity solution is validated experimentally for different channel sizes and aspect ratios under time-varying pressure gradients. The experiments used a time resolved micro particle image velocimetry technique to calculate the startup transient velocity profiles. The measurements captured the effect of time-varying pressure gradient fields derived in the analytical solutions. This is tested by using small reservoirs at both ends of the channel which allowed a time-varying pressure gradient to develop with a time scale on the order of the transient EOF. Results showed that under these common conditions, the effect of the pressure build up in the reservoirs on the temporal development of the transient startup EOF in the channels cannot be neglected. The measurements also captured the analytical predictions for channel walls made of different materials (i.e., zeta potentials). This was tested in channels that had three PDMS and one quartz wall, resulting in a flow with an asymmetric velocity profile due to variations in the zeta potential between the walls. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Increased expression of CaV3.2 T-type calcium channels in damaged DRG neurons contributes to neuropathic pain in rats with spared nerve injury.

PubMed

Kang, Xue-Jing; Chi, Ye-Nan; Chen, Wen; Liu, Feng-Yu; Cui, Shuang; Liao, Fei-Fei; Cai, Jie; Wan, You

2018-01-01

Ion channels are very important in the peripheral sensitization in neuropathic pain. Our present study aims to investigate the possible contribution of Ca V 3.2 T-type calcium channels in damaged dorsal root ganglion neurons in neuropathic pain. We established a neuropathic pain model of rats with spared nerve injury. In these model rats, it was easy to distinguish damaged dorsal root ganglion neurons (of tibial nerve and common peroneal nerve) from intact dorsal root ganglion neurons (of sural nerves). Our results showed that Ca V 3.2 protein expression increased in medium-sized neurons from the damaged dorsal root ganglions but not in the intact ones. With whole cell patch clamp recording technique, it was found that after-depolarizing amplitudes of the damaged medium-sized dorsal root ganglion neurons increased significantly at membrane potentials of -85 mV and -95 mV. These results indicate a functional up-regulation of Ca V 3.2 T-type calcium channels in the damaged medium-sized neurons after spared nerve injury. Behaviorally, blockade of Ca V 3.2 with antisense oligodeoxynucleotides could significantly reverse mechanical allodynia. These results suggest that Ca V 3.2 T-type calcium channels in damaged medium-sized dorsal root ganglion neurons might contribute to neuropathic pain after peripheral nerve injury.

Coupled LBM-DEM Three-phase Simulation on Seepage of CO2 Stored under the Seabed.

NASA Astrophysics Data System (ADS)

Kano, Y.; Sato, T.

2017-12-01

Concerning the seepage of CO2 stored in a subsea formation, CO2 bubble/droplet rises to the sea-surface dissolving into the seawater, and the acidification of local seawater will be a problem. Previous research indicated that seepage rate and bubble size significantly affect its behaviour (Kano et al., 2009; Dewar et al., 2013). On the other hand, Kawada's experiments (2014) indicated that grain size affects formation of gas channels and bubbles through granular media. CO2 seepage through marine sediments probably shows similar behaviour. Additionally, such mobilisation and displacement of sand grains by gas migration may also cause capillary fracturing of CO2 in the reservoir and seal. To predict these phenomena, it is necessary to reveal three-phase behaviour of gas-water-sediment grains. We built gas-liquid-solid three-phase flow 3D simulator by coupling LBM-DEM program, and simulation results showed that the mobilisation of sand grain forms gas channels and affects bubble formation compared with that through solid porous media (Kano and Sato, 2017). In this presentation, we will report simulation results on effects of porosity, grain size and gas flow rate on the formation of gas channels and bubble and their comparison with laboratory experimental data. The results indicate that porosity and grain size of sand gravels affect the width of formed gas channels and resulting formed bubble size on the order of supposed seepage rate in the CO2 storage and that in most of experiment's conditions. References: Abe, S., Place, D., Mora, P., 2004. Pure. Appl. Geophys., 161, 2265-2277. (accessed Aug 01, 2017). Dewar, M., Wei, W., McNeil, D., Chen, B., 2013. Marine Pollution Bulletin 73(2), 504-515. Kano, Y., Sato, T., Kita, J., Hirabayashi, S., Tabeta, S., 2009. Int. J. Greenhouse Gas Control, Vol. 3(5), 617-625. Kano, Y. and Sato, T., 2017. In Proceeding of GHGT-13, Lausanne, Switzerland, Nov. 14-18, 2016. Kawada, R. 2014. Graduation thesis. Faculty of Engineering, The University of Tokyo. (in Japanese).

Persistence of Salmonid Redds

NASA Astrophysics Data System (ADS)

Buffington, J. M.; Buxton, T.; Fremier, A. K.; Hassan, M. A.; Yager, E.

2013-12-01

The construction of redds by spawning salmonids modifies fluvial processes in ways that are beneficial to egg and embryo survival. Redd topography induces hyporheic flow that oxygenates embryos incubating within the streambed and creates form drag that reduces bed mobility and scour of salmonid eggs. Winnowing of fine material during redd construction also coarsens the streambed, increasing bed porosity and hyporheic flow and reducing bed mobility. In addition to the biological benefits, redds may influence channel morphology by altering channel hydraulics and bed load transport rates depending on the size and extent of redds relative to the size of the channel. A key question is how long do the physical and biological effects of redds last? Field observations indicate that in some basins redds are ephemeral, with redd topography rapidly erased by subsequent floods, while in other basins, redds can persist for years. We hypothesize that redd persistence is a function of basin hydrology, sediment supply, and characteristics of the spawning fish. Hydrology controls the frequency and magnitude of bed mobilizing flows following spawning, while bed load supply (volume and caliber) controls the degree of textural fining and consequent bed mobility after spawning, as well as the potential for burial of redd features. The effectiveness of flows in terms of their magnitude and duration depend on hydroclimate (i.e., snowmelt, rainfall, or transitional hydrographs), while bed load supply depends on basin geology, land use, and natural disturbance regimes (e.g., wildfire). Location within the stream network may also influence redd persistence. In particular, lakes effectively trap sediment and regulate downstream flow, which may promote long-lived redds in stream reaches below lakes. These geomorphic controls are modulated by biological factors: fish species (size of fish controls size of redds and magnitude of streambed coarsening); life history (timing of spawning and incubation relative to high flows); and population size (density of redds and extent of streambed alteration within a given reach). Species and life history also control the location of spawning within the basin, dictating the flow and sediment supply regimes. A theoretical framework is developed for predicting redd persistence as a function of the above physical and biological factors. We expect that long-lived redds will indicate either that the river is not competent to re-work the effects of spawning or that spawning occurs after peak flow events that are capable of modifying redd features. The longevity of redds and their associated effects on fluvial processes also provides a measure of the degree of potential ecological conditioning for future generations of fish. Future work will test the framework in field and laboratory settings.

Sediment supply controls equilibrium channel geometry in gravel rivers

PubMed Central

Finnegan, Noah J.; Willenbring, Jane K.

2017-01-01

In many gravel-bedded rivers, floods that fill the channel banks create just enough shear stress to move the median-sized gravel particles on the bed surface (D50). Because this observation is common and is supported by theory, the coincidence of bankfull flow and the incipient motion of D50 has become a commonly used assumption. However, not all natural gravel channels actually conform to this simple relationship; some channels maintain bankfull stresses far in excess of the critical stress required to initiate sediment transport. We use a database of >300 gravel-bedded rivers and >600 10Be-derived erosion rates from across North America to explore the hypothesis that sediment supply drives the magnitude of bankfull shear stress relative to the critical stress required to mobilize the median bed surface grain size (τbf*/τc*). We find that τbf*/τc* is significantly higher in West Coast river reaches (2.35, n = 96) than in river reaches elsewhere on the continent (1.03, n = 245). This pattern parallels patterns in erosion rates (and hence sediment supplies). Supporting our hypothesis, we find a significant correlation between upstream erosion rate and local τbf*/τc* at sites where this comparison is possible. Our analysis reveals a decrease in bed surface armoring with increasing τbf*/τc*, suggesting channels accommodate changes in sediment supply through adjustments in bed surface grain size, as also shown through numerical modeling. Our findings demonstrate that sediment supply is encoded in the bankfull hydraulic geometry of gravel bedded channels through its control on bed surface grain size. PMID:28289212

Enhanced oxidation resistance of active nanostructures via dynamic size effect

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Yun; Yang, Fan; Zhang, Yi

A major challenge limiting the practical applications of nanomaterials is that the activities of nanostructures (NSs) increase with reduced size, often sacrificing their stability in the chemical environment. Under oxidative conditions, NSs with smaller sizes and higher defect densities are commonly expected to oxidize more easily, since high-concentration defects can facilitate oxidation by enhancing the reactivity with O 2 and providing a fast channel for oxygen incorporation. Here, using FeO NSs as an example, we show to the contrary, that reducing the size of active NSs can drastically increase their oxidation resistance. A maximum oxidation resistance is found for FeOmore » NSs with dimensions below 3.2 nm. Rather than being determined by the structure or electronic properties of active sites, the enhanced oxidation resistance originates from the size-dependent structural dynamics of FeO NSs in O 2. We find this dynamic size effect to govern the chemical properties of active NSs.« less

Enhanced oxidation resistance of active nanostructures via dynamic size effect

DOE PAGES

Liu, Yun; Yang, Fan; Zhang, Yi; ...

2017-02-22

A major challenge limiting the practical applications of nanomaterials is that the activities of nanostructures (NSs) increase with reduced size, often sacrificing their stability in the chemical environment. Under oxidative conditions, NSs with smaller sizes and higher defect densities are commonly expected to oxidize more easily, since high-concentration defects can facilitate oxidation by enhancing the reactivity with O 2 and providing a fast channel for oxygen incorporation. Here, using FeO NSs as an example, we show to the contrary, that reducing the size of active NSs can drastically increase their oxidation resistance. A maximum oxidation resistance is found for FeOmore » NSs with dimensions below 3.2 nm. Rather than being determined by the structure or electronic properties of active sites, the enhanced oxidation resistance originates from the size-dependent structural dynamics of FeO NSs in O 2. We find this dynamic size effect to govern the chemical properties of active NSs.« less

Effect of quantum noise on deterministic remote state preparation of an arbitrary two-particle state via various quantum entangled channels

NASA Astrophysics Data System (ADS)

Qu, Zhiguo; Wu, Shengyao; Wang, Mingming; Sun, Le; Wang, Xiaojun

2017-12-01

As one of important research branches of quantum communication, deterministic remote state preparation (DRSP) plays a significant role in quantum network. Quantum noises are prevalent in quantum communication, and it can seriously affect the safety and reliability of quantum communication system. In this paper, we study the effect of quantum noise on deterministic remote state preparation of an arbitrary two-particle state via different quantum channels including the χ state, Brown state and GHZ state. Firstly, the output states and fidelities of three DRSP algorithms via different quantum entangled channels in four noisy environments, including amplitude-damping, phase-damping, bit-flip and depolarizing noise, are presented, respectively. And then, the effects of noises on three kinds of preparation algorithms in the same noisy environment are discussed. In final, the theoretical analysis proves that the effect of noise in the process of quantum state preparation is only related to the noise type and the size of noise factor and independent of the different entangled quantum channels. Furthermore, another important conclusion is given that the effect of noise is also independent of how to distribute intermediate particles for implementing DRSP through quantum measurement during the concrete preparation process. These conclusions will be very helpful for improving the efficiency and safety of quantum communication in a noisy environment.

Size-dependent abnormal thermo-enhanced luminescence of ytterbium-doped nanoparticles.

PubMed

Cui, Xiangshui; Cheng, Yao; Lin, Hang; Huang, Feng; Wu, Qingping; Wang, Yuansheng

2017-09-21

Thermal quenching above 300 K is widely expected in photoluminescence. Luminescence quenching is usually ascribed to the non-radiative relaxation of excited electrons to the ground state of the activators, during which a high temperature always plays a role in pushing the excited electrons towards the quenching channels, leading to thermal quenching. For the lanthanide-doped nanoparticles, however, there is a special luminescence quenching channel that does not exist in their bulk counterparts, i.e., energy migration-induced surface quenching. Herein, a size-dependent abnormal thermal enhancement of luminescence in the temperature range of 300 K to 423 K in the ytterbium-doped fluoride nanoparticles is presented for the first time. Importantly, in this work, we originally demonstrate that the energy migration-induced surface quenching can be suppressed by increasing temperature, which results in the abnormal thermal enhancement of luminescence. According to the temperature-dependent X-ray diffraction and lifetime analyses, an underlying mechanism based on the effect of thermal lattice expansion on ytterbium-mediated energy migration is proposed. This new finding adds new insights to the size effect on the luminescent characteristics of nanoparticles, which could be utilized to construct some unique nanostructures, especially for many important temperature-related purposes, such as thermal sensing technology.

Activation of Mechanosensitive Transient Receptor Potential/Piezo Channels in Odontoblasts Generates Action Potentials in Cocultured Isolectin B4-negative Medium-sized Trigeminal Ganglion Neurons.

PubMed

Sato, Masaki; Ogura, Kazuhiro; Kimura, Maki; Nishi, Koichi; Ando, Masayuki; Tazaki, Masakazu; Shibukawa, Yoshiyuki

2018-06-01

Various stimuli to the dentin surface elicit dentinal pain by inducing dentinal fluid movement causing cellular deformation in odontoblasts. Although odontoblasts detect deformation by the activation of mechanosensitive ionic channels, it is still unclear whether odontoblasts are capable of establishing neurotransmission with myelinated A delta (Aδ) neurons. Additionally, it is still unclear whether these neurons evoke action potentials by neurotransmitters from odontoblasts to mediate sensory transduction in dentin. Thus, we investigated evoked inward currents and evoked action potentials form trigeminal ganglion (TG) neurons after odontoblast mechanical stimulation. We used patch clamp recordings to identify electrophysiological properties and record evoked responses in TG neurons. We classified TG cells into small-sized and medium-sized neurons. In both types of neurons, we observed voltage-dependent inward currents. The currents from medium-sized neurons showed fast inactivation kinetics. When mechanical stimuli were applied to odontoblasts, evoked inward currents were recorded from medium-sized neurons. Antagonists for the ionotropic adenosine triphosphate receptor (P2X 3 ), transient receptor potential channel subfamilies, and Piezo1 channel significantly inhibited these inward currents. Mechanical stimulation to odontoblasts also generated action potentials in the isolectin B 4 -negative medium-sized neurons. Action potentials in these isolectin B 4 -negative medium-sized neurons showed a short duration. Overall, electrophysiological properties of neurons indicate that the TG neurons with recorded evoked responses after odontoblast mechanical stimulation were myelinated Aδ neurons. Odontoblasts established neurotransmission with myelinated Aδ neurons via P2X 3 receptor activation. The results also indicated that mechanosensitive TRP/Piezo1 channels were functionally expressed in odontoblasts. The activation of P2X 3 receptors induced an action potential in the Aδ neurons, underlying a sensory generation mechanism of dentinal pain. Copyright © 2018 American Association of Endodontists. Published by Elsevier Inc. All rights reserved.

Designing a Small-Sized Engineering Model of Solar EUV Telescopr for a Korean Satellite

NASA Astrophysics Data System (ADS)

Han, Jung-Hoon; Jang, Min-Hwan; Kim, Sang-Joon

2001-11-01

For the research of solar EUV (extreme ultraviolet) radiation, we have designed a small-sized engineering model of solar EUV telescope, which is suitable for a Korean satellite. The EUV solar telescope was designed to observe the sun at 584.3Å (He¥°) and 629.7Å (O¥´). The optical system is an f/8 Ritchey-Chrètien, and the effective diameter and focal length are 80§® and 640§®, respectively. The He¥°and O¥´ filters are loaded in a filter wheel. In the detection part, the MCP (MicroChannel Plate) type is Z-stack, and the channel-to-diameter ratio is 40:1. MCP and CCD are connected by fiber optic taper. A commercial optical design software is used for the analysis of the optical system design.

Particle migration and sorting in microbubble streaming flows

PubMed Central

Thameem, Raqeeb; Hilgenfeldt, Sascha

2016-01-01

Ultrasonic driving of semicylindrical microbubbles generates strong streaming flows that are robust over a wide range of driving frequencies. We show that in microchannels, these streaming flow patterns can be combined with Poiseuille flows to achieve two distinctive, highly tunable methods for size-sensitive sorting and trapping of particles much smaller than the bubble itself. This method allows higher throughput than typical passive sorting techniques, since it does not require the inclusion of device features on the order of the particle size. We propose a simple mechanism, based on channel and flow geometry, which reliably describes and predicts the sorting behavior observed in experiment. It is also shown that an asymptotic theory that incorporates the device geometry and superimposed channel flow accurately models key flow features such as peak speeds and particle trajectories, provided it is appropriately modified to account for 3D effects caused by the axial confinement of the bubble. PMID:26958103

Chloride currents in cones modify feedback from horizontal cells to cones in goldfish retina

PubMed Central

Endeman, Duco; Fahrenfort, Iris; Sjoerdsma, Trijntje; Steijaert, Marvin; ten Eikelder, Huub; Kamermans, Maarten

2012-01-01

In neuronal systems, excitation and inhibition must be well balanced to ensure reliable information transfer. The cone/horizontal cell (HC) interaction in the retina is an example of this. Because natural scenes encompass an enormous intensity range both in temporal and spatial domains, the balance between excitation and inhibition in the outer retina needs to be adaptable. How this is achieved is unknown. Using electrophysiological techniques in the isolated retina of the goldfish, it was found that opening Ca2+-dependent Cl− channels in recorded cones reduced the size of feedback responses measured in both cones and HCs. Furthermore, we show that cones express Cl− channels that are gated by GABA released from HCs. Similar to activation of ICl(Ca), opening of these GABA-gated Cl− channels reduced the size of light-induced feedback responses both in cones and HCs. Conversely, application of picrotoxin, a blocker of GABAA and GABAC receptors, had the opposite effect. In addition, reducing GABA release from HCs by blocking GABA transporters also led to an increase in the size of feedback. Because the independent manipulation of Ca2+-dependent Cl− currents in individual cones yielded results comparable to bath-applied GABA, it was concluded that activation of either Cl− current by itself is sufficient to reduce the size of HC feedback. However, additional effects of GABA on outer retinal processing cannot be excluded. These results can be accounted for by an ephaptic feedback model in which a cone Cl− current shunts the current flow in the synaptic cleft. The Ca2+-dependent Cl− current might be essential to set the initial balance between the feedforward and the feedback signals active in the cone HC synapse. It prevents that strong feedback from HCs to cones flood the cone with Ca2+. Modulation of the feedback strength by GABA might play a role during light/dark adaptation, adjusting the amount of negative feedback to the signal to noise ratio of the cone output. PMID:22890705

Extracting Cell Stiffness from Real-Time Deformability Cytometry: Theory and Experiment.

PubMed

Mietke, Alexander; Otto, Oliver; Girardo, Salvatore; Rosendahl, Philipp; Taubenberger, Anna; Golfier, Stefan; Ulbricht, Elke; Aland, Sebastian; Guck, Jochen; Fischer-Friedrich, Elisabeth

2015-11-17

Cell stiffness is a sensitive indicator of physiological and pathological changes in cells, with many potential applications in biology and medicine. A new method, real-time deformability cytometry, probes cell stiffness at high throughput by exposing cells to a shear flow in a microfluidic channel, allowing for mechanical phenotyping based on single-cell deformability. However, observed deformations of cells in the channel not only are determined by cell stiffness, but also depend on cell size relative to channel size. Here, we disentangle mutual contributions of cell size and cell stiffness to cell deformation by a theoretical analysis in terms of hydrodynamics and linear elasticity theory. Performing real-time deformability cytometry experiments on both model spheres of known elasticity and biological cells, we demonstrate that our analytical model not only predicts deformed shapes inside the channel but also allows for quantification of cell mechanical parameters. Thereby, fast and quantitative mechanical sampling of large cell populations becomes feasible. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

Extracting Cell Stiffness from Real-Time Deformability Cytometry: Theory and Experiment

PubMed Central

Mietke, Alexander; Otto, Oliver; Girardo, Salvatore; Rosendahl, Philipp; Taubenberger, Anna; Golfier, Stefan; Ulbricht, Elke; Aland, Sebastian; Guck, Jochen; Fischer-Friedrich, Elisabeth

2015-01-01

Cell stiffness is a sensitive indicator of physiological and pathological changes in cells, with many potential applications in biology and medicine. A new method, real-time deformability cytometry, probes cell stiffness at high throughput by exposing cells to a shear flow in a microfluidic channel, allowing for mechanical phenotyping based on single-cell deformability. However, observed deformations of cells in the channel not only are determined by cell stiffness, but also depend on cell size relative to channel size. Here, we disentangle mutual contributions of cell size and cell stiffness to cell deformation by a theoretical analysis in terms of hydrodynamics and linear elasticity theory. Performing real-time deformability cytometry experiments on both model spheres of known elasticity and biological cells, we demonstrate that our analytical model not only predicts deformed shapes inside the channel but also allows for quantification of cell mechanical parameters. Thereby, fast and quantitative mechanical sampling of large cell populations becomes feasible. PMID:26588562

Characterizing Social Networks and Communication Channels in a Web-Based Peer Support Intervention.

PubMed

Owen, Jason E; Curran, Michaela; Bantum, Erin O'Carroll; Hanneman, Robert

2016-06-01

Web and mobile (mHealth) interventions have promise for improving health outcomes, but engagement and attrition may be reducing effect sizes. Because social networks can improve engagement, which is a key mechanism of action, understanding the structure and potential impact of social networks could be key to improving mHealth effects. This study (a) evaluates social network characteristics of four distinct communication channels (discussion board, chat, e-mail, and blog) in a large social networking intervention, (b) predicts membership in online communities, and (c) evaluates whether community membership impacts engagement. Participants were 299 cancer survivors with significant distress using the 12-week health-space.net intervention. Social networking attributes (e.g., density and clustering) were identified separately for each type of network communication (i.e., discussion board, blog, web mail, and chat). Each channel demonstrated high levels of clustering, and being a community member in one communication channel was associated with being in the same community in each of the other channels (φ = 0.56-0.89, ps < 0.05). Predictors of community membership differed across communication channels, suggesting that each channel reached distinct types of users. Finally, membership in a discussion board, chat, or blog community was strongly associated with time spent engaging with coping skills exercises (Ds = 1.08-1.84, ps < 0.001) and total time of intervention (Ds = 1.13-1.80, ps < 0.001). mHealth interventions that offer multiple channels for communication allow participants to expand the number of individuals with whom they are communicating, create opportunities for communicating with different individuals in distinct channels, and likely enhance overall engagement.

Characterizing Social Networks and Communication Channels in a Web-Based Peer Support Intervention

PubMed Central

Curran, Michaela; Bantum, Erin O'Carroll; Hanneman, Robert

2016-01-01

Abstract Web and mobile (mHealth) interventions have promise for improving health outcomes, but engagement and attrition may be reducing effect sizes. Because social networks can improve engagement, which is a key mechanism of action, understanding the structure and potential impact of social networks could be key to improving mHealth effects. This study (a) evaluates social network characteristics of four distinct communication channels (discussion board, chat, e-mail, and blog) in a large social networking intervention, (b) predicts membership in online communities, and (c) evaluates whether community membership impacts engagement. Participants were 299 cancer survivors with significant distress using the 12-week health-space.net intervention. Social networking attributes (e.g., density and clustering) were identified separately for each type of network communication (i.e., discussion board, blog, web mail, and chat). Each channel demonstrated high levels of clustering, and being a community member in one communication channel was associated with being in the same community in each of the other channels (φ = 0.56–0.89, ps < 0.05). Predictors of community membership differed across communication channels, suggesting that each channel reached distinct types of users. Finally, membership in a discussion board, chat, or blog community was strongly associated with time spent engaging with coping skills exercises (Ds = 1.08–1.84, ps < 0.001) and total time of intervention (Ds = 1.13–1.80, ps < 0.001). mHealth interventions that offer multiple channels for communication allow participants to expand the number of individuals with whom they are communicating, create opportunities for communicating with different individuals in distinct channels, and likely enhance overall engagement. PMID:27327066

Analysis of electrical characteristics and proposal of design guide for ultra-scaled nanoplate vertical FET and 6T-SRAM

NASA Astrophysics Data System (ADS)

Seo, Youngsoo; Kim, Shinkeun; Ko, Kyul; Woo, Changbeom; Kim, Minsoo; Lee, Jangkyu; Kang, Myounggon; Shin, Hyungcheol

2018-02-01

In this paper, electrical characteristics of gate-all-around (GAA) nanoplate (NP) vertical FET (VFET) were analyzed for single transistor and 6T-SRAM cell through 3D technology computer-aided design (TCAD) simulation. In VFET, gate and extension lengths are not limited by the area of device because theses lengths are vertically located. The height of NP is assumed in 40 nm considering device fabrication method (top-down approach). According to the sizes of devices, we analyzed the performances of device such as total resistance, capacitance, intrinsic gate delay, sub-threshold swing (S.S), drain-induced barrier lowering (DIBL) and static noise margin (SNM). As the gate length becomes larger, the resistance should be smaller because the total height of NP is fixed in 40 nm. Also, when the channel thickness becomes thicker, the total resistance becomes smaller since the sheet resistances of channel and extension become smaller and the contact resistance becomes smaller due to the increasing contact area. In addition, as the length of channel pitch increases, the parasitic capacitance comes to be larger due to the increasing area of gate-drain and gate-source. The performance of RC delay is best in the shortest gate length (12 nm), the thickest channel (6 nm) and the shortest channel pitch (17 nm) owing to the reduced resistance and parasitic capacitance. However, the other performances such as DIBL, S.S, on/off ratio and SNM are worst because the short channel effect is highest in this situation. Also, we investigated the performance of the multi-channel device. As the number of channels increases, the performance of device and the reliability of SRAM improve because of reduced contact resistance, increased gate dimension and multi-channel compensation effect.

Effects of biofilm on river-bed scour.

PubMed

Piqué, Gemma; Vericat, Damià; Sabater, Sergi; Batalla, Ramon J

2016-12-01

Biofilm acts stabilising river-bed sediments, interfering with particle entrainment and, consequently, preventing bed disturbance. In this paper we present the results of a series of experiments carried out in indoor channels, aimed to understand biofilm alteration of bed material motion and topographic changes in stream channels. We analysed the erosion patterns and bedload rates in non-cohesive sediments in channels colonised by biofilms and compared them to biofilm-free others. All the channels had the same conditions of light irradiance, temperature, slope, and particle size (sand). Discharge and water surface slope were modified to create a range of hydraulic conditions, with pairs of colonised and non-colonised channels subjected to the same flows. We observed that biofilm slightly modified bed roughness and flow hydraulics, but that highly influenced bed disturbance. Biofilm caused bed scour to occur in patches unevenly distributed along the channel length, as a result of localised weaknesses of the biofilm. Once biofilm was ripped up it was transported in chunks, and sand grains were observed attached to these chunks. In non-colonised sediments the erosion was more homogeneous and the formation and movement of bedforms were observed. On average, bedload rates were 5 times lower when biofilm was present. Overall, the protective effect of the biofilm prevented generalised erosion of the channel and delayed the entrainment and transport of sand grains. Results emphasised the important role of biofilm in the incipient motion of bed-material in stream channels; this role may affect the magnitude and frequency of subsequent river bed processes, notably the onset of bedload and associated channel morpho-dynamics. Copyright © 2016 Elsevier B.V. All rights reserved.

Quasistatic packings of droplets in flat microfluidic channels

NASA Astrophysics Data System (ADS)

Kadivar, Erfan

2016-02-01

As observed in recent experiments, monodisperse droplets self-assemble spontaneously in different ordered packings. In this work, we present a numerical study of the droplet packings in the flat rectangular microfluidic channels. Employing the boundary element method, we numerically solve the Stokes equation in two-dimension and investigate the appearance of droplet packing and transition between one and two-row packings of monodisperse emulsion droplets. By calculating packing force applied on the droplet interface, we investigate the effect of flow rate, droplet size, and surface tension on the packing configurations of droplets and transition between different topological packings.

A molecular dynamics study of freezing in a confined geometry

NASA Technical Reports Server (NTRS)

Ma, Wen-Jong; Banavar, Jayanth R.; Koplik, Joel

1992-01-01

The dynamics of freezing of a Lennard-Jones liquid in narrow channels bounded by molecular walls is studied by computer simulation. The time development of ordering is quantified and a novel freezing mechanism is observed. The liquid forms layers and subsequent in-plane ordering within a layer is accompanied by a sharpening of the layer in the transverse direction. The effects of channel size, the methods of quench, the liquid-wall interaction and the roughness of walls on the freezing mechanism are elucidated. Comparison with recent experiments on freezing in confined geometries is presented.

Development and characterization of 12 microsatellite markers for the Island Night Lizard (Xantusia riversiana), a threatened species endemic to the Channel Islands, California, USA

USGS Publications Warehouse

O'Donnell, Ryan P.; Drost, Charles A.; Mock, Karen E.

2014-01-01

The Island Night Lizard is a federally threatened species endemic to the Channel Islands of California. Twelve microsatellite loci were developed for use in this species and screened in 197 individuals from across San Nicolas Island, California. The number of alleles per locus ranged from 6 to 21. Observed heterozygosities ranged from 0.520 to 0.843. These microsatellite loci will be used to investigate population structure, effective population size, and gene flow across the island, to inform protection and management of this species.

A three-dimensional stratigraphic model for aggrading submarine channels based on laboratory experiments, numerical modeling, and sediment cores

NASA Astrophysics Data System (ADS)

Limaye, A. B.; Komatsu, Y.; Suzuki, K.; Paola, C.

2017-12-01

Turbidity currents deliver clastic sediment from continental margins to the deep ocean, and are the main driver of landscape and stratigraphic evolution in many low-relief, submarine environments. The sedimentary architecture of turbidites—including the spatial organization of coarse and fine sediments—is closely related to the aggradation, scour, and lateral shifting of channels. Seismic stratigraphy indicates that submarine, meandering channels often aggrade rapidly relative to lateral shifting, and develop channel sand bodies with high vertical connectivity. In comparison, the stratigraphic architecture developed by submarine, braided is relatively uncertain. We present a new stratigraphic model for submarine braided channels that integrates predictions from laboratory experiments and flow modeling with constraints from sediment cores. In the laboratory experiments, a saline density current developed subaqueous channels in plastic sediment. The channels aggraded to form a deposit with a vertical scale of approximately five channel depths. We collected topography data during aggradation to (1) establish relative stratigraphic age, and (2) estimate the sorting patterns of a hypothetical grain size distribution. We applied a numerical flow model to each topographic surface and used modeled flow depth as a proxy for relative grain size. We then conditioned the resulting stratigraphic model to observed grain size distributions using sediment core data from the Nankai Trough, offshore Japan. Using this stratigraphic model, we establish new, quantitative predictions for the two- and three-dimensional connectivity of coarse sediment as a function of fine-sediment fraction. Using this case study as an example, we will highlight outstanding challenges in relating the evolution of low-relief landscapes to the stratigraphic record.

Bridging the gaps: An overview of wood across time and space in diverse rivers

NASA Astrophysics Data System (ADS)

Wohl, Ellen

2017-02-01

Nearly 50 years of research focused on large wood (LW) in rivers provide a basis for understanding how wood enters rivers; how wood decays, breaks, and is transported downstream; and how at least temporarily stable wood influences channel geometry, fluxes of water, sediment, and organic matter, and the abundance and diversity of aquatic and riparian organisms. Field-based studies have led to qualitative conceptual models and to numerical stimulations of river processes involving wood. Numerous important gaps remain, however, in our understanding of wood dynamics. The majority of research on wood in rivers focuses on small- to medium-sized rivers, defined using the ratio of wood piece size to channel width as channels narrower than the locally typical wood-piece length (small) and slightly narrower than the longer wood pieces present (medium). Although diverse geographic regions and biomes are represented by one or a few studies in each region, the majority of research comes from perennial rivers draining temperate conifer forests. Regional syntheses most commonly focus on the Pacific Northwest region of North America where most of these studies originate. Consequently, significant gaps in our understanding include lack of knowledge of wood-related processes in large rivers, dryland rivers, and rivers of the high and low latitudes. Using a wood budget as an organizing framework, this paper identifies other gaps related to wood recruitment, transport, storage, and how beavers influence LW dynamics. With respect to wood recruitment, we lack information on the relative importance of mass tree mortality and transport of buried or surficial downed wood from the floodplain into the channel in diverse settings. Knowledge gaps related to wood transport include transport distances of LW and thresholds for LW mobility in small to medium rivers. With respect to wood storage, we have limited data on longitudinal trends in LW loads within unaltered large and great rivers and on fluctuations in LW load over time intervals greater than a few years. Other knowledge gaps relate to physical and ecological effects of wood, including the magnitude of flow resistance caused by LW; patterns of wood-related sediment storage for diverse river sizes and channel geometry; quantification of channel-floodplain-LW interactions; and potential threshold effects of LW in relation to physical processes and biotic communities. Finally, knowledge gaps are related to management of large wood and river corridors, including understanding the consequences of enormous historical reductions in LW load in rivers through the forested portions of the temperate zone; and how to effectively reintroduce and manage existing LW in river corridors, which includes enhancing public understanding of the importance of LW. Addressing these knowledge gaps requires more case studies from diverse rivers, as well as more syntheses and metadata analyses.

No evidence for intercohort cannibalism in mixed-size cultures of food-size and fingerling hybrid catfish (channel catfish x blue catfish) grown in ponds in winter or summer

USDA-ARS?s Scientific Manuscript database

Hybrid catfish (' Channel Catfish Ictalurus punctatus X ' Blue Catfish I. furcatus) are normally harvested by seining single-batch pond production systems in fall or winter. Ponds are typically restocked without draining. There is concern that without completely draining the pond after harvest, food...

Optimization of a Deep Convective Cloud Technique in Evaluating the Long-Term Radiometric Stability of MODIS Reflective Solar Bands

NASA Technical Reports Server (NTRS)

Mu, Qiaozhen; Wu, Aisheng; Xiong, Xiaoxiong; Doelling, David R.; Angal, Amit; Chang, Tiejun; Bhatt, Rajendra

2017-01-01

MODIS reflective solar bands are calibrated on-orbit using a solar diffuser and near-monthly lunar observations. To monitor the performance and effectiveness of the on-orbit calibrations, pseudo-invariant targets such as deep convective clouds (DCCs), Libya-4, and Dome-C are used to track the long-term stability of MODIS Level 1B product. However, the current MODIS operational DCC technique (DCCT) simply uses the criteria set for the 0.65- m band. We optimize several critical DCCT parameters including the 11- micrometer IR-band Brightness Temperature (BT11) threshold for DCC identification, DCC core size and uniformity to help locate DCCs at convection centers, data collection time interval, and probability distribution function (PDF) bin increment for each channel. The mode reflectances corresponding to the PDF peaks are utilized as the DCC reflectances. Results show that the BT11 threshold and time interval are most critical for the Short Wave Infrared (SWIR) bands. The Bidirectional Reflectance Distribution Function model is most effective in reducing the DCC anisotropy for the visible channels. The uniformity filters and PDF bin size have minimal impacts on the visible channels and a larger impact on the SWIR bands. The newly optimized DCCT will be used for future evaluation of MODIS on-orbit calibration by MODIS Characterization Support Team.

Assessment of an in-channel redistribution technique for large woody debris management in Locust Creek, Linn County, Missouri

USGS Publications Warehouse

Heimann, David C.

2017-10-24

The U.S. Geological Survey, in cooperation with the Missouri Department of Conservation and Missouri Department of Natural Resources, completed a study to assess a mechanical redistribution technique used for the management of large woody debris (LWD) jams in Locust Creek within Pershing State Park and Fountain Grove Conservation Area, Linn County, Missouri. Extensive LWD jams were treated from 1996 to 2009 using a low-impact technique in which LWD from the jams was redistributed to reopen the channel and to mimic the natural geomorphic process of channel migration and adjustment to an obstruction. The scope of the study included the comparison of selected channel geometry characteristics and bed material particle-size distribution in seven LWD treatment reaches with that of adjacent untreated reaches (unaffected by LWD accumulations) of Locust Creek. A comparison of 1996 and 2015 survey cross sections in treated and untreated reaches and photograph documentation were used to assess channel geomorphic change and the stability of redistributed LWD. The physical characteristics of LWD within jams present in the study reach during 2015–16 also were documented.Based on the general lack of differences in channel metrics between treated and untreated reaches, it can be concluded that the mechanical redistribution technique has been an effective treatment of extensive LWD jams in Locust Creek. Channel alterations, including aggradation, streamflow piracy, and diversions, have resulted in temporal and spatial changes in the Locust Creek channel that may affect future applications of the redistribution technique in Pershing State Park. The redistribution technique was used to effectively manage LWD in Locust Creek at a potentially lower financial cost and reduced environmental disturbance than the complete removal of LWD.A comparison of four channel metrics (bankfull cross-sectional area, channel width, streamflow capacity, and width-depth ratio) for individual treatment reaches with adjacent untreated reaches indicated no statistically significant difference in most comparisons. Where statistically significant differences in channel metrics were determined between individual reaches, the channel metrics in treatment reaches were significantly less than adjacent untreated reaches in some comparisons, and significantly greater than adjacent untreated reaches in others. Without immediate posttreatment cross sections in treated and untreated reaches for comparison, it is impossible to say with certainty that a lack of significant differences in channel metrics is a result of posttreatment channel adjustment or, conversely, that any significant differences that remain are a result of the treatment of LWD.Characteristics of LWD in accumulations sampled within the study area in 2015 indicate that most sampled pieces were in the 1–2 foot diameter size class, the 5–16 foot length class, and the advanced decay class. Most of documented LWD pieces were loose and not buried, about 20 percent on average had a root wad attached, and about 6.5 percent on average were sawn logs. Most of sampled material was less than one-half of the bankfull channel width, indicating it was easily transportable, and the advanced decay class of material entering the study area indicated that it was likely sourced from outside of Pershing State Park.Redistributed LWD associated with treatment seems to be intact in the 1996 treated reaches from direct observation and from inference because there was net channel aggradation between 1996 and 2015 in comparison surveys. The change in channel area resulting from aggradation in time (1996 to 2015) in treated and untreated reaches exceeded the differences in channel characteristics between the treated and untreated channels in 2015 surveys.

The effect of neutrally buoyant finite-size particles on channel flows in the laminar-turbulent transition regime

NASA Astrophysics Data System (ADS)

Loisel, Vincent; Abbas, Micheline; Masbernat, Olivier; Climent, Eric

2013-12-01

The presence of finite-size particles in a channel flow close to the laminar-turbulent transition is simulated with the Force Coupling Method which allows two-way coupling with the flow dynamics. Spherical particles with channel height-to-particle diameter ratio of 16 are initially randomly seeded in a fluctuating flow above the critical Reynolds number corresponding to single phase flow relaminarization. When steady-state is reached, the particle volume fraction is homogeneously distributed in the channel cross-section (ϕ ≅ 5%) except in the near-wall region where it is larger due to inertia-driven migration. Turbulence statistics (intensity of velocity fluctuations, small-scale vortical structures, wall shear stress) calculated in the fully coupled two-phase flow simulations are compared to single-phase flow data in the transition regime. It is observed that particles increase the transverse r.m.s. flow velocity fluctuations and they break down the flow coherent structures into smaller, more numerous and sustained eddies, preventing the flow to relaminarize at the single-phase critical Reynolds number. When the Reynolds number is further decreased and the suspension flow becomes laminar, the wall friction coefficient recovers the evolution of the laminar single-phase law provided that the suspension viscosity is used in the Reynolds number definition. The residual velocity fluctuations in the suspension correspond to a regime of particulate shear-induced agitation.

Effect of the size of experimental channels of the lead slowing-down spectrometer SVZ-100 (Institute for Nuclear Research, Moscow) on the moderation constant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Latysheva, L. N.; Bergman, A. A.; Sobolevsky, N. M., E-mail: sobolevs@inr.ru

Lead slowing-down (LSD) spectrometers have a low energy resolution (about 30%), but their luminosity is 10{sup 3} to 10{sup 4} times higher than that of time-of-flight (TOF) spectrometers. A high luminosity of LSD spectrometers makes it possible to use them to measure neutron cross section for samples of mass about several micrograms. These features specify a niche for the application of LSD spectrometers in measuring neutron cross sections for elements hardly available in macroscopic amounts-in particular, for actinides. A mathematical simulation of the parameters of SVZ-100 LSD spectrometer of the Institute for Nuclear Research (INR, Moscow) is performed in themore » present study on the basis of the MCNPX code. It is found that the moderation constant, which is the main parameter of LSD spectrometers, is highly sensitive to the size and shape of detecting volumes in calculations and, hence, to the real size of experimental channels of the LSD spectrometer.« less

Determination of optimal lot size and production rate for multi-production channels with limited capacity

NASA Astrophysics Data System (ADS)

Huang, Yeu-Shiang; Wang, Ruei-Pei; Ho, Jyh-Wen

2015-07-01

Due to the constantly changing business environment, producers often have to deal with customers by adopting different procurement policies. That is, manufacturers confront not only predictable and regular orders, but also unpredictable and irregular orders. In this study, from the perspective of upstream manufacturers, both regular and irregular orders are considered in coping with the situation in which an uncertain demand is faced by the manufacturer, and a capacity confirming mechanism is used to examine such demand. If the demand is less than or equal to the capacity of the ordinary production channel, the general supply channel is utilised to fully account for the manufacturing process, but if the demand is greater than the capacity of the ordinary production channel, the contingency production channel would be activated along with the ordinary channel to satisfy the upcoming high demand. Besides, the reproductive property of the probability distribution is employed to represent the order quantity of the two types of demand. Accordingly, the optimal production rates and lot sizes for both channels are derived to provide managers with insights for further production planning.

Development of a passive micromixer based on repeated fluid twisting and flattening, and its application to DNA purification.

PubMed

Lee, Nae Yoon; Yamada, Masumi; Seki, Minoru

2005-11-01

We have developed a three-dimensional passive micromixer based on new mixing principles, fluid twisting and flattening. This micromixer is constructed by repeating two microchannel segments, a "main channel" and a "flattened channel", which are very different in size and are arranged perpendicularly. At the intersection of these segments the fluid inside the micromixer is twisted and then, in the flattened channel, the diffusion length is greatly reduced, achieving high mixing efficiency. Several types of micromixer were fabricated and the effect of microchannel geometry on mixing performance was evaluated. We also integrated this micromixer with a miniaturized DNA purification device, in which the concentration of the buffer solution could be rapidly changed, to perform DNA purification based on solid-phase extraction.

Two-Channel Satellite Retrievals of Aerosol Properties: An Overview

NASA Technical Reports Server (NTRS)

Mishchenko, Michael I.

1999-01-01

In order to reduce current uncertainties in the evaluation of the direct and indirect effects of tropospheric aerosols on climate on the global scale, it has been suggested to apply multi-channel retrieval algorithms to the full period of existing satellite data. This talk will outline the methodology of interpreting two-channel satellite radiance data over the ocean and describe a detailed analysis of the sensitivity of retrieved aerosol parameters to the assumptions made in different retrieval algorithms. We will specifically address the calibration and cloud screening issues, consider the suitability of existing satellite data sets to detecting short- and long-term regional and global changes, compare preliminary results obtained by several research groups, and discuss the prospects of creating an advanced retroactive climatology of aerosol optical thickness and size over the oceans.

Hydraulic modeling of stream channels and structures in Harbor and Crow Hollow Brooks, Meriden, Connecticut

USGS Publications Warehouse

Weiss, Lawrence A.; Sears, Michael P.; Cervione, Michael A.

1994-01-01

Effects of urbanization have increased the frequency and size of floods along certain reaches of Harbor Brook and Crow Hollow Brook in Meriden, Conn. A floodprofile-modeling study was conducted to model the effects of selected channel and structural modifications on flood elevations and inundated areas. The study covered the reach of Harbor Brook downstream from Interstate 691 and the reach of Crow Hollow Brook downstream from Johnson Avenue. Proposed modifications, which include changes to bank heights, channel geometry, structural geometry, and streambed armoring on Harbor Brook and changes to bank heights on Crow Hollow Brook, significantly lower flood elevations. Results of the modeling indicate a significant reduction of flood elevations for the 10-year, 25-year, 35-year, 50-year, and 100-year flood frequencies using proposed modifications to (1 ) bank heights between Harbor Brook Towers and Interstate 691 on Harbor Brook, and between Centennial Avenue and Johnson Avenue on Crow Hollow Brook; (2) channel geometry between Coe Avenue and Interstate 69 1 on Harbor Brook; (3) bridge and culvert opening geometry between Harbor Brook Towers and Interstate 691 on Harbor Brook; and (4) channel streambed armoring between Harbor Brook Towers and Interstate 691 on Harbor Brook. The proposed modifications were developed without consideration of cost-benefit ratios.

Reliable video transmission over fading channels via channel state estimation

NASA Astrophysics Data System (ADS)

Kumwilaisak, Wuttipong; Kim, JongWon; Kuo, C.-C. Jay

2000-04-01

Transmission of continuous media such as video over time- varying wireless communication channels can benefit from the use of adaptation techniques in both source and channel coding. An adaptive feedback-based wireless video transmission scheme is investigated in this research with special emphasis on feedback-based adaptation. To be more specific, an interactive adaptive transmission scheme is developed by letting the receiver estimate the channel state information and send it back to the transmitter. By utilizing the feedback information, the transmitter is capable of adapting the level of protection by changing the flexible RCPC (rate-compatible punctured convolutional) code ratio depending on the instantaneous channel condition. The wireless channel is modeled as a fading channel, where the long-term and short- term fading effects are modeled as the log-normal fading and the Rayleigh flat fading, respectively. Then, its state (mainly the long term fading portion) is tracked and predicted by using an adaptive LMS (least mean squares) algorithm. By utilizing the delayed feedback on the channel condition, the adaptation performance of the proposed scheme is first evaluated in terms of the error probability and the throughput. It is then extended to incorporate variable size packets of ITU-T H.263+ video with the error resilience option. Finally, the end-to-end performance of wireless video transmission is compared against several non-adaptive protection schemes.

Upper bounds on secret-key agreement over lossy thermal bosonic channels

NASA Astrophysics Data System (ADS)

Kaur, Eneet; Wilde, Mark M.

2017-12-01

Upper bounds on the secret-key-agreement capacity of a quantum channel serve as a way to assess the performance of practical quantum-key-distribution protocols conducted over that channel. In particular, if a protocol employs a quantum repeater, achieving secret-key rates exceeding these upper bounds is evidence of having a working quantum repeater. In this paper, we extend a recent advance [Liuzzo-Scorpo et al., Phys. Rev. Lett. 119, 120503 (2017), 10.1103/PhysRevLett.119.120503] in the theory of the teleportation simulation of single-mode phase-insensitive Gaussian channels such that it now applies to the relative entropy of entanglement measure. As a consequence of this extension, we find tighter upper bounds on the nonasymptotic secret-key-agreement capacity of the lossy thermal bosonic channel than were previously known. The lossy thermal bosonic channel serves as a more realistic model of communication than the pure-loss bosonic channel, because it can model the effects of eavesdropper tampering and imperfect detectors. An implication of our result is that the previously known upper bounds on the secret-key-agreement capacity of the thermal channel are too pessimistic for the practical finite-size regime in which the channel is used a finite number of times, and so it should now be somewhat easier to witness a working quantum repeater when using secret-key-agreement capacity upper bounds as a benchmark.

The Role of Conjoining (Tie) Channels in Lowland Floodplain Development and Lake Infilling

NASA Astrophysics Data System (ADS)

Rowland, J. C.; Dietrich, W. E.; Day, G.; Lepper, K.; Wilson, C. J.

2003-12-01

In simple models of lowland river systems, water and sediment enter the main stem via tributary and secondary channels and are only redistributed to the floodplain during overbank and crevasse splay events. Along numerous river systems across the globe, however, water and sediment are regularly exchanged between the river and off river water bodies via stable, narrow channels. These channels, known as tie channels on the Fly River in Papua New Guinea and batture channels along the lower Mississippi, are largely overlooked but important components of floodplain sediment dispersal where they exist. These channels become pathways of sediment dispersal to the floodplain system when elevated river stages force sediment-laden flows into the off-river water bodies. On the Fly River, it is estimated that about 50% of the sediment delivery to the floodplain is via these channels, and along low gradient tributary channels during flood driven flow reversals. During low flow, tie channels serve to drain the floodplain. With the outgoing flows, large amounts sediment can be carried and lost to the floodplain; floodplain lakes progressively infill with sediment as the mouth of these channels steadily prograde lakeward. These lake deposits not only become significant stratigraphic components of floodplains (traditionally referred to as clay plugs), but are important local sinks recording hundreds to thousands of years of river history. As with all sinks, the proper interpretation of these stratigraphic records requires understanding the processes by which sediment is delivered to the sink and how these processes alter the paleohydraulic and climatic signals of interest. We have conducted field investigations of conjoining channels in Papua New Guinea (the Fly and Strickland Rivers), Louisiana (Raccourci Old River ~ 65 km upriver of Baton Rouge) and Alaska (Birch Creek). These field investigations include extensive surveys of both cross and along channel morphological trends, grain size characteristics, water levels and geochronological sampling using optically stimulated luminescence (OSL). Across all systems channel morphology is similar and exhibit scale independence, however, channel size and rates of progradation are directly related to the size of the main stem river. Through these studies and ongoing scaled modeling we are examining the morphodynamics that lead to the formation, advancement and stability of these unique self formed channels.

Channel narrowing and vegetation development following a great plains flood

USGS Publications Warehouse

Friedman, J.M.; Osterkamp, W.R.; Lewis, W.M.

1996-01-01

Streams in the plains of eastern Colorado are prone to intense floods following summer thunderstorms. Here, and in other semiarid and arid regions, channel recovery after a flood may take several decades. As a result, flood history strongly influences spatial and temporal variability in bottomland vegetation. Interpretation of these patterns must be based on understanding the long-term response of bottomland morphology and vegetation to specific floods. A major flood in 1965 on Plum Creek, a perennial sandbed stream, removed most of the bottomland vegetatiqn and transformed the single-thread stream into a wider, braided channel. Channel narrowing began in 1973 and continues today. In 1991, we determined occurrences of 150 vascular plant species in 341 plots (0.5 m2) along a 7-km reach of Plum Creek near Louviers, Colorado. We related patterns of vegetation to elevation, litter cover, vegetative cover, sediment particle size, shade, and year of formation of the underlying surface (based on age of the excavated root flare of the oldest woody plants). Geomorphic investigation determined that Plum Creek fluvial surfaces sort into five groups by year of formation: terraces of fine sand formed before 1965; terraces of coarse sand deposited by the 1965 flood; stable bars formed by channel narrowing during periods of relatively high bed level (1973-1986); stable bars similarly formed during a recent period of low bed level (1987-1990); and the present channel bed (1991). Canonical correspondence analysis indicates a strong influence of elevation and litter cover, and lesser effects of vegetative cover, shade, and sediment particle size. However, the sum of all canonical eigenvalues explained by these factors is less than that explained by an analysis including only the dummy variables that define the five geomorphically determined age groups. The effect of age group is significant even when all five other environmental variables are specified as covariables. Therefore, the process of postflood channel narrowing has a dominant influence on vegetation pattern. Channel narrowing at Plum Creek includes a successional process: annual and perennial plants become established on the channel bed, sediment accretes around the vegetation, and increasing litter cover, shade, and scarcity of water eliminate species that are not rhizomatous perennials. However, successional trajectories of individual surfaces are modified by flow-related fluctuations of the bed level; surfaces deposited by the 1965 flood have had distinct sediment and vegetation since their formation. Species richness is highest on surfaces dating to 1987-1990; the many species restricted to this transitory assemblage are perpetuated by flood-related fluctuations in channel width. Since the 1965 flood, seedling establishment of the dominant trees (genus Populus) has occurred only on low surfaces formed during channel narrowing. Thus, the flood has indirectly promoted Populus establishment over a 26-yr period.

Access channels to the buried active site control substrate specificity in CYP1A P450 enzymes.

PubMed

Urban, Philippe; Truan, Gilles; Pompon, Denis

2015-04-01

A cytochrome P450 active site is buried within the protein molecule and several channels connect the catalytic cavity to the protein surface. Their role in P450 catalysis is still matter of debate. The aim of this study was to understand the possible relations existing between channels and substrate specificity. Time course studies were carried out with a collection of polycyclic substrates of increasing sizes assayed with a library of wild-type and chimeric CYP1A enzymes. This resulted in a matrix of activities sufficiently large to allow statistical analysis. Multivariate statistical tools were used to decipher the correlation between observed activity shifts and sequence segment swaps. The global kinetic behavior of CYP1A enzymes toward polycyclic substrates is significantly different depending on the size of the substrate. Mutations which are close or lining the P450 channels significantly affect this discrimination, whereas mutations distant from the P450 channels do not. Size discrimination is taking place for polycyclic substrates at the entrance of the different P450 access channels. It is thus hypothesized that channels differentiate small from large substrates in CYP1A enzymes, implying that residues located at the surface of the protein may be implied in this differential recognition. Catalysis thus occurs after a two-step recognition process, one at the surface of the protein and the second within the catalytic cavity in enzymes with a buried active site. Copyright © 2014 Elsevier B.V. All rights reserved.

Bedload and river hydraulics - Inferences from the East Fork River, Wyoming

USGS Publications Warehouse

Leopold, Luna Bergere; Emmett, William W.

1997-01-01

During 1973-79, bedload data were collected in a sophisticated trap on a river of moderate size, the East Fork. The transport rate was measured most days through a full snowmelt season, and the rate was determined separately for eight zones across the channel width. The quantitative data are unique and unlikely to be repeated. Nor need they be, because as a result of this effort a practical bedload sampler was adequately tested against full river measurement.It was shown that bedload moves sporadically and randomly on the river bed. Therefore, transport rate is highly variable in short periods of time. There is also a wide variance from day to day. Yet, different rivers have transport rates, which are functions of discharge, depth, and sediment size, that are clearly distinct. Comparison of computed and measured transport rates indicates that a major problem remains: What grain size is representative of the bedload when there is a wide or heterogeneous particle-size distribution? Size of the bedload in motion may be very different from the size of bed material obtained from samples of the streambed.For general computation, the river channel slope may be averaged, and it may be assumed that water-surface slope does not change materially with changing discharge. Indeed, this generality is correct, in that, compared with depth, velocity, and width, slope is conservative at-a-station. However, in more detail, slope changes importantly with discharge in short reaches of channel, and those changes are very different in pool and riffle.These local changes in slope are not merely an aspect of a detailed longitudinal profile but involve cross-channel as well as down-channel components. The pool and riffle sequence involves not only undulation of bed elevation and bar formation on alternate sides of the channel, but alternation of the zone of superovulation of the water surface, and changing relation of watersurface slope to discharge. These details can be seen only in the full topography of the water surface. Riffles fill during high flow and scour at low flow. Changes in local water-surface slope illustrate this process. Pools are a storage zone for sediment in the low-flow season. Even though large volumes of sediment move, the distance moved is not large—in the East Fork River, sand of size 0.5-1 millimeter moved 650 meters during the 1979 snowmelt runoff season.Bedload transport is greatest over or near bars and not in the deepest part of the channel. Direct observation of the locus of sediment transport indicates that this locus moves from one side of the channel to the other in concert with the occurrence of alternate bars. Separately, data indicate that at constant stream power, transport rate increases as depth decreases.

Impact of geometric, thermal and tunneling effects on nano-transistors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hu, Langhua; Chen, Duan, E-mail: dchen10@uncc.edu; Wei, Guo-Wei

Electronic transistors are fundamental building blocks of large scale integrated circuits in modern advanced electronic equipments, and their sizes have been down-scaled to nanometers. Modeling and simulations in the framework of quantum dynamics have emerged as important tools to study functional characteristics of these nano-devices. This work explores the effects of geometric shapes of semiconductor–insulator interfaces, phonon–electron interactions, and quantum tunneling of three-dimensional (3D) nano-transistors. First, we propose a two-scale energy functional to describe the electron dynamics in a dielectric continuum of device material. Coupled governing equations, i.e., Poisson–Kohn–Sham (PKS) equations, are derived by the variational principle. Additionally, it ismore » found that at a given channel cross section area and gate voltage, the geometry that has the smallest perimeter of the channel cross section offers the largest channel current, which indicates that ultra-thin nanotransistors may not be very efficient in practical applications. Moreover, we introduce a new method to evaluate quantum tunneling effects in nanotransistors without invoking the comparison of classical and quantum predictions. It is found that at a given channel cross section area and gate voltage, the geometry that has the smallest perimeter of the channel cross section has the smallest quantum tunneling ratio, which indicates that geometric defects can lead to higher geometric confinement and larger quantum tunneling effect. Furthermore, although an increase in the phonon–electron interaction strength reduces channel current, it does not have much impact to the quantum tunneling ratio. Finally, advanced numerical techniques, including second order elliptic interface methods, have been applied to ensure computational accuracy and reliability of the present PKS simulation.« less

Taming axial dispersion in hydrodynamic chromatography columns through wall patterning

NASA Astrophysics Data System (ADS)

Adrover, Alessandra; Cerbelli, Stefano; Giona, Massimiliano

2018-04-01

A well-known limitation of hydrodynamic chromatography arises from the synergistic interaction between transverse diffusion and streamwise convection, which enhances axial dispersion through the Taylor-Aris mechanism. We show that a periodic sequence of slip/no-slip conditions at the channel walls (e.g., representing wall indentations hosting stable air pockets) can significantly reduce axial dispersion, thus enhancing separation performance. The theoretical/numerical analysis is based on a generalization of Brenner's macrotransport approach to solute transport, here modified to account for the finite-size of the suspended particles. The most effective dispersion-taming outcome is observed when the alternating sequence of slip/no-slip conditions yields non-vanishing cross-sectional flow components. The combination of these components with the hindering interaction between the channel boundaries and the finite-sized particles gives rise to a non-trivial solution of Brenner's problem on the unit periodic cell, where the cross-sectional particle number density departs from the spatially homogeneous condition. In turn, this effect impacts upon the solution of the so-called b-field defining the large-scale dispersion tensor, with an overall decremental effect on the axial dispersion coefficient and on the Height Equivalent of a Theoretical Plate.

Estuarine abandoned channel sedimentation rates record peak fluvial discharge magnitudes

NASA Astrophysics Data System (ADS)

Gray, A. B.; Pasternack, G. B.; Watson, E. B.

2018-04-01

Fluvial sediment deposits can provide useful records of integrated watershed expressions including flood event magnitudes. However, floodplain and estuarine sediment deposits evolve through the interaction of watershed/marine sediment supply and transport characteristics with the local depositional environment. Thus extraction of watershed scale signals depends upon accounting for local scale effects on sediment deposition rates and character. This study presents an examination of the balance of fluvial sediment dynamics and local scale hydro-geomorphic controls on alluviation of an abandoned channel in the Salinas River Lagoon, CA. A set of three sediment cores contained discrete flood deposits that corresponded to the largest flood events over the period of accretion from 1969 to 2007. Sedimentation rates scaled with peak flood discharge and event scale sediment flux, but were not influenced by longer scale hydro-meteorological activities such as annual precipitation and water yield. Furthermore, the particle size distributions of flood deposits showed no relationship to event magnitudes. Both the responsiveness of sedimentation and unresponsiveness of particle size distributions to hydro-sedimentological event magnitudes appear to be controlled by aspects of local geomorphology that influence the connectivity of the abandoned channel to the Salinas River mainstem. Well-developed upstream plug bar formation precluded the entrainment of coarser bedload into the abandoned channel, while Salinas River mouth conditions (open/closed) in conjunction with tidal and storm surge conditions may play a role in influencing the delivery of coarser suspended load fractions. Channel adjacent sediment deposition can be valuable records of hydro-meteorological and sedimentological regimes, but local depositional settings may dominate the character of short term (interdecadal) signatures.

Medium-sized aperture camera for Earth observation

NASA Astrophysics Data System (ADS)

Kim, Eugene D.; Choi, Young-Wan; Kang, Myung-Seok; Kim, Ee-Eul; Yang, Ho-Soon; Rasheed, Ad. Aziz Ad.; Arshad, Ahmad Sabirin

2017-11-01

Satrec Initiative and ATSB have been developing a medium-sized aperture camera (MAC) for an earth observation payload on a small satellite. Developed as a push-broom type high-resolution camera, the camera has one panchromatic and four multispectral channels. The panchromatic channel has 2.5m, and multispectral channels have 5m of ground sampling distances at a nominal altitude of 685km. The 300mm-aperture Cassegrain telescope contains two aspheric mirrors and two spherical correction lenses. With a philosophy of building a simple and cost-effective camera, the mirrors incorporate no light-weighting, and the linear CCDs are mounted on a single PCB with no beam splitters. MAC is the main payload of RazakSAT to be launched in 2005. RazakSAT is a 180kg satellite including MAC, designed to provide high-resolution imagery of 20km swath width on a near equatorial orbit (NEqO). The mission objective is to demonstrate the capability of a high-resolution remote sensing satellite system on a near equatorial orbit. This paper describes the overview of the MAC and RarakSAT programmes, and presents the current development status of MAC focusing on key optical aspects of Qualification Model.

Remote ischaemic preconditioning and prevention of cerebral injury.

PubMed

Rehni, Ashish K; Shri, Richa; Singh, Manjeet

2007-03-01

Bilateral carotid artery occlusion of 10 min followed by reperfusion for 24 hr was employed in present study to produce ischaemia and reperfusion induced cerebral injury in mice. Cerebral infarct size was measured using triphenyltetrazolium chloride staining. Short-term memory was evaluated using elevated plus maze. Inclined beam walking test was employed to assess motor incoordination. Bilateral carotid artery occlusion followed by reperfusion produced cerebral infarction and impaired short-term memory, motor co-ordination and lateral push response. A preceding episode of mesenteric artery occlusion for 15 min and reperfusion of 15 min (remote mesenteric ischaemic preconditioning) prevented markedly ischaemia-reperfusion-induced cerebral injury measured in terms of infarct size, loss of short-term memory, motor coordination and lateral push response. Glibenclamide (5 mg/kg, iv) a KATP channel blocker and caffeine (7 mg/kg, iv) an adenosine receptor blocker attenuated the neuroprotective effect of remote mesenteric ischaemic preconditioning. It may be concluded that neuroprotective effect of remote mesenteric ischaemic preconditioning may be due to activation of adenosine receptors and consequent activation of KATP channels in mice.

Size effects on plasticity and fatigue microstructure evolution in FCC single crystals

NASA Astrophysics Data System (ADS)

El-Awady, Jaafar Abbas

In aircraft structures and engines, fatigue damage is manifest in the progressive emergence of distributed surface cracks near locations of high stress concentrations. At the present time, reliable methods for prediction of fatigue crack initiation are not available, because the phenomenon starts at the atomic scale. Initiation of fatigue cracks is associated with the formation of Persistent slip bands (PSBs), which start at certain critical conditions inside metals with specific microstructure dimensions. The main objective of this research is to develop predictive computational capabilities for plasticity and fatigue damage evolution in finite volumes. In that attempt, a dislocation dynamics model that incorporates the influence of free and internal interfaces on dislocation motion is presented. The model is based on a self-consistent formulation of 3-D Parametric Dislocation Dynamics (PDD) with the Boundary Element method (BEM) to describe dislocation motion, and hence microscopic plastic flow in finite volumes. The developed computer models are bench-marked by detailed comparisons with the experimental data, developed at the Wright-Patterson Air Force Lab (WP-AFRL), by three dimensional large scale simulations of compression loading on micro-scale samples of FCC single crystals. These simulation results provide an understanding of plastic deformation of micron-size single crystals. The plastic flow characteristics as well as the stress-strain behavior of simulated micropillars are shown to be in general agreement with experimental observations. New size scaling aspects of plastic flow and work-hardening are identified through the use of these simulations. The flow strength versus the diameter of the micropillar follows a power law with an exponent equal to -0.69. A stronger correlation is observed between the flow strength and the average length of activated dislocation sources. This relationship is again a power law, with an exponent -0.85. Simulation results with and without the activation of cross-slip are compared. Discontinuous hardening is observed when cross-slip is included. Experimentally-observed size effects on plastic flow and work- hardening are consistent with a "weakest-link activation mechanism". In addition, the variations and periodicity of dislocation activation are analyzed using the Fast Fourier Transform (FFT). We then present models of localized plastic deformation inside Persistent Slip Band channels. We investigate the interaction between screw dislocations as they pass one another inside channel walls in copper. The model shows the mechanisms of dislocation bowing, dipole formation and binding, and dipole destruction as screw dislocations pass one another. The mechanism of (dipole passing) is assessed and interpreted in terms of the fatigue saturation stress. We also present results for the effects of the wall dipole structure on the dipole passing mechanism. The edge dislocation dipolar walls is seen to have an effect on the passing stress as well. It is shown that the passing stress in the middle of the channel is reduced by 11 to 23% depending on the initial configuration of the screw dislocations with respect to one another. Finally, from large scale simulations of the expansion process of the edge dipoles from the walls in the channel the screw dislocations in the PSB channels may not meet "symmetrically", i.e. precisely in the center of the channel but preferably a little on one or the other side. For this configuration the passing stress will be lowered which is in agreement to experimental observations.

Formation and maintenance of single-thread tie channels entering floodplain lakes: Observations from three diverse river systems

NASA Astrophysics Data System (ADS)

Rowland, J. C.; Dietrich, W. E.; Day, G.; Parker, G.

2009-06-01

Tie channels connect rivers to floodplain lakes on many lowland rivers and thereby play a central role in floodplain sedimentology and ecology; yet they are generally unrecognized and little studied. Here we report the results of field studies focused on tie channel origin and morphodynamics in the following three contrasting systems: the Middle Fly River (Papua New Guinea), the Lower Mississippi River, and Birch Creek in Alaska. Across these river systems, tie channels vary by an order of magnitude in size but exhibit the same characteristic morphology and appear to develop and evolve by a similar set of processes. In all three systems, the channels are characterized by a narrow, leveed, single-thread morphology with maximum width approximately one tenth the width of the mainstem river. The channels typically have a V-shaped cross section, unlike most fluvial channels. These channels develop as lakes become isolated from the river by sedimentation. Narrowing of the connection between river and lake causes a sediment-laden jet to develop. Levees develop along the margins of the jet leading to channel emergence and eventual levee aggradation to the height of the mainstem levees. Bidirectional flow in these channels is common. Outflows from the lake scour sediment and prevent channel blockage. We propose that channel geometry and size are then controlled by a dynamic balance between channel narrowing by suspended sediment deposition and incision and widening by mass failure of banks during outflows. Tie channels are laterally stable and may convey flow for hundreds to a few thousand of years.

Characteristics of hyperpolarization-activated cyclic nucleotide-gated channels in dorsal root ganglion neurons at different ages and sizes.

PubMed

Hou, Baohua; Chen, Hengling; Qu, Xiangwei; Lin, Xianguang; Luo, Fang; Li, Chenhong

2015-11-11

In rat's sensory neurons, hyperpolarization-activated inward currents (Ih) play an essential role in mediating action potentials and contributing to neuronal excitability. Classified by the size of neurons and ages, we studied the Ih and transcription levels of hyperpolarization-activated cyclic nucleotide-gated (HCN) channels using electrophysiology and the single-cell RT-PCR. In voltage-clamp studies, Ih and half-maximal activation voltage (V1/2) changed with age and size. An analysis of all HCN subtypes in dorsal root ganglion (DRG) neurons by single-cell RT-PCR was carried out. HCN1 and HCN3 in medium-small elderly neurons had a weak expression. HCN2 in newborns and HCN4 in elderly rats also had a weak expression. The aim of this study is to examine the age-related Ih and HCN channels subunits in different ages and sizes of DRG neurons. The results would be significant in understanding the physiological and pathophysiological function of different sizes of DRG neurons in different age periods.

Influence of Threshold for Bedrock Erosion on River Long Profile Development and Knickzone Retreat in Response to Tectonic Perturbation

NASA Astrophysics Data System (ADS)

Attal, M.; Hobley, D.; Cowie, P. A.; Whittaker, A. C.; Tucker, G. E.; Roberts, G. P.

2008-12-01

Prominent convexities in channel long profiles, or knickzones, are an expected feature of bedrock rivers responding to a change in the rate of base level fall driven by tectonic processes. In response to a change in relative uplift rate, the simple stream power model which is characterized by a slope exponent equal to unity predicts that knickzone retreat velocity is independent of uplift rate and that channel slope and uplift rate are linearly related along the reaches which have re-equilibrated with respect to the new uplift condition (i.e., downstream of the profile convexity). However, a threshold for erosion has been shown to introduce non- linearity between slope and uplift rate when associated with stochastic rainfall variability. We present field data regarding the height and retreat rates of knickzones in rivers upstream of active normal faults in the central Apennines, Italy, where excellent constraints exist on the temporal and spatial history of fault movement. The knickzones developed in response to an independently-constrained increase in fault throw rate 0.75 Ma. Channel characteristics and Shield stress values suggest that these rivers lie close to the detachment-limited end-member but the knickzone retreat velocity (calculated from the time since fault acceleration) has been found to scale systematically with the known fault throw rates, even after accounting for differences in drainage area. In addition, the relationship between measured channel slope and relative uplift rate is non-linear, suggesting that a threshold for erosion might be effective in this setting. We use the Channel-Hillslope Integrated Landscape Development (CHILD) model to quantify the effect of such a threshold on river long profile development and knickzone retreat in response to tectonic perturbation. In particular, we investigate the evolutions of 3 Italian catchments of different size characterized by contrasted degree of tectonic perturbation, using physically realistic threshold values based on sediment grain-size measurements along the studied rivers. We show that the threshold alone cannot account for field observations of the size, position and retreat rate of profile convexities and that other factors neglected by the simple stream power law (e.g. role of sediments) have to be invoked to explain the discrepancy between field observations and modeled topographies.

Peristaltic flow of Powell-Eyring fluid in curved channel with heat transfer: A useful application in biomedicine.

PubMed

Hina, S; Mustafa, M; Hayat, T; Alsaedi, A

2016-10-01

In this work, we explore the heat transfer characteristics in the peristaltic transport of Powell-Eyring fluid inside a curved channel with complaint walls. The study has motivation toward the understanding of blood flow in microcirculatory system. Formulation is developed in the existence of velocity slip and temperature jump conditions. Perturbation approach has been utilized to present series expressions of axial velocity and temperature distributions. Streamlines are prepared to analyze the interesting phenomenon of trapping. Moreover, the plots of heat transfer coefficient for a broad range of embedded parameters are presented and discussed. The results indicate that slip effects substantially influence the velocity and temperature distributions. Axial flow accelerates when slip parameter is incremented. Temperature rises and wall heat flux grows when viscous dissipation effect is strengthened. In contrast to the planar channels, here velocity and temperature functions do not exhibit symmetry with respect to the central line. In addition, bolus size and its shape are different in upper and lower portions of the channel. Heat transfer coefficient enlarges when the curvature effects are reduced. The behaviors of wall tension and wall mass parameters on the profiles are qualitatively similar. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Research on the laser transmission characteristics simulation and comprehensive test in complex channel environment

NASA Astrophysics Data System (ADS)

Fu, Qiang; Liu, Jianhua; Wang, Xiaoman; Jiang, Huilin; Liu, Zhi

2014-12-01

The laser transmission characteristics affected in the complex channel environment, which limits the performance of laser equipment and engineering application severely. The article aim at the influence of laser transmission in atmospheric and seawater channels, summarizes the foreign researching work of the simulation and comprehensive test regarding to the laser transmission characteristics in complex environment. And researched the theory of atmospheric turbulence effect, water attenuation features, and put forward the corresponding theoretical model. And researched the simulate technology of atmospheric channel and sea water channel, put forward the analog device plan, adopt the similar theory of flowing to simulate the atmosphere turbulence .When the flowing has the same condition of geometric limits including the same Reynolds, they must be similar to each other in the motivation despite of the difference in the size, speed, and intrinsic quality. On this basis, set up a device for complex channel simulation and comprehensive testing, the overall design of the structure of the device, Hot and Cold Air Convection Simulation of Atmospheric Turbulence, mainly consists of cell body, heating systems, cooling systems, automatic control system. he simulator provides platform and method for the basic research of laser transmission characteristics in the domestic.

Temporal and spatial scales of geomorphic adjustments to reduced competency following flow regulation in bedload-dominated systems

NASA Astrophysics Data System (ADS)

Curtis, Katherine E.; Renshaw, Carl E.; Magilligan, Francis J.; Dade, William B.

2010-05-01

Because of the combined effects of reduced sediment transport capacity and competency following flow regulation, morphological changes are expected to occur in channels downstream from dams and, specifically, at tributary junctions where local inputs of water and sediment occur. Using a combination of historical aerial photographs, mainstem- and tributary-channel pebble counts, and HEC-RAS flow modeling for two watersheds in south-central VT, one unregulated and the other regulated since 1961, we document the time series of post-regulation channel narrowing and associated bar growth due to the influx of tributary sediment. Channel adjustments at regulated tributary junctions have been significant in ca. 50 years following impoundment, with channels downstream of the confluences narrowing over 15% after an initial ca. 20-year lag before the onset of accelerated narrowing. Moreover, flow modeling suggests that downstream of regulated confluences, the modern median grain size ( d50) along the channel bed is immobile. No significant channel narrowing has occurred either above or below unregulated tributary junctions or on the mainstem upstream of regulated confluences. However, greater channel sediment fining is observed upstream of regulated confluences than above unregulated confluences. Thus, the primary mode of mainstem channel adjustment differs up- and downstream of regulated tributaries. These confluence effects have occurred where the tributary drainage area is only 0.2 times that of the mainstem, well below the threshold ratio of 0.6 required for significant geomorphic effects at unregulated confluences, highlighting the geomorphic scale shift of dams. Lastly, we evaluate the downstream length required for a river to recover from the impacts of impoundment and demonstrate that even distal locations are impacted by flow regulation. Unlike the impacts of flow regulation in the western US where channel incision and bar erosion predominate following impoundment, we find that in situations where bed incision is minimal and where sediment loads are low but bed caliber high, bar growth and channel narrowing are significant adjustments at tributary junctions following impoundment. Therefore, at our sites the effects of dams on reduced competency may be more profound than on reduced sediment transport capacity, highlighting the importance of geologic and geomorphic settings in understanding fluvial responses to impoundment.

On-chip Micro- and Nanofluidic Electrokinetic Injection and Separation for PEGylation Analysis

NASA Astrophysics Data System (ADS)

Shelton, Elijah; Baum, Mary; Morse, Dan; Pennathur, Sumita; Pennathur Nanofluidics Laboratory Collaboration; Morse Laboratory Collaboration

2012-11-01

We present an experimental study of micro- and nanofluidic electrokinetic injection and separation in borosilcate channels as a method for characterizing size and zeta potential of biomolecules-specifically polyethlylene glycol (PEG), keyhole limpet hemocyanine (KLH), and pegylated KLH. While pegylation (the conjugation of proteins with PEG) is an established technique for enhancing a protein's therapeutic properties, reliable characterization of these conjugations by traditional analysis techniques (i.e. gel-electrophoresis, zetasizer) remains a challenge. Using a three-step electrokinetic sequence (load, gate, and inject), FITC labeled species and a fluorescein tracer dye are injected into a channel where they separate according to differences in electrophoretic mobility. We find the average absolute mobility of pegylated subunit KLH in 1 micron channels to be 56% that of unpegylated subunit KLH. In a 250 nm channel, we measure a 33% shift in the average absolute mobility of PEG dendrimers as compared to measurements in a 1 micron channel. These results begin to demonstrate how a micro- and nanofluidic-based approach might address the demand for effective and accessible nanoparticle characterization platforms. Supported by the Institute for Collaborative Biotechnologies.

Analysis of the performance of a wireless optical multi-input to multi-output communication system.

PubMed

Bushuev, Denis; Arnon, Shlomi

2006-07-01

We investigate robust optical wireless communication in a highly scattering propagation medium using multielement optical detector arrays. The communication setup consists of synchronized multiple transmitters that send information to a receiver array and an atmospheric propagation channel. The mathematical model that best describes this scenario is multi-input to multi-output communication through stochastic slow changing channels. In this model, signals from m transmitters are received by n receiver-detectors. The channel transfer function matrix is G, and its size is n x m. G(i,j) is the transfer function from transmitter i to detector j, and m > or = n. We adopt a quasi-stationary approach in which the channel time variation has a negligible effect on communication performance over a burst. The G matrix is calculated on the basis of the optical transfer function of the atmospheric channel (composed of aerosol and turbulence elements) and the receiver's optics. In this work we derive a performance model using environmental data, such as documented turbulence and aerosol models and noise statistics. We also present the results of simulations conducted for the proposed detection algorithm.

Performance of a Cylindrical Hall-Effect Thruster Using Permanent Magnets

NASA Technical Reports Server (NTRS)

Polzin, Kurt A.; Raitses, Y.; Merino, E.; Fisch, N. J.

2009-01-01

While annular Hall thrusters can operate at high efficiency at kW power levels, it is difficult to construct one that operates over a broad envelope from 1 kW down to 100 W while maintaining an efficiency of 45-55%. Scaling to low power while holding the main dimensionless parameters constant requires a decrease in the thruster channel size and an increase in the magnetic field strength. Increasing the magnetic field becomes technically challenging since the field can saturate the miniaturized inner components of the magnetic circuit and scaling down the magnetic circuit leaves very little room for magnetic pole pieces and heat shields. In addition, the central magnetic pole piece defining the interior wall of the annular channel can experience excessive heat loads in a miniaturized Hall thruster, with the temperature eventually exceeding the Curie temperature of the material and in extreme circumstances leading to accelerated erosion of the channel wall. An alternative approach is to employ a cylindrical Hall thruster (CHT) geometry. Laboratory model CHTs have operated at power levels ranging from 50 W up to 1 kW. These thrusters exhibit performance characteristics that are comparable to conventional, annular Hall thrusters of similar size. Compared to the annular Hall thruster, the CHTs insulator surface area to discharge chamber volume ratio is lower. Consequently, there is the potential for reduced wall losses in the channel of a CHT, and any reduction in wall losses should translate into lower channel heating rates and reduced erosion, making the CHT geometry promising for low-power applications. This potential for high performance in the low-power regime has served as the impetus for research and development efforts aimed at understanding and improving CHT performance. Recently, a 2.6 cm channel diameter permanent magnet CHT (shown in Fig. 1) was tested. This thruster has the promise of reduced power consumption over previous CHT iterations that employed electromagnets. Data are presented to expose the effect different controllable parameters have on the discharge and to summarize performance measurements (thrust, Isp, efficiency) obtained using a thrust stand. In addition, beam current data are presented to show the effect of the magnetic field topology on the plume profile and current utilization and to gain insight into the thruster s operation. These data extend and improve upon the results previously presented by the authors in Ref. [1].

The effect of grain size on aluminum anodes for Al-air batteries in alkaline electrolytes

NASA Astrophysics Data System (ADS)

Fan, Liang; Lu, Huimin

2015-06-01

Aluminum is an ideal material for metallic fuel cells. In this research, different grain sizes of aluminum anodes are prepared by equal channel angular pressing (ECAP) at room temperature. Microstructure of the anodes is examined by electron backscatter diffraction (EBSD) in scanning electron microscope (SEM). Hydrogen corrosion rates of the Al anodes in 4 mol L-1 NaOH are determined by hydrogen collection method. The electrochemical properties of the aluminum anodes are investigated in the same electrolyte using electrochemical impedance spectroscopy (EIS) and polarization curves. Battery performance is also tested by constant current discharge at different current densities. Results confirm that the electrochemical properties of the aluminum anodes are related to grain size. Finer grain size anode restrains hydrogen evolution, improves electrochemical activity and increases anodic utilization rate. The proposed method is shown to effectively improve the performance of Al-air batteries.

Solid freeform fabrication of biomaterials

NASA Astrophysics Data System (ADS)

Chu, Tien-Min Gabriel

1999-12-01

The biological performance of porous Hydroxyapatite (HA) is closely related to the pore architecture in the implants. The study on the effect of architecture to the biological performance of porous HA requires new manufacturing methods that can fabricate implants with controlled pores channels. In this thesis, four highly loaded HA and alumina suspensions were formulated and three different processes involving Solid Freeform Fabrication (SFF) were developed. An aqueous HA suspension in acrylamides was first formulated and the UV-curing properties were evaluated. With a medical grade HA powder, two non-aqueous HA suspensions were formulated: a 40 vol.% HA suspension in Hexanediol Diacrylate (HDDA) and a 40 vol.% HA suspension in 1:1 mix of Propoxylated Neopentyl Glycol Diacrylate (PNPGDA) and Isobomyl Acrylate (EBA). A 50 vol.% Alumina suspension in PNPGDA/IBA was also formulated. The effect of dispersant to the viscosity of the suspensions was characterized. In the Stereolithography (SL) method, the curing parameters of HA/HDDA and HA/PNPGDA/IBA were determined. Prototype HA implants with 1,700 mum internal channels were built directly on an SL Apparatus (SLA). The designed internal channel patterns were preserved after sintering. In the Ink-jet printing method, the high temperature flow behaviors of the suspensions were characterized. The effects of solids loading to the viscosity of the suspensions were modeled with Krieger-Dougherty equation. Leveling theory developed in paint industry was employed to analyze the self-leveling capability of the suspensions. In the indirect SL method, the thermal curing behavior of HA and alumina suspensions were characterized. The total cure time was measured and the curing kinetics was modeled. Negative molds for the implants were designed and built on SLA with epoxy resin. HA/PNPGDA/IBA was cast into the mold and cured in an oven. The binders and the epoxy mold were pyrolyzed and the green bodies sintered. Internal channels with sizes in the range of 420 to 968 gm with standard deviation less than 50 mum were successfully built. The formulation and characterization techniques developed in this thesis were useful for evaluating the suspensions for SFF process. The manufacturing process developed in this thesis have provided new methods for controlling the channel size in porous HA implants.

Equal Channel Angular Pressing (ECAP) and Its Application to Grain Refinement of Al-Zn-Mg-Cu Alloy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tekeli, Sueleyman; Gueral, Ahmet

Microstructure of a metal can be considerably changed by severe plastic deformation techniques such as high pressure torsion, extrusion and equal-channel angular pressing (ECAP). Among these methods, ECAP is particularly attractive because it has a potential for introducing significant grain refinement and homogeneous microstructure into bulk materials. Typically, it reduces the grain size to the submicrometer level or even nanometer range and thus produces materials that are capable of exhibiting unusual mechanical properties. In the present study, a test unites for equal channel angular pressing was constructed and this system was used for Al-Zn-Mg-Cu alloy. After the optimization tests, itmore » was seen that the most effective lubricant for the dies was MoS{sub 2}, the pressing pressure was around 25-35 ton and the pressing speed was 2 mm/s. By using these parameters, the Al-Zn-Mg-Cu alloy was successfully ECAPed up to 14 passes at 200 deg. C using route C. After ECAP tests, the specimens were characterized by transmission electron microscope (TEM), hardness and macrostructural investigations. It was seen that the plastic deformation in the ECAPed specimens occurred from edge to the centre like whirlpool. In addition, the deformation intensity increased with increasing pass number. The grain size of the specimens effectively also decreased with increasing pass number. That is, while the grain size of unECAPed specimen was 10 {mu}m, this value decreased to 300 nm after 14 passes. At the beginning, while there was a banding tendency in the grains toward deformation direction, homogeneous and equiaxed grains were formed with increasing pass number. This grain refinement was as a result of an interaction between shear strain and thermal recovery during ECAP processing. Hardness measurements showed that the hardness values increased up to 4 passes, decreased effectively at 6th pass, again increased at 8th pass and after this pass, the hardness again decreased due to dynamic recrystallization.« less

Variability of bed mobility in natural, gravel-bed channels and adjustments to sediment load at local and reach scales

Treesearch

Thomas E. Lisle; Jonathan M. Nelson; John Pitlick; Mary Ann Madej; Brent L. Barkett

2000-01-01

Abstract - Local variations in boundary shear stress acting on bed-surface particles control patterns of bed load transport and channel evolution during varying stream discharges. At the reach scale a channel adjusts to imposed water and sediment supply through mutual interactions among channel form, local grain size, and local flow dynamics that govern bed mobility...

Effect of channel width variation on sediment transport in mixed alluvial-bedrock rivers - from case study to concept

NASA Astrophysics Data System (ADS)

Cook, Kristen; Turowski, Jens; Hovius, Niels

2017-04-01

In mixed bedrock-alluvial rivers, the response of the system to a flood event can be affected by a number of factors, including coarse sediment availability in the channel, sediment supply from the hillslopes, bedrock-controlled changes in channel width, and the shape of the hydrograph. Local hydraulics and therefore bedload transport capacity depend on discharge and channel geometry, typically quantified by channel width and bed slope. However, the influence of channel width on total bedload transport capacity depends on discharge. For a given slope, narrow channels are more efficient than wide ones at low discharges, while wider channels are more efficient at higher discharges. Therefore, abrupt changes in downstream channel width may affect bedload flux through a channel and have important influences on channel behavior. We use the model sedFlow (Heimann et al., 2014) to explore this effect. We ran the model in a 4.5 km long channel, the center of which contains a 1 km gorge section with a width of 15 m, bounded upstream and downstream by sections with widths of 50 m. We imposed a discharge time series with a random sequence of floods of different size. The channel responds to the imposed floods in complex ways. At high discharges, the gorge reach transports less total sediment than the wide reaches, leading to aggradation in the upper part of the gorge and upstream and erosion in the lower part of the gorge and downstream. At lower discharges, the gorge becomes more efficient at transporting sediment and the trends reverse. The channel may experience both of these regimes during the peak and recession periods of a single flood, leading to a highly dynamic channel bed. This is consistent with observations from the Daan River gorge in western Taiwan, where we observe substantial intra-flood variations in channel bed elevation. Our modeling suggests that width differences alone can drive substantial variations in sediment flux and bed response, without the need for variations in sediment supply or mobility. Because the relationship between channel width and sediment transport capacity depends on the discharge, the long-term response of a channel with variable width depends on the entire hydrograph, not just on the flood peak. In addition, the net effect of a flood depends strongly on the preceding sequence of floods, as the long profile and channel slopes are continually adjusting to different forcing. Therefore modeling studies that use uniform discharge or a step function discharge will miss these dynamics. The fluctuations in sediment transport rates that result from width variations can lead to intermittent bed exposure, driving incision in different segments of the channel during different segments of the hydrograph.

The combination of the error correction methods of GAFCHROMIC EBT3 film

PubMed Central

Li, Yinghui; Chen, Lixin; Zhu, Jinhan; Liu, Xiaowei

2017-01-01

Purpose The aim of this study was to combine a set of methods for use of radiochromic film dosimetry, including calibration, correction for lateral effects and a proposed triple-channel analysis. These methods can be applied to GAFCHROMIC EBT3 film dosimetry for radiation field analysis and verification of IMRT plans. Methods A single-film exposure was used to achieve dose calibration, and the accuracy was verified based on comparisons with the square-field calibration method. Before performing the dose analysis, the lateral effects on pixel values were corrected. The position dependence of the lateral effect was fitted by a parabolic function, and the curvature factors of different dose levels were obtained using a quadratic formula. After lateral effect correction, a triple-channel analysis was used to reduce disturbances and convert scanned images from films into dose maps. The dose profiles of open fields were measured using EBT3 films and compared with the data obtained using an ionization chamber. Eighteen IMRT plans with different field sizes were measured and verified with EBT3 films, applying our methods, and compared to TPS dose maps, to check correct implementation of film dosimetry proposed here. Results The uncertainty of lateral effects can be reduced to ±1 cGy. Compared with the results of Micke A et al., the residual disturbances of the proposed triple-channel method at 48, 176 and 415 cGy are 5.3%, 20.9% and 31.4% smaller, respectively. Compared with the ionization chamber results, the difference in the off-axis ratio and percentage depth dose are within 1% and 2%, respectively. For the application of IMRT verification, there were no difference between two triple-channel methods. Compared with only corrected by triple-channel method, the IMRT results of the combined method (include lateral effect correction and our present triple-channel method) show a 2% improvement for large IMRT fields with the criteria 3%/3 mm. PMID:28750023

Fabrication of channeled scaffolds with ordered array of micro-pores through microsphere leaching and indirect Rapid Prototyping technique.

PubMed

Tan, J Y; Chua, C K; Leong, K F

2013-02-01

Advanced scaffold fabrication techniques such as Rapid Prototyping (RP) are generally recognized to be advantageous over conventional fabrication methods in terms architectural control and reproducibility. Yet, most RP techniques tend to suffer from resolution limitations which result in scaffolds with uncontrollable, random-size pores and low porosity, albeit having interconnected channels which is characteristically present in most RP scaffolds. With the increasing number of studies demonstrating the profound influences of scaffold pore architecture on cell behavior and overall tissue growth, a scaffold fabrication method with sufficient architectural control becomes imperative. The present study demonstrates the use of RP fabrication techniques to create scaffolds having interconnected channels as well as controllable micro-size pores. Adopted from the concepts of porogen leaching and indirect RP techniques, the proposed fabrication method uses monodisperse microspheres to create an ordered, hexagonal closed packed (HCP) array of micro-pores that surrounds the existing channels of the RP scaffold. The pore structure of the scaffold is shaped using a single sacrificial construct which comprises the microspheres and a dissolvable RP mold that were sintered together. As such, the size of pores as well as the channel configuration of the scaffold can be tailored based on the design of the RP mold and the size of microspheres used. The fabrication method developed in this work can be a promising alternative way of preparing scaffolds with customized pore structures that may be required for specific studies concerning cell-scaffold interactions.

Beyond the threshold for motion: river channel geometry and grain size reflect sediment supply

NASA Astrophysics Data System (ADS)

Pfeiffer, A.; Finnegan, N. J.; Willenbring, J. K.

2016-12-01

In many gravel-bedded rivers, floods that fill the ch­­annel banks create just enough shear stress to move the median-sized gravel particles on the bed surface (D50). Because this observation is common and is supported by theory, the coincidence of bankfull flow and the incipient motion of D50 has become a­­ commonly employed assumption. However, not all natural gravel channels actually conform to this simple relationship; some channels maintain bankfull stresses far in excess of the critical stress required to initiate sediment transport. We use a database of >300 gravel-bedded rivers and >600 10Be-derived erosion rates from across North America to explore the hypothesis that sediment supply drives the magnitude of bankfull shear stress relative to the critical stress required to mobilize the median bed surface grain size. We find that the ratio of bankfull to critical stress is significantly higher in West Coast river reaches (2.47, n= 84) than in river reaches in the rest of the continent (1.03, n = 245). This pattern parallels trends in erosion rates (and hence sediment supplies). Supporting our hypothesis, we find a significant correlation between upstream erosion rate and local τ*bf/τ*c at sites where this comparison is possible. Our analysis reveals a decrease in bed surface armoring with increasing τ*bf/τ*c, suggesting that channels accommodate changes in sediment supply through adjustments in bed surface grain size, as predicted through numerical modeling. Our findings demonstrate that sediment supply is encoded in the bankfull hydraulic geometry of gravel-bedded channels through its control on bed surface grain size.

Geoecosystem-related dynamics of Acacia populations in the Israeli hyper-arid Arava Valley

NASA Astrophysics Data System (ADS)

Stavi, Ilan; Avni, Yoav; Yizhaq, Hezi; Bel, Golan; Ginat, Hanan

2017-04-01

Similar to other Middle-Eastern and North-African drylands, Acacia populations across the hyper-arid Arava Valley of Israel have experienced dramatic phonological changes during the last few decades. These changes have been expressed with high mortality rates and low recruitment rates. Species of the Acacia trees across the region include the A. pachyceras, A. raddiana, and A. tortilis. We studied the recruitment and decay rate of seedlings. Data obtained revealed that during a whole year after germination, overall survival rate of seedlings was 2%. Also, data showed that the main impediment to recruitment and survival of seedlings was insufficient access to soil-water, resulting in their mortality due to drying. Another, secondary impediment was imposed by erosional and depositional processes under heavy floods, resulting in the elimination or burial of seedlings. Modeling of results revealed that the drying of seedlings is defined with a constant mortality rate, which fits an exponential decay function. At the same time, seedling mortality due to fluvial processes is defined with a mortality rate that grows with time, which fits a Gaussian decay function. Also, we investigated the effect of latitude, basin size, and microhabitat on vitality of existing trees. Results showed negative effect of latitude on tree mortality, fitting with the generally greater precipitation rates in the northern- than in the southern- Arava Valley. At the same time, no effect on tree mortality was recorded for basin size, proposing that in such extreme drylands, runoff ratio becomes more non-linear with increasing watershed size because of the greater dominance of ephemeral stream transmission losses, as well as due to the partial storm area coverage. Nor did the location in microhabitat across the valley floor affect tree mortality rate, highlighting the bimodal effect of greater access to flood water, potentially increasing survivability of old trees, but at the same time, imposing risks for young trees. Additionally, we examined the impact of the type of channel's deposits on vitality and survivability of the Acacias. We found that compared to channels with a stony alluvium stratum, the mean tree density in channels incised in the red unit of the Early Pleistocene Zehiha Formation, characterized by hard layers of fine-grained reddish sediments, was 42% greater. Also, mean percentage of alive trees was significantly and 9% greater in these channels than that in the channels composed of stony alluvial stratum. The red unit was found to have a threefold greater available water capacity than that in the stony alluvium. It was concluded that once long-term droughts or climatic change occur in this hyper-arid region, the red unit deposit alleviates water stress for trees, increasing their vitality and survivability.

Single water channels of aquaporin-1 do not obey the Kedem-Katchalsky equations.

PubMed

Curry, M R; Shachar-Hill, B; Hill, A E

2001-05-15

The Kedem-Katchalsky (KK) equations are often used to obtain information about the osmotic properties and conductance of channels to water. Using human red cell membranes, in which the osmotic flow is dominated by Aquaporin-1, we show here that compared to NaCl the reflexion coefficient of the channel for methylurea, when corrected for solute volume exchange and for the water permeability of the lipid membrane, is 0.54. The channels are impermeable to these two solutes which would seem to rule out flow interaction and require a reflexion coefficient close to 1.0 for both. Thus, two solutes can give very different osmotic flow rates through a semi-permeable pore, a result at variance with both classical theory and the KK formulation. The use of KK equations to analyze osmotic volume changes, which results in a single hybrid reflexion coefficient for each solute, may explain the discrepancy in the literature between such results and those where the equations have not been employed. Osmotic reflexion coefficients substantially different from 1.0 cannot be ascribed to the participation of other 'hidden' parallel aqueous channels consistently with known properties of the membrane. Furthermore, we show that this difference cannot be due to second-order effects, such as a solute-specific interaction with water in only part of the channel, because the osmosis is linear with driving force down to zero solute concentration, a finding which also rules out the involvement of unstirred-layer effects. Reflexion coefficients smaller than 1.0 do not necessitate water-solute flow interaction in permeable aqueous channels; rather, the osmotic behaviour of impermeable molecular-sized pores can be explained by differences in the fundamental nature of water flow in regions either accessible or inaccessible to solute, created by a varying cross-section of the channel.

Top-gated field-effect LaAlO{sub 3}/SrTiO{sub 3} devices made by ion-irradiation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hurand, S.; Jouan, A.; Feuillet-Palma, C.

2016-02-01

We present a method to fabricate top-gated field-effect devices in a LaAlO{sub 3}/SrTiO{sub 3} two-dimensional electron gas (2-DEG). Prior to the gate deposition, the realisation of micron size conducting channels in the 2-DEG is achieved by an ion-irradiation with high-energy oxygen ions. After identifying the ion fluence as the key parameter that determines the electrical transport properties of the channels, we demonstrate the field-effect operation. At low temperature, the normal state resistance and the superconducting T{sub c} can be tuned over a wide range by a top-gate voltage without any leakage. A superconductor-to-insulator quantum phase transition is observed for amore » strong depletion of the 2-DEG.« less

Determining size-specific emission factors for environmental tobacco smoke particles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Klepeis, Neil E.; Apte, Michael G.; Gundel, Lara A.

Because size is a major controlling factor for indoor airborne particle behavior, human particle exposure assessments will benefit from improved knowledge of size-specific particle emissions. We report a method of inferring size-specific mass emission factors for indoor sources that makes use of an indoor aerosol dynamics model, measured particle concentration time series data, and an optimization routine. This approach provides--in addition to estimates of the emissions size distribution and integrated emission factors--estimates of deposition rate, an enhanced understanding of particle dynamics, and information about model performance. We applied the method to size-specific environmental tobacco smoke (ETS) particle concentrations measured everymore » minute with an 8-channel optical particle counter (PMS-LASAIR; 0.1-2+ micrometer diameters) and every 10 or 30 min with a 34-channel differential mobility particle sizer (TSI-DMPS; 0.01-1+ micrometer diameters) after a single cigarette or cigar was machine-smoked inside a low air-exchange-rate 20 m{sup 3} chamber. The aerosol dynamics model provided good fits to observed concentrations when using optimized values of mass emission rate and deposition rate for each particle size range as input. Small discrepancies observed in the first 1-2 hours after smoking are likely due to the effect of particle evaporation, a process neglected by the model. Size-specific ETS particle emission factors were fit with log-normal distributions, yielding an average mass median diameter of 0.2 micrometers and an average geometric standard deviation of 2.3 with no systematic differences between cigars and cigarettes. The equivalent total particle emission rate, obtained integrating each size distribution, was 0.2-0.7 mg/min for cigars and 0.7-0.9 mg/min for cigarettes.« less

Distinct cellular distributions of Kv4 pore-forming and auxiliary subunits in rat dorsal root ganglion neurons.

PubMed

Matsuyoshi, Hiroko; Takimoto, Koichi; Yunoki, Takakazu; Erickson, Vickie L; Tyagi, Pradeep; Hirao, Yoshihiko; Wanaka, Akio; Yoshimura, Naoki

2012-09-17

Dorsal root ganglia contain heterogeneous populations of primary afferent neurons that transmit various sensory stimuli. This functional diversity may be correlated with differential expression of voltage-gated K(+) (Kv) channels. Here, we examine cellular distributions of Kv4 pore-forming and ancillary subunits that are responsible for fast-inactivating A-type K(+) current. Expression pattern of Kv α-subunit, β-subunit and auxiliary subunit was investigated using immunohistochemistry, in situ hybridization and RT-PCR technique. The two pore-forming subunits Kv4.1 and Kv4.3 show distinct cellular distributions: Kv4.3 is predominantly in small-sized C-fiber neurons, whereas Kv4.1 is seen in DRG neurons in various sizes. Furthermore, the two classes of Kv4 channel auxiliary subunits are also distributed in different-sized cells. KChIP3 is the only significantly expressed Ca(2+)-binding cytosolic ancillary subunit in DRGs and present in medium to large-sized neurons. The membrane-spanning auxiliary subunit DPP6 is seen in a large number of DRG neurons in various sizes, whereas DPP10 is restricted in small-sized neurons. Distinct combinations of Kv4 pore-forming and auxiliary subunits may constitute A-type channels in DRG neurons with different physiological roles. Kv4.1 subunit, in combination with KChIP3 and/or DPP6, form A-type K(+) channels in medium to large-sized A-fiber DRG neurons. In contrast, Kv4.3 and DPP10 may contribute to A-type K(+) current in non-peptidergic, C-fiber somatic afferent neurons. Copyright © 2012 Elsevier Inc. All rights reserved.

Experimental and theoretical study of the pyrrole cluster photochemistry: Closing the {pi}{sigma}{sup *} dissociation pathway by complexation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Poterya, Viktoriya; Profant, Vaclav; Farnik, Michal

Photolysis of size selected pyrrole clusters has been investigated and compared to the photolysis of an isolated pyrrole molecule. Experimentally, size distributions of different mean cluster sizes (n=3 and n>>5) have been prepared in supersonic expansions and the clusters were photolyzed at 243 and 193 nm. The kinetic energy distributions of the H photofragments have been measured. The distributions exhibit a bimodal character with fast and slow H-fragment peaks similar to the spectra of the bare molecule. However, with increasing cluster size the slow component gains intensity with respect to the fast one. A similar effect is observed with increasingmore » the excitation energy from 243 to 193 nm. Theoretical calculations at the CASSCF/CASPT2 level have been performed for bare and complexed pyrroles (pyrrole is complexed with an argon atom and with another pyrrole unit). Combination of theoretical and experimental approaches leads to the conclusion that the direct dissociative pathway along the {pi}{sigma}{sup *} potential energy surface in the N-H stretch coordinate is closed by the presence of the solvent molecule. This pathway is an important channel leading to the fast H atoms in the dissociation of the bare molecule. The solvent molecule influences significantly the electronic structure in the Rydberg-type {pi}{sigma}{sup *} state while it has little influence on the valence states. The slow channel is mostly populated by the out-of-plane deformation mode which is also not influenced by solvation. We have also studied other possible reaction channels in pyrrole clusters (hydrogen transfer, dimerization). The present study shows that more insight into the bulk behavior of biologically relevant molecules can be gained from cluster studies.« less

Enhancing the Damping Behavior of Dilute Zn-0.3Al Alloy by Equal Channel Angular Pressing

NASA Astrophysics Data System (ADS)

Demirtas, M.; Atli, K. C.; Yanar, H.; Purcek, G.

2017-06-01

The effect of grain size on the damping capacity of a dilute Zn-0.3Al alloy was investigated. It was found that there was a critical strain value (≈1 × 10-4) below and above which damping of Zn-0.3Al showed dynamic and static/dynamic hysteresis behavior, respectively. In the dynamic hysteresis region, damping resulted from viscous sliding of phase/grain boundaries, and decreasing grain size increased the damping capacity. While the quenched sample with 100 to 250 µm grain size showed very limited damping capacity with a loss factor tanδ of less than 0.007, decreasing grain size down to 2 µm by equal channel angular pressing (ECAP) increased tanδ to 0.100 in this region. Dynamic recrystallization due to microplasticity at the sample surface was proposed as the damping mechanism for the first time in the region where the alloy showed the combined aspects of dynamic and static hysteresis damping. In this region, tanδ increased with increasing strain amplitude, and ECAPed sample showed a tanδ value of 0.256 at a strain amplitude of 2 × 10-3, the highest recorded so far in the damping capacity-related studies on ZA alloys.

Pore-size dependence and characteristics of water diffusion in slitlike micropores

DOE PAGES

Diallo, S. O.

2015-07-16

The temperature dependence of the dynamics of water inside microporous activated carbon fibers (ACF) is investigated by means of incoherent elastic and quasielastic neutron-scattering techniques. The aim is to evaluate the effect of increasing pore size on the water dynamics in these primarily hydrophobic slit-shaped channels. Using two different micropore sizes (similar to 12 and 18 angstrom, denoted, respectively, ACF-10 and ACF-20), a clear suppression of the mobility of the water molecules is observed as the pore gap or temperature decreases. Suppression, we found, is accompanied by a systematic dependence of the average translational diffusion coefficient D-r and relaxation timemore » [tau(0)] of the restricted water on pore size and temperature. We observed D-r values and tested against a proposed scaling law, in which the translational diffusion coefficient D-r of water within a porous matrix was found to depend solely on two single parameters, a temperature-independent translational diffusion coefficient D-c associated with the water bound to the pore walls and the ratio theta of this strictly confined water to the total water inside the pore, yielding unique characteristic parameters for water transport in these carbon channels across the investigated temperature range.« less

KV7 channels in the human detrusor: channel modulator effects and gene and protein expression.

PubMed

Bientinesi, Riccardo; Mancuso, Cesare; Martire, Maria; Bassi, Pier Francesco; Sacco, Emilio; Currò, Diego

2017-02-01

Voltage-gated type 7 K + (K V 7 or KCNQ) channels regulate the contractility of various smooth muscles. With this study, we aimed to assess the role of K V 7 channels in the regulation of human detrusor contractility, as well as the gene and protein expression of K V 7 channels in this tissue. For these purposes, the isolated organ technique, RT-qPCR, and Western blot were used, respectively. XE-991, a selective K V 7 channel blocker, concentration-dependently contracted the human detrusor; mean EC 50 and E max of XE-991-induced concentration-response curve were 14.1 μM and 28.8 % of the maximal bethanechol-induced contraction, respectively. Flupirtine and retigabine, selective K V 7.2-7.5 channel activators, induced concentration-dependent relaxations of bethanechol-precontracted strips, with maximal relaxations of 51.6 and 51.8 % of the precontraction, respectively. XE-991 blocked the relaxations induced by flupirtine and retigabine. All five KCNQ genes were found to be expressed in the detrusor with KCNQ4 being the most expressed among them. Different bands, having sizes similar to some of reported K V 7.1, 7.4, and 7.5 channel subunit isoforms, were detected in the detrusor by Western blot with the K V 7.4 band being the most intense among them. In conclusion, K V 7 channels contribute to set the basal tone of the human detrusor. In addition, K V 7 channel activators significantly relax the detrusor. The K V 7.4 channels are probably the most important K V 7 channels expressed in the human detrusor. These data suggest that selective K V 7.4 channel activators might represent new pharmacological tools for inducing therapeutic relaxation of the detrusor.

Interaction of Zwitterionic Penicillins with the OmpF Channel Facilitates Their Translocation

PubMed Central

Danelon, Christophe; Nestorovich, Ekaterina M.; Winterhalter, Mathias; Ceccarelli, Matteo; Bezrukov, Sergey M.

2006-01-01

To study translocation of β-lactam antibiotics of different size and charge across the outer bacterial membrane, we combine an analysis of ion currents through single trimeric outer membrane protein F (OmpF) porins in planar lipid bilayers with molecular dynamics simulations. Because the size of penicillin molecules is close to the size of the narrowest part of the OmpF pore, penicillins occlude the pore during their translocation. Favorably interacting penicillins cause time-resolvable transient blockages of the small-ion current through the channel and thereby provide information about their dynamics within the pore. Analyzing these random fluctuations, we find that ampicillin and amoxicillin have a relatively high affinity for OmpF. In contrast, no or only a weak interaction is detected for carbenicillin, azlocillin, and piperacillin. Molecular dynamics simulations suggest a possible pathway of these drugs through the OmpF channel and rationalize our experimental findings. For zwitterionic ampicillin and amoxicillin, we identify a region of binding sites near the narrowest part of the channel pore. Interactions with these sites partially compensate for the entropic cost of drug confinement by the channel. Whereas azlocillin and piperacillin are clearly too big to pass through the channel constriction, dianionic carbenicillin does not find an efficient binding region in the constriction zone. Carbenicillin's favorable interactions are limited to the extracellular vestibule. These observations confirm our earlier suggestion that a set of high-affinity sites at the narrowest part of the OmpF channel improves a drug's ability to cross the membrane via the pore. PMID:16339889

Morphine-Induced Preconditioning: Involvement of Protein Kinase A and Mitochondrial Permeability Transition Pore

PubMed Central

Dorsch, Marianne; Behmenburg, Friederike; Raible, Miriam; Blase, Dominic; Grievink, Hilbert; Hollmann, Markus W.; Heinen, André; Huhn, Ragnar

2016-01-01

Background Morphine induces myocardial preconditioning (M-PC) via activation of mitochondrial large conductance Ca2+-sensitive potassium (mKCa) channels. An upstream regulator of mKCa channels is protein kinase A (PKA). Furthermore, mKCa channel activation regulates mitochondrial bioenergetics and thereby prevents opening of the mitochondrial permeability transition pore (mPTP). Here, we investigated in the rat heart in vivo whether 1) M-PC is mediated by activation of PKA, and 2) pharmacological opening of the mPTP abolishes the cardioprotective effect of M-PC and 3) M-PC is critically dependent on STAT3 activation, which is located upstream of mPTP within the signalling pathway. Methods Male Wistar rats were randomised to six groups (each n = 6). All animals underwent 25 minutes of regional myocardial ischemia and 120 minutes of reperfusion. Control animals (Con) were not further treated. Morphine preconditioning was initiated by intravenous administration of 0.3 mg/kg morphine (M-PC). The PKA blocker H-89 (10 μg/kg) was investigated with and without morphine (H-89+M-PC, H-89). We determined the effect of mPTP opening with atractyloside (5 mg/kg) with and without morphine (Atr+M-PC, Atr). Furthermore, the effect of morphine on PKA activity was tested in isolated adult rat cardiomyocytes. In further experiments in isolated hearts we tested the protective properties of morphine in the presence of STAT3 inhibition, and whether pharmacological prevention of the mPTP-opening by cyclosporine A (CsA) is cardioprotective in the presence of STAT3 inhibition. Results Morphine reduced infarct size from 64±5% to 39±9% (P<0.05 vs. Con). H-89 completely blocked preconditioning by morphine (64±9%; P<0.05 vs. M-PC), but H-89 itself had not effect on infarct size (61±10%; P>0.05 vs. Con). Also, atractyloside abolished infarct size reduction of morphine completely (65±9%; P<0.05 vs. M-PC) but had no influence on infarct size itself (64±5%; P>0.05 vs. Con). In isolated hearts STAT3 inhibitor Stattic completely abolished morphine-induced preconditioning. Administration of Stattic and mPTP inhibitor cyclosporine A reduced infarct size to 31±6% (Stat+CsA, P<0.05 vs. Con). Cyclosporine A alone reduced infarct size to 26±7% (CsA P<0.05 vs. Con). In cardiomyocytes, PKA activity was increased by morphine. Conclusion Our data suggest that morphine-induced cardioprotection is mediated by STAT3-activation and inhibition of mPTP, with STA3 located upstream of mPTP. There is some evidence that protein kinase A is involved within the signalling pathway. PMID:26968004

Study of condensation of refrigerants in a micro-channel for development of future compact micro-channel condensers

NASA Astrophysics Data System (ADS)

Chowdhury, Sourav

2009-12-01

Mini- and micro-channel technology has gained considerable ground in the recent years in industry and is favored due to its several advantages stemming from its high surface to volume ratio and high values of proof pressure it can withstand. Micro-channel technology has paved the way to development of highly compact heat exchangers with low cost and mass penalties. In the present work, the issues related to the sizing of compact micro-channel condensers have been explored. The considered designs encompass both the conventional and MEMS fabrication techniques. In case of MEMS-fabricated micro-channel condenser, wet etching of the micro-channel structures, followed by bonding of two such wafers with silicon nitride layers at the interface was attempted. It was concluded that the silicon nitride bonding requires great care in terms of high degree of surface flatness and absence of roughness and also high degree of surface purity and thus cannot be recommended for mass fabrication. Following this investigation, a carefully prepared experimental setup and test micro-channel with hydraulic diameter 700 mum and aspect ratio 7:1 was fabricated and overall heat transfer and pressure drop aspects of two condensing refrigerants, R134a and R245fa were studied at a variety of test conditions. To the best of author's knowledge, so far no data has been reported in the literature on condensation in such high aspect ratio micro-channels. Most of the published experimental works on condensation of refrigerants are concerning conventional hydraulic diameter channels (> 3mm) and only recently some experimental data has been reported in the sub-millimeter scale channels for which the surface tension and viscosity effects play a dominant role and the effect of gravity is diminished. It is found that both experimental data and empirically-derived correlations tend to under-predict the present data by an average of 25%. The reason for this deviation could be because a high aspect ratio channel tends to collect the condensate in the corners of its cross-section leaving only a thin liquid film on the flat side surfaces for better heat transfer than in circular or low aspect ratio channels.

Quenching of the Quantum Hall Effect in Graphene with Scrolled Edges

NASA Astrophysics Data System (ADS)

Cresti, Alessandro; Fogler, Michael M.; Guinea, Francisco; Castro Neto, A. H.; Roche, Stephan

2012-04-01

Edge nanoscrolls are shown to strongly influence transport properties of suspended graphene in the quantum Hall regime. The relatively long arclength of the scrolls in combination with their compact transverse size results in formation of many nonchiral transport channels in the scrolls. They short circuit the bulk current paths and inhibit the observation of the quantized two-terminal resistance. Unlike competing theoretical proposals, this mechanism of disrupting the Hall quantization in suspended graphene is not caused by ill-chosen placement of the contacts, singular elastic strains, or a small sample size.

On the performance evaluation of LQAM-MPPM techniques over exponentiated Weibull fading free-space optical channels

NASA Astrophysics Data System (ADS)

Khallaf, Haitham S.; Elfiqi, Abdulaziz E.; Shalaby, Hossam M. H.; Sampei, Seiichi; Obayya, Salah S. A.

2018-06-01

We investigate the performance of hybrid L-ary quadrature-amplitude modulation-multi-pulse pulse-position modulation (LQAM-MPPM) techniques over exponentiated Weibull (EW) fading free-space optical (FSO) channel, considering both weather and pointing-error effects. Upper bound and approximate-tight upper bound expressions for the bit-error rate (BER) of LQAM-MPPM techniques over EW FSO channels are obtained, taking into account the effects of fog, beam divergence, and pointing-error. Setup block diagram for both the transmitter and receiver of the LQAM-MPPM/FSO system are introduced and illustrated. The BER expressions are evaluated numerically and the results reveal that LQAM-MPPM technique outperforms ordinary LQAM and MPPM schemes under different fading levels and weather conditions. Furthermore, the effect of modulation-index is investigated and it turned out that a modulation-index greater than 0.4 is required in order to optimize the system performance. Finally, the effect of pointing-error introduces a great power penalty on the LQAM-MPPM system performance. Specifically, at a BER of 10-9, pointing-error introduces power penalties of about 45 and 28 dB for receiver aperture sizes of DR = 50 and 200 mm, respectively.

Using recurrent neural networks for adaptive communication channel equalization.

PubMed

Kechriotis, G; Zervas, E; Manolakos, E S

1994-01-01

Nonlinear adaptive filters based on a variety of neural network models have been used successfully for system identification and noise-cancellation in a wide class of applications. An important problem in data communications is that of channel equalization, i.e., the removal of interferences introduced by linear or nonlinear message corrupting mechanisms, so that the originally transmitted symbols can be recovered correctly at the receiver. In this paper we introduce an adaptive recurrent neural network (RNN) based equalizer whose small size and high performance makes it suitable for high-speed channel equalization. We propose RNN based structures for both trained adaptation and blind equalization, and we evaluate their performance via extensive simulations for a variety of signal modulations and communication channel models. It is shown that the RNN equalizers have comparable performance with traditional linear filter based equalizers when the channel interferences are relatively mild, and that they outperform them by several orders of magnitude when either the channel's transfer function has spectral nulls or severe nonlinear distortion is present. In addition, the small-size RNN equalizers, being essentially generalized IIR filters, are shown to outperform multilayer perceptron equalizers of larger computational complexity in linear and nonlinear channel equalization cases.

Rock riprap design for protection of stream channels near highway structures; Volume 2, Evaluation of Riprap design procedures

USGS Publications Warehouse

Blodgett, J.C.; McConaughy, C.E.

1986-01-01

In volume 2, seven procedures now being used for design of rock riprap installations were evaluated using data from 26 field sites. Four basic types of riprap failures were identified: Particle erosion, translational slide, modified slump, and slump. Factors associated with riprap failure include stone size , bank side slope, size gradation, thickness, insufficient toe or endwall, failure of the bank material, overtopping during floods, and geomorphic changes in the channel. A review of field data and the design procedures suggests that estimates of hydraulic forces acting on the boundary based on flow velocity rather than shear stress are more reliable. Several adjustments for local conditions, such as channel curvature, superelevation, or boundary roughness, may be unwarranted in view of the difficulty in estimating critical hydraulic forces for which the riprap is to be designed. Success of the riprap is related not only to the appropriate procedure for selecting stone size, but also to the reliability of estimated hydraulic and channel factors applicable to the site. (See also W89-04910) (Author 's abstract)

Modelling shoal margin collapses and their morphodynamic effect on channels and shoals in a sandy estuary

NASA Astrophysics Data System (ADS)

van Dijk, W. M.; Mastbergen, D. R.; Van der Werf, J. J.; Leuven, J.; Kleinhans, M. G.

2017-12-01

Channel bank failure and collapses of shoal margins due to flow slides have been recorded in Dutch estuaries for the past 200 years. The effects of these collapses on the morphodynamics of estuaries are unknown, but could potentially increase the dynamics of channel-shoal interactions by causing perturbations of up to a million cubic meters per event, which could impact habitats and navigability. The processes of shoal margin collapses are currently not included in numerical morphodynamic models. The objectives of this study are to investigate where shoal margins collapses typically occur, what their dimensions are, and to model how shoal margin collapses affect the morphodynamics at the channel-shoal scale. We identified 300 shoal margin collapses from bathymetry data of the Western Scheldt estuary for the period 1959-2015, and found that the shape of a shoal margin collapse is well represented by 1/3 of an ellipsoid, and that its volume has a log-normal distribution with an average of 100,000 m3. We implemented a parameterization for shoal margin collapses and tested their effects on morphodynamics in a Delft3D numerical model schematization of the Western Scheldt estuary. Three sets of scenarios were analyzed for near-field morphodynamics and far-field effects on flow pattern and channel-bar morphology: 1) an observed single shoal margin collapse of 2014, 2) collapses on various locations that are susceptible to collapses, and 3) our novel stochastic model producing collapses over a time span of a decade. Results show that single shoal margin collapses only affect the local dynamics in longitudinal direction and dampen out within a year when the collapse is small. When larger disturbances reach the seaward or landward sill at tidal channel junctions over a longer time span, the bed elevation at the sill increases on average and decrease the hydraulic geometry of the channel junctions. The extent of far-field effects is sensitive to the grain-size of the deposit, where finer sediments are transported further away. The location of the deposit across the channel matters for disturbing the region around the collapse, where sediment transport is highest for the strongest residual current. These results imply that disturbances caused by dredging and dumping may likewise affect the dynamics of channel junctions.

Influence of large wood on channel morphology and sediment storage in headwater mountain streams, Fraser Experimental Forest, Colorado

Treesearch

Sandra E. Ryan; Erica L. Bishop; J. Michael Daniels

2014-01-01

Large fallen wood can have a significant impact on channel form and process in forested mountain streams. In this study, four small channels on the Fraser Experimental Forest near Fraser, Colorado, USA, were surveyed for channel geometries and large wood loading, including the size, source, and characteristics of individual pieces. The study is part of a larger effort...

A 31-Channel MR Brain Array Coil Compatible with Positron Emission Tomography

PubMed Central

Sander, Christin Y.; Keil, Boris; Chonde, Daniel B.; Rosen, Bruce R.; Catana, Ciprian; Wald, Lawrence L.

2014-01-01

Purpose Simultaneous acquisition of MR and PET images requires the placement of the MR detection coil inside the PET detector ring where it absorbs and scatters photons. This constraint is the principal barrier to achieving optimum sensitivity on each modality. Here, we present a 31-channel PET-compatible brain array coil with reduced attenuation but improved MR sensitivity. Methods A series of component tests were performed to identify tradeoffs between PET and MR performance. Aspects studied include the remote positioning of preamplifiers, coax size, coil trace size/material, and plastic housing. We then maximized PET performance at minimal cost to MR sensitivity. The coil was evaluated for MR performance (SNR, g-factor) and PET attenuation. Results The coil design showed an improvement in attenuation by 190% (average) compared to conventional 32-channel arrays, and no loss in MR SNR. Moreover, the 31-channel coil displayed an SNR improvement of 230% (cortical ROI) compared to a PET-optimized 8-channel array with similar attenuation properties. Implementing attenuation correction of the 31-channel array successfully removed PET artifacts, which were comparable to those of the 8-channel array. Conclusion The design of the 31-channel PET-compatible coil enables higher sensitivity for PET/MR imaging, paving the way for novel applications in this hybrid-imaging domain. PMID:25046699

The effect of seed size variation in Quercus pacifica on seedling establishment and growth

Treesearch

Mario B. Pesendorfer

2015-01-01

Quercus pacifica, the island scrub-oak, is the dominant species in oak chaparral on the three largest California Channel Islands. While the population on Santa Cruz Island has experienced a strong recovery, the populations on Santa Rosa and Santa Catalina islands are of conservation concern, and managers are actively restoring oak habitat by...

Shape matters in protein mobility within membranes

PubMed Central

Quemeneur, François; Sigurdsson, Jon K.; Renner, Marianne; Atzberger, Paul J.; Bassereau, Patricia; Lacoste, David

2014-01-01

The lateral mobility of proteins within cell membranes is usually thought to be dependent on their size and modulated by local heterogeneities of the membrane. Experiments using single-particle tracking on reconstituted membranes demonstrate that protein diffusion is significantly influenced by the interplay of membrane curvature, membrane tension, and protein shape. We find that the curvature-coupled voltage-gated potassium channel (KvAP) undergoes a significant increase in protein mobility under tension, whereas the mobility of the curvature-neutral water channel aquaporin 0 (AQP0) is insensitive to it. Such observations are well explained in terms of an effective friction coefficient of the protein induced by the local membrane deformation. PMID:24706877

Factors controlling the size and shape of stream channels in coarse noncohesive sands

USGS Publications Warehouse

Wolman, M. Gordon; Brush, Lucien M.

1961-01-01

The size and shape of equilibrium channels in uniform, noncohesive sands, 0.67 mm and 2.0 mm in diameter, were studied experimentally in a laboratory flume 52 feet long in which discharge, slope, sediment load, and bed and bank material could be varied independently. For each run a straight trapezoidal channel was molded in the sand and the flume set at a predetermined slope. Introduction of the discharge was accompanied by widening and aggradation until a stable channel was established. By definition a stable equilibrium existed when channel width, water surface slope, and rate of transport became constant. The duration of individual runs ranged from 2 to 52 hours depending upon the time required for establishing equilibrium. Stability of the banks determined channel shape. In the 2.0 mm sand at a given slope and discharge, only one depth was stable. At this depth the flow was just competent to move particles along the bed of the channel. An increase in discharge produced a wider channel of the same depth and thus transport per unit width remained at a minimum. Channels in the 0.67 mm sand were somewhat more stable and permitted a 1.5 fold increase in depth above that required to start movement of the bed material. An increased transport was associated with the increase in depth. The rate of transport is adequately described in terms of the total shear or in terms of the difference between the total shear and the critical shear required to begin movement. In these experiments the finer, or 0.67 mm, sand, began to move along the bed of the channel at a constant shear stress. Incipient movement of the coarser, or 2.0 mm, sand, varied with the shear stress as well as the mean velocity. At the initiation of movement a lower shear was associated with a higher velocity and vice versa. Anabranches of braided rivers and some natural river channels formed in relatively noncohesive materials resemble the essential characteristics of the flume channels. For a given slope and size of bed material the discharge per unit width in the laboratory channels was similar to that computed for anabranches and river channels measured in the field. Unlike most natural channels, despite impressive bank erosion, the channels in the laboratory only meandered at supercritical flows associated with very steep slopes. These conditions involving shallow depths, high velocity, and steep slopes are uncommon in most natural rivers.

Thermal induced carrier's transfer in bimodal size distribution InAs/GaAs quantum dots

NASA Astrophysics Data System (ADS)

Ilahi, B.; Alshehri, K.; Madhar, N. A.; Sfaxi, L.; Maaref, H.

2018-06-01

This work reports on the investigation of the thermal induced carriers' transfer mechanism in vertically stacked bimodal size distribution InAs/GaAs quantum dots (QD). A model treating the QD as a localized states ensemble (LSE) has been employed to fit the atypical temperature dependence of the photoluminescence (PL) emission energies and linewidth. The results suggest that thermally activated carriers transfer within the large size QD family occurs through the neighboring smaller size QD as an intermediate channel before direct carriers redistribution. The obtained activation energy suggests also the possible contribution of the wetting layer (WL) continuum states as a second mediator channel for carriers transfer.

Piezo channels and GsMTx4: Two milestones in our understanding of excitatory mechanosensitive channels and their role in pathology.

PubMed

Suchyna, Thomas M

2017-11-01

Discovery of Piezo channels and the reporting of their sensitivity to the inhibitor GsMTx4 were important milestones in the study of non-selective cationic mechanosensitive channels (MSCs) in normal physiology and pathogenesis. GsMTx4 had been used for years to investigate the functional role of cationic MSCs, especially in muscle tissue, but with little understanding of its target or inhibitory mechanism. The sensitivity of Piezo channels to bilayer stress and its robust mechanosensitivity when expressed in heterologous systems were keys to determining GsMTx4's mechanism of action. However, questions remain regarding Piezo's role in muscle function due to the non-selective nature of GsMTx4 inhibition toward membrane mechanoenzymes and the implication of MCS channel types by genetic knockdown. Evidence supporting Piezo like activity, at least in the developmental stages of muscle, is presented. While the MSC targets of GsMTx4 in muscle pathology are unclear, its muscle protective effects are clearly demonstrated in two recent in situ studies on normal cardiomyocytes and dystrophic skeletal muscle. The muscle protective function may be due to the combined effect of GsMTx4's inhibitory action on cationic MSCs like Piezo and TRP, and its potentiation of repolarizing K + selective MSCs like K2P and SAKCa. Paradoxically, the potent in vitro action of GsMTx4 on many physiological functions seems to conflict with its lack of in situ side-effects on normal animal physiology. Future investigations into cytoskeletal control of sarcolemma mechanics and the suspected inclusion of MSCs in membrane micro/nano sized domains with distinct mechanical properties will aide our understanding of this dichotomy. Published by Elsevier Ltd.

Suspended Sediment Character in the Tidal Mekong River: Observations from LISST Profiling

NASA Astrophysics Data System (ADS)

Di Leonardo, D. R.; Allison, M. A.

2016-02-01

In two recent cooperative field campaigns, teams of researchers from the US and Vietnam collected hydrological and sedimentological data during a low flow season and a high flow season on the lower 100 km of the Song Hau distributary of the Mekong River. The objective of this study is to describe the forcing controls (e.g., tidal and riverine flow, water column stratification, resuspension) on suspended sediment grain size (e.g. mass, volume, granulometry, degree of flocculation) as measured by a Sequoia Scientific LISST 100X mounted on a profiling CTD. LISST (Type C, 2.5-500 µm size range) casts were collected at five transects in the Song Hau distributary. Four transects were located in the Dinh An and the Tran De channels immediately above the ocean interface with one additional transect located above the channel bifurcation, 40 km from the river mouth. Casts were collected at multiple stations across each channel transect for 12 hour and 24 hour continuous periods. Stationary ADCP data was collected during each 5-15 minute cast period and used to characterize shear stress. Preliminary results from the LISST suggest that the majority of suspended sediment is in the silt and very fine sand range. Increasing concentrations of all size fractions towards the bed suggests a local sediment source. Bimodal grain size distributions, with the coarser peak in the 150 µm to 250 µm range, are observed frequently, especially in the low discharge study. Grain size frequencies from the high discharge study tend to be more often unimodal. While there was effectively no salinity observed during the October 2014 high flow season, a maximum of 25.8 PSU was observed in the March 2015 low flow season. These results suggest that flocculation is an important process in the Mekong River, particularly during periods of higher salinity.

Investigating selective transport and abrasion on an alluvial fan using quantitative grain size and shape analysis

NASA Astrophysics Data System (ADS)

Litwin, K. L.; Jerolmack, D. J.

2011-12-01

Selective sorting and abrasion are the two major fluvial processes that are attributed to the downstream fining of sediments in rivers and alluvial fans. Selective transport is the process by which smaller grains are preferentially transported downstream while larger grains are deposited closer to the source. Abrasion is defined by the production of fine sediments and sand that occurs by saltation of gravel, where particle-to-particle collisions supply the energy required to break apart grains. We hypothesize that abrasion results in the gradual fining of large grains and the production of fine sands and silts, while sorting accounts for the differences in transport of these two grain-size fractions produced from abrasion, thereby creating the abrupt gravel-sand transition observed in many channel systems. In this research, we explore both selective transport and abrasion processes on the Dog Canyon alluvial fan near Alamogordo, New Mexico. We complete an extensive grain size analysis down the main channel of the fan employing an image-based technique that utilizes an autocorrelation process. We also characterize changes in grain shape using standard shape parameters, as well as Fourier analysis, which allows the study of contributions of grain roughness on a variety of length scales. Sorting appears to dominate the upper portion of the fan; the grain-size distribution narrows moving downstream until reaching a point of equal mobility, at which point sorting ceases. Abrasion exerts a subtle but persistent effect on grains during transport down the fan. Shape analysis reveals that particles become more rounded by the removal of small-scale textural features, a process that is expected to only modestly influence grain size of gravel, but should produce significant quantities of sand. This study provides a better understanding of the importance of grain abrasion and sorting on the downstream fining of channel grains in an alluvial fan, as well as an improved knowledge about the abrupt gravel-sand transition observed in a majority of alluvial fans.

SU-E-I-46: Sample-Size Dependence of Model Observers for Estimating Low-Contrast Detection Performance From CT Images

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reiser, I; Lu, Z

2014-06-01

Purpose: Recently, task-based assessment of diagnostic CT systems has attracted much attention. Detection task performance can be estimated using human observers, or mathematical observer models. While most models are well established, considerable bias can be introduced when performance is estimated from a limited number of image samples. Thus, the purpose of this work was to assess the effect of sample size on bias and uncertainty of two channelized Hotelling observers and a template-matching observer. Methods: The image data used for this study consisted of 100 signal-present and 100 signal-absent regions-of-interest, which were extracted from CT slices. The experimental conditions includedmore » two signal sizes and five different x-ray beam current settings (mAs). Human observer performance for these images was determined in 2-alternative forced choice experiments. These data were provided by the Mayo clinic in Rochester, MN. Detection performance was estimated from three observer models, including channelized Hotelling observers (CHO) with Gabor or Laguerre-Gauss (LG) channels, and a template-matching observer (TM). Different sample sizes were generated by randomly selecting a subset of image pairs, (N=20,40,60,80). Observer performance was quantified as proportion of correct responses (PC). Bias was quantified as the relative difference of PC for 20 and 80 image pairs. Results: For n=100, all observer models predicted human performance across mAs and signal sizes. Bias was 23% for CHO (Gabor), 7% for CHO (LG), and 3% for TM. The relative standard deviation, σ(PC)/PC at N=20 was highest for the TM observer (11%) and lowest for the CHO (Gabor) observer (5%). Conclusion: In order to make image quality assessment feasible in the clinical practice, a statistically efficient observer model, that can predict performance from few samples, is needed. Our results identified two observer models that may be suited for this task.« less

Self-Assembling Organic Nanopores as Synthetic Transmembrane Channels with Tunable Functions

NASA Astrophysics Data System (ADS)

Wei, Xiaoxi

A long-standing goal in the area of supramolecular self-assembly involves the development of synthetic ion/water channels capable of mimicking the mass-transport characteristics of biological channels and pores. Few examples of artificial transmembrane channels with large lumen, high conductivity and selectivity are known. A review of pronounced biological transmembrane protein channels and some representative synthetic models have been provided in Chapter 1, followed by our discovery and initial investigation of shape-persistent oligoamide and phenylene ethynylene macrocycles as synthetic ion/water channels. In Chapter 2, the systematic structural modification of oligoamide macrocycles 1, the so-called first-generation of these shape-persistent macrocycles, has led to third-generation macrocycles 3. The third generation was found to exhibit unprecedented, strong intermolecular association in both the solid state and solution via multiple techniques including X-ray diffraction (XRD), SEM, and 1H NMR. Fluorescence spectroscopy paired with dynamic light scattering (DLS) revealed that macrocycles 3 can assemble into a singly dispersed nanotubular structure in solution. The resultant self-assembling pores consisting of 3 were examined by HPTS-LUVs assays and BLM studies (Chapter 3) and found to form cation-selective (PK+/PCl- = 69:1) transmembrane ion channels with large conductance (200 ˜ 2000 pS for alkali cations) and high stability with open times reaching to 103 seconds. Tuning the aggregation state of macrocycles by choosing an appropriate polar solvent mixture (i.e., 3:1, THF:DMF, v/v) and concentration led to the formation of ion channels with well-defined square top behavior. A parallel study using DLS to examine the size of aggregates was used in conjunction with channel activity assays (LUVs/BLM) to reveal the effects of the aggregation state on channel activity. Empirical evidence now clearly indicates that a preassembled state, perhaps that of a nanotubular assembly, rather than the individual molecules of 3, is required to partition into the lipid bilayer in order for these macrocycles to act as channels. Further structural modification has led to fourth-generation macrocycles 4 having readily-tunable cavities (Chapter 4). Macrocycles 4 , with a hybrid backbone composed half of the oligoamide and half of the phenylene ethynylene moieties, exhibits similar self-assembling behavior by forming nanotubular stacks. The results of a preliminary study based on LUVs-assays and BLM single channel recording experiments are summarized and clearly indicate that ion channels formed by this fourth-generation exhibit high stability and differing ion selectivity largely consistent with the corresponding structural modification of the interior cavity. Especially, the increased anion conductance observed for 4d indicates that our strategy of tuning supramolecular function based on synthetic modification of the backbone and pore is effective. In Chapter 5, our four-residue tetraurea macrocycles 5 have shown significant potency to selectively interact with the G-quadruplex, leading to a strong stabilization effect for G-quadruplex without binding to duplex DNA as observed by UV-melt assays. The ready synthetic availability of these macrocycles makes them amenable to future chemical modification, which allows systematic improvement of binding affinity and specificity. Moreover, it has been discovered that these macrocycles can partition into lipid bilayers and form very stable transmembrane ion channels with a pore size of ˜5 A. Preliminary data shows that this smaller ion channel may lead to exceptional ion conducting selectivity, which is rarely seen in the field of synthetic ion pores. These molecules may serve as a unique platform for the rational development of potent and versatile therapeutic agents. The exceptional ion conducting properties of these channels place aromatic oligoamide macrocycles 3 and 4 at a unique position with both high conductance and long channel-opening duration. These results demonstrate that oligoamide macrocycles provide us a reliable platform based on which further development of highly conducting and selective synthetic mass-transporting channels, with functions that are comparable to or even rival those of natural channels and pores, may be developed. Further improvement of these synthetic channels could lead to numerous applications, such as those for complementing ion channel deficiency in clinical medicine, designing biosensors, and the development of new materials, as well as their use in separation and purifications.

Response of a channel with alternate bars to a decrease in supple of mixed-size bedload: A flume experiment

Treesearch

Thomas E. Lisle; Fujiko Iseya; Hiroshi Ikeda

1993-01-01

The response of a channel with a topography and modeled bed material size typical of gravel bed rivers to reductions in sediment supply was investigated in a laboratory flume filled and fed with a sand-gravel mixture. After a series of quasi-stationary alternate bars were formed under equilibrium sediment transport, feed rate was reduced in two steps to one third and...

Changes in cortical bone channels network and osteocyte organization after the use of zoledronic acid.

PubMed

Rabelo, Gustavo Davi; Travençolo, Bruno Augusto Nassif; Oliveira, Marcio Augusto; Beletti, Marcelo Emílio; Gallottini, Marina; Silveira, Fernando Ricardo Xavier da

2015-12-01

The aim of this study was to evaluate the effects of zoledronic acid (ZA) on the cortical bone channels network (CBCN) and osteocyte organization in relation to the bone channels. Eighteen male Wistar rats were divided into control (CG) and test groups (TG). Twelve animals from TG received 3 ZA doses (7.5 µg/kg), and 6 animals from CG did not receive any medication. TG animals were euthanized at 14 (n = 6) and 75 (n = 6) dadys after drug injection. CBCN was analyzed in mandibles and tibias using computational routines. The osteocyte organization was qualitatively evaluated in tibias using a three-dimensional reconstruction of images from serial histological sections. Significant differences in CBCN of tibia were found between the treated and untreated rats, with a wider range of sizes and shapes of the channels after the use of ZA (channels area p = 0.0063, channels area SD p = 0.0276) and less bone matrix (bone volume p = 0.0388). The alterations in the channels' morphology were more evident at 75 days after the drug injection (channels perimeter p = 0.0286). No differences were found in mandibles CBCN. The osteocyte distribution revealed more variable patterns of cell distribution in ZA groups, with non-homogeneous distribution of cells in relation to the bone channels. Zoledronic acid induces structural changes in CBCN and modifies the osteocyte arrangement in cortical bone in the tibia; also, the variability in the morphology of bone channels became more evident after a certain time of the use of the drug.

Chronic Hypoxia Suppresses Pregnancy-Induced Upregulation of Large-Conductance Ca2+-Activated K+ Channel Activity in Uterine Arteries

PubMed Central

Hu, Xiang-Qun; Xiao, Daliao; Zhu, Ronghui; Huang, Xiaohui; Yang, Shumei; Wilson, Sean M.; Zhang, Lubo

2013-01-01

Our previous study demonstrated that increased Ca2+-activated K+ (BKCa) channel activity played a key role in the normal adaptation of reduced myogenic tone of uterine arteries in pregnancy. The present study tested the hypothesis that chronic hypoxia during gestation inhibits pregnancy-induced upregulation of BKCa channel function in uterine arteries. Resistance-sized uterine arteries were isolated from nonpregnant and near-term pregnant sheep maintained at sea level (≈300 m) or exposed to high-altitude (3801 m) hypoxia for 110 days. Hypoxia during gestation significantly inhibited pregnancy-induced upregulation of BKCa channel activity and suppressed BKCa channel current density in pregnant uterine arteries. This was mediated by a selective downregulation of BKCa channel β1 subunit in the uterine arteries. In accordance, hypoxia abrogated the role of the BKCa channel in regulating pressure-induced myogenic tone of uterine arteries that was significantly elevated in pregnant animals acclimatized to chronic hypoxia. In addition, hypoxia abolished the steroid hormone-mediated increase in the β1 subunit and BKCa channel current density observed in nonpregnant uterine arteries. Although the activation of protein kinase C inhibited BKCa channel current density in pregnant uterine arteries of normoxic sheep, this effect was ablated in the hypoxic animals. The results demonstrate that selectively targeting BKCa channel β1 subunit plays a critical role in the maladaption of uteroplacental circulation caused by chronic hypoxia, which contributes to the increased incidence of preeclampsia and fetal intrauterine growth restriction associated with gestational hypoxia. PMID:22665123

Effect of palladium doping on the stability and fragmentation patterns of cationic gold clusters

NASA Astrophysics Data System (ADS)

Ferrari, P.; Hussein, H. A.; Heard, C. J.; Vanbuel, J.; Johnston, R. L.; Lievens, P.; Janssens, E.

2018-05-01

We analyze in detail how the interplay between electronic structure and cluster geometry determines the stability and the fragmentation channels of single Pd-doped cationic Au clusters, PdA uN-1+ (N =2 -20 ). For this purpose, a combination of photofragmentation experiments and density functional theory calculations was employed. A remarkable agreement between the experiment and the calculations is obtained. Pd doping is found to modify the structure of the Au clusters, in particular altering the two-dimensional to three-dimensional transition size, with direct consequences on the stability of the clusters. Analysis of the electronic density of states of the clusters shows that depending on cluster size, Pd delocalizes one 4 d electron, giving an enhanced stability to PdA u6 + , or remains with all 4 d10 electrons localized, closing an electronic shell in PdA u9 + . Furthermore, it is observed that for most clusters, Au evaporation is the lowest-energy decay channel, although for some sizes Pd evaporation competes. In particular, PdA u7 + and PdA u9 + decay by Pd evaporation due to the high stability of the A u7 + and A u9 + fragmentation products.

Dissolved Nutrient Retention Dynamics in River Networks: A Modeling Investigation of Transient Flow and Scale Effects

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ye, Sheng; Covino, Timothy P.; Sivapalan, Murugesu

In this paper, we use a dynamic network flow model, coupled with a transient storage zone biogeochemical model, to simulate dissolved nutrient removal processes at the channel network scale. We have explored several scenarios in respect of the combination of rainfall variability, and the biological and geomorphic characteristics of the catchment, to understand the dominant controls on removal and delivery of dissolved nutrients (e.g., nitrate). These model-based theoretical analyses suggested that while nutrient removal efficiency is lower during flood events compared to during baseflow periods, flood events contribute significantly to bulk nutrient removal, whereas bulk removal during baseflow periods ismore » less. This is due to the fact that nutrient supply is larger during flood events; this trend is even stronger in large rivers. However, the efficiency of removal during both periods decreases in larger rivers, however, due to (i) increasing flow velocities and thus decreasing residence time, and (ii) increasing flow depth, and thus decreasing nutrient uptake rates. Besides nutrient removal processes can be divided into two parts: in the main channel and in the hyporheic transient storage zone. When assessing their relative contributions the size of the transient storage zone is a dominant control, followed by uptake rates in the main channel and in the transient storage zone. Increasing size of the transient storage zone with downstream distance affects the relative contributions to nutrient removal of the water column and the transient storage zone, which also impacts the way nutrient removal rates scale with increasing size of rivers. Intra-annual hydrologic variability has a significant impact on removal rates at all scales: the more variable the streamflow is, compared to mean discharge, the less nutrient is removed in the channel network. A scale-independent first order uptake coefficient, ke, estimated from model simulations, is highly dependent on the relative size of the transient storage zone and how it changes in the downstream direction, as well as the nature of hydrologic variability.« less

Sand Waves in Tidal Channels

DTIC Science & Technology

2007-01-01

sincerely thank Steven Borgeld, from Humboldt State University, for providing the grain size data for the Humboldt Entrance Channel. iv SAND...Wave Characteristics at Moriches Inlet... 182 APPENDIX VII – Sediment Data , Humboldt Entrance Channel, CA ........................... 186 References...waves may be limited by wave action, sand supply, and dredging activity. Bathymetric data collected at Humboldt Inlet, California, show sand waves

Overview: Channel morphology and sediment transport in steepland streams

Treesearch

T. E. Lisle

1987-01-01

Abstract - New understanding of how steepland channels formed is being pursued over a large range of scales, from entrainment of bed particles to the transfer of stored sediment down channel systems. Low submergence of bed particles during transport and wide heterogeneity in particle sizes strongly affect bedload transport. At the scale of a reach, scour-lobes are...

Patterns and controls on historical channel change in the Willamette River, Oregon, USA

Treesearch

Jennifer Rose Wallick; Gordon E. Grant; Stephen T. Lancaster; John P. Bolte; Roger P. Denlinger

2007-01-01

Distinguishing human impacts on channel morphology from the natural behaviour of fluvial systems is problematic for large river basins. Large river basins, by virtue of their size, typically encompass wide ranges of geology and landforms resulting in diverse controls on channel form. They also inevitably incorporate long and complex histories of overlapping human and...

The importance of dehydration in determining ion transport in narrow pores.

PubMed

Richards, Laura A; Schäfer, Andrea I; Richards, Bryce S; Corry, Ben

2012-06-11

The transport of hydrated ions through narrow pores is important for a number of processes such as the desalination and filtration of water and the conductance of ions through biological channels. Here, molecular dynamics simulations are used to systematically examine the transport of anionic drinking water contaminants (fluoride, chloride, nitrate, and nitrite) through pores ranging in effective radius from 2.8 to 6.5 Å to elucidate the role of hydration in excluding these species during nanofiltration. Bulk hydration properties (hydrated size and coordination number) are determined for comparison with the situations inside the pores. Free energy profiles for ion transport through the pores show energy barriers depend on pore size, ion type, and membrane surface charge and that the selectivity sequence can change depending on the pore size. Ion coordination numbers along the trajectory showed that partial dehydration of the transported ion is the main contribution to the energy barriers. Ion transport is greatly hindered when the effective pore radius is smaller than the hydrated radius, as the ion has to lose some associated water molecules to enter the pore. Small energy barriers are still observed when pore sizes are larger than the hydrated radius due to re-orientation of the hydration shell or the loss of more distant water. These results demonstrate the importance of ion dehydration in transport through narrow pores, which increases the current level of mechanistic understanding of membrane-based desalination and transport in biological channels. Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

An Adaptive Source-Channel Coding with Feedback for Progressive Transmission of Medical Images

PubMed Central

Lo, Jen-Lung; Sanei, Saeid; Nazarpour, Kianoush

2009-01-01

A novel adaptive source-channel coding with feedback for progressive transmission of medical images is proposed here. In the source coding part, the transmission starts from the region of interest (RoI). The parity length in the channel code varies with respect to both the proximity of the image subblock to the RoI and the channel noise, which is iteratively estimated in the receiver. The overall transmitted data can be controlled by the user (clinician). In the case of medical data transmission, it is vital to keep the distortion level under control as in most of the cases certain clinically important regions have to be transmitted without any visible error. The proposed system significantly reduces the transmission time and error. Moreover, the system is very user friendly since the selection of the RoI, its size, overall code rate, and a number of test features such as noise level can be set by the users in both ends. A MATLAB-based TCP/IP connection has been established to demonstrate the proposed interactive and adaptive progressive transmission system. The proposed system is simulated for both binary symmetric channel (BSC) and Rayleigh channel. The experimental results verify the effectiveness of the design. PMID:19190770

Visualization of hydraulic conditions inside the feed channel of Reverse Osmosis: A practical comparison of velocity between empty and spacer-filled channel.

PubMed

Haidari, A H; Heijman, S G J; van der Meer, W G J

2016-12-01

It is widely accepted that our understanding about the membrane process increases by investigation of the hydraulic conditions of membranes. While numerical studies have been broadly used for this purpose, the experimental studies of a comparable resolution are scarce. In this study, we compared the pressure drop, the temporal and the spatial velocity maps of a spacer-filled channel and an empty channel of the same size to determine the effect of presence of the feeds spacer on hydraulic conditions. The velocity maps are obtained experimentally by using of the Particle Image Velocimetry (PIV) technique. Application of the feed spacer caused 2-8.5 higher pressure drop increase in the experimental conditions in this research. The flow had a spatial distribution in the form of a unimodal symmetric curve of normal distribution in the empty channel and a bimodal asymmetric curve in the spacer-filled channel. The bimodal curve indicates the presence of high- and low-velocity zones. Additionally, the low-velocity zones showed also a lower variation of velocity in time, which indicates the high fouling potential of these locations. The results from this study may be uses for validation of numerical studies. Copyright © 2016 Elsevier Ltd. All rights reserved.

Cardioselective K(ATP) channel blockers derived from a new series of m-anisamidoethylbenzenesulfonylthioureas.

PubMed

Englert, H C; Gerlach, U; Goegelein, H; Hartung, J; Heitsch, H; Mania, D; Scheidler, S

2001-03-29

Sulfonylthioureas exhibiting cardioselective blockade of ATP-sensitive potassium channels (K(ATP) channels) were discovered by stepwise structural variations of the antidiabetic sulfonylurea glibenclamide. As screening assays, reversal of rilmakalim-induced shortening of the cardiac action potential in guinea pig papillary muscles was used to probe for activity on cardiac K(ATP) channels as the target, and membrane depolarization in CHO cells stably transfected with hSUR1/hKir6.2 was used to probe for unwanted side effects on pancreatic K(ATP) channels. Changing glibenclamide's para-arrangement of substituents in the central aromatic ring to a meta-pattern associated with size reduction of the substituent at the terminal nitrogen atom of the sulfonylurea moiety was found to achieve cardioselectivity. An additional change from a sulfonylurea moiety to a sulfonylthiourea moiety along with an appropriate substituent in the ortho-position of the central aromatic system was a successful strategy to further improve potency on the cardiac K(ATP) channel. Among this series of sulfonylthioureas HMR1883, 1-[5-[2-(5-chloro-o-anisamido)ethyl]-2-methoxyphenyl]sulfonyl-3-methylthiourea, and its sodium salt HMR1098 were selected for development and represent a completely new therapeutic approach toward the prevention of life-threatening arrhythmias and sudden cardiac death in patients with coronary heart disease.

Beach-cusp formation

USGS Publications Warehouse

Sallenger, A.H.

1979-01-01

Field experiments on beach-cusp formation were undertaken to document how the cuspate form develops and to test the edge-wave hypothesis on the uniform spacing of cusps. These involved observations of cusps forming from an initially plane foreshore. The cuspate form was observed to be a product of swash modification of an intertidal beach ridge as follows. A ridge, cut by a series of channels quasi-equally spaced along its length, was deposited onto the lower foreshore. The ridge migrated shoreward with flood tide, while the longshore positions of the channels remained fixed. On ebb tide, changes in swash circulation over the ridge allowed the upwash to flow shoreward through the channels and the channel mouths were eroded progressively wider until adjacent mouths met, effecting a cuspate shape. Measured spacings of cusps, ranging in size from less than 1 m to more than 12 m, agree well with computed spacings due to either zero-mode subharmonic or zero-mode synchronous edge waves. Edge-wave-induced longshore variations in run up will cause water ponded behind a ridge to converge at points of low swash and flow seaward as relatively narrow currents eroding channels spaced at one edge-wave wavelength for synchronous edge waves or one half wavelength for subharmonic edge waves. The channels are subsequently modified into cusp troughs as described above.

Phase segregation in multiphase turbulent channel flow

NASA Astrophysics Data System (ADS)

Bianco, Federico; Soldati, Alfredo

2014-11-01

The phase segregation of a rapidly quenched mixture (namely spinodal decomposition) is numerically investigated. A phase field approach is considered. Direct numerical simulation of the coupled Navier-Stokes and Cahn-Hilliard equations is performed with spectral accuracy and focus has been put on domain growth scaling laws, in a wide range of regimes. The numerical method has been first validated against well known results of literature, then spinodal decomposition in a turbulent bounded flow (channel flow) has been considered. As for homogeneous isotropic case, turbulent fluctuations suppress the segregation process when surface tension at the interfaces is relatively low (namely low Weber number regimes). For these regimes, segregated domains size reaches a statistically steady state due to mixing and break-up phenomena. In contrast with homogenous and isotropic turbulence, the presence of mean shear, leads to a typical domain size that show a wall-distance dependence. Finally, preliminary results on the effects to the drag forces at the wall, due to phase segregation, have been discussed. Regione FVG, program PAR-FSC.

Modeling Pressure-Driven Transport of Proteins through a Nanochannel

PubMed Central

Carr, Rogan; Comer, Jeffrey; Ginsberg, Mark D.; Aksimentiev, Aleksei

2012-01-01

Reducing the size of a nanofluidic channel not only creates new opportunities for high-precision manipulation of biological macromolecules, but also makes the performance of the entire nanofluidic system more susceptible to undesirable interactions between the transported biomolecules and the walls of the channel. In this manuscript, we report molecular dynamics simulations of a pressure-driven flow through a silica nanochannel that characterized, with atomic resolution, adsorption of a model protein to its surface. Although the simulated adsorption of the proteins was found to be nonspecific, it had a dramatic effect on the rate of the protein transport. To determine the relative strength of the protein–silica interactions in different adsorbed states, we simulated flow-induced desorption of the proteins from the silica surface. Our analysis of the protein conformations in the adsorbed states did not reveal any simple dependence of the adsorption strength on the size and composition of the protein–silica contact, suggesting that the heterogeneity of the silica surface may be a important factor. PMID:22611338

Optimization of the performance of a tandem microchannel plate detector as a function of interplate spacing and voltage

NASA Technical Reports Server (NTRS)

Rogers, D.; Malina, R. F.

1982-01-01

The effect of varying the size of the gap voltage and spacing on the performance of a tandem pair of microchannel plates (MCP) is investigated. Results show that increasing the voltage in the gap increases the gain of the pair and also produces a narrower Gaussian pulse-height distribution, although beyond a critical voltage the gain of the channel plate pair is found to plateau. A model is developed which explains the nonlinear gain behavior of individual microchannels and the behavior of the electron cloud emitted from the first MCP as it spreads out between the two MCPs and hits the surface of the second. The model calculates the plateau voltage as a function of the gap size, the gain of each MCP, and the diameter of the channels, and is found to show good agreement with the observed results. It is concluded that interplate gaps of up to several millimeters can be accommodated without a significant degradation in pulse-height distribution.

Buffer regulation of calcium puff sequences.

PubMed

Fraiman, Daniel; Dawson, Silvina Ponce

2014-02-01

Puffs are localized Ca(2 +) signals that arise in oocytes in response to inositol 1,4,5-trisphosphate (IP3). They are the result of the liberation of Ca(2 +) from the endoplasmic reticulum through the coordinated opening of IP3 receptor/channels clustered at a functional release site. The presence of buffers that trap Ca(2 +) provides a mechanism that enriches the spatio-temporal dynamics of cytosolic calcium. The expression of different types of buffers along the cell's life provides a tool with which Ca(2 +) signals and their responses can be modulated. In this paper we extend the stochastic model of a cluster of IP3R-Ca(2 +) channels introduced previously to elucidate the effect of buffers on sequences of puffs at the same release site. We obtain analytically the probability laws of the interpuff time and of the number of channels that participate of the puffs. Furthermore, we show that under typical experimental conditions the effect of buffers can be accounted for in terms of a simple inhibiting function. Hence, by exploring different inhibiting functions we are able to study the effect of a variety of buffers on the puff size and interpuff time distributions. We find the somewhat counter-intuitive result that the addition of a fast Ca(2 +) buffer can increase the average number of channels that participate of a puff.

Clinical Trial of the Potassium Channel Activator Diazoxide for Major Depressive Disorder Halted Due to Intolerability.

PubMed

Kadriu, Bashkim; Yuan, Shiwen; Farmer, Cristan; Nugent, Allison C; Lener, Marc S; Niciu, Mark J; Park, Minkyung; Yazdian, Aaron; Ballard, Elizabeth D; Henn, Fritz A; Henter, Ioline D; Park, Lawrence T; Zarate, Carlos A

2018-06-01

Some glutamatergic modulators have demonstrated rapid and relatively sustained antidepressant properties in patients with major depressive disorder. Because the potassium channel activator diazoxide increases glutamate uptake via potassium channel activation, we hypothesized that it might exert antidepressant effects by increasing the removal of glutamate from the synaptic cleft, thereby reducing excessive glutamate transmission. This randomized, double-blind, placebo-controlled, crossover, single-site inpatient clinical study was conducted at the National Institute of Mental Health to assess the efficacy and safety of a 3-week course of diazoxide (200-400 mg daily, twice a day) versus a 3-week course of placebo in 6 participants with treatment-refractory major depressive disorder. The primary clinical outcome measure was change in Montgomery-Asberg Depression Rating Scale score from baseline to posttreatment. Quantitative insulin sensitivity check index, as well as concomitant imaging measures (electroencephalography, proton magnetic resonance spectroscopy, magnetoencephalography), were used as potential surrogate markers of target (KATP channel) engagement. The study was halted due to severe adverse effects. Given the small sample size, statistical evaluation of the effect of diazoxide on Montgomery-Asberg Depression Rating Scale scores or the imaging measures was not pursued. Visual inspection of the quantitative insulin sensitivity check index test revealed no evidence of target engagement. Although the results are negative, they are an important addition to the literature in this rapidly changing field.

Buffer regulation of calcium puff sequences

NASA Astrophysics Data System (ADS)

Fraiman, Daniel; Ponce Dawson, Silvina

2014-02-01

Puffs are localized Ca2 + signals that arise in oocytes in response to inositol 1,4,5-trisphosphate (IP3). They are the result of the liberation of Ca2 + from the endoplasmic reticulum through the coordinated opening of IP3 receptor/channels clustered at a functional release site. The presence of buffers that trap Ca2 + provides a mechanism that enriches the spatio-temporal dynamics of cytosolic calcium. The expression of different types of buffers along the cell's life provides a tool with which Ca2 + signals and their responses can be modulated. In this paper we extend the stochastic model of a cluster of IP3R-Ca2 + channels introduced previously to elucidate the effect of buffers on sequences of puffs at the same release site. We obtain analytically the probability laws of the interpuff time and of the number of channels that participate of the puffs. Furthermore, we show that under typical experimental conditions the effect of buffers can be accounted for in terms of a simple inhibiting function. Hence, by exploring different inhibiting functions we are able to study the effect of a variety of buffers on the puff size and interpuff time distributions. We find the somewhat counter-intuitive result that the addition of a fast Ca2 + buffer can increase the average number of channels that participate of a puff.

Geomorphic Framework to assess changes to aquatic habitat due to flow regulation and channel and floodplain alteration, Cedar River, Washington

USGS Publications Warehouse

Gendaszek, Andrew S.; Magirl, Christopher S.; Czuba, Christiana R.; Konrad, Christopher P.; Little, Rand

2010-01-01

Flow regulation, bank armoring, and floodplain alteration since the early 20th century have contributed to significant changes in the hydrologic regime and geomorphic processes of the Cedar River in Washington State. The Cedar River originates in the Cascade Range, provides drinking water to the Seattle metropolitan area, and supports several populations of anadromous salmonids. Flow regulation currently has limited influence on the magnitude, duration, and timing of high-flow events, which affect the incubation of salmonids as well as the production and maintenance of their habitat. Unlike structural changes to the channel and floodplain, flow regulation may be modified in the short-term to improve the viability of salmon populations. An understanding of the effects of flow regulation on those populations must be discerned over a range of scales from individual floods that affect the size of individual year classes to decadal high flow regime that influences the amount and quality of channel and off-channel habitat available for spawning and rearing. We present estimates of reach-scale sediment budgets and changes to channel morphology derived from historical orthoimagery, specific gage analyses at four long-term streamflow-gaging stations to quantify trends in aggradation, and hydrologic statistics of the magnitude and duration of peak streamflows. These data suggest a gradient of channel types from unconfined, sediment-rich segments to confined, sediment-poor segments that are likely to have distinct responses to high flows. Particle-size distribution data and longitudinal water surface and streambed profiles for the 56 km downstream of Chester Morse Lake measured in 2010 show the spatial extent of preferred salmonid habitat along the Cedar River. These historical and current data constitute a geomorphic framework to help assess different river management scenarios for salmonid habitat and population viability. PDF version of a presentation on changes to aquatic habitat at the Cedar River in Washington state. Presented at the American Geophysical Union Fall Meeting 2010.

Impacts of variable channel hydraulics on the stratigraphic record: an example provided from the Tullig Sandstone, Western Irish Namurian Basin

NASA Astrophysics Data System (ADS)

Wu, C.; Nittrouer, J. A.; Burmeister, K. C.

2017-12-01

River hydrodynamic conditions are modified where a system approaches its terminal basin, characterized by the onset of non-uniform "backwater" flow. A decrease in boundary shear stress in the backwater region reduces transport capacity and results in sediment deposition on the channel bed. Although such morphodynamic conditions are common in modern fluvial-deltaic channels, the extent to which these processes are prevalent in the stratigraphic record remains unclear. For example, a few studies documenting changes in fluvial sandstone channel dimensions and grain size distributions near a river terminus attributed this variability to backwater hydrodynamics. However, quantitative tests using morphodynamic models bolstered by a variety of field observations, which could then be linked to sediment depositional patterns and stratigraphy, have yet to be produced. Here we calibrate a one-dimensional river flow model with measurements of paleo-slope and channel depth, and use the output to constrain a sediment transport model, with data from the Tullig Sandstone in the Western Irish Namurian Basin. Based on the model results, our analyses indicate that: (1) backwater hydrodynamics influence the spatial variation of sandstone dimensions and grain size across the delta, and (2) backwater hydrodynamics drive channel bed aggradation and progradation of the river mouth for conditions of constant sea level. Field data indicate that the reach-average story thickness increases, and then decreases, progressing downstream over the backwater reach. Based on the inferred transport and depositional processes, the measured deltaic stratigraphy patterns shown here are assumed to be associated with backwater hydrodynamics, and are therefore largely autogenic in origin. These analyses indicate that non-uniform hydrodynamics can generate stratigraphic patterns that could be conflated as arising due to allogenic effects, based on traditional geometric or diffusion-based depositional models. Moreover, the signals of river hydrodynamics preserved in the stratigraphic record can be a useful tool for differentiating between short-term autogenic and long-term allogenic processes.

Electrophoresis in ice surface grooves for probing protein affinity to a specific plane of ice crystal.

PubMed

Inagawa, Arinori; Okada, Yusuke; Okada, Tetsuo

2018-06-01

Channel-like grooves are formed on the surface of frozen aqueous sucrose. They are filled with a freeze concentrated solution (FCS) and act as an efficient size-tunable separation field for micro and nanoparticles. The width of the channel can be easily varied by changing the temperature. Because the channel width decreases with decreasing temperature, particles become immobilized due to physical interference from the ice wall when the temperature reaches a threshold point specific to the particle size. Surface modification of particles can add a factor of chemical interaction between the particles and ice walls. In this study, anti-freeze proteins (AFPs) are anchored on 1µm-polystyrene (PS) particles, and their behavior in the surface grooves on the ice is studied. The threshold temperature is an effective criterion for evaluating chemical interactions between particles and ice walls. The AFP binding on 1µm PS particles lowers the threshold temperature by 2.5°C, indicating interactions between AFPs on the PS particles and the ice wall. Because the AFPs studied here show selectivity towards the prism plane, it is critical that the prism plane of the ice crystal is in contact with the FCS in the surface grooves. Copyright © 2017 Elsevier B.V. All rights reserved.

TRPC Channel Structure and Properties.

PubMed

Feng, Shengjie

2017-01-01

TRPC channels are the first identified members in the TRP family. They function as either homo- or heterotetramers regulating intracellular Ca 2+ concentration in response to numerous physiological or pathological stimuli. TRPC channels are nonselective cation channels permeable to Ca 2+ . The properties and the functional domains of TRPC channels have been identified by electrophysiological and biochemical methods. However, due to the large size, instability, and flexibility of their complexes, the structures of the members in TRPC family remain unrevealed. More efforts should be made on structure analysis and generating good tools, including specific antibodies, agonist, and antagonist.

Passive injection control for microfluidic systems

DOEpatents

Paul, Phillip H.; Arnold, Don W.; Neyer, David W.

2004-12-21

Apparatus for eliminating siphoning, "dead" regions, and fluid concentration gradients in microscale analytical devices. In its most basic embodiment, the present invention affords passive injection control for both electric field-driven and pressure-driven systems by providing additional fluid flow channels or auxiliary channels disposed on either side of a sample separation column. The auxiliary channels are sized such that volumetric fluid flow rate through these channels, while sufficient to move the sample away from the sample injection region in a timely fashion, is less than that through the sample separation channel or chromatograph.

Ground beetle communities in a mountain river subjected to restoration: The Raba River, Polish Carpathians.

PubMed

Bednarska, Agnieszka J; Wyżga, Bartłomiej; Mikuś, Paweł; Kędzior, Renata

2018-01-01

Effects of passive restoration of mountain rivers on the organisms inhabiting exposed riverine sediments are considerably less understood than those concerning aquatic biota. Thus, the effects of a recovery of the Raba River after abandonment of maintenance of its channelization scheme on ground beetle (Coleoptera: Carabidae) communities were investigated by comparing 6 unmanaged cross-sections and 6 cross-sections from adjacent channelized reaches. In each cross-section, ground beetles were collected from 12 sampling sites in spring, summer, and autumn, and 8 habitat parameters characterizing the cross-sections and sampling sites were determined. Within a few years after abandonment of the Raba River channelization scheme, the width of this gravel-bed river increased up to three times and its multi-thread pattern became re-established. Consequently, unmanaged river cross-sections had significantly larger channel width and more low-flow channels and eroding cutbanks than channelized cross-sections. Moreover, sampling sites in the unmanaged cross-sections were typified by significantly steeper average surface slope and larger average distance from low-flow channels than the sites in channelized cross-sections. In total, 3992 individuals from 78 taxa were collected during the study. The ground beetle assemblages were significantly more abundant and richer in species in the unmanaged than in the channelized cross-sections but no significant differences in carabid diversity indices between the two cross-section types were recorded. Redundancy Analysis indicated active river zone width as the only variable explaining differences in abundance and species richness among the cross-sections. Multiple regression analysis indicated species diversity to predominantly depend on the degree of plant cover and substrate grain size. The study showed that increased availability of exposed sediments in the widened river reaches allowed ground beetles to increase their abundance and species richness within a few years after the onset of river restoration, but more time may be needed for development of more diverse carabid communities. Copyright © 2017 Elsevier B.V. All rights reserved.

A communication channel model of the software process

NASA Technical Reports Server (NTRS)

Tausworthe, R. C.

1988-01-01

Reported here is beginning research into a noisy communication channel analogy of software development process productivity, in order to establish quantifiable behavior and theoretical bounds. The analogy leads to a fundamental mathematical relationship between human productivity and the amount of information supplied by the developers, the capacity of the human channel for processing and transmitting information, the software product yield (object size), the work effort, requirements efficiency, tool and process efficiency, and programming environment advantage. Also derived is an upper bound to productivity that shows that software reuse is the only means than can lead to unbounded productivity growth; practical considerations of size and cost of reusable components may reduce this to a finite bound.

A communication channel model of the software process

NASA Technical Reports Server (NTRS)

Tausworthe, Robert C.

1988-01-01

Beginning research into a noisy communication channel analogy of software development process productivity, in order to establish quantifiable behavior and theoretical bounds is discussed. The analogy leads to a fundamental mathematical relationship between human productivity and the amount of information supplied by the developers, the capacity of the human channel for processing and transmitting information, the software product yield (object size) the work effort, requirements efficiency, tool and process efficiency, and programming environment advantage. An upper bound to productivity is derived that shows that software reuse is the only means that can lead to unbounded productivity growth; practical considerations of size and cost of reusable components may reduce this to a finite bound.

Size Dependent Cation Channel in Nanoporous Prussian Blue Lattice

NASA Astrophysics Data System (ADS)

Moritomo, Yutaka; Igarashi, Kazuhiro; Kim, Jungeun; Tanaka, Hiroshi

2009-08-01

Cation and/or molecule transfer within nanoporous materials can be utilized in, for example, electrochromic devices, hydrogen storage, molecular sensors, and molecular filters. Here, we investigated the mobilities of cations, Na+, K+, and Rb+, in vacancy-controlled Prussian blue film, NaxCo[Fe(CN)6]1-vzH2O (v is vacancy concentration) with a jungle gym structure. We found that only the smallest Na+ ions pass through the cubic planes of the lattice, while the larger cations, i.e., K+ and Rb+, take a detour channel along the [Fe(CN)6] vacancy. The size-dependent cation channel is well understood in terms of the potential curve derived by an ab initio total energy calculation.

Analytical study of a microfludic DNA amplification chip using water cooling effect.

PubMed

Chen, Jyh Jian; Shen, Chia Ming; Ko, Yu Wei

2013-04-01

A novel continuous-flow polymerase chain reaction (PCR) chip has been analyzed in our work. Two temperature zones are controlled by two external controllers and the other temperature zone at the chip center is controlled by the flow rate of the fluid inside a channel under the glass chip. By employing a water cooling channel at the chip center, the sequence of denaturation, annealing, and extension can be created due to the forced convection effect. The required annealing temperature of PCR less than 313 K can also be demonstrated in this chip. The Poly(methyl methacrylate) (PMMA) cooling channel with the thin aluminum cover is utilized to enhance the temperature uniformity. The size of this chip is 76 mm × 26 mm × 3 mm. This device represents the first demonstration of water cooling thermocycling within continuous-flow PCR microfluidics. The commercial software CFD-ACE+(TM) is utilized to determine the distances between the heating assemblies within the chip. We investigate the influences of various chip materials, operational parameters of the cooling channel and geometric parameters of the chip on the temperature uniformity on the chip surface. Concerning the temperature uniformity of the working zones and the lowest temperature at the annealing zone, the air gap spacing of 1 mm and the cooling channel thicknesses of 1 mm of the PMMA channel with an aluminum cover are recommended in our design. The hydrophobic surface of the PDMS channel was modified by filling it with 20 % Tween 20 solution and then adding bovine serum albumin (BSA) solution to the PCR mixture. DNA fragments with different lengths (372 bp and 478 bp) are successfully amplified with the device.

Fe(2+) substrate transport through ferritin protein cage ion channels influences enzyme activity and biomineralization.

PubMed

Behera, Rabindra K; Torres, Rodrigo; Tosha, Takehiko; Bradley, Justin M; Goulding, Celia W; Theil, Elizabeth C

2015-09-01

Ferritins, complex protein nanocages, form internal iron-oxy minerals (Fe2O3·H2O), by moving cytoplasmic Fe(2+) through intracage ion channels to cage-embedded enzyme (2Fe(2+)/O2 oxidoreductase) sites where ferritin biomineralization is initiated. The products of ferritin enzyme activity are diferric oxy complexes that are mineral precursors. Conserved, carboxylate amino acid side chains of D127 from each of three cage subunits project into ferritin ion channels near the interior ion channel exits and, thus, could direct Fe(2+) movement to the internal enzyme sites. Ferritin D127E was designed and analyzed to probe properties of ion channel size and carboxylate crowding near the internal ion channel opening. Glu side chains are chemically equivalent to, but longer by one -CH2 than Asp, side chains. Ferritin D127E assembled into normal protein cages, but diferric peroxo formation (enzyme activity) was not observed, when measured at 650 nm (DFP λ max). The caged biomineral formation, measured at 350 nm in the middle of the broad, nonspecific Fe(3+)-O absorption band, was slower. Structural differences (protein X-ray crystallography), between ion channels in wild type and ferritin D127E, which correlate with the inhibition of ferritin D127E enzyme activity include: (1) narrower interior ion channel openings/pores; (2) increased numbers of ion channel protein-metal binding sites, and (3) a change in ion channel electrostatics due to carboxylate crowding. The contributions of ion channel size and structure to ferritin activity reflect metal ion transport in ion channels are precisely regulated both in ferritin protein nanocages and membranes of living cells.

Fe2+ Substrate Transport through Ferritin Protein Cage Ion Channels Influences Enzyme Activity and Biomineralization

PubMed Central

Behera, Rabindra K.; Torres, Rodrigo; Tosha, Takehiko; Bradley, Justin M.; Goulding, Celia W.; Theil, Elizabeth C.

2015-01-01

Ferritins, complex protein nanocages, form internal iron-oxy minerals (Fe2O3.H2O), by moving cytoplasmic Fe2+ through intracage ion channels to cage-embedded enzyme (2Fe2+/O2 oxidoreductase) sites where ferritin biomineralization is initiated. The products of ferritin enzyme activity are diferric oxy complexes that are mineral precursors. Conserved, carboxylate amino acid side chains of D127 from each of three cage subunits project into ferritin ion channels near the interior ion channel exits and, thus, could direct Fe2+ movement to the internal enzyme sites. Ferritin D127E was designed and analyzed to probe properties of ion channel size and carboxylate crowding near the internal ion channel opening. Glu side chains are chemically equivalent to, but longer by one – CH2 than Asp, side chains. Ferritin D127E assembled into normal protein cages, but diferric peroxo formation (enzyme activity) was not observed, when measured at 650nm (DFP λmax). The caged biomineral formation, measured at 350 nm in the middle of the broad, nonspecific Fe3+-O absorption band, was slower. Structural differences (protein X-ray crystallography), between ion channels in wild type and ferritin D127E, which correlate with the inhibition of ferritin D127E enzyme activity include: 1. narrower interior ion channel openings/pores, 2. increased numbers of ion channel protein-metal binding sites, and 3. a change in ion channel electrostatics due to carboxylate crowding. The contributions of ion channel size and structure to ferritin activity reflect metal ion transport in ion channels are precisely regulated both in ferritin protein nanocages and membranes of living cells. PMID:26202907

Carbon Dioxide-Lubricant Two-Phase Flow Patterns in Small Horizontal Wetted Wall Channels: The Effects of Refrigerant/Lubricant Thermophysical Properties

ERIC Educational Resources Information Center

Seeton, Christopher John

2009-01-01

Microchannel heat exchangers are gaining popularity due to their ability to handle high pressures, reduce refrigerant charge, and reduce heat exchanger package size. These heat exchanger designs provide better heat exchange performance due to increased refrigerant side heat transfer coefficients and geometries that allow for a denser packing…

Inversion of membrane surface charge by trivalent cations probed with a cation-selective channel

PubMed Central

Gurnev, Philip A.; Bezrukov, Sergey M.

2014-01-01

We demonstrate that the cation-selective channel formed by gramicidin A can be used as a reliable sensor for studying the multivalent ion accumulation at the surfaces of charged lipid membranes and the “charge inversion” phenomenon. In asymmetrically charged membranes with the individual leaflets formed from pure negative and positive lipids bathed by 0.1 M CsCl solutions the channel exhibits current rectification which is comparable to that of a typical n/p semiconductor diode. We show that even at these highly asymmetrical conditions the channel conductance can be satisfactorily described by the electrodiffusion equation in the constant field approximation but, due to predictable limitations, only when the applied voltages do not exceed 50 mV. Analysis of the changes in the voltage-dependent channel conductance upon addition of trivalent cations allows us to gauge their interactions with the membrane surface. The inversion of the sign of the effective surface charge takes place at the concentrations which correlate with the cation size. Specifically, these concentrations are close to 0.05 mM for lanthanum, 0.25 mM for hexaamminecobalt, and 4 mM for spermidine. PMID:23088396

Inversion of membrane surface charge by trivalent cations probed with a cation-selective channel.

PubMed

Gurnev, Philip A; Bezrukov, Sergey M

2012-11-13

We demonstrate that the cation-selective channel formed by gramicidin A can be used as a reliable sensor for studying the multivalent ion accumulation at the surfaces of charged lipid membranes and the "charge inversion" phenomenon. In asymmetrically charged membranes with the individual leaflets formed from pure negative and positive lipids bathed by 0.1 M CsCl solutions the channel exhibits current rectification, which is comparable to that of a typical n/p semiconductor diode. We show that even at these highly asymmetrical conditions the channel conductance can be satisfactorily described by the electrodiffusion equation in the constant field approximation but, due to predictable limitations, only when the applied voltages do not exceed 50 mV. Analysis of the changes in the voltage-dependent channel conductance upon addition of trivalent cations allows us to gauge their interactions with the membrane surface. The inversion of the sign of the effective surface charge takes place at the concentrations, which correlate with the cation size. Specifically, these concentrations are close to 0.05 mM for lanthanum, 0.25 mM for hexaamminecobalt, and 4 mM for spermidine.

Fast and accurate detection of cancer cell using a versatile three-channel plasmonic sensor

NASA Astrophysics Data System (ADS)

Hoseinian, M.; Ahmadi, A. R.; Bolorizadeh, M. A.

2016-09-01

Surface Plasmon Resonance (SPR) optical fiber sensors can be used as cost-effective small sized biosensors that are relatively simple to operate. Additionally, these instruments are label-free, hence rendering them highly sensitive to biological measurements. In this study, a three-channel microstructure optical fiber plasmonic-based portable biosensor is designed and analyzed using Finite Element Method. The proposed system is capable of determining changes in sample's refractive index with precision of order one thousandth. The biosensor measures three absorption resonance wavelengths of the analytes simultaneously. This property is one of the main advantages of the proposed biosensor since it reduces the error in the measured wavelength and enhances the accuracy of the results up to 10-5 m/RIU by reducing noise. In this paper, Jurkat cell, an indicator cell for leukemia cancer, is considered as the analyte; and its absorption resonance wavelengths as well as sensitivity in each channel are determined.

Carbon nanotube circuit integration up to sub-20 nm channel lengths.

PubMed

Shulaker, Max Marcel; Van Rethy, Jelle; Wu, Tony F; Liyanage, Luckshitha Suriyasena; Wei, Hai; Li, Zuanyi; Pop, Eric; Gielen, Georges; Wong, H-S Philip; Mitra, Subhasish

2014-04-22

Carbon nanotube (CNT) field-effect transistors (CNFETs) are a promising emerging technology projected to achieve over an order of magnitude improvement in energy-delay product, a metric of performance and energy efficiency, compared to silicon-based circuits. However, due to substantial imperfections inherent with CNTs, the promise of CNFETs has yet to be fully realized. Techniques to overcome these imperfections have yielded promising results, but thus far only at large technology nodes (1 μm device size). Here we demonstrate the first very large scale integration (VLSI)-compatible approach to realizing CNFET digital circuits at highly scaled technology nodes, with devices ranging from 90 nm to sub-20 nm channel lengths. We demonstrate inverters functioning at 1 MHz and a fully integrated CNFET infrared light sensor and interface circuit at 32 nm channel length. This demonstrates the feasibility of realizing more complex CNFET circuits at highly scaled technology nodes.

Superhydrophobic nanofluidic channels for enhanced electrokinetic conversion

NASA Astrophysics Data System (ADS)

Checco, Antonio; Al Hossain, Aktaruzzaman; Rahmani, Amir; Black, Charles; Doerk, Gregory; Colosqui, Carlos

2017-11-01

We present current efforts in the development of novel slit nanofluidic channels with superhydrophobic nanostructured surfaces designed to enhance hydrodynamic conductivity and improve selective transport and electrokinetic energy conversion efficiencies (mechanical-electrical energy conversion). The nanochannels are fabricated on silicon wafers using UV lithography, and their internal surface is patterned with conical nanostructures (feature size and spacing 30 nm) defined by block copolymer self-assembly and plasma etching. These nanostructures are rendered superhydrophobic by passivation with a hydrophobic silane monolayer. We experimentally characterize hydrodynamic conductivity, effective zeta potentials, and eletrokinetic flows for the patterned nanochannels, comparing against control channels with bare surfaces. Experimental observations are rationalized using both continuum-based modeling and molecular dynamics simulations. Scientific and technical knowledge produced by this work is particularly relevant for sustainable energy conversion and storage, separation processes and water treatment using nanoporous materials. The ONR Contract # N000141613178 and NSF-CBET award# 1605809.

Melting of Wigner Crystal on Helium in Quasi-One-Dimensional Geometry

NASA Astrophysics Data System (ADS)

Ikegami, Hiroki; Akimoto, Hikota; Kono, Kimitoshi

2015-05-01

We discuss melting of a Wigner crystal formed on a free surface of superfluid He, in quasi-one-dimensional (Q1D) channels of width between 5 and 15 m. We reexamine our previous transport data (Ikegami et al. in Phys Rev B 82:201104(R), 2010), in particular, by estimating the number of electrons across the channel in a more accurate way with the aid of numerical calculations of distributions of the electrons in the channels. The results of reexamination indicate more convincingly that the melting of the Wigner crystal in the Q1D geometry is understood by the finite size effect on the Kosterlitz-Thouless-Halperin-Nelson-Young melting process. We also present technical details of the transport measurements of the electrons in a Q1D geometry, including a fabrication method of devices used for the transport measurements, numerical simulations of response of the devices, and a procedure for analyzing transport data.

p - n Junction Dynamics Induced in a Graphene Channel by Ferroelectric-Domain Motion in the Substrate

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kurchak, Anatolii I.; Eliseev, Eugene A.; Kalinin, Sergei V.

The p - n junction dynamics induced in a graphene channel by stripe-domain nucleation, motion, and reversal in a ferroelectric substrate is explored using a self-consistent approach based on Landau-Ginzburg-Devonshire phenomenology combined with classical electrostatics. Relatively low gate voltages are required to induce the hysteresis of ferroelectric polarization and graphene charge in response to the periodic gate voltage. Pronounced nonlinear hysteresis of graphene conductance with a wide memory window corresponds to high amplitudes of gate voltage. Also, we reveal the extrinsic size effect in the dependence of the graphene-channel conductivity on its length. We predict that the top-gate–dielectric-layer–graphene-channel–ferroelectric-substrate nanostructure consideredmore » here can be a promising candidate for the fabrication of the next generation of modulators and rectifiers based on the graphene p - n junctions.« less

Effect of geometrical configuration of sediment replenishment on the development of bed form patterns in a gravel bed channel

NASA Astrophysics Data System (ADS)

Battisacco, Elena; Franca, Mário J.; Schleiss, Anton J.

2016-04-01

Dams interrupt the longitudinal continuity of river reaches since they store water and trap sediment in the upstream reservoir. By the interruption of the sediment continuum, the transport capacity of downstream stretch exceeds the sediment supply, thus the flow becomes "hungry". Sediment replenishment is an increasingly used method for restoring the continuity in rivers and for re-establishing the sediment regime of such disturbed river reaches. This research evaluates the effect of different geometrical configurations of sediment replenishment on the evolution of the bed morphology by systematic laboratory experiments. A typical straight armoured gravel reach is reproduced in a laboratory flume in terms of slope, grain size and cross section. The total amount of replenished sediment is placed in four identical volumes on both channel banks, forming six different geometrical configurations. Both alternated and parallel combinations are studied. Preliminary studies demonstrate that a complete submergence condition of the replenishment deposits is most adequate for obtaining a complete erosion and a high persistence of the replenished material in the channel. The response of the channel bed morphology to replenishment is documented by camera and laser scanners installed on a moveable carriage. The parallel configurations create an initially strong narrowing of the channel section. The transport capacity is thus higher and most of the replenished sediments exit the channel. The parallel configurations result in a more spread distribution of grains but with no clear morphological pattern. Clear bed form patterns can be observed when applying alternated configurations. Furthermore, the wavelength of depositions correspond to the replenishment deposit length. These morphological forms can be assumed as mounds. In order to enhance channel bed morphology on an armoured bed by sediment replenishment, alternated deposit configurations are more favourable and effective. The present study is supported by FOEN (Federal Office for the Environment, Switzerland).

A 31-channel MR brain array coil compatible with positron emission tomography.

PubMed

Sander, Christin Y; Keil, Boris; Chonde, Daniel B; Rosen, Bruce R; Catana, Ciprian; Wald, Lawrence L

2015-06-01

Simultaneous acquisition of MR and positron emission tomography (PET) images requires the placement of the MR detection coil inside the PET detector ring where it absorbs and scatters photons. This constraint is the principal barrier to achieving optimum sensitivity on each modality. Here, we present a 31-channel PET-compatible brain array coil with reduced attenuation but improved MR sensitivity. A series of component tests were performed to identify tradeoffs between PET and MR performance. Aspects studied include the remote positioning of preamplifiers, coax size, coil trace size/material, and plastic housing. We then maximized PET performance at minimal cost to MR sensitivity. The coil was evaluated for MR performance (signal to noise ratio [SNR], g-factor) and PET attenuation. The coil design showed an improvement in attenuation by 190% (average) compared with conventional 32-channel arrays, and no loss in MR SNR. Moreover, the 31-channel coil displayed an SNR improvement of 230% (cortical region of interest) compared with a PET-optimized 8-channel array with similar attenuation properties. Implementing attenuation correction of the 31-channel array successfully removed PET artifacts, which were comparable to those of the 8-channel array. The design of the 31-channel PET-compatible coil enables higher sensitivity for PET/MR imaging, paving the way for novel applications in this hybrid-imaging domain. © 2014 Wiley Periodicals, Inc.

Electrofishing effort requirements for estimating species richness in the Kootenai River, Idaho

USGS Publications Warehouse

Watkins, Carson J.; Quist, Michael C.; Shepard, Bradley B.; Ireland, Susan C.

2016-01-01

This study was conducted on the Kootenai River, Idaho to provide insight on sampling requirements to optimize future monitoring effort associated with the response of fish assemblages to habitat rehabilitation. Our objective was to define the electrofishing effort (m) needed to have a 95% probability of sampling 50, 75, and 100% of the observed species richness and to evaluate the relative influence of depth, velocity, and instream woody cover on sample size requirements. Sidechannel habitats required more sampling effort to achieve 75 and 100% of the total species richness than main-channel habitats. The sampling effort required to have a 95% probability of sampling 100% of the species richness was 1100 m for main-channel sites and 1400 m for side-channel sites. We hypothesized that the difference in sampling requirements between main- and side-channel habitats was largely due to differences in habitat characteristics and species richness between main- and side-channel habitats. In general, main-channel habitats had lower species richness than side-channel habitats. Habitat characteristics (i.e., depth, current velocity, and woody instream cover) were not related to sample size requirements. Our guidelines will improve sampling efficiency during monitoring effort in the Kootenai River and provide insight on sampling designs for other large western river systems where electrofishing is used to assess fish assemblages.

Fat fractal scaling of drainage networks from a random spatial network model

USGS Publications Warehouse

Karlinger, Michael R.; Troutman, Brent M.

1992-01-01

An alternative quantification of the scaling properties of river channel networks is explored using a spatial network model. Whereas scaling descriptions of drainage networks previously have been presented using a fractal analysis primarily of the channel lengths, we illustrate the scaling of the surface area of the channels defining the network pattern with an exponent which is independent of the fractal dimension but not of the fractal nature of the network. The methodology presented is a fat fractal analysis in which the drainage basin minus the channel area is considered the fat fractal. Random channel networks within a fixed basin area are generated on grids of different scales. The sample channel networks generated by the model have a common outlet of fixed width and a rule of upstream channel narrowing specified by a diameter branching exponent using hydraulic and geomorphologic principles. Scaling exponents are computed for each sample network on a given grid size and are regressed against network magnitude. Results indicate that the size of the exponents are related to magnitude of the networks and generally decrease as network magnitude increases. Cases showing differences in scaling exponents with like magnitudes suggest a direction of future work regarding other topologic basin characteristics as potential explanatory variables.

Flood magnitude-frequency analysis and sediment transport capacity rate assessment in a mixed alluvial-bedrock channel at Val Lumnezia, Eastern Switzerland, (Graubünden)

NASA Astrophysics Data System (ADS)

Bekaddour, T.

2012-04-01

There is growing evidence in the literature that flood frequency has a large impact on the effective time scale of hillslope-derived sediment transport. Here, we present quantitative data on sediment transport in the mountainous Glenner River that drains the 120 km2-large Val Lumnezia basin, eastern Swiss Alps. The longitudinal profile of this stream is characterized by the presence of three ca. 500 m-long knickzones where channel gradients range from 0.02 to 0.2 mm-1 and the stream narrows to < 2 m wide gorges. Upstream and downstream of these knickzone reaches, the stream is flat with gradients < 0.01 mm-1, and cross-sectional widths ≥ 30 m. Measurements of the grain size distribution along the stream yield d84 values that range from ca. 10 to 28 cm, whereas the d50 values scatter around 10 cm. We explore the consequences of the channel morphology and the grain size distribution for the time scales of sediment transport by using a 1-D step-back water hydraulic model (HEC-RAS), to estimate hydraulic conditions at number of flood events and to predict hydraulic parameters and the boundary shear stress. The results reveal that along the knickzone reaches, a 2 years return period flood event Q2 is capable of mobilizing the d84 fraction where boundary critical shear stress exceeds the Shields critical shear stress value at incipient motion. In all other flat stream segments, the d84 fraction is barely attaining incipient motion where the critical boundary shear stress is approximately equal to the Shields critical shear stress at incipient motion. The results differ for smaller grain sizes , where Q2 is capable of mobilizing the d50 fraction along the entire stream. We anticipate that the overall effect of Q2 floods is the enrichment of coarse-grained sediment in the flat channel reaches by the entrainment of the d50 fraction, shifting to a better sorting of the bed particles. As a result, the degree of interlocking of coarse grain material may increases, which ultimately leads to enhanced stabilization of the channel bed and thus to a higher threshold of critical stress of incipient motion. Q10 floods, in contrast, are capable of moving both the d50 and d84 fractions, which implies that Q10 represents an effective flood that is results in the evacuation of hillslope-derived material over longer distances. Our results thus support the idea that the mechanisms and timescales of sediment transport in high mountain streams strongly depend on stream geometry and flood magnitude-frequency.

Flashy Water and Sediment Delivery to Fluvial Megafan andFan Delta Systems on Opposing Shorelines of an Early Eocene Lake

NASA Astrophysics Data System (ADS)

Jones, E. R.; Plink-Bjorklund, P.

2015-12-01

Flashy delivery of water and sediment had distinct effects on the process of deposition in coeval fluvial megafan and fan delta deposits on opposing shorelines of a paleolake that occupied the Uinta Basin throughout the Eocene. The Tertiary Uinta Basin was an asymmetric continental interior basin with a steep northern margin, adjacent to the block uplift controlling basin subsidence, and a low gradient southern margin. A ~140 km wide fluvial megafan with catchments as far as ~750 km away occupied the southern margin of the lacustrine basin. Within this megafan system, fluvial deposits contain within-channel continental bioturbation and paleosol development on bar accretion surfaces that are evidence of prolonged periods of groundwater flow or channel abandonment. These are punctuated by channel fills exhibiting a suite of both high-deposition rate and upper flow regime sedimentary structures that were deposited by very rapid suspension-fallout during seasonal to episodic river flooding events. A series of small (~8 km wide) and proximally sourced fan deltas fed sediment into the steeper northern margin of the lacustrine basin. 35-50% of the deposits in the delta plain environment of these fan deltas are very sandy debris flows with as low as 5% clay and silt sized material. Detrital zircon geochronology shows that these fan deltas were tapping catchments where mostly unconsolidated Cretaceous sedimentary cover and thick Jurassic eolianites were being eroded. A combination of flashy precipitation, arid climate, catchments mantled by abundant loose sand-sized colluvium, and steep depositional gradients promoted generation of abundant very sandy (5-10% clay and silt sized material) debris flows. In this way, the Wasatch and Green River Formations in the Uinta Basin, Utah, U.S.A. gives us two very different examples of how routing flashy water and sediment delivery (associated with pulses of hyperthermal climate change during the Early Eocene) through different depositional systems produced unique processes of deposition, and also gives us an opportunity to isolate the effects of other variables (e.g. sediment caliber, system gradient, catchment size) that can modulate the flashy precipitation signal in stratigraphy.

Axially Tapered And Bilayer Microchannels For Evaporative Cooling Devices

DOEpatents

Nilson, Robert; Griffiths, Stewart

2005-10-04

The invention consists of an evaporative cooling device comprising one or more microchannels whose cross section is axially reduced to control the maximum capillary pressure differential between liquid and vapor phases. In one embodiment, the evaporation channels have a rectangular cross section that is reduced in width along a flow path. In another embodiment, channels of fixed width are patterned with an array of microfabricated post-like features such that the feature size and spacing are gradually reduced along the flow path. Other embodiments incorporate bilayer channels consisting of an upper cover plate having a pattern of slots or holes of axially decreasing size and a lower fluid flow layer having channel widths substantially greater than the characteristic microscale dimensions of the patterned cover plate. The small dimensions of the cover plate holes afford large capillary pressure differentials while the larger dimensions of the lower region reduce viscous flow resistance.

Seismic signals of snow-slurry lahars in motion: 25 September 2007, Mt Ruapehu, New Zealand

NASA Astrophysics Data System (ADS)

Cole, S. E.; Cronin, S. J.; Sherburn, S.; Manville, V.

2009-05-01

Detection of ground shaking forms the basis of many lahar-warning systems. Seismic records of two lahar types at Ruapehu, New Zealand, in 2007 are used to examine their nature and internal dynamics. Upstream detection of a flow depends upon flow type and coupling with the ground. 3-D characteristics of seismic signals can be used to distinguish the dominant rheology and gross physical composition. Water-rich hyperconcentrated flows are turbulent; common inter-particle and particle-substrate collisions engender higher energy in cross-channel vibrations relative to channel-parallel. Plug-like snow-slurry lahars show greater energy in channel-parallel signals, due to lateral deposition insulating channel margins, and low turbulence. Direct comparison of flow size must account for flow rheology; a water-rich lahar will generate signals of greater amplitude than a similar-sized snow-slurry flow.

Continuous-wave laser generated jets for needle free applications

PubMed Central

Visser, Claas Willem; Schlautmann, Stefan

2016-01-01

We designed and built a microfluidic device for the generation of liquid jets produced by thermocavitation. A continuous wave (CW) laser was focused inside a micro-chamber filled with a light-absorbing solution to create a rapidly expanding vapor bubble. The chamber is connected to a micro-channel which focuses and ejects the liquid jet through the exit. The bubble growth and the jet velocity were measured as a function of the devices geometry (channel diameter D and chamber width A). The fastest jets were those for relatively large chamber size with respect to the channel diameter. Elongated and focused jets up to 29 m/s for a channel diameter of 250 μm and chamber size of 700 μm were obtained. The proposed CW laser-based device is potentially a compact option for a practical and commercially feasible needle-free injector. PMID:26858816

Substrate effect on nanoporous structure of silica wires by channel-confined self-assembly of block-copolymer and sol-gel precursors

DOE PAGES

Hu, Michael Z.; Lai, Peng

2015-09-22

Nanoporous silica wires of various wire diameters were developed by space-confined molecular self-assembly of triblock copolymer ethylene/propylene/ethylene (P123) and silica alkoxide precursor (tetraethylorthosilicate, TEOS). Two distinctive hard-templating substrates, anodized aluminum oxide (AAO) and track-etched polycarbonate (EPC), with channel diameters in the range between 10 nm and 200 nm were employed for space-confinement of soft molecular self-assembly driven by the block-copolymer microphase separation. It was observed in the scanning and transmission electron microscope (STEM) studies that the substrate geometry and material characteristics had pronounced effects on the structure and morphology of the silica nanowires. A substrate wall effect was proposed tomore » explain the ordering and orientation of the intra-wire mesostructure. Circular and spiral nanostructures were found only in wires formed in AAO substrate, not in EPC. Pore-size differences and distinctive wall morphologies of the nanowires relating to the substrates were discussed. It was shown that the material and channel wall characteristics of different substrates play key roles in the ordering and morphology of the intra-wire nanostructures.« less

Diffusion-Based Model for Synaptic Molecular Communication Channel.

PubMed

Khan, Tooba; Bilgin, Bilgesu A; Akan, Ozgur B

2017-06-01

Computational methods have been extensively used to understand the underlying dynamics of molecular communication methods employed by nature. One very effective and popular approach is to utilize a Monte Carlo simulation. Although it is very reliable, this method can have a very high computational cost, which in some cases renders the simulation impractical. Therefore, in this paper, for the special case of an excitatory synaptic molecular communication channel, we present a novel mathematical model for the diffusion and binding of neurotransmitters that takes into account the effects of synaptic geometry in 3-D space and re-absorption of neurotransmitters by the transmitting neuron. Based on this model we develop a fast deterministic algorithm, which calculates expected value of the output of this channel, namely, the amplitude of excitatory postsynaptic potential (EPSP), for given synaptic parameters. We validate our algorithm by a Monte Carlo simulation, which shows total agreement between the results of the two methods. Finally, we utilize our model to quantify the effects of variation in synaptic parameters, such as position of release site, receptor density, size of postsynaptic density, diffusion coefficient, uptake probability, and number of neurotransmitters in a vesicle, on maximum number of bound receptors that directly affect the peak amplitude of EPSP.

Coevolution of bed surface patchiness and channel morphology: 2. Numerical experiments

USGS Publications Warehouse

Nelson, Peter A.; McDonald, Richard R.; Nelson, Jonathan M.; Dietrich, William E.

2015-01-01

In gravel bed rivers, bed topography and the bed surface grain size distribution evolve simultaneously, but it is not clear how feedbacks between topography and grain sorting affect channel morphology. In this, the second of a pair of papers examining interactions between bed topography and bed surface sorting in gravel bed rivers, we use a two-dimensional morphodynamic model to perform numerical experiments designed to explore the coevolution of both free and forced bars and bed surface patches. Model runs were carried out on a computational grid simulating a 200 m long, 2.75 m wide, straight, rectangular channel, with an initially flat bed at a slope of 0.0137. Over five numerical experiments, we varied (a) whether an obstruction was present, (b) whether the sediment was a gravel mixture or a single size, and (c) whether the bed surface grain size feeds back on the hydraulic roughness field. Experiments with channel obstructions developed a train of alternate bars that became stationary and were connected to the obstruction. Freely migrating alternate bars formed in the experiments without channel obstructions. Simulations incorporating roughness feedbacks between the bed surface and flow field produced flatter, broader, and longer bars than simulations using constant roughness or uniform sediment. Our findings suggest that patches are not simply a by-product of bed topography, but they interact with the evolving bed and influence morphologic evolution.

AT1 and aldosterone receptors blockade prevents the chronic effect of nandrolone on the exercise-induced cardioprotection in perfused rat heart subjected to ischemia and reperfusion.

PubMed

Marques-Neto, Silvio Rodrigues; Ferraz, Emanuelle Baptista; Rodrigues, Deivid Carvalho; Njaine, Brian; Rondinelli, Edson; Campos de Carvalho, Antônio Carlos; Nascimento, Jose Hamilton Matheus

2014-04-01

Myocardial tolerance to ischaemia/reperfusion (I/R) injury is improved by exercise training, but this cardioprotection is impaired by the chronic use of anabolic androgenic steroids (AAS). The present study evaluated whether blockade of angiotensin II receptor (AT1-R) with losartan and aldosterone receptor (mineralocorticoid receptor, MR) with spironolactone could prevent the deleterious effect of AAS on the exercise-induced cardioprotection. Male Wistar rats were exercised and treated with either vehicle, nandrolone decanoate (10 mg/kg/week i.m.) or the same dose of nandrolone plus losartan or spironolactone (20 mg/kg/day orally) for 8 weeks. Langendorff-perfused hearts were subjected to I/R and evaluated for the postischaemic recovery of left ventricle (LV) function and infarct size. mRNA and protein expression of angiotensin II type 1 receptor (AT1-R), mineralocorticoid receptor (MR), and KATP channels were determined by reverse-transcriptase polymerase chain reaction and Western blotting. Postischaemic recovery of LV function was better and infarct size was smaller in the exercised rat hearts than in the sedentary rat hearts. Nandrolone impaired the exercise-induced cardioprotection, but this effect was prevented by losartan (AT1-R antagonist) and spironolactone (MR antagonist) treatments. Myocardial AT1-R and MR expression levels were increased, and the expression of the KATP channel subunits SUR2a and Kir6.1 was decreased and Kir6.2 increased in the nandrolone-treated rat hearts. The nandrolone-induced changes of AT1-R, MR, and KATP subunits expression was normalized by the losartan and spironolactone treatments. The chronic nandrolone treatment impairs the exercise-induced cardioprotection against ischaemia/reperfusion injury by activating the cardiac renin-angiotensin-aldosterone system and downregulating KATP channel expression.

Continuous form-dependent focusing of non-spherical microparticles in a highly diluted suspension with the help of microfluidic spirals

NASA Astrophysics Data System (ADS)

Roth, Tanja; Sprenger, Lisa; Odenbach, Stefan; Häfeli, Urs O.

2018-04-01

Microfluidic spirals are able to focus non-spherical microparticles in diluted suspension due to the Dean effect. A secondary flow establishes in a curved channel, consisting of two counter-rotating vortices, which transport particles to an equilibrium position near the inner wall of the channel. The relevant size parameter, which is responsible for successful focusing, is the ratio between the particle diameter of a sphere and the hydraulic diameter, which is a characteristic of the microfluidic spiral. A non-spherical particle has not one but several different size parameters. This study investigated the minor and major axes, the equivalent spherical diameter, and the maximal rotational diameter as an equivalent to the spherical diameter. Using a polydimethylsiloxane (PDMS)-based microfluidic device with spirals, experiments were conducted with artificial peanut-shaped and ellipsoidal particles sized between 3 and 9 μm as well as with the bacteria Bacillus subtilis. Our investigations show that the equivalent spherical diameter, the major axis, and the maximal rotational diameter of a non-spherical particle can predict successful focusing. The minor axis is not suitable for this purpose. Non-spherical particles focused when the ratio of their equivalent spherical diameter to the hydraulic diameter of the channel was larger than 0.07. The particles also focused when the ratio between the maximal rotational diameter or the major axis and the hydraulic diameter was larger than 0.01. These results may help us to separate non-spherical biological particles, such as circulating tumor cells or pathogenic bacteria, from blood in future experimental studies.

Structural characteristics of hydrated protons in the conductive channels: effects of confinement and fluorination studied by molecular dynamics simulation.

PubMed

Zhang, Ning; Song, Yuechun; Ruan, Xuehua; Yan, Xiaoming; Liu, Zhao; Shen, Zhuanglin; Wu, Xuemei; He, Gaohong

2016-09-21

The relationship between the proton conductive channel and the hydrated proton structure is of significant importance for understanding the deformed hydrogen bonding network of the confined protons which matches the nanochannel. In general, the structure of hydrated protons in the nanochannel of the proton exchange membrane is affected by several factors. To investigate the independent effect of each factor, it is necessary to eliminate the interference of other factors. In this paper, a one-dimensional carbon nanotube decorated with fluorine was built to investigate the independent effects of nanoscale confinement and fluorination on the structural properties of hydrated protons in the nanochannel using classical molecular dynamics simulation. In order to characterize the structure of hydrated protons confined in the channel, the hydrogen bonding interaction between water and the hydrated protons has been studied according to suitable hydrogen bond criteria. The hydrogen bond criteria were proposed based on the radial distribution function, angle distribution and pair-potential energy distribution. It was found that fluorination leads to an ordered hydrogen bonding structure of the hydrated protons near the channel surface, and confinement weakens the formation of the bifurcated hydrogen bonds in the radial direction. Besides, fluorination lowers the free energy barrier of hydronium along the nanochannel, but slightly increases the barrier for water. This leads to disintegration of the sequential hydrogen bond network in the fluorinated CNTs with small size. In the fluorinated CNTs with large diameter, the lower degree of confinement produces a spiral-like sequential hydrogen bond network with few bifurcated hydrogen bonds in the central region. This structure might promote unidirectional proton transfer along the channel without random movement. This study provides the cooperative effect of confinement dimension and fluorination on the structure and hydrogen bonding of the slightly acidic water in the nanoscale channel.

Large woody debris budgets in the Caspar Creek Experimental Watersheds

Treesearch

Sue Hilton

2012-01-01

Monitoring of large woody debris (LWD) in the two mainstem channels of the Caspar Creek Experimental Watersheds since 1998, combined with older data from other work in the watersheds, gives estimates of channel wood input rates, survival, and outputs in intermediate-sized channels in coastal redwood forests. Input rates from standing trees for the two reaches over a 15...

Investigating the influence of lithologic heterogeneity on gas hydrate formation and methane recycling at the base of the gas hydrate stability zone in channelized systems

NASA Astrophysics Data System (ADS)

Daigle, H.; Nole, M.; Cook, A.; Malinverno, A.

2017-12-01

In marine environments, gas hydrate preferentially accumulates in coarse-grained sediments. At the meso- to micro-scale, however, hydrate distribution in these coarse-grained units is often heterogeneous. We employ a methane hydrate reservoir simulator coupling heat and mass transfer as well as capillary effects to investigate how capillary controls on methane solubility affect gas and hydrate accumulations in reservoirs characterized by graded bedding and alternating sequences of coarse-grained sands and fine-grained silt and clay. Simulations bury a channelized reservoir unit encased in homogeneous, fine-grained material characterized by small pores (150 nm) and low permeability ( 1 md in the absence of hydrate). Pore sizes within each reservoir bed between vary between coarse sand and fine silt. Sands have a median pore size of 35 microns and a lognormal pore size distribution. We also investigate how the amount of labile organic carbon (LOC) affects hydrate growth due to microbial methanogenesis within the sediments. In a diffusion-dominated system, methane movies into reservoir layers along spatial gradients in dissolved methane concentration. Hydrate grows in such a way as to minimize these concentration gradients by accumulating slower in finer-grained reservoir layers and faster in coarser-grained layers. Channelized, fining-upwards sediment bodies accumulate hydrate first along their outer surfaces and thence inward from top to bottom. If LOC is present in thin beds within the channel, higher saturations of hydrate will be distributed more homogeneously throughout the unit. When buried beneath the GHSZ, gas recycling can occur only if enough hydrate is present to form a connected gas phase upon dissociation. Simulations indicate that this is difficult to achieve for diffusion-dominated systems, especially those with thick GHSZs and/or small amounts of LOC. However, capillary-driven fracturing behavior may be more prevalent in settings with thick GHSZs.

Investigating the influence of lithologic heterogeneity on gas hydrate formation and methane recycling at the base of the gas hydrate stability zone in channelized systems

DOE Office of Scientific and Technical Information (OSTI.GOV)

Daigle, Hugh; Nole, Michael; Cook, Ann

In marine environments, gas hydrate preferentially accumulates in coarse-grained sediments. At the meso- to micro-scale, however, hydrate distribution in these coarse-grained units is often heterogeneous. We employ a methane hydrate reservoir simulator coupling heat and mass transfer as well as capillary effects to investigate how capillary controls on methane solubility affect gas and hydrate accumulations in reservoirs characterized by graded bedding and alternating sequences of coarse-grained sands and fine-grained silt and clay. Simulations bury a channelized reservoir unit encased in homogeneous, fine-grained material characterized by small pores (150 nm) and low permeability (~1 md in the absence of hydrate). Poremore » sizes within each reservoir bed between vary between coarse sand and fine silt. Sands have a median pore size of 35 microns and a lognormal pore size distribution. We also investigate how the amount of labile organic carbon (LOC) affects hydrate growth due to microbial methanogenesis within the sediments. In a diffusion-dominated system, methane movies into reservoir layers along spatial gradients in dissolved methane concentration. Hydrate grows in such a way as to minimize these concentration gradients by accumulating slower in finer-grained reservoir layers and faster in coarser-grained layers. Channelized, fining-upwards sediment bodies accumulate hydrate first along their outer surfaces and thence inward from top to bottom. If LOC is present in thin beds within the channel, higher saturations of hydrate will be distributed more homogeneously throughout the unit. When buried beneath the GHSZ, gas recycling can occur only if enough hydrate is present to form a connected gas phase upon dissociation. Simulations indicate that this is difficult to achieve for diffusion-dominated systems, especially those with thick GHSZs and/or small amounts of LOC. However, capillary-driven fracturing behavior may be more prevalent in settings with thick GHSZs.« less

Hydrograph Shape Controls Channel Morphology and Organization in a Sand-Gravel Flume

NASA Astrophysics Data System (ADS)

Hempel, L. A.; Grant, G.; Hassan, M. A.; Eaton, B. C.

2016-12-01

A fundamental research question in fluvial geomorphology is to understand what flows shape river channels. Historically, the prevailing view has been that channel dimensions adjust to a so-termed "dominant discharge", which is often approximated as the bankfull flow. But using a single flow to reference the geomorphic effectiveness of an entire flow regime discounts many observations showing that different flows control different channel processes. Some flows entrain fine sediment, some entrain the full size distribution of bed sediment; some destabilize or build bars, some erode the banks, and so forth. To explore the relation between the full flow regime and channel morphology, we conducted a series of flume experiments to examine how hydrographs with different shapes, durations, and magnitudes result in different degrees of channel organization, which we define in terms of the regularity, spacing and architecture of self-formed channel features, such as bed patches, geometry and spacing of bedforms, and channel planform. Our experiments were run in a 12m long adjustable-width flume that developed a self-formed meandering, pool-riffle pattern. We found that hydrograph shape does control channel organization. In particular, channels formed by hydrographs with slower rising limbs and broader peaks were more organized than those formed by flashier hydrographs. To become organized, hydrographs needed to exceed a minimum flow threshold, defined by the intensity of sediment transport; below which the channel lacked bedforms and a regular meander pattern. Above an upper flow threshold, bars became disorganized and the channel planform transitioned towards braiding. Field studies of channels with different flow regimes but located in a similar physiographic setting support our experimental findings. Taken together, this work points to the importance of the hydrograph as a fundamental control on channel morphology, and offers the prospect of better understanding how changing hydrologic regimes, either through climate, land use, or dams, translates into geomorphic changes.

Metals concentrations in sediments and oyster Crassostrea gigas from La Pitahaya lagoon, Sinaloa, NW Mexico

NASA Astrophysics Data System (ADS)

Luna Varela, R.; Muñoz Sevilla, N.; Campos Villegas, L.; Rodriguez Espinosa, P.; Gongora Gomez, A.; MP, J.

2013-05-01

This present study was performed in a culture of Crassostrea gigas in La Pitahaya, Sinaloa, México. The main objective is to identify the enrichment pattern of trace elements (Cu, Cd, Cr, Ni, Pb, Zn, Hg, As, V) also was determine concentrations thereof in oyster. Four sampling sites were selected, two smaller channels which connect the lagoon directly , the region of culture and connection with the sea ; and each sampling consisted of 4 sample sediments and 50 oysters of commercial size per mounth . Concentrations of trace metals were determined using atomic absorption spectrophotometry (AAS). The higher concentration of elements in certain samples clearly suggests that they are directly fed by the smaller channels which connect the lagoon directly. These small channels often carry the contaminants which are absorbed and deposited in the sediments. The results were also compared with the Effect Range Low (ERL) and Effect Range Medium (ERM) of NOAA and it indicates that Ni is above the ERL values. Cadmium, lead, chrome and copper concentrations exceeded the limits permissible of bivalbe mollusks established by the sanitary regulations

Flow and Sedimentation of particulate suspensions in Fractures

NASA Astrophysics Data System (ADS)

Lo, Tak Shing; Koplik, Joel

2011-03-01

Suspended particles are commonly found in reservoir fluids. They alter the rheology of the flowing liquids and may obstruct transport by narrowing flow channels due to gravitational sedimentation. An understanding of the dynamics of particle transport and deposition is, therefore, important to many geological, enviromental and industrial processes. Realistic geological fractures usually have irregular surfaces with self-affine structures, and the surface roughness plays a crucial role in the flow and sedimentation processes. Recently, we have used the lattice Boltzmann method to study the combined effects of sedimentation and transport of particles suspended in a Newtonian fluid in a pressure-driven flow in self-affine channels, which is especially relevant to clogging phenomena where sediments may block fluid flows in narrow constrictions of the channels. The lattice Boltzmann method is flexible and particularly suitable for handling irregular geometry. Our work covers a broad range in Reynolds and buoyancy numbers, and in particle concentrations. In this talk, we focus on the transitions between the ``jammed'' and the ``flow'' states in fractures, and on the effects of nonuniform particle size distributions. Work supported by DOE and NERSC.

Non-Markovianity in the collision model with environmental block

NASA Astrophysics Data System (ADS)

Jin, Jiasen; Yu, Chang-shui

2018-05-01

We present an extended collision model to simulate the dynamics of an open quantum system. In our model, the unit to represent the environment is, instead of a single particle, a block which consists of a number of environment particles. The introduced blocks enable us to study the effects of different strategies of system–environment interactions and states of the blocks on the non-Markovianities. We demonstrate our idea in the Gaussian channels of an all-optical system and derive a necessary and sufficient condition of non-Markovianity for such channels. Moreover, we show the equivalence of our criterion to the non-Markovian quantum jump in the simulation of the pure damping process of a single-mode field. We also show that the non-Markovianity of the channel working in the strategy that the system collides with environmental particles in each block in a certain order will be affected by the size of the block and the embedded entanglement and the effects of heating and squeezing the vacuum environmental state will quantitatively enhance the non-Markovianity.

Investigation of Diffusion Characteristics through Microfluidic Channels for Passive Drug Delivery Applications

PubMed Central

Ghuman, Alyssa P.; Collins, Stephanie B.; Handa, Hitesh

2016-01-01

Microfluidics has many drug delivery applications due to the ability to easily create complex device designs with feature sizes reaching down to the 10s of microns. In this work, three different microchannel designs for an implantable device are investigated for treatment of ocular diseases such as glaucoma, age-related macular degeneration (AMD), and diabetic retinopathy. Devices were fabricated using polydimethylsiloxane (PDMS) and soft lithography techniques, where surface chemistry of the channels was altered using 2-[methoxy(polyethyleneoxy)propyl]trimethoxysilane (PEG-silane). An estimated delivery rate for a number of common drugs was approximated for each device through the ratio of the diffusion coefficients for the dye and the respective drug. The delivery rate of the model drugs was maintained at a physiological condition and the effects of channel design and surface chemistry on the delivery rate of the model drugs were recorded over a two-week period. Results showed that the surface chemistry of the device had no significant effect on the delivery rate of the model drugs. All designs were successful in delivering a constant daily dose for each model drug. PMID:27313895

Downstream Channel Change and Bed-material Transport along the North Fork Stillaguamish River Following the March 22, 2014 SR530 Landslide, Northwestern Washington, USA

NASA Astrophysics Data System (ADS)

Keith, M. K.; Anderson, S. W.; Magirl, C. S.

2015-12-01

The March 22, 2014, catastrophic landslide near Oso, Washington, rapidly emplaced approximately 8 million m3 of slide material onto the valley floor, blocking the North Fork Stillaguamish River. Overtopping of the landslide dam and subsequent channel incision through the deposit mobilized large volumes of the glacial outwash, till, and lacustrine (silts and clays) sediment. The abundant sediment introduced to the gravel-bed channel prompted concerns of downstream aggradation and elevated hazards from seasonal flooding and channel migration. Our assessment of downstream aggradation potential and channel change was primarily based on 1) comparison of pre-slide to post-slide field-based and remote-sensing observations, 2) measurements of bedload transport, and 3) modeling of bedload transport for eight flow scenarios between 25% of the 2-year flow and the 100-year flow at several sites along the lower 65-km alluvial portion of the river. Although measurements of pre-slide grain-size distributions were highly variable from year to year, comparison of those counts to 2014 post-slide measurements show a general fining of channel and bar surface material. Between 2014 and 2015, we observed coarsening at some bars, most notably for sediment smaller than 4 mm. From aerial photograph inspection, the shape, size, and distribution of gravel and sand bars between the landslide and the mouth of the North Fork Stillaguamish River appears to have been relatively unchanged between 2013 and 2015. Post-slide bedload transport capacity rates were calculated using Parker, Wilcock and Crowe, and two forms of Recking equations. Transport capacities for the narrow and confined channel where it has incised through the landslide are much greater compared with the low gradient and wide floodplain segments downstream. Nevertheless, because of fine grain sizes within the landslide debris, most of the sediment has been transported through the downstream channel, resulting in minimal aggradation.

Stepwise morphological evolution of the active Yellow River (Huanghe) delta lobe (1976-2013): Dominant roles of riverine discharge and sediment grain size

NASA Astrophysics Data System (ADS)

Wu, Xiao; Bi, Naishuang; Xu, Jingping; Nittrouer, Jeffrey A.; Yang, Zuosheng; Saito, Yoshiki; Wang, Houjie

2017-09-01

The presently active Yellow River (Huanghe) delta lobe has been formed since 1976 when the river was artificially diverted. The process and driving forces of morphological evolution of the present delta lobe still remain unclear. Here we examined the stepwise morphological evolution of the active Yellow River delta lobe including both the subaerial and the subaqueous components, and illustrated the critical roles of riverine discharge and sediment grain size in dominating the deltaic evolution. The critical sediment loads for maintaining the delta stability were also calculated from water discharge and sediment load measured at station Lijin, the last gauging station approximately 100 km upstream from the river mouth. The results indicated that the development of active delta lobe including both subaerial and subaqueous components has experienced four sequential stages. During the first stage (1976-1981) after the channel migration, the unchannelized river flow enhanced deposition within the channel and floodplain between Lijin station and the river mouth. Therefore, the critical sediment supply calculated by the river inputs obtained from station Lijin was the highest. However, the actual sediment load at this stage (0.84 Gt/yr) was more than twice of the critical sediment load ( 0.35 Gt/yr) for sustaining the active subaerial area, which favored a rapid seaward progradation of the Yellow River subaerial delta. During the second stage (1981-1996), the engineering-facilitated channelized river flow and the increase in median grain size of suspended sediment delivered to the sea resulted in the critical sediment load for keeping the delta stability deceasing to 0.29 Gt/yr. The active delta lobe still gradually prograded seaward at an accretion rate of 11.9 km2/yr at this stage as the annual sediment load at Lijin station was 0.55 Gt/yr. From 1996 to 2002, the critical sediment load further decreased to 0.15 Gt/yr with the sediment grain size increased to 22.5 μm; however, the delta suffered net erosion because of the insufficient sediment supply (0.11 Gt/yr). In the most recent stage (2002 - 2013), the intensive scouring of the lower river channel induced by the dam regulation provided relatively coarser sediment, which effectively reduced the critical sediment load to 0.06 Gt/yr, much lower than the corresponding sediment load at Lijin station ( 0.16 Gt/yr). Consequently, the subaerial Yellow River delta transitioned to a slight accretion phase. Overall, the evolution of the active Yellow River delta is highly correlated to riverine water and sediment discharge. The sediment supply for keeping the subaerial delta stability is inconstant and varying with the river channel morphology and sediment grain size. We conclude that the human-impacted riverine sediment discharge and grain-size composition play dominant roles in the stepwise morphological evolution of the active delta lobe.

Controls on alluvial fan long-profiles

USGS Publications Warehouse

Stock, J.D.; Schmidt, K.M.; Miller, D.M.

2008-01-01

Water and debris flows exiting confined valleys have a tendency to deposit sediment on steep fans. On alluvial fans where water transport of gravel predominates, channel slopes tend to decrease downfan from ???0.10-0.04 to ???0.01 across wide ranges of climate and tectonism. Some have argued that this pattern reflects grain-size fining downfan such that higher threshold slopes are required just to entrain coarser particles in the waters of the upper fan, whereas lower slopes are required to entrain finer grains downfan (threshold hypothesis). An older hypothesis is that slope is adjusted to transport the supplied sediment load, which decreases downfan as deposition occurs (transport hypothesis). We have begun to test these hypotheses for alluvial fan long-profiles using detailed hydraulic and particle-size data in sediment transport models. On four alluvial fans in the western U.S., we find that channel hydraulic radiiare largely 0.5-0.9 m at fan heads, decreasing to 0.1-0.2 m at distal margins. We find that median gravel diameter does not change systematically along the upper 60%-80% of active fan channels as slope declines, so downstream gravel fining cannot explain most of the observed channel slope reduction. However, as slope declines, channel-bed sand cover increases systematically downfan from areal fractions of <20% above fan heads to distal fan values in excess of 70%. As a result, entrainment thresholds for bed material might decrease systematically downfan, leading to lower slopes. However, current models of this effect alone tend to underpredict downfan slope changes. This is likely due to off-channel gravel deposition. Calculations that match observed fan long-profiles require an exponential decline in gravel transport rate, so that on some fans approximately half of the load must be deposited off channel every -0.20-1.4 km downfan. This leads us to hypothesize that some alluvial fan long-proffies are statements about the rate of overbank deposition of coarse particles downfan, a process for which there is currently no mechanistic theory. ?? 2007 Geological Society of America.

Assemblies and methods for mitigating effects of reactor pressure vessel expansion

DOEpatents

Challberg, Roy C.; Gou, Perng-Fei; Chu, Cherk Lam; Oliver, Robert P.

1999-01-01

Support assemblies for allowing RPV radial expansion while simultaneously limiting horizontal, vertical, and azimuthal movement of the RPV within a nuclear reactor are described. In one embodiment, the support assembly includes a support block and a guide block. The support block includes a first portion and a second portion, and the first portion is rigidly coupled to the RPV adjacent the first portion. The guide block is rigidly coupled to a reactor pressure vessel support structure and includes a channel sized to receive the second portion of the support block. The second portion of the support block is positioned in the guide block channel to movably couple the guide block to the support block.

Assemblies and methods for mitigating effects of reactor pressure vessel expansion

DOEpatents

Challberg, R.C.; Gou, P.F.; Chu, C.L.; Oliver, R.P.

1999-07-27

Support assemblies for allowing RPV radial expansion while simultaneously limiting horizontal, vertical, and azimuthal movement of the RPV within a nuclear reactor are described. In one embodiment, the support assembly includes a support block and a guide block. The support block includes a first portion and a second portion, and the first portion is rigidly coupled to the RPV adjacent the first portion. The guide block is rigidly coupled to a reactor pressure vessel support structure and includes a channel sized to receive the second portion of the support block. The second portion of the support block is positioned in the guide block channel to movably couple the guide block to the support block. 6 figs.

Large-size porous ZnO flakes with superior gas-sensing performance

NASA Astrophysics Data System (ADS)

Wen, Wei; Wu, Jin-Ming; Wang, Yu-De

2012-06-01

A simple top-down route is developed to fabricate large size porous ZnO flakes via solution combustion synthesis followed by a subsequent calcination in air, which is template-free and can be easily enlarged to an industrial scale. The achieved porous ZnO flakes, which are tens to hundreds of micrometers in flat and tens of nanometers in thickness, exhibit high response for detecting acetone and ethanol, because the unique two-dimensional architecture shortens effectively the gas diffusion distance and provides highly accessible open channels and active surfaces for the target gas.

Grain size mapping in shallow rivers using spectral information: a lab spectroradiometry perspective

NASA Astrophysics Data System (ADS)

Niroumand-Jadidi, Milad; Vitti, Alfonso

2017-10-01

Every individual attribute of a riverine environment defines the overall spectral signature to be observed by an optical sensor. The spectral characteristic of riverbed is influenced not only by the type but also the roughness of substrates. Motivated by this assumption, potential of optical imagery for mapping grain size of shallow rivers (< 1 m deep) is examined in this research. The previous studies concerned with grain size mapping are all built upon the texture analysis of exposed bed material using very high resolution (i.e. cm resolution) imagery. However, the application of texturebased techniques is limited to very low altitude sensors (e.g. UAVs) to ensure the sufficient spatial resolution. Moreover, these techniques are applicable only in the presence of exposed substrates along the river channel. To address these drawbacks, this study examines the effectiveness of spectral information to make distinction among grain sizes for submerged substrates. Spectroscopic experiments are performed in controlled condition of a hydraulic lab. The spectra are collected over a water flume in a range of water depths and bottoms with several grain sizes. A spectral convolution is performed to match the spectra to WorldView-2 spectral bands. The material type of substrates is considered the same for all the experiments with only variable roughness/size of grains. The spectra observed over dry beds revealed that the brightness/reflectance increases with the grain size across all the spectral bands. Based on this finding, the above-water spectra over a river channel are simulated considering different grain sizes in the bottom. A water column correction method is then used to retrieve the bottom reflectances. Then the inferred bottom reflectances are clustered to segregate among grain sizes. The results indicate high potential of the spectral approach for clustering grain sizes (overall accuracy of 92%) which opens up some horizons for mapping this valuable attribute of rivers using remotely sensed data.

Design of a novel multi channel photonic crystal fiber polarization beam splitter

NASA Astrophysics Data System (ADS)

Zhao, Yunyan; Li, Shuguang; Wang, Xinyu; Wang, Guangyao; Shi, Min; Wu, Junjun

2017-10-01

A kind of multi channel dual-core photonic crystal fiber polarization beam splitter is designed. We analyze the effects of the lattice parameters and the thickness of gold layer on the beam splitting by the finite element method. Numerical results show that the thickness of metal layer and the size of the air holes near the fiber cores are closely linked with the nature of the polarization beam splitter. We also obtain that extinction ratio can reach -73.87 dB at 1 . 55 μm wavelength and at 1 . 41 μm, 1 . 65 μm extinction ratio can reach 30.8978 dB and 31.1741 dB, respectively. The comparison of the effect on the characteristic of the photonic crystal fiber with coating no gold is also taken into account.

Tetrameric subunit structure of the native brain inwardly rectifying potassium channel Kir 2.2.

PubMed

Raab-Graham, K F; Vandenberg, C A

1998-07-31

Strongly inwardly rectifying potassium channels of the Kir 2 subfamily (IRK1, IRK2, and IRK3) are involved in maintenance and modulation of cell excitability in brain and heart. Electrophysiological studies of channels expressed in heterologous systems have suggested that the pore-conducting pathway contains four subunits. However, inferences from electrophysiological studies have not been tested on native channels and do not address the possibility of nonconducting auxiliary subunits. Here, we investigate the subunit stoichiometry of endogenous inwardly rectifying potassium channel Kir 2.2 (IRK2) from rat brain. Using chemical cross-linking, immunoprecipitiation, and velocity sedimentation, we report physical evidence demonstrating the tetrameric organization of the native channel. Kir 2.2 was sequentially cross-linked to produce bands on SDS-polyacrylamide gel electrophoresis corresponding in size to monomer, dimer, trimer, and three forms of tetramer. Fully cross-linked channel was present as a single band of tetrameric size. Immunoprecipitation of biotinylated membranes revealed a single band corresponding to Kir 2.2, suggesting that the channel is composed of a single type of subunit. Hydrodynamic properties of 3-[(3-cholamidopropyl)dimethylammonio]-1-propane sulfonic acid-solubilized channel were used to calculate the molecular mass of the channel. Velocity sedimentation in H2O or D2O gave a sharp peak with a sedimentation coefficient of 17.3 S. Gel filtration yielded a Stokes radius of 5.92 nm. These data indicate a multisubunit protein with a molecular mass of 193 kDa, calculated to contain 3.98 subunits. Together, these results demonstrate that Kir 2.2 channels are formed by the homotetrameric association of Kir 2.2 subunits and do not contain tightly associated auxiliary subunits. These studies suggest that Kir 2.2 channels differ in structure from related heterooctomeric ATP-sensitive K channels and heterotetrameric G-protein-regulated inward rectifier K channels.

Architecture and Channel-Belt Clustering in the Fluvial lower Wasatch Formation, Uinta Basin, Utah

NASA Astrophysics Data System (ADS)

Pisel, J. R.; Pyles, D. R.; Bracken, B.; Rosenbaum, C. D.

2013-12-01

The Eocene lower Wasatch Formation of the Uinta Basin contains exceptional outcrops of low net-sand content (27% sand) fluvial strata. This study quantitatively documents the stratigraphy of a 7 km wide by 300 meter thick strike-oriented outcrop in order to develop a quantitative data base that can be used to improve our knowledge of how some fluvial systems evolve over geologic time scales. Data used to document the outcrop are: (1) 550 meters of decimeter to half meter scale resolution stratigraphic columns that document grain size and physical sedimentary structures; (2) detailed photopanels used to document architectural style and lithofacies types in the outcrop; (3) thickness, width, and spatial position for all channel belts in the outcrop, and (4) directional measurements of paleocurrent indicators. Two channel-belt styles are recognized: lateral and downstream accreting channel belts; both of which occur as either single or multi-story. Floodplain strata are well exposed and consist of overbank fines and sand-rich crevasse splay deposits. Key upward and lateral characteristics of the outcrop documented herein are the following. First, the shapes of 243 channels are documented. The average width, thickness and aspect ratios of the channel belts are 110 m, 7 m, and 16:1, respectively. Importantly, the size and shape of channel belts does not change upward through the 300 meter transect. Second, channels are documented to spatially cluster. 9 clusters are documented using a spatial statistic. Key upward patterns in channel belt clustering are a marked change from non-amalgamated isolated channel-belt clusters to amalgamated channel-belt clusters. Critically, stratal surfaces can be correlated from mudstone units within the clusters to time-equivalent floodplain strata adjacent to the cluster demonstrating that clusters are not confined within fluvial valleys. Finally, proportions of floodplain and channel belt elements underlying clusters and channel belts vary with the style of clusters and channel belts laterally and vertically within the outcrop.

Potential for bed-material entrainment in selected streams of the Edwards Plateau - Edwards, Kimble, and Real Counties, Texas, and vicinity

USGS Publications Warehouse

Heitmuller, Franklin T.; Asquith, William H.

2008-01-01

The Texas Department of Transportation spends considerable money for maintenance and replacement of low-water crossings of streams in the Edwards Plateau in Central Texas as a result of damages caused in part by the transport of cobble- and gravel-sized bed material. An investigation of the problem at low-water crossings was made by the U.S. Geological Survey in cooperation with the Texas Department of Transportation, and in collaboration with Texas Tech University, Lamar University, and the University of Houston. The bed-material entrainment problem for low-water crossings occurs at two spatial scales - watershed scale and channel-reach scale. First, the relative abundance and activity of cobble- and gravel-sized bed material along a given channel reach becomes greater with increasingly steeper watershed slopes. Second, the stresses required to mobilize bed material at a location can be attributed to reach-scale hydraulic factors, including channel geometry and particle size. The frequency of entrainment generally increases with downstream distance, as a result of decreasing particle size and increased flood magnitudes. An average of 1 year occurs between flows that initially entrain bed material as large as the median particle size, and an average of 1.5 years occurs between flows that completely entrain bed material as large as the median particle size. The Froude numbers associated with initial and complete entrainment of bed material up to the median particle size approximately are 0.40 and 0.45, respectively.

Analytical Model of Advection and Erosion in a Rectangular Channel

NASA Astrophysics Data System (ADS)

Kaufman, Miron

2007-03-01

We consider the Boussinesq pressure driven creeping flow in a rectangular channel. We assume a particle to be made of primary fragments bound together. Particles are advected by the flow and they erode because of the shear stresses imparted by the fluid. The time evolution of the numbers of particles of different sizes is described by the Bateman equations of nuclear radioactivity. We find, by solving these differential equations, the numbers of particles of each possible size as functions of time.

On the delay analysis of a TDMA channel with finite buffer capacity

NASA Technical Reports Server (NTRS)

Yan, T.-Y.

1982-01-01

The throughput performance of a TDMA channel with finite buffer capacity for transmitting data messages is considered. Each station has limited message buffer capacity and has Poisson message arrivals. Message arrivals will be blocked if the buffers are congested. Using the embedded Markov chain model, the solution procedure for the limiting system-size probabilities is presented in a recursive fashion. Numerical examples are given to demonstrate the tradeoffs between the blocking probabilities and the buffer sizing strategy.

Channel microband electrode arrays for mechanistic electrochemistry. Two-dimensional voltammetry:  transport-limited currents.

PubMed

Alden, J A; Feldman, M A; Hill, E; Prieto, F; Oyama, M; Coles, B A; Compton, R G; Dobson, P J; Leigh, P A

1998-05-01

A channel electrode array, with electrodes ranging in size from the millimeter to the submicrometer scale, is used for the amperometric interrogation of mechanistically complex electrode processes. In this way, the transport-limited current, measured as a function of both electrode size and electrolyte flow rate (convection), is shown to provide a highly sensitive probe of mechanism and kinetics. The application of "two-dimensional voltammetry" to diverse electrode processes, including E, ECE, ECEE, EC', and DISP2 reactions, is reported.

The role of particle jamming on the formation and stability of step-pool morphology: insight from a reduced-complexity model

NASA Astrophysics Data System (ADS)

Saletti, M.; Molnar, P.; Hassan, M. A.

2017-12-01

Granular processes have been recognized as key drivers in earth surface dynamics, especially in steep landscapes because of the large size of sediment found in channels. In this work we focus on step-pool morphologies, studying the effect of particle jamming on step formation. Starting from the jammed-state hypothesis, we assume that grains generate steps because of particle jamming and those steps are inherently more stable because of additional force chains in the transversal direction. We test this hypothesis with a particle-based reduced-complexity model, CAST2, where sediment is organized in patches and entrainment, transport and deposition of grains depend on flow stage and local topography through simplified phenomenological rules. The model operates with 2 grain sizes: fine grains, that can be mobilized both my large and moderate flows, and coarse grains, mobile only during large floods. First, we identify the minimum set of processes necessary to generate and maintain steps in a numerical channel: (a) occurrence of floods, (b) particle jamming, (c) low sediment supply, and (d) presence of sediment with different entrainment probabilities. Numerical results are compared with field observations collected in different step-pool channels in terms of step density, a variable that captures the proportion of the channel occupied by steps. Not only the longitudinal profiles of numerical channels display step sequences similar to those observed in real step-pool streams, but also the values of step density are very similar when all the processes mentioned before are considered. Moreover, with CAST2 it is possible to run long simulations with repeated flood events, to test the effect of flood frequency on step formation. Numerical results indicate that larger step densities belong to system more frequently perturbed by floods, compared to system having a lower flood frequency. Our results highlight the important interactions between external hydrological forcing and internal geomorphic adjustment (e.g. jamming) on the response of step-pool streams, showing the potential of reduced-complexity models in fluvial geomorphology.

Moisture vapor transport channels for the improved attachment of a medical device to the human body.

PubMed

Cunningham, David D; Lowery, Michael G

2004-06-01

Attachment of a small, medical device to the human body for an extended period of time in an ambulatory setting requires the careful consideration of the physical form of the device and the physiological constraints limiting the time a device will stay on the skin. Factors such as the size of the device, the area of the device available for attachment to the skin, and the occlusive nature of the materials in the device are likely to affect adhesion. Here, plastic acrylic disks, 25 mm in diameter, containing a crisscross pattern of air-filled channels were tested on the forearm and abdomen using a moderately aggressive, unsupported, pressure-sensitive transfer adhesive in a pilot human clinical study. After vigorous exercise, droplets of moisture were observed in the channels followed by evaporation of the droplets over time. Disks without channels remained attached to the skin for about a day and a half, while disks containing 450 microm deep channels remained on the skin about three times longer. Little difference was found when the channel-to-channel spacing was increased from 1.3 to 1.6 mm, however 230 microm deep channels were less effective than 450 microm deep channels. Overall, the moisture vapor transport channels appear capable of reducing the moisture content of the outermost stratum corneum layer of the skin, increasing the strength of the stratum corneum, and increasing the time a device remains attached to the skin. The median trial-to-trial relative standard deviation of 45% observed in the pilot study can be used to design appropriately powered studies for the comparison of different device designs.

Sedimentary Facies Mapping Based on Tidal Channel Network and Topographic Features

NASA Astrophysics Data System (ADS)

Ryu, J. H.; Lee, Y. K.; Kim, K.; Kim, B.

2015-12-01

Tidal flats on the west coast of Korea suffer intensive changes in their surface sedimentary facies as a result of the influence of natural and artificial changes. Spatial relationships between surface sedimentary facies distribution and benthic environments were estimated for the open-type Ganghwa tidal flat and semi closed-type Hwangdo tidal flat, Korea. In this study, we standardized the surface sedimentary facies and tidal channel index of the channel density, distance, thickness and order. To extract tidal channel information, we used remotely sensed data, such as those from the Korea Multi-Purpose Satellite (KOMPSAT)-2, KOMPSAT-3, and aerial photographs. Surface sedimentary facies maps were generated based on field data using an interpolation method.The tidal channels in each sediment facies had relatively constant meandering patterns, but the density and complexity were distinguishable. The second fractal dimension was 1.7-1.8 in the mud flat, about 1.4 in the mixed flat, and about 1.3 in the sand flat. The channel density was 0.03-0.06 m/m2 in the mud flat and less than 0.02 m/m2 in the mixed and sand flat areas of the two test areas. Low values of the tidal channel index, which indicated a simple pattern of tidal channel distribution, were identified at areas having low elevation and coarse-grained sediments. By contrast, high values of the tidal channel index, which indicated a dendritic pattern of tidal channel distribution, were identified at areas having high elevation and fine-grained sediments. Surface sediment classification based on remotely sensed data must circumspectly consider an effective critical grain size, water content, local topography, and intertidal structures.

Association of ice and river channel morphology determined using ground-penetrationg radar in the Kuparuk River, Alaska

USGS Publications Warehouse

Best, Heather; McNamara, J.P.; Liberty, Lee M.

2005-01-01

We collected ground-penetrating radar data at 10 sites along the Kuparuk River and its main tributary, the Toolik River, to detect unfrozen water beneath river ice. We used 250 MHz and 500 MHz antennas to image both the ice-water interface and the river channel in late April 2001, when daily high temperatures were consistently freezing and river ice had attained its maximum seasonal thickness. The presence of water below the river ice appears as a strong, horizontal reflection observed in the radar data and is confirmed by drill hole data. A downstream transition occurs from ice that is frozen to the bed, called bedfast ice, to ice that is floating on unfrozen water, called floating ice. This transition in ice type corresponds to a downstream change in channel size that was detected in previously conducted hydraulic geometry surveys of the Kuparuk River. We propose a conceptual model wherein the downstream transition from bedfast ice to floating ice is responsible for an observed step change in channel size due to enhanced bank erosion in large channels by floating ice.

Role of mixed boundaries on flow in open capillary channels with curved air-water interfaces.

PubMed

Zheng, Wenjuan; Wang, Lian-Ping; Or, Dani; Lazouskaya, Volha; Jin, Yan

2012-09-04

Flow in unsaturated porous media or in engineered microfluidic systems is dominated by capillary and viscous forces. Consequently, flow regimes may differ markedly from conventional flows, reflecting strong interfacial influences on small bodies of flowing liquids. In this work, we visualized liquid transport patterns in open capillary channels with a range of opening sizes from 0.6 to 5.0 mm using laser scanning confocal microscopy combined with fluorescent latex particles (1.0 μm) as tracers at a mean velocity of ∼0.50 mm s(-1). The observed velocity profiles indicate limited mobility at the air-water interface. The application of the Stokes equation with mixed boundary conditions (i.e., no slip on the channel walls and partial slip or shear stress at the air-water interface) clearly illustrates the increasing importance of interfacial shear stress with decreasing channel size. Interfacial shear stress emerges from the velocity gradient from the adjoining no-slip walls to the center where flow is trapped in a region in which capillary forces dominate. In addition, the increased contribution of capillary forces (relative to viscous forces) to flow on the microscale leads to increased interfacial curvature, which, together with interfacial shear stress, affects the velocity distribution and flow pattern (e.g., reverse flow in the contact line region). We found that partial slip, rather than the commonly used stress-free condition, provided a more accurate description of the boundary condition at the confined air-water interface, reflecting the key role that surface/interface effects play in controlling flow behavior on the nanoscale and microscale.

Method of filling a microchannel separation column

DOEpatents

Arnold, Don W.

2002-01-01

A method for packing a stationary phase into a small diameter fluid passageway or flow channel. Capillary action is employed to distribute a stationary phase uniformly along both the length and diameter of the flow channel. The method disclosed here: 1) eliminates the need for high pressure pumps and fittings and the safety hazards associated therewith; 2) allows the use of readily available commercial microparticles, either coated or uncoated, as the stationary phase; 3) provides for different types of particles, different particle sizes, and different particle size distributions to be packed in sequence, or simultaneously; 4) eliminates the need for plugging the flow channel prior to adding the stationary phase to retain the packing particles; and 5) many capillaries can be filled simultaneously.

Complete energetic description of hydrokinetic turbine impact on flow channel dynamics

NASA Astrophysics Data System (ADS)

Brasseale, E.; Kawase, M.

2016-02-01

Energy budget analysis on tidal channels quantifies and demarcates the impacts of marine renewables on environmental fluid dynamics. Energy budget analysis assumes the change in total kinetic energy within a volume of fluid can be described by the work done by each force acting on the flow. In a numerically simulated channel, the balance between energy change and work done has been validated up to 5% error.The forces doing work on the flow include pressure, turbulent dissipation, and stress from the estuary floor. If hydrokinetic turbines are installed in an estuarine channel to convert tidal energy into usable power, the dynamics of the channel change. Turbines provide additional pressure work against the flow of the channel which will slow the current and lessen turbulent dissipation and bottom stress. These losses may negatively impact estuarine circulation, seafloor scour, and stratification.The environmental effects of turbine deployment have been quantified using a three dimensional, Reynolds-averaged, Navier-Stokes model of an idealized flow channel situated between the ocean and a large estuarine basin. The channel is five kilometers wide, twenty kilometers long and fifty meters deep, and resolved to a grid size of 10 meters by 10 meters by 1 meter. Tidal currents are simulated by an initial difference in sea surface height across the channel of 160 centimeters from the channel entrance to the channel exit. This creates a pressure gradient which drives flow through the channel. Tidal power turbines are represented as disks that force the channel in proportion to the strength of the current. Three tidal turbines twenty meters in diameters have been included in the model to simulate the impacts of a pilot scale test deployment.This study is the first to appreciate the energetic impact of marine renewables in a three dimensional model through the energy equation's constituent terms. This study provides groundwork for understanding and predicting the environmental impacts of marine renewables.

Maintenance of an obstruction-forced pool in a gravel-bed channel: streamflow, channel morphology, and sediment transport.

Treesearch

Richard D. Woodsmith; Marwan A. Hassan

2005-01-01

Maintenance of pool morphology in a stream channel with a mobile bed requires hydraulic conditions at moderate to high flows that route bed load through the pool as it is delivered from upstream. Through field measurements of discharge, vertical velocity profiles, bed load transport, and streambed scour, fill, and grain-size distribution, we found that maintenance of a...

The spatial arrangement of neritina virginea (gastropoda: neritidae) during upstream migration in a split-channel reach.

Treesearch

JUAN F. BLANCO; FREDERICK N. SCATENA

2007-01-01

This paper relates differences in flow hydraulics between a main channel (MC) and a side channel (SC) of a river to patterns of upstream migration by Neritina virginea (Neritidae: Gastropoda), a dominant diadromous snail in streams of Puerto Rico (Greater Antilles). Near-bed water velocity, snail density and shell size were measured on a weekly basis between August and...

Fine-grained bed patch response to near-bankfull flows in a step-pool channel

Treesearch

Daniel A. Marion; Frank Weirich

1999-01-01

Fine-grained bed patches were monitored in a representative step-pool channel in the Arkansas Ouachita Mountains to assess their response to near-bankfull streamflow events. These patches are small, relatively well-sorted bed areas predominantly composed of gravel-size and smaller grains. They occupy 5.2 and 4.1 percent of the active and bankfull channel areas,...

Catalyst Complexed Carbon Slurry Fuel Development.

DTIC Science & Technology

1981-01-01

materials of fine particle size made by procedures denoted as furnace, channel , thermal, and lamp. Car- bon black materials are composed essentially of...far the largest group of commercially available materials, and are prepared by partial combustion of heavy hydrocarbon liquids. Channel blacks are...manufactured by impingement of natural gas flames on cold channel irons. Thermal blacks are produced by thermal decomposition of natural gas, while

Does boat traffic cause displacement of fish in estuaries?

PubMed

Becker, Alistair; Whitfield, Alan K; Cowley, Paul D; Järnegren, Johanna; Næsje, Tor F

2013-10-15

Estuaries are increasingly under threat from a variety of human impacts. Recreational and commercial boat traffic in urban areas may represent a significant disturbance to fish populations and have particularly adverse effects in spatially restricted systems such as estuaries. We examined the effects of passing boats on the abundance of different sized fish within the main navigation channel of an estuary using high resolution sonar (DIDSON). Both the smallest (100-300 mm) and largest (>501 mm) size classes had no change in their abundance following the passage of boats. However, a decrease in abundance of mid-sized fish (301-500 mm) occurred following the passage of boats. This displacement may be attributed to a number of factors including noise, bubbles and the rapidly approaching object of the boat itself. In highly urbanised estuarine systems, regular displacement by boat traffic has the potential to have major negative population level effects on fish assemblages. Copyright © 2013 Elsevier Ltd. All rights reserved.

Progress on a high current density low cost Niobium3Tin conductor scaleable to modern niobium titanium production

NASA Astrophysics Data System (ADS)

Zeitlin, Bruce A.; Pyon, Taeyoung; Gregory, Eric; Scanlan, R. M.

2002-05-01

A number of configurations of a mono element internal tin conductor (MEIT) were fabricated designed to explore the effect of local ratio, niobium content, and tin content on the overall current density. Critical current densities on four configurations were measured, two to 17T. Current density as a function of filament size was also measured with filaments sizes ranging from 1.8 to 7.1 microns. A Nb60wt%Ta barrier was also explored as a means to reduce the high cost of the Tantalum barrier. The effectiveness of radial copper channels in high Nb conductors is also evaluated. Results are used to suggest designs for more optimized conductors.

Evolving regulatory paradigm for proarrhythmic risk assessment for new drugs.

PubMed

Vicente, Jose; Stockbridge, Norman; Strauss, David G

Fourteen drugs were removed from the market worldwide because their potential to cause torsade de pointes (torsade), a potentially fatal ventricular arrhythmia. The observation that most drugs that cause torsade block the potassium channel encoded by the human ether-à-go-go related gene (hERG) and prolong the heart rate corrected QT interval (QTc) on the ECG, led to a focus on screening new drugs for their potential to block the hERG potassium channel and prolong QTc. This has been a successful strategy keeping torsadogenic drugs off the market, but has resulted in drugs being dropped from development, sometimes inappropriately. This is because not all drugs that block the hERG potassium channel and prolong QTc cause torsade, sometimes because they block other channels. The regulatory paradigm is evolving to improve proarrhythmic risk prediction. ECG studies can now use exposure-response modeling for assessing the effect of a drug on the QTc in small sample size first-in-human studies. Furthermore, the Comprehensive in vitro Proarrhythmia Assay (CiPA) initiative is developing and validating a new in vitro paradigm for cardiac safety evaluation of new drugs that provides a more accurate and comprehensive mechanistic-based assessment of proarrhythmic potential. Under CiPA, the prediction of proarrhythmic potential will come from in vitro ion channel assessments coupled with an in silico model of the human ventricular myocyte. The preclinical assessment will be checked with an assessment of human phase 1 ECG data to determine if there are unexpected ion channel effects in humans compared to preclinical ion channel data. While there is ongoing validation work, the heart rate corrected J-T peak interval is likely to be assessed under CiPA to detect inward current block in presence of hERG potassium channel block. Copyright © 2016 Elsevier Inc. All rights reserved.

Label-free viscosity measurement of complex fluids using reversal flow switching manipulation in a microfluidic channel

PubMed Central

Jun Kang, Yang; Ryu, Jeongeun; Lee, Sang-Joon

2013-01-01

The accurate viscosity measurement of complex fluids is essential for characterizing fluidic behaviors in blood vessels and in microfluidic channels of lab-on-a-chip devices. A microfluidic platform that accurately identifies biophysical properties of blood can be used as a promising tool for the early detections of cardiovascular and microcirculation diseases. In this study, a flow-switching phenomenon depending on hydrodynamic balancing in a microfluidic channel was adopted to conduct viscosity measurement of complex fluids with label-free operation. A microfluidic device for demonstrating this proposed method was designed to have two inlets for supplying the test and reference fluids, two side channels in parallel, and a junction channel connected to the midpoint of the two side channels. According to this proposed method, viscosities of various fluids with different phases (aqueous, oil, and blood) in relation to that of reference fluid were accurately determined by measuring the switching flow-rate ratio between the test and reference fluids, when a reverse flow of the test or reference fluid occurs in the junction channel. An analytical viscosity formula was derived to measure the viscosity of a test fluid in relation to that of the corresponding reference fluid using a discrete circuit model for the microfluidic device. The experimental analysis for evaluating the effects of various parameters on the performance of the proposed method revealed that the fluidic resistance ratio (RJL/RL, fluidic resistance in the junction channel (RJL) to fluidic resistance in the side channel (RL)) strongly affects the measurement accuracy. The microfluidic device with smaller RJL/RL values is helpful to measure accurately the viscosity of the test fluid. The proposed method accurately measured the viscosities of various fluids, including single-phase (Glycerin and plasma) and oil-water phase (oil vs. deionized water) fluids, compared with conventional methods. The proposed method was also successfully applied to measure viscosities of blood with varying hematocrits, chemically fixed RBCS, and channel sizes. Based on these experimental results, the proposed method can be effectively used to measure the viscosities of various fluids easily, without any fluorescent labeling and tedious calibration procedures. PMID:24404040

Stimulus and optode placement effects on functional near-infrared spectroscopy of visual cortex

PubMed Central

Kashou, Nasser H.; Giacherio, Brenna M.

2016-01-01

Abstract. Functional near-infrared spectroscopy has yet to be implemented as a stand-alone technique within an ophthalmology clinical setting, despite its promising advantages. The present study aims to further investigate reliability of visual cortical signals. This was achieved by: (1) assessing the effects of optode placements using the 10–20 International System of Electrode Placement consisting of 28 channels, (2) determining effects of stimulus size on response, and (3) evaluating response variability as a result of cap placement across three sessions. Ten participants with mean age 23.8±4.8 years (five male) and varying types of hair color and thickness were recruited. Visual stimuli of black-and-white checkerboards, reversing at a frequency of 7.5 Hz were presented. Visual angles of individual checker squares included 1 deg, 2 deg, 5 deg, 9 deg, and 18 deg. The number of channels that showed response was analyzed for each participant, stimulus size, and session. 1-deg stimulus showed the greatest activation. One of three data collection sessions for each participant gave different results (p<0.05). Hair color and thickness each had an effect upon the overall HbO (p<0.05), while only color had a significant effect for HbD (p<0.05). A reliable level of robustness and consistency is still required for clinical implementation and assessment of visual dysfunction. PMID:27335887

Effect of Lipid-Based Nanostructure on Protein Encapsulation within the Membrane Bilayer Mimetic Lipidic Cubic Phase Using Transmembrane and Lipo-proteins from the Beta-Barrel Assembly Machinery.

PubMed

van 't Hag, Leonie; Shen, Hsin-Hui; Lin, Tsung-Wu; Gras, Sally L; Drummond, Calum J; Conn, Charlotte E

2016-11-29

A fundamental understanding of the effect of amphiphilic protein encapsulation on the nanostructure of the bicontinuous cubic phase is crucial to progressing biomedical and biological applications of these hybrid protein-lipid materials, including as drug delivery vehicles, as biosensors, biofuel cells and for in meso crystallization. The relationship between the lipid nanomaterial and the encapsulated protein, however, remains poorly understood. In this study, we investigated the effect of incorporating the five transmembrane and lipo-proteins which make up the β-barrel assembly machinery from Gram-negative bacteria within a series of bicontinuous cubic phases. The transmembrane β-barrel BamA caused an increase in lattice parameter of the cubic phase upon encapsulation. By contrast, the mainly hydrophilic lipo-proteins BamB-E caused the cubic phase lattice parameters to decrease, despite their large size relative to the diameter of the cubic phase water channels. Analysis of the primary amino acid sequence was used to rationalize this effect, based on specific interactions between aromatic amino acids within the proteins and the polar-apolar interface. Other factors that were found to have an effect were lateral bilayer pressure and rigidity within the lipid bilayer, water channel diameter, and size and structure of the lipo-proteins. The data presented suggest that hydrophilic bioactive molecules can be selectively encapsulated within the cubic phase by using a lipid anchor or aromatic amino acids, for drug delivery or biosensing applications.

MapX: 2D XRF for Planetary Exploration - Image Formation and Optic Characterization

DOE PAGES

Sarrazin, P.; Blake, D.; Gailhanou, M.; ...

2018-04-01

Map-X is a planetary instrument concept for 2D X-Ray Fluorescence (XRF) spectroscopy. The instrument is placed directly on the surface of an object and held in a fixed position during the measurement. The formation of XRF images on the CCD detector relies on a multichannel optic configured for 1:1 imaging and can be analyzed through the point spread function (PSF) of the optic. The PSF can be directly measured using a micron-sized monochromatic X-ray source in place of the sample. Such PSF measurements were carried out at the Stanford Synchrotron and are compared with ray tracing simulations. It is shownmore » that artifacts are introduced by the periodicity of the PSF at the channel scale and the proximity of the CCD pixel size and the optic channel size. A strategy of sub-channel random moves was used to cancel out these artifacts and provide a clean experimental PSF directly usable for XRF image deconvolution.« less

MapX: 2D XRF for Planetary Exploration - Image Formation and Optic Characterization

NASA Astrophysics Data System (ADS)

Sarrazin, P.; Blake, D.; Gailhanou, M.; Marchis, F.; Chalumeau, C.; Webb, S.; Walter, P.; Schyns, E.; Thompson, K.; Bristow, T.

2018-04-01

Map-X is a planetary instrument concept for 2D X-Ray Fluorescence (XRF) spectroscopy. The instrument is placed directly on the surface of an object and held in a fixed position during the measurement. The formation of XRF images on the CCD detector relies on a multichannel optic configured for 1:1 imaging and can be analyzed through the point spread function (PSF) of the optic. The PSF can be directly measured using a micron-sized monochromatic X-ray source in place of the sample. Such PSF measurements were carried out at the Stanford Synchrotron and are compared with ray tracing simulations. It is shown that artifacts are introduced by the periodicity of the PSF at the channel scale and the proximity of the CCD pixel size and the optic channel size. A strategy of sub-channel random moves was used to cancel out these artifacts and provide a clean experimental PSF directly usable for XRF image deconvolution.

MapX: 2D XRF for Planetary Exploration - Image Formation and Optic Characterization

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sarrazin, P.; Blake, D.; Gailhanou, M.

Map-X is a planetary instrument concept for 2D X-Ray Fluorescence (XRF) spectroscopy. The instrument is placed directly on the surface of an object and held in a fixed position during the measurement. The formation of XRF images on the CCD detector relies on a multichannel optic configured for 1:1 imaging and can be analyzed through the point spread function (PSF) of the optic. The PSF can be directly measured using a micron-sized monochromatic X-ray source in place of the sample. Such PSF measurements were carried out at the Stanford Synchrotron and are compared with ray tracing simulations. It is shownmore » that artifacts are introduced by the periodicity of the PSF at the channel scale and the proximity of the CCD pixel size and the optic channel size. A strategy of sub-channel random moves was used to cancel out these artifacts and provide a clean experimental PSF directly usable for XRF image deconvolution.« less

Acoustic measurement of bubble size and position in a piezo driven inkjet printhead

NASA Astrophysics Data System (ADS)

van der Bos, Arjan; Jeurissen, Roger; de Jong, Jos; Stevens, Richard; Versluis, Michel; Reinten, Hans; van den Berg, Marc; Wijshoff, Herman; Lohse, Detlef

2008-11-01

A bubble can be entrained in the ink channel of a piezo-driven inkjet printhead, where it grows by rectified diffusion. If large enough, the bubble counteracts the pressure buildup at the nozzle, resulting in nozzle failure. Here an acoustic sizing method for the volume and position of the bubble is presented. The bubble response is detected by the piezo actuator itself, operating in a sensor mode. The method used to determine the volume and position of the bubble is based on a linear model in which the interaction between the bubble and the channel are included. This model predicts the acoustic signal for a given position and volume of the bubble. The inverse problem is to infer the position and volume of the bubble from the measured acoustic signal. By solving it, we can thus acoustically measure size and position of the bubble. The validity of the presented method is supported by time-resolved optical observations of the dynamics of the bubble within an optically accessible ink-jet channel.

Update on Regulation of Sand Transport in the Colorado River by Changes in the Surface Grain Size of Eddy Sandbars over Multiyear Timescales

USGS Publications Warehouse

Topping, David J.; Rubin, David M.; Schmidt, John C.

2008-01-01

In settings where the transport of sand is partially or fully supply limited, changes in the upstream supply of sand are coupled to changes in the grain size of sand on the bed. In this manner, the transport of sand under the supply-limited case is ?grain-size regulated.? Since the closure of Glen Canyon Dam in 1963, the downstream reach of the Colorado River in Marble and Grand Canyons has exhibited evidence of sand-supply limitation. Sand transport in the river is now about equally regulated by changes in the discharge of water and changes in the grain sizes of sand on the channel bed and eddy sandbars. Previous work has shown that changes in the grain size of sand on the channel bed (driven by changes in the upstream supply of sand owing to both tributary floods and high dam releases) are important in regulating sand transport over timescales of days to months. In this study, suspended-sand data are analyzed in conjunction with bed grain-size data to determine whether changes in the sand grain size on the channel bed, or changes in the sand grain size on the surface of eddy sandbars, have been more important in regulating sand transport in the postdam Colorado River over longer, multiyear timescales. The results of this study show that this combined theory- and field-based approach can be used to deduce which environments in a complicated setting are most important for regulating sediment transport. In the case of the regulated Colorado River in Marble and upper Grand Canyons, suspended-sand transport has been regulated mostly by changes in the surface grain size of eddy sandbars.

Assessing the concept of structure sensitivity or insensitivity for sub-nanometer catalyst materials

NASA Astrophysics Data System (ADS)

Crampton, Andrew S.; Rötzer, Marian D.; Ridge, Claron J.; Yoon, Bokwon; Schweinberger, Florian F.; Landman, Uzi; Heiz, Ueli

2016-10-01

The nature of the nano-catalyzed hydrogenation of ethylene, yielding benchmark information pertaining to the concept of structure sensitivity/insensitivity and its applicability at the bottom of the catalyst particle size-range, is explored with experiments on size-selected Ptn (n = 7-40) clusters soft-landed on MgO, in conjunction with first-principles simulations. As in the case of larger particles both the direct ethylene hydrogenation channel and the parallel hydrogenation-dehydrogenation ethylidyne-producing route must be considered, with the fundamental uncovering that at the < 1 nm size-scale the reaction exhibits characteristics consistent with structure sensitivity, in contrast to the structure insensitivity found for larger particles. In this size-regime, the chemical properties can be modulated and tuned by a single atom, reflected by the onset of low temperature hydrogenation at T > 150 K catalyzed by Ptn (n ≥ 10) clusters, with maximum room temperature reactivity observed for Pt13 using a pulsed molecular beam technique. Structure insensitive behavior, inherent for specific cluster sizes at ambient temperatures, can be induced in the more active sizes, e.g. Pt13, by a temperature increase, up to 400 K, which opens dehydrogenation channels leading to ethylidyne formation. This reaction channel was, however found to be attenuated on Pt20, as catalyst activity remained elevated after the 400 K step. Pt30 displayed behavior which can be understood from extrapolating bulk properties to this size range; in particular the calculated d-band center. In the non-scalable sub-nanometer size regime, however, precise control of particle size may be used for atom-by-atom tuning and manipulation of catalyzed hydrogenation activity and selectivity.

Determination of the manning coefficient from measured bed roughness in natural channels

USGS Publications Warehouse

Limerinos, John Thomas

1970-01-01

This report presents the results of a study to test the hypothesis that basic values of the Manning roughness coefficient of stream channels may be related to (1) some characteristic size of the streambed particles and to (2) the distribution of particle size. These two elements involving particle size can be combined into a single element by weighting characteristic particle sizes. The investigation was confined to channels with coarse bed material to avoid the complication of bed-form roughness that is associated with alluvial channels composed of fine bed material. Fifty current-meter measurements of discharge and appropriate field surveys were made at 11 sites on California streams for the purpose of computing the roughness coefficient, n, by the Manning formula. The test sites were selected to give a wide range in average size of bed material, and the discharge measurements and surveys were made at such times as to provide data covering a suitable range in stream depth. The sites selected were relatively free of the extraneous flow-retarding effects associated with irregular channel conformation and streambank vegetation. The characteristic bed-particle sizes used in the analyses were the 16,- 50,- and 84-percentile sizes as obtained from a cumulative frequency distribution of the diameters of randomly sampled surficial bed material. Separate distributions were computed for the minimum and intermediate values of the three diameters of a particle. The minimum diameters of the streambed particles were used in the study because a particle at rest on the bed invariably has its minimum diameter in the vertical position; this diameter is, therefore, the most representative measure of roughness height. The intermediate diameter was also studied because this is the diameter most easily measurable-either by sieve analysis or by photographic techniques--and--because it is the diameter that had been used in previous studies by other investigators. No significant difference in reliability was found between the results obtained using minimum diameters and those obtained using intermediate diameters. In analyzing the field data, the roughness parameter, n/R1/6 (where R is hydraulic radius), was related to relative smoothness, R/d (where d is a characteristic, or weighted characteristic, particle size). The parameter n/R1/6, rather than n, was used because it is directly proportional to the square root of the Darcy-Weisbach friction factor, f, which is more widely used in theoretical studies of hydraulic friction. If the transformation of n/R1/6 to vf is made, the relations obtained in this study are of a form that is identical with that of the theoretical friction equation obtained by several investigators and that derived from field data by Leopold and Wolman (1957). The constants in the equation vary, of course, with the characteristic particle size used. The relations best fitting the field data for this study were obtained by using either a characteristic particle diameter equal to the 84-percentile size (d84, the size equal to, or exceeding, that of 84 percent of the streambed particles), or a diameter obtained by weighting three characteristic particle sizes (dw, the size obtained by assigning a weight of 0.1 to d16 , a weight of 0.3 to d50 , and a weight of 0.6 to d84). The use of d84 alone gave slightly better results than the use of dw, and, in addition, the use of d84 alone is attractive from a standpoint of simplicity. It is difficult, however, to rationalize the use of d84 alone because of the implication that the distribution of sizes is irrelevant, and it matters not at all whether 84 percent of the bed material is sand or whether it is large cobbles, as long as 16 percent of the material is of greater size. Consequently, the author recommends the use of dw rather than d84 , although there was no unanimity of opinion on this recommendation among his colleagues who reviewed this paper. The reader is free to

Development of a high-performance boiling heat exchanger by improved liquid supply to narrow channels.

PubMed

Ohta, Haruhiko; Ohno, Toshiyuki; Hioki, Fumiaki; Shinmoto, Yasuhisa

2004-11-01

A two-phase flow loop is a promising method for application to thermal management systems for large-scale space platforms handling large amounts of energy. Boiling heat transfer reduces the size and weight of cold plates. The transportation of latent heat reduces the mass flow rate of working fluid and pump power. To develop compact heat exchangers for the removal of waste heat from electronic devices with high heat generation density, experiments on a method to increase the critical heat flux for a narrow heated channel between parallel heated and unheated plates were conducted. Fine grooves are machined on the heating surface in a transverse direction to the flow and liquid is supplied underneath flattened bubbles by the capillary pressure difference from auxiliary liquid channels separated by porous metal plates from the main heated channel. The critical heat flux values for the present heated channel structure are more than twice those for a flat surface at gap sizes 2 mm and 0.7 mm. The validity of the present structure with auxiliary liquid channels is confirmed by experiments in which the liquid supply to the grooves is interrupted. The increment in the critical heat flux compared to those for a flat surface takes a maximum value at a certain flow rate of liquid supply to the heated channel. The increment is expected to become larger when the length of the heated channel is increased and/or the gravity level is reduced.

The preference of tryptophan for membrane interfaces: insights from N-methylation of tryptophans in gramicidin channels.

PubMed

Sun, Haiyan; Greathouse, Denise V; Andersen, Olaf S; Koeppe, Roger E

2008-08-08

To better understand the structural and functional roles of tryptophan at the membrane/water interface in membrane proteins, we examined the structural and functional consequences of Trp --> 1-methyl-tryptophan substitutions in membrane-spanning gramicidin A channels. Gramicidin A channels are miniproteins that are anchored to the interface by four Trps near the C terminus of each subunit in a membrane-spanning dimer. We masked the hydrogen bonding ability of individual or multiple Trps by 1-methylation of the indole ring and examined the structural and functional changes using circular dichroism spectroscopy, size exclusion chromatography, solid state (2)H NMR spectroscopy, and single channel analysis. N-Methylation causes distinct changes in the subunit conformational preference, channel-forming propensity, single channel conductance and lifetime, and average indole ring orientations within the membrane-spanning channels. The extent of the local ring dynamic wobble does not increase, and may decrease slightly, when the indole NH is replaced by the non-hydrogen-bonding and more bulky and hydrophobic N-CH(3) group. The changes in conformational preference, which are associated with a shift in the distribution of the aromatic residues across the bilayer, are similar to those observed previously with Trp --> Phe substitutions. We conclude that indole N-H hydrogen bonding is of major importance for the folding of gramicidin channels. The changes in ion permeability, however, are quite different for Trp --> Phe and Trp --> 1-methyl-tryptophan substitutions, indicating that the indole dipole moment and perhaps also ring size and are important for ion permeation through these channels.

Review: The state-of-art of sparse channel models and their applicability to performance assessment of radioactive waste repositories in fractured crystalline formations

NASA Astrophysics Data System (ADS)

Figueiredo, Bruno; Tsang, Chin-Fu; Niemi, Auli; Lindgren, Georg

2016-11-01

Laboratory and field experiments done on fractured rock show that flow and solute transport often occur along flow channels. `Sparse channels' refers to the case where these channels are characterised by flow in long flow paths separated from each other by large spacings relative to the size of flow domain. A literature study is presented that brings together information useful to assess whether a sparse-channel network concept is an appropriate representation of the flow system in tight fractured rock of low transmissivity, such as that around a nuclear waste repository in deep crystalline rocks. A number of observations are made in this review. First, conventional fracture network models may lead to inaccurate results for flow and solute transport in tight fractured rocks. Secondly, a flow dimension of 1, as determined by the analysis of pressure data in well testing, may be indicative of channelised flow, but such interpretation is not unique or definitive. Thirdly, in sparse channels, the percolation may be more influenced by the fracture shape than the fracture size and orientation but further studies are needed. Fourthly, the migration of radionuclides from a waste canister in a repository to the biosphere may be strongly influenced by the type of model used (e.g. discrete fracture network, channel model). Fifthly, the determination of appropriateness of representing an in situ flow system by a sparse-channel network model needs parameters usually neglected in site characterisation, such as the density of channels or fracture intersections.

Channeling of multikilojoule high-intensity laser beams in an inhomogeneous plasma

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ivancic, S.; Haberberger, D.; Habara, H.

Channeling experiments were performed that demonstrate the transport of high-intensity (>10¹⁸ W/cm²), multikilojoule laser light through a millimeter-sized, inhomogeneous (~300-μm density scale length) laser produced plasma up to overcritical density, which is an important step forward for the fast-ignition concept. The background plasma density and the density depression inside the channel were characterized with a novel optical probe system. The channel progression velocity was measured, which agrees well with theoretical predictions based on large scale particle-in-cell simulations, confirming scaling laws for the required channeling laser energy and laser pulse duration, which are important parameters for future integrated fast-ignition channeling experiments.

Clock and trigger synchronization between several chassis of digital data acquisition modules

NASA Astrophysics Data System (ADS)

Hennig, W.; Tan, H.; Walby, M.; Grudberg, P.; Fallu-Labruyere, A.; Warburton, W. K.; Vaman, C.; Starosta, K.; Miller, D.

2007-08-01

In applications with segmented high purity Ge detectors or other detector arrays with tens or hundreds of channels, the high development cost and limited flexibility of application specific integrated circuits outweigh their benefits of low power and small size. The readout electronics typically consist of multi-channel data acquisition modules in a common chassis for power, clock and trigger distribution, and data readout. As arrays become larger and reach several hundred channels, the readout electronics have to be divided over several chassis, but still must maintain precise synchronization of clocks and trigger signals across all channels. This division becomes necessary not only because of limits given by the instrumentation standards on module size and chassis slot numbers, but also because data readout times increase when more modules share the same data bus and because power requirements approach the limits of readily available power supplies. In this paper, we present a method for distributing clocks and triggers between 4 PXI chassis containing DGF Pixie-16 modules with up to 226 acquisition channels per chassis. The data acquisition system is intended to instrument the over 600 channels of the SeGA detector array at the National Superconducting Cyclotron Laboratory. Our solution is designed to achieve synchronous acquisition of detector waveforms from all channels with a jitter of less than 1 ns, and can be extended to a larger number of chassis if desired.

Investigating spatial variability of vertical water fluxes through the streambed in distinctive stream morphologies using temperature and head data

NASA Astrophysics Data System (ADS)

Wang, Liping; Jiang, Weiwei; Song, Jinxi; Dou, Xinyi; Guo, Hongtao; Xu, Shaofeng; Zhang, Guotao; Wen, Ming; Long, Yongqing; Li, Qi

2017-08-01

Investigating the interaction of groundwater and surface water is key to understanding the hyporheic processes. The vertical water fluxes through a streambed were determined using Darcian flux calculations and vertical sediment temperature profiles to assess the pattern and magnitude of groundwater/surface-water interaction in Beiluo River, China. Field measurements were taken in January 2015 at three different stream morphologies including a meander bend, an anabranching channel and a straight stream channel. Despite the differences of flux direction and magnitude, flux directions based on vertical temperature profiles are in good agreement with results from Darcian flux calculations at the anabranching channel, and the Kruskal-Wallis tests show no significant differences between the estimated upward fluxes based on the two methods at each site. Also, the upward fluxes based on the two methods show similar spatial distributions on the streambed, indicating (1) that higher water fluxes at the meander bend occur from the center of the channel towards the erosional bank, (2) that water fluxes at the anabranching channel are higher near the erosional bank and in the center of the channel, and (3) that in the straight channel, higher water fluxes appear from the center of the channel towards the depositional bank. It is noted that higher fluxes generally occur at certain locations with higher streambed vertical hydraulic conductivity ( K v) or where a higher vertical hydraulic gradient is observed. Moreover, differences of grain size, induced by stream morphology and contrasting erosional and depositional conditions, have significant effects on streambed K v and water fluxes.

Finding of widespread viral and bacterial revolution dsDNA translocation motors distinct from rotation motors by channel chirality and size

PubMed Central

2014-01-01

Background Double-stranded DNA translocation is ubiquitous in living systems. Cell mitosis, bacterial binary fission, DNA replication or repair, homologous recombination, Holliday junction resolution, viral genome packaging and cell entry all involve biomotor-driven dsDNA translocation. Previously, biomotors have been primarily classified into linear and rotational motors. We recently discovered a third class of dsDNA translocation motors in Phi29 utilizing revolution mechanism without rotation. Analogically, the Earth rotates around its own axis every 24 hours, but revolves around the Sun every 365 days. Results Single-channel DNA translocation conductance assay combined with structure inspections of motor channels on bacteriophages P22, SPP1, HK97, T7, T4, Phi29, and other dsDNA translocation motors such as bacterial FtsK and eukaryotic mimiviruses or vaccinia viruses showed that revolution motor is widespread. The force generation mechanism for revolution motors is elucidated. Revolution motors can be differentiated from rotation motors by their channel size and chirality. Crystal structure inspection revealed that revolution motors commonly exhibit channel diameters larger than 3 nm, while rotation motors that rotate around one of the two separated DNA strands feature a diameter smaller than 2 nm. Phi29 revolution motor translocated double- and tetra-stranded DNA that occupied 32% and 64% of the narrowest channel cross-section, respectively, evidencing that revolution motors exhibit channel diameters significantly wider than the dsDNA. Left-handed oriented channels found in revolution motors drive the right-handed dsDNA via anti-chiral interaction, while right-handed channels observed in rotation motors drive the right-handed dsDNA via parallel threads. Tethering both the motor and the dsDNA distal-end of the revolution motor does not block DNA packaging, indicating that no rotation is required for motors of dsDNA phages, while a small-angle left-handed twist of dsDNA that is aligned with the channel could occur due to the conformational change of the phage motor channels from a left-handed configuration for DNA entry to a right-handed configuration for DNA ejection for host cell infection. Conclusions The revolution motor is widespread among biological systems, and can be distinguished from rotation motors by channel size and chirality. The revolution mechanism renders dsDNA void of coiling and torque during translocation of the lengthy helical chromosome, thus resulting in more efficient motor energy conversion. PMID:24940480

Can coarse surface layers in gravel-bedded rivers be mobilized by finer gravel bedload?

NASA Astrophysics Data System (ADS)

Venditti, J. G.; Dietrich, W. E.; Nelson, P. A.; Wydzga, M. A.; Fadde, J.; Sklar, L.

2005-12-01

In response to reductions in sediment supply, gravel-bed rivers undergo a coarsening of the sediments that comprise the river's bed and, over some longer time scale, a river's grade may also be reduced as sediments are depleted from upstream reaches. Coarse, degraded river reaches are commonly observed downstream of dams across the Western United States. Following dam closure, these riverbeds become immobile under the altered flow and sediment supply regimes, leading to a reduction in the available salmon spawning and rearing habitat. Gravel augmentation to these streams is now common practice. This augmentation is typically seen as resurfacing the static coarse bed. As an alternative, we propose that the addition of appropriately finer gravels to these channels may be capable of mobilizing an otherwise immobile coarse surface layer, creating the potential to release fine material trapped beneath the surface. A series of laboratory experiments are being undertaken to test this hypothesis in a 30 m long and 0.86 m wide gravel-bedded flume channel using a constant discharge and a unimodal bed sediment with a median grain size of 8 mm and no sand present. The channel width-to-depth ratio of ~4 suppresses the development of lateral topography and allows us to focus on grain-to-grain interactions. Experiments proceed by maintaining a constant sediment feed until an equilibrium grade and transport rate are established, starving the flume of sediment for at least 24 hours, and then adding narrowly graded gravel over a period of one to two hours at a rate that is ~4x the bedload rate observed prior to terminating the sediment supply. The bed prior to sediment addition has an armor median grain size that is typically twice that of the subsurface and feed size distribution. The volume and median grain size of the resulting pulses are varied. Pulses move downstream rapidly with well-defined fronts in the form of bedload sheets and cause peaks in the sediment flux approximately equal to the supply rate. Once the pulse has passed through the flume, bedload flux rapidly drops to background values, leaving few introduced grains on the bed. When the sediment feed is the median grain size of the subsurface bed material mixture, few armor grains are mobilized, although there is some exchange between the surface and bedload. Pulses composed of the fine tail of the surface grain size distribution are capable of mobilizing all grain sizes in the armor (including the largest grains) as finer bedload fills the interstices of the coarse surface layer. This suggests that gravel augmentation using fine gravel may provide an effective means of improving bed mobility conditions. Further experiments are underway to explore the effects of repeated fine gravel addition on bed state.

Review of the effects of in-stream pipeline crossing construction on aquatic ecosystems and examination of Canadian methodologies for impact assessment.

PubMed

Lévesque, Lucie M; Dubé, Monique G

2007-09-01

Pipeline crossing construction alters river and stream channels, hence may have detrimental effects on aquatic ecosystems. This review examines the effects of crossing construction on fish and fish habitat in rivers and streams, and recommends an approach to monitoring and assessment of impacts associated with these activities. Pipeline crossing construction is shown to not only compromise the integrity of the physical and chemical nature of fish habitat, but also to affect biological habitat (e.g., benthic invertebrates and invertebrate drift), and fish behavior and physiology. Indicators of effect include: water quality (total suspended solids TSS), physical habitat (substrate particle size, channel morphology), benthic invertebrate community structure and drift (abundance, species composition, diversity, standing crop), and fish behavior and physiology (hierarchy, feeding, respiration rate, loss of equilibrium, blood hematocrit and leukocrit levels, heart rate and stroke volume). The Before-After-Control-Impact (BACI) approach, which is often applied in Environmental Effects Monitoring (EEM), is recommended as a basis for impact assessment, as is consideration of site-specific sensitivities, assessment of significance, and cumulative effects.

Local anesthetic-induced inhibition of human neutrophil priming: the influence of structure, lipophilicity, and charge.

PubMed

Picardi, Susanne; Cartellieri, Sibylle; Groves, Danja; Hahnenkamp, Klaus; Hahnenekamp, Klaus; Gerner, Peter; Durieux, Marcel E; Stevens, Markus F; Lirk, Philipp; Hollmann, Markus W

2013-01-01

Local anesthetics (LAs) are widely known for inhibition of voltage-gated sodium channels underlying their antiarrhythmic and antinociceptive effects. However, LAs have significant immunomodulatory properties and were shown to affect human neutrophil functions independent of sodium-channel blockade. Previous studies suggest a highly selective interaction between LAs and the α-subunit of G protein-coupled receptors of the Gq/G11 family as underlying mechanism. Providing a detailed structure function analysis, this study aimed to determine the active parts within the LA molecule responsible for the effects on human neutrophil priming. Human neutrophils were incubated with structurally different LAs for 60 minutes, followed by priming and activation using either platelet-activating factor or lysophosphatidic acid and N-formyl-methionyl-L-leucyl-L-phenylalanine. Superoxide anion generation was determined, using the cytochrome c reduction assay. Differences in priming inhibition of human neutrophils between LAs were smaller than expected, although significant. Ester-linked LAs blocked priming responses more effectively than did amide LAs. Furthermore, the inhibitory potency of LAs on priming decreased with an increase of their respective octanol-buffer coefficient, and inhibition did not correlate with sodium-channel-blocking potency. Charge was not crucially required for priming inhibition, yet it played a role in effect size. Local anesthetics significantly attenuated Gαq-protein-mediated neutrophil priming. The most potent inhibition was achieved by ester compounds, inversely correlated with their octanol-buffer coefficient, and enhanced by permanent charges within the LA molecule. No correlation to their potency of blocking sodium channels was found.

Alcohol marketing research: the need for a new agenda.

PubMed

Meier, Petra S

2011-03-01

This paper aims to contribute to a rethink of marketing research priorities to address policy makers' evidence needs in relation to alcohol marketing. Discussion paper reviewing evidence gaps identified during an appraisal of policy options to restrict alcohol marketing. Evidence requirements can be categorized as follows: (i) the size of marketing effects for the whole population and for policy-relevant population subgroups, (ii) the balance between immediate and long-term effects and the time lag, duration and cumulative build-up of effects and (iii) comparative effects of partial versus comprehensive marketing restrictions on consumption and harm. These knowledge gaps impede the appraisal and evaluation of existing and new interventions, because without understanding the size and timing of expected effects, researchers may choose inadequate time-frames, samples or sample sizes. To date, research has tended to rely on simplified models of marketing and has focused disproportionately on youth populations. The effects of cumulative exposure across multiple marketing channels, targeting of messages at certain population groups and indirect effects of advertising on consumption remain unclear. It is essential that studies into marketing effect sizes are geared towards informing policy decision-makers, anchored strongly in theory, use measures of effect that are well-justified and recognize fully the complexities of alcohol marketing efforts. © 2010 The Author, Addiction © 2010 Society for the Study of Addiction.

Direct contact membrane distillation for the concentration of saline dairy effluent.

PubMed

Kezia, Kezia; Lee, Judy; Weeks, Mike; Kentish, Sandra

2015-09-15

The ability of direct contact membrane distillation to concentrate the waste effluent from salty whey, a by-product from the cheese making industry has been investigated. The effect of trace protein in the feed, cross-flow velocity and feed acidity were the factors examined. Flat Sheet PTFE membranes of nominal pore sizes 0.05, 0.22 and 0.45 μm were utilised. A decline in feed flux in the presence of trace protein in the feed was observed, but liquid penetration through the membrane could still be prevented by utilization of a membrane of smaller pore size, to achieve a final total solids concentration of ±30% w/w with water recovery from 37 to 83 %. The pressure-drop across the channel length was also predicted accounting for the feed spacer. To increase the channel length up to 1 m will require operation using the smallest pore size of 0.05 μm, unless very low cross-flow velocities are used. The fouling of the membrane is primarily governed by precipitation of a calcium phosphate salt. However, operation at low pH does not improve the flux or the final salt concentration significantly. Copyright © 2015 Elsevier Ltd. All rights reserved.

From Fractal Trees to Deltaic Networks

NASA Astrophysics Data System (ADS)

Cazanacli, D.; Wolinsky, M. A.; Sylvester, Z.; Cantelli, A.; Paola, C.

2013-12-01

Geometric networks that capture many aspects of natural deltas can be constructed from simple concepts from graph theory and normal probability distributions. Fractal trees with symmetrical geometries are the result of replicating two simple geometric elements, line segments whose lengths decrease and bifurcation angles that are commonly held constant. Branches could also have a thickness, which in the case of natural distributary systems is the equivalent of channel width. In river- or wave-dominated natural deltas, the channel width is a function of discharge. When normal variations around the mean values for length, bifurcating angles, and discharge are applied, along with either pruning of 'clashing' branches or merging (equivalent to channel confluence), fractal trees start resembling natural deltaic networks, except that the resulting channels are unnaturally straight. Introducing a bifurcation probability fewer, naturally curved channels are obtained. If there is no bifurcation, the direction of each new segment depends on the direction the previous segment upstream (correlated random walk) and, to a lesser extent, on a general direction of growth (directional bias). When bifurcation occurs, the resulting two directions also depend on the bifurcation angle and the discharge split proportions, with the dominant branch following the direction of the upstream parent channel closely. The bifurcation probability controls the channel density and, in conjunction with the variability of the directional angles, the overall curvature of the channels. The growth of the network in effect is associated with net delta progradation. The overall shape and shape evolution of the delta depend mainly on the bifurcation angle average size and angle variability coupled with the degree of dominant direction dependency (bias). The proposed algorithm demonstrates how, based on only a few simple rules, a wide variety of channel networks resembling natural deltas, can be replicated. Network Example

Bathymetric and velocimetric surveys at highway bridges crossing the Missouri River in and into Missouri during summer flooding, July-August 2011

USGS Publications Warehouse

Huizinga, Richard J.

2012-01-01

Bathymetric and velocimetric surveys were conducted by the U.S. Geological Survey, in cooperation with the Kansas and Missouri Departments of Transportation, in the vicinity of 36 bridges at 27 highway crossings of the Missouri River between Brownville, Nebraska and St. Louis, Missouri, from July 13 through August 3, 2011, during a summer flood. A multibeam echo sounder mapping system was used to obtain channel-bed elevations for river reaches ranging from 1,350 to 1,860 feet and extending across the active channel of the Missouri River. These bathymetric scans provide a "snapshot" of the channel conditions at the time of the surveys and provide characteristics of scour holes that may be useful in the development of predictive guidelines or equations for scour holes. These data also may be used by the Kansas and Missouri Departments of Transportation to assess the bridges for stability and integrity issues with respect to bridge scour during floods. Bathymetric data were collected around every pier that was in water, except those at the edge of water, in extremely shallow water, or surrounded by debris rafts. Scour holes were present at most piers for which bathymetry could be obtained, except at piers on channel banks, those near or embedded in lateral or longitudinal spur dikes, and those on exposed bedrock outcrops. Scour holes observed at the surveyed bridges were examined with respect to depth and shape. Although exposure of parts of foundational support elements was observed at several piers, at most sites the exposure likely can be considered minimal compared to the overall substructure that remains buried in bed material; however, there were several notable exceptions where the bed material thickness between the bottom of the scour hole and bedrock was less than 6 feet. Such substantial exposure of usually buried substructural elements may warrant special observation in future flood events. Previous bathymetric surveys had been done at several of the sites, and comparisons between bathymetric surfaces from the previous surveys and those of this study indicate substantial variability in the response of the channel bed to the 2011 summer flood conditions. At sites in Kansas City, there was no consistent deepening of the channel or increase in the size of scour holes, despite substantially more discharge and a higher water-surface elevation in the 2011 surveys, which implies the high-flow conditions during the 2011 surveys created a similar scour scenario to the previous surveys. At Jefferson City and the St. Louis sites, there was a consistent deepening of the channel, and a slight to substantial increase in the depth of scour holes in the 2011 surveys compared to previous surveys, although the effects of the higher flow appeared to be mitigated by the shape and alignment of the piers at most sites in St. Louis. Construction activities related to a new bridge at the Atchison, Kansas, site likely have contributed to the substantial additional scour observed there in a previous survey during the 2010 flooding, and the subsequent aggradation of the channel bed observed in the 2011 survey. Pier size, nose shape, and alignment to flow also had a profound effect on the size of the scour hole observed for a given pier.

Urban Streams as Transporters or Transformers of Carbon and Nutrients: Does Size Matter?

NASA Astrophysics Data System (ADS)

Wood, K. L.; Kaushal, S.

2017-12-01

Urbanization degrades water quality, channel form/ function, and related ecosystem services. Biological and hydrological responses to urbanization vary between sites potentially due to watershed size, channel size, and geomorphology along the broader urban watershed continuum. We investigated if/when the size of a stream can influence water quality in urban watersheds. We conducted high-frequency sampling of a small polluted headwater stream and a large restored stream in the Anacostia watershed, Washington D.C. metro area. Temperature, pH, conductivity, discharge, dissolved inorganic carbon (DIC), dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) were measured 2-3 times a week at two locations near the University of Maryland campus. DOC showed strong positive linear relationships with discharge at both sites, but TDN showed significant but contrasting linear relationships in the small polluted headwater site vs. the larger restored stream. In the larger restored stream, TDN significantly decreased with increasing water temperatures, which potentially suggested biological uptake. In the headwater stream, TDN concentrations significantly increased with increasing temperature, which suggests a possible seasonal input from terrestrial or in-stream sources. Interestingly, there were significant relationships between DIC and DOC in the larger restored stream, which suggested that there may have been a biological coupling of carbon forms due to stream ecosystem metabolism. Differences in relationships between TDN, DIC, and DOC and discharge, pH, and water temperatures may indicate the effects of stream size and floodplain restoration on water chemistry responses to human inputs. Larger streams may show greater potential for biogeochemical transformations, and stream size may need to be better evaluated in efforts to prioritize restoration strategies.

Cystic fibrosis transmembrane conductance regulator: temperature-dependent cysteine reactivity suggests different stable conformers of the conduction pathway.

PubMed

Liu, Xuehong; Dawson, David C

2011-11-29

Cysteine scanning has been widely used to identify pore-lining residues in mammalian ion channels, including the cystic fibrosis transmembrane conductance regulator (CFTR). These studies, however, have been typically conducted at room temperature rather than human body temperature. Reports of substantial effects of temperature on gating and anion conduction in CFTR channels as well as an unexpected pattern of cysteine reactivity in the sixth transmembrane segment (TM6) prompted us to investigate the effect of temperature on the reactivity of cysteines engineered into TM6 of CFTR. We compared reaction rates at temperatures ranging from 22 to 37 °C for cysteines placed on either side of an apparent size-selective accessibility barrier previously defined by comparing reactivity toward channel-permeant and channel-impermeant, thiol-directed reagents. The results indicate that the reactivity of cysteines at three positions extracellular to the position of the accessibility barrier, 334, 336, and 337, is highly temperature-dependent. At 37 °C, cysteines at these positions were highly reactive toward MTSES(-), whereas at 22 °C, the reaction rates were 2-6-fold slower to undetectable. An activation energy of 157 kJ/mol for the reaction at position 337 is consistent with the hypothesis that, at physiological temperature, the extracellular portion of the CFTR pore can adopt conformations that differ significantly from those that can be accessed at room temperature. However, the position of the accessibility barrier defined empirically by applying channel-permeant and channel-impermeant reagents to the extracellular aspect of the pore is not altered. The results illuminate previous scanning results and indicate that the assay temperature is a critical variable in studies designed to use chemical modification to test structural models for the CFTR anion conduction pathway.

Identity and function of a cardiac mitochondrial small conductance Ca2+-activated K+ channel splice variant

PubMed Central

Yang, MeiYing; Camara, Amadou K.S.; Aldakkak, Mohammed; Kwok, Wai-Meng; Stowe, David F.

2017-01-01

We provide evidence for location and function of a small conductance, Ca2+-activated K+ (SKCa) channel isoform 3 (SK3) in mitochondria (m) of guinea pig, rat and human ventricular myocytes. SKCa agonists protected isolated hearts and mitochondria against ischemia/reperfusion (IR) injury; SKCa antagonists worsened IR injury. Intravenous infusion of a SKCa channel agonist/antagonist, respectively, in intact rats was effective in reducing/enhancing regional infarct size induced by coronary artery occlusion. Localization of SK3 in mitochondria was evidenced by Western blot of inner mitochondrial membrane, immunocytochemical staining of cardiomyocytes, and immunogold labeling of isolated mitochondria. We identified a SK3 splice variant in guinea pig (SK3.1, aka SK3a) and human ventricular cells (SK3.2) by amplifying mRNA, and show mitochondrial expression in mouse atrial tumor cells (HL-1) by transfection with full length and truncated SK3.1 protein. We found that the Nterminus is not required for mitochondrial trafficking but the C-terminus beyond the Ca2+ calmodulin binding domain is required for Ca2+ sensing to induce mK+ influx and/or promote mitochondrial localization. In isolated guinea pig mitochondria and in SK3 overexpressed HL-1 cells, mK+ influx was driven by adding CaCl2. Moreover, there was a greater fall in membrane potential (ΔΨm), and enhanced cell death with simulated cell injury after silencing SK3.1 with siRNA. Although SKCa channel opening protects the heart and mitochondria against IR injury, the mechanism for favorable bioenergetics effects resulting from SKCa channel opening remains unclear. SKCa channels could play an essential role in restraining cardiac mitochondria from inducing oxidative stress-induced injury resulting from mCa2+ overload. PMID:28342809

A Finite Element Solution of Lateral Periodic Poisson–Boltzmann Model for Membrane Channel Proteins

PubMed Central

Xu, Jingjie; Lu, Benzhuo

2018-01-01

Membrane channel proteins control the diffusion of ions across biological membranes. They are closely related to the processes of various organizational mechanisms, such as: cardiac impulse, muscle contraction and hormone secretion. Introducing a membrane region into implicit solvation models extends the ability of the Poisson–Boltzmann (PB) equation to handle membrane proteins. The use of lateral periodic boundary conditions can properly simulate the discrete distribution of membrane proteins on the membrane plane and avoid boundary effects, which are caused by the finite box size in the traditional PB calculations. In this work, we: (1) develop a first finite element solver (FEPB) to solve the PB equation with a two-dimensional periodicity for membrane channel proteins, with different numerical treatments of the singular charges distributions in the channel protein; (2) add the membrane as a dielectric slab in the PB model, and use an improved mesh construction method to automatically identify the membrane channel/pore region even with a tilt angle relative to the z-axis; and (3) add a non-polar solvation energy term to complete the estimation of the total solvation energy of a membrane protein. A mesh resolution of about 0.25 Å (cubic grid space)/0.36 Å (tetrahedron edge length) is found to be most accurate in linear finite element calculation of the PB solvation energy. Computational studies are performed on a few exemplary molecules. The results indicate that all factors, the membrane thickness, the length of periodic box, membrane dielectric constant, pore region dielectric constant, and ionic strength, have individually considerable influence on the solvation energy of a channel protein. This demonstrates the necessity to treat all of those effects in the PB model for membrane protein simulations. PMID:29495644

A Finite Element Solution of Lateral Periodic Poisson-Boltzmann Model for Membrane Channel Proteins.

PubMed

Ji, Nan; Liu, Tiantian; Xu, Jingjie; Shen, Longzhu Q; Lu, Benzhuo

2018-02-28

Membrane channel proteins control the diffusion of ions across biological membranes. They are closely related to the processes of various organizational mechanisms, such as: cardiac impulse, muscle contraction and hormone secretion. Introducing a membrane region into implicit solvation models extends the ability of the Poisson-Boltzmann (PB) equation to handle membrane proteins. The use of lateral periodic boundary conditions can properly simulate the discrete distribution of membrane proteins on the membrane plane and avoid boundary effects, which are caused by the finite box size in the traditional PB calculations. In this work, we: (1) develop a first finite element solver (FEPB) to solve the PB equation with a two-dimensional periodicity for membrane channel proteins, with different numerical treatments of the singular charges distributions in the channel protein; (2) add the membrane as a dielectric slab in the PB model, and use an improved mesh construction method to automatically identify the membrane channel/pore region even with a tilt angle relative to the z -axis; and (3) add a non-polar solvation energy term to complete the estimation of the total solvation energy of a membrane protein. A mesh resolution of about 0.25 Å (cubic grid space)/0.36 Å (tetrahedron edge length) is found to be most accurate in linear finite element calculation of the PB solvation energy. Computational studies are performed on a few exemplary molecules. The results indicate that all factors, the membrane thickness, the length of periodic box, membrane dielectric constant, pore region dielectric constant, and ionic strength, have individually considerable influence on the solvation energy of a channel protein. This demonstrates the necessity to treat all of those effects in the PB model for membrane protein simulations.

Solids-based concentrated solar power receiver

DOEpatents

None

2018-04-10

A concentrated solar power (CSP) system includes channels arranged to convey a flowing solids medium descending under gravity. The channels form a light-absorbing surface configured to absorb solar flux from a heliostat field. The channels may be independently supported, for example by suspension, and gaps between the channels are sized to accommodate thermal expansion. The light absorbing surface may be sloped so that the inside surfaces of the channels proximate to the light absorbing surface define downward-slanting channel floors, and the flowing solids medium flows along these floors. Baffles may be disposed inside the channels and oriented across the direction of descent of the flowing solids medium. The channels may include wedge-shaped walls forming the light-absorbing surface and defining multiple-reflection light paths for solar flux from the heliostat field incident on the light-absorbing surface.

A modelling study of hyporheic exchange pattern and the sequence, size, and spacing of stream bedforms in mountain stream networks, Oregon, USA.

Treesearch

Michael N. Gooseff; Justin K. Anderson; Steven M. Wondzell; Justin LaNier; Roy Haggerty

2005-01-01

Studies of hyporheic exchange flows have identified physical features of channels that control exchange flow at the channel unit scale, namely slope breaks in the longitudinal profile of streams that generate subsurface head distributions. We recently completed a field study that suggested channel unit spacing in stream longitudinal profiles can be used to predict the...

River meanders and channel size

USGS Publications Warehouse

Williams, G.P.

1986-01-01

This study uses an enlarged data set to (1) compare measured meander geometry to that predicted by the Langbein and Leopold (1966) theory, (2) examine the frequency distribution of the ratio radius of curvature/channel width, and (3) derive 40 empirical equations (31 of which are original) involving meander and channel size features. The data set, part of which comes from publications by other authors, consists of 194 sites from a large variety of physiographic environments in various countries. The Langbein-Leopold sine-generated-curve theory for predicting radius of curvature agrees very well with the field data (78 sites). The ratio radius of curvature/channel width has a modal value in the range of 2 to 3, in accordance with earlier work; about one third of the 79 values is less than 2.0. The 40 empirical relations, most of which include only two variables, involve channel cross-section dimensions (bankfull area, width, and mean depth) and meander features (wavelength, bend length, radius of curvature, and belt width). These relations have very high correlation coefficients, most being in the range of 0.95-0.99. Although channel width traditionally has served as a scale indicator, bankfull cross-sectional area and mean depth also can be used for this purpose. ?? 1986.

Interaction of boron cluster ions with water: Single collision dynamics and sequential etching

NASA Astrophysics Data System (ADS)

Hintz, Paul A.; Ruatta, Stephen A.; Anderson, Scott L.

1990-01-01

Reactions of mass-selected, cooled, boron cluster ions (B+n, n=1-14) with water have been studied for collision energies from 0.1 to 6.0 eV. Most work was done with D2O, however isotope effects were examined for selected reactant cluster ions. For all size clusters there are exoergic product channels, which in most cases have no activation barriers. Cross sections are generally large, however there are fluctuations with cluster size in total reactivity, collision energy dependences, and in product distributions. For small cluster ions, there is a multitude of product channels. For clusters larger than B+6, the product distributions are dominated by a single channel: Bn-1D++DBO. Under multiple collision conditions, the primary products undergo a remarkable sequence of secondary ``etching'' reactions. As these occur, boron atoms are continuously replaced by hydrogen, and the intermediate products retain the composition: Bn-mH+m. This highly efficient chemistry appears to continue unchanged as the composition changes from pure boron to mostly hydrogen. Comparison of these results is made with boron cluster ion reactions with O2 and D2, as well as reactions with water of aluminum and silicon cluster ions. Some discussion is given of the thermochemistry for these reactions, and a possible problem with the thermochemical data in the BOD/DBO system is discussed.

Wirelessly powered micro-tracer enabled by miniaturized antenna and microfluidic channel

NASA Astrophysics Data System (ADS)

Duan, G.; Zhao, X.; Seren, H. R.; Chen, C.; Zhang, X.

2015-12-01

A miniaturized antenna, 380μm by 380μm in size, was fabricated and integrated with a commercialized passive RFID chip to form a micro-tracer, whose size was 2mm by 1mm in total. The micro-tracer was wirelessly powered and interrogated by a single layer spiral reader antenna through near field coupling. To maximize the working distance, the resonant frequency of micro-tracer and reader antenna were matched at 840MHz. Due to the ultra small size of the tracer antenna, power transfer efficiency decreased dramatically as the distance between tracer antenna and reader antenna increased, thus the working distance of the microtracer was limited within 1mm. To achieve massive operation of the micro-tracer, a microfluidic platform was fabricated with in channel focusing and separation. Acrylic sheets were laser cut to define the channel and cover structure, then bonded together layer by layer with a glass substrate, on which reader antenna was integrated. Pump oil was used as the fluidic media carrying the micro-tracer flowing inside the microfluidic channel. The wireless power transfer and real-time communication was demonstrated with the micro-tracer flowing above the reader antenna, as the ID of the micro-tracer was retrieved and displayed on a computer screen.

Deciphering Depositional Signals in the Bed-Scale Stratigraphic Record of Submarine Channels

NASA Astrophysics Data System (ADS)

Sylvester, Z.; Covault, J. A.

2017-12-01

Submarine channels are important conduits of sediment transfer from rivers and shallow-marine settings into the deep sea. As such, the stratigraphic record of submarine-channel systems can store signals of past climate- and other environmental changes in their upstream sediment-source areas. This record is highly fragmented as channels are primarily locations of sediment bypass; channelized turbidity currents are likely to leave a more complete record in areas away from and above the thalweg. However, the link between the thick-bedded axial channel deposits that record a small number of flows and the much larger number of thin-bedded turbidites forming terrace- and levee deposits is poorly understood. We have developed a relatively simple two-dimensional model that, given a number of input flow parameters (mean velocity, grain size, duration of deposition, flow thickness), predicts the thickness and composition of the turbidite that is left behind in the channel and in the overbank areas. The model is based on a Rouse-type suspended sediment concentration profile and the Garcia-Parker entrainment function. In the vertical direction, turbidites tend to rapidly become thinner and finer-grained with height above thalweg, due to decreasing concentration. High near-thalweg concentrations result in thick axial beds. However, an increase in flow velocity can result in high entrainment and no deposition at the bottom of the channel, yet a thin layer of sand and mud is still deposited higher up on the channel bank. If channel thalwegs are largely in a bypass condition, relatively minor velocity fluctuations result in a few occasionally preserved thick beds in the axis, and numerous thin turbidites - and a more complete record - on the channel banks. We use near-seafloor data from the Niger Delta slope and an optimization algorithm to show how our model can be used to invert for likely flow parameters and match the bed thickness and grain size of 100 turbidites observed in a core taken from a slope channel terrace.

Observations and consequences of nonuniform aluminum concentrations in the channel regions of AlGaAs channeled-substrate-planar lasers

NASA Technical Reports Server (NTRS)

Evans, Gary A.; Goldstein, Bernard; Butler, Jerome K.

1987-01-01

Compositional changes in the n-clad layer within the channel region of channel substrate planar (CSP) type semiconductor lasers have been observed. As a consequece, a large optical cavity (LOC) or an enhanced substrate loss (ESL) version of the CSP geometry may result, both of which may have significantly different characteristics from those of a conventional CSP laser. The CSP-LOC generally has a larger near-field spot size, while the ESL-CSP is characterized by an off-axis, asymmetric far-field pattern.

The motion of a train of vesicles in channel flow

NASA Astrophysics Data System (ADS)

Barakat, Joseph; Shaqfeh, Eric

2017-11-01

The inertialess motion of a train of lipid-bilayer vesicles flowing through a channel is simulated using a 3D boundary integral equation method. Steady-state results are reported for vesicles positioned concentrically inside cylindrical channels of circular, square, and rectangular cross sections. The vesicle translational velocity U and excess channel pressure drop Δp+ depend strongly on the ratio of the vesicle radius to the hydraulic radius λ and the vesicle reduced volume υ. ``Deflated vesicles'' of lower reduced volume υ are more streamlined and translate with greater velocity U relative to the mean flow velocity V. Increasing the vesicle size (λ) increases the wall friction force and extra pressure drop Δp+, which in turn reduces the vesicle velocity U. Hydrodynamic interactions between vesicles in a periodic train are largely screened by the channel walls, in accordance with previous results for spheres and drops. The hydraulic resistance is compared across different cross sections, and a simple correction factor is proposed to unify the results. Nonlinear effects are observed when β - the ratio of membrane bending elasticity to viscous traction - is changed. The simulation results show excellent agreement with available experimental measurements as well as a previously reported ``small-gap theory'' valid for large values of λ. NSF CBET 1066263/1066334.

Numerical Simulation of Plume Transport in Channel Bend with Different Sediment Diameters

NASA Astrophysics Data System (ADS)

Kim, H. S.; Chen, H. C.

2017-12-01

The flow and transport of suspended sediment particles, in the form of plume, were simulated using an in-house Computational Fluid Dynamics (CFD) solver FANS3D (Finite Analytic Navier-Stokes code for 3D flow). The motivation for this investigation is to provide a means to simulate and visualize dispersal systems in a complex flow environment. The physical domain considered is a 90-degrees channel bend with wingwall abutments, which induces complex, three-dimensional flow characteristics. At the inlet of the channel, a sediment plume with the volumetric concentration of 1,000 parts per million (ppm) was constantly supplied. For simplicity, it was assumed that neither deposition nor erosion takes place inside the channel and settling sediment was made to pass through the bed surface. The effect of the sediment particle size was also analyzed using two different median diameters: 0.10 mm and 0.20 mm. It was shown that flow acceleration and vortices cause strong mixing inside the channel. The three-dimensional time series from the simulation captured increasing suspended sediment concentration downstream of the abutments, along the outer bank. When the median diameter was varied, the sediment concentration at certain locations differed by orders of magnitude, indicating that the settling velocity dominates the transport process for larger diameters.

Spray Gun With Constant Mixing Ratio

NASA Technical Reports Server (NTRS)

Simpson, William G.

1987-01-01

Conceptual mechanism mounted in handle of spray gun maintains constant ratio between volumetric flow rates in two channels leading to spray head. With mechanism, possible to keep flow ratio near 1:1 (or another desired ratio) over range of temperatures, orifice or channel sizes, or clogging conditions.

HYDRAULICS OF THE ATCHAFALAYA BASIN MAIN CHANNEL SYSTEM: CONSIDERATIONS FROM A MULTIUSE MANAGEMENT STANDPOINT

EPA Science Inventory

The report examines the relationships among hydraulic elements in the Atchafalaya Basin floodway system in terms of discharge regime, sediment load, channel form and size, flood control, water surface slope, bank elevation, overbank capacity, dredging requirements, and spoil disp...

Switching Matrix For Optical Signals

NASA Technical Reports Server (NTRS)

Grove, Charles H.

1990-01-01

Proposed matrix of electronically controlled shutters switches signals in optical fibers between multiple input and output channels. Size, weight, and power consumption reduced. Device serves as building block for small, low-power, broad-band television- and data-signal-switching systems providing high isolation between nominally disconnected channels.

Use of aerial photograph, channel-type interpretations to predict habitat availability in small streams. Restoration project 95505b. Exxon Valdez oil spill restoration project final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Olson, R.A.

1995-05-01

In-stream habitats were quantified and qualified for nine stream channel-types. The channel types were identified using interpretations from stereo pairs of color and infrared aerial photographs. A total of 70 sites were sampled for streams located on the northwest portion of the Kenai Peninsula, in south-central Alaska. Channel-types were a significant predictor (P < 0.05) of the area (sq m) for 9 of 13 habitat types. Channel-types that had similar habitat composition, differed in size and depth of those habitats. Spawning habitat also appeared to be correlated to channel-type, however the within channel-type variability caused the differences to test non-significantmore » P < 0.05.« less

Simulating the bio nanoelectronic interface

NASA Astrophysics Data System (ADS)

Millar, Campbell; Roy, Scott; Brown, Andrew R.; Asenov, Asen

2007-05-01

As the size of conventional nano-CMOS devices continues to shrink, they are beginning to approach the size of biologically relevant macromolecules such as ion channels. This, in concert with the increasing understanding of the behaviour of proteins in vivo, creates the potential for a revolution in the sensing, measurement and interaction with biological systems. In this paper we will demonstrate the theoretical possibility of directly coupling a nanoscale MOSFET with a model ion channel protein. This will potentially allow a much better understanding of the behaviour of biologically relevant molecules, since the measurement of the motion of charged particles can reveal a substantial amount of information about protein structure-function relationships. We can use the MOSFET's innate sensitivity to stray charge to detect the positions of single ions and, thus, better explore the dynamics of ion conduction in channel proteins. In addition, we also demonstrate that the MOSFET can be 'tuned' to sense current flow through channel proteins, thus providing, for the first time, a direct solid state/biological interface at the atomic level.

Investigation on onset voltage and conduction channel temperature in voltage-induced metal-insulator transition of vanadium dioxide

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yoon, Joonseok; Kim, Howon; Ju, Honglyoul, E-mail: tesl@yonsei.ac.kr

2016-03-28

The characteristics of onset voltages and conduction channel temperatures in the metal-insulator transition (MIT) of vanadium dioxide (VO{sub 2}) devices are investigated as a function of dimensions and ambient temperature. The MIT onset voltage varies from 18 V to 199 V as the device length increases from 5 to 80 μm at a fixed width of 100 μm. The estimated temperature at local conduction channel increases from 110 to 370 °C, which is higher than the MIT temperature (67 °C) of VO{sub 2}. A simple Joule-heating model is employed to explain voltage-induced MIT as well as to estimate temperatures of conduction channel appearing after MIT inmore » various-sized devices. Our findings on VO{sub 2} can be applied to micro- to nano-size tunable heating devices, e.g., microscale scanning thermal cantilevers and gas sensors.« less

Using Levee Setbacks to Increase Floodplain Connectivity and Reduce Flood Risk

NASA Astrophysics Data System (ADS)

Dahl, T. A.; Echevarria-Doyle, W.

2017-12-01

Levees typically constrain flood flows to within the main channel, isolating the river from its natural floodplain. Levees limit the areal and temporal extents of flooding, but can increase flood peaks, alter ecosystems, and cause scour. In order to mitigate these effects, some groups have begun moving portions of levees further away from the main channel, creating setback levees. Here we describe a series of levee setback scenarios for a hypothetical river that were modeled with the unsteady, 2D-hydraulic model AdH. In our scenarios, the water surface elevations were reduced both at the location of the levee setback and for some distance upstream. The models also show that the floodplain roughness can have a greater effect on the reduction in water surface elevation than the size of the levee setback. Groups planning levee setbacks can use these results to help guide their designs.

Almost all quantum channels are equidistant

NASA Astrophysics Data System (ADS)

Nechita, Ion; Puchała, Zbigniew; Pawela, Łukasz; Życzkowski, Karol

2018-05-01

In this work, we analyze properties of generic quantum channels in the case of large system size. We use random matrix theory and free probability to show that the distance between two independent random channels converges to a constant value as the dimension of the system grows larger. As a measure of the distance we use the diamond norm. In the case of a flat Hilbert-Schmidt distribution on quantum channels, we obtain that the distance converges to 1/2 +2/π , giving also an estimate for the maximum success probability for distinguishing the channels. We also consider the problem of distinguishing two random unitary rotations.

TPC2 controls pigmentation by regulating melanosome pH and size.

PubMed

Ambrosio, Andrea L; Boyle, Judith A; Aradi, Al E; Christian, Keith A; Di Pietro, Santiago M

2016-05-17

Melanin is responsible for pigmentation of skin and hair and is synthesized in a specialized organelle, the melanosome, in melanocytes. A genome-wide association study revealed that the two pore segment channel 2 (TPCN2) gene is strongly linked to pigmentation variations. TPCN2 encodes the two-pore channel 2 (TPC2) protein, a cation channel. Nevertheless, how TPC2 regulates pigmentation remains unknown. Here, we show that TPC2 is expressed in melanocytes and localizes to the melanosome-limiting membrane and, to a lesser extent, to endolysosomal compartments by confocal fluorescence and immunogold electron microscopy. Immunomagnetic isolation of TPC2-containing organelles confirmed its coresidence with melanosomal markers. TPCN2 knockout by means of clustered regularly interspaced short palindromic repeat/CRISPR-associated 9 gene editing elicited a dramatic increase in pigment content in MNT-1 melanocytic cells. This effect was rescued by transient expression of TPC2-GFP. Consistently, siRNA-mediated knockdown of TPC2 also caused a substantial increase in melanin content in both MNT-1 cells and primary human melanocytes. Using a newly developed genetically encoded pH sensor targeted to melanosomes, we determined that the melanosome lumen in TPC2-KO MNT-1 cells and primary melanocytes subjected to TPC2 knockdown is less acidic than in control cells. Fluorescence and electron microscopy analysis revealed that TPC2-KO MNT-1 cells have significantly larger melanosomes than control cells, but the number of organelles is unchanged. TPC2 likely regulates melanosomes pH and size by mediating Ca(2+) release from the organelle, which is decreased in TPC2-KO MNT-1 cells, as determined with the Ca(2+) sensor tyrosinase-GCaMP6. Thus, our data show that TPC2 regulates pigmentation through two fundamental determinants of melanosome function: pH and size.

Ca2+ release by inositol-trisphosphorothioate in isolated triads of rabbit skeletal muscle.

PubMed Central

Valdivia, C; Valdivia, H H; Potter, B V; Coronado, R

1990-01-01

The effectiveness of the nonmetabolizable second messenger analogue DL-myo-inositol 1,4,5-trisphosphorothioate (IPS3) described by Cooke, A. M., R. Gigg, and B. V. L. Potter, (1987b. Jour. Chem. Soc. Chem. Commun. 1525-1526.) was examined in triads purified from rabbit skeletal muscle. A Ca2+ electrode uptake-release assay was used to determine the size and sensitivity of the IPS3-releasable pool of Ca2+ in isolated triads. Uptake was initiated by 1 mM MgATP, pCa 5.8, pH 7.5 Release was initiated when the free Ca2+ had lowered to pCa approximately 7. We found that 5-25 microM myo-inositol 1,4,5-trisphosphate (IP3), and separately IPS3, consistently released 5-20% of the Ca2+ pool actively loaded into triads. Single channel recording was used to determine if ryanodine receptor Ca2+ release channels were affected by IPS3 at the same myoplasmic Ca2+ and IPS3 concentrations. Open probability of ryanodine receptor Ca2+ release channels was monitored in triads fused to bilayers over long periods (200 s) in the absence and following addition of 30 microM IPS3 to the same channel. At myoplasmic pCa approximately 7, IPS3 had no effect in the absence of MgATP (Po = 0.0094 +/- 0.001 in control and Po = 0.01 +/- 0.006 after IPS3) and slightly increased activity in the presence of 1 mM MgATP (Po = 0.024 +/- 0.03 in control and Po = 0.05 +/- 0.03 after IPS3). Equally small effects were observed at higher myoplasmic Ca2+. The onset of channel activation by IPS3 or IP3 was slow, on the time scale 20-60 s. We suggest that in isolated triads of rabbit skeletal muscle, IP3-induced release of stored Ca2+ is probably not mediated by the opening of Ca2+ release channels. PMID:2168221

Sedimentological downstream effects of dam failure and the role of sediment connectivity: a case study from the Bohemian Massif, Austria

NASA Astrophysics Data System (ADS)

Wurster, Maria-Theresia; Weigelhofer, Gabriele; Pichler-Scheder, Christian; Hein, Thomas; Pöppl, Ronald

2017-04-01

Sediment connectivity describes the potential for sediment transport through catchment systems, further defining locality and characteristics of sedimentation in river channels. Dams generally decrease sediment connectivity and act as temporary sediment sinks. When dams are removed these sediments are being reworked and released downstream. During dam restoration works along a small-sized stream in the Bohemian Massif of Austria in December 2015 a dam failure occurred which led to the entrainment of several tons of fine-grained reservoir sediments further entering and depositing in the downstream channel reaches, located in the Thayatal National Park. Aiming to remove these fine sediment deposits the National Park Authority decided to initiate a flushing event in April 2016. The main aim of the present study was to investigate the effects of dam failure-induced fine sediment release and reservoir flushing on downstream bed sediment characteristics by applying geomorphological mapping (incl. volumetric surveys) and sedimentological analyses (freeze-core sampling and granulometry), further discussing the role of in-channel sediment connectivity. The obtained results have shown that immediately after the dam failure event a total of ca. 18 m3 of fine-grained sediments have accumulated as in-channel sediment bars which were primarily formed in zones of low longitudinal connectivity (e.g. in the backwater areas of woody debris jams, or at slip-off bank locations). The flushing event has been shown to have caused remobilization and downstream translocation of these deposits, further reducing their total volume by approx. 60%. The results of the granulometric analyses of the freeze-core samples have revealed fine sediment accumulation and storage in the upper parts of the channel bed, having further increased after the flushing event. Additionally, effects on chemical conditions and invertebrate community have been observed. These observations clearly indicate a significant influence of vertical connectivity conditions on in-channel fine sediment storage.

Generation of sub-femtoliter droplet by T-junction splitting on microfluidic chips

NASA Astrophysics Data System (ADS)

Yang, Yu-Jun; Feng, Xuan; Xu, Na; Pang, Dai-Wen; Zhang, Zhi-Ling

2013-03-01

In the paper, sub-femtoliter droplets were easily produced by droplet splitting at a simple T-junction with orifice, which did not need expensive equipments, complex photolithography skill, or high energy input. The volume of the daughter droplet was not limited by channel size but controlled by channel geometry and fluidic characteristic. Moreover, single bead sampling and bead quantification in different orders of magnitude of droplet volumes were investigated. The droplets split at our T-junction chip had small volume and monodispersed size and could be produced efficiently, orderly, and controllably.

Do Shale Pore Throats Have a Threshold Diameter for Oil Storage?

PubMed Central

Zou, Caineng; Jin, Xu; Zhu, Rukai; Gong, Guangming; Sun, Liang; Dai, Jinxing; Meng, Depeng; Wang, Xiaoqi; Li, Jianming; Wu, Songtao; Liu, Xiaodan; Wu, Juntao; Jiang, Lei

2015-01-01

In this work, a nanoporous template with a controllable channel diameter was used to simulate the oil storage ability of shale pore throats. On the basis of the wetting behaviours at the nanoscale solid-liquid interfaces, the seepage of oil in nano-channels of different diameters was examined to accurately and systematically determine the effect of the pore diameter on the oil storage capacity. The results indicated that the lower threshold for oil storage was a pore throat of 20 nm, under certain conditions. This proposed pore size threshold provides novel, evidence-based criteria for estimating the geological reserves, recoverable reserves and economically recoverable reserves of shale oil. This new understanding of shale oil processes could revolutionize the related industries. PMID:26314637

Do Shale Pore Throats Have a Threshold Diameter for Oil Storage?

PubMed

Zou, Caineng; Jin, Xu; Zhu, Rukai; Gong, Guangming; Sun, Liang; Dai, Jinxing; Meng, Depeng; Wang, Xiaoqi; Li, Jianming; Wu, Songtao; Liu, Xiaodan; Wu, Juntao; Jiang, Lei

2015-08-28

In this work, a nanoporous template with a controllable channel diameter was used to simulate the oil storage ability of shale pore throats. On the basis of the wetting behaviours at the nanoscale solid-liquid interfaces, the seepage of oil in nano-channels of different diameters was examined to accurately and systematically determine the effect of the pore diameter on the oil storage capacity. The results indicated that the lower threshold for oil storage was a pore throat of 20 nm, under certain conditions. This proposed pore size threshold provides novel, evidence-based criteria for estimating the geological reserves, recoverable reserves and economically recoverable reserves of shale oil. This new understanding of shale oil processes could revolutionize the related industries.

Synthesis, characterization, and evaluation of a superficially porous particle with unique, elongated pore channels normal to the surface.

PubMed

Wei, Ta-Chen; Mack, Anne; Chen, Wu; Liu, Jia; Dittmann, Monika; Wang, Xiaoli; Barber, William E

2016-04-01

In recent years, superficially porous particles (SPPs) have drawn great interest because of their special particle characteristics and improvement in separation efficiency. Superficially porous particles are currently manufactured by adding silica nanoparticles onto solid cores using either a multistep multilayer process or one-step coacervation process. The pore size is mainly controlled by the size of the silica nanoparticles and the tortuous pore channel geometry is determined by how those nanoparticles randomly aggregate. Such tortuous pore structure is also similar to that of all totally porous particles used in HPLC today. In this article, we report on the development of a next generation superficially porous particle with a unique pore structure that includes a thinner shell thickness and ordered pore channels oriented normal to the particle surface. The method of making the new superficially porous particles is a process called pseudomorphic transformation (PMT), which is a form of micelle templating. Porosity is no longer controlled by randomly aggregated nanoparticles but rather by micelles that have an ordered liquid crystal structure. The new particle possesses many advantages such as a narrower particle size distribution, thinner porous layer with high surface area and, most importantly, highly ordered, non-tortuous pore channels oriented normal to the particle surface. This PMT process has been applied to make 1.8-5.1μm SPPs with pore size controlled around 75Å and surface area around 100m(2)/g. All particles with different sizes show the same unique pore structure with tunable pore size and shell thickness. The impact of the novel pore structure on the performance of these particles is characterized by measuring van Deemter curves and constructing kinetic plots. Reduced plate heights as low as 1.0 have been achieved on conventional LC instruments. This indicates higher efficiency of such particles compared to conventional totally porous and superficially porous particles. Copyright © 2016 Elsevier B.V. All rights reserved.

Cirrus Horizontal Heterogeneity Effects on Cloud Optical Properties Retrieved from MODIS VNIR to TIR Channels as a Function of the Spatial Resolution

NASA Astrophysics Data System (ADS)

Fauchez, T.; Platnick, S. E.; Sourdeval, O.; Wang, C.; Meyer, K.; Cornet, C.; Szczap, F.

2017-12-01

Cirrus are an important part of the Earth radiation budget but an assessment of their role yet remains highly uncertain. Cirrus optical properties such as Cloud Optical Thickness (COT) and ice crystal effective particle size (Re) are often retrieved with a combination of Visible/Near InfraRed (VNIR) and ShortWave-InfraRed (SWIR) reflectance channels. Alternatively, Thermal InfraRed (TIR) techniques, such as the Split Window Technique (SWT), have demonstrated better sensitivity to thin cirrus. However, current satellite operational products for both retrieval methods assume that cloudy pixels are horizontally homogeneous (Plane Parallel and Homogeneous Approximation (PPHA)) and independent (Independent Pixel Approximation (IPA)). The impact of these approximations on cirrus retrievals needs to be understood and, as far as possible, corrected. Horizontal heterogeneity effects can be more easily estimated and corrected in the TIR range because they are mainly dominated by the PPA bias, which primarily depends on the COT subpixel heterogeneity. For solar reflectance channels, in addition to the PPHA bias, the IPA can lead to significant retrieval errors if there is large photon transport between cloudy columns in addition to brightening and shadowing effects that are more difficult to quantify.The effects of cirrus horizontal heterogeneity are here studied on COT and Re retrievals obtained using simulated MODIS reflectances at 0.86 and 2.11 μm and radiances at 8.5, 11.0 and 12.0 μm, for spatial resolutions ranging from 50 m to 10 km. For each spatial resolution, simulated TOA reflectances and radiances are combined for cloud optical property retrievals with a research-level optimal estimation retrieval method (OEM). The impact of horizontal heterogeneity on the retrieved products is assessed for different solar geometries and various combinations of the five channels.

Behavior of nanoparticle clouds around a magnetized microsphere under magnetic and flow fields.

PubMed

Magnet, C; Kuzhir, P; Bossis, G; Meunier, A; Nave, S; Zubarev, A; Lomenech, C; Bashtovoi, V

2014-03-01

When a micron-sized magnetizable particle is introduced into a suspension of nanosized magnetic particles, the nanoparticles accumulate around the microparticle and form thick anisotropic clouds extended in the direction of the applied magnetic field. This phenomenon promotes colloidal stabilization of bimodal magnetic suspensions and allows efficient magnetic separation of nanoparticles used in bioanalysis and water purification. In the present work, the size and shape of nanoparticle clouds under the simultaneous action of an external uniform magnetic field and the flow have been studied in detail. In experiments, a dilute suspension of iron oxide nanoclusters (of a mean diameter of 60 nm) was pushed through a thin slit channel with the nickel microspheres (of a mean diameter of 50 μm) attached to the channel wall. The behavior of nanocluster clouds was observed in the steady state using an optical microscope. In the presence of strong enough flow, the size of the clouds monotonically decreases with increasing flow speed in both longitudinal and transverse magnetic fields. This is qualitatively explained by enhancement of hydrodynamic forces washing the nanoclusters away from the clouds. In the longitudinal field, the flow induces asymmetry of the front and the back clouds. To explain the flow and the field effects on the clouds, we have developed a simple model based on the balance of the stresses and particle fluxes on the cloud surface. This model, applied to the case of the magnetic field parallel to the flow, captures reasonably well the flow effect on the size and shape of the cloud and reveals that the only dimensionless parameter governing the cloud size is the ratio of hydrodynamic-to-magnetic forces-the Mason number. At strong magnetic interactions considered in the present work (dipolar coupling parameter α≥2), the Brownian motion seems not to affect the cloud behavior.

Behavior of nanoparticle clouds around a magnetized microsphere under magnetic and flow fields

NASA Astrophysics Data System (ADS)

Magnet, C.; Kuzhir, P.; Bossis, G.; Meunier, A.; Nave, S.; Zubarev, A.; Lomenech, C.; Bashtovoi, V.

2014-03-01

When a micron-sized magnetizable particle is introduced into a suspension of nanosized magnetic particles, the nanoparticles accumulate around the microparticle and form thick anisotropic clouds extended in the direction of the applied magnetic field. This phenomenon promotes colloidal stabilization of bimodal magnetic suspensions and allows efficient magnetic separation of nanoparticles used in bioanalysis and water purification. In the present work, the size and shape of nanoparticle clouds under the simultaneous action of an external uniform magnetic field and the flow have been studied in detail. In experiments, a dilute suspension of iron oxide nanoclusters (of a mean diameter of 60 nm) was pushed through a thin slit channel with the nickel microspheres (of a mean diameter of 50 μm) attached to the channel wall. The behavior of nanocluster clouds was observed in the steady state using an optical microscope. In the presence of strong enough flow, the size of the clouds monotonically decreases with increasing flow speed in both longitudinal and transverse magnetic fields. This is qualitatively explained by enhancement of hydrodynamic forces washing the nanoclusters away from the clouds. In the longitudinal field, the flow induces asymmetry of the front and the back clouds. To explain the flow and the field effects on the clouds, we have developed a simple model based on the balance of the stresses and particle fluxes on the cloud surface. This model, applied to the case of the magnetic field parallel to the flow, captures reasonably well the flow effect on the size and shape of the cloud and reveals that the only dimensionless parameter governing the cloud size is the ratio of hydrodynamic-to-magnetic forces—the Mason number. At strong magnetic interactions considered in the present work (dipolar coupling parameter α ≥2), the Brownian motion seems not to affect the cloud behavior.

Channel Formation in Physical Experiments: Examples from Deep and Shallow Water Clastic Sedimentary Systems

NASA Astrophysics Data System (ADS)

Hoyal, D. C.; Sheets, B. A.

2005-12-01

The degree to which experimental sedimentary systems form channels has an important bearing on their applicability as analogs of large-scale natural systems, where channels and their associated landforms are ubiquitous. The internal geometry and properties (e.g., grain size, vertical succession and stacking) of many depositional landforms can be directly linked to the processes of channel initiation and evolution. Unfortunately, strong self-channelization, a prerequisite for certain natural phenomena (e.g. mouth lobe development, meandering, etc.), has been difficult to reproduce at laboratory scales. In shallow-water experiments (sub-aerial), although weak channelization develops relatively easily, as is commonly observed in gutters after a rain storm, strong channelization with well-developed banks has proved difficult to model. In deep water experiments the challenge is even greater. Despite considerable research effort experimental conditions for deep water channel initiation have only recently been identified. Experiments on the requisite conditions for channelization in shallow and deep water have been ongoing at the ExxonMobil Upstream Research Company (EMURC) for several years. By primarily manipulating the cohesiveness of the sediment supply we have developed models of distributive systems with well-defined channels in shallow water, reminiscent of fine grained river-dominated deltas like the Mississippi. In deep water we have developed models that demonstrate strong channelization and associated lobe behavior in a distributive setting, by scaling up an approach developed by another group using salt-water flows and low-density plastic sediment. The experiments highlight a number of important controls on experimental channel formation, including: (1) bed strength or cohesiveness; (2) bedform development; and (3) Reynolds number. Among these controls bed forms disrupt the channel forming instability, reducing the energy available for channelization. The fundamental channel instability develops in both laminar and turbulent flow but with important differences. The scaling of these effects is the focus of ongoing research. In general it was observed that there are strong similarities between the processes and sedimentary products in shallow and deep water systems. Further, strong channelization in EMURC experiments provides insights into the evolution of distributive systems including: (1) the cyclic process of lobe formation and channel growth at a channel mouth, (2) types of channel fill, (3) architectural differences between channel fill and lobe deposits, (4) channel backfilling and avulsion, (5) Channel initiation vs. entrenched channel phases, (6) knickpoints and channel erosion, (7) structure of overbank, levee-building flows, and (8) the role of levees in altering the distributive channel pattern.

How Well Can We Predict Salmonid Spawning Habitat with LiDAR?

NASA Astrophysics Data System (ADS)

Pfeiffer, A.; Finnegan, N. J.; Hayes, S.

2013-12-01

Suitable salmonid spawning habitat is, to a great extent, determined by physical, landscape driven characteristics such as channel morphology and grain size. Identifying reaches with high-quality spawning habitat is essential to restoration efforts in areas where salmonid species are endangered or threatened. While both predictions of suitable habitat and observations of utilized habitat are common in the literature, they are rarely combined. Here we exploit a unique combination of high-resolution LiDAR data and seven years of 387 individually surveyed Coho and Steelhead redds in Scott Creek, a 77 km2 un-glaciated coastal California drainage in the Santa Cruz Mountains, to both make and test predictions of spawning habitat. Using a threshold channel assumption, we predict grain size throughout Scott Creek via a shear stress model that incorporates channel width, instead of height, using Manning's equation (Snyder et al., 2013). Slope and drainage area are computed from a LiDAR-derived DEM, and channel width is calculated via hydraulic modeling. Our results for median grain size predictions closely match median grain sizes (D50) measured in the field, with the majority of sites having predicted D50's within a factor of two of the observed values, especially for reaches with D50 > 0.02m. This success suggests that the threshold model used to predict grain size is appropriate for un-glaciated alluvial channel systems. However, it appears that grain size alone is not a strong predictor of salmon spawning. Reaches with a high (>0.1m) average predicted D50 do have lower redd densities, as expected based on spawning gravel sizes in the literature. However, reaches with lower (<0.1m) predicted D50 have a wide range of redd densities, suggesting that reach-average grain size alone cannot explain spawning site selection in the finer-grained reaches of Scott Creek. We turn to analysis of bedform morphology in order to explain the variation in redd density in the low-slope, finer-grained reaches of Lower Scott Creek. Because spawning is strongly correlated with riffle locations, we use a LiDAR-derived longitudinal profile to predict where riffle habitat is located within the watershed. To accomplish this, we use previous studies that constrain pool-riffle habitat to slopes <1.5%, then use wavelet analysis of the longitudinal profile within these pool-riffle reaches to investigate the spacing of drops in water surface slope, with the goal of identifying reaches with high riffle density. Our slope-based predictions of pool-riffle morphology closely match the extent of pool-riffle reaches observed in the field. Average redd density in pool-riffle reaches is more than double the average redd density in reaches of other channel morphologies. Initial wavelet analysis suggests that riffle spacing may be longer in the lower reaches of Scott Creek and shorter in the high-redd density upper reaches, a finding that agrees with the hypothesis that spawning habitat is limited by riffle density. Our results suggest that high resolution topographic data can be successfully used to identify reaches of utilized spawning habitat based on grain size predictions and wavelet analysis of bedform spacing.

Numerical analysis of lasing characteristics in highly bend-compensated large-mode-area ytterbium-doped double-clad leakage channel fibers.

PubMed

Thavasi Raja, G; Halder, Raktim; Varshney, S K

2015-12-10

The bend-induced mode-area reduction and thermal effects are vital factors that affect the power scaling of fiber lasers. Recently, bend-compensated large-mode-area double-clad modified hybrid leakage channel fiber (M-HLCF) has been reported with a mode area greater than 1000  μm, while sustaining the single-mode behavior at 1064 nm for high-temperature environments. In this work, the lasing characteristics of a newly designed ytterbium-doped double-clad M-HLCF (YDMHLCF) have been numerically investigated for strongly pumped conditions. The doped region size is optimally found through simulations, equivalent to the size of core diameter ∼38  μm in order to achieve maximum conversion efficiency for the bent and straight cases. Numerical simulations further confirm that a 2 m long YDMHLCF exhibits slope efficiency of 78% and conversion efficiency of 79% for the straight case and also almost the same for the practical bending radius of 7.5 cm when pumped with a 975 nm laser source.

Direct Numerical Simulations of Particle-Laden Turbulent Channel Flow

NASA Astrophysics Data System (ADS)

Jebakumar, Anand Samuel; Premnath, Kannan; Abraham, John

2017-11-01

In a recent experimental study, Lau and Nathan (2014) reported that the distribution of particles in a turbulent pipe flow is strongly influenced by the Stokes number (St). At St lower than 1, particles migrate toward the wall and at St greater than 10 they tend to migrate toward the axis. It was suggested that this preferential migration of particles is due to two forces, the Saffman lift force and the turbophoretic force. Saffman lift force represents a force acting on the particle as a result of a velocity gradient across the particle when it leads or lags the fluid flow. Turbophoretic force is induced by turbulence which tends to move the particle in the direction of decreasing turbulent kinetic energy. In this study, the Lattice Boltzmann Method (LBM) is employed to simulate a particle-laden turbulent channel flow through Direct Numerical Simulations (DNS). We find that the preferential migration is a function of particle size in addition to the St. We explain the effect of the particle size and St on the Saffman lift force and turbophoresis and present how this affects particle concentration at different conditions.

Direct Numerical Simulation of turbulent heat transfer up to Reτ = 2000

NASA Astrophysics Data System (ADS)

Hoyas, Sergio; Pérez-Quiles, Jezabel; Lluesma-Rodríguez, Federico

2017-11-01

We present a new set of direct numerical simulations of turbulent heat transfer in a channel flow for a Prandtl number of 0.71 and a friction Reynolds number of 2000. Mixed boundary conditions, i.e., wall temperature is time independent and varies linearly along streamwise component, have been used as boundary conditions for the thermal field. The effect of the size of the box in the one point statistics of the thermal field, and the kinetic energy, dissipation and turbulent budgets has been studied, showing that a domain with streamwise and spanwise sizes of 4 πh and 2 πh, where h is the channel half-height, is large enough to reproduce the one point statistics of larger boxes. The scaling of the previous quantities with respect to the Reynolds number has been also studied using a new dataset of simulations at smaller Reynolds number, finding two different scales for the inner and outer layers of the flow. Funded by project ENE2015-71333-R of the Spanish Ministerio de Economía y Competitividad.

Cross-point-type spin-transfer-torque magnetoresistive random access memory cell with multi-pillar vertical body channel MOSFET

NASA Astrophysics Data System (ADS)

Sasaki, Taro; Endoh, Tetsuo

2018-04-01

In this paper, from the viewpoint of cell size and sensing margin, the impact of a novel cross-point-type one transistor and one magnetic tunnel junction (1T–1MTJ) spin-transfer-torque magnetoresistive random access memory (STT-MRAM) cell with a multi-pillar vertical body channel (BC) MOSFET is shown for high density and wide sensing margin STT-MRAM, with a 10 ns writing period and 1.2 V V DD. For that purpose, all combinations of n/p-type MOSFETs and bottom/top-pin MTJs are compared, where the diameter of MTJ (D MTJ) is scaled down from 55 to 15 nm and the tunnel magnetoresistance (TMR) ratio is increased from 100 to 200%. The results show that, benefiting from the proposed STT-MRAM cell with no back bias effect, the MTJ with a high TMR ratio (200%) can be used in the design of smaller STT-MRAM cells (over 72.6% cell size reduction), which is a difficult task for conventional planar MOSFET based design.

Characterization of polymerized liposomes using a combination of dc and cyclical electrical field-flow fractionation.

PubMed

Sant, Himanshu J; Chakravarty, Siddharth; Merugu, Srinivas; Ferguson, Colin G; Gale, Bruce K

2012-10-02

Characterization of polymerized liposomes (PolyPIPosomes) was carried out using a combination of normal dc electrical field-flow fractionation and cyclical electrical field-flow fractionation (CyElFFF) as an analytical technique. The constant nature of the carrier fluid and channel configuration for this technique eliminates many variables associated with multidimensional analysis. CyElFFF uses an oscillating field to induce separation and is performed in the same channel as standard dc electrical field-flow fractionation separation. Theory and experimental methods to characterize nanoparticles in terms of their sizes and electrophoretic mobilities are discussed in this paper. Polystyrene nanoparticles are used for system calibration and characterization of the separation performance, whereas polymerized liposomes are used to demonstrate the applicability of the system to biomedical samples. This paper is also the first to report separation and a higher effective field when CyElFFF is operated at very low applied voltages. The technique is shown to have the ability to quantify both particle size and electrophoretic mobility distributions for colloidal polystyrene nanoparticles and PolyPIPosomes.

Acute alcohol-induced protection against infarction in rabbit hearts: differences from and similarities to ischemic preconditioning.

PubMed

Krenz, M; Baines, C P; Heusch, G; Downey, J M; Cohen, M V

2001-11-01

Recent studies reveal that brief ethanol exposure induces cardioprotection against simulated ischemia in cardiomyocytes by the activation of protein kinase C- epsilon. The present study tests the ability of ethanol to induce protection in rabbit hearts in which infarct size was the end-point and explores the signal transduction pathways involved. In isolated rabbit hearts, 50 m m ethanol infused for 5 min with 10 min of washout prior to 30 min of regional ischemia reduced infarct size (triphenyltetrazolium chloride staining) by 49%. Neither adenosine receptor blockade with 8-(p -sulfophenyl) theophylline nor the free radical scavenger N-2-mercaptopropionyl glycine inhibited the protection triggered by ethanol. In contrast, protein kinase C inhibition with chelerythrine, protein tyrosine kinase inhibition with genistein, and blockade of ATP-sensitive potassium channels (K(ATP)) with either 5-hydroxydecanoate or glibenclamide did abolish protection. Thus, transient ethanol exposure followed by washout prior to ischemia elicits a preconditioning-like effect involving protein kinase C, at least one protein tyrosine kinase, and K(ATP)channels, but neither adenosine nor free radicals. Copyright 2001 Academic Press.

Comparing particle-size distributions in modern and ancient sand-bed rivers

NASA Astrophysics Data System (ADS)

Hajek, E. A.; Lynds, R. M.; Huzurbazar, S. V.

2011-12-01

Particle-size distributions yield valuable insight into processes controlling sediment supply, transport, and deposition in sedimentary systems. This is especially true in ancient deposits, where effects of changing boundary conditions and autogenic processes may be detected from deposited sediment. In order to improve interpretations in ancient deposits and constrain uncertainty associated with new methods for paleomorphodynamic reconstructions in ancient fluvial systems, we compare particle-size distributions in three active sand-bed rivers in central Nebraska (USA) to grain-size distributions from ancient sandy fluvial deposits. Within the modern rivers studied, particle-size distributions of active-layer, suspended-load, and slackwater deposits show consistent relationships despite some morphological and sediment-supply differences between the rivers. In particular, there is substantial and consistent overlap between bed-material and suspended-load distributions, and the coarsest material found in slackwater deposits is comparable to the coarse fraction of suspended-sediment samples. Proxy bed-load and slackwater-deposit samples from the Kayenta Formation (Lower Jurassic, Utah/Colorado, USA) show overlap similar to that seen in the modern rivers, suggesting that these deposits may be sampled for paleomorphodynamic reconstructions, including paleoslope estimation. We also compare grain-size distributions of channel, floodplain, and proximal-overbank deposits in the Willwood (Paleocene/Eocene, Bighorn Basin, Wyoming, USA), Wasatch (Paleocene/Eocene, Piceance Creek Basin, Colorado, USA), and Ferris (Cretaceous/Paleocene, Hanna Basin, Wyoming, USA) formations. Grain-size characteristics in these deposits reflect how suspended- and bed-load sediment is distributed across the floodplain during channel avulsion events. In order to constrain uncertainty inherent in such estimates, we evaluate uncertainty associated with sample collection, preparation, analytical particle-size analysis, and statistical characterization in both modern and ancient settings. We consider potential error contributions and evaluate the degree to which this uncertainty might be significant in modern sediment-transport studies and ancient paleomorphodynamic reconstructions.

The Effectiveness and Cost of Lifestyle Interventions Including Nutrition Education for Diabetes Prevention: A Systematic Review and Meta-Analysis.

PubMed

Sun, Yu; You, Wen; Almeida, Fabio; Estabrooks, Paul; Davy, Brenda

2017-03-01

Type 2 diabetes is a significant public health concern. With the completion of the Diabetes Prevention Program, there has been a proliferation of studies attempting to translate this evidence base into practice. However, the cost, effectiveness, and cost-effectiveness of these adapted interventions is unknown. The purpose of this systematic review was to conduct a comprehensive meta-analysis to synthesize the effectiveness, cost, and cost-effectiveness of lifestyle diabetes prevention interventions and compare effects by intervention delivery agent (dietitian vs non-dietitian) and channel (in-person vs technology-delivered). English and full-text research articles published up to July 2015 were identified using the Cochrane Library, PubMed, Education Resources Information Center, CAB Direct, Science Direct, and Google Scholar. Sixty-nine studies met inclusion criteria. Most employed both dietary and physical activity intervention components (four of 69 were diet-only interventions). Changes in weight, fasting and 2-hour blood glucose concentration, and hemoglobin A1c were extracted from each article. Heterogeneity was measured by the I 2 index, and study-specific effect sizes or mean differences were pooled using a random effects model when heterogeneity was confirmed. Participants receiving intervention with nutrition education experienced a reduction of 2.07 kg (95% CI 1.52 to 2.62; P<0.001; I 2 =90.99%, 95% CI 88.61% to 92.87%) in weight at 12 months with effect sizes over time ranging from small (0.17, 95% CI 0.04 to 0.30; P=0.012; I 2 = 86.83%, 95% CI 80.42% to 91.14%) to medium (0.65, 95% CI 0.49 to 0.82; P<0.001; I 2 =98.75%, 95% CI 98.52% to 98.94). Effect sizes for 2-hour blood glucose and hemoglobin A1c level changes ranged from small to medium. The meta-regression analysis revealed a larger relative weight loss in dietitian-delivered interventions than in those delivered by nondietitians (full sample: -1.0 kg; US subsample: -2.4 kg), and did not find statistical evidence that the delivery channel was an important predictor of weight loss. The average cost per kilogram weight loss ranged from $34.06 over 6 months to $1,005.36 over 12 months. The cost of intervention per participant delivered by dietitians was lower than interventions delivered by non-dietitians, although few studies reported costs. Lifestyle interventions are effective in reducing body weight and glucose-related outcomes. Dietitian-delivered interventions, compared with those delivered by other personnel, achieved greater weight reduction. No consistent trend was identified across different delivery channels. Copyright © 2017 Academy of Nutrition and Dietetics. Published by Elsevier Inc. All rights reserved.

The effectiveness and cost of lifestyle intervention including nutrition education for diabetes prevention: A systematic review and meta-analysis

PubMed Central

Sun, Yu; You, Wen; Almeida, Fabio; Estabrooks, Paul

2016-01-01

Background Type 2 diabetes is a significant public health concern. With the completion of the Diabetes Prevention Program, there has been a proliferation of studies attempting to translate this evidence base into practice. However, the cost, effectiveness, and cost-effectiveness of these adapted interventions is unknown. Objective The purpose of this systematic review was to conduct a comprehensive meta-analysis to synthesize the effectiveness, cost, and cost-effectiveness of lifestyle diabetes prevention interventions and compare effects by intervention delivery agent (dietitian vs non-dietitian) and channel (in-person vs technology-delivered). Methods English and full-text research articles published up to July 2015 were identified using the Cochrane Library, PubMed, ERIC, CAB Direct, Science Direct and Google Scholar. Sixty-nine studies met inclusion criteria. Most employed both dietary and physical activity intervention components (four of 69 were diet-only interventions). Changes in weight, fasting and 2-hour blood glucose concentration, and hemoglobin A1c were extracted from each article. Heterogeneity was measured by the I^2 index, and study-specific effect sizes or mean differences were pooled using a random effects model when heterogeneity was confirmed. Results Participants receiving intervention with nutrition education experienced a reduction of 2.07 kg (95% CI: 1.52 to 2.62; p<0.001; I2=90.99%, 95% CI: 88.61% to 92.87%) in weight at 12 months with effect sizes over time ranging from small (0.17, 95% CI: 0.04 to 0.30; p=0.012; I2= 86.83%, 95% CI: 80.42% to 91.14%) to medium (0.65, 95% CI: 0.49 to 0.82; p<0.001; I2= 98.75%, 95% CI: 98.52% to 98.94). Effect sizes for 2-h blood glucose and HbA1c changes ranged from small to medium. The meta-regression analysis revealed a larger relative weight loss in dietitian-delivered interventions than in those delivered by non-dietitians (full sample: −1.0 kg; US subsample: −2.4 kg), and did not find statistical evidence that the delivery channel was an important predictor of weight loss. The average cost per kg weight loss ranged from $53.87 over 2 months to $1,005.36 over 12 months. The cost of intervention per participant delivered by dietitians was lower than interventions delivered by non-dietitians, though few studies reported costs. Conclusions Lifestyle interventions are effective in reducing body weight and glucose-related outcomes. Dietitian-delivered interventions, compared to those delivered by other personnel, achieved greater weight reduction. No consistent trend was identified across different delivery channels. PMID:28236962

The Effect of Neural Noise on Spike Time Precision in a Detailed CA3 Neuron Model

PubMed Central

Kuriscak, Eduard; Marsalek, Petr; Stroffek, Julius; Wünsch, Zdenek

2012-01-01

Experimental and computational studies emphasize the role of the millisecond precision of neuronal spike times as an important coding mechanism for transmitting and representing information in the central nervous system. We investigate the spike time precision of a multicompartmental pyramidal neuron model of the CA3 region of the hippocampus under the influence of various sources of neuronal noise. We describe differences in the contribution to noise originating from voltage-gated ion channels, synaptic vesicle release, and vesicle quantal size. We analyze the effect of interspike intervals and the voltage course preceding the firing of spikes on the spike-timing jitter. The main finding of this study is the ranking of different noise sources according to their contribution to spike time precision. The most influential is synaptic vesicle release noise, causing the spike jitter to vary from 1 ms to 7 ms of a mean value 2.5 ms. Of second importance was the noise incurred by vesicle quantal size variation causing the spike time jitter to vary from 0.03 ms to 0.6 ms. Least influential was the voltage-gated channel noise generating spike jitter from 0.02 ms to 0.15 ms. PMID:22778784

Modeling Changes in Bed Surface Texture and Aquatic Habitat Caused by Run-of-River Hydropower Development

NASA Astrophysics Data System (ADS)

Fuller, T. K.; Venditti, J. G.; Nelson, P. A.; Popescu, V.; Palen, W.

2014-12-01

Run-of-river (RoR) hydropower has emerged as an important alternative to large reservoir-based dams in the renewable energy portfolios of China, India, Canada, and other areas around the globe. RoR projects generate electricity by diverting a portion of the channel discharge through a large pipe for several kilometers downhill where it is used to drive turbines before being returned to the channel. Individual RoR projects are thought to be less disruptive to local ecosystems than large hydropower because they involve minimal water storage, more closely match the natural hydrograph downstream of the project, and are capable of bypassing trapped sediment. However, there is concern that temporary sediment supply disruption may degrade the productivity of salmon spawning habitat downstream of the dam by causing changes in the grain size distribution of bed surface sediment. We hypothesize that salmon populations will be most susceptible to disruptions in sediment supply in channels where; 1) sediment supply is high relative to transport capacity prior to RoR development, and 2) project design creates substantial sediment storage volume. Determining the geomorphic effect of RoR development on aquatic habitat requires many years of field data collection, and even then it can be difficult to link geomorphic change to RoR development alone. As an alternative, we used a one-dimensional morphodynamic model to test our hypothesis across a range of pre-development sediment supply conditions and sediment storage volumes. Our results confirm that coarsening of the median surface grain-size is greatest in cases where pre-development sediment supply was highest and sediment storage volumes were large enough to disrupt supply over the course of the annual hydrograph or longer. In cases where the pre-development sediment supply is low, coarsening of the median surface grain-size is less than 2 mm over a multiple-year disruption period. When sediment supply is restored, our results show that the time required for a channel to re-establish its pre-development median surface grain-size is inversely correlated to the pre-development sediment supply conditions. These results demonstrate that morphodynamic models can be a valuable tool in assessing the risk to aquatic habitat from RoR development.

Riparian vegetation controls on braided stream dynamics

NASA Astrophysics Data System (ADS)

Gran, Karen; Paola, Chris

2001-12-01

Riparian vegetation can significantly influence the morphology of a river, affecting channel geometry and flow dynamics. To examine the effects of riparian vegetation on gravel bed braided streams, we conducted a series of physical experiments at the St. Anthony Falls Laboratory with varying densities of bar and bank vegetation. Water discharge, sediment discharge, and grain size were held constant between runs. For each run, we allowed a braided system to develop, then seeded the flume with alfalfa (Medicago sativa), allowed the seeds to grow, and then continued the run. We collected data on water depth, surface velocity, and bed elevation throughout each run using image-based techniques designed to collect data over a large spatial area with minimal disturbance to the flow. Our results show that the influence of vegetation on overall river patterns varied systematically with the spatial density of plant stems. Vegetation reduced the number of active channels and increased bank stability, leading to lower lateral migration rates, narrower and deeper channels, and increased channel relief. These effects increased with vegetation density. Vegetation influenced flow dynamics, increasing the variance of flow direction in vegetated runs and increasing scour depths through strong downwelling where the flow collided with relatively resistant banks. This oblique bank collision also provides a new mechanism for producing secondary flows. We found it to be more important than the classical curvature-driven mechanism in vegetated runs.

A multi-spectral approach to simultaneously retrieve above-cloud smoke optical depth and the optical and microphysical properties of underlying marine stratocumulus clouds using MODIS

NASA Astrophysics Data System (ADS)

Meyer, K.; Platnick, S. E.; Zhang, Z.

2013-12-01

Clouds, aerosols, and their interactions are widely considered to be key uncertainty components in our current understanding of the Earth's atmosphere and radiation budget. The work presented here is focused on the quasi-permanent marine boundary layer (MBL) clouds over the southeastern Atlantic Ocean, which underlie a near-persistent smoke layer produced from extensive biomass burning throughout the southern African savanna during austral winter. The absorption of the above-cloud smoke layer, which increases with decreasing wavelength, can introduce biases into the standard MODIS cloud optical and microphysical property retrievals of the underlying MBL clouds. This effect is more pronounced in the cloud optical thickness retrievals, which over ocean are derived from the wavelength channel centered near 0.86 μm (effective particle size retrievals are derived from the short and mid-wave IR channels at 1.6, 2.1, and 3.7 μm). Here, a new method is introduced to simultaneously retrieve the above-cloud smoke aerosol optical depth (AOD) and the unbiased cloud optical thickness (COT) and effective radius (CER) using multiple MODIS spectral channels in the visible and near- and shortwave-infrared. Preliminary retrieval results are shown, as are comparisons with other A-Train sensors.

An imager-based multispectral retrieval of above-cloud absorbing aerosol optical depth and the optical and microphysical properties of underlying marine stratocumulus clouds

NASA Astrophysics Data System (ADS)

Meyer, K.; Platnick, S. E.; Zhang, Z.

2014-12-01

Clouds, aerosols, and their interactions are widely considered to be key uncertainty components in our current understanding of the Earth's atmosphere and radiation budget. The work presented here is focused on the quasi-permanent marine boundary layer (MBL) clouds over the southeastern Atlantic Ocean, which underlie a near-persistent smoke layer produced from extensive biomass burning throughout the southern African savanna during austral winter. The absorption of the above-cloud smoke layer, which increases with decreasing wavelength, can introduce biases into imager-based cloud optical and microphysical property retrievals of the underlying MBL clouds. This effect is more pronounced for cloud optical thickness retrievals, which are typically derived from the visible or near-IR wavelength channels (effective particle size retrievals are derived from short and mid-wave IR channels that are less affected by aerosol absorption). Here, a new method is introduced to simultaneously retrieve the above-cloud smoke aerosol optical depth (AOD) and the unbiased cloud optical thickness (COT) and effective radius (CER) using multiple spectral channels in the visible and near- and shortwave-IR. The technique has been applied to MODIS, and retrieval results and statistics, as well as comparisons with other A-Train sensors, are shown.

Membrane shape modulates transmembrane protein distribution.

PubMed

Aimon, Sophie; Callan-Jones, Andrew; Berthaud, Alice; Pinot, Mathieu; Toombes, Gilman E S; Bassereau, Patricia

2014-01-27

Although membrane shape varies greatly throughout the cell, the contribution of membrane curvature to transmembrane protein targeting is unknown because of the numerous sorting mechanisms that take place concurrently in cells. To isolate the effect of membrane shape, we used cell-sized giant unilamellar vesicles (GUVs) containing either the potassium channel KvAP or the water channel AQP0 to form membrane nanotubes with controlled radii. Whereas the AQP0 concentrations in flat and curved membranes were indistinguishable, KvAP was enriched in the tubes, with greater enrichment in more highly curved membranes. Fluorescence recovery after photobleaching measurements showed that both proteins could freely diffuse through the neck between the tube and GUV, and the effect of each protein on membrane shape and stiffness was characterized using a thermodynamic sorting model. This study establishes the importance of membrane shape for targeting transmembrane proteins and provides a method for determining the effective shape and flexibility of membrane proteins. Copyright © 2014 Elsevier Inc. All rights reserved.