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Sample records for charcoal rot disease

  1. Charcoal rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Charcoal rot is reported occasionally on alfalfa in the U.S. and has also been found in Australia, Pakistan, Uganda, east Africa, and the former Soviet Union. The fungus causing the disease is widespread throughout tropical and subtropical countries. It causes disease on more than 500 crop and we...

  2. Potassium and phosphorus effects on disease severity of charcoal rot of soybean

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of potassium (K) and phosphorus (P) fertilizers on charcoal rot of soybean [Glycine max (L.) Merr.] are unknown. Therefore, the severity of charcoal rot was studied at five levels of K (0, 37, 75, 111 and 149 kg K ha-1) and a level that was equal to the recommended fertilizer applicatio...

  3. Potassium and Phosphorus effects on disease severity of charcoal rot of soybean

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of potassium (K) and phosphorus (P) fertilizers on charcoal rot of soybean [Glycine max (L.) Merr.] are unknown. Therefore, the severity of charcoal rot was studied at five levels of K (0, 37, 75, 111 and 149 kg K ha-1) and a level that was equal to the recommended fertilizer applicatio...

  4. Resistance to charcoal rot identified in ancestral soybean germplasm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Charcoal rot, caused by the fungal pathogen Macrophomina phaseolina, is an economically important disease on soybean and other crops including maize, sorghum, and sunflowers. Without effective cultural or chemical options to control charcoal rot in soybean, finding sources of genetic resistance is o...

  5. Evaluation of soybean genotypes for resistance to charcoal rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Charcoal rot caused by Macrophomina phaseolina causes more yield loss in soybean than most other diseases in the southern U.S.A. There are no commercial genotypes marketed as resistant to charcoal rot of soybean. Reactions of 27 maturity group (MG) III, 29 Early MG IV, 34 Late MG IV, and 59 MG V gen...

  6. Nitric oxide production by necrotrophic pathogen Macrophomina phaseolina and the host plant in charcoal rot disease of jute: complexity of the interplay between necrotroph-host plant interactions.

    PubMed

    Sarkar, Tuhin Subhra; Biswas, Pranjal; Ghosh, Subrata Kumar; Ghosh, Sanjay

    2014-01-01

    M. phaseolina, a global devastating necrotrophic fungal pathogen causes charcoal rot disease in more than 500 host plants. With the aim of understanding the plant-necrotrophic pathogen interaction associated with charcoal rot disease of jute, biochemical approach was attempted to study cellular nitric oxide production under diseased condition. This is the first report on M. phaseolina infection in Corchorus capsularis (jute) plants which resulted in elevated nitric oxide, reactive nitrogen species and S nitrosothiols production in infected tissues. Time dependent nitric oxide production was also assessed with 4-Amino-5-Methylamino-2',7'-Difluorofluorescein Diacetate using single leaf experiment both in presence of M. phaseolina and xylanases obtained from fungal secretome. Cellular redox status and redox active enzymes were also assessed during plant fungal interaction. Interestingly, M. phaseolina was found to produce nitric oxide which was detected in vitro inside the mycelium and in the surrounding medium. Addition of mammalian nitric oxide synthase inhibitor could block the nitric oxide production in M. phaseolina. Bioinformatics analysis revealed nitric oxide synthase like sequence with conserved amino acid sequences in M. phaseolina genome sequence. In conclusion, the production of nitric oxide and reactive nitrogen species may have important physiological significance in necrotrophic host pathogen interaction.

  7. Nitric oxide production by necrotrophic pathogen Macrophomina phaseolina and the host plant in charcoal rot disease of jute: complexity of the interplay between necrotroph-host plant interactions.

    PubMed

    Sarkar, Tuhin Subhra; Biswas, Pranjal; Ghosh, Subrata Kumar; Ghosh, Sanjay

    2014-01-01

    M. phaseolina, a global devastating necrotrophic fungal pathogen causes charcoal rot disease in more than 500 host plants. With the aim of understanding the plant-necrotrophic pathogen interaction associated with charcoal rot disease of jute, biochemical approach was attempted to study cellular nitric oxide production under diseased condition. This is the first report on M. phaseolina infection in Corchorus capsularis (jute) plants which resulted in elevated nitric oxide, reactive nitrogen species and S nitrosothiols production in infected tissues. Time dependent nitric oxide production was also assessed with 4-Amino-5-Methylamino-2',7'-Difluorofluorescein Diacetate using single leaf experiment both in presence of M. phaseolina and xylanases obtained from fungal secretome. Cellular redox status and redox active enzymes were also assessed during plant fungal interaction. Interestingly, M. phaseolina was found to produce nitric oxide which was detected in vitro inside the mycelium and in the surrounding medium. Addition of mammalian nitric oxide synthase inhibitor could block the nitric oxide production in M. phaseolina. Bioinformatics analysis revealed nitric oxide synthase like sequence with conserved amino acid sequences in M. phaseolina genome sequence. In conclusion, the production of nitric oxide and reactive nitrogen species may have important physiological significance in necrotrophic host pathogen interaction. PMID:25208092

  8. Effect of anaerobic soil disinfestation and mustard seed meal for control of charcoal rot in California strawberries

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Anaerobic soil disinfestation (ASD) and mustard seed meal (MSM) appear to be promising non-fumigant alternatives for soilborne disease control. However studies of their effect on charcoal rot caused by Macrophomina phaseolina in California strawberry are limited. ASD with rice bran 20 t ha-1 (ASD-RB...

  9. Registration of DT99-16864 soybean germplasm line with moderate resistance to charcoal rot [Macrophomina phaseolina (Tassi) Goid

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Charcoal rot, caused by Macrophomina phaseolina (Tassi) Goidanich, is a disease that is a world-wide problem in soybean production for which no highly resistant cultivars are currently available. Soybean germplasm line DT99-16864, a maturity group V line, was developed by the U.S. Department of Ag...

  10. Suppression of charcoal rot in soybean by moderately halotolerant Pseudomonas aeruginosa GS-33 under saline conditions.

    PubMed

    Patil, Sandeep; Paradeshi, Jayasinh; Chaudhari, Bhushan

    2016-08-01

    Charcoal rot severely limits the soybean crop yield under saline conditions. The present studies focus on biocontrol and plant growth promoting potential of phenazine producing moderately halotolerant Pseudomonas aeruginosa (GS-33) in soybean under saline soil conditions. A marine isolate; GS-33 was identified as P. aeruginosa based on polyphasic characterization. This strain showed potent in vitro biocontrol activity against charcoal rot causing fungus Macrophomina phaseolina. It was capable of producing phenazine-1-carboxylic acid even at elevated salt concentrations. Moreover, GS-33 possessed other biocontrol traits like production of siderophores, HCN and protease under saline conditions. Multiple traits for plant growth promotion such as synthesis of IAA, NH3 , and solubilization of phosphate were also exhibited by GS-33. Plant growth promoting and biocontrol control potentials of GS-33 were evaluated by pot assay under saline soil conditions. Higher biomass and chlorophyll content were observed in GS-33 treated seedlings. A greater reduction in charcoal rot caused by fungal pathogens under both normal and saline soil conditions in GS-33 treated seedlings was observed. In a nut shell, phenazine producing halotolerant strain GS-33 could mitigate saline soil conditions (abiotic stress) and infestation of M. phaseolina (biotic stress) in soybean. PMID:27213894

  11. Evaluation of bacteria isolated from rice rhizosphere for biological control of charcoal rot of sorghum caused by Macrophomina phaseolina (Tassi) Goid.

    PubMed

    Gopalakrishnan, Subramaniam; Humayun, Pagidi; Kiran, Bandru Keerthi; Kannan, Iyer Girish Kumar; Vidya, Meesala Sree; Deepthi, Kanala; Rupela, Om

    2011-06-01

    charcoal rot disease in sorghum. PMID:25187130

  12. Greenhouse evaluation of commercial soybean cultivars adapted to the northern United States for resistance to charcoal rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Thirty (30) and sixty-seven (67) commercially available soybean (Glycine max (L.) Merr) cultivars from Wisconsin (Maturity group (MG) I-II) and Indiana (MG II-III), respectively, were evaluated for charcoal rot (CR; Macrophomina phaseolina (Tassi) Goid) resistance using a cut-stem greenhouse assay. ...

  13. Disease notes - Bacterial root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bacterial root rot initiated by lactic acid bacteria, particularly Leuconostoc, occurs every year in Idaho sugarbeet fields. Hot fall weather seems to make the problem worse. Although Leuconostoc initiates the rot, other bacteria and yeast frequently invade the tissue as well. The acetic acid bac...

  14. Plant growth-promoting rhizobacterial strain-mediated induced systemic resistance in tea (Camellia sinensis (L.) O. Kuntze) through defense-related enzymes against brown root rot and charcoal stump rot.

    PubMed

    Mishra, A K; Morang, P; Deka, M; Nishanth Kumar, S; Dileep Kumar, B S

    2014-09-01

    Induction of systemic resistance in host plants through microbes and their bioactive metabolites are attaining popularity in modern agricultural practices. In this regard, individual application of two strains of Pseudomonas, RRLJ 134 and RRLJ 04, exhibited development of induced systemic resistance in tea plants against brown root rot and charcoal stump rot under split root experiments. The experimental findings also confirmed that the cuttings treated with fungal test pathogen and plant growth-promoting rhizobacteria (PGPR) strains survived longer as compared with pathogen-alone-treated cuttings. The enzyme level studies revealed that the presence of PGPR strains reduced the viscosity loss of cellulose and pectin by both the pathogens to a significant level. The activity of defense-related enzymes like L-phenylalanine ammonia lyase, peroxidase, and polyphenol oxidase were also recorded higher in tea cuttings treated with PGPR strains in presence of pathogen. Crude bioactive metabolites isolated from these strains also showed in vitro antagonism against the test pathogens besides reducing the number of diseased plants under gnotobiotic conditions. These findings confirm the utilization of these two strains for induction of systemic resistance against two major root diseases in tea plants under plantation conditions.

  15. Beneficial effects of fluorescent pseudomonads on seed germination, growth promotion, and suppression of charcoal rot in groundnut (Arachis hypogea L.).

    PubMed

    Shweta, Bhatia; Maheshwari, Dinesh Kumar; Dubey, Ramesh Chand; Arora, Daljit Singh; Bajpai, Vivek K; Kang, Sun Chul

    2008-09-01

    Rhizobacteria are used as inoculants to enhance crop yield and for biological control of fungal pathogens. Fluorescent pseudomonads isolated from the rhizosphere of groundnut showed suppression of the phytopathogen Macrophomina phaseolina that causes charcoal rot of groundnut, an economically important agroproduct. Two strains of fluorescent pseudomonads, designated as PS1 and PS2, were selected as a result of in vitro antifungal activity. After 5 days of incubation at 28+/-1 degrees , both PS1 and PS2 caused clear inhibition zones in dual cultures, restricting the growth of M. phaseolina by 71% and 74%, respectively. Both the strains were capable of producing siderophores, indole acetic acid, and hydrocyanic acid, and causing phosphate solubilization under normal growth conditions. These strains, when used as inoculants in groundnut, enhanced germination up to 15% and 30% with subsequent increase in grain yield by 66% and 77%, respectively. Conversely, when the pathogen alone was testeds 57% decrease in yield was recorded. Thus the studies revealed the potential of the two pseudomonads not only as biocontrol agents against M. phaseolina, but also as a good growth promoter for groundnut. PMID:18852515

  16. Non-fumigant approaches for controlling Fusarium wilt and charcoal rot of strawberry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soilborne disease management without chemical fumigants is a major challenge for strawberry production in California. Current re-registrations and regulations are likely to intensify this obstacle by severely limiting availability of fumigants on a large percentage of strawberry acreage. Anaerobic s...

  17. Rice Sheath Rot: An Emerging Ubiquitous Destructive Disease Complex

    PubMed Central

    Bigirimana, Vincent de P.; Hua, Gia K. H.; Nyamangyoku, Obedi I.; Höfte, Monica

    2015-01-01

    Around one century ago, a rice disease characterized mainly by rotting of sheaths was reported in Taiwan. The causal agent was identified as Acrocylindrium oryzae, later known as Sarocladium oryzae. Since then it has become clear that various other organisms can cause similar disease symptoms, including Fusarium sp. and fluorescent pseudomonads. These organisms have in common that they produce a range of phytotoxins that induce necrosis in plants. The same agents also cause grain discoloration, chaffiness, and sterility and are all seed-transmitted. Rice sheath rot disease symptoms are found in all rice-growing areas of the world. The disease is now getting momentum and is considered as an important emerging rice production threat. The disease can lead to variable yield losses, which can be as high as 85%. This review aims at improving our understanding of the disease etiology of rice sheath rot and mainly deals with the three most reported rice sheath rot pathogens: S. oryzae, the Fusarium fujikuroi complex, and Pseudomonas fuscovaginae. Causal agents, pathogenicity determinants, interactions among the various pathogens, epidemiology, geographical distribution, and control options will be discussed. PMID:26697031

  18. Could charcoal filtration of cigarette smoke reduce smoking-induced disease? A review of the literature.

    PubMed

    Coggins, Christopher R E; Gaworski, Charles L

    2008-04-01

    A review of the published work with charcoal-filtered cigarettes indicates that there are reductions in the concentrations for many gas-vapor phase constituents found in mainstream smoke. However, charcoal filters provided no apparent capacity for reduction of smoke particulate phase components. The reductions in gas-vapor phase smoke chemistry analytes generally correspond with findings of reduced toxicological activity, principally related to a reduction in the cytotoxic action of the volatile smoke constituents. Results of a short-term clinical study show small reductions in the biomarkers of the gas-vapor phase smoke constituents in subjects smoking charcoal-filtered cigarettes, compared to subjects smoking non-charcoal filtered cigarettes. The very limited epidemiology data (a single study) fail to demonstrate a conclusive beneficial effect of charcoal-filtered cigarette products compared to non-charcoal filtered cigarette products. Review of the scientific literature is hindered due to the lack of documentation regarding the activity of the charcoal used in the filter, and the inconsistency in product designs used between the various different disciplines (chemistry, pre-clinical, clinical and epidemiology) that have conducted studies with charcoal filtered cigarettes. There do not appear to be any published studies using a combination of data from the different disciplines based on a consistently designed charcoal cigarette filter. Although the literature presently available would suggest that smoke filtration provided by current charcoal filter techniques alone may not be substantial enough to reduce smoking-related disease, the data are limited. Therefore, for the reduction of smoking-induced disease, it is difficult to come to a definitive conclusion regarding the potential health benefits of using charcoal as a smoke filtration technology. PMID:18289753

  19. QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot.

    PubMed

    Mizobuchi, Ritsuko; Fukuoka, Shuichi; Tsushima, Seiya; Yano, Masahiro; Sato, Hiroyuki

    2016-12-01

    In rice (Oryza sativa L.), damage from diseases such as brown spot, caused by Bipolaris oryzae, and bacterial seedling rot and bacterial grain rot, caused by Burkholderia glumae, has increased under global warming because the optimal temperature ranges for growth of these pathogens are relatively high (around 30 °C). Therefore, the need for cultivars carrying genes for resistance to these diseases is increasing to ensure sustainable rice production. In contrast to the situation for other important rice diseases such as blast and bacterial blight, no genes for complete resistance to brown spot, bacterial seedling rot or bacterial grain rot have yet been discovered. Thus, rice breeders have to use partial resistance, which is largely influenced by environmental conditions. Recent progress in molecular genetics and improvement of evaluation methods for disease resistance have facilitated detection of quantitative trait loci (QTLs) associated with resistance. In this review, we summarize the results of worldwide screening for cultivars with resistance to brown spot, bacterial seedling rot and bacterial grain rot and we discuss the identification of QTLs conferring resistance to these diseases in order to provide useful information for rice breeding programs.

  20. QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot.

    PubMed

    Mizobuchi, Ritsuko; Fukuoka, Shuichi; Tsushima, Seiya; Yano, Masahiro; Sato, Hiroyuki

    2016-12-01

    In rice (Oryza sativa L.), damage from diseases such as brown spot, caused by Bipolaris oryzae, and bacterial seedling rot and bacterial grain rot, caused by Burkholderia glumae, has increased under global warming because the optimal temperature ranges for growth of these pathogens are relatively high (around 30 °C). Therefore, the need for cultivars carrying genes for resistance to these diseases is increasing to ensure sustainable rice production. In contrast to the situation for other important rice diseases such as blast and bacterial blight, no genes for complete resistance to brown spot, bacterial seedling rot or bacterial grain rot have yet been discovered. Thus, rice breeders have to use partial resistance, which is largely influenced by environmental conditions. Recent progress in molecular genetics and improvement of evaluation methods for disease resistance have facilitated detection of quantitative trait loci (QTLs) associated with resistance. In this review, we summarize the results of worldwide screening for cultivars with resistance to brown spot, bacterial seedling rot and bacterial grain rot and we discuss the identification of QTLs conferring resistance to these diseases in order to provide useful information for rice breeding programs. PMID:27178300

  1. Sorghum pathology and biotechnology - A fungal disease perspective: Part II. Anthracnose, stalk rot, and downy mildew

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Foliar diseases and stalk rots are among the most damaging diseases of sorghum in terms of lost production potential, thus commanding considerable research time and expenditure. This review will focus on anthracnose, a fungal disease that causes both foliar symptoms and stalk rots along with the st...

  2. Isolation and identification of allelochemicals produced by B. sonorensis for suppression of charcoal rot of Arachis hypogaea L.

    PubMed

    Pandya, Urja; Saraf, Meenu

    2015-05-01

    Bacillus sonorensis MBCU2 isolated from vermicompost-amended soil from Gujarat, India showed most antagonistic activity against Macrophomina phaseolina by dual culture screening. The culture supernatant of MBCU2 completely suppressed the mycelia growth of pathogen, indicating that suppression was due to the presence of allelochemicals in the culture filtrate. Results of scanning electron microscopy revealed that MBCU2 caused morphological alteration in mycelia of M. phaseolina as evident by hyphal lysis and perforation. Lipopeptides (iturin A and surfactin) produced by MBCU2 were detected and identified by MALDI-TOF-MS as well as liquid chromatography coupled with ESI-MS/MS. Pot trial studies conducted by seed bacterization with MBCU2 resulted in statistically significant increase in Arachis hypogaea L. vegetative growth parameters such as root length (91%), shoot length (252%), fresh weight (71%), dry weight (57%), number of pod (128%), and number of seed (290%) in M. phaseolina infested soil over control as well as decreased M. phaseolina disease severity. We suggest that allelochemicals production can be linked to the mechanism of protection of A. hypogaea L. from M. phaseolina by B. sonorensis MBCU2. PMID:25346523

  3. Activated Charcoal

    MedlinePlus

    ... heat common charcoal in the presence of a gas that causes the charcoal to develop lots of ... charcoal is used to treat poisonings, reduce intestinal gas (flatulence), lower cholesterol levels, prevent hangover, and treat ...

  4. Effect of Chitosan on Rhizome Rot Disease of Turmeric Caused by Pythium aphanidermatum.

    PubMed

    Anusuya, Sathiyanarayanan; Sathiyabama, Muthukrishnan

    2014-01-01

    Chitosan was evaluated for its potential to induce antifungal hydrolases in susceptible turmeric plant (Curcuma longa L.). Under field conditions, the application of chitosan (crab shell) to turmeric plants by foliar spray method induces defense enzymes such as chitinases and chitosanases. Such an increase in enzyme activity was enhanced by spraying chitosan (0.1% w/v) on leaves of turmeric plants at regular intervals. Gel electrophoresis revealed new chitinase and chitosanase isoforms in leaves of turmeric plants treated with chitosan. Treated turmeric plants showed increased resistance towards rhizome rot disease caused by Pythium aphanidermatum, whereas control plants expressed severe rhizome rot disease. Increased activity of defense enzymes in leaves of chitosan treated turmeric plants may play a role in restricting the development of disease symptoms. The eliciting properties of chitosan make chitosan a potential antifungal agent for the control of rhizome rot disease of turmeric.

  5. Indirect selection for resistance to ear rot and leaf diseases in maize lines using biplots.

    PubMed

    Pereira, G S; Camargos, R B; Balestre, M; Von Pinho, R G; C Melo, W M

    2015-09-21

    Leaf disease and ear rot have caused reductions in maize yield in Brazil and other producer countries. Therefore, the aims of this study were to analyze the association between husked ear yield and the severity of maize white spot, gray leaf spot, helminthosporium, and ear rot caused by Fusarium verticillioides and Diplodia maydis using biplots in a mixed-model approach. The responses of 238 lines introduced to Brazil and four controls were evaluated using an incomplete block design with three replicates in two locations: Lavras and Uberlândia, Minas Gerais, Brazil. Two experiments were conducted in each location, one with F. verticillioides and the other with D. maydis. The mixed models elucidated the relationship between yield, leaf disease, and ear disease. Significant genotype x environment and genotype x pathogen interactions were observed. In conclusion, husked ear yield is more associated with ear rot than with the leaf diseases evaluated, justifying the indirect selection for resistance to kernel rot in maize-F. verticillioides and maize-D. maydis pathosystems by yield evaluation.

  6. Foliar application of β-D-glucan nanoparticles to control rhizome rot disease of turmeric.

    PubMed

    Anusuya, Sathiyanarayanan; Sathiyabama, Muthukrishnan

    2015-01-01

    The soilborne Oomycete Pythium aphanidermatum is the causal agent of rhizome rot disease, one of the most serious threats to turmeric crops. At present, effective fungicides are not available. Researches on nanoparticles in a number of crops have evidenced the positive changes in gene expression indicating their potential use in crop improvement. Hence, experiments were carried out to determine the effect of β-D-glucan nanoparticles (nanobiopolymer) in protection of turmeric plants against rot disease by the way of products that reinforce plant's own defense mechanism. Foliar spray of β-D-glucan nanoparticles (0.1%, w/v) elicited marked increase in the activity of defense enzymes such as peroxidases (E.C.1.11.1.7), polyphenol oxidases (E.C.1.14.18.1), protease inhibitors (E.C.3.4.21.1) and β-1,3-glucanases (E.C.3.2.1.39) at various age levels. Constitutive and induced isoforms of these enzymes were investigated during this time-course study. β-D-glucan nanoparticles (GNPs) significantly reduced the rot incidence offering 77% protection. Increased activities of defense enzymes in GNPs-applied turmeric plants may play a role in restricting the development of disease symptoms. These results demonstrated that GNPs could be used as an effective resistance activator in turmeric for control of rhizome rot disease.

  7. Bacterial Antagonists, Zoospore Inoculum Retention Time, and Potato Cultivar Influence Pink Rot Disease Development

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Pink rot of potato, primarily incited by Phytophthora erythroseptica, is a disease of importance in many potato growing regions of the world including North America. The principal mode of entry by the pathogen into tubers in storage is via wounds or eyes; surfaces that theoretically could be protec...

  8. Indirect selection for resistance to ear rot and leaf diseases in maize lines using biplots.

    PubMed

    Pereira, G S; Camargos, R B; Balestre, M; Von Pinho, R G; C Melo, W M

    2015-01-01

    Leaf disease and ear rot have caused reductions in maize yield in Brazil and other producer countries. Therefore, the aims of this study were to analyze the association between husked ear yield and the severity of maize white spot, gray leaf spot, helminthosporium, and ear rot caused by Fusarium verticillioides and Diplodia maydis using biplots in a mixed-model approach. The responses of 238 lines introduced to Brazil and four controls were evaluated using an incomplete block design with three replicates in two locations: Lavras and Uberlândia, Minas Gerais, Brazil. Two experiments were conducted in each location, one with F. verticillioides and the other with D. maydis. The mixed models elucidated the relationship between yield, leaf disease, and ear disease. Significant genotype x environment and genotype x pathogen interactions were observed. In conclusion, husked ear yield is more associated with ear rot than with the leaf diseases evaluated, justifying the indirect selection for resistance to kernel rot in maize-F. verticillioides and maize-D. maydis pathosystems by yield evaluation. PMID:26400335

  9. Survey of Basal Stem Rot Disease on Oil Palms (Elaeis guineensis Jacq.) in Kebun Bukit Kijang,North Sumatera, Indonesia

    NASA Astrophysics Data System (ADS)

    Lisnawita; Hanum, H.; Tantawi, A. R.

    2016-08-01

    Basal stem rot disease caused by Ganoderma sp. is a significant disease on oil palm plantations in Indonesia, especially in North Sumatera. Currently, the pathogen does not only attack the plants that have produced (old plants) but also attacks the plants that have not produced in the first generation yet. A survey of the distribution of the basal stem rot disease in the plantation of the community has been completed in order to illustrate the distribution and the incidence of the basal stem rot disease in 5 locations of the oil palm plantation of the community in Desa Bukit Kijang, Region of Asahan, North Sumatera, Indonesia. From the research, it is revealed that the basal stem rot disease has spread to all of the observed locations with the level of disease incidence between 0.71% in Kebun Bukit Kijang 3 to 50% in the 17 years old oil palm in Kebun Bukit Kijang 4 and Bukit Kijang 5. The observable symptoms of the basal stem rot disease are chlorotic leaves, the appearance of fruiting body, collapsed plants, and the existence of holes on the basal stem. The incidence of basal stem rot disease is higher on land due to a high sand content (>50%).

  10. Bud Rot Caused by Phytophthora palmivora: A Destructive Emerging Disease of Oil Palm.

    PubMed

    Torres, G A; Sarria, G A; Martinez, G; Varon, F; Drenth, A; Guest, D I

    2016-04-01

    Oomycetes from the genus Phytophthora are among the most important plant pathogens in agriculture. Epidemics caused by P. infestans precipitated the great Irish famine and had a major impact on society and human history. In the tropics, P. palmivora is a pathogen of many plant species including cacao (Theobroma cacao), citrus (Citrus sp.), durian (Durio zibethines), jackfruit (Artrocarpus heterophyllus), rubber (Hevea brasiliensis), and several palm species including coconut (Cocos nucifera), and the African oil palm (Elaeis guineensis) as determined recently. The first localized epidemics of bud rot in oil palm in Colombia were reported in 1964. However, recent epidemics of bud rot have destroyed more than 70,000 ha of oil palm in the Western and Central oil palm growing regions of Colombia. The agricultural, social, and economic implications of these outbreaks have been significant in Colombia. Identification of the pathogen after 100 years of investigating the disease in the world enabled further understanding of infection, expression of a range of symptoms, and epidemiology of the disease. This review examines the identification of P. palmivora as the cause of bud rot in Colombia, its epidemiology, and discusses the importance of P. palmivora as a major threat to oil palm plantings globally.

  11. Bud Rot Caused by Phytophthora palmivora: A Destructive Emerging Disease of Oil Palm.

    PubMed

    Torres, G A; Sarria, G A; Martinez, G; Varon, F; Drenth, A; Guest, D I

    2016-04-01

    Oomycetes from the genus Phytophthora are among the most important plant pathogens in agriculture. Epidemics caused by P. infestans precipitated the great Irish famine and had a major impact on society and human history. In the tropics, P. palmivora is a pathogen of many plant species including cacao (Theobroma cacao), citrus (Citrus sp.), durian (Durio zibethines), jackfruit (Artrocarpus heterophyllus), rubber (Hevea brasiliensis), and several palm species including coconut (Cocos nucifera), and the African oil palm (Elaeis guineensis) as determined recently. The first localized epidemics of bud rot in oil palm in Colombia were reported in 1964. However, recent epidemics of bud rot have destroyed more than 70,000 ha of oil palm in the Western and Central oil palm growing regions of Colombia. The agricultural, social, and economic implications of these outbreaks have been significant in Colombia. Identification of the pathogen after 100 years of investigating the disease in the world enabled further understanding of infection, expression of a range of symptoms, and epidemiology of the disease. This review examines the identification of P. palmivora as the cause of bud rot in Colombia, its epidemiology, and discusses the importance of P. palmivora as a major threat to oil palm plantings globally. PMID:26714102

  12. Charcoal burner

    SciTech Connect

    Bakic, M.C.

    1988-12-27

    A combustible fuel apparatus is described comprising: side walls formed contiguous with and extending upward from a base and converging to form a closed container, having stacked charcoal fuel particles therein. The base may be placed directly on a substantially horizontal surface and the container may be ignited and substantially burned to ash, and the charcoal fuel particles may be ignited and sufficiently burned for cooking, wherein the charcoal fuel particles are stacked on the base in a relatively stable position prior to the igniting of the container, and are maintained in a relatively stable position during and after the igniting and burning of the container, whereby a mound of ignited charcoal fuel particles remains on the substantially horizontal surface after the burning of the container, the mound having a configuration substantially similar to the shape of the container prior to the combustion thereof.

  13. Management of corm-rot disease of Gladiolus by plant extracts.

    PubMed

    Riaz, Tariq; Nawaz Khan, Salik; Javaid, Arshad

    2010-07-01

    A pot experiment was conducted to evaluate the efficacy of aqueous extracts of six plant species, namely Azadirachta indica A. Juss. (neem), Alstonia scholaris (L.) R. Br., Lawsonia alba Lam., Allium cepa L., A. sativum L. and Zingiber officinale Roscoe, and a systemic fungicide carbendazim 50% (w/w) WP, to manage the corm-rot disease of Gladiolus (Gladiolus grandiflorus L.) caused by a fungal pathogen Fusarium oxysporum f.sp. gladioli (Massey) Snyd. & Hans. Fusarium inoculation showed 80% disease incidence with 54 disease lesions per corm. Recommended dose of the chemical fungicide carbendazim significantly reduced the disease incidence to 13% and number of lesions to six per corm. Plant extract treatments exhibited variable effects on the incidence and severity of the disease. In general, all the test plant extracts managed the corm-rot disease to some extent. Aqueous bulb extracts of A. sativum and A. cepa and the rhizome extract of Z. officinale showed better disease management potential than that of the recommended dose of carbendazim. Fusarium inoculation significantly declined shoot growth. In general, carbendazim, as well as aqueous extracts, enhanced shoot growth to variable extents as compared to the Fusarium control. PMID:19557652

  14. Pea Disease Diagnostic Series- Rhizoctonia seed, seedling and root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Pea disease diagnostic cards that growers can carry with them into the field that are water resistant and durable which can be used to identify the signs and symptoms of major pea pathogens were developed. Color photographs of major fungal, bacterial, and viral pathogens on peas and a brief descript...

  15. Interactions Between the Bud Rot Disease of Oil Palm and Rhynchophorus palmarum (Coleoptera: Curculionidae).

    PubMed

    Plata-Rueda, Angelica; Martínez, Luis Carlos; Fernandes, Flávio Lemes; de Sousa Ramalho, Francisco; Zanuncio, José Cola; Serrão, José Eduardo

    2016-04-01

    Rhynchophorus palmarum (L.) causes great losses to the oil palm plantations, and therefore, the spatial and temporal distribution of this insect should be studied, to manage its populations. Insect sampling was done for 2 yr in an oil palm plantation from Colombia. In total, 60 pheromone traps were used in healthy palm trees and infected ones with the Bud Rot disease. On the other hand, developmental stages of this insect were quantified on healthy and diseased palms for two consecutive years. Number of adult R. palmarum per sampling was higher in the plantation with diseased palm trees, 3.85 and 74.7 insects per trap, than in those with healthy ones, 1.91 and 9.48 insects per trap, in the first and second years, respectively. After the integration of pheromone traps, there was a significant increase in the infestation level at all stages of development of the insect. For the first time, the presence of R. palmarum attracted to diseased palms is reported. The association between R. palmarum and the Bud Rot disease is a cause of death and great loss to the oil palm plantations.

  16. The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan.

    PubMed

    Chung, Chia-Lin; Huang, Shun-Yuan; Huang, Yu-Ching; Tzean, Shean-Shong; Ann, Pao-Jen; Tsai, Jyh-Nong; Yang, Chin-Cheng; Lee, Hsin-Han; Huang, Tzu-Wei; Huang, Hsin-Yu; Chang, Tun-Tschu; Lee, Hui-Lin; Liou, Ruey-Fen

    2015-01-01

    Since the 1990s, brown root rot caused by Phellinus noxius (Corner) Cunningham has become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 hardwood and softwood tree species, causing gradual to fast decline of the trees. For effective control, we must determine how the pathogen is disseminated and how the new infection center of brown root rot is established. We performed Illumina sequencing and de novo assembly of a single basidiospore isolate Daxi42 and obtained a draft genome of ~40 Mb. By comparing the 12,217 simple sequence repeat (SSR) regions in Daxi42 with the low-coverage Illumina sequencing data for four additional P. noxius isolates, we identified 154 SSR regions with potential polymorphisms. A set of 13 polymorphic SSR markers were then developed and used to analyze 329 P. noxius isolates collected from 73 tree species from urban/agricultural areas in 14 cities/counties all around Taiwan from 1989 to 2012. The results revealed a high proportion (~98%) of distinct multilocus genotypes (MLGs) and that none of the 329 isolates were genome-wide homozygous, which supports a possible predominant outcrossing reproductive mode in P. noxius. The diverse MLGs exist as discrete patches, so brown root rot was most likely caused by multiple clones rather than a single predominant strain. The isolates collected from diseased trees near each other tend to have similar genotype(s), which indicates that P. noxius may spread to adjacent trees via root-to-root contact. Analyses based on Bayesian clustering, FST statistics, analysis of molecular variance, and isolation by distance all suggest a low degree of population differentiation and little to no barrier to gene flow throughout the P. noxius population in Taiwan. We discuss the involvement of basidiospore dispersal in disease dissemination. PMID:26485142

  17. The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan.

    PubMed

    Chung, Chia-Lin; Huang, Shun-Yuan; Huang, Yu-Ching; Tzean, Shean-Shong; Ann, Pao-Jen; Tsai, Jyh-Nong; Yang, Chin-Cheng; Lee, Hsin-Han; Huang, Tzu-Wei; Huang, Hsin-Yu; Chang, Tun-Tschu; Lee, Hui-Lin; Liou, Ruey-Fen

    2015-01-01

    Since the 1990s, brown root rot caused by Phellinus noxius (Corner) Cunningham has become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 hardwood and softwood tree species, causing gradual to fast decline of the trees. For effective control, we must determine how the pathogen is disseminated and how the new infection center of brown root rot is established. We performed Illumina sequencing and de novo assembly of a single basidiospore isolate Daxi42 and obtained a draft genome of ~40 Mb. By comparing the 12,217 simple sequence repeat (SSR) regions in Daxi42 with the low-coverage Illumina sequencing data for four additional P. noxius isolates, we identified 154 SSR regions with potential polymorphisms. A set of 13 polymorphic SSR markers were then developed and used to analyze 329 P. noxius isolates collected from 73 tree species from urban/agricultural areas in 14 cities/counties all around Taiwan from 1989 to 2012. The results revealed a high proportion (~98%) of distinct multilocus genotypes (MLGs) and that none of the 329 isolates were genome-wide homozygous, which supports a possible predominant outcrossing reproductive mode in P. noxius. The diverse MLGs exist as discrete patches, so brown root rot was most likely caused by multiple clones rather than a single predominant strain. The isolates collected from diseased trees near each other tend to have similar genotype(s), which indicates that P. noxius may spread to adjacent trees via root-to-root contact. Analyses based on Bayesian clustering, FST statistics, analysis of molecular variance, and isolation by distance all suggest a low degree of population differentiation and little to no barrier to gene flow throughout the P. noxius population in Taiwan. We discuss the involvement of basidiospore dispersal in disease dissemination.

  18. The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan

    PubMed Central

    Chung, Chia-Lin; Huang, Shun-Yuan; Huang, Yu-Ching; Tzean, Shean-Shong; Ann, Pao-Jen; Tsai, Jyh-Nong; Yang, Chin-Cheng; Lee, Hsin-Han; Huang, Tzu-Wei; Huang, Hsin-Yu; Chang, Tun-Tschu; Lee, Hui-Lin; Liou, Ruey-Fen

    2015-01-01

    Since the 1990s, brown root rot caused by Phellinus noxius (Corner) Cunningham has become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 hardwood and softwood tree species, causing gradual to fast decline of the trees. For effective control, we must determine how the pathogen is disseminated and how the new infection center of brown root rot is established. We performed Illumina sequencing and de novo assembly of a single basidiospore isolate Daxi42 and obtained a draft genome of ~40 Mb. By comparing the 12,217 simple sequence repeat (SSR) regions in Daxi42 with the low-coverage Illumina sequencing data for four additional P. noxius isolates, we identified 154 SSR regions with potential polymorphisms. A set of 13 polymorphic SSR markers were then developed and used to analyze 329 P. noxius isolates collected from 73 tree species from urban/agricultural areas in 14 cities/counties all around Taiwan from 1989 to 2012. The results revealed a high proportion (~98%) of distinct multilocus genotypes (MLGs) and that none of the 329 isolates were genome-wide homozygous, which supports a possible predominant outcrossing reproductive mode in P. noxius. The diverse MLGs exist as discrete patches, so brown root rot was most likely caused by multiple clones rather than a single predominant strain. The isolates collected from diseased trees near each other tend to have similar genotype(s), which indicates that P. noxius may spread to adjacent trees via root-to-root contact. Analyses based on Bayesian clustering, FST statistics, analysis of molecular variance, and isolation by distance all suggest a low degree of population differentiation and little to no barrier to gene flow throughout the P. noxius population in Taiwan. We discuss the involvement of basidiospore dispersal in disease dissemination. PMID:26485142

  19. Corky root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Corky root rot (corchosis) was first reported in Argentina in 1985, but the disease was presumably present long before that. The disease occurs in most alfalfa-growing areas of Argentina but is more common in older stands. In space-planted alfalfa trials scored for root problems, corky root rot was ...

  20. A survey of pre-harvest ear rot diseases of maize and associated mycotoxins in south and central Zambia.

    PubMed

    Mukanga, Mweshi; Derera, John; Tongoona, Pangirayi; Laing, Mark D

    2010-07-15

    Maize ear rots reduce grain yield and quality with implication on food security and health. Some of the pathogenic fungi produce mycotoxins in maize grain posing a health risk to humans and livestock. Unfortunately, the levels of ear rot and mycotoxin infection in grain produced by subsistence farmers in sub-Saharan countries are not known. A survey was thus conducted to determine the prevalence of the ear rot problem and levels of mycotoxins in maize grain. A total of 114 farmsteads were randomly sampled from 11 districts in Lusaka and southern provinces in Zambia during 2006. Ten randomly picked cobs were examined per farmstead and the ear rot disease incidence and severity were estimated on site. This was followed by the standard seed health testing procedures for fungal isolation in the laboratory. Results indicated that the dominant ear rots were caused by Fusarium and Stenocarpella. Incidence of Fusarium verticillioides ranged from 2 to 21%, whereas that of Stenocarpella maydis reached 37% on ear rot diseased maize grain. In addition, 2-7% F. verticillioides, and 3-18% Aspergillus flavus, respectively, were recovered from seemingly healthy maize grain. The mean rank of fungal species, from highest to lowest, was F. verticillioides, S. maydis, A. flavus, Fusarium graminearum, Aspergillus niger, Penicillium spp., Botrydiplodia spp., and Cladosporium spp. The direct competitive ELISA-test indicated higher levels of fumonisins than aflatoxins in pre-harvest maize grain samples. The concentration of fumonisins from six districts, and aflatoxin from two districts, was 10-fold higher than 2 ppm and far higher than 2 ppb maximum daily intake recommended by the FAO/WHO. The study therefore suggested that subsistence farmers and consumers in this part of Zambia, and maybe also in similar environments in sub-Saharan Africa, might be exposed to dangerous levels of mycotoxins due to the high levels of ear rot infections in maize grain.

  1. Analysis of Yeast Flora Associated with Grape Sour Rot and of the Chemical Disease Markers

    PubMed Central

    Guerzoni, Elisabetta; Marchetti, Rosa

    1987-01-01

    The frequency and the density of the species associated with grape sour rot in different cultivars were determined. The most frequent species in the rotten grapes, Candida krusei, Kloeckera apiculata, and Metschnikowia pulcherrima, and a less frequent species, Issatchenkia occidentalis, when inoculated with Saccharomycopsis crataegensis were able to induce in vitro the symptoms of the disease. The gas chromatographic determination of the volatile compounds in the headspace was used to evaluate the metabolic role of the different species associated with the disease. These analyses made it possible to presume that, whereas some species, such as Candida krusei and Hanseniaspora uvarum, can be considered responsible for these modifications and in particular for the ethyl acetate production, others, such as Saccharomycopsis crataegensis, can promote the development of the former species. PMID:16347305

  2. Genome-Wide Association Study on Resistance to Stalk Rot Diseases in Grain Sorghum.

    PubMed

    Adeyanju, Adedayo; Little, Christopher; Yu, Jianming; Tesso, Tesfaye

    2015-06-01

    Stalk rots are important biotic constraints to sorghum production worldwide. Several pathogens may be associated with the disease, but Macrophomina phaseolina and Fusarium thapsinum are recognized as the major causal organisms. The diseases become more aggressive when drought and high-temperature stress occur during grain filling. Progress in genetic improvement efforts has been slow due to lack of effective phenotyping protocol and the strong environmental effect on disease incidence and severity. Deployment of modern molecular tools is expected to accelerate efforts to develop resistant hybrids. This study was aimed at identifying genomic regions associated with resistance to both causal organisms. A sorghum diversity panel consisting of 300 genotypes assembled from different parts of the world was evaluated for response to infection by both pathogens. Community resources of 79,132 single nucleotide polymorphic (SNP) markers developed on the panel were used in association studies using a multi-locus mixed model to map loci associated with stalk rot resistance. Adequate genetic variation was observed for resistance to both pathogens. Structure analysis grouped the genotypes into five subpopulations primarily based on the racial category of the genotypes. Fourteen loci and a set of candidate genes appear to be involved in connected functions controlling plant defense response. However, each associated SNP had relatively small effect on the traits, accounting for 19-30% of phenotypic variation. Linkage disequilibrium analyses suggest that significant SNPs are genetically independent. Estimation of frequencies of associated alleles revealed that durra and caudatum subpopulations were enriched for resistant alleles, but the results suggest complex molecular mechanisms underlying resistance to both pathogens. PMID:25882062

  3. Genome-Wide Association Study on Resistance to Stalk Rot Diseases in Grain Sorghum

    PubMed Central

    Adeyanju, Adedayo; Little, Christopher; Yu, Jianming; Tesso, Tesfaye

    2015-01-01

    Stalk rots are important biotic constraints to sorghum production worldwide. Several pathogens may be associated with the disease, but Macrophomina phaseolina and Fusarium thapsinum are recognized as the major causal organisms. The diseases become more aggressive when drought and high-temperature stress occur during grain filling. Progress in genetic improvement efforts has been slow due to lack of effective phenotyping protocol and the strong environmental effect on disease incidence and severity. Deployment of modern molecular tools is expected to accelerate efforts to develop resistant hybrids. This study was aimed at identifying genomic regions associated with resistance to both causal organisms. A sorghum diversity panel consisting of 300 genotypes assembled from different parts of the world was evaluated for response to infection by both pathogens. Community resources of 79,132 single nucleotide polymorphic (SNP) markers developed on the panel were used in association studies using a multi-locus mixed model to map loci associated with stalk rot resistance. Adequate genetic variation was observed for resistance to both pathogens. Structure analysis grouped the genotypes into five subpopulations primarily based on the racial category of the genotypes. Fourteen loci and a set of candidate genes appear to be involved in connected functions controlling plant defense response. However, each associated SNP had relatively small effect on the traits, accounting for 19–30% of phenotypic variation. Linkage disequilibrium analyses suggest that significant SNPs are genetically independent. Estimation of frequencies of associated alleles revealed that durra and caudatum subpopulations were enriched for resistant alleles, but the results suggest complex molecular mechanisms underlying resistance to both pathogens. PMID:25882062

  4. Genome-Wide Association Study on Resistance to Stalk Rot Diseases in Grain Sorghum.

    PubMed

    Adeyanju, Adedayo; Little, Christopher; Yu, Jianming; Tesso, Tesfaye

    2015-04-16

    Stalk rots are important biotic constraints to sorghum production worldwide. Several pathogens may be associated with the disease, but Macrophomina phaseolina and Fusarium thapsinum are recognized as the major causal organisms. The diseases become more aggressive when drought and high-temperature stress occur during grain filling. Progress in genetic improvement efforts has been slow due to lack of effective phenotyping protocol and the strong environmental effect on disease incidence and severity. Deployment of modern molecular tools is expected to accelerate efforts to develop resistant hybrids. This study was aimed at identifying genomic regions associated with resistance to both causal organisms. A sorghum diversity panel consisting of 300 genotypes assembled from different parts of the world was evaluated for response to infection by both pathogens. Community resources of 79,132 single nucleotide polymorphic (SNP) markers developed on the panel were used in association studies using a multi-locus mixed model to map loci associated with stalk rot resistance. Adequate genetic variation was observed for resistance to both pathogens. Structure analysis grouped the genotypes into five subpopulations primarily based on the racial category of the genotypes. Fourteen loci and a set of candidate genes appear to be involved in connected functions controlling plant defense response. However, each associated SNP had relatively small effect on the traits, accounting for 19-30% of phenotypic variation. Linkage disequilibrium analyses suggest that significant SNPs are genetically independent. Estimation of frequencies of associated alleles revealed that durra and caudatum subpopulations were enriched for resistant alleles, but the results suggest complex molecular mechanisms underlying resistance to both pathogens.

  5. Enhancement of tolerance to soft rot disease in the transgenic Chinese cabbage (Brassica rapa L. ssp. pekinensis) inbred line, Kenshin.

    PubMed

    Vanjildorj, Enkhchimeg; Song, Seo Young; Yang, Zhi Hong; Choi, Jae Eul; Noh, Yoo Sun; Park, Suhyoung; Lim, Woo Jin; Cho, Kye Man; Yun, Han Dae; Lim, Yong Pyo

    2009-10-01

    We developed a transgenic Chinese cabbage (Brassica rapa L. ssp. pekinensis) inbred line, Kenshin, with high tolerance to soft rot disease. Tolerance was conferred by expression of N-acyl-homoserine lactonase (AHL-lactonase) in Chinese cabbage through an efficient Agrobacterium-mediated transformation method. To synthesize and express the AHL-lactonase in Chinese cabbage, the plant was transformed with the aii gene (AHL-lactonase gene from Bacillus sp. GH02) fused to the PinII signal peptide (protease inhibitor II from potato). Five transgenic lines were selected by growth on hygromycin-containing medium (3.7% transformation efficiency). Southern blot analysis showed that the transgene was stably integrated into the genome. Among these five transgenic lines, single copy number integrations were observed in four lines and a double copy number integration was observed in one transgenic line. Northern blot analysis confirmed that pinIISP-aii fusion gene was expressed in all the transgenic lines. Soft rot disease tolerance was evaluated at tissue and seedling stage. Transgenic plants showed a significantly enhanced tolerance (2-3-fold) to soft rot disease compared to wild-type plants. Thus, expression of the fusion gene pinIISP-aii reduces susceptibility to soft rot disease in Chinese cabbage. We conclude that the recombinant AHL-lactonase, encoded by aii, can effectively quench bacterial quorum-sensing and prevent bacterial population density-dependent infections. To the best of our knowledge, the present study is the first to demonstrate the transformation of Chinese cabbage inbred line Kenshin, and the first to describe the effect of the fusion gene pinIISP-aii on enhancement of soft rot disease tolerance.

  6. The expansion of brown rot disease throughout Bolivia: possible role of climate change.

    PubMed

    Castillo, José Antonio; Plata, Giovanna

    2016-05-01

    Bacterial wilt is a devastating plant disease caused by the bacterial pathogen Ralstonia solanacearum species complex and affects different crops. Bacterial wilt infecting potato is also known as brown rot (BR) and is responsible for significant economic losses in potato production, especially in developing countries. In Bolivia, BR affects up to 75% of the potato crop in areas with high incidence and 100% of stored potatoes. The disease has disseminated since its introduction to the country in the mid-1980s mostly through contaminated seed tubers. To avoid this, local farmers multiply seed tubers in highlands because the strain infecting potatoes cannot survive near-freezing temperatures that are typical in the high mountains. Past disease surveys have shown an increase in seed tubers with latent infection in areas at altitudes lower than 3000 m a.s.l. Since global warming is increasing in the Andes Mountains, in this work, we explored the incidence of BR in areas at altitudes above 3000 m a.s.l. Results showed BR presence in the majority of these areas, suggesting a correlation between the increase in disease incidence and the increase in temperature and the number of irregular weather events resulting from climate change. However, it cannot be excluded that the increasing availability of latently infected seed tubers has boosted the spread of BR.

  7. The expansion of brown rot disease throughout Bolivia: possible role of climate change.

    PubMed

    Castillo, José Antonio; Plata, Giovanna

    2016-05-01

    Bacterial wilt is a devastating plant disease caused by the bacterial pathogen Ralstonia solanacearum species complex and affects different crops. Bacterial wilt infecting potato is also known as brown rot (BR) and is responsible for significant economic losses in potato production, especially in developing countries. In Bolivia, BR affects up to 75% of the potato crop in areas with high incidence and 100% of stored potatoes. The disease has disseminated since its introduction to the country in the mid-1980s mostly through contaminated seed tubers. To avoid this, local farmers multiply seed tubers in highlands because the strain infecting potatoes cannot survive near-freezing temperatures that are typical in the high mountains. Past disease surveys have shown an increase in seed tubers with latent infection in areas at altitudes lower than 3000 m a.s.l. Since global warming is increasing in the Andes Mountains, in this work, we explored the incidence of BR in areas at altitudes above 3000 m a.s.l. Results showed BR presence in the majority of these areas, suggesting a correlation between the increase in disease incidence and the increase in temperature and the number of irregular weather events resulting from climate change. However, it cannot be excluded that the increasing availability of latently infected seed tubers has boosted the spread of BR. PMID:26991236

  8. Optimal fertilizer application for Panax notoginseng and effect of soil water on root rot disease and saponin contents

    PubMed Central

    Xia, Pengguo; Guo, Hongbo; Zhao, Hongguang; Jiao, Jie; Deyholos, Michael K.; Yan, Xijun; Liu, Yan; Liang, Zongsuo

    2015-01-01

    Background Blind and excessive application of fertilizers was found during the cultivation of Panax notoginseng in fields, as well as increase in root rot disease incidence. Methods Both “3414” application and orthogonal test designs were performed at Shilin county, Yunnan province, China, for NPK (nitrogen, phosphorus, and potassium) and mineral fertilizers, respectively. The data were used to construct the one-, two-, and three-factor quadratic regression models. The effect of fertilizer deficiency on root yield loss was also analyzed to confirm the result predicted by these models. A pot culture experiment was performed to observe the incidence rate of root rot disease and to obtain the best range in which the highest yield of root and saponins could be realized. Results The best application strategy for NPK fertilizer was 0 kg/667 m2, 17.01 kg/667 m2, and 56.87 kg/667 m2, respectively, which can produce the highest root yield of 1,861.90 g (dried root of 100 plants). For mineral fertilizers, calcium and magnesium fertilizers had a significant and positive effect on root yield and the content of four active saponins, respectively. The severity of root rot disease increased with the increase in soil moisture. The best range of soil moisture varied from 0.56 FC (field capacity of water) to 0.59 FC, when the highest yield of root and saponins could be realized as well as the lower incidence rate of root disease. Conclusion These results indicate that the amount of nitrogen fertilizer used in these fields is excessive and that of potassium fertilizer is deficient. Higher soil moisture is an important factor that increases the severity of the root rot disease. PMID:26843820

  9. GmPGIP3 enhanced resistance to both take-all and common root rot diseases in transgenic wheat.

    PubMed

    Wang, Aiyun; Wei, Xuening; Rong, Wei; Dang, Liang; Du, Li-Pu; Qi, Lin; Xu, Hui-Jun; Shao, Yanjun; Zhang, Zengyan

    2015-05-01

    Take-all (caused by the fungal pathogen Gaeumannomyces graminis var. tritici, Ggt) and common root rot (caused by Bipolaris sorokiniana) are devastating root diseases of wheat (Triticum aestivum L.). Development of resistant wheat cultivars has been a challenge since no resistant wheat accession is available. GmPGIP3, one member of polygalacturonase-inhibiting protein (PGIP) family in soybean (Glycine max), exhibited inhibition activity against fungal endopolygalacturonases (PGs) in vitro. In this study, the GmPGIP3 transgenic wheat plants were generated and used to assess the effectiveness of GmPGIP3 in protecting wheat from the infection of Ggt and B. sorokiniana. Four independent transgenic lines were identified by genomic PCR, Southern blot, and reverse transcription PCR (RT-PCR). The introduced GmPGIP3 was integrated into the genomes of these transgenic lines and could be expressed. The expressing GmPGIP3 protein in these transgenic wheat lines could inhibit the PGs produced by Ggt and B. sorokiniana. The disease response assessments postinoculation showed that the GmPGIP3-expressing transgenic wheat lines displayed significantly enhanced resistance to both take-all and common root rot diseases caused by the infection of Ggt and B. sorokiniana. These data suggested that GmPGIP3 is an attractive gene resource in improving resistance to both take-all and common root rot diseases in wheat.

  10. Rhamnolipid Biosurfactant against Fusarium verticillioides to Control Stalk and Ear Rot Disease of Maize

    PubMed Central

    Borah, Siddhartha N.; Goswami, Debahuti; Sarma, Hridip K.; Cameotra, Swaranjit S.; Deka, Suresh

    2016-01-01

    Antifungal activity of rhamnolipids (RLs) has been widely studied against many plant pathogenic fungi, but not against Fusarium verticillioides, a major pathogen of maize (Zea mays L.). F. verticillioides causes stalk and ear rot of maize or asymptomatically colonizes the plant and ears resulting in moderate to heavy crop loss throughout the world. F. verticillioides produces fumonisin mycotoxins, reported carcinogens, which makes the contaminated ears unsuitable for consumption. In this study, the RL produced using glucose as sole carbon source was characterized by FTIR and LCMS analyses and its antifungal activity against F. verticillioides was evaluated in vitro on maize stalks and seeds. Further, the effect of RL on the mycelia of F. verticillioides was investigated by scanning electron microscopy which revealed visible damage to the mycelial structure as compared to control samples. In planta, treatment of maize seeds with a RL concentration of 50 mg l-1 resulted in improved biomass and fruiting compared to those of healthy control plants and complete suppression of characteristic disease symptoms and colonization of maize by F. verticillioides. The study highlights the potential of RLs to be used for an effective biocontrol strategy against colonization of maize plant by F. verticillioides. PMID:27708638

  11. Biocontrol of the Potato Blackleg and Soft Rot Diseases Caused by Dickeya dianthicola

    PubMed Central

    Raoul des Essarts, Yannick; Cigna, Jérémy; Quêtu-Laurent, Angélique; Caron, Aline; Munier, Euphrasie; Beury-Cirou, Amélie

    2015-01-01

    Development of protection tools targeting Dickeya species is an important issue in the potato production. Here, we present the identification and the characterization of novel biocontrol agents. Successive screenings of 10,000 bacterial isolates led us to retain 58 strains that exhibited growth inhibition properties against several Dickeya sp. and/or Pectobacterium sp. pathogens. Most of them belonged to the Pseudomonas and Bacillus genera. In vitro assays revealed a fitness decrease of the tested Dickeya sp. and Pectobacterium sp. pathogens in the presence of the biocontrol agents. In addition, four independent greenhouse assays performed to evaluate the biocontrol bacteria effect on potato plants artificially contaminated with Dickeya dianthicola revealed that a mix of three biocontrol agents, namely, Pseudomonas putida PA14H7 and Pseudomonas fluorescens PA3G8 and PA4C2, repeatedly decreased the severity of blackleg symptoms as well as the transmission of D. dianthicola to the tuber progeny. This work highlights the use of a combination of biocontrol strains as a potential strategy to limit the soft rot and blackleg diseases caused by D. dianthicola on potato plants and tubers. PMID:26497457

  12. Protection of turmeric plants from rhizome rot disease under field conditions by β-D-glucan nanoparticle.

    PubMed

    Anusuya, Sathiyanarayanan; Sathiyabama, Muthukrishnan

    2015-01-01

    The rhizome rot caused by Pythium aphanidermatum is one of the most devastating diseases of the turmeric crop. Fungicides are unable to control the rapidly evolving P. aphanidermatum and new control strategies are urgently needed. This study examined the effect of β-d-glucan nanoparticles (GNP) in turmeric plants under field condition by the foliar spray method. Enhanced plant growth, rhizome yield, and curcumin content demonstrate the positive effect of the GNP on turmeric plants. Rapid activation of various defense enzymes was also observed in leaves and rhizomes of treated plants. GNP-treated plants showed a decreased rot incidence. It may be possible that increased defense enzymes might have played a role in reducing the colonization of pathogen.

  13. Soybean (Glycine max L. Merr.) Sprouts Germinated under Red Light Irradiation Induce Disease Resistance against Bacterial Rotting Disease

    PubMed Central

    Dhakal, Radhika; Park, Euiho; Lee, Se-Weon; Baek, Kwang-Hyun

    2015-01-01

    Specific wavelengths of light can exert various physiological changes in plants, including effects on responses to disease incidence. To determine whether specific light wavelength had effects on rotting disease caused by Pseudomonas putida 229, soybean sprouts were germinated under a narrow range of wavelengths from light emitting diodes (LEDs), including red (650–660), far red (720–730) and blue (440–450 nm) or broad range of wavelength from daylight fluorescence bulbs. The controls were composed of soybean sprouts germinated in darkness. After germination under different conditions for 5 days, the soybean sprouts were inoculated with P. putida 229 and the disease incidence was observed for 5 days. The sprouts exposed to red light showed increased resistance against P. putida 229 relative to those grown under other conditions. Soybean sprouts germinated under red light accumulated high levels of salicylic acid (SA) accompanied with up-regulation of the biosynthetic gene ICS and the pathogenesis- related (PR) gene PR-1, indicating that the resistance was induced by the action of SA via de novo synthesis of SA in the soybean sprouts by red light irradiation. Taken together, these data suggest that only the narrow range of red light can induce disease resistance in soybean sprouts, regulated by the SA-dependent pathway via the de novo synthesis of SA and up-regulation of PR genes. PMID:25679808

  14. Evaluation of soybean genotypes for resistance to three seed borne diseases

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Seed-borne diseases of soybeans caused by Phomopsis longicolla (Phomopsis seed decay), Cercospora kukuchii (purple seed stain), and M. phaseolina (charcoal rot) are economically important seed-borne diseases that affect seed quality. Commercial cultivars marketed as resistant to all the three disea...

  15. Biological control of collar rot disease with broad-spectrum antifungal bacteria associated with groundnut.

    PubMed

    Kishore, G Krishna; Pande, S; Podile, A R

    2005-02-01

    Bacteria associated with 6 habitats of groundnut were evaluated for their broad-spectrum antifungal activity and suppression of collar rot (Aspergillus niger) of groundnut. Three hundred and ninety-three strains were tested against 8 fungal pathogens of groundnut including 5 necrotrophic fungi, Aspergillus flavus, A. niger, Rhizoctonia bataticola, Rhizoctonia solani, and Sclerotium rolfsii, and 3 biotrophic fungi, Cercospora arachidicola, Phaeoisariopsis personata, and Puccinia arachidis. Pseudomonas sp. GRS 175, Pseudomonas aeruginosa GPS 21, GSE 18, GSE 19, and GSE 30, and their cell-free culture filtrates were highly antagonistic to all the test fungi. The cell-free culture filtrates of these bacteria were fungicidal and induced mycelial deformations including hyphal bulging and vacuolization in necrotrophic fungi. The cell-free culture filtrates at 10% (v/v) concentration significantly inhibited the spore germination of biotrophic fungi. In the greenhouse, P. aeruginosa GSE 18 emerged as an effective biocontrol agent of collar rot closely followed by P. aeruginosa GSE 19. The bacterium applied as a seed treatment reduced the pre-emergence rotting and postemergence wilting by > 60%. Pseudomonas aeruginosa GSE 18 effectively colonized the groundnut rhizosphere, both in native and in A. niger infested potting mixtures. Ninety-day-old peat formulation of P. aeruginosa GSE 18 had biocontrol ability comparable with the midlog-phase cells. Pseudomonas aeruginosa GSE 18, tolerant to thiram, in combination with the fungicide had an improved collar rot control. The present study was a successful attempt in selection of broad-spectrum and fungicide tolerant biocontrol agents that can be a useful component of integrated management of collar rot.

  16. Investigation of the radiation effects on Brown Rot disease of Golden Delicious apples, inoculated with the fungus Monilinia fructigena.

    PubMed

    Marcaki, P

    1998-01-01

    The effects of 0, 1.5 and 3 KGy gamma-irradiation on Brown Rot disease affecting Golden Delicious apples are investigated. The apples were artificially inoculated with Monilinia fructigena fungus before and after irradiation. Results show clearly that radiation induces a delay in fungus development, even when it is not directly affected. The effect of radiation on the apples' substrate seems to be considerable, being the main factor affecting fungal growth. Radiation doses of 1.5 and 3 KGy do not seem to produce strong differences in the fungal growth. Irradiation, however, is very effective, producing important changes of practical interest for apples infected before or after irradiation.

  17. Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Background: Moniliophthora roreri is the causal agent of Frosty pod rot (FPR) disease of Theobroma cacao, the source of chocolate and is one of the most destructive diseases of cacao in the Americas. This Basidiomycete only infects cacao pods and has an extended biotrophic phase lasting up to sixty ...

  18. Root rot in sugar beet piles at harvest

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sugar beet root rots are not only a concern because of reduced yields, but can also be associated with losses in storage. Our primary sugar beet root rot disease problem in the Amalgamated production area is Rhizoctonia root rot. However, this rot frequently only penetrates a short distance past t...

  19. Phylogeny and population structure of brown rot- and Moko disease-causing strains of Ralstonia solanacearum phylotype II.

    PubMed

    Cellier, G; Remenant, B; Chiroleu, F; Lefeuvre, P; Prior, P

    2012-04-01

    The ancient soilborne plant vascular pathogen Ralstonia solanacearum has evolved and adapted to cause severe damage in an unusually wide range of plants. In order to better describe and understand these adaptations, strains with very similar lifestyles and host specializations are grouped into ecotypes. We used comparative genomic hybridization (CGH) to investigate three particular ecotypes in the American phylotype II group: (i) brown rot strains from phylotypes IIB-1 and IIB-2, historically known as race 3 biovar 2 and clonal; (ii) new pathogenic variants from phylotype IIB-4NPB that lack pathogenicity for banana but can infect many other plant species; and (iii) Moko disease-causing strains from phylotypes IIB-3, IIB-4, and IIA-6, historically known as race 2, that cause wilt on banana, plantain, and Heliconia spp. We compared the genomes of 72 R. solanacearum strains, mainly from the three major ecotypes of phylotype II, using a newly developed pangenomic microarray to decipher their population structure and gain clues about the epidemiology of these ecotypes. Strain phylogeny and population structure were reconstructed. The results revealed a phylogeographic structure within brown rot strains, allowing us to distinguish European outbreak strains of Andean and African origins. The pangenomic CGH data also demonstrated that Moko ecotype IIB-4 is phylogenetically distinct from the emerging IIB-4NPB strains. These findings improved our understanding of the epidemiology of important ecotypes in phylotype II and will be useful for evolutionary analyses and the development of new DNA-based diagnostic tools. PMID:22286995

  20. Phylogeny and Population Structure of Brown Rot- and Moko Disease-Causing Strains of Ralstonia solanacearum Phylotype II

    PubMed Central

    Remenant, B.; Chiroleu, F.; Lefeuvre, P.; Prior, P.

    2012-01-01

    The ancient soilborne plant vascular pathogen Ralstonia solanacearum has evolved and adapted to cause severe damage in an unusually wide range of plants. In order to better describe and understand these adaptations, strains with very similar lifestyles and host specializations are grouped into ecotypes. We used comparative genomic hybridization (CGH) to investigate three particular ecotypes in the American phylotype II group: (i) brown rot strains from phylotypes IIB-1 and IIB-2, historically known as race 3 biovar 2 and clonal; (ii) new pathogenic variants from phylotype IIB-4NPB that lack pathogenicity for banana but can infect many other plant species; and (iii) Moko disease-causing strains from phylotypes IIB-3, IIB-4, and IIA-6, historically known as race 2, that cause wilt on banana, plantain, and Heliconia spp. We compared the genomes of 72 R. solanacearum strains, mainly from the three major ecotypes of phylotype II, using a newly developed pangenomic microarray to decipher their population structure and gain clues about the epidemiology of these ecotypes. Strain phylogeny and population structure were reconstructed. The results revealed a phylogeographic structure within brown rot strains, allowing us to distinguish European outbreak strains of Andean and African origins. The pangenomic CGH data also demonstrated that Moko ecotype IIB-4 is phylogenetically distinct from the emerging IIB-4NPB strains. These findings improved our understanding of the epidemiology of important ecotypes in phylotype II and will be useful for evolutionary analyses and the development of new DNA-based diagnostic tools. PMID:22286995

  1. Phylogeny and population structure of brown rot- and Moko disease-causing strains of Ralstonia solanacearum phylotype II.

    PubMed

    Cellier, G; Remenant, B; Chiroleu, F; Lefeuvre, P; Prior, P

    2012-04-01

    The ancient soilborne plant vascular pathogen Ralstonia solanacearum has evolved and adapted to cause severe damage in an unusually wide range of plants. In order to better describe and understand these adaptations, strains with very similar lifestyles and host specializations are grouped into ecotypes. We used comparative genomic hybridization (CGH) to investigate three particular ecotypes in the American phylotype II group: (i) brown rot strains from phylotypes IIB-1 and IIB-2, historically known as race 3 biovar 2 and clonal; (ii) new pathogenic variants from phylotype IIB-4NPB that lack pathogenicity for banana but can infect many other plant species; and (iii) Moko disease-causing strains from phylotypes IIB-3, IIB-4, and IIA-6, historically known as race 2, that cause wilt on banana, plantain, and Heliconia spp. We compared the genomes of 72 R. solanacearum strains, mainly from the three major ecotypes of phylotype II, using a newly developed pangenomic microarray to decipher their population structure and gain clues about the epidemiology of these ecotypes. Strain phylogeny and population structure were reconstructed. The results revealed a phylogeographic structure within brown rot strains, allowing us to distinguish European outbreak strains of Andean and African origins. The pangenomic CGH data also demonstrated that Moko ecotype IIB-4 is phylogenetically distinct from the emerging IIB-4NPB strains. These findings improved our understanding of the epidemiology of important ecotypes in phylotype II and will be useful for evolutionary analyses and the development of new DNA-based diagnostic tools.

  2. Root Interactions in a Maize/Soybean Intercropping System Control Soybean Soil-Borne Disease, Red Crown Rot

    PubMed Central

    Gao, Xiang; Wu, Man; Xu, Ruineng; Wang, Xiurong; Pan, Ruqian; Kim, Hye-Ji; Liao, Hong

    2014-01-01

    Background Within-field multiple crop species intercropping is well documented and used for disease control, but the underlying mechanisms are still unclear. As roots are the primary organ for perceiving signals in the soil from neighboring plants, root behavior may play an important role in soil-borne disease control. Principal Findings In two years of field experiments, maize/soybean intercropping suppressed the occurrence of soybean red crown rot, a severe soil-borne disease caused by Cylindrocladium parasiticum (C. parasiticum). The suppressive effects decreased with increasing distance between intercropped plants under both low P and high P supply, suggesting that root interactions play a significant role independent of nutrient status. Further detailed quantitative studies revealed that the diversity and intensity of root interactions altered the expression of important soybean PR genes, as well as, the activity of corresponding enzymes in both P treatments. Furthermore, 5 phenolic acids were detected in root exudates of maize/soybean intercropped plants. Among these phenolic acids, cinnamic acid was released in significantly greater concentrations when intercropped maize with soybean compared to either crop grown in monoculture, and this spike in cinnamic acid was found dramatically constrain C. parasiticum growth in vitro. Conclusions To the best of our knowledge, this study is the first report to demonstrate that intercropping with maize can promote resistance in soybean to red crown rot in a root-dependent manner. This supports the point that intercropping may be an efficient ecological strategy to control soil-borne plant disease and should be incorporated in sustainable agricultural management practices. PMID:24810161

  3. The Effect of Potassium Nitrate on the Reduction of Phytophthora Stem Rot Disease of Soybeans, the Growth Rate and Zoospore Release of Phytophthora Sojae

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of potassium nitrate (KNO3) application on Phytophthora stem rot disease reduction of Glycine max (L.) Merr. cvs. Chusei-Hikarikuro and Sachiyutaka, and fungal growth and zoospore release of a Phytophthora sojae isolate were investigated under laboratory conditions. The application of 4-...

  4. Control of Basal Stem Rot Disease in Oil Palm by Supplementation of Calcium, Copper, and Salicylic Acid

    PubMed Central

    Bivi, M. Shahul Hamid Rahamah; Paiko, Adamu Saidu; Khairulmazmi, Ahmad; Akhtar, M. S.; Idris, Abu Seman

    2016-01-01

    Continuous supplementation of mineral nutrients and salicylic acid (SA) as foliar application could improve efficacy in controlling basal stem rot (BSR) disease in oil palm seedling. It is revealed from the results that the highest disease severity index (58.3%) was recorded in T8 treatments at 9 months after inoculation. The best disease control was achieved by T7 treatments (calcium/copper/SA [Ca/Cu/SA]) (5.0%) followed by T1 (5.5%), T5 (5.8%), T3 (8.3%), T6 (8.3%), T4 (13.3%), and T2 (15.8%) treatments. Continuous supplementation of Ca/Cu/SA was found to be the most effective in controlling the disease and the high performance liquid chromatography results showed the detection of ergosterol at very low concentration in the treated samples. Moreover, the transmission electron microscopy analysis results clearly indicated that T7 treatment was also enhancing lignification, which was responsible for the thickness of the secondary cell walls and middle lamella compared to untreated samples. It was therefore, concluded that continuous supplementation of minerals nutrients and SA could effectively suppress disease severity by reducing ergosterol activity and also improve the process of lignification in the treated plants. Furthermore, this treatment also managed to delay the onset of BSR symptoms and promote the growth of the seedlings and eventually suppress the BSR disease. PMID:27721689

  5. Nucleic acid spot hybridization based species-specific detection of Sclerotium rolfsii associated with collar rot disease of Amorphophallus paeoniifolius.

    PubMed

    Pravi, V; Jeeva, M L; Archana, P V

    2015-02-01

    Collar rot is one of the most destructive and prevalent disease of Amorphophallus paeoniifolius, resulting in heavy yield losses. The causative organism, Sclerotium rolfsii is a soil-borne polyphagous fungus characterized by prolific growth and ability to produce persistent sclerotia. The pathogen propagules surviving in soil and planting material are the major sources of inoculum. This study presents the suitability of DNA hybridization technique for species specific detection of S. rolfsii in soil and planting material. The detection limit of the probe was 10-15 pg of pure pathogen DNA. The developed probe was found to be highly specific and could be used for accurate identification of pathogen up to the species level. The protocol was standardized for detection of the pathogen in naturally infected field samples. PMID:25449141

  6. Efficacy of Oryza sativa husk and Quercus phillyraeoides extracts for the in vitro and in vivo control of fungal rot disease of white yam (Dioscorea rotundata Poir).

    PubMed

    Dania, Victor Ohileobo; Fadina, Olubunmi Omowunmi; Ayodele, Maria; Kumar, P Lava

    2014-01-01

    Tuber rot disease is a major constraint to white yam (Dioscorea rotundata) production, accounting for 50-60% of annual yield losses in Nigeria. The main method of control using synthetic fungicides is being discouraged due to human and environmental health hazards. The potential of Oryza sativa husk (OSH) and Quercus phillyraeoides (QP) extracts for the in vitro and in vivo control of six virulent rot-causing fungal pathogens, Lasiodiplodia theobromae, Aspergillus niger, Rhizoctonia solani, Penicillium oxalicum, Sclerotium rolfsii, and Fusarium oxysporum was evaluated, using five different extract concentrations of 0.5%, 1.0%, 1.5%, 2.5%, and 3.5% w/v. These fungi were isolated from rotted tubers of D. rotundata, across three agroecological zones in Nigeria-the Humid rainforest, Derived savanna, and southern Guinea savanna. All treatments were subjected to three methods of inoculation 48 hours before the application of both extracts and stored at 28 ± 2°C for 6 months. Radial mycelial growth of the test pathogens was effectively inhibited at concentrations ≤ 3.5% w/v in vitro for both OSH and QP extracts. Rotting was significantly reduced (P ≤ 0.05) to between 0 to 18.8% and 0% to 20.9% for OSH and QP extracts respectively. The extracts significantly (P ≤ 0.05) inhibited percent rot of the test pathogens at 3.5% concentration w/v in vivo. Rot incidence was, however, lower in replicate tubers that were inoculated, treated with extracts and exposed than treatments that were covered. Phytochemical analysis of OSH and QP extracts revealed the presence of secondary metabolites such as alkaloids, flavonoids, saponins, tannins, ferulic acid, phlobatanins, Terpenoids, phenols, anthraquinone and pyroligneous acid. The efficacy of both extracts in reducing rot in this study recommends their development as prospective biopesticide formulation and use in the management of post-harvest rot of yam tubers. PMID:25674452

  7. Spacelab Charcoal Analyses

    NASA Technical Reports Server (NTRS)

    Slivon, L. E.; Hernon-Kenny, L. A.; Katona, V. R.; Dejarme, L. E.

    1995-01-01

    This report describes analytical methods and results obtained from chemical analysis of 31 charcoal samples in five sets. Each set was obtained from a single scrubber used to filter ambient air on board a Spacelab mission. Analysis of the charcoal samples was conducted by thermal desorption followed by gas chromatography/mass spectrometry (GC/MS). All samples were analyzed using identical methods. The method used for these analyses was able to detect compounds independent of their polarity or volatility. In addition to the charcoal samples, analyses of three Environmental Control and Life Support System (ECLSS) water samples were conducted specifically for trimethylamine.

  8. Reaction of selected soybean cultivars to Rhizoctonia root rot and other damping-off disease agents.

    PubMed

    Amer, M A

    2005-01-01

    Eight soybean cultivars; Giza 21. Giza 22, Giza 35, Giza 82, Giza 83, Crawford, Holladay and Toamo were evaluated to Rhizoctonia root rot using agar plate and potted plant techniques. Data cleared that, in agar plate assay all soybean cultivars were moderately susceptible (MS), although the differences between them were significant (P=0.05). Generally, in potted assay, the reactions were resistant (R) or moderately resistant (MR) to root rots. Also, the differences between cultivars were significant (P=0.05). These cultivars were inoculated under greenhouse conditions with Fusarium solani, Macrophomina phaseolina, Rhizoctonia solani and Sclerotium rolfsii Generally, G21 had the least pre-emergence damping-off followed by Giza 35, Crawford and Giza 83 with averages of 19.0, 20.0, 20.5 and 21.5%, respectively. In case of post-emergence, Giza 35 had the least values, followed by Giza 21, Crawford and Giza 82 with averages 3.95, 4.10, 4.10 and 4.25%, respectively. Under naturally infested soil in the field conditions the reactions of the same cultivars to damping-off were evaluated in two successive seasons. In 2002 season, G35 had the least pre-emergence damping-off % followed by Giza 21 and Giza 22 with averages of 22.61, 24.33 and 29.33%, respectively. Also, G35 had the least post-emergence damping-off % followed by Toamo and Giza 21 with averages of 9.40, 10.33 and 10.41%, respectively. In 2003 season, the same trend was appeared with light grade where Giza 35 had the least pre-emergence damping of % followed by Giza 22 and Giza 21 with averages of 30.67, 31.00 and 36.67%, respectively and Giza 35 was the most resistant cultivar against post-emergence damping-off, followed by Giza 21 and Giza 22 with averages of 10.91, 11.32 and 11.80%, respectively. Generally, Giza 21 significantly surpassed the other cultivars in plant height, number of pods per plant and 100-seed weight. Moreover, also it had second grade with the other traits.

  9. VOST charcoal specification study

    SciTech Connect

    Foster, A.L.; Bursey, J.T.

    1995-07-01

    The volatile organic sampling train, SW-846 Method 0030, (VOST) is currently one of the leading methodology`s available for the sampling and analysis of volatile organic hazardous compounds from stationary sources at very low levels. The method does not identify a specific equivalent sorbent, nor the performance specifications which would allow determination of an equivalent. Lot 104 petroleum-based charcoal is no longer commercially available. Laboratories are presently using a wide range of substitutes with varying performance from batch to batch of charcoal. To provide performance specifications and identify a replacement for SKC Lot 104 charcoal, a VOST charcoal specification study was initiated. Performance, cost, ease of handling, and plentiful supply make Anasorb 747 a good choice for replacement of SKX Lot 104.

  10. Field application of safe chemical elicitors induced the expression of some resistance genes against grey mold and cottony rot diseases during snap bean pods storage.

    PubMed

    El-Garhy, Hoda A S; Rashid, Ismail A S; Abou-Ali, Rania M; Moustafa, Mahmoud M A

    2016-01-15

    Phaseolus vulgaris is subjected to serious post-harvest diseases such as grey mold and cottony rot diseases caused by Botrytis cinerea and Pythium aphanidermatum, respectively. In current study, potassium silicate (KSi), potassium thiosulfate (KTS) and potassium sulfate (KS) suppressed moderately the growth of B. cinerea and P. aphanidermatum in vitro. The applied treatments significantly suppressed grey mold and cottony rot of Xera and Valentino snap beans varieties' pods stored at 7 ± 1°C and 90-95% RH for 20 days. Ethylene responsive factor (ERF), polygalacturonase inhibitor protein (PGIP), phosphatase associated to defense (PA) and pathogenesis-related protein (PR1) defense genes were over-expressed in leaves tissue of both bean varieties responding positively to potassium salts field application. The expression of these genes was influenced by plant genotype and environment as it varied by snap bean varieties. Accumulation of ERF, GIP, PA and PR1 genes transcript under KTS at 4000 ppm treatment were the highest in Xera tissues (3.5-, 4.8-, 4- and 4.8-fold, respectively). In conclusion, pre-harvest potassium salt in vivo application could be used as effective safe alternatives to fungicides against grey mold and cottony rot diseases of snap beans during storage for up to 20 days at 7 ± 1°C.

  11. VOST charcoal specification study

    SciTech Connect

    Fuerst, R.G.; Foster, A.L.; Bursey, J.T.

    1996-12-31

    The volatile organic sampling train (VOST) is currently one the leading methodologies available for the sampling and analysis of volatile principal organic hazardous constituents (POHCs) and products of incomplete combustion (PICs) from stationary sources at very low levels. However, revisions to the original method are necessary to maintain VOST as a viable regulatory tool. To provide performance specifications and identify a replacement for SKC Lot 104 charcoal, a VOST charcoal specification study was initiated. The following carbon-based candidate sorbents were considered: Tenax-GR (a graphitized Tenax); a Petroleum-based Charcoal; Ambersorbe XE-340 (hydrophobic carbonized resin bead); Anasorb 747 (beaded active carbon with very regular pore size); Carbosieve{reg_sign} S-III (carbon molecular sieve); and a Beaded Activated Charcoal (BAC) (with a very regular pore size). The results indicated that Tenax-GR showed significantly poorer performance than the other candidates in preliminary experimental results. Ambersorb did not retain the gaseous volatile organic compounds tested as well as the others and recovery of vinyl chloride was very low at all levels of spiking. Carbosieve was eliminated as a candidate replacement because of cost and handling problems. The petroleum-based charcoal was eliminated because of difficulties in handling a finely-divided powder. The availability of Anasorb 747 proved to be the deciding factor between it and the BAC. Performance, cost, ease of handling, and plentiful supply make Anasorb{reg_sign} 747 a good choice for replacement of SKC Lot 104. 1 tab.

  12. Application of arbuscular mycorrhizal fungi with Pseudomonas aeruginosa UPMP3 reduces the development of Ganoderma basal stem rot disease in oil palm seedlings.

    PubMed

    Sundram, Shamala; Meon, Sariah; Seman, Idris Abu; Othman, Radziah

    2015-07-01

    The effect of arbuscular mycorrhizal fungi (AMF) in combination with endophytic bacteria (EB) in reducing development of basal stem rot (BSR) disease in oil palm (Elaeis guineensis) was investigated. BSR caused by Ganoderma boninense leads to devastating economic loss and the oil palm industry is struggling to control the disease. The application of two AMF with two EB as biocontrol agents was assessed in the nursery and subsequently, repeated in the field using bait seedlings. Seedlings pre-inoculated with a combination of Glomus intraradices UT126, Glomus clarum BR152B and Pseudomonas aeruginosa UPMP3 significantly reduced disease development measured as the area under disease progression curve (AUDPC) and the epidemic rate (R L) of disease in the nursery. A 20-month field trial using similar treatments evaluated disease development in bait seedlings based on the rotting area/advancement assessed in cross-sections of the seedling base. Data show that application of Glomus intraradices UT126 singly reduced disease development of BSR, but that combination of the two AMF with P. aeruginosa UPMP3 significantly improved biocontrol efficacy in both nursery and fields reducing BSR disease to 57 and 80%, respectively. The successful use of bait seedlings in the natural environment to study BSR development represents a promising alternative to nursery trial testing in the field with shorter temporal assessment.

  13. Charcoal filter testing

    SciTech Connect

    Lyons, J.

    1997-08-01

    In this very brief, informal presentation, a representative of the US Nuclear Regulatory Commission outlines some problems with charcoal filter testing procedures and actions being taken to correct the problems. Two primary concerns are addressed: (1) the process to find the test method is confusing, and (2) the requirements of the reference test procedures result in condensation on the charcoal and causes the test to fail. To address these problems, emergency technical specifications were processed for three nuclear plants. A generic or an administrative letter is proposed as a more permanent solution. 1 fig.

  14. Response of the Andean diversity panel to root rot in a root rot nursery in Puerto Rico

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Andean Diversity Panel (ADP) was evaluated under low-fertility and root rot conditions in two trials conducted in 2013 and 2015 in Isabela, Puerto Rico. About 246 ADP lines were evaluated in the root rot nursery with root rot and stem diseases caused predominantly by Fusarium solani, which cause...

  15. Genetic and pathogenic variability of Indian strains of Xanthomonas campestris pv. campestris causing black rot disease in crucifers.

    PubMed

    Singh, Dinesh; Dhar, Shri; Yadava, D K

    2011-12-01

    Xanthomonas campestris pv. campestris (Pammel) Dowson (Xcc) causing black rot of crucifers is a serious disease in India and causes >50% crop losses in favorable environmental conditions. Pathogenic variability of Xcc, X. oryzae pv. oryzae (Xoo), and X. axonopodis pv. citri (Xac) were tested on 19 cultivars of cruciferae including seven Brassica spp. viz., B. campestris, B. carinata, B. juncea, B. napus, B. nigra, B. oleracea and B. rapa, and Raphanus sativus for two consecutive years viz., 2007-2008 and 2008-2009 under field conditions at Indian Agricultural Research Institute, New Delhi. Xcc (22 strains) and other species of Xanthomonas (2 strains), they formed three distinct groups of pathogenic variability i.e., Group 1, 2, and 3 under 50% minimum similarity coefficient. All strains of Xcc clustered under Groupl except Xcc-C20. The strains of Xcc further clustered in 6 subgroups viz., A, B, C, D, E, and F based on diseases reaction on host. Genetic variability of 22 strains of Xcc was studied by using Rep-PCR (REP-, BOX- and ERIC-PCR) and 10 strains for hrp (hypersensitive reaction and pathogenecity) gene sequence analysis. Xcc strains comprised in cluster 1, Xac under cluster 2, while Xoo formed separate cluster 3 based on >50% similarity coefficient. Cluster 1 was further divided into 8 subgroups viz., A, B, C, D, E, F, G, and H at 75% similarity coefficient. The hrpF gene sequence analysis also showed distinctness of Xcc strains from other Xanthomonads. In this study, genetic and pathogenic variability in Indian strains of Xcc were established, which will be of immense use in the development of resistant genotypes against this bacterial pathogen.

  16. BGRcast: A Disease Forecast Model to Support Decision-making for Chemical Sprays to Control Bacterial Grain Rot of Rice.

    PubMed

    Lee, Yong Hwan; Ko, Sug-Ju; Cha, Kwang-Hong; Park, Eun Woo

    2015-12-01

    A disease forecast model for bacterial grain rot (BGR) of rice, which is caused by Burkholderia glumae, was developed in this study. The model, which was named 'BGRcast', determined daily conduciveness of weather conditions to epidemic development of BGR and forecasted risk of BGR development. All data that were used to develop and validate the BGRcast model were collected from field observations on disease incidence at Naju, Korea during 1998-2004 and 2010. In this study, we have proposed the environmental conduciveness as a measure of conduciveness of weather conditions for population growth of B. glumae and panicle infection in the field. The BGRcast calculated daily environmental conduciveness, Ci , based on daily minimum temperature and daily average relative humidity. With regard to the developmental stages of rice plants, the epidemic development of BGR was divided into three phases, i.e., lag, inoculum build-up and infection phases. Daily average of Ci was calculated for the inoculum build-up phase (Cinf ) and the infection phase (Cinc ). The Cinc and Cinf were considered environmental conduciveness for the periods of inoculum build-up in association with rice plants and panicle infection during the heading stage, respectively. The BGRcast model was able to forecast actual occurrence of BGR at the probability of 71.4% and its false alarm ratio was 47.6%. With the thresholds of Cinc = 0.3 and Cinf = 0.5, the model was able to provide advisories that could be used to make decisions on whether to spray bactericide at the pre- and post-heading stage.

  17. Wood-rotting basidiomycetes associated with grapevine trunk diseases in Texas

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Grapevine trunk diseases Esca, Botryosphaeria dieback, Eutypa dieback, and Phomopsis dieback impact vineyards in all major grape-growing regions of the world. The causal pathogens (Phaeomoniella chlamydospora and Phaeoacremonium minimum, Neofusicoccum parvum, Eutypa lata, and Diaporthe ampelina, res...

  18. Rapid and sensitive detection of Sclerotium rolfsii associated with collar rot disease of Amorphophallus paeoniifolius by species-specific polymerase chain reaction assay.

    PubMed

    Pravi, V; Jeeva, M L; Archana, P V

    2014-09-01

    Collar rot disease caused by Sclerotium rolfsii is an economically important disease prevailing in all Amorphophallus growing areas. The pathogen propagules surviving in soil and planting material are the major sources of inoculum. A nested PCR assay has been developed for specific detection of S. rolfsii in soil and planting material. The PCR detection limit was 10 pg in conventional assay whereas 0.1 pg in nested assay. The primers designed were found to be highly specific and could be used for accurate identification of pathogen up to species level. The protocol was standardized for detection of the pathogen in artificially and naturally infected field samples. PMID:24788585

  19. Evaluation of fruit rot disease resistance in muscadine grapes (Vitis rotundifolia Michx)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Musacadine grapes (Vitis rotundifolia Michx.) are truly a sustainable fruit for the southeastern United States. Although far more resistant to many fungal and bacterial diseases and pests than most of the bunch grapes (V. vinifera, V. labrusca, or their derivatives), muscadine grape suffers consider...

  20. The influence of formulation on Trichoderma biological activity and frosty pod rot disease management in Theobroma cacao

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Frosty pod rot (FPR), caused by Moniliophthora roreri is responsible for significant losses in Theobroma cacao. Due to the limited options for FPR management, biological control methods using Trichoderma are being studied. Combinations of three formulations and two Trichoderma isolates were studied ...

  1. Commercial charcoal manufacture in Brazil

    SciTech Connect

    Rezende, M.E.; Lessa, A.; Pasa, V.; Sampaio, R.; Macedo, P.

    1993-12-31

    Brazil is the only country where charcoal has a major industrial us. Almost 40% of the pig iron and all the ferroalloys produced in the country are based on it and were established near Minas Gerais iron ore deposits using non-sustainable farm charcoal. Since the 1980s charcoal production from large eucalyptus forests is gradually increasing, accounting for 40% of the 8 million tonnes produced in 1991. Farm charcoal is produced when native forests are slashed to give way to farm land. Adequate techniques, labor rights or environmental concerns are not common in this scenario. In large eucalyptus forests charcoal production has a different business approach. Several kinds of masonry ovens are used in both scenarios. Continuous carbonization kilns are not feasible yet because of their high capital cost. The search for a new cheapest design or for the upgrading of the carbonization byproducts is a must. Promising results are shown. Plastics and fine chemicals were already obtained from wood tar. The first Brazilian pilot plant for wood tar fractionation will be started by 9/93. Ironworks have different profiles. Some plants are up-to-date integrated mini-steelworks. Others are small producers of pig ingots. They have in common the need to face coke ironmaking route. Brazilian exports of charcoal based iron and steel products have attained the goal until now. Future charcoal competitiveness will not be so easy. Although expertises believe that coke prices can not stand low for long time it poses additional difficulty to the Brazilian charcoal ironmaker. Three scenarios projected for the future of charcoal ironmaking show that as long as charcoal production costs are properly managed, charcoal will be competitive with coke. The authors defend a common research program that looks for technologies suited to the Brazilian reality.

  2. Pseudomonads associated with midrib rot and soft rot of butterhead lettuce and endive.

    PubMed

    Cottyn, B; Vanhouteghem, K; Heyrman, J; Bleyaert, P; Van Vaerenbergh, J; De Vos, P; Höfte, M; Maes, M

    2005-01-01

    During the past ten years, bacterial soft rot and midrib rot of glasshouse-grown butterhead lettuce (Lactuca sativa L. var. capitata) and field-grown endive (Cichorium endivia L.) has become increasingly common in the region of Flanders, Belgium. Severe losses and reduced market quality caused by bacterial rot represent an important economical threat for the production sector. Symptoms of midrib rot are a brownish rot along the midrib of one or more inner leaves, often accompanied by soft rot of the leaf blade. Twenty-five symptomatic lettuce and endive samples were collected from commercial growers at different locations in Flanders. Isolations of dominant bacterial colony types on dilution plates from macerated diseased tissue extracts yielded 282 isolates. All isolates were characterized by colony morphology and fluorescence on pseudomonas agar F medium, oxidase reaction, and soft rot ability on detached chicory leaves. Whole-cell fatty acid methyl esters profile analyses identified the majority of isolates (85%) as belonging to the Gammaproteobacteria, which included members of the family Enterobacteriaceae (14%) and of the genera Pseudomonas (73%), Stenotrophomonas (9%), and Acinetobacter (3%). Predominant bacteria were a diverse group of fluorescent Pseudomonas species. They were further differentiated based on the non-host hypersensitive reaction on tobacco and the ability to rot potato slices into 4 phenotypic groups: HR-/P- (57 isolates), HR-/P+ (54 isolates), HR+/P (16 isolates) and HR+/P+ (35 isolates). Artificial inoculation of suspensions of HR-, pectolytic fluorescent pseudomonads in the leaf midrib of lettuce plants produced various symptoms of soft rot, but they did not readily cause symptoms upon spray inoculation. Fluorescent pseudomonads with phenotype HR+ were consistently isolated from typical dark midrib rot symptoms, and selected isolates reproduced the typical midrib rot symptoms when spray-inoculated onto healthy lettuce plants. PMID

  3. Development of variable number of tandem repeats typing schemes for Ralstonia solanacearum, the agent of bacterial wilt, banana Moko disease and potato brown rot.

    PubMed

    N'guessan, Carine Aya; Brisse, Sylvain; Le Roux-Nio, Anne-Claire; Poussier, Stéphane; Koné, Daouda; Wicker, Emmanuel

    2013-03-01

    Ralstonia solanacearum is an important soil borne bacterial plant pathogen causing bacterial wilt on many important crops. To better monitor epidemics, efficient tools that can identify and discriminate populations are needed. In this study, we assessed variable number of tandem repeats (VNTR) genotyping as a new tool for epidemiological surveillance of R. solanacearum phylotypes, and more specifically for the monitoring of the monomorphic ecotypes "Moko" (banana-pathogenic) and "brown rot" (potato-pathogenic under cool conditions). Screening of six R. solanacearum genome sequences lead to select 36 VNTR loci that were preliminarily amplified on 24 strains. From this step, 26 single-locus primer pairs were multiplexed, and applied to a worldwide collection of 337 strains encompassing the whole phylogenetic diversity, with revelation on a capillary-electrophoresis genotype. Four loci were monomorphic within all phylotypes and were not retained; the other loci were highly polymorphic but displayed a clear phylotype-specificity. Phylotype-specific MLVA schemes were thus defined, based on 13 loci for phylotype I, 12 loci for phylotype II, 11 loci for phylotype III and 6 for phylotype IV. MLVA typing was significantly more discriminative than egl-based sequevar typing, particularly on monomorphic "brown rot" ecotype (phylotype IIB/sequevar 1) and "Moko disease" clade 4 (Phylotype IIB/sequevar 4). Our results raise promising prospects for studies of population genetic structures and epidemiological monitoring.

  4. Management of Rhizoctonia root and crown rot of subarbeet

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rhizoctonia root and crown rot is caused by the fungus Rhizoctonia solani and is one of the most severe soil-borne diseases of sugarbeet in Minnesota and North Dakota. Rhizoctonia root and crown rot may reduce yield significantly, and diseased beets may cause problems in storage piles. Fields with...

  5. Fungitoxicity of some higher plants and synergistic activity of their essential oils against Sclerotium rolfsii sacc. causing foot-rot disease of barley.

    PubMed

    Singh, R K

    Twenty five plant species were screened for their volatile components against hyphal growth and sclerotia formation of Sclerotium rolfsii causing foot rot disease of barley (Hordeum vulgare). Leaves of Chenopodium ambrosioides (CA), Lippia alba (LA), Azadirachta indica (AI) and Eucalyptus globulus (EG) were found to be strongly toxic. Their volatile active factors were isolated in the form of essential oils which were tested for toxicity individually and in six combinations (1:1 v/v) viz. CA-LA, LA-AI, CA-AI, CA-EG, and EG-AI. The oil combinations were found to be more fungitoxic than the individual oils. The CA-LA, LA-AI, EG-AI, and CA-EG combinations exhibited a broad fnngitoxic spectrum while CA-AI, LA-EG combinations possessed a narrow range of toxicity. None of the six oil combinations showed phytotoxic behaviour on seed germination, seedling growth and general morphology of Hordeum vulgare.

  6. Agro-ecological variations of sheath rot disease of rice caused by Sarocladium oryzae and DNA fingerprinting of the pathogen's population structure.

    PubMed

    Tajul Islam Chowdhury, M; Salim Mian, M; Taher Mia, M A; Rafii, M Y; Latif, M A

    2015-12-28

    To examine the impact of regional and seasonal variations on the incidence and severity of sheath rot, a major seed-borne disease of rice caused by Sarocladium oryzae, data on incidence and severity were collected from 27 selected fields in the Gazipur, Rangpur, Bogra, Chittagong, Comilla, Gopalgonj, Jessore, Manikgonj, and Bhola districts of Bangladesh in rain-fed and irrigated conditions. Cultural variability of 29 pathogen isolates obtained from 8 different locations was studied on potato dextrose agar (PDA) and genetic variability was determined by DNA fingerprinting using variable number tandem repeat-polymerase chain reaction markers. Overall, disease incidence and severity were higher in irrigated rice. Disease incidence and severity were highest in the Bhola district in rain-fed rice and lowest in irrigated rice. Mycelial growth of 29 representative isolates was found to vary on PDA and the isolates were divided into 6 groups. The range of the overall size of conidia of the selected isolates was 2.40-7.20 x 1.20-2.40 μm. Analysis of the DNA fingerprint types of the 29 isolates of S. oryzae, obtained from the amplification reactions, revealed 10 fingerprinting types (FPTs) that were 80% similar. FPT-1 was the largest group and included 13 isolates (44.8%), while FPT-2 was the third largest group and included 3 isolates. Each of FPT-3, 4, 5, and 6 included only 1 isolate. We observed no relationship between cultural and genetic groupings.

  7. Agro-ecological variations of sheath rot disease of rice caused by Sarocladium oryzae and DNA fingerprinting of the pathogen's population structure.

    PubMed

    Tajul Islam Chowdhury, M; Salim Mian, M; Taher Mia, M A; Rafii, M Y; Latif, M A

    2015-01-01

    To examine the impact of regional and seasonal variations on the incidence and severity of sheath rot, a major seed-borne disease of rice caused by Sarocladium oryzae, data on incidence and severity were collected from 27 selected fields in the Gazipur, Rangpur, Bogra, Chittagong, Comilla, Gopalgonj, Jessore, Manikgonj, and Bhola districts of Bangladesh in rain-fed and irrigated conditions. Cultural variability of 29 pathogen isolates obtained from 8 different locations was studied on potato dextrose agar (PDA) and genetic variability was determined by DNA fingerprinting using variable number tandem repeat-polymerase chain reaction markers. Overall, disease incidence and severity were higher in irrigated rice. Disease incidence and severity were highest in the Bhola district in rain-fed rice and lowest in irrigated rice. Mycelial growth of 29 representative isolates was found to vary on PDA and the isolates were divided into 6 groups. The range of the overall size of conidia of the selected isolates was 2.40-7.20 x 1.20-2.40 μm. Analysis of the DNA fingerprint types of the 29 isolates of S. oryzae, obtained from the amplification reactions, revealed 10 fingerprinting types (FPTs) that were 80% similar. FPT-1 was the largest group and included 13 isolates (44.8%), while FPT-2 was the third largest group and included 3 isolates. Each of FPT-3, 4, 5, and 6 included only 1 isolate. We observed no relationship between cultural and genetic groupings. PMID:26782461

  8. Replacement of charcoal sorbent in the VOST

    SciTech Connect

    Johnson, L.D.; Fuerst, R.G.; Foster, A.L.; Bursey, J.T.

    1993-01-01

    EPA Method 0030, the Volatile Organic Sampling Train (VOST), for sampling volatile organics from stationary sources, specifies the use of petroleum-base charcoal in the second sorbent tube. Charcoal has proven to be a marginal performer as a sampling sorbent, partly due to inconsistency in analyte recovery. In addition, commercial availability of petroleum charcoal for VOST tubes has been variable. Lack of data on comparability and variability of charcoals for VOST application has created uncertainty when other charcoals are substituted. Five potential sorbent replacements for charcoal in Method 0030 were evaluated along with a reference charcoal. Two of the sorbents tested, Ambersorb XE-340 and Tenax GR, did not perform well enough to qualify as replacements. Three candidates, Anasorb 747, Carbosieve S-III and Kureha Beaded Activated Charcoal, performed adequately, and produced statistically equivalent results. Anasorb 747 appears to be an acceptable replacement for petroleum charcoal, based on a combination of performance, availability, and cost.

  9. The plant pathogen Pantoea ananatis produces N-acylhomoserine lactone and causes center rot disease of onion by quorum sensing.

    PubMed

    Morohoshi, Tomohiro; Nakamura, Yuta; Yamazaki, Go; Ishida, Akio; Kato, Norihiro; Ikeda, Tsukasa

    2007-11-01

    A number of gram-negative bacteria have a quorum-sensing system and produce N-acyl-l-homoserine lactone (AHL) that they use them as a quorum-sensing signal molecule. Pantoea ananatis is reported as a common colonist of wheat heads at ripening and causes center rot of onion. In this study, we demonstrated that P. ananatis SK-1 produced two AHLs, N-hexanoyl-l-homoserine lactone (C6-HSL) and N-(3-oxohexanoyl)-l-homoserine lactone (3-oxo-C6-HSL). We cloned the AHL-synthase gene (eanI) and AHL-receptor gene (eanR) and revealed that the deduced amino acid sequence of EanI/EanR showed high identity to those of EsaI/EsaR from P. stewartii. EanR repressed the ean box sequence and the addition of AHLs resulted in derepression of ean box. Inactivation of the chromosomal eanI gene in SK-1 caused disruption of exopolysaccharide (EPS) biosynthesis, biofilm formation, and infection of onion leaves, which were recovered by adding exogenous 3-oxo-C6-HSL. These results demonstrated that the quorum-sensing system involved the biosynthesis of EPS, biofilm formation, and infection of onion leaves in P. ananatis SK-1.

  10. Fusarium graminearum Possesses Virulence Factors Common to Fusarium Head Blight of Wheat and Seedling Rot of Soybean but Differing in Their Impact on Disease Severity.

    PubMed

    Sella, Luca; Gazzetti, Katia; Castiglioni, Carla; Schäfer, Wilhelm; Favaron, Francesco

    2014-11-01

    Fusarium graminearum is a toxigenic fungal pathogen that causes Fusarium head blight (FHB) and crown rot on cereal crops worldwide. This fungus also causes damping-off and crown and root rots at the early stage of crop development in soybean cultivated in North and South America. Several F. graminearum genes were investigated for their contribution to FHB in cereals but no inherent study is reported for the dicotyledonous soybean host. In this study we determined the disease severity on soybean seedlings of five single gene disrupted mutants of F. graminearum, previously characterized in wheat spike infection. Three of these mutants are impaired on a specific function as the production of deoxynivalenol (DON, Δtri5), lipase (ΔFgl1), and xylanase (Δxyl03624), while the remaining two are MAP kinase mutants (ΔFgOS-2, Δgpmk1), which are altered in signaling pathways. The mutants that were reduced in virulence (Δtri5, ΔFgl1, and ΔFgOS-2) or are avirulent (Δgpmk1) on wheat were correspondently less virulent or avirulent in soybean seedlings, as shown by the extension of lesions and seedling lengths. The Δxyl03624 mutant was as virulent as the wild type mirroring the behavior observed in wheat. However, a different ranking of symptom severity occurred in the two hosts: the ΔFgOS-2 mutant, that infects wheat spikelets similarly to Δtri5 and ΔFgl1 mutants, provided much reduced symptoms in soybean. Differently from the other mutants, we observed that the ΔFgOS-2 mutant was several fold more sensitive to the glyceollin phytoalexin suggesting that its reduced virulence may be due to its hypersensitivity to this phytoalexin. In conclusion, lipase and DON seem important for full disease symptom development in soybean seedlings, OS-2 and Gpmk1 MAP kinases are essential for virulence, and OS-2 is involved in conferring resistance to the soybean phytoalexin.

  11. Development of charcoal sorbents for helium cryopumping

    SciTech Connect

    Sedgley, D.W.; Tobin, A.G.

    1984-01-01

    Testing of the cryogenically cooled charcoal using fusion-compatible binders for pumping helium has shown promising results. The program demonstrated comparable or improved performance with these binders compared to the charcoal (type and size) using an epoxy binder.

  12. Do jasmonates play a role in arbuscular mycorrhiza-induced local bioprotection of Medicago truncatula against root rot disease caused by Aphanomyces euteiches?

    PubMed

    Hilou, Adama; Zhang, Haoqiang; Franken, Philipp; Hause, Bettina

    2014-01-01

    Bioprotective effects of mycorrhization with two different arbuscular mycorrhizal (AM) fungi, Funneliformis mosseae and Rhizophagus irregularis, against Aphanomyces euteiches, the causal agent of root rot in legumes, were studied in Medicago truncatula using phenotypic and molecular markers. Previous inoculation with an AM-fungus reduced disease symptoms as well as the amount of pathogen within roots, as determined by the levels of A. euteiches rRNA or transcripts of the gene sterol C24 reductase. Inoculation with R. irregularis was as efficient as that with F. mosseae. To study whether jasmonates play a regulatory role in bioprotection of M. truncatula by the AM fungi, composite plants harboring transgenic roots were used to modulate the expression level of the gene encoding M. truncatula allene oxide cyclase 1, a key enzyme in jasmonic acid biosynthesis. Neither an increase nor a reduction in allene oxide cyclase levels resulted in altered bioprotection by the AM fungi against root infection by A. euteiches. These data suggest that jasmonates do not play a major role in the local bioprotective effect of AM fungi against the pathogen A. euteiches in M. truncatula roots.

  13. Identification of genes differentially expressed during early interactions between the stem rot fungus (Sclerotium rolfsii) and peanut (Arachis hypogaea) cultivars with increasing disease resistance levels.

    PubMed

    Jogi, Ansuya; Kerry, John W; Brenneman, Timothy B; Leebens-Mack, James H; Gold, Scott E

    2016-03-01

    Sclerotium rolfsii, a destructive soil-borne fungal pathogen causes stem rot of the cultivated peanut, Arachis hypogaea. This study aimed to identify differentially expressed genes associated with peanut resistance and fungal virulence. Four peanut cultivars (A100-32, Georgia Green, GA-07W and York) with increasing resistance levels were inoculated with a virulent S. rolfsii strain to study the early plant-pathogen interaction. 454 sequencing was performed on RNAs from infected tissue collected at 4 days post inoculation, generating 225,793 high-quality reads. Normalized read counts and fold changes were calculated and statistical analysis used to identify differentially expressed genes. Several genes identified as differential in the RNA-seq experiment were selected based on functions of interest and real-time PCR employed to corroborate their differential expression. Expanding the analysis to include all four cultivars revealed a small but interesting set of genes showing colinearity between cultivar resistance and expression levels. This study identified a set of genes possibly related to pathogen response that may be useful marker assisted selection or transgenic disease control strategies. Additionally, a set of differentially expressed genes that have not been functionally characterized in peanut or other plants and warrant additional investigation were identified.

  14. Passivation of fluorinated activated charcoal

    SciTech Connect

    Del Cul, G.D.; Trowbridge, L.D.; Simmons, D.W.; Williams, D.F.; Toth, L.M.

    1997-10-01

    The Molten Salt Reactor Experiment (MSRE), at the Oak Ridge National Laboratory has been shut down since 1969 when the fuel salt was drained from the core into two Hastelloy N tanks at the reactor site. In 1995, a multiyear project was launched to remediate the potentially hazardous conditions generated by the movement of fissile material and reactive gases from the storage tanks into the piping system and an auxiliary charcoal bed (ACB). The top 12 in. of the ACB is known by gamma scan and thermal analysis to contain about 2.6 kg U-233. According to the laboratory tests, a few feet of fluorinated charcoal are believed to extend beyond the uranium front. The remainder of the ACB should consist of unreacted charcoal. Fluorinated charcoal, when subjected to rapid heating, can decompose generating gaseous products. Under confined conditions, the sudden exothermic decomposition can produce high temperatures and pressures of near-explosive characteristics. Since it will be necessary to drill and tap the ACB to allow installation of piping and instrumentation for remediation and recovery activities, it is necessary to chemically convert the reactive fluorinated charcoal into a more stable material. Ammonia can be administered to the ACB as a volatile denaturing agent that results in the conversion of the C{sub x}F to carbon and ammonium fluoride, NH{sub 4}F. The charcoal laden with NH{sub 4}F can then be heated without risking any sudden decomposition. The only consequence of heating the treated material will be the volatilization of NH{sub 4}F as a mixture of NH{sub 3} and HF, which would primarily recombine as NH{sub 4}F on surfaces below 200 C. The planned scheme for the ACB denaturing is to flow diluted ammonia gas in steps of increasing NH{sub 3} concentration, 2% to 50%, followed by the injection of pure ammonia. This report summarizes the planned passivation treatment scheme to stabilize the ACB and remove the potential hazards. It also includes basic information

  15. Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases

    PubMed Central

    2014-01-01

    Background The basidiomycete Moniliophthora roreri is the causal agent of Frosty pod rot (FPR) disease of cacao (Theobroma cacao), the source of chocolate, and FPR is one of the most destructive diseases of this important perennial crop in the Americas. This hemibiotroph infects only cacao pods and has an extended biotrophic phase lasting up to sixty days, culminating in plant necrosis and sporulation of the fungus without the formation of a basidiocarp. Results We sequenced and assembled 52.3 Mb into 3,298 contigs that represent the M. roreri genome. Of the 17,920 predicted open reading frames (OFRs), 13,760 were validated by RNA-Seq. Using read count data from RNA sequencing of cacao pods at 30 and 60 days post infection, differential gene expression was estimated for the biotrophic and necrotrophic phases of this plant-pathogen interaction. The sequencing data were used to develop a genome based secretome for the infected pods. Of the 1,535 genes encoding putative secreted proteins, 1,355 were expressed in the biotrophic and necrotrophic phases. Analysis of the data revealed secretome gene expression that correlated with infection and intercellular growth in the biotrophic phase and invasive growth and plant cellular death in the necrotrophic phase. Conclusions Genome sequencing and RNA-Seq was used to determine and validate the Moniliophthora roreri genome and secretome. High sequence identity between Moniliophthora roreri genes and Moniliophthora perniciosa genes supports the taxonomic relationship with Moniliophthora perniciosa and the relatedness of this fungus to other basidiomycetes. Analysis of RNA-Seq data from infected plant tissues revealed differentially expressed genes in the biotrophic and necrotrophic phases. The secreted protein genes that were upregulated in the biotrophic phase are primarily associated with breakdown of the intercellular matrix and modification of the fungal mycelia, possibly to mask the fungus from plant defenses. Based on the

  16. Carcinogenic PAH in waterpipe charcoal products.

    PubMed

    Sepetdjian, Elizabeth; Saliba, Najat; Shihadeh, Alan

    2010-11-01

    Because narghile waterpipe (shisha, hooka) smoking normally involves the use of burning charcoal, smoke inhaled by the user contains constituents originating from the charcoal in addition to those from the tobacco. We have previously found that charcoal accounts for most of the polyaromatic hydrocarbons (PAH) and carbon monoxide in the smoke of the waterpipe, both of which are present in alarming quantities. Because charcoal manufacturing conditions favor formation of PAH, it is reasonable to assume that charcoal sold off the shelf may be contaminated by PAH residues. These residues may constitute a significant fraction of the PAH inhaled by the waterpipe user and those in her/his vicinity. We measured PAH residues on three kinds of raw waterpipe charcoal sampled from Beirut stores and cafés. We found that PAH residues in raw charcoal can account for more than half of the total PAH emitted in the mainstream and sidestream smoke, and about one sixth of the carcinogenic 5- and 6-ring PAH compounds. Total PAH content of the three charcoal types varied systematically by a factor of six from the charcoal with the least to the greatest PAH residue. These findings indicate the possibility of regulating charcoal carcinogen content. PMID:20807559

  17. Carcinogenic PAH in waterpipe charcoal products.

    PubMed

    Sepetdjian, Elizabeth; Saliba, Najat; Shihadeh, Alan

    2010-11-01

    Because narghile waterpipe (shisha, hooka) smoking normally involves the use of burning charcoal, smoke inhaled by the user contains constituents originating from the charcoal in addition to those from the tobacco. We have previously found that charcoal accounts for most of the polyaromatic hydrocarbons (PAH) and carbon monoxide in the smoke of the waterpipe, both of which are present in alarming quantities. Because charcoal manufacturing conditions favor formation of PAH, it is reasonable to assume that charcoal sold off the shelf may be contaminated by PAH residues. These residues may constitute a significant fraction of the PAH inhaled by the waterpipe user and those in her/his vicinity. We measured PAH residues on three kinds of raw waterpipe charcoal sampled from Beirut stores and cafés. We found that PAH residues in raw charcoal can account for more than half of the total PAH emitted in the mainstream and sidestream smoke, and about one sixth of the carcinogenic 5- and 6-ring PAH compounds. Total PAH content of the three charcoal types varied systematically by a factor of six from the charcoal with the least to the greatest PAH residue. These findings indicate the possibility of regulating charcoal carcinogen content.

  18. Severe theophylline poisoning: charcoal haemoperfusion or haemodialysis?

    PubMed

    Higgins, R M; Hearing, S; Goldsmith, D J; Keevil, B; Venning, M C; Ackrill, P

    1995-04-01

    Theophylline poisoning with a blood level of 183 mg/l in a 38-year-old man was treated with activated charcoal by mouth, but despite this the blood level of theophylline rose and there was circulatory collapse with rhabdomyolysis, acute renal failure and hyperthermia. Treatment with charcoal haemoperfusion and simultaneous haemodialysis was given, followed by continuous arteriovenous haemodialysis (CAVHD). Mean extraction rates of theophylline were 26% during CAVHD, and 86% during combined dialysis and charcoal haemoperfusion. During combined treatment, the mean extraction rate of haemodialysis was 62%, compared with 48% for charcoal haemoperfusion. In summary, activated charcoal given by mouth may be unable to prevent a rise in blood levels and the development of complications after substantial theophylline overdose. If theophylline is to be removed from the blood, a combination of charcoal haemoperfusion and haemodialysis will give the best clearance, but haemodialysis alone may be effective.

  19. Sorghum recombinant inbred lines segregating for stay-green QTL's and leaf dhurrin content show differential reaction to stalk rot diseases

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The association between post-flowering drought tolerance and the stay-green phenotype in sorghum is well established. More recent studies link the stay-green phenotype with levels of dhurrin and soluble sugars in the leaves. Post-flowering drought response has always been associated with stalk rot r...

  20. Charcoal hemoperfusion in bupropion overdose.

    PubMed

    Akdemir, Hızır Ufuk; Calışkan, Fatih; Duran, Latif; Katı, Celal; Güngörer, Bülent; Ocak, Metin

    2014-10-01

    Bupropion is a relatively new and popular medication for depression, with seizures as its major side effect. In the literature, there are insufficient data about hemodialysis following bupropion overdose. A 23-year-old female patient was brought to our emergency department with acute change in mental status and seizure after deliberate self-poisoning with approximately 25-30 tablets of bupropion hydrochloride. Her Glasgow coma scale score was 8/15. The patient underwent hemodialysis about 4 hours later. After 4 hours of extracorporeal treatment, she became conscious and was extubated. We present a case of full recovery after charcoal hemoperfusion following a bupropion overdose.

  1. Charcoal/Nitrogen Adsorption Cryocooler

    NASA Technical Reports Server (NTRS)

    Bard, Steven

    1987-01-01

    Refrigerator with no wear-related moving parts produces 0.5 W of cooling at 118 K. When fully developed, refrigerator needs no electrical power, and life expectancy of more than 10 yr, operates unattended to cool sensitive infrared detectors for long periods. Only moving parts in adsorption cryocooler are check valves. As charcoal is cooled in canister, gas pressure drops, allowing inlet check valve to open and admit more nitrogen. When canister is heated, pressure rises, closing inlet valve and eventually opening outlet valve.

  2. Monitoring cotton root rot progression within a growing season using airborne multispectral imagery

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot, caused by the fungus Phymatotrichopsis omnivora, is a serious and destructive disease affecting cotton production in the southwestern United States. Accurate delineation of cotton root rot infections is important for cost-effective management of the disease. The objective of this st...

  3. Suppression of maize root diseases caused by Macrophomina phaseolina, Fusarium moniliforme and Fusarium graminearum by plant growth promoting rhizobacteria.

    PubMed

    Pal, K K; Tilak, K V; Saxena, A K; Dey, R; Singh, C S

    2001-01-01

    A plant growth-promoting isolate of a fluorescent Pseudomonas sp. EM85 and two bacilli isolates MR-11(2) and MRF, isolated from maize rhizosphere, were found strongly antagonistic to Fusarium moniliforme, Fusarium graminearum and Macrophomina phaseolina, causal agents of foot rots and wilting, collar rots/stalk rots and root rots and wilting, and charcoal rots of maize, respectively. Pseudomonas sp. EM85 produced antifungal antibiotics (Afa+), siderophore (Sid+), HCN (HCN+) and fluorescent pigments (Flu+) besides exhibiting plant growth promoting traits like nitrogen fixation, phosphate solubilization, and production of organic acids and IAA. While MR-11(2) produced siderophore (Sid+), antibiotics (Afa+) and antifungal volatiles (Afv+), MRF exhibited the production of antifungal antibiotics (Afa+) and siderophores (Sid+). Bacillus spp. MRF was also found to produce organic acids and IAA, solubilized tri-calcium phosphate and fixed nitrogen from the atmosphere. All three isolates suppressed the diseases caused by Fusarium moniliforme, Fusarium graminearum and Macrophomina phaseolina in vitro. A Tn5:: lacZ induced isogenic mutant of the fluorescent Pseudomonas EM85, M23, along with the two bacilli were evaluated for in situ disease suppression of maize. Results indicated that combined application of the two bacilli significantly (P = 0.05) reduced the Macrophomina-induced charcoal rots of maize by 56.04%. Treatments with the MRF isolate of Bacillus spp. and Tn5:: lacZ mutant (M23) of fluorescent Pseudomonas sp. EM85 significantly reduced collar rots, root and foot rots, and wilting of maize caused by Fusarium moniliforme and F. graminearum (P = 0.05) compared to all other treatments. All these isolates were found very efficient in colonizing the rhizotic zones of maize after inoculation. Evaluation of the population dynamics of the fluorescent Pseudomonas sp. EM85 using the Tn5:: lacZ marker and of the Bacillus spp. MRF and MR-11(2) using an antibiotic resistance

  4. CHARCOAL-PRODUCING INDUSTRIES IN NORTHEASTERN BRAZIL

    EPA Science Inventory

    Charcoal workers in northeastern Brazil: Occupational risks and effects of exposure to wood smoke
    ABSTRACT
    Brazil has the largest production of charcoal in the world, which is used mostly in the iron and steel industries. In most of the production sites, the process is ba...

  5. Development of charcoal sorbents for helium cryopumping

    SciTech Connect

    Sedgley, D.W.; Tobin, A.G.

    1985-09-30

    Improved methods for cryopumping helium were developed for application to fusion reactors where high helium generation rates are expected. This study period evaluated charcoal particle size, bonding agent type and thickness, and substrate thickness. The optimum combination of charcoal, bond, and substrate was used to form a scaled-up panel for evaluation in the Tritium Systems Test Assembly (TSTA) at Los Alamos. The optimum combination is a 12 x 30 mesh coconut charcoal attached to a 0.48 cm thick copper substrate by a 0.015 cm thick silver phosphorus copper braze. A copper cement bond for attaching charcoal to a substrate was identified and tested. Helium pumping performance of this combination was comparable to that of the charcoal braze system. Environmental tests showed the charcoal's susceptibility to vacuum chamber contamination. Performance degradation followed exposure of ambient temperature charcoal to a vacuum for prolonged periods. Maintaining a liquid nitrogen-cooled shield between the charcoal and the source of contamination prevented this degradation. A combination of bake-out and LN shielding effected recovery of degraded performance.

  6. Endophytic bacteria from Piper tuberculatum Jacq.: isolation, molecular characterization, and in vitro screening for the control of Fusarium solani f. sp piperis, the causal agent of root rot disease in black pepper (Piper nigrum L.).

    PubMed

    Nascimento, S B; Lima, A M; Borges, B N; de Souza, C R B

    2015-01-01

    Endophytic bacteria have been found to colonize internal tissues in many different plants, where they can have several beneficial effects, including defense against pathogens. In this study, we aimed to identify endophytic bacteria associated with roots of the tropical piperaceae Piper tuberculatum, which is known for its resistance to infection by Fusarium solani f. sp piperis, the causal agent of black pepper (Piper nigrum) root rot disease in the Amazon region. Based on 16S rRNA gene sequence analysis, we isolated endophytes belonging to 13 genera: Bacillus, Paenibacillus, Pseudomonas, Enterobacter, Rhizobium, Sinorhizobium, Agrobacterium, Ralstonia, Serratia, Cupriavidus, Mitsuaria, Pantoea, and Staphylococcus. The results showed that 56.52% of isolates were associated with the phylum Proteobacteria, which comprised α, β, and γ classes. Other bacteria were related to the phylum Firmicutes, including Bacillus, which was the most abundant genus among all isolates. Antagonistic assays revealed that Pt12 and Pt13 isolates, identified as Pseudomonas putida and Pseudomonas sp, respectively, were able to inhibit F. solani f. sp piperis growth in vitro. We describe, for the first time, the molecular identification of 23 endophytic bacteria from P. tuberculatum, among which two Pseudomonas species have the potential to control the pathogen responsible for root rot disease in black pepper in the Amazon region. PMID:26214435

  7. Endophytic bacteria from Piper tuberculatum Jacq.: isolation, molecular characterization, and in vitro screening for the control of Fusarium solani f. sp piperis, the causal agent of root rot disease in black pepper (Piper nigrum L.).

    PubMed

    Nascimento, S B; Lima, A M; Borges, B N; de Souza, C R B

    2015-07-06

    Endophytic bacteria have been found to colonize internal tissues in many different plants, where they can have several beneficial effects, including defense against pathogens. In this study, we aimed to identify endophytic bacteria associated with roots of the tropical piperaceae Piper tuberculatum, which is known for its resistance to infection by Fusarium solani f. sp piperis, the causal agent of black pepper (Piper nigrum) root rot disease in the Amazon region. Based on 16S rRNA gene sequence analysis, we isolated endophytes belonging to 13 genera: Bacillus, Paenibacillus, Pseudomonas, Enterobacter, Rhizobium, Sinorhizobium, Agrobacterium, Ralstonia, Serratia, Cupriavidus, Mitsuaria, Pantoea, and Staphylococcus. The results showed that 56.52% of isolates were associated with the phylum Proteobacteria, which comprised α, β, and γ classes. Other bacteria were related to the phylum Firmicutes, including Bacillus, which was the most abundant genus among all isolates. Antagonistic assays revealed that Pt12 and Pt13 isolates, identified as Pseudomonas putida and Pseudomonas sp, respectively, were able to inhibit F. solani f. sp piperis growth in vitro. We describe, for the first time, the molecular identification of 23 endophytic bacteria from P. tuberculatum, among which two Pseudomonas species have the potential to control the pathogen responsible for root rot disease in black pepper in the Amazon region.

  8. Charcoal and activated carbon at elevated pressure

    SciTech Connect

    Antal, M.J. Jr.; Dai, Xiangfeng; Norberg, N.

    1995-12-01

    High quality charcoal has been produced with very high yields of 50% to 60% from macadamia nut and kukui nut shells and of 44% to 47% from Eucalyptus and Leucaena wood in a bench scale unit at elevated pressure on a 2 to 3 hour cycle, compared to commercial practice of 25% to 30% yield on a 7 to 12 day operating cycle. Neither air pollution nor tar is produced by the process. The effects of feedstock pretreatments with metal additives on charcoal yield are evaluated in this paper. Also, the influences of steam and air partial pressure and total pressure on yields of activated carbon from high yield charcoal are presented.

  9. Field response of some asparagus varieties to rust, Fusarium crown root rot, and violet root rot.

    PubMed

    Fiume, F; Fiume, G

    2003-01-01

    Research was carried out to evaluate the behaviour of some asparagus genotypes against three most important fungal diseases: 1) asparagus rust caused by Puccinia asparagi D.C.; 2) Fusarium crown and root rot caused by Fusarium oxysporum (Schlecht.) f.sp. asparagi (Cohen & Heald) and Fusarium proliferatum (Matstush.) Nirenberg; 3) violet root rot caused by Rhizoctonia violacea Tul. The object of this research was also to found an eventual correlation between the plant susceptibility to asparagus rust and the sensibility to Fusarium crown root rot and violet root rot attacks. Resistant genotypes to rust should be less susceptible to attacks from F. oxysporum f.sp. asparagi, F. proliferatum and R. violacea, a fungal complex causing the plant decline. Asparagus genotypes were compared in a randomized complete block experiment design, replicated four times, in order to search that ones showing the best behaviour to escape the diseases. Phytopathological observations were carried out on November when the control plots showed 100% infected plants. The pathogens were isolated and identified. The diseased plants were registered. According to symptom evaluation scales, all the plants were grouped into infection classes, calculating frequency and McKinney index. Wishing to learn something about the infection trend of F. oxysporum f.sp. asparagi or R. violacea in relation to P. asparagi attack, the relative curvilinear regressions were calculated. The Italian cultivars "Marte" and "Grande" showed significantly the best behaviour in terms of resistance to asparagus rust, exhibiting 37% and 42% of diseased plants. The McKinney index was 9.1% and 15.6%, respectively. The susceptible plots showed 100% of infected plants and different McKinney index: 46% for "Eros", about 60% for "H 519", "Atlas" and "Golia", over 70% for the remainder. "Marte" and "Grande" showed good tolerance to F. oxysporum f.sp. asparagi and to R. violacea exhibiting up to 100% of healthy plants. The

  10. Mapping cotton root rot infestations over a 10-year interval with airborne multispectral imagery

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot, caused by the pathogen Phymatotrichopsis omnivora, is a very serious and destructive disease of cotton grown in the southwestern and south central U.S. Accurate information regarding temporal changes of cotton root rot infestations within fields is important for the management and c...

  11. Preharvest applications of fungicides for control of Sphaeropsis rot in stored apples

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sphaeropsis rot caused by Sphaeropsis pyriputrescens is a recently reported postharvest fruit rot disease of apple in Washington State and causes significant economic losses. Infection of apple fruit by the fungus occurs in the orchard, but decay symptoms develop during storage or in the market. The...

  12. Experimental Sugar Beet Cultivars Evaluated for Resistance Bacterial Root Rot in Idaho, 2008

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bacterial root rot of sugar beet caused by Leuconostoc mesenteroides subsp. dextranicum is a disease problem recently described in the United States. To ameliorate the impact of bacterial root rot on sucrose loss in the field, storage piles, and factories, a study was conducted to identify resistan...

  13. Commercial Sugar Beet Cultivars Evaluated for Resistance to Bacterial Root Rot in Idaho, 2008

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bacterial root rot of sugar beet caused by Leuconostoc mesenteroides subsp. dextranicum is a disease problem recently described in the United States. To ameliorate the impact of bacterial root rot on sucrose loss in the field, storage piles, and factories, a study was conducted to identify resistan...

  14. The persistence of Gliocephalotrichum bulbilium and G. simplex causing fruit rot of rambutan in Puerto Rico

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fruit rot of rambutan (Nephelium lappaceum L.) is a pre and post-harvest disease problem that affects fruit quality. Significant post-harvest losses have occurred worldwide and several pathogens have been identified in Malaysia, Costa Rica, Hawaii, Thailand, and Puerto Rico. In 2011, fruit rot was o...

  15. First report of brown rot on apple fruit caused by Monilinia fructicola in the United States

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Brown rot, caused by Monilinia fructicola (G. Wint.) Honey, is the most devastating disease of stone fruits in North America resulting in significant economic losses. The fungus has been recently reported to cause pre and postharvest brown rot on apple fruit in Germany, Italy, and Serbia. However, M...

  16. 49 CFR 176.405 - Stowage of charcoal.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 49 Transportation 2 2014-10-01 2014-10-01 false Stowage of charcoal. 176.405 Section 176.405... Materials § 176.405 Stowage of charcoal. (a) Before stowing charcoal Division 4.2 (flammable solid), UN 1361... petroleum product, a vegetable or animal oil, nitrate, or sulfur, must be removed. (b) Charcoal packed...

  17. 49 CFR 176.405 - Stowage of charcoal.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 49 Transportation 2 2011-10-01 2011-10-01 false Stowage of charcoal. 176.405 Section 176.405... Materials § 176.405 Stowage of charcoal. (a) Before stowing charcoal Division 4.2 (flammable solid), UN 1361... petroleum product, a vegetable or animal oil, nitrate, or sulfur, must be removed. (b) Charcoal packed...

  18. 49 CFR 176.405 - Stowage of charcoal.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 49 Transportation 2 2010-10-01 2010-10-01 false Stowage of charcoal. 176.405 Section 176.405... Materials § 176.405 Stowage of charcoal. (a) Before stowing charcoal Division 4.2 (flammable solid), UN 1361... petroleum product, a vegetable or animal oil, nitrate, or sulfur, must be removed. (b) Charcoal packed...

  19. 49 CFR 176.405 - Stowage of charcoal.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 2 2013-10-01 2013-10-01 false Stowage of charcoal. 176.405 Section 176.405... Materials § 176.405 Stowage of charcoal. (a) Before stowing charcoal Division 4.2 (flammable solid), UN 1361... petroleum product, a vegetable or animal oil, nitrate, or sulfur, must be removed. (b) Charcoal packed...

  20. 49 CFR 176.405 - Stowage of charcoal.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 49 Transportation 2 2012-10-01 2012-10-01 false Stowage of charcoal. 176.405 Section 176.405... Materials § 176.405 Stowage of charcoal. (a) Before stowing charcoal Division 4.2 (flammable solid), UN 1361... petroleum product, a vegetable or animal oil, nitrate, or sulfur, must be removed. (b) Charcoal packed...

  1. Spatiotemporal characterization of Sclerotinia crown rot epidemics in pyrethrum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sclerotinia crown rot, caused by Sclerotinia minor and S. sclerotiorum is a disease of pyrethrum in Australia that may cause substantial decline in plant density. The spatiotemporal characteristics of the disease were quantified in 14 fields spread across three growing seasons. Fitting the binary ...

  2. Detecting cotton boll rot with an electronic nose

    Technology Transfer Automated Retrieval System (TEKTRAN)

    South Carolina Boll Rot is an emerging disease of cotton, Gossypium hirsutum L., caused by the opportunistic bacteria, Pantoea agglomerans (Ewing and Fife). Unlike typical fungal diseases, bolls infected with P. agglomerans continue to appear normal externally, complicating early and rapid detectio...

  3. Phytophthora root rot resistance in soybean E00003

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phytophthora root rot (PRR), caused by the oomycete Phytophthora sojae, is a devastating disease in soybean production. Using resistant cultivars has been suggested as the best solution for disease management. Michigan elite soybean E00003 is resistant to P. sojae and has been used as a PRR resist...

  4. Etiology and Epidemiological Conditions Promoting Fusarium Root Rot in Sweetpotato.

    PubMed

    Scruggs, A C; Quesada-Ocampo, L M

    2016-08-01

    Sweetpotato production in the United States is limited by several postharvest diseases, and one of the most common is Fusarium root rot. Although Fusarium solani is believed to be the primary causal agent of disease, numerous other Fusarium spp. have been reported to infect sweetpotato. However, the diversity of Fusarium spp. infecting sweetpotato in North Carolina is unknown. In addition, the lack of labeled and effective fungicides for control of Fusarium root rot in sweetpotato creates the need for integrated strategies to control disease. Nonetheless, epidemiological factors that promote Fusarium root rot in sweetpotato remain unexplored. A survey of Fusarium spp. infecting sweetpotato in North Carolina identified six species contributing to disease, with F. solani as the primary causal agent. The effects of storage temperature (13, 18, 23, 29, and 35°C), relative humidity (80, 90, and 100%), and initial inoculum level (3-, 5-, and 7-mm-diameter mycelia plug) were examined for progression of Fusarium root rot caused by F. solani and F. proliferatum on 'Covington' sweetpotato. Fusarium root rot was significantly reduced (P < 0.05) at lower temperatures (13°C), low relative humidity levels (80%), and low initial inoculum levels for both pathogens. Sporulation of F. proliferatum was also reduced under the same conditions. Qualitative mycotoxin analysis of roots infected with one of five Fusarium spp. revealed the production of fumonisin B1 by F. proliferatum when infecting sweetpotato. This study is a step toward characterizing the etiology and epidemiology of Fusarium root rot in sweetpotato, which allows for improved disease management recommendations to limit postharvest losses to this disease.

  5. Development of an incineration system for pulverized spent charcoal

    SciTech Connect

    Furukawa, Osamu; Shibata, Minoru; Kani, Koichi

    1995-12-31

    In the existing charcoal treatment system granular charcoal is charged directly into an incinerator together with other combustible waste. Since the combustion rate of the charcoal is slow in this system, there is a problem that unburnt charcoal accumulates at the bottom of the incinerator, when incineration is performed for an extended period of time. To prevent this difficulty, the combustion rate of the charcoal must be limited to 6 kg/h. To increase the incineration rate of charcoal, the authors have developed a system in which the charcoal is pulverized and incinerated while it is mixed with propane gas. The operational performance of this system was tested using an actual equipment.

  6. Mechanically robust, chemically inert superhydrophobic charcoal surfaces.

    PubMed

    Xie, Jian-Bo; Li, Liang; Knyazeva, Anastassiya; Weston, James; Naumov, Panče

    2016-08-11

    We report a fast and cost-effective strategy towards the preparation of superhydrophobic composites where a double-sided adhesive tape is paved with charcoal particles. The composites are mechanically robust, and resistant to strong chemical agents. PMID:27405255

  7. Kinetics of drug action in disease states. XXXIX. Effect of orally administered activated charcoal on the hypnotic activity of phenobarbital and the neurotoxicity of theophylline administered intravenously to rats with renal failure.

    PubMed

    Hoffman, A; Levy, G

    1990-03-01

    The central nervous system (CNS) sensitivity to the hypnotic (general anesthetic) action of phenobarbital and to the neurotoxic (convulsive) action of theophylline is greater in rats with acute renal failure than in normal animals, consistent with clinical observations. In the case of phenobarbital, this increased sensitivity can be produced in normal rats by infusion of a solution of the lyophilized dialysate of serum from rats with renal failure. It was hypothesized that the relevant constituent(s) of this dialysate may circulate between the blood and the intestinal lumen and that it (they) can be adsorbed by orally administered activated charcoal and thereby removed from the body. If so, treatment of renal failure rats with activated charcoal should partly reverse the increased CNS sensitivity to phenobarbital and to other drugs similarly affected. Accordingly, rats with renal failure produced by bilateral ligation of ureters were given an aqueous suspension of activated charcoal, about 1 g per kg body weight, orally every 8 hr for six doses. Uremic controls received equal volumes of water. About 2 hr after the last dose, the animals were infused i.v. with phenobarbital to onset of loss of righting reflex or with theophylline to onset of maximal seizures. In the phenobarbital study, charcoal treatment partly reversed the hypothermia associated with renal failure and caused a reduction of creatinine and total bilirubin concentrations in serum. The cerebrospinal fluid (CSF) concentration of phenobarbital at onset of loss of the righting reflex was significantly higher in charcoal treated rats than in their controls.(ABSTRACT TRUNCATED AT 250 WORDS)

  8. Mapping the Legacies of Historic Charcoal Production

    NASA Astrophysics Data System (ADS)

    Schneider, A.; Raab, A.; Raab, T. A.; Takla, M.; Nicolay, A.; Rösler, H.

    2014-12-01

    The historic production of charcoal is an important component of the late Holocene fire history for many landscapes. Charcoal production can have numerous effects on ecosystems, e.g., through changes in forest area and structure, or through the effects of pyrolysis, charcoal and ash addition to soils. To assess such effects, it is necessary to understand the spatial extent and patterns of historic charcoal production, which has so far hardly been approached for the Northern European Lowlands. In the forefield of the open-cast mine Jänschwalde (north of Cottbus, Germany), archaeological excavations have revealed one of the largest charcoal production fields described so far. For this area, we applied and evaluated different methods for mapping the spatial distribution of charcoal kiln remains. We present methods and results of our work in this exceptionally well-described charcoal production field and of additional studies on kiln site distribution in regions of the Northern European Lowlands. The large-scale excavations in the mine forefield provide exact information on kiln site geometry. Using airborne laser scanning elevation models, the mapping of kiln sites could be extended to areas beyond the mine forefield. To detect kiln sites for larger areas, an automated GIS based mapping routine, based on a combination of morphometric parameters, was developed and evaluated. By manual digitization from Shaded Relief Maps, more than 5000 kiln sites in an area of 32 km2 were detected in the Jänschwalde mine forefield, with 1355 kiln sites that are wider than 12 m. These relatively large kiln sites could be mapped with detection rates that are close to those of manual digitization using the automated routine. First results for different study areas indicate that charcoal production is a so far underestimated component of the land use history in many parts of the Northern European Lowlands.

  9. Fluidized bed charcoal particle production system

    SciTech Connect

    Sowards, N.K.

    1985-04-09

    A fluidized bed charcoal particle production system, including apparatus and method, wherein pieces of combustible waste, such as sawdust, fragments of wood, etc., are continuously disposed within a fluidized bed of a pyrolytic vessel. Preferably, the fluidized bed is caused to reach operating temperatures by use of an external pre-heater. The fluidized bed is situated above an air delivery system at the bottom of the vessel, which supports pyrolysis within the fluidized bed. Charcoal particles are thus formed within the bed from the combustible waste and are lifted from the bed and placed in suspension above the bed by forced air passing upwardly through the bed. The suspended charcoal particles and the gaseous medium in which the particles are suspended are displaced from the vessel into a cyclone mechanism where the charcoal particles are separated. The separated charcoal particles are quenched with water to terminate all further charcoal oxidation. The remaining off-gas is burned and, preferably, the heat therefrom used to generate steam, kiln dry lumber, etc. Preferably, the bed material is continuously recirculated and purified by removing tramp material.

  10. Expression of the β-1,3-glucanase gene bgn13.1 from Trichoderma harzianum in strawberry increases tolerance to crown rot diseases but interferes with plant growth.

    PubMed

    Mercado, José A; Barceló, Marta; Pliego, Clara; Rey, Manuel; Caballero, José L; Muñoz-Blanco, Juan; Ruano-Rosa, David; López-Herrera, Carlos; de Los Santos, Berta; Romero-Muñoz, Fernando; Pliego-Alfaro, Fernando

    2015-12-01

    The expression of antifungal genes from Trichoderma harzianum, mainly chitinases, has been used to confer plant resistance to fungal diseases. However, the biotechnological potential of glucanase genes from Trichoderma has been scarcely assessed. In this research, transgenic strawberry plants expressing the β-1,3-glucanase gene bgn13.1 from T. harzianum, under the control of the CaMV35S promoter, have been generated. After acclimatization, five out of 12 independent lines analysed showed a stunted phenotype when growing in the greenhouse. Moreover, most of the lines displayed a reduced yield due to both a reduction in the number of fruit per plant and a lower fruit size. Several transgenic lines showing higher glucanase activity in leaves than control plants were selected for pathogenicity tests. When inoculated with Colletotrichum acutatum, one of the most important strawberry pathogens, transgenic lines showed lower anthracnose symptoms in leaf and crown than control. In the three lines selected, the percentage of plants showing anthracnose symptoms in crown decreased from 61 % to a mean value of 16.5 %, in control and transgenic lines, respectively. Some transgenic lines also showed an enhanced resistance to Rosellinia necatrix, a soil-borne pathogen causing root and crown rot in strawberry. These results indicate that bgn13.1 from T. harzianum can be used to increase strawberry tolerance to crown rot diseases, although its constitutive expression affects plant growth and fruit yield. Alternative strategies such as the use of tissue specific promoters might avoid the negative effects of bgn13.1 expression in plant performance. PMID:26178245

  11. Expression of the β-1,3-glucanase gene bgn13.1 from Trichoderma harzianum in strawberry increases tolerance to crown rot diseases but interferes with plant growth.

    PubMed

    Mercado, José A; Barceló, Marta; Pliego, Clara; Rey, Manuel; Caballero, José L; Muñoz-Blanco, Juan; Ruano-Rosa, David; López-Herrera, Carlos; de Los Santos, Berta; Romero-Muñoz, Fernando; Pliego-Alfaro, Fernando

    2015-12-01

    The expression of antifungal genes from Trichoderma harzianum, mainly chitinases, has been used to confer plant resistance to fungal diseases. However, the biotechnological potential of glucanase genes from Trichoderma has been scarcely assessed. In this research, transgenic strawberry plants expressing the β-1,3-glucanase gene bgn13.1 from T. harzianum, under the control of the CaMV35S promoter, have been generated. After acclimatization, five out of 12 independent lines analysed showed a stunted phenotype when growing in the greenhouse. Moreover, most of the lines displayed a reduced yield due to both a reduction in the number of fruit per plant and a lower fruit size. Several transgenic lines showing higher glucanase activity in leaves than control plants were selected for pathogenicity tests. When inoculated with Colletotrichum acutatum, one of the most important strawberry pathogens, transgenic lines showed lower anthracnose symptoms in leaf and crown than control. In the three lines selected, the percentage of plants showing anthracnose symptoms in crown decreased from 61 % to a mean value of 16.5 %, in control and transgenic lines, respectively. Some transgenic lines also showed an enhanced resistance to Rosellinia necatrix, a soil-borne pathogen causing root and crown rot in strawberry. These results indicate that bgn13.1 from T. harzianum can be used to increase strawberry tolerance to crown rot diseases, although its constitutive expression affects plant growth and fruit yield. Alternative strategies such as the use of tissue specific promoters might avoid the negative effects of bgn13.1 expression in plant performance.

  12. New emission controls for Missouri batch-type charcoal kilns

    SciTech Connect

    Yronwode, P.; Graf, W.J.

    1999-07-01

    Charcoal kilns have been exempted from air emission regulation in the state of Missouri. Today, 80% of US charcoal production takes place in Missouri. As a result of a petition filed by people in the area around an installation in southern Missouri, the US Environmental Protection Agency (EPA) set up air monitors and measured ambient air levels at that charcoal manufacturing installation. These monitors yielded the highest particulate matter less than 10 micron (PM{sub 10}) levels ever recorded in the state. Earlier stack testing at another charcoal manufacturing installation indicated that toxics and carcinogens are present in charcoal kiln air emissions. A Charcoal Kiln Workgroup was formed to determine the Best Available Control Technology (BACT) for charcoal kilns and to draft a charcoal kiln rule that requires BACT. The BACT report determined that afterburners were suitable for controlling emissions from batch-type charcoal kilns. In addition, the charcoal industry supported incorporating the BACT limits and requirements into an enforceable state rule and submitting this rule to the EPA for federal approval. A consent agreement between the EPA and three major charcoal companies was signed with provisions to install, operate, and maintain emission control devices on charcoal kilns. This agreement was to settle complaints alleging that the three major charcoal producers had failed to report toxic air emissions to federal and state regulators. The agreement provided that industry would install control devices on a set schedule with some charcoal kilns being shut down.

  13. First report of Lasiodiplodia theobromae causing inflorescence blight and fruit rot of longan (Dimocarpus longan L.) in Puerto Rico

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Longan is a tropical fruit tree in the Sapindaceae family. During a disease survey from 2008 to 2010, fruit rot and inflorescence blight (rotting of the rachis, rachilla and flowers) were observed at the USDA-ARS Research Farm in Isabela, Puerto Rico. Tissue sections (1 mm2) of diseased inflorescenc...

  14. Effect of activated charcoal on the pharmacokinetics of pholcodine, with special reference to delayed charcoal ingestion.

    PubMed

    Laine, K; Kivistö, K T; Ojala-Karlsson, P; Neuvonen, P J

    1997-02-01

    We conducted a randomized study with four parallel groups to investigate the effect of single and multiple doses of activated charcoal on the absorption and elimination of pholcodine administered in a cough syrup. The first group received 100 mg of pholcodine on an empty stomach with water only (control); the second group took 25 g of activated charcoal immediately after pholcodine; the third group received 25 g of activated charcoal 2 h and the fourth group 5 h after ingestion of the 100-mg dose of pholcodine. In addition, the fourth group received multiple doses (10 g each) of charcoal every 12 h for 84 h. Blood samples were collected for 96 h and urine for 72 h. Pholcodine concentrations were measured by high-performance liquid chromatography. A significant reduction in absorption was found when charcoal was administered immediately after pholcodine; the AUC0-96h was reduced by 91% (p < 0.0005), the Cmax by 77% (p < 0.0005), and the amount of pholcodine excreted into urine by 85% (p < 0.0005). When charcoal was administered 2 h after pholcodine, the AUC0-96h was reduced by 26% (p = 0.002), the Cmax by 23% (p = NS), and the urinary excretion by 28% (p = 0.004). When administered 5 h after pholcodine, charcoal produced only a 17% reduction in the AUC0-96h (p = 0.06), but reduced the further absorption of pholcodine still present in the gastrointestinal tract at the time of charcoal administration, as measured by AUC5-96h (p = 0.006). Repeated administration of charcoal failed to accelerate the elimination of pholcodine. We conclude that activated charcoal is effective in preventing the absorption of pholcodine, and its administration can be beneficial even several hours after pholcodine ingestion. PMID:9029746

  15. Effect of activated charcoal on the pharmacokinetics of pholcodine, with special reference to delayed charcoal ingestion.

    PubMed

    Laine, K; Kivistö, K T; Ojala-Karlsson, P; Neuvonen, P J

    1997-02-01

    We conducted a randomized study with four parallel groups to investigate the effect of single and multiple doses of activated charcoal on the absorption and elimination of pholcodine administered in a cough syrup. The first group received 100 mg of pholcodine on an empty stomach with water only (control); the second group took 25 g of activated charcoal immediately after pholcodine; the third group received 25 g of activated charcoal 2 h and the fourth group 5 h after ingestion of the 100-mg dose of pholcodine. In addition, the fourth group received multiple doses (10 g each) of charcoal every 12 h for 84 h. Blood samples were collected for 96 h and urine for 72 h. Pholcodine concentrations were measured by high-performance liquid chromatography. A significant reduction in absorption was found when charcoal was administered immediately after pholcodine; the AUC0-96h was reduced by 91% (p < 0.0005), the Cmax by 77% (p < 0.0005), and the amount of pholcodine excreted into urine by 85% (p < 0.0005). When charcoal was administered 2 h after pholcodine, the AUC0-96h was reduced by 26% (p = 0.002), the Cmax by 23% (p = NS), and the urinary excretion by 28% (p = 0.004). When administered 5 h after pholcodine, charcoal produced only a 17% reduction in the AUC0-96h (p = 0.06), but reduced the further absorption of pholcodine still present in the gastrointestinal tract at the time of charcoal administration, as measured by AUC5-96h (p = 0.006). Repeated administration of charcoal failed to accelerate the elimination of pholcodine. We conclude that activated charcoal is effective in preventing the absorption of pholcodine, and its administration can be beneficial even several hours after pholcodine ingestion.

  16. Handbook of charcoal making: the traditional and industrial methods

    SciTech Connect

    Emrich, W.

    1985-01-01

    The reviewer credits this handbook with expanding knowledge about the economic value of charcoal, particularly in the European area. The 10 chapters are: (1) history and fundamentals of the charcoal process, (2) traditional methods of the smallholder producer, (3) concepts and technology for the industrial producer, (4) recovering commercial products from pyrolysis oil, (5) raw materials supply, (6) end-use markets for by-products, (7) planning a charcoal venture, (8) charcoal briquettes and activated charcoal, (9) safety precautions and environmental considerations, and (10) charcoal laboratory work. Each chapter lists references. There are four appendices.

  17. Huanglongbing increases Diplodia Stem End Rot in Citrus sinensis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Huanglongbing (HLB), one of the most devastating diseases of citrus is caused by the a-Proteobacteria Candidatus Liberibacter. Diplodia natalensis Pole-Evans is a fungal pathogen which has been known to cause a postharvest stem-end rot of citrus, the pathogen infects citrus fruit under the calyx, an...

  18. Root rots of common and tepary beans in Puerto Rico

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Root rots are a disease complex affecting common bean and can be severe in bean growing areas in the tropics and subtropics. The presence of several pathogens makes it difficult to breed for resistance because of the synergistic effect of the pathogens in the host and the interaction of soil factors...

  19. Heritability of fruit rot resistance in American cranberry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fruit rot is the primary threat to cranberry production in the northeastern U.S., and increasingly in other growing regions. Efficacy of chemical control is variable since the disease is caused by a complex of pathogenic fungi. In addition, cranberries are often grown in environmentally sensitive ar...

  20. Biocontrol of collar rot disease of betelvine (Piper betle L.) caused by Sclerotium rolfsii by using rhizosphere-competent Pseudomonas fluorescens NBRI-N6 and P. fluorescens NBRI-N.

    PubMed

    Singh, Anand; Mehta, Sangeeta; Singh, Harikesh Bahadur; Nautiyal, Chandra Shekhar

    2003-08-01

    Collar rot disease of betelvine (Piper betle L.) caused by Sclerotium rolfsii is difficult to control by conventional means by use of chemicals; therefore, use of biocontrol agents is desirable. In the present study, 186 bacterial strains of different morphological types were screened for their biocontrol activity against S. rolfsii under in vitro conditions. Two strains, Pseudomonas fluorescens NBRI-N6 and P. fluorescens NBRI-N, were selected for further studies because of their ability to inhibit the mycelial growth of the pathogen significantly. Spontaneous rifampicin-resistant (Rif) derivatives of P. fluorescens NBRI-N6 and P. fluorescens NBRI-N showing growth rate and membrane protein composition comparable to the wild type were selected to facilitate their monitoring in the rhizosphere. Field trials demonstrated that strain P. fluorescens NBRI-N6 was better than P. fluorescens NBRI-N in increasing the yield of betelvine significantly, whereas a consortium of the two strains controlled the disease more than either of the strains. The screening method should prove useful in identifying rhizosphere bacteria with the greatest potential for controlling diseases caused by phytopathogenic fungi. PMID:14506865

  1. Recovery of Technetium Adsorbed on Charcoal

    SciTech Connect

    Engelmann, Mark D.; Metz, Lori A.; Ballou, Nathan E.

    2006-05-01

    Two methods capable of near complete recovery of technetium adsorbed on charcoal are presented. The first involves liquid extraction of the technetium from the charcoal by hot 4M nitric acid. An average recovery of 98% (n=3) is obtained after three rounds of extraction. The second method involves dry ashing with air in a quartz combustion tube at 400-450 C. This method yields an average recovery of 96% (n=5). Other thermal methods were attempted, but resulted in reduced recovery and incomplete material balance

  2. 7 CFR 29.6039 - Stem rot.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 2 2013-01-01 2013-01-01 false Stem rot. 29.6039 Section 29.6039 Agriculture... INSPECTION Standards Definitions § 29.6039 Stem rot. The deterioration of an uncured or frozen stem resulting from bacterial action. Although stem rot results from bacterial action, it is inactive in cured...

  3. 7 CFR 29.6039 - Stem rot.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 2 2011-01-01 2011-01-01 false Stem rot. 29.6039 Section 29.6039 Agriculture... INSPECTION Standards Definitions § 29.6039 Stem rot. The deterioration of an uncured or frozen stem resulting from bacterial action. Although stem rot results from bacterial action, it is inactive in cured...

  4. 7 CFR 29.6039 - Stem rot.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Stem rot. 29.6039 Section 29.6039 Agriculture... INSPECTION Standards Definitions § 29.6039 Stem rot. The deterioration of an uncured or frozen stem resulting from bacterial action. Although stem rot results from bacterial action, it is inactive in cured...

  5. 7 CFR 29.6039 - Stem rot.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 2 2012-01-01 2012-01-01 false Stem rot. 29.6039 Section 29.6039 Agriculture... INSPECTION Standards Definitions § 29.6039 Stem rot. The deterioration of an uncured or frozen stem resulting from bacterial action. Although stem rot results from bacterial action, it is inactive in cured...

  6. 7 CFR 29.6039 - Stem rot.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 2 2014-01-01 2014-01-01 false Stem rot. 29.6039 Section 29.6039 Agriculture... INSPECTION Standards Definitions § 29.6039 Stem rot. The deterioration of an uncured or frozen stem resulting from bacterial action. Although stem rot results from bacterial action, it is inactive in cured...

  7. Characterization of Cichopeptins, New Phytotoxic Cyclic Lipodepsipeptides Produced by Pseudomonas cichorii SF1-54 and Their Role in Bacterial Midrib Rot Disease of Lettuce.

    PubMed

    Huang, Chien-Jui; Pauwelyn, Ellen; Ongena, Marc; Debois, Delphine; Leclère, Valerie; Jacques, Philippe; Bleyaert, Peter; Höfte, Monica

    2015-09-01

    The lettuce midrib rot pathogen Pseudomonas cichorii SF1-54 produces seven bioactive compounds with biosurfactant properties. Two compounds exhibited necrosis-inducing activity on chicory leaves. The structure of the two phytotoxic compounds, named cichopeptin A and B, was tentatively characterized. They are related cyclic lipopeptides composed of an unsaturated C12-fatty acid chain linked to the N-terminus of a 22-amino acid peptide moiety. Cichopeptin B differs from cichopeptin A only in the last C-terminal amino acid residue, which is probably Val instead of Leu/Ile. Based on peptide sequence similarity, cichopeptins are new cyclic lipopeptides related to corpeptin, produced by the tomato pathogen Pseudomonas corrugata. Production of cichopeptin is stimulated by glycine betaine but not by choline, an upstream precursor of glycine betaine. Furthermore, a gene cluster encoding cichopeptin synthethases, cipABCDEF, is responsible for cichopeptin biosynthesis. A cipA-deletion mutant exhibited significantly less virulence and rotten midribs than the parental strain upon spray inoculation on lettuce. However, the parental and mutant strains multiplied in lettuce leaves at a similar rate. These results demonstrate that cichopeptins contribute to virulence of P. cichorii SF1-54 on lettuce. PMID:25961750

  8. Cellular Tracking and Gene Profiling of Fusarium graminearum during Maize Stalk Rot Disease Development Elucidates Its Strategies in Confronting Phosphorus Limitation in the Host Apoplast.

    PubMed

    Zhang, Yan; He, Juan; Jia, Lei-Jie; Yuan, Ting-Lu; Zhang, Dong; Guo, Yan; Wang, Yufeng; Tang, Wei-Hua

    2016-03-01

    The ascomycete fungus Fusarium graminearum causes stalk rot in maize. We tracked this pathogen's growth in wound-inoculated maize stalks using a fluorescence-labeled fungal isolate and observed that invasive hyphae grew intercellularly up to 24 h post inoculation, grew intra- and inter-cellularly between 36-48 h, and fully occupied invaded cells after 72 h. Using laser microdissection and microarray analysis, we profiled changes in global gene expression during pathogen growth inside pith tissues of maize stalk from 12 h to six days after inoculation and documented transcriptomic patterns that provide further insights into the infection process. Expression changes in transcripts encoding various plant cell wall degrading enzymes appeared to correlate with inter- and intracellular hyphal growth. Genes associated with 36 secondary metabolite biosynthesis clusters were expressed. Expression of several F. graminearum genes potentially involved in mobilization of the storage lipid triacylglycerol and phosphorus-free lipid biosynthesis were induced during early infection time points, and deletion of these genes caused reduction of virulence in maize stalk. Furthermore, we demonstrated that the F. graminearum betaine lipid synthase 1 (BTA1) gene was necessary and sufficient for production of phosphorus-free membrane lipids, and that deletion of BTA1 interfered with F. graminearum's ability to advance intercellularly. We conclude that F. graminearum produces phosphorus-free membrane lipids to adapt to a phosphate-limited extracellular microenvironment during early stages of its invasion of maize stalk. PMID:26974960

  9. Characterization of Cichopeptins, New Phytotoxic Cyclic Lipodepsipeptides Produced by Pseudomonas cichorii SF1-54 and Their Role in Bacterial Midrib Rot Disease of Lettuce.

    PubMed

    Huang, Chien-Jui; Pauwelyn, Ellen; Ongena, Marc; Debois, Delphine; Leclère, Valerie; Jacques, Philippe; Bleyaert, Peter; Höfte, Monica

    2015-09-01

    The lettuce midrib rot pathogen Pseudomonas cichorii SF1-54 produces seven bioactive compounds with biosurfactant properties. Two compounds exhibited necrosis-inducing activity on chicory leaves. The structure of the two phytotoxic compounds, named cichopeptin A and B, was tentatively characterized. They are related cyclic lipopeptides composed of an unsaturated C12-fatty acid chain linked to the N-terminus of a 22-amino acid peptide moiety. Cichopeptin B differs from cichopeptin A only in the last C-terminal amino acid residue, which is probably Val instead of Leu/Ile. Based on peptide sequence similarity, cichopeptins are new cyclic lipopeptides related to corpeptin, produced by the tomato pathogen Pseudomonas corrugata. Production of cichopeptin is stimulated by glycine betaine but not by choline, an upstream precursor of glycine betaine. Furthermore, a gene cluster encoding cichopeptin synthethases, cipABCDEF, is responsible for cichopeptin biosynthesis. A cipA-deletion mutant exhibited significantly less virulence and rotten midribs than the parental strain upon spray inoculation on lettuce. However, the parental and mutant strains multiplied in lettuce leaves at a similar rate. These results demonstrate that cichopeptins contribute to virulence of P. cichorii SF1-54 on lettuce.

  10. Cellular Tracking and Gene Profiling of Fusarium graminearum during Maize Stalk Rot Disease Development Elucidates Its Strategies in Confronting Phosphorus Limitation in the Host Apoplast

    PubMed Central

    Jia, Lei-Jie; Yuan, Ting-Lu; Zhang, Dong; Guo, Yan; Wang, Yufeng; Tang, Wei-Hua

    2016-01-01

    The ascomycete fungus Fusarium graminearum causes stalk rot in maize. We tracked this pathogen’s growth in wound-inoculated maize stalks using a fluorescence-labeled fungal isolate and observed that invasive hyphae grew intercellularly up to 24 h post inoculation, grew intra- and inter-cellularly between 36–48 h, and fully occupied invaded cells after 72 h. Using laser microdissection and microarray analysis, we profiled changes in global gene expression during pathogen growth inside pith tissues of maize stalk from 12 h to six days after inoculation and documented transcriptomic patterns that provide further insights into the infection process. Expression changes in transcripts encoding various plant cell wall degrading enzymes appeared to correlate with inter- and intracellular hyphal growth. Genes associated with 36 secondary metabolite biosynthesis clusters were expressed. Expression of several F. graminearum genes potentially involved in mobilization of the storage lipid triacylglycerol and phosphorus-free lipid biosynthesis were induced during early infection time points, and deletion of these genes caused reduction of virulence in maize stalk. Furthermore, we demonstrated that the F. graminearum betaine lipid synthase 1 (BTA1) gene was necessary and sufficient for production of phosphorus-free membrane lipids, and that deletion of BTA1 interfered with F. graminearum’s ability to advance intercellularly. We conclude that F. graminearum produces phosphorus-free membrane lipids to adapt to a phosphate-limited extracellular microenvironment during early stages of its invasion of maize stalk. PMID:26974960

  11. Cellular Tracking and Gene Profiling of Fusarium graminearum during Maize Stalk Rot Disease Development Elucidates Its Strategies in Confronting Phosphorus Limitation in the Host Apoplast.

    PubMed

    Zhang, Yan; He, Juan; Jia, Lei-Jie; Yuan, Ting-Lu; Zhang, Dong; Guo, Yan; Wang, Yufeng; Tang, Wei-Hua

    2016-03-01

    The ascomycete fungus Fusarium graminearum causes stalk rot in maize. We tracked this pathogen's growth in wound-inoculated maize stalks using a fluorescence-labeled fungal isolate and observed that invasive hyphae grew intercellularly up to 24 h post inoculation, grew intra- and inter-cellularly between 36-48 h, and fully occupied invaded cells after 72 h. Using laser microdissection and microarray analysis, we profiled changes in global gene expression during pathogen growth inside pith tissues of maize stalk from 12 h to six days after inoculation and documented transcriptomic patterns that provide further insights into the infection process. Expression changes in transcripts encoding various plant cell wall degrading enzymes appeared to correlate with inter- and intracellular hyphal growth. Genes associated with 36 secondary metabolite biosynthesis clusters were expressed. Expression of several F. graminearum genes potentially involved in mobilization of the storage lipid triacylglycerol and phosphorus-free lipid biosynthesis were induced during early infection time points, and deletion of these genes caused reduction of virulence in maize stalk. Furthermore, we demonstrated that the F. graminearum betaine lipid synthase 1 (BTA1) gene was necessary and sufficient for production of phosphorus-free membrane lipids, and that deletion of BTA1 interfered with F. graminearum's ability to advance intercellularly. We conclude that F. graminearum produces phosphorus-free membrane lipids to adapt to a phosphate-limited extracellular microenvironment during early stages of its invasion of maize stalk.

  12. Charcoal from the pyrolysis of rapeseed plant straw-stalk

    SciTech Connect

    Karaosmanoglu, F.; Tetik, E.

    1999-07-01

    Charcoal is an important product of pyrolysis of biomass sources. Charcoal can be used for domestic, agricultural, metallurgical, and chemical purposes. In this study different characteristics of charcoal, one of the rape seed plant straw-stalk pyrolysis product, was researched and presented as candidates.

  13. Emissions of air pollutants from indoor charcoal barbecue.

    PubMed

    Huang, Hsiao-Lin; Lee, Whei-May Grace; Wu, Feng-Shu

    2016-01-25

    Ten types of commercial charcoal commonly used in Taiwan were investigated to study the potential health effects of air pollutants generated during charcoal combustion in barbecue restaurants. The charcoal samples were combusted in a tubular high-temperature furnace to simulate the high-temperature charcoal combustion in barbecue restaurants. The results indicated that traditional charcoal has higher heating value than green synthetic charcoal. The amount of PM10 and PM2.5 emitted during the smoldering stage increased when the burning temperature was raised. The EF for CO and CO2 fell within the range of 68-300 and 644-1225 g/kg, respectively. Among the charcoals, the lowest EF for PM2.5 and PM10 were found in Binchōtan (B1). Sawdust briquette charcoal (I1S) emitted the smallest amount of carbonyl compounds. Charcoal briquettes (C2S) emitted the largest amount of air pollutants during burning, with the EF for HC, PM2.5, PM10, formaldehyde, and acetaldehyde being the highest among the charcoals studied. The emission of PM2.5, PM10, formaldehyde, and acetaldehyde were 5-10 times those of the second highest charcoal. The results suggest that the adverse effects of the large amounts of air pollutants generated during indoor charcoal combustion on health and indoor air quality must not be ignored.

  14. Sawdust and Charcoal: Fuel for Raku.

    ERIC Educational Resources Information Center

    Brisson, Harriet E.

    1980-01-01

    Raku is an ancient Japanese process of firing pottery in which the bisqued piece is glazed and placed in a preheated kiln. Described are the benefits of substituting sawdust and charcoal for firing pottery by those people who do not have access to a kiln. (KC)

  15. Effect of cultural practices and fungicide treatments on the severity of Phytophthora root rot of blueberries grown in Mississippi

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Effect of cultural practices and fungicide treatments on the severity of Phytophthora root rot of blueberries grown in Mississippi Melinda Miller-Butler and Barbara J. Smith ABSTRACT. Phytophthora root rot is an important disease of blueberries especially when grown in areas with poor drainage. Re...

  16. Mapping Fusarium solani and Aphanomyces euteiches root rot resistance and root architecture quantitative trait loci in common bean (Phaseolus vulgaris)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Root rot diseases of bean (Phaseolus vulgaris L.) are a constraint to dry and snap bean production. We developed the RR138 RIL mapping population from the cross of OSU5446, a susceptible line that meets current snap bean processing industry standards, and RR6950, a root rot resistant dry bean in th...

  17. Interactions between cranberries and fungi: the proposed function of organic acids in virulence suppression of fruit rot fungi

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cranberry fruit are a rich source of bioactive compounds that may function as constitutive or inducible barriers against rot-inducing fungi. The content and composition of these compounds change as the season progresses. Several necrotrophic fungi cause cranberry fruit rot disease complex. These fun...

  18. Desorption of TEDA from impregnated charcoals

    SciTech Connect

    Wood, G.

    1980-01-01

    Triethylenediamine (TEDA) is one of the most effective charcoal impregnants for trapping organic forms of radioiodine from air. It is used in air cleaning adsorbers, air samplers, and air purifying respirator canisters and cartridges for airborne radioiodine. Volatility of the pure crystals suggested the possibility of significant TEDA desorption in these applications, resulting in toxic levels of amine and/or degradation of sorbent efficiency. Measurements of TEDA desorption rates were made for four commercial charcoals. Temperatures of 70 to 120/sup 0/C were used to give levels detectable with a photoionization detector. Extrapolations to temperatures nearer normal ambient were made by using Clapeyron equation plots. Among three charcoals with the same 5% level of TEDA impregnation, desorption rates varied over factors as great as 10. Slopes of Clapeyron plots were similar, giving an average 25 kcal/mol heat of desorption. This corresponds to a doubling of the TEDA desorption rate with each 5/sup 0/C (9/sup 0/F) rise in temperature. Desorption rates were directly proportional to airflow rates or velocities through the test beds and independent of humidity. Desorption rates per unit weight of charcoal decreased exponentially with bed depth, presumably due to TEDA readsorption. Calculations based on this data and the geometry of a standard adsorber cell showed that at normal ambient temperatures: (1) concentrations of TEDA in effluent air are well below expected toxic levels; and (2) losses of TEDA may be significant. At elevated temperatures TEDA desorption rates are high enough to affect methyl iodide trapping efficiencies and, possibly, charcoal ignition temperatures.

  19. Fire-derived charcoal causes loss of forest humus.

    PubMed

    Wardle, David A; Nilsson, Marie-Charlotte; Zackrisson, Olle

    2008-05-01

    Fire is a global driver of carbon storage and converts a substantial proportion of plant biomass to black carbon (for example, charcoal), which remains in the soil for thousands of years. Black carbon is therefore often proposed as an important long-term sink of soil carbon. We ran a 10-year experiment in each of three boreal forest stands to show that fire-derived charcoal promotes loss of forest humus and that this is associated with enhancement of microbial activity by charcoal. This result shows that charcoal-induced losses of belowground carbon in forests can partially offset the benefits of charcoal as a long-term carbon sink.

  20. Effect of Environment and Sugar Beet Genotype on Root Rot Development and Pathogen Profile During Storage.

    PubMed

    Liebe, Sebastian; Varrelmann, Mark

    2016-01-01

    Storage rots represent an economically important factor impairing the storability of sugar beet by increasing sucrose losses and invert sugar content. Understanding the development of disease management strategies, knowledge about major storage pathogens, and factors influencing their occurrence is crucial. In comprehensive storage trials conducted under controlled conditions, the effects of environment and genotype on rot development and associated quality changes were investigated. Prevalent species involved in rot development were identified by a newly developed microarray. The strongest effect on rot development was assigned to environment factors followed by genotypic effects. Despite large variation in rot severity (sample range 0 to 84%), the spectrum of microorganisms colonizing sugar beet remained fairly constant across all treatments with dominant species belonging to the fungal genera Botrytis, Fusarium, and Penicillium. The intensity of microbial tissue necrotization was strongly correlated with sucrose losses (R² = 0.79 to 0.91) and invert sugar accumulation (R² = 0.91 to 0.95). A storage rot resistance bioassay was developed that could successfully reproduce the genotype ranking observed in storage trials. Quantification of fungal biomass indicates that genetic resistance is based on a quantitative mechanism. Further work is required to understand the large environmental influence on rot development in sugar beet.

  1. Botanicals to control soft rot bacteria of potato.

    PubMed

    Rahman, M M; Khan, A A; Ali, M E; Mian, I H; Akanda, A M; Abd Hamid, S B

    2012-01-01

    Extracts from eleven different plant species such as jute (Corchorus capsularis L.), cheerota (Swertia chiraita Ham.), chatim (Alstonia scholaris L.), mander (Erythrina variegata), bael (Aegle marmelos L.), marigold (Tagetes erecta), onion (Allium cepa), garlic (Allium sativum L.), neem (Azadiracta indica), lime (Citrus aurantifolia), and turmeric (Curcuma longa L.) were tested for antibacterial activity against potato soft rot bacteria, E. carotovora subsp. carotovora (Ecc) P-138, under in vitro and storage conditions. Previously, Ecc P-138 was identified as the most aggressive soft rot bacterium in Bangladeshi potatoes. Of the 11 different plant extracts, only extracts from dried jute leaves and cheerota significantly inhibited growth of Ecc P-138 in vitro. Finally, both plant extracts were tested to control the soft rot disease of potato tuber under storage conditions. In a 22-week storage condition, the treated potatoes were significantly more protected against the soft rot infection than those of untreated samples in terms of infection rate and weight loss. The jute leaf extracts showed more pronounced inhibitory effects on Ecc-138 growth both in in vitro and storage experiments. PMID:22701096

  2. Emissions of air toxics from the production of charcoal in a simulated Missouri charcoal kiln

    SciTech Connect

    Lemieux, P.M.; Kariher, P.H.; Fairless, B.J.; Tapp, J.A.

    1998-11-01

    The paper gives results of experiments in a laboratory-scale charcoal kiln simulator to evaluate emissions of hazardous air pollutant from the production of charcoal in Missouri-type kilns. Fixed combustion gases were measured using continuous monitors. In addition, other pollutants, including methanol, volatile organic compounds, semivolatile organic compounds, and particle emission rates and size distributions were measured using various techniques. Emissions of all pollutants are reported in grams emitted per unit mass of initial wood converted to charcoal. Two burn conditions--slow and fast burn--were examined. High levels of methanol, benzene, and fine particulate were emitted from all tests. The estimated emissions from the fast burn conditions were significantly higher than those from the slow burn conditions.

  3. Charcoal deposition and redeposition in Elk Lake, Minnesota, USA

    USGS Publications Warehouse

    Platt, Bradbury J.

    1996-01-01

    Sedimentary charcoal, diatom and phytolith records of the past 1500 years at Elk Lake, Minnesota, in combination with sediment trap studies and a transect of surface sediment samples, document the mechanisms by which previously deposited charcoal is redeposited and finally buried in this lake. The frequent correspondence of high diatom concentrations and peaks of phytolith and charcoal fragments suggest that currents and turbulence related to lake circulation are responsible for winnowing charcoal and phytoliths from shallow water depositional sites to deeper areas of the lake. High diatom concentrations in the record relate to increased nutrient fluxes also supplied by circulation. Despite the fact that the watershed and area around Elk Lake has not been burned since AD 1922, charcoal continues to reach the profundal zone from littoral source areas in Elk Lake. The variable redeposition of within-lake charcoal requires evaluation before fire-history records can be related to global, regional or even local fire events.

  4. Charcoal in the soil and the Earth System

    NASA Astrophysics Data System (ADS)

    Scott, A. C.

    2012-04-01

    Charcoal occurs in the natural environment as either a result of wildfire or volcanic processes. Charcoal is one of a range of pyrolysis products that may be included in the term black carbon. This paper outlines aspects of charcoal formation (both natural and experimental) and briefly considers the taphonomic processes leading to a final assemblage. This is done using examples from recent fires and through experimentation. In particular, it is shown that the temperature of charcoal formation may influence the rate of subsequent decay. This has significance for biochar studies. While charcoal may remain near the place of it's formation and be buried in soils it still may be affected by physical and chemical changes that result in fragmentation and subsequent loss to the soil. Charcoal may also be washed out of the fire site by overland flow particularly if the rain occurs soon after the fire. Charcoal is abundant in many sedimentary rocks deposited in a wide range of environments, from terrestrial to marine. Charcoal has a long fossil record and is found in rock sequences from the late Silurian onwards. Charcoal provides evidence of the deep time history of wildfire. There is an intimate relationship between the history of oxygen in the atmosphere and periods of extensive wildfires. High atmospheric oxygen levels (around 30%) in the late Palaeozoic and Cretaceous had a profound effect on the Earth System. The use of charcoal for plant evolution studies, fire history studies, vegetation studies, anatomical studies, climate and atmospheric studies and the wider importance of charcoal for the Earth and Biological Sciences will be considered (Scott 2010, Glasspool and Scott in press). Charcoal is information-rich but yet is an under-utilized resource.

  5. An integrated control of Pythium root rot of greenhouse tomato.

    PubMed

    Tu, J C

    2002-01-01

    Pythium root rot caused by Pythium aphanidermatum is one of the most important diseases of greenhouse tomatoes. Hydroponic culture exacerbates the problem. Both nutrient film technique (NFT) and recirculating growing systems pose a challenge in the control of this disease, because the pathogen, especially the zoospores, can spread easily in the recirculating solution to the whole growing system. Fortunately, hydroponically grown plants are easier to manipulate than soil grown plants, proper manipulation of root environments can lead to excellent disease control. This paper reports the development of an effective integrated control measure for pythium root rot of tomato by integrating pH, bioagent, and ultra-violet irradiation in a specific manner. This integrated control consists of three operations: a) before transplanting, the UV system is connected to sterilize the recirculating solution using 100 mJcm-2; b) after transplanting, the nutrient solution is delivered at pH 5.0 regime for five weeks followed by adjusting pH to 5.8 to 6.2 regime for one week; and c) bacterial bioagent, such as Pseudomonas is introduced into the root zone at 100 mL per plant at 10(8) bacteria mL-1 or added to the nutrient solution to arrive at 10(6) bacteria mL-1 in the solution. This report also discusses the advantages and limitations of this measure in the control of pythium root rot. PMID:12701425

  6. Change detection of cotton root rot infection over a 10-year interval using airborne multispectral imagery

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot is a very serious and destructive disease of cotton grown in the southwestern and south central United States. Accurate information regarding the spatial and temporal infections of the disease within fields is important for effective management and control of the disease. The objecti...

  7. A postharvest fruit rot of apple caused by Lambertella sp. in Washington state

    Technology Transfer Automated Retrieval System (TEKTRAN)

    During surveys for postharvest diseases of apples in 2003-05, a fruit rot disease was observed on stored apples collected from packinghouses. The disease appeared to originate from infections of wounds on the fruit, and lesions were brown and decayed tissues were spongy. Lambertella sp. was consiste...

  8. Pythium and Fusarium species causing seed rot and damping-off of alfalfa

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Seed rot and damping-off is an important disease of alfalfa, severely affecting stand establishment when conditions favor the disease. This disease may have been overlooked as a cause of poor stand establishment and reduced vigor of adult plants. Globally, 15 Pythium species have been found to cause...

  9. paleofire: An R package to analyse sedimentary charcoal records from the Global Charcoal Database to reconstruct past biomass burning

    NASA Astrophysics Data System (ADS)

    Blarquez, Olivier; Vannière, Boris; Marlon, Jennifer R.; Daniau, Anne-Laure; Power, Mitchell J.; Brewer, Simon; Bartlein, Patrick J.

    2014-11-01

    We describe a new R package, paleofire, for analysis and synthesis of charcoal time series, such as those contained in the Global Charcoal Database (GCD), that are used to reconstruct paleofire activity (past biomass burning). paleofire is an initiative of the Global Paleofire Working Group core team (www.gpwg.org), whose aim is to encourage the use of sedimentary charcoal series to develop regional-to-global syntheses of paleofire activity, and to enhance access to the GCD data by providing a common research framework. Currently, paleofire features are organized into three different parts related to (i) site selection and charcoal series extraction from the GCD; (ii) charcoal data transformation; and (iii) charcoal series compositing and synthesis. We provide a technical description of paleofire and describe some new implementations such as the circular block bootstrap procedure. We tested the software using GCDv3 data from eastern North America, and provide examples of interpreting results of regional and global syntheses.

  10. Influences of charcoal and bamboo charcoal amendment on soil-fluoride fractions and bioaccumulation of fluoride in tea plants.

    PubMed

    Gao, Hongjian; Zhang, Zhengzhu; Wan, Xiaochun

    2012-10-01

    High levels of fluoride in tea plants pose a potential health risk to humans who drink tea. It has been demonstrated that tea plant fluoride is closely related to the available fluoride in soil. But approaches that could be used to regulate the availability of fluoride in soil have been rarely seen. This study aims to investigate how the addition of charcoal and bamboo charcoal affected soil fluoride availability and bioaccumulation of fluoride in tea plants. In a microcosm experiment, tea plants were grown in the tea garden soil mixed with different amounts of charcoal and bamboo charcoal [that is, 0.5, 1.0, 2.5, and 5.0 % (w/w)]. Soil-fluoride fractions and fluoride accumulated in tea plants were determined using the sequential extraction and ion selective electrode method. Obtained results showed that both charcoal and bamboo charcoal additions significantly enhanced the concentrations of Fe/Mn oxide-bound fluoride, but significantly reduced the concentrations of water-soluble and exchangeable fluoride (p < 0.05) in soil. Charcoal and bamboo charcoal additions also significantly decreased the amounts of fluoride in tea roots and tea leaves (p < 0.05). However, the additions of charcoal and bamboo charcoal had no impacts on the tea quality, as indexed by the concentrations of polysaccharides, polyphenols, amino acids, and caffeine in tea leaves. These results suggested that application of charcoal and bamboo charcoal may provide a useful method to reduce the availability of fluoride in soil and the subsequent fluoride uptake by tea plants.

  11. Charcoal as an alternative energy source. sub-project: briquetting of charcoal

    SciTech Connect

    Enstad, G.G.

    1982-02-02

    Charcoal briquettes have been studied both theoretically and experimentally. It appears most realistic to use binders in solution. Binders of this kind have been examined and the briquettes' mechanical properties measured. Most promising are borresperse, gum arabic, dynolex, and wood tar.

  12. Grapevine bunch rots: impacts on wine composition, quality, and potential procedures for the removal of wine faults.

    PubMed

    Steel, Christopher C; Blackman, John W; Schmidtke, Leigh M

    2013-06-01

    Bunch rot of grape berries causes economic loss to grape and wine production worldwide. The organisms responsible are largely filamentous fungi, the most common of these being Botrytis cinerea (gray mold); however, there are a range of other fungi responsible for the rotting of grapes such as Aspergillus spp., Penicillium spp., and fungi found in subtropical climates (e.g., Colletotrichum spp. (ripe rot) and Greeneria uvicola (bitter rot)). A further group more commonly associated with diseases of the vegetative tissues of the vine can also infect grape berries (e.g., Botryosphaeriaceae, Phomopsis viticola ). The impact these fungi have on wine quality is poorly understood as are remedial practices in the winery to minimize wine faults. Compounds found in bunch rot affected grapes and wine are typically described as having mushroom, earthy odors and include geosmin, 2-methylisoborneol, 1-octen-3-ol, 2-octen-1-ol, fenchol, and fenchone. This review examines the current state of knowledge about bunch rot of grapes and how this plant disease complex affects wine chemistry. Current wine industry practices to minimize wine faults and gaps in our understanding of how grape bunch rot diseases affect wine production and quality are also identified.

  13. Two genes conferring resistance to Pythium stalk rot in maize inbred line Qi319.

    PubMed

    Song, Feng-Jing; Xiao, Ming-Gang; Duan, Can-Xing; Li, Hong-Jie; Zhu, Zhen-Dong; Liu, Bao-Tao; Sun, Su-Li; Wu, Xiao-Fei; Wang, Xiao-Ming

    2015-08-01

    Stalk rots are destructive diseases in maize around the world, and are most often caused by the pathogen Pythium, Fusarium and other fungi. The most efficient management for controlling stalk rots is to breed resistant cultivars. Pythium stalk rot can cause serious yield loss on maize, and to find the resistance genes from the existing germplasm is the basis to develop Pythium-resistance hybrid lines. In this study, we investigated the genetic resistance to Pythium stalk rot in inbred line Qi319 using F2 and F2:3 population, and found that the resistance to Pythium inflatum in Qi319 was conferred by two independently inherited dominant genes, RpiQI319-1 and RpiQI319-2. Linkage analysis uncovered that the RpiQI319-1 co-segregated with markers bnlg1203, and bnlg2057 on chromosome 1, and that the RpiQI319-2 locus co-segregated with markers umc2069 and bnlg1716 on chromosome 10. The RpiQI319-1 locus was further mapped into a ~500-kb interval flanked by markers SSRZ33 and SSRZ47. These results will facilitate marker-assisted selection of Pythium stalk rot-resistant cultivars in maize breeding. To our knowledge, this is the first report on the resistance to P. inflatum in the inbred line Qi319, and is also the first description of two independently inherited dominant genes conferring the resistance of Pythium stalk rot in maize. PMID:25724693

  14. Two genes conferring resistance to Pythium stalk rot in maize inbred line Qi319.

    PubMed

    Song, Feng-Jing; Xiao, Ming-Gang; Duan, Can-Xing; Li, Hong-Jie; Zhu, Zhen-Dong; Liu, Bao-Tao; Sun, Su-Li; Wu, Xiao-Fei; Wang, Xiao-Ming

    2015-08-01

    Stalk rots are destructive diseases in maize around the world, and are most often caused by the pathogen Pythium, Fusarium and other fungi. The most efficient management for controlling stalk rots is to breed resistant cultivars. Pythium stalk rot can cause serious yield loss on maize, and to find the resistance genes from the existing germplasm is the basis to develop Pythium-resistance hybrid lines. In this study, we investigated the genetic resistance to Pythium stalk rot in inbred line Qi319 using F2 and F2:3 population, and found that the resistance to Pythium inflatum in Qi319 was conferred by two independently inherited dominant genes, RpiQI319-1 and RpiQI319-2. Linkage analysis uncovered that the RpiQI319-1 co-segregated with markers bnlg1203, and bnlg2057 on chromosome 1, and that the RpiQI319-2 locus co-segregated with markers umc2069 and bnlg1716 on chromosome 10. The RpiQI319-1 locus was further mapped into a ~500-kb interval flanked by markers SSRZ33 and SSRZ47. These results will facilitate marker-assisted selection of Pythium stalk rot-resistant cultivars in maize breeding. To our knowledge, this is the first report on the resistance to P. inflatum in the inbred line Qi319, and is also the first description of two independently inherited dominant genes conferring the resistance of Pythium stalk rot in maize.

  15. Identification of Vibrio harveyi as a causative bacterium for a tail rot disease of sea bream Sparus aurata from research hatchery in Malta.

    PubMed

    Haldar, S; Maharajan, A; Chatterjee, S; Hunter, S A; Chowdhury, N; Hinenoya, A; Asakura, M; Yamasaki, S

    2010-10-20

    A bacterial disease was reported from gilthead sea bream (Sparus aurata) within a hatchery environment in Malta. Symptoms included complete erosion of tail, infection in the eye, mucous secretion and frequent mortality. A total of 540 strains were initially isolated in marine agar from different infected body parts and culture water sources. Subsequently 100 isolates were randomly selected, identified biochemically and all were found to be Vibrio harveyi-related organisms; finally from 100 isolates a total of 13 numbers were randomly selected and accurately identified as V. harveyi by 16S rRNA gene sequencing and species-specific PCR. Ribotyping of these strains with HindIII revealed total of six clusters. In vivo challenge study with representative isolates from each cluster proved two clusters each were highly pathogenic, moderately pathogenic and non-pathogenic. All 13 isolates were positive for hemolysin gene, a potential virulence factor. Further analysis revealed probably a single copy of this gene was encoded in all isolates, although not in the same locus in the genome. Although V. harveyi was reported to be an important pathogen for many aquatic organisms, to our knowledge this might be the first report of disease caused by V. harveyi and their systematic study in the sea bream hatchery from Malta.

  16. Screening of Rhizobacteria for Their Plant Growth Promotion Ability and Antagonism Against Damping off and Root Rot Diseases of Broad Bean (Vicia faba L.).

    PubMed

    Indira Devi, S; Talukdar, N C; Chandradev Sharma, K; Jeyaram, K; Rohinikumar, M

    2011-01-01

    Development of microbial inoculants from rhizobacterial isolates with potential for plant growth promotion and root disease suppression require rigorous screening. Fifty-four (54) fluorescent pseudomonads, out of a large collection of rhizobacteria from broad bean fields of 20 different locations within Imphal valley of Manipur, were initially screened for antifungal activity against Macrophomina phaseolina and Rhizoctonia solani, of diseased roots of broad bean and also three other reference fungal pathogens of plant roots. Fifteen fluorescent pseudomonas isolates produced inhibition zone (8-29 mm) of the fungal growth in dual plate assay and IAA like substances (24.1-66.7 μg/ml) and soluble P (12.7-56.80 μg/ml) in broth culture. Among the isolates, RFP 36 caused a marked increase in seed germination, seedling biomass and control of the root borne pathogens of broad bean. PCR-RAPD analysis of these isolates along with five MTCC reference fluorescent pseudomonas strains indicated that the RFP-36 belonged to a distinct cluster and the PCR of its genomic DNA with antibiotic specific primers Phenazine-1-carboxylic acid and 2, 4-diacetyl phloroglucinol suggested possible occurrence of gene for the potent antibiotics. Overall, the result of the study indicated the potential of the isolate RFP 36 as a microbial inoculant with multiple functions for broad bean.

  17. [Adsorption mechanism of furfural onto modified rice husk charcoals].

    PubMed

    Deng, Yong; Wang, Xianhua; Li, Yunchao; Shao, Jing'ai; Yang, Haiping; Chen, Hanping

    2015-10-01

    To evaluate the absorptive characteristics of furfural onto biomass charcoals derived from rice husk pyrolysis, we studied the information of the structure and surface chemistry properties of the rice husk charcoals modified by thermal treatment under nitrogen and carbon dioxide flow and adsorption mechanism of furfural. The modified samples are labeled as RH-N2 and RH-CO2. Fresh rice husk charcoal sample (RH-450) and modified samples were characterized by elemental analysis, nitrogen adsorption-desorption isotherms, Fourier-transform infrared spectroscopy and Boehm titration. The results show that fresh rice husk charcoal obtained at 450 degrees C had a large number of organic groups on its surface and poor pore structure. After the modification under nitrogen and carbon dioxide flow, oxygenic organics in rice husk charcoals decompose further, leading to the reduction of acidic functional groups on charcoals surface, and the increase of the pyrone structures of the basic groups. Meanwhile, pore structure was improved significantly and the surface area was increased, especially for the micropores. This resulted in the increase of π-π dispersion between the surfaces of rice husk charcoals and furfural molecular. With making comprehensive consideration of π-π dispersion and pore structure, the best removal efficiency of furfural was obtained by rice husk charcoal modified under carbon dioxide flow.

  18. Characterization of charcoals for helium cryopumping in fusion devices

    SciTech Connect

    Sedgley, D.W.; Tobin, A.G.; Batzer, T.H.; Call, W.R.

    1987-07-01

    The capability of charcoal as a sorbent for helium at cryogenic temperatures depends upon charcoal characteristics that are not well understood. Previous work by the authors has indicated that the charcoals' pumping capability for helium depends as much on their source as on their particle size distributions. To develop a correlation between the physical characteristics of charcoal and helium pumping performance, different charcoals based on wood, coal, coconut, and a petroleum by-product were obtained from commercial sources. They were bonded to an aluminum substrate, and cooled to liquid-helium temperatures in a vacuum chamber. The helium pumping speed at constant throughput versus quantity of helium absorbed was measured for each charcoal grade. Porosimetry measurements on each charcoal grade using nitrogen as the sorbent gas were made that included total surface area, adsorption and desorption isotherms, and pore area and pore volume distributions. Significant differences in helium pumping performance and in pore size distribution were observed. Comparisons are made between helium pumping performance and charcoal characteristics and a possible correlation is identified.

  19. Metal content of charcoal in mining-impacted wetland sediments.

    PubMed

    Baker, Leslie L; Strawn, Daniel G; Rember, William C; Sprenke, Kenneth F

    2011-01-01

    Charcoal is well known to accumulate contaminants, but its association with metals and other toxic elements in natural settings has not been well studied. Association of contaminants with charcoal in soil and sediment may affect their mobility, bioavailability, and fate in the environment. In this paper, natural wildfire charcoal samples collected from a wetland site that has been heavily contaminated by mine waste were analyzed for elemental contents and compared to the surrounding soil. Results showed that the charcoal particles were enriched over the host soils by factors of two to 40 times in all contaminant elements analyzed. Principal component analysis was carried out on the data to determine whether element enrichment patterns in the soil profile charcoal are related to those in the soils. The results suggest that manganese and zinc concentrations in charcoal are controlled by geochemical processes in the surrounding soil, whereas the concentrations of arsenic, lead, zinc, iron, phosphorus, and sulfur in charcoal are unrelated to those in the surrounding soil. This study shows evidence that charcoal in soils can have a distinct and important role in controlling contaminant speciation and fate in the environment.

  20. EMISSIONS OF AIR TOXICS FROM A SIMULATED CHARCOAL KILN

    EPA Science Inventory

    The report gives results of experiments in a laboratory-scale charcoal kiln simulator to evaluate emissions of hazardous air pollutants from the production of charcoal in Missouri-type kilns. Fixed combustion gases were measured using continuous monitors. In Addition, other pollu...

  1. Characterization of charcoals for helium cryopumping in fusion devices

    NASA Astrophysics Data System (ADS)

    Sedgley, D. W.; Tobin, A. G.; Batzer, T. H.; Call, W. R.

    1987-07-01

    The capability of charcoal as a sorbent for helium at cryogenic temperatures depends upon charcoal characteristics that are not well understood. Previous work by the authors has indicated that the charcoals- pumping capability for helium depends as much on their source as on their particle size distributions. To develop a correlation between the physical characteristics of charcoal and helium pumping performance, different charcoals based on wood, coal, coconut, and a petroleum by-product were obtained from commercial sources. They were bonded to an aluminum substrate, and cooled to liquid-helium temperatures in a vacuum chamber. The helium pumping speed at constant throughput versus quantity of helium absorbed was measured for each charcoal grade. Porosimetry measurements on each charcoal grade using nitrogen as the sorbent gas were made that included total surface area, adsorption and desorption isotherms, and pore area and pore volume distributions. Significant differences in helium pumping performance and in pore size distribution were observed. Comparisons are made between helium pumping performance and charcoal characteristics and a possible correlation is identified.

  2. [Adsorption mechanism of furfural onto modified rice husk charcoals].

    PubMed

    Deng, Yong; Wang, Xianhua; Li, Yunchao; Shao, Jing'ai; Yang, Haiping; Chen, Hanping

    2015-10-01

    To evaluate the absorptive characteristics of furfural onto biomass charcoals derived from rice husk pyrolysis, we studied the information of the structure and surface chemistry properties of the rice husk charcoals modified by thermal treatment under nitrogen and carbon dioxide flow and adsorption mechanism of furfural. The modified samples are labeled as RH-N2 and RH-CO2. Fresh rice husk charcoal sample (RH-450) and modified samples were characterized by elemental analysis, nitrogen adsorption-desorption isotherms, Fourier-transform infrared spectroscopy and Boehm titration. The results show that fresh rice husk charcoal obtained at 450 degrees C had a large number of organic groups on its surface and poor pore structure. After the modification under nitrogen and carbon dioxide flow, oxygenic organics in rice husk charcoals decompose further, leading to the reduction of acidic functional groups on charcoals surface, and the increase of the pyrone structures of the basic groups. Meanwhile, pore structure was improved significantly and the surface area was increased, especially for the micropores. This resulted in the increase of π-π dispersion between the surfaces of rice husk charcoals and furfural molecular. With making comprehensive consideration of π-π dispersion and pore structure, the best removal efficiency of furfural was obtained by rice husk charcoal modified under carbon dioxide flow. PMID:26964338

  3. Effects of mesophilic and thermophilic composts on suppression of Fusarium root and stem rot of greenhouse cucumber.

    PubMed

    Kannangara, T; Utkhede, R S; Paul, J W; Punja, Z K

    2000-11-01

    Three composts were tested for their ability to suppress root and stem rot caused by the soil borne fungal pathogen Fusarium oxysporum f. sp. radicis-cucumerinum (FORC) on cucumber. Two of the composts were prepared from separated dairy solids either by windrow (WDS) or vermicomposting (VMC) while the third, obtained from International Bio-Recovery (IBR), was prepared from vegetable refuse using aerobic digestion. Three sets of potting mixes were prepared by mixing the composts with sawdust at varying ratios, and seeded with cucumber cv. Corona. After 14 days of growth in the greenhouse, inoculum of FORC (20 mL of 5 x 10(6) micro-conidia per mL) was applied to each pot at three different times (14, 21, and 35 days). In unamended inoculated pots, the pathogen caused stunted growth and reduced flowers. Amendment of WDS in the potting mix suppressed these symptoms, while VMC and IBR had no effect. All three composts reduced the FORC colony forming units (cfu) at the end of the experiment (10 weeks). There was a large increase of fluorescent bacteria near the vicinity of roots particularly in WDS amended potting mixes. When water extracts of the composts were plated onto acidified potato dextrose agar (APDA), only IBR contained a potent thermostable inhibitor to FORC. This inhibitor was removed by activated charcoal but was not partitioned into petroleum ether at acid, basic, or neutral pH. Inhibition of FORC by IBR was not due to electrical conductivity or trace elements in the compost. Contrasting effectiveness of the WDS and VMC made from the same waste suggests that composting method can influence the disease suppression properties of the finished compost. PMID:11109490

  4. Effects of historic charcoal burning on soil properties

    NASA Astrophysics Data System (ADS)

    Hirsch, Florian; Schneider, Anna; Raab, Alexandra; Raab, Thomas; Buras, Allan; van der Maaten, Ernst; Takla, Melanie; Räbiger, Christin; Cruz Garcia, Roberto; Wilmking, Martin

    2015-04-01

    In Northeastern Germany the production of ironware between the 16th and 19th century left behind a remarkable amount of charcoal kiln remains. At the study site in the forests north of Cottbus, Rubic Brunic Arenosols are developed on Weichselian glaciofluvial deposits. Remote sensing surveys, underpinned by archaeological studies, show that charcoal was gained from several thousand kilns. The round charcoal kiln remains with inner diameters up to 20 m are smooth platforms elevated a few decimeters higher than the surrounding area. The remaining mounds consist of an about 40 cm thick sheet containing residuals of the charcoal production process such as charcoal fragments, ash but also organic material covering the Rubic Brunic Arenosols. The charcoal kiln remains are distanced only up to 100 m from each other. For the 32 square kilometers large study site, the ground area covered by such charcoal production residuals is about 0.5 square kilometer, i.e. 1.5% of the study area. The charcoal kiln sites are a remarkable carbon accumulator on the sandy parent material. Against this background, we aim to characterize the effects of pyrolysis and the enrichment of carbon, induced by the charcoal production, on soil properties. Field work was done during archaeological rescue excavations on three charcoal kiln relicts having diameters of about 15 m. We applied 150 l of Brilliant Blue solution on six 1 square meter plots (three inside, three outside of the charcoal kiln mound) and afterwards trenched horizontal and vertical profiles for recording the staining patterns. Undisturbed soil samples to study soil micromorphology and further undisturbed samples for characterizing soil physical and hydraulic properties were taken. Outside of the charcoal kiln remain the Brilliant Blue solution drained within less than 10 minutes, whereas on the charcoal kiln remains the draining took between 20 and 40 minutes. Preliminary laboratory analyses underline the findings from the field and

  5. Genetic studies on collar rot resistance in opium poppy (Papaver somniferum L.).

    PubMed

    Trivedi, Mala; Dhawan, Om Prakash; Tiwari, Rajesh Kumar; Sattar, Abdul

    2005-01-01

    The collar rot disease has been reported recently and occurs at the 10-12-leaf stage of plants of opium poppy. Infected plants topple down and dry prematurely due to fast rotting at the collar region. The inoculum for this study was multiplied on the cornmeal-sand culture. Genetic ratios were calculated by the chi-square test. Inheritance studies on this disease show a monogenic pattern of segregation with the ratio of 3 : 1 at F2, 1 : 2 : 1 at F3 and 1 : 1 at the backcross. Such genetic ratios clearly indicate that a single recessive gene (rs-1) is responsible for disease resistance in opium poppy. The inference drawn on the basis of the present study will be a great help in the future breeding programme of opium poppy for collar rot resistance.

  6. Charcoal bed operation for optimal organic carbon removal

    SciTech Connect

    Merritt, C.M.; Scala, F.R.

    1995-05-01

    Historically, evaporation, reverse osmosis or charcoal-demineralizer systems have been used to remove impurities in liquid radwaste processing systems. At Nine Mile point, we recently replaced our evaporators with charcoal-demineralizer systems to purify floor drain water. A comparison of the evaporator to the charcoal-demineralizer system has shown that the charcoal-demineralizer system is more effective in organic carbon removal. We also show the performance data of the Granulated Activated Charcoal (GAC) vessel as a mechanical filter. Actual data showing that frequent backflushing and controlled flow rates through the GAC vessel dramatically increases Total Organic Carbon (TOC) removal efficiency. GAC vessel dramatically increases Total Organic Carbon (TOC) removal efficiency. Recommendations are provided for operating the GAC vessel to ensure optimal performance.

  7. Fusion reactor high vacuum pumping: Charcoal cryosorber tritium exposure results

    SciTech Connect

    Sedgley, D.W.; Walthers, C.R.; Jenkins, E.M. )

    1991-01-01

    Recent experiments, have shown the practically of using activated charcoal (coconut charcoal) at 4{degrees}K to pump helium and hydrogen isotopes for a fusion reactor. Both speed and capacity for deuterium/helium and tritium/helium-3 mixtures were shown to be satisfactory. The long term effects of tritium on the charcoal/cement system developed by Grumman and LLNL were not known and a program was undertaken to see what, if any, effect long term tritium exposure has on the cryosorber. Several charcoal on aluminum test samples were subjected to six months exposure of tritium at approximately 77{degrees}K. The tritium was scanned several times with a residual gas analyzer and the speed-capacity performance of the samples was measured before, approximately half way through and after the exposure. Modest effects were noted which would not seriously restrict charcoal's use as a cryosorber for fusion reactor high vacuum pumping applications. 4 refs., 8 figs.

  8. Massive theophylline overdose. Rapid elimination by charcoal hemoperfusion.

    PubMed

    Ehlers, S M; Zaske, D E; Sawchuk, R J

    1978-08-01

    Shock, seizures, cardiac arrhythmias, and respiratory and cardiac arrests developed in a patient who ingested 8.5 g of theophylline. Her condition improved and her serum theophylline concentration decreased from 170 to 20 mg/ml during six hours of charcoal hemoperfusion. Theophylline was removed from the serum by the uncoated charcoal column, as shown by an extraction efficiency approaching 100%. The maximum charcoal clearance of theophylline was 163 ml/kg/hr. The average endogenous theophylline clearance in adults is 50 ml/kg/hr and that achieved with hemodialysis is only 24.3 ml/kg/hr. Uncoated charcoal efficiently removes theophylline from the serum; charcoal hemoperfusion should be considered in severe theophylline toxic reactions.

  9. Influence of charcoal burning induced pyrolysis on soils

    NASA Astrophysics Data System (ADS)

    Hirsch, Florian; Nicolay, Alexander; Pötzsch, Bastian; Fritzsche, Marie; Raab, Alexandra; Raab, Thomas

    2014-05-01

    In Lusatia, Northeastern Germany, the production of ironware between the 16th and 19th century left behind a remarkable amount of charcoal kilns in the forests north of Cottbus. Remote sensing surveys, underpinned by archaeological studies, show that charcoal was gained around Cottbus from several thousand charcoal kilns which had internal diameters up to 20 m. For the study site with 35 km2 area, the until now prospected total ground area below the charcoal kilns which was potentially affected by the pyrolysis is about 0,5 km2. Historic data indicates that the pyrolysis in the charcoal kiln took up to several weeks, for the kilns with a diameter of 20 m about 20 days. To characterize the depth of thermal alteration of soils below the kiln our current focus is on the differentiation of the iron hydroxides by small-scale vertical analysis of soil profiles. The study site is situated 16 km northeast of Cottbus at the opencast mine Jänschwalde. Field work was done during the archaeological rescue excavation of a charcoal kiln in a 50 m long trench crossing an about 15 m wide charcoal kiln. One vertical profile outside the charcoal kiln and two vertical profiles below the charcoal kiln were chosen for analysis. The magnetic susceptibility was measured in situ on the undisturbed profile and ex situ on stepwise heated samples (105, 350, 550, 750 and 950°C). The total iron content was quantified ex situ by x-ray fluorescence. Our first results indicate a change in the magnetic susceptibility in the contact area of the mineral soil and the charcoal kiln. The influence of the pyrolysis on the soil is restricted to areas where the soil was not shielded against the heat by ash or organic material.

  10. Combining fuzzy set theory and nonlinear stretching enhancement for unsupervised classification of cotton root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot is a destructive disease affecting cotton production. Accurate identification of infected areas within fields is useful for cost-effective control of the disease. The uncertainties caused by various infection stages and newly infected plants make it difficult to achieve accurate clas...

  11. Evaluating spectral measures derived from airborne multispectral imagery for detecting cotton root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot, caused by the soilborne fungus Phymatotrichopsis omnivore, is one of the most destructive plant diseases occurring throughout the southwestern United States. This disease has plagued the cotton industry for more than 100 years, but effective practices for its control are still lacki...

  12. Site-specific Topguard application based on aerial imagery for effective management of cotton root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot is a century-old cotton disease that can be controlled with Topguard Fungicide recently. As this disease tends to occur in the same general areas within fields in recurring years, site-specific application of the fungicide only to the infected areas can be more effective and economic...

  13. First report of frosty pod rot caused by Moniliophthora roreri on cacao in Bolivia

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Frosty pod rot (FPR) is a devastating cacao disease caused by the basidiomycete Moniliophthora roreri (Aime and Phillips-Mora, 2005). The disease is confined to 13 countries in Central and South America and constitutes a permanent threat for cacao cultivation worldwide. In July 2012, FPR was detect...

  14. A postharvest fruit rot of apple caused by Lambertella corni-maris in Washington State

    Technology Transfer Automated Retrieval System (TEKTRAN)

    During surveys for postharvest diseases of apples conducted in Washington State from 2003 to 2005, an unknown fruit rot was observed on stored apples collected from commercial fruit packinghouses. This disease was present in 66 of the 179 grower lots sampled, accounting for an average 1 to 3% of the...

  15. Using mosaicked airborne imagery to assess cotton root rot infection on a regional basis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot is a serious and destructive disease in many of the cotton production areas in Texas. Since 2012, many cotton growers in Texas have used the Topguard fungicide to control this disease in their fields under Section 18 emergency exemptions. Airborne images have been used to monitor the...

  16. Evaluating unsupervised and supervised image classification methods for mapping cotton root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot, caused by the soilborne fungus Phymatotrichopsis omnivora, is one of the most destructive plant diseases occurring throughout the southwestern United States. This disease has plagued the cotton industry for over a century, but effective practices for its control are still lacking. R...

  17. Identifying new sources of resistance to Brown Stem Rot in Soybean

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Breeding for resistance to diseases and pests is an important objective to improve and protect soybean yields. In 2010, 14.4 percent of total soybean yield, valued at $5.59 billion, was suppressed by pathogenic diseases caused by fungi, microbes, and nematodes. Brown stem rot (BSR), caused by the fu...

  18. Loop-mediated isothermal amplification (LAMP) based detection of Colletotrichum falcatum causing red rot in sugarcane

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Red rot, caused by Colletotrichum falcatum, is a destructive disease prevalent in most sugarcane-producing countries. Disease-free sugarcane planting materials are essential as the pathogen spreads primarily through infected setts. The present study was undertaken to develop loop-mediated isothermal...

  19. Creating prescription maps from historical imagery for site-specific management of cotton root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot, caused by the soilborne fungus Phymatotrichopsis omnivore, is a severe plant disease that has affected cotton production for over a century. Recent research found that a commercial fungicide, Topguard (flutriafol), was able to control this disease. As a result, Topguard Terra Fungic...

  20. Report of postharvest rot of kiwifruit in Korea caused by Sclerotinia sclerotiorum.

    PubMed

    Lee, Jung Han; Kwon, Young Ho; Kwack, Yong-Bum; Kwak, Youn-Sig

    2015-08-01

    In May 2014, sclerotinia rot symptoms caused by Sclerotinia sclerotiorum were observed on stored kiwifruit in Jinju, South Korea. The symptoms appeared as soft, water-soaked lesions on fruit covered with a white mycelium. The morphological characteristics and the internal transcribed spacer sequences of rRNA of the pathogen isolated from the sclerotinia rot showed it to be S. sclerotiorum. This was confirmed by performing a pathogenicity test with pure cultures of S. sclerotiorum and by reisolating S. sclerotiorum from artificially inoculated kiwifruits. Our results should help promote a better understanding of the diseases that affect kiwifruit and improve practices for postharvest disease control in the kiwifruit industry.

  1. Production of charcoal and activated carbon at elevated pressure

    SciTech Connect

    Dai, Xiangfeng; Norberg, N.; Antal, M.J. Jr.

    1995-12-31

    With its wide range of properties, charcoal finds many commercial applications for domestic cooking, refining of metals (steel, copper, bronze, nickel, aluminum and electro-manganese), production of chemicals (carbon disulfide, calcium carbide, silicon carbide, sodium cyanide, carbon black, fireworks, gaseous chemicals, absorbents, soil conditioners and pharmaceuticals), as well as production of activated carbon and synthesis gas. In 1991, the world production of charcoal was 22.8 million cubic meters (3.8 million metric tons) as shown in Table 1. Brazil is the world`s largest charcoal producer --- 5.9 million cubic meters or one million metric tons was produced in 1991, most of which is used in steel and iron industry. African countries produced 45% of the world total amount of charcoal, where 86% of the wood-based energy is for domestic use, most of which is inefficiently used. Charcoal is produced commercially in kilns with a 25% to 30% yield by mass on a 7 to 12 day operating cycle. Until recently, the highest yield of good quality charcoal reported in the literature was 38%. In this paper, and ASME code rated experimental system is presented for producing charcoal and activated carbon from biomass.

  2. Tubular bamboo charcoal for anode in microbial fuel cells

    NASA Astrophysics Data System (ADS)

    Zhang, Jun; Li, Jun; Ye, Dingding; Zhu, Xun; Liao, Qiang; Zhang, Biao

    2014-12-01

    The anode material plays a significant role in determining the performance of microbial fuel cells (MFCs). In this study, the bamboo charcoal tube is proposed as a novel anode substrate by carbonizing the natural bamboo. Its surface functional groups, biocompatibility and internal resistance are thoroughly investigated. Performance of the MFCs with a conventional graphite tube anode and a bamboo charcoal tube anode is also compared. The results indicate that the tubular bamboo charcoal anode exhibits advantages over the graphite tube anode in terms of rougher surface, superior biocompatibility and smaller total internal resistance. Moreover, the X-ray photoelectron spectroscopy (XPS) analysis for the bamboo charcoal reveals that the introduced C-N bonds facilitate the electron transfer between the biofilm and electrodes. As a result, the MFC with a bamboo charcoal tube anode achieves a 50% improvement in the maximum power density over the graphite tube case. Furthermore, scale-up of the bamboo charcoal tube anode is demonstrated by employing a bundle of tubular bamboo charcoal to reach higher power output.

  3. Recovery of datable charcoal beneath young lavas: lessons from Hawaii.

    USGS Publications Warehouse

    Lockwood, J.P.; Lipman, P.W.

    1980-01-01

    Field studies in Hawaii aimed at providing a radiocarbon-based chronology of prehistoric eruptive activity have led to a good understanding of the processes that govern the formation and preservation of charcoal beneath basaltic lava flows. Charcoal formation is a rate-dependent process controlled primarily by temperature and duration of heating, as well as by moisture content, density, and size of original woody material. Charcoal will form wherever wood buried by lava is raised to sufficiently high temperatures, but owing to the availability of oxygen it is commonly burned to ash soon after formation. Wherever oxygen circulation is sufficiently restricted, charcoal will be preserved, but where atmospheric oxygen circulates freely, charcoal will only be preserved at a lower temperature, below that required for charcoal ignition or catalytic oxidation. These factors cause carbonized wood, especially that derived from living roots, to be commonly preserved beneath all parts of pahoehoe flows (where oxygen circulation is restricted), but only under margins of aa. Practical guidelines are given for the recovery of datable charcoal beneath pahoehoe and aa. Although based on Hawaiian basaltic flows, the guidelines should be applicable to other areas. -Authors

  4. Generation rate of carbon monoxide from burning charcoal.

    PubMed

    Ojima, Jun

    2011-01-01

    Charcoal, often used as cooking fuel at some restaurants, generates a significant amount of carbon monoxide (CO) during its combustion. Every year in Japan, a number of cooks and waiters/waitresses are poisoned by CO emanating from burning charcoal. Although certain ventilation is necessary to prevent the accumulation of CO, it is difficult to estimate the proper ventilation requirement for CO because the generation rate of CO from burning charcoal has not been established. In this study, several charcoals were evaluated in terms of CO generation rate. Sample charcoals were burned in a cooking stove to generate exhaust gas. For each sample, four independent variables -- the mass of the sample, the flow rate of the exhaust gas, CO concentration in the exhaust gas and the combustion time of the sample -- were measured, and the CO generation rate was calculated. The generation rate of CO from the charcoal was shown to be 137-185 ml/min/kW. Theoretical ventilation requirements for charcoals to prevent CO poisoning are estimated to be 41.2-55.6 m(3)/h/kW.

  5. Interactions between cranberries and fungi: the proposed function of organic acids in virulence suppression of fruit rot fungi.

    PubMed

    Tadych, Mariusz; Vorsa, Nicholi; Wang, Yifei; Bergen, Marshall S; Johnson-Cicalese, Jennifer; Polashock, James J; White, James F

    2015-01-01

    Cranberry fruit are a rich source of bioactive compounds that may function as constitutive or inducible barriers against rot-inducing fungi. The content and composition of these compounds change as the season progresses. Several necrotrophic fungi cause cranberry fruit rot disease complex. These fungi remain mostly asymptomatic until the fruit begins to mature in late August. Temporal fluctuations and quantitative differences in selected organic acid profiles between fruit of six cranberry genotypes during the growing season were observed. The concentration of benzoic acid in fruit increased while quinic acid decreased throughout fruit development. In general, more rot-resistant genotypes (RR) showed higher levels of benzoic acid early in fruit development and more gradual decline in quinic acid levels than that observed in the more rot-susceptible genotypes. We evaluated antifungal activities of selected cranberry constituents and found that most bioactive compounds either had no effects or stimulated growth or reactive oxygen species (ROS) secretion of four tested cranberry fruit rot fungi, while benzoic acid and quinic acid reduced growth and suppressed secretion of ROS by these fungi. We propose that variation in the levels of ROS suppressive compounds, such as benzoic and quinic acids, may influence virulence by the fruit rot fungi. Selection for crops that maintain high levels of virulence suppressive compounds could yield new disease resistant varieties. This could represent a new strategy for control of disease caused by necrotrophic pathogens that exhibit a latent or endophytic phase.

  6. Interactions between cranberries and fungi: the proposed function of organic acids in virulence suppression of fruit rot fungi

    PubMed Central

    Tadych, Mariusz; Vorsa, Nicholi; Wang, Yifei; Bergen, Marshall S.; Johnson-Cicalese, Jennifer; Polashock, James J.; White, James F.

    2015-01-01

    Cranberry fruit are a rich source of bioactive compounds that may function as constitutive or inducible barriers against rot-inducing fungi. The content and composition of these compounds change as the season progresses. Several necrotrophic fungi cause cranberry fruit rot disease complex. These fungi remain mostly asymptomatic until the fruit begins to mature in late August. Temporal fluctuations and quantitative differences in selected organic acid profiles between fruit of six cranberry genotypes during the growing season were observed. The concentration of benzoic acid in fruit increased while quinic acid decreased throughout fruit development. In general, more rot-resistant genotypes (RR) showed higher levels of benzoic acid early in fruit development and more gradual decline in quinic acid levels than that observed in the more rot-susceptible genotypes. We evaluated antifungal activities of selected cranberry constituents and found that most bioactive compounds either had no effects or stimulated growth or reactive oxygen species (ROS) secretion of four tested cranberry fruit rot fungi, while benzoic acid and quinic acid reduced growth and suppressed secretion of ROS by these fungi. We propose that variation in the levels of ROS suppressive compounds, such as benzoic and quinic acids, may influence virulence by the fruit rot fungi. Selection for crops that maintain high levels of virulence suppressive compounds could yield new disease resistant varieties. This could represent a new strategy for control of disease caused by necrotrophic pathogens that exhibit a latent or endophytic phase. PMID:26322038

  7. Interactions between cranberries and fungi: the proposed function of organic acids in virulence suppression of fruit rot fungi.

    PubMed

    Tadych, Mariusz; Vorsa, Nicholi; Wang, Yifei; Bergen, Marshall S; Johnson-Cicalese, Jennifer; Polashock, James J; White, James F

    2015-01-01

    Cranberry fruit are a rich source of bioactive compounds that may function as constitutive or inducible barriers against rot-inducing fungi. The content and composition of these compounds change as the season progresses. Several necrotrophic fungi cause cranberry fruit rot disease complex. These fungi remain mostly asymptomatic until the fruit begins to mature in late August. Temporal fluctuations and quantitative differences in selected organic acid profiles between fruit of six cranberry genotypes during the growing season were observed. The concentration of benzoic acid in fruit increased while quinic acid decreased throughout fruit development. In general, more rot-resistant genotypes (RR) showed higher levels of benzoic acid early in fruit development and more gradual decline in quinic acid levels than that observed in the more rot-susceptible genotypes. We evaluated antifungal activities of selected cranberry constituents and found that most bioactive compounds either had no effects or stimulated growth or reactive oxygen species (ROS) secretion of four tested cranberry fruit rot fungi, while benzoic acid and quinic acid reduced growth and suppressed secretion of ROS by these fungi. We propose that variation in the levels of ROS suppressive compounds, such as benzoic and quinic acids, may influence virulence by the fruit rot fungi. Selection for crops that maintain high levels of virulence suppressive compounds could yield new disease resistant varieties. This could represent a new strategy for control of disease caused by necrotrophic pathogens that exhibit a latent or endophytic phase. PMID:26322038

  8. Reduction of the polycyclic aromatic hydrocarbon (PAH) content of charcoal smoke during grilling by charcoal preparation using high carbonisation and a preheating step.

    PubMed

    Chaemsai, Suriyapong; Kunanopparat, Thiranan; Srichumpuang, Jidapa; Nopharatana, Montira; Tangduangdee, Chairath; Siriwattanayotin, Suwit

    2016-01-01

    Charcoal-grilling may lead to contamination of food with carcinogenic polycyclic aromatic hydrocarbons (PAHs) during the grilling process. The objective of this work was to determine the effect of charcoal preparation on 16 USEPA priority PAHs in the smoke produced during the grilling process. Firstly, mangrove charcoal was prepared at carbonisation temperatures of 500, 750 and 1000 °C. The charcoal were then preheated by burning at 650 °C. This preheating step is usually used to prepare hot charcoal for the grilling process in the food industry. In this study, charcoal was preheated at different burning times at 5, 20 min and 5 h, at which time partial and whole charcoal glowed, and charcoal was completely burnt, respectively. Finally, PAHs in the smoke were collected and determined by GC/MS. The result showed that charcoal prepared at a carbonisation temperature of 500 °C had higher levels of PAHs released into the smoke. In contrast, charcoal produced at 750 and 1000 °C had lower PAHs released for all burning times. In addition, PAHs released for 5, 20 min and 5 h of burning time were about 19.9, 1.2 and 0.7 µg g(-1) dry charcoal for charcoal produced at 500 °C, and about 0.9-1.4, 0.8-1.2 and 0.15-0.3 µg g(-1) dry charcoal for charcoal produced at 750 and 1000 °C, respectively. Therefore, this research suggests that food grilled using charcoal carbonised at a high temperature of about 750 °C presents a lower risk of PAH contamination. In addition, in the preheating step, whole charcoal should fully glow in order to reduce the PAH content in charcoal before grilling.

  9. Application of Genomic and Quantitative Genetic Tools to Identify Candidate Resistance Genes for Brown Rot Resistance in Peach

    PubMed Central

    Martínez-García, Pedro J.; Parfitt, Dan E.; Bostock, Richard M.; Fresnedo-Ramírez, Jonathan; Vazquez-Lobo, Alejandra; Ogundiwin, Ebenezer A.; Gradziel, Thomas M.; Crisosto, Carlos H.

    2013-01-01

    The availability of a complete peach genome assembly and three different peach genome sequences created by our group provide new opportunities for application of genomic data and can improve the power of the classical Quantitative Trait Loci (QTL) approaches to identify candidate genes for peach disease resistance. Brown rot caused by Monilinia spp., is the most important fungal disease of stone fruits worldwide. Improved levels of peach fruit rot resistance have been identified in some cultivars and advanced selections developed in the UC Davis and USDA breeding programs. Whole genome sequencing of the Pop-DF parents lead to discovery of high-quality SNP markers for QTL genome scanning in this experimental population. Pop-DF created by crossing a brown rot moderately resistant cultivar ‘Dr. Davis’ and a brown rot resistant introgression line, ‘F8,1–42’, derived from an initial almond × peach interspecific hybrid, was evaluated for brown rot resistance in fruit of harvest maturity over three seasons. Using the SNP linkage map of Pop-DF and phenotypic data collected with inoculated fruit, a genome scan for QTL identified several SNP markers associated with brown rot resistance. Two of these QTLs were placed on linkage group 1, covering a large (physical) region on chromosome 1. The genome scan for QTL and SNP effects predicted several candidate genes associated with disease resistance responses in other host-pathogen systems. Two potential candidate genes, ppa011763m and ppa026453m, may be the genes primarily responsible for M. fructicola recognition in peach, activating both PAMP-triggered immunity (PTI) and effector-triggered immunity (ETI) responses. Our results provide a foundation for further genetic dissection, marker assisted breeding for brown rot resistance, and development of peach cultivars resistant to brown rot. PMID:24244329

  10. Novel thermotolerant laccases produced by the white-rot fungus Physisporinus rivulosus.

    PubMed

    Hildén, Kristiina; Hakala, Terhi K; Maijala, Pekka; Lundell, Taina K; Hatakka, Annele

    2007-11-01

    The white-rot basidiomycete Physisporinus rivulosus strain T241i is highly selective for degradation of softwood lignin, which makes this fungus suitable for biopulping. In order to promote laccase production, P. rivulosus was cultivated in nutrient-nitrogen sufficient liquid media containing either charcoal or spruce sawdust as supplements. Two laccases with distinct pI values, Lac-3.5 and Lac-4.8, were purified from peptone-spruce sawdust-charcoal cultures of P. rivulosus. Both laccases showed thermal stability at up to 60 degrees C. Lac-4.8 was thermally activated at 50 degrees C. Surprisingly, both laccases displayed atypically low pH optima (pH 3.0-3.5) in oxidation of the commonly used laccase substrates syringaldazine (4-hydroxy-3,5-dimethoxybenzaldehyde azine), 2,6-dimethoxyphenol and guaiacol (2-methoxyphenol). Steady-state kinetic measurements pointed to unusually low affinity to guaiacol at low pH, whereas the kinetic constants for the methoxyphenols and ABTS were within the ranges reported for other fungal laccases. The combination of thermotolerance with low pH optima for methoxylated phenol substrates suggests that the two P. rivulosus T241i laccases possess potential for use in biotechnological applications. PMID:17805527

  11. Formation of charcoal from biomass in a sealed reactor

    SciTech Connect

    Mok, W.S.L.; Antal, M.J. Jr. ); Szabo, P.; Varhegyi, G.; Zelei, B. )

    1992-04-01

    In this paper, samples o cellulose, hemicellulose, lignin, and nine species of whole biomass are pyrolyzed in sealed reactors. Very high charcoal yields (e.g., 40% from cellulose, 48% from Eucalyptus gummifera) were obtained. Higher sample loading (sample mass per unit reactor volume) increased charcoal yield and the associated exothermic heat release and lowered the reaction onset temperature. These effects were induced by the vapor-phase concentrations of the volatile products, and not the system pressure. Addition of water catalyzed the reaction and increased the char yield. These observations suggest that charcoal formation is autocatalyzed by water, an initial pyrolysis product. When whole biomass was used as a feedstock, higher charcoal yields were obtained from species with high lignin and/or low hemicellulose content.

  12. 24. Photocopy of photograph. VIEW OF CHARCOAL KILNS AND IRON ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    24. Photocopy of photograph. VIEW OF CHARCOAL KILNS AND IRON PLANT FROM SOUTH END OF BEACH, probably 1901. (From the Robert Teagle Private Collection, Port Townsend, WA) - Irondale Iron & Steel Plant, Port Townsend, Jefferson County, WA

  13. INTERIOR DETAIL, STOVE. SMALL CHARCOAL FIRES WERE LIT IN THE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    INTERIOR DETAIL, STOVE. SMALL CHARCOAL FIRES WERE LIT IN THE DEPRESSIONS, WHICH WERE COVERED WITH IRON GRATES TO SUSPEND POTS OVER THE HEAT SOURCE - The Woodlands, 4000 Woodlands Avenue, Philadelphia, Philadelphia County, PA

  14. Relative efficacy and palatability of three activated charcoal mixtures.

    PubMed

    Navarro, R P; Navarro, K R; Krenzelok, E P

    1980-02-01

    The addition of bentonite with or without chocolate syrup improved the palatability of activated charcoal preparations. Furthermore, bentonite did not significantly reduce the efficacy of charcoal to absorb aspirin. Chocolate syrup reduced the adsorption effectiveness significantly. The mixtures have a reduced shelf-life when premixed with water. However, the dry ingredients can be pre-weighed and sealed in a large jar. Water can be added just prior to administration. PMID:7361450

  15. Chemical analysis and potential health risks of hookah charcoal.

    PubMed

    Elsayed, Yehya; Dalibalta, Sarah; Abu-Farha, Nedal

    2016-11-01

    Hookah (waterpipe) smoking is a very common practice that has spread globally. There is growing evidence on the hazardous consequences of smoking hookah, with studies indicating that its harmful effects are comparable to cigarette smoking if not worse. Charcoal is commonly used as a heating source for hookah smoke. Although charcoal briquettes are thought to be one of the major contributors to toxicity, their composition and impact on the smoke generated remains largely unidentified. This study aims to analyze the elemental composition of five different raw synthetic and natural charcoals by using Carbon-Hydrogen-Nitrogen (CHN) analysis, inductively coupled plasma (ICP), and scanning electron microscopy coupled with energy dispersive X-Ray spectrometry (SEM-EDS). Elemental analysis showed that the raw charcoals contain heavy metals such as zinc, iron, cadmium, vanadium, aluminum, lead, chromium, manganese and cobalt at concentrations similar, if not higher than, cigarettes. In addition, thermal desorption-gas chromatography-mass spectrometry (TD-GC-MS) was used to analyze the chemical composition of the smoke produced from burning the charcoal samples. The smoke emitted from charcoal was found to be the source of numerous compounds which could be hazardous to health. A total of seven carcinogens, 39 central nervous system depressants and 31 respiratory irritants were identified.

  16. Charcoal versus LPG grilling: A carbon-footprint comparison

    SciTech Connect

    Johnson, Eric

    2009-11-15

    Undoubtedly, grilling is popular. Britons fire up their barbeques some 60 million times a year, consuming many thousands of tonnes of fuel. In milder climates consumption is even higher, and in the developing world, charcoal continues to be an essential cooking fuel. So it is worth comparing the carbon footprints of the two major grill types, charcoal and LPG, and that was the purpose of the study this paper documents. Charcoal and LPG grill systems were defined, and their carbon footprints were calculated for a base case and for some plausible variations to that base case. In the base case, the charcoal grilling footprint of 998 kg CO{sub 2}e is almost three times as large as that for LPG grilling, 349 kg CO{sub 2}e. The relationship is robust under all plausible sensitivities. The overwhelming factors are that as a fuel, LPG is dramatically more efficient than charcoal in its production and considerably more efficient in cooking. Secondary factors are: use of firelighters, which LPG does not need; LPG's use of a heavier, more complicated grill; and LPG's use of cylinders that charcoal does not need.

  17. Fluorine gettering by activated charcoal in a radiation environment

    SciTech Connect

    Felker, L.K.; Toth, L.M.

    1988-10-01

    Activated charcoal has been shown to be an effective gettering agent for the fluorine gas that is liberated in a radiation environment. Even though activated charcoal is a commonly used getter, little is known about the radiation stability of the fluorine-charcoal product. This work has shown that not only is the product stable in high gamma radiation fields, but also that radiation enhances the capacity of the charcoal for the fluorine. The most useful application of this work is with the Molten Salt Reactor Experiment (MSRE) fuel salt because the radioactive components (fission products and actinides) cause radiolytic damage to the solid LiF-BeF/sub 2/-ZrF/sub 4/-UF/sub 4/ (64.5, 30.3, 5.0, 0.13 mol %, respectively) resulting in the liberation of fluorine gas. This work has also demonstrated that the maximum damage to the fuel salt by approx.3 /times/ 10/sup 7/ R/h gamma radiation is approximately 2%, at which point the rate of recombination of fluorine with active metal sites within the salt lattice equals the rate of fluorine generation. The enhanced reactivity of the activated charcoal and radiation stability of the product ensures that the gettered fluorine will stay sequestered in the charcoal.

  18. Chemical analysis and potential health risks of hookah charcoal.

    PubMed

    Elsayed, Yehya; Dalibalta, Sarah; Abu-Farha, Nedal

    2016-11-01

    Hookah (waterpipe) smoking is a very common practice that has spread globally. There is growing evidence on the hazardous consequences of smoking hookah, with studies indicating that its harmful effects are comparable to cigarette smoking if not worse. Charcoal is commonly used as a heating source for hookah smoke. Although charcoal briquettes are thought to be one of the major contributors to toxicity, their composition and impact on the smoke generated remains largely unidentified. This study aims to analyze the elemental composition of five different raw synthetic and natural charcoals by using Carbon-Hydrogen-Nitrogen (CHN) analysis, inductively coupled plasma (ICP), and scanning electron microscopy coupled with energy dispersive X-Ray spectrometry (SEM-EDS). Elemental analysis showed that the raw charcoals contain heavy metals such as zinc, iron, cadmium, vanadium, aluminum, lead, chromium, manganese and cobalt at concentrations similar, if not higher than, cigarettes. In addition, thermal desorption-gas chromatography-mass spectrometry (TD-GC-MS) was used to analyze the chemical composition of the smoke produced from burning the charcoal samples. The smoke emitted from charcoal was found to be the source of numerous compounds which could be hazardous to health. A total of seven carcinogens, 39 central nervous system depressants and 31 respiratory irritants were identified. PMID:27343945

  19. Species Identification and Variation in the North American Cranberry Fruit Rot Complex

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Complex mixtures of pathogenic fungi cause cranberry fruit rot, with the contribution by any given fungus to the disease varying from bed to bed, cultivar to cultivar, season to season, and across regions. Furthermore, population variability within the individual fungal species across growing region...

  20. Species Identification and Variation in the North American Cranberry Fruit Rot complex

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Complex mixtures of pathogenic fungi cause cranberry fruit rot, with the contribution by any given fungus to the disease varying from bed to bed, cultivar to cultivar, season to season, and across regions. Furthermore, population variability within the individual fungal species across growing region...

  1. Management of bull’s-eye rot of apple using pre- and postharvest fungicides

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bull’s-eye rot caused by Cryptosporiopsis kienholzii, Neofabraea alba, N. malicorticis and N. perennans is a common postharvest disease of apple and pear in the US Pacific Northwest. Fruit infection by these causal fungi occurs in the orchard and is latent at harvest. A primary practice for control ...

  2. Monitoring cotton root rot progression within and across growing seasons using remote sensing

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton root rot, caused by the soilborne fungus Phymatotrichopsis omnivore Shear (Duggar), is one of the most destructive plant diseases occurring throughout the southwestern U.S. More recently, a fungicide, flutriafol, has been evaluated in Texas and was found to have the potential for controlling ...

  3. Screening of pea genotypes for resistance to root rot caused by Rhizoctonia solani AG 8, 2012.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rhizoctonia solani AG 8 is one of the major pathogens that causes pea root rot and stunting in the Columbia Basin of Oregon and Washington. The disease is most severe in fields where wheat has been mono-cropped for a number of years or where cereal cover crops are incorporated just before pea seedin...

  4. Fruit age and development of Phytophthora fruit rot on resistant and susceptible watermelon lines

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phytophthora fruit rot caused by Phytophthora capsici is an emerging disease in most watermelon producing regions of Southeast U.S. and has resulted in severe losses to watermelon growers especially in GA, SC, and NC. We recently released four germplasm lines (USVL203-PFR, USVL020-PFR, USVL782-PFR,...

  5. Field Testing of Alfalfa Cultivars for resistance to Sclerotinia Crown and Stem Rot: Problems and Progress

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sclerotinia crown and stem rot (SCSR), caused by Sclerotinia trifoliorum, often causes severe losses in late-summer seeded alfalfa. The disease may be especially destructive when no-till methods are used. Most alfalfa cultivars presently available may be severely damaged when inoculcum concentrat...

  6. Postharvet losses associated with Rhizoctonia crown and root rot of sugarbeet

    Technology Transfer Automated Retrieval System (TEKTRAN)

    As the prevalence of Rhizoctonia crown and root rot (RCRR) increases, more diseased sugarbeet (Beta vulgaris L.) roots are destined for storage piles. To investigate the effect of RCRR on storage properties, roots with similar symptoms were grouped and extractable sucrose, invert sugar, and respirat...

  7. Resistance in watermelon rootstocks to crown rot caused by Phytophthora capsici

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phytophthora crown and fruit rot caused by Phytophthora capsici is becoming an important and emerging disease of watermelon (Citrullus lanatus) in south eastern United States. In recent years, the practice of grafting seedless watermelons (triploids) onto rootstocks belonging to other Cucurbitaceae...

  8. Effect of phytophthora capsici crown rot on watermelon rootstocks and grafts

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Crown and fruit rot caused by Phytophthora capsici is becoming an important and emerging disease of watermelon in the southeastern United States. In recent years, the practice of grafting seedless watermelons onto rootstocks belonging to other Cucurbitaceae genera is also gaining acceptance in our l...

  9. Identification and characterization of a novel Iraqi isolate of Fusarium pseudograminearum causing crown rot in wheat.

    PubMed

    Hameed, M A; Rana, R M; Ali, Z

    2012-01-01

    Crown rot is one of the main important fungal diseases affecting wheat in many areas of the world, including Australia, USA, and Iran. Until now, there had been no report of this pathogen in Iraq. Plants displaying crown rot symptoms were observed in Shaat Alarab (Basra, Iraq); we investigated the causal agent of the disease. Samples were surface-sterilized in bleach (1% available chlorine) and cultured on quarter-strength potato dextrose agar plates. DNA was extracted from fungal mycelia, using a modified CTAB protocol. The ITS/5.8S regions were amplified using primer pair ITS1 and ITS4. PCR products purified using a gel extraction kit were sequenced. The sequence that was detected was used to BLAST against NCBI data. The most similar sequence was the ITS/5.8S rDNA region of Fusarium pseudograminearum (strain NRRL28062), showing 97.95% identity. This species normally causes crown rot, resulting in severe damage under dry spring conditions. A pathogenicity test employed to assess the disease-causing ability of the strain showed significant disease symptoms up to 57% infected spikelets. The results confirmed the presence of F. pseudograminearum as a causal agent of wheat crown rot in Iraq. The presence of this pathogen demands further investigations to develop resistant cultivars and/or mechanical control.

  10. Assessment of inoculation methods to identify resistance to Fusarium crown rot in wheat

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Crown rot, caused by Fusarium culmorum and Fusarium pseudograminearum, is one of the most pervasive diseases of wheat throughout the world. F. culmorum is the most prevalent causal agent in Turkey while F. pseudograminearum is the most predominant in the US. Consistent and reliable screening methods...

  11. Pre-breeding for root rot resistance using root morphology and shoot length.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Our goal is to identify new wheat varieties that display field resistance/tolerance to root rot diseases, such as those caused by Rhizoctonia and Pythium. We are tapping into the genetic diversity of ‘synthetic’ hexaploid wheats (genome composition AABBDD), which were generated at CIMMYT by artifici...

  12. In vitro study on fluoxetine adsorption onto charcoal using potentiometry.

    PubMed

    Atta-Politou, J; Skopelitis, I; Apatsidis, I; Koupparis, M

    2001-01-01

    This in vitro investigation was performed to study the adsorption rate constant as well as the adsorption characteristics of fluoxetine (F) to activated charcoal and its commercial formulation Carbomix powder in simulated gastric (pH 1.2) fluid environment. Ion-selective electrode (ISE) potentiometry, based on the selective, direct and continuous monitoring of F with an F-ISE constructed in our laboratory was used. The method used in the kinetic experiments consists of the rapid addition of a slurry containing the charcoal into the drug solution under stirring and continuous recording of the F-ISE potential until the establishment of equilibrium. The free ionized drug concentration at appropriate time intervals was calculated from the recorded adsorption curve and the apparent adsorption rate constant was estimated assuming pseudo first order kinetics. Within run R.S.D. of the estimates ranged from 0.24 to 11.5%, while between run R.S.D. (n=3-4) ranged from 0.90 to 13.8%. A linear relationship was found between the apparent adsorption rate constants and the amount of charcoal used with slopes (+/-S.D.) for activated charcoal and Carbomix equal to 1.14(+/-0.21) and 0.146(+/-0.009) s(-1)g(-1), respectively. Successive additions of microvolumes of F solution were made into a charcoal slurry with measurement of the F-ISE potential at equilibrium. The maximum adsorption capacity values (+/-S.D.) of activated charcoal and Carbomix were 254.8+/-1.8 and 405+/-41 mg/g, respectively while the affinity constant values (+/-S.D.) were 45.6+/-2.2 and 55.5+/-2.9 l/g, respectively. The adsorption of F to charcoals was rapid and for amounts of charcoal 10 times greater than the amount of the drug, 95% of F was adsorbed within the first 5 min. Relative to the toxic and lethal doses in cases of F intoxications, both types of charcoals tested adsorbed effectively F at gastric pH. Carbomix can be considered as appropriate charcoal formulation for medical treatment in cases of F

  13. Adsorption effects of activated charcoal on metaldehyde toxicity in rats.

    PubMed

    Shintani, S; Goto, K; Endo, Y; Iwamoto, C; Ohata, K

    1999-02-01

    Metaldehyde has been widely used as a main ingredient of solid fuel for making fire and slug baits in Japan. It is also marketed as a color flame tablet for party goods (ENGELFIRE). Consequently, children have been poisoned by eating such tablets which they mistook for candy. As a result, poison information center calls are increasing. According to POISINDEX, the treatment for metaldehyde poisoning consists in prevention of adsorption by activated charcoal, seizure control and airway protection. However, the optimum dose of charcoal is not established. We studied the quantitative adsorption capacity of activated charcoal for acute oral toxicity of metaldehyde in rats. In vivo toxicity and absorption tests for metaldehyde in Wister rats were done. The detoxifying effect of activated charcoal on metaldehyde toxicity and inhibition of metaldehyde absorption were investigated. Ratios used of po activated charcoal given 30 min after dosing to 400 mg metaldehyde/kg po were 5:1, 2:1, 1:1, 0.5:1. Serum metaldehyde was determined by gas chromatography in the control group (no charcoal) and the various experimental groups. Metaldehyde mortality was completely prevented at the ratio of 5:1. Gastrointestinal absorption of metaldehyde was reduced significantly by 45.3% in comparison to the control rats. There was no acetaldehyde detected in the serum of the metaldehyde-dosed rats. Metaldehyde poisoning may be prevented by early po administration of activated charcoal in a ratio of > 5:1 compared to metaldehyde. The theory that acetaldehyde is the primary toxic agent in metaldehyde poisoning should be re-evaluated.

  14. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/brown rot paradigm for wood decay fungi

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade ...

  15. Pyramiding Sclerotinia head rot and stalk rot resistances into elite sunflower breeding lines with the aid of DNA markers

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Work was conducted in 2008 to determine the stalk rot resistance of RILs from the RHA 280 x RHA 801 population, as well as to begin introgression of previously identified QTL for head rot resistance into elite sunflower germplasm lines. The stalk rot RILs and their testcrosses with cms HA 89 were t...

  16. Prevalence of Erwinia soft rot affecting cut foliage, Dracaena sanderiana ornamental industry and solution towards its management.

    PubMed

    Kayalvily, Thio Desiya; Jegathambigai, V; Karunarathne, M D S D; Svinningen, Arne; Mikunthan, G

    2012-01-01

    The study was carried out under net house conditions at Green Farms Ltd, Marawila to determine the occurrence and severity of Erwinia soft rot disease in Dracaena sanderiana plants and to formulate the possible control measures. Field experiment was carried out to manage the soft rot disease in D. sanderiana plants. Three different soil treatments with vermicompost, cow dung and poultry manure were tested to manage the disease and plots without application were kept as control. Percent disease incidence, disease reduction and growth parameters were recorded and data were statistically analyzed. Higher percentage of disease reduction was observed in vermicompost (80%) treated plots than those with cow dung (60%) and poultry manure treated. Sprinkler application of water was found favorable to spread soft rot disease and watering through horse pope had lessened the disease incidence significantly. Moreover plant height, shoot and root biomass, number of leaves per plant, leaf length and leaf width were significantly high in vermicompost media. Weeding, removal of diseased leaves and plants, and avoiding sprinkler irrigation were helpful to reduce the disease spread from plant to plant. Vermicompost is the best substrate for suppression of the disease and promoting the growth of plant. Among the different water management practices tested to reduce the disease severity of Erwinia soft rot disease in D. sanderiana plants, water irrigated through the horse pipe was effective compare to sprinkler application. In-vitro experiment conducted to manage the Erwinia soft rot disease by using bio-agent, Pseudomonas fluorescens was found effective to reduce the growth of Erwinia under in-vitro conditions. PMID:23878983

  17. Prevalence of Erwinia soft rot affecting cut foliage, Dracaena sanderiana ornamental industry and solution towards its management.

    PubMed

    Kayalvily, Thio Desiya; Jegathambigai, V; Karunarathne, M D S D; Svinningen, Arne; Mikunthan, G

    2012-01-01

    The study was carried out under net house conditions at Green Farms Ltd, Marawila to determine the occurrence and severity of Erwinia soft rot disease in Dracaena sanderiana plants and to formulate the possible control measures. Field experiment was carried out to manage the soft rot disease in D. sanderiana plants. Three different soil treatments with vermicompost, cow dung and poultry manure were tested to manage the disease and plots without application were kept as control. Percent disease incidence, disease reduction and growth parameters were recorded and data were statistically analyzed. Higher percentage of disease reduction was observed in vermicompost (80%) treated plots than those with cow dung (60%) and poultry manure treated. Sprinkler application of water was found favorable to spread soft rot disease and watering through horse pope had lessened the disease incidence significantly. Moreover plant height, shoot and root biomass, number of leaves per plant, leaf length and leaf width were significantly high in vermicompost media. Weeding, removal of diseased leaves and plants, and avoiding sprinkler irrigation were helpful to reduce the disease spread from plant to plant. Vermicompost is the best substrate for suppression of the disease and promoting the growth of plant. Among the different water management practices tested to reduce the disease severity of Erwinia soft rot disease in D. sanderiana plants, water irrigated through the horse pipe was effective compare to sprinkler application. In-vitro experiment conducted to manage the Erwinia soft rot disease by using bio-agent, Pseudomonas fluorescens was found effective to reduce the growth of Erwinia under in-vitro conditions.

  18. Effects of charcoal kiln saunas (Jjimjilbang) on psychological states.

    PubMed

    Hayasaka, Shinya; Nakamura, Yosikazu; Kajii, Eiji; Ide, Masahiro; Shibata, Yosuke; Noda, Tatsuya; Murata, Chiyoe; Nagata, Katsutaro; Ojima, Toshiyuki

    2008-05-01

    This uncontrolled intervention study explored the effects of sauna bathing utilizing residual heat from charcoal kilns (charcoal kiln saunas) on psychological states. Forty-five volunteers (24 males and 21 females; mean age 51.9 years (S.D. 15.7) visiting a bamboo charcoal kiln in Japan participated in the study. They completed a shortened version of the Profile of Mood States (POMS) and State-Trait Anxiety Inventory (STAI) before and after charcoal kiln sauna bathing in order to determine mood and anxiety states. Six factors relating to mood were measured using the POMS: Tension-Anxiety, Depression-Dejection, Anger-Hostility, Vigor, Fatigue, and Confusion. The two anxiety concepts of state anxiety and trait anxiety were also measured. Changes in psychological states before and after sauna bathing were then determined. All mood scales and both manifest anxiety measures were improved after sauna bathing. Charcoal kiln sauna bathing appears to improve mood and decrease anxiety. It is a limitation of this study that this was a descriptive prospective and an uncontrolled intervention study. Further investigation of the improvement of trait anxiety is required.

  19. Systems approach-based mitigation of postharvest diseases to overcome trade barriers for Washington apples

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Speck rot caused by Phacidiopycnis washingtonensis and Sphaeropsis rot caused by S. pyriputrescens were reported as new postharvest fruit rot diseases in Washington State in the mid-2000s. Both diseases can cause significant postharvest losses of fruit if left uncontrolled, and the two fungi have be...

  20. Simultaneous Detection of Brown Rot- and Soft Rot-Causing Bacterial Pathogens from Potato Tubers Through Multiplex PCR.

    PubMed

    Ranjan, R K; Singh, Dinesh; Baranwal, V K

    2016-11-01

    Ralstonia solanacearum (Smith) Yabuuchi et al. and Erwinia carotovora subsp. carotovora (Jones) Bergey et al. (Pectobacterium carotovorum subsp. carotovorum) are the two major bacterial pathogens of potato causing brown rot (wilt) and soft rot diseases, respectively, in the field and during storage. Reliable and early detection of these pathogens are keys to avoid occurrence of these diseases in potato crops and reduce yield loss. In the present study, multiplex polymerase chain reaction (PCR) protocol was developed for simultaneous detection of R. solanacearum and E. carotovora subsp. carotovora from potato tubers. A set of oligos targeting the pectatelyase (pel) gene of E. carotovora subsp. carotovora and the universal primers based on 16S r RNA gene of R. solanacearum were used. The standardized multiplex PCR protocol could detect R. solanacearum and E. carotovora subsp. carotovora up to 0.01 and 1.0 ng of genomic DNA, respectively. The protocol was further validated on 96 stored potato tuber samples, collected from different potato-growing states of India, viz. Uttarakhand, Odisha, Meghalaya and Delhi. 53.1 % tuber samples were positive for R. solanacearum, and 15.1 % of samples were positive for E. carotovora subsp. carotovora, and both the pathogens were positive in 26.0 % samples when BIO-PCR was used. This method offers sensitive, specific, reliable and fast detection of two major bacterial pathogens from potato tubers simultaneously, particularly pathogen-free seed certification in large scale. PMID:27480266

  1. Simultaneous Detection of Brown Rot- and Soft Rot-Causing Bacterial Pathogens from Potato Tubers Through Multiplex PCR.

    PubMed

    Ranjan, R K; Singh, Dinesh; Baranwal, V K

    2016-11-01

    Ralstonia solanacearum (Smith) Yabuuchi et al. and Erwinia carotovora subsp. carotovora (Jones) Bergey et al. (Pectobacterium carotovorum subsp. carotovorum) are the two major bacterial pathogens of potato causing brown rot (wilt) and soft rot diseases, respectively, in the field and during storage. Reliable and early detection of these pathogens are keys to avoid occurrence of these diseases in potato crops and reduce yield loss. In the present study, multiplex polymerase chain reaction (PCR) protocol was developed for simultaneous detection of R. solanacearum and E. carotovora subsp. carotovora from potato tubers. A set of oligos targeting the pectatelyase (pel) gene of E. carotovora subsp. carotovora and the universal primers based on 16S r RNA gene of R. solanacearum were used. The standardized multiplex PCR protocol could detect R. solanacearum and E. carotovora subsp. carotovora up to 0.01 and 1.0 ng of genomic DNA, respectively. The protocol was further validated on 96 stored potato tuber samples, collected from different potato-growing states of India, viz. Uttarakhand, Odisha, Meghalaya and Delhi. 53.1 % tuber samples were positive for R. solanacearum, and 15.1 % of samples were positive for E. carotovora subsp. carotovora, and both the pathogens were positive in 26.0 % samples when BIO-PCR was used. This method offers sensitive, specific, reliable and fast detection of two major bacterial pathogens from potato tubers simultaneously, particularly pathogen-free seed certification in large scale.

  2. First Report of Potato Stem-End Rot Caused by Fusarium oxysporum in Korea.

    PubMed

    Aktaruzzaman, Md; Xu, Sheng-Jun; Kim, Joon-Young; Woo, Jae-Hyoun; Hahm, Young-Il; Kim, Byung-Sup

    2014-06-01

    In this study, we identified the causative agent of stem-end rot in potatoes that were grown in Gangwon alpine areas of Korea in 2013. The disease symptoms included appearance of slightly sunken circular lesion with corky rot on the potato surface at the stem-end portion. The fungal species isolated from the infected potatoes were grown on potato dextrose agar and produced white aerial mycelia with dark violet pigments. The conidiophores were branched and monophialidic. The microconidia had ellipsoidal to cylindrical shapes and ranged from 2.6~11.4 × 1.9~3.5 µm in size. The macroconidia ranged from 12.7~24.7 × 2.7~3.6 µm in size and had slightly curved or fusiform shape with 2 to 5 septate. Chlamydospores ranged from 6.1~8.1 × 5.7~8.3 µm in size and were present singly or in pairs. The causal agent of potato stem-end rot was identified as Fusarium oxysporum by morphological characterization and by sequencing the internal transcribed spacer (ITS1 and ITS4) regions of rRNA. Artificial inoculation of the pathogen resulted in development of disease symptoms and the re-isolated pathogen showed characteristics of F. oxysporum. To the best of our knowledge, this is the first study to report that potato stem-end rot is caused by F. oxysporum in Korea.

  3. Pore structure of the activated coconut shell charcoal carbon

    NASA Astrophysics Data System (ADS)

    Budi, E.; Nasbey, H.; Yuniarti, B. D. P.; Nurmayatri, Y.; Fahdiana, J.; Budi, A. S.

    2014-09-01

    The development of activated carbon from coconut shell charcoal has been investigated by using physical method to determine the influence of activation parameters in term of temperature, argon gas pressure and time period on the pore structure of the activated carbon. The coconut shell charcoal was produced by pyrolisis process at temperature of about 75 - 150 °C for 6 hours. The charcoal was activated at various temperature (532, 700 and 868 °C), argon gas pressure (6.59, 15 and 23.4 kgf/cm2) and time period of (10, 60 and 120 minutes). The results showed that the pores size were reduced and distributed uniformly as the activation parameters are increased.

  4. Application of activated charcoal radon collectors in high humidity environments.

    PubMed

    Iimoto, Takeshi; Tokonami, Shinji; Morishita, Yasuaki; Kosako, Toshiso

    2005-01-01

    Most commercially based activated charcoal radon collectors were designed for use in indoor environments. However, at present, they are often used for research in radon surveys in unique environments, such as in the bathrooms, underground areas, mines, caves and tunnels. In these environments, the relative humidity would be around 100%, and a change in the sensitivity of cpm(Bq m(-3))(-1)(radon) would occur. For this study, the reduction in the sensitivity of activated charcoal radon collector due to environmental humidity was investigated, and the data correction was discussed. Here, ST-100 (Pico-Rad) was selected as an example of a familiar activated charcoal radon collector. According to our performance test, the humidity of 90% (20 degrees C) resulted in a 15% reduction of the sensitivity for 24 h collection. The ST-100 user should discuss the necessity of data correction by comparing the change of sensitivity with other levels of estimation errors.

  5. Influence of iron on cylindrocarpon root rot development on ginseng.

    PubMed

    Rahman, Mahfuzur; Punja, Zamir K

    2006-11-01

    ABSTRACT Cylindrocarpon root rot, caused by Cylindrocarpon destructans, is an important disease on ginseng (Panax quinquefolius) in Canada. We studied the effects of iron (Fe) on disease severity and pathogen growth. When Hoagland's solution was amended with Fe at 56 and 112 mug/ml compared with 0 mug/ml, disease initiation and final severity on hydroponically maintained ginseng roots was significantly (P<0.0001) enhanced. Under field conditions, wounding of roots with a fine needle followed by application of 0.05% FeNaEDTA to the rhizosphere of treated plants significantly enhanced Cylindrocarpon root rot in 2003 and 2004 compared with unwounded roots with Fe or wounded roots without Fe. Foliar applications of Fe (as FeNaEDTA) to ginseng plants three times during the 2002 and 2003 growing seasons significantly increased Fe levels in root tissues. These roots developed larger lesions following inoculation with C. destructans in vitro. When radioactive Fe ((59)Fe) was applied to the foliage of ginseng plants, it was detected in the secondary phloem and in cortical and epidermal tissues within 1 week. Artificially wounded areas on the roots accumulated more (59)Fe than healthy areas. Diseased tissue also had threefold higher levels of phenolic compounds and Fe compared with adjoining healthy tissues. High-performance liquid chromatography analysis revealed enhanced levels of protocatechuic acid, chlorogenic acid, caffeic acid, ferulic acid, cinnamic acid, phloridizin, and quercetin. Phenolic compounds produced in diseased and wounded tissues sequestered Fe in vitro. The effects of Fe on mycelial growth, conidial germ tube length, and secondary branching of germ tubes of C. destructans were examined in vitro. When grown on Chrome-azurol S medium, Fe also was sequestered by C. destructans through siderophore production, which was visualized as a clearing pigmented zone at the margin of colonies. Mycelial dry weight was significantly increased in glucose/ yeast broth

  6. Changes in Molecular Size Distribution of Cellulose during Attack by White Rot and Brown Rot Fungi

    PubMed Central

    Kleman-Leyer, Karen; Agosin, Eduardo; Conner, Anthony H.; Kirk, T. Kent

    1992-01-01

    The kinetics of cotton cellulose depolymerization by the brown rot fungus Postia placenta and the white rot fungus Phanerochaete chrysosporium were investigated with solid-state cultures. The degree of polymerization (DP; the average number of glucosyl residues per cellulose molecule) of cellulose removed from soil-block cultures during degradation by P. placenta was first determined viscosimetrically. Changes in molecular size distribution of cellulose attacked by either fungus were then determined by size exclusion chromatography as the tricarbanilate derivative. The first study with P. placenta revealed two phases of depolymerization: a rapid decrease to a DP of approximately 800 and then a slower decrease to a DP of approximately 250. Almost all depolymerization occurred before weight loss. Determination of the molecular size distribution of cellulose during attack by the brown rot fungus revealed single major peaks centered over progressively lower DPs. Cellulose attacked by P. chrysosporium was continuously consumed and showed a different pattern of change in molecular size distribution than cellulose attacked by P. placenta. At first, a broad peak which shifted at a slightly lower average DP appeared, but as attack progressed the peak narrowed and the average DP increased slightly. From these results, it is apparent that the mechanism of cellulose degradation differs fundamentally between brown and white rot fungi, as represented by the species studied here. We conclude that the brown rot fungus cleaved completely through the amorphous regions of the cellulose microfibrils, whereas the white rot fungus attacked the surfaces of the microfibrils, resulting in a progressive erosion. PMID:16348694

  7. A genome-wide association study reveals genes associated with fusarium ear rot resistance in a maize core diversity panel

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fusarium ear rot is a common disease of maize that affects food and feed quality globally. Resistance to the disease is highly quantitative, and maize breeders have difficulty incorporating polygenic resistance alleles from unadapted donor sources into elite breeding populations without having a ne...

  8. Agreement to market white rot fungi technology

    SciTech Connect

    Not Available

    1988-11-01

    Remediation Technologies, Inc. (ReTeC) has signed a licensing agreement with Utah State University (USU) for the joint commercialization of application of white rot fungi to bioremediate sludges and contaminated soils. The initial effort will focus on the use of composting technology for bioremediation of soils contaminated with coal tar residuals resulting from wood preserving operations and former gas manufacturing sites.

  9. Hands-On Whole Science. What Rots?

    ERIC Educational Resources Information Center

    Markle, Sandra

    1991-01-01

    Presents activities on the science of garbage to help elementary students learn to save the earth. A rotting experiment teaches students what happens to apple slices sealed in plastic or buried in damp soil. Other activities include reading stories on the subject and conducting classroom composting or toxic materials projects. (SM)

  10. Development of a ROT22 - DATAMAP interface

    NASA Technical Reports Server (NTRS)

    Shenoy, K. R.; Waak, T.; Brieger, J. T.

    1986-01-01

    This report (Contract NAS2-10331- Mod 10), outlines the development and validation of an interface between the three-dimensional transonic analysis program ROT22 and the Data from Aeromechanics Test and Analytics-Management and Analysis Package (DATAMAP). After development of the interface, the validation is carried out as follows. First, the DATAMAP program is used to analyze a portion of the Tip Aerodynamics and Acoustics Test (TAAT) data. Specifically, records 2872 and 2873 are analyzed at an azimuth of 90 deg, and record 2806 is analyzed at 60 deg. Trim conditions for these flight conditions are then calculated using the Bell performance prediction program ARAM45. Equivalent shaft, pitch, and twist angles are calculated from ARAM45 results and used as input to the ROT22 program. The interface uses the ROT22 results and creates DATAMAP information files from which the surface pressure contours and sectional pressure coefficients are plotted. Twist angles input to ROT22 program are then iteratively modified in the tip region until the computed pressure coefficients closely match the measurements. In all cases studied, the location of the shock is well predicted. However, the negative pressure coefficients were underpredicted. This could be accounted for by blade vortex interaction effects.

  11. Postharvest Rhizopus rot on sugar beet

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rhizopus species have been reported as a minor post-harvest rot on sugar beet, particularly under temperatures above 5 deg C. In 2010, Rhizopus was isolated from beets collected from Michigan storage piles in February at a low frequency. However, recent evidence from Michigan has found a high incide...

  12. Evaluation of charcoal sorbents for helium cryopumping in fusion reactors

    SciTech Connect

    Tobin, A.G.; Sedgley, D.W.; Batzer, T.H.; Call, W.R.

    1987-01-01

    Improved methods for cryopumping helium were developed for application to fusion reactors where high helium generation rates are expected. In this study, small coconut charcoal granules were utilized as the sorbent, and braze alloys and low temperature curing cements were used as the bonding agents for attachment to a copper support structure. Problems of scale-up of the bonding agent to a 40 cm diam panel were also investigated. Our results indicate that acceptable helium pumping performance of braze bonded and cement bonded charcoals can be achieved over the range of operating conditions expected in fusion reactors.

  13. Can Charcoal Provide Information About Fire Effects and Fire Severity?

    NASA Astrophysics Data System (ADS)

    Belcher, Claire; Hudpsith, Victoria; Doerr, Stefan; Santin, Cristina

    2016-04-01

    Building an understanding of the impact of a wildfire is critical to the management of ecosystems. Aspects of fire severity such as the amount of soil heating, can relate to post-fire ecosystem recovery. Yet, there is no quantitative measure of this in current post-burn fire severity assessments, which are mostly qualitative ground-based visual assessments of organic matter loss, and as such can be subjective and variable between ecosystems. In order to develop a unifying fire severity assessment we explore the use of charcoal produced during a wildfire, as a tool. Charcoal has been suggested to retain some information about the nature of the fire in which it was created and one such physical property of charcoal that can be measured post-fire is its ability to reflect light when studied under oil using reflectance microscopy. The amount of light reflected varies between charcoals and is thought to be explained by the differential ordering of graphite-like phases within the char however, to what aspects of a fire's nature this alteration pertains is unknown. We have explored the formation of charcoal reflectance in 1) laboratory-based experiments using an iCone calorimeter and in 2) experimental forest scale and natural wildland fires occurring in Canada in spring 2015. In our laboratory experiments we assessed the formation and evolution of charcoal reflectance during pre-ignition heating, peak fire intensity through to the end of flaming and the transition to oxidative/smoldering heating regimes. In the prescribed and natural wildland fires we positioned the same woods used in our laboratory experiments, rigged with thermocouples in the path of oncoming fires in order to assess the resulting charcoal reflectance in response to the heating regime imposed by the fire on the samples. In this presentation we will outline our approach, findings and discuss the potential for charcoal reflectance to provide a tool in post-fire assessments seeking to determine levels of

  14. Charcoal kiln relicts - a favorable site for tree growth?

    NASA Astrophysics Data System (ADS)

    Buras, Allan; Hirsch, Florian; van der Maaten, Ernst; Takla, Melanie; Räbiger, Christin; Cruz Garcia, Roberto; Schneider, Anna; Raab, Alexandra; Raab, Thomas; Wilmking, Martin

    2015-04-01

    Soils with incompletely combusted organic material (aka 'black carbon') are considered fertile for plant growth. Considerable enrichment of soils with black carbon is known from Chernozems, from anthropogenic induced altering of soils like the 'Terra Preta' in South America (e.g. Glaser, 2001), and from charcoal kiln relicts. Recent studies have reported a high spatial frequency of charcoal kiln relicts in the Northeastern German lowlands (Raab et al., 2015), which today are often overgrown by forest plantations. In this context the question arises whether these sites are favorable for tree growth. Here we compare the performance of 22 Pinus sylvestris individuals - a commonly used tree species in forestry - growing on charcoal kiln relicts with 22 control trees. Growth performance (height growth and diameter growth) of the trees was determined using dendrochronological techniques, i.e. standard ring-width measurements were undertaken on each two cores per tree and tree height was measured in the field. Several other wood properties such as annual wood density, average resin content, as well as wood chemistry were analyzed. Our results indicate that trees growing on charcoal kiln relicts grow significantly less and have a significantly lower wood density in comparison with control trees. Specific chemical components such as Manganese as well as resin contents were significantly higher in kiln trees. These results highlight that tree growth on charcoal kiln relicts is actually hampered instead of enhanced. Possibly this is a combined effect of differing physical soil properties which alter soil water accessibility for plants and differing chemical soil properties which may negatively affect tree growth either if toxic limits are surpassed or if soil nutrient availability is decreased. Additional soil analyses with respect to soil texture and soil chemistry shall reveal further insight into this hypothesis. Given the frequent distribution of charcoal kiln relicts in

  15. Enhancing methane production during the anaerobic digestion of crude glycerol using Japanese cedar charcoal.

    PubMed

    Watanabe, Ryoya; Tada, Chika; Baba, Yasunori; Fukuda, Yasuhiro; Nakai, Yutaka

    2013-12-01

    The use of Japanese cedar charcoal as a support material for microbial attachment could enhance methane production during anaerobic digestion of crude glycerol and wastewater sludge. Methane yield from a charcoal-containing reactor was approximately 1.6 times higher than that from a reactor without charcoal, and methane production was stable over 50 days when the loading rate was 2.17 g chemical oxygen demand (COD) L(-1) d(-1). Examination of microbial communities on the charcoal revealed the presence of Uncultured Desulfovibrio sp. clone V29 and Pelobacter seleniigenes, known as 1,3-propandiol degraders. Hydrogenotrophic methanogens were also detected in the archaeal community on the charcoal. Methanosaeta, Methanoregula, and Methanocellus were present in the charcoal-containing reactor. The concentration of propionate in the charcoal-containing reactor was also lower than that in the control reactor. These results suggest that propionate degradation was enhanced by the consumption of hydrogen by hydrogenotrophic methanogens on the charcoal.

  16. Air quality index from charcoal production sites, carboxyheamoglobin and lung function among occupationally exposed charcoal workers in South Western Nigeria.

    PubMed

    Olujimi, O O; Ana, G R E E; Ogunseye, O O; Fabunmi, V T

    2016-01-01

    Charcoal production is often accompanied with gaseous and particulate emission into the atmosphere and occupationally exposed workers could be affected. This cross sectional comparative study was carried out to assess the levels of carbon monoxide (CO), carbon dioxide (CO2), sulphur dioxide (SO2), nitrogen dioxide (NO2) and particulate matter (PM2.5) generated during the phases of charcoal production and their relationship with certain biomarkers among charcoal workers (subjects) and non-charcoal workers (controls) such as carboxyhaemoglobin (COHb), forced expiratory volume in the first second of expiration (FEV1), peak expiratory flow rate (PEFR) and body mass index (BMI) in Igbo-Ora, Oyo State and Alabata, Ogun State, which are two of the major hubs of charcoal production in South Western Nigeria. Four communities in Igbo-Ora and six communities in Alabata were purposively selected and levels of pollutant gases were assessed using appropriate gas meters, PM2.5 was assessed with Thermo Scientific MIE pDR-1500, FEV1 and PEFR were measured with Piko-1 spirometer while COHb was assessed using non-invasive pulse CO-oximeter (Rad 57). Data were statistically analyzed and results were compared with recommended guidelines. The mean FEV1, PEFR, COHb and BMI for subjects and controls were 2.35 ± 0.73 and 2.69 ± 0.56, 253.72 ± 103.45 and 330.02 ± 94.61 (p < 0.01), 13.28 ± 3.91 and 8.50 ± 3.68 (p < 0.01) and 21.97 ± 2.19 and 23.36 ± 3.74 (p < 0.05) respectively. There was a statistically significant difference between actual and expected values of FEV1 (p < 0.01) and PEFR (p < 0.01) among charcoal workers. There existed a positive correlation between CO and COHb while FEV1 and PEFR correlated negatively with PM2.5. The study showed that charcoal workers are exposed to high levels of CO and PM2.5, contributing to lowered respiratory functions for FEV1 and PEFR and high levels of COHb compared to the control group. Routine respiratory and

  17. Air quality index from charcoal production sites, carboxyheamoglobin and lung function among occupationally exposed charcoal workers in South Western Nigeria.

    PubMed

    Olujimi, O O; Ana, G R E E; Ogunseye, O O; Fabunmi, V T

    2016-01-01

    Charcoal production is often accompanied with gaseous and particulate emission into the atmosphere and occupationally exposed workers could be affected. This cross sectional comparative study was carried out to assess the levels of carbon monoxide (CO), carbon dioxide (CO2), sulphur dioxide (SO2), nitrogen dioxide (NO2) and particulate matter (PM2.5) generated during the phases of charcoal production and their relationship with certain biomarkers among charcoal workers (subjects) and non-charcoal workers (controls) such as carboxyhaemoglobin (COHb), forced expiratory volume in the first second of expiration (FEV1), peak expiratory flow rate (PEFR) and body mass index (BMI) in Igbo-Ora, Oyo State and Alabata, Ogun State, which are two of the major hubs of charcoal production in South Western Nigeria. Four communities in Igbo-Ora and six communities in Alabata were purposively selected and levels of pollutant gases were assessed using appropriate gas meters, PM2.5 was assessed with Thermo Scientific MIE pDR-1500, FEV1 and PEFR were measured with Piko-1 spirometer while COHb was assessed using non-invasive pulse CO-oximeter (Rad 57). Data were statistically analyzed and results were compared with recommended guidelines. The mean FEV1, PEFR, COHb and BMI for subjects and controls were 2.35 ± 0.73 and 2.69 ± 0.56, 253.72 ± 103.45 and 330.02 ± 94.61 (p < 0.01), 13.28 ± 3.91 and 8.50 ± 3.68 (p < 0.01) and 21.97 ± 2.19 and 23.36 ± 3.74 (p < 0.05) respectively. There was a statistically significant difference between actual and expected values of FEV1 (p < 0.01) and PEFR (p < 0.01) among charcoal workers. There existed a positive correlation between CO and COHb while FEV1 and PEFR correlated negatively with PM2.5. The study showed that charcoal workers are exposed to high levels of CO and PM2.5, contributing to lowered respiratory functions for FEV1 and PEFR and high levels of COHb compared to the control group. Routine respiratory and

  18. Research report: Charcoal type used for hookah smoking influences CO production.

    PubMed

    Medford, Marlon A; Gasier, Heath G; Hexdall, Eric; Moffat, Andrew D; Freiberger, John J; Moon, Richard E

    2015-01-01

    A hookah smoker who was treated for severe carbon monoxide poisoning with hyperbaric oxygen reported using a different type of charcoal prior to hospital admission, i.e., quick-light charcoal. This finding led to a study aimed at determining whether CO production differs between charcoals commonly used for hookah smoking, natural and quick-light. Our hypothesis was that quick-light charcoal produces significantly more CO than natural charcoal. A medium-sized hookah, activated charcoal filter, calibrated syringe, CO gas analyzer and infrared thermometer were assembled in series. A single 9-10 g briquette of either natural or quick-light charcoal was placed atop the hookah bowl and ignited. CO output (ppm) and temperature (degrees C) were measured in three-minute intervals over 90 minutes. The mean CO levels produced by quick-light charcoal over 90 minutes was significantly higher (3728 ± 2028) compared to natural charcoal (1730 ± 501 ppm, p = 0.016). However, the temperature was significantly greater when burning natural charcoal (292 ± 87) compared to quick-light charcoal (247 ± 92 degrees C, p = 0.013). The high levels of CO produced when using quick-light charcoals may be contributing to the increase in reported hospital admissions for severe CO poisoning. PMID:26403022

  19. Research report: Charcoal type used for hookah smoking influences CO production.

    PubMed

    Medford, Marlon A; Gasier, Heath G; Hexdall, Eric; Moffat, Andrew D; Freiberger, John J; Moon, Richard E

    2015-01-01

    A hookah smoker who was treated for severe carbon monoxide poisoning with hyperbaric oxygen reported using a different type of charcoal prior to hospital admission, i.e., quick-light charcoal. This finding led to a study aimed at determining whether CO production differs between charcoals commonly used for hookah smoking, natural and quick-light. Our hypothesis was that quick-light charcoal produces significantly more CO than natural charcoal. A medium-sized hookah, activated charcoal filter, calibrated syringe, CO gas analyzer and infrared thermometer were assembled in series. A single 9-10 g briquette of either natural or quick-light charcoal was placed atop the hookah bowl and ignited. CO output (ppm) and temperature (degrees C) were measured in three-minute intervals over 90 minutes. The mean CO levels produced by quick-light charcoal over 90 minutes was significantly higher (3728 ± 2028) compared to natural charcoal (1730 ± 501 ppm, p = 0.016). However, the temperature was significantly greater when burning natural charcoal (292 ± 87) compared to quick-light charcoal (247 ± 92 degrees C, p = 0.013). The high levels of CO produced when using quick-light charcoals may be contributing to the increase in reported hospital admissions for severe CO poisoning.

  20. 40 CFR 454.10 - Applicability; description of the manufacture of char and charcoal briquets subcategory.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... manufacture of char and charcoal briquets subcategory. 454.10 Section 454.10 Protection of Environment... MANUFACTURING POINT SOURCE CATEGORY Char and Charcoal Briquets Subcategory § 454.10 Applicability; description of the manufacture of char and charcoal briquets subcategory. The provisions of this subpart...

  1. 40 CFR 454.10 - Applicability; description of the manufacture of char and charcoal briquets subcategory.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... manufacture of char and charcoal briquets subcategory. 454.10 Section 454.10 Protection of Environment... MANUFACTURING POINT SOURCE CATEGORY Char and Charcoal Briquets Subcategory § 454.10 Applicability; description of the manufacture of char and charcoal briquets subcategory. The provisions of this subpart...

  2. 40 CFR 454.10 - Applicability; description of the manufacture of char and charcoal briquets subcategory.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... manufacture of char and charcoal briquets subcategory. 454.10 Section 454.10 Protection of Environment... MANUFACTURING POINT SOURCE CATEGORY Char and Charcoal Briquets Subcategory § 454.10 Applicability; description of the manufacture of char and charcoal briquets subcategory. The provisions of this subpart...

  3. 40 CFR 454.10 - Applicability; description of the manufacture of char and charcoal briquets subcategory.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... manufacture of char and charcoal briquets subcategory. 454.10 Section 454.10 Protection of Environment... MANUFACTURING POINT SOURCE CATEGORY Char and Charcoal Briquets Subcategory § 454.10 Applicability; description of the manufacture of char and charcoal briquets subcategory. The provisions of this subpart...

  4. URINARY BIOMARKERS IN CHARCOAL WORKERS EXPOSED TO WOOD SMOKE IN BAHIA STATE, BRAZIL

    EPA Science Inventory

    Charcoal is an important source of energy for domestic and industrial use in many countries. In Brazil, the largest producer of charcoal in the world, approximately 350,000 workers are linked to the production and transportation of charcoal. In order to evaluate the occupationa...

  5. EMISSIONS OF AIR TOXICS FROM A SIMULATED CHARCOAL KILN EQUIPPED WITH AN AFTERBURNER

    EPA Science Inventory

    The report discusses emissions of air toxics from a simulated charcoal kiln equipped with an afterburner. A laboratory-scale simulator was constructed and tested to determine if it could be used to produce charcoal that was similar to that produced in Missouri-type charcoal kilns...

  6. RECYCLE AND REUSE OF CHARCOAL MADE FROM EXCESS SLUDGE IN MEMBRANE BIOREACTOR

    NASA Astrophysics Data System (ADS)

    Tran, Tuyet Thi; Shafiquzzaman, Md.; Nakajima, Jun

    Charcoal produced from excess sludge appeared to be useful for removing SMP (soluble microbial products) in MBR (membrane bioreactors) and therefore for reducing membrane fouling. Batch experiments and long-term MBR experiments were performed by using charcoal made of actual excess sludge. In the batch experiments, SMP was removed effectively through charcoal addition. This approach proved especially effective for the removal of carbohydrate. Charcoal would serve as an absorbent and coagulant in SMP removal. High BOD (biochemical oxygen demand) removal efficiencies produced no negative effects on biological activity in the reactors during the long-term MBR experiments involving charcoal addition. The decrease of humic substances and COD (chemical oxygen demand) through charcoal addition suggested that this approach effectively enhanced the performance of activated sludge treatment. A charcoal addition of more than 0.1% in long-term MBR experiments effectively decreased the membrane fouling frequency. The use of charcoal therefore served to mitigate membrane fouling. A decrease in carbohydrate, corresponding to the increase in the mean fouling period, suggested that a charcoal addition of more than 0.1% effectively removed SMP, especially carbohydrate. A charcoal cyclic reuse system is also proposed. This system would involve charcoal production and charcoal addition to MBR.

  7. Characterization of Basidiomycetes associated with wood rot of citrus in southern Italy.

    PubMed

    Roccotelli, Angela; Schena, Leonardo; Sanzani, Simona M; Cacciola, Santa O; Mosca, Saveria; Faedda, Roberto; Ippolito, Antonio; di San Lio, Gaetano Magnano

    2014-08-01

    The characterization of Basidiomycetes associated with wood rots in commercial citrus orchards in southern Italy revealed that both white and brown rot fungi are implicated in this disease. Fomitiporia mediterranea was the most prevalent species causing a white rot, followed by Fomitopsis sp. which, by contrast, was associated with brown rot wood decay. Furthermore, Phellinus spp. and other nonidentified basidiomycetous fungi showing genetic affinity with the genera Phellinus and Coniophora were occasionally isolated. Artificial inoculations on lemon (Citrus limon) branches showed a faster wood colonization by Fomitopsis sp. compared with F. mediterranea, indicating that the former species as a potentially serious pathogen of citrus trees. The analysis of F. mediterranea internal transcribed spacer (ITS) sequences revealed a high level of genetic variability, with 13 genotypes which were both homozygous (6 genotypes) and heterozygous (7 genotypes). The presence of heterozygous genomes based on ITS sequences has never been reported before for F. mediterranea. This, together with the high frequency of basidiomata on infected wood, unambiguously confirms the outcrossing nature of reproduction in F. mediterranea and the primary role of basidiospores in the dissemination of inoculum. Similarly, high genetic variability was observed analyzing Fomitopsis sp. Because basidiomata of this fungus have not been observed on citrus trees, it can be hypothesized that basidiospores are produced on alternative host plants.

  8. Leuconostoc spp. Associated with Root Rot in Sugar Beet and Their Interaction with Rhizoctonia solani.

    PubMed

    Strausbaugh, Carl A

    2016-05-01

    Rhizoctonia root and crown rot is an important disease problem in sugar beet caused by Rhizoctonia solani and also shown to be associated with Leuconostoc spp. Initial Leuconostoc studies were conducted with only a few isolates and the relationship of Leuconostoc with R. solani is poorly understood; therefore, a more thorough investigation was conducted. In total, 203 Leuconostoc isolates were collected from recently harvested sugar beet roots in southern Idaho and southeastern Oregon during 2010 and 2012: 88 and 85% Leuconostoc mesenteroides, 6 and 15% L. pseudomesenteroides, 2 and 0% L. kimchi, and 4 and 0% unrecognized Leuconostoc spp., respectively. Based on 16S ribosomal RNA sequencing, haplotype 11 (L. mesenteroides isolates) comprised 68 to 70% of the isolates in both years. In pathogenicity field studies with commercial sugar beet 'B-7', all Leuconostoc isolates caused more rot (P < 0.0001; α = 0.05) when combined with R. solani than when inoculated alone in both years. Also, 46 of the 52 combination treatments over the 2 years had significantly more rot (P < 0.0001; α = 0.05) than the fungal check. The data support the conclusion that a synergistic interaction leads to more rot when both Leuconostoc spp. and R. solani are present in sugar beet roots. PMID:26735061

  9. EMISSIONS FROM STREET VENDOR COOKING DEVICES (CHARCOAL GRILLING)

    EPA Science Inventory

    The report discusses a joint U.S./Mexican program to establish a reliable emissions inventory for street vendor cooking devices (charcoal grilling), a significant source of air pollutants in the Mexicali-Imperial Valley area of Mexico. Emissions from these devices, prevalent in t...

  10. The role of activated charcoal in plant tissue culture.

    PubMed

    Thomas, T Dennis

    2008-01-01

    Activated charcoal has a very fine network of pores with large inner surface area on which many substances can be adsorbed. Activated charcoal is often used in tissue culture to improve cell growth and development. It plays a critical role in micropropagation, orchid seed germination, somatic embryogenesis, anther culture, synthetic seed production, protoplast culture, rooting, stem elongation, bulb formation etc. The promotary effects of AC on morphogenesis may be mainly due to its irreversible adsorption of inhibitory compounds in the culture medium and substancially decreasing the toxic metabolites, phenolic exudation and brown exudate accumulation. In addition to this activated charcoal is involved in a number of stimulatory and inhibitory activities including the release of substances naturally present in AC which promote growth, alteration and darkening of culture media, and adsorption of vitamins, metal ions and plant growth regulators, including abscisic acid and gaseous ethylene. The effect of AC on growth regulator uptake is still unclear but some workers believe that AC may gradually release certain adsorbed products, such as nutrients and growth regulators which become available to plants. This review focuses on the various roles of activated charcoal in plant tissue culture and the recent developments in this area.

  11. Activated charcoal. (Latest citations from the Compendex database). Published Search

    SciTech Connect

    Not Available

    1993-06-01

    The bibliography contains citations concerning theoretical aspects and industrial applications of activated charcoal. Topics include adsorption capacity and mechanism studies, kinetic and thermodynamic aspects, and description and evaluation of adsorptive abilities. Applications include use in water analyses and waste treatment, air pollution control and measurement, and in nuclear facilities. (Contains a minimum of 151 citations and includes a subject term index and title list.)

  12. Activated coconut shell charcoal carbon using chemical-physical activation

    NASA Astrophysics Data System (ADS)

    Budi, Esmar; Umiatin, Nasbey, Hadi; Bintoro, Ridho Akbar; Wulandari, Futri; Erlina

    2016-02-01

    The use of activated carbon from natural material such as coconut shell charcoal as metal absorbance of the wastewater is a new trend. The activation of coconut shell charcoal carbon by using chemical-physical activation has been investigated. Coconut shell was pyrolized in kiln at temperature about 75 - 150 °C for about 6 hours in producing charcoal. The charcoal as the sample was shieved into milimeter sized granule particle and chemically activated by immersing in various concentration of HCl, H3PO4, KOH and NaOH solutions. The samples then was physically activated using horizontal furnace at 400°C for 1 hours in argon gas environment with flow rate of 200 kg/m3. The surface morphology and carbon content of activated carbon were characterized by using SEM/EDS. The result shows that the pores of activated carbon are openned wider as the chemical activator concentration is increased due to an excessive chemical attack. However, the pores tend to be closed as further increasing in chemical activator concentration due to carbon collapsing.

  13. Small Scale Charcoal Making: A Manual for Trainers.

    ERIC Educational Resources Information Center

    Karch, Ed; And Others

    This training program offers skills training in all stages of the development of technologies related to small-scale charcoal production, including the design, construction, operation, maintenance, repair, and evaluation of prototype kilns. The kiln designs are selected to be as consistent as possible with the realities of rural areas in…

  14. Comparing modelled fire dynamics with charcoal records for the Holocene

    NASA Astrophysics Data System (ADS)

    Brücher, T.; Brovkin, V.; Kloster, S.; Marlon, J. R.; Power, M. J.

    2014-04-01

    An earth system model of intermediate complexity (CLIMate and BiosphERe - CLIMBER-2) and a land surface model (JSBACH), which dynamically represent vegetation, are used to simulate natural fire dynamics through the last 8000 yr. Output variables of the fire model (burned area and fire carbon emissions) are used to compare model results with sediment-based charcoal reconstructions. Several approaches for processing model output are also tested. Charcoal data are reported in Z-scores with a base period of 8000-200 BP in order to exclude the strong anthropogenic forcing of fire during the last two centuries. The model-data comparison reveals a robust correspondence in fire activity for most regions considered, while for a few regions, such as Europe, simulated and observed fire histories show different trends. The difference between modelled and observed fire activity may be due to the absence of anthropogenic forcing (e.g. human ignitions and suppression) in the model simulations, and also due to limitations inherent to modelling fire dynamics. The use of spatial averaging (or Z-score processing) of model output did not change the directions of the trends. However, Z-score-transformed model output resulted in higher rank correlations with the charcoal Z-scores in most regions. Therefore, while both metrics are useful, processing model output as Z-scores is preferable to areal averaging when comparing model results to transformed charcoal records.

  15. Comparing modelled fire dynamics with charcoal records for the Holocene

    NASA Astrophysics Data System (ADS)

    Brücher, T.; Brovkin, V.; Kloster, S.; Marlon, J. R.; Power, M. J.

    2013-11-01

    An Earth System model of intermediate complexity, CLIMBER-2, and a land surface model JSBACH that represents vegetation dynamically are used to simulate natural fire dynamics through the last 8000 yr. Output variables of the fire model (burned area and fire carbon emissions) are used to compare model results with sediment-based charcoal reconstructions and several approaches of model output processing are tested. Charcoal data are reported in Z-scores and have been used for the period 8000 to 200 BP to exclude the post-Industrial period of strong anthropogenic forcing during the last two centuries. The model-data comparison reveals a robust correspondence in fire trends for most regions considered, while few regions, such as Europe, display different trends between simulated and observed trends. The difference between the modelled and observed fire activity could be linked to an absence of the anthropogenic forcing (e.g., human ignitions and suppression) in the model simulations, but also related to limitations of model assumptions for modelling fire dynamics. For the model trends, the usage of spatial averaging or Z-score processing of model output resulted in similar directions of trend. However, modelled Z-scores resulted in higher rank correlations with the charcoal Z-scores in most of the regions. Therefore, while both metrics are useful, the Z-score processing is more preferable for the modelled fire comparison with the charcoal records than the areal averaging.

  16. Identifying quantitative trait loci for resistance to Sclerotinia head rot in two USDA sunflower germplasms.

    PubMed

    Yue, B; Radi, S A; Vick, B A; Cai, X; Tang, S; Knapp, S J; Gulya, T J; Miller, J F; Hu, J

    2008-08-01

    Sclerotinia head rot is a major disease of sunflower in the world, and quantitative trait loci (QTL) mapping could facilitate understanding of the genetic basis of head rot resistance and breeding in sunflower. One hundred twenty-three F2:3 and F2:4 families from a cross between HA 441 and RHA 439 were studied. The mapping population was evaluated for disease resistance in three field experiments in a randomized complete block design with two replicates. Disease incidence (DI) and disease severity (DS) were assessed. A genetic map with 180 target region amplification polymorphism, 32 simple sequence repeats, 11 insertion-deletion, and 2 morphological markers was constructed. Nine DI and seven DS QTL were identified with each QTL explaining 8.4 to 34.5% of phenotypic variance, suggesting the polygenic basis of the resistance to head rot. Five of these QTL were identified in more than one experiment, and each QTL explained more than 12.9% of phenotypic variance. These QTL could be useful in sunflower breeding. Although a positive correlation existed between the two disease indices, most of the respective QTL were located in different chromosomal regions, suggesting a different genetic basis for the two indices. PMID:18943211

  17. Fire history reconstruction in grassland ecosystems: amount of charcoal reflects local area burned

    NASA Astrophysics Data System (ADS)

    Leys, Bérangère; Brewer, Simon C.; McConaghy, Scott; Mueller, Joshua; McLauchlan, Kendra K.

    2015-11-01

    Fire is one of the most prevalent disturbances in the Earth system, and its past characteristics can be reconstructed using charcoal particles preserved in depositional environments. Although researchers know that fires produce charcoal particles, interpretation of the quantity or composition of charcoal particles in terms of fire source remains poorly understood. In this study, we used a unique four-year dataset of charcoal deposited in traps from a native tallgrass prairie in mid-North America to test which environmental factors were linked to charcoal measurements on three spatial scales. We investigated small and large charcoal particles commonly used as a proxy of fire activity at different spatial scales, and charcoal morphotypes representing different types of fuel. We found that small (125-250 μm) and large (250 μm-1 mm) particles of charcoal are well-correlated (Spearman correlation = 0.88) and likely reflect the same spatial scale of fire activity in a system with both herbaceous and woody fuels. There was no significant relationship between charcoal pieces and fire parameters <500 m from the traps. Moreover, local area burned (<5 km distance radius from traps) explained the total charcoal amount, and regional burning (200 km radius distance from traps) explained the ratio of non arboreal to total charcoal (NA/T ratio). Charcoal variables, including total charcoal count and NA/T ratio, did not correlate with other fire parameters, vegetation cover, landscape, or climate variables. Thus, in long-term studies that involve fire history reconstructions, total charcoal particles, even of a small size (125-250 μm), could be an indicator of local area burned. Further studies may determine relationships among amount of charcoal recorded, fire intensity, vegetation cover, and climatic parameters.

  18. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR

    SciTech Connect

    D`Souza, T.M.; Boominathan, K.; Reddy, C.A.

    1996-10-01

    Degenerate primers corresponding to the consensus sequences of the copper-binding regions in the N-terminal domains of known basidiomycete laccases were used to isolate laccase gene-specific sequences from strains representing nine genera of wood rot fungi. All except three gave the expected PCR product of about 200 bp. Computer searches of the databases identified the sequences of each of the PCR product of about 200 bp. Computer searches of the databases identified the sequence of each of the PCR products analyzed as a laccase gene sequence, suggesting the specificity of the primers. PCR products of the white rot fungi Ganoderma lucidum, Phlebia brevispora, and Trametes versicolor showed 65 to 74% nucleotide sequence similarity to each other; the similarity in deduced amino acid sequences was 83 to 91%. The PCR products of Lentinula edodes and Lentinus tigrinus, on the other hand, showed relatively low nucleotide and amino acid similarities (58 to 64 and 62 to 81%, respectively); however, these similarities were still much higher than when compared with the corresponding regions in the laccases of the ascomycete fungi Aspergillus nidulans and Neurospora crassa. A few of the white rot fungi, as well as Gloeophyllum trabeum, a brown rot fungus, gave a 144-bp PCR fragment which had a nucleotide sequence similarity of 60 to 71%. Demonstration of laccase activity in G. trabeum and several other brown rot fungi was of particular interest because these organisms were not previously shown to produce laccases. 36 refs., 6 figs., 2 tabs.

  19. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR.

    PubMed

    D'Souza, T M; Boominathan, K; Reddy, C A

    1996-10-01

    Degenerate primers corresponding to the consensus sequences of the copper-binding regions in the N-terminal domains of known basidiomycete laccases were used to isolate laccase gene-specific sequences from strains representing nine genera of wood rot fungi. All except three gave the expected PCR product of about 200 bp. Computer searches of the databases identified the sequence of each of the PCR products analyzed as a laccase gene sequence, suggesting the specificity of the primers. PCR products of the white rot fungi Ganoderma lucidum, Phlebia brevispora, and Trametes versicolor showed 65 to 74% nucleotide sequence similarity to each other; the similarity in deduced amino acid sequences was 83 to 91%. The PCR products of Lentinula edodes and Lentinus tigrinus, on the other hand, showed relatively low nucleotide and amino acid similarities (58 to 64 and 62 to 81%, respectively); however, these similarities were still much higher than when compared with the corresponding regions in the laccases of the ascomycete fungi Aspergillus nidulans and Neurospora crassa. A few of the white rot fungi, as well as Gloeophyllum trabeum, a brown rot fungus, gave a 144-bp PCR fragment which had a nucleotide sequence similarity of 60 to 71%. Demonstration of laccase activity in G. trabeum and several other brown rot fungi was of particular interest because these organisms were not previously shown to produce laccases. PMID:8837429

  20. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR.

    PubMed Central

    D'Souza, T M; Boominathan, K; Reddy, C A

    1996-01-01

    Degenerate primers corresponding to the consensus sequences of the copper-binding regions in the N-terminal domains of known basidiomycete laccases were used to isolate laccase gene-specific sequences from strains representing nine genera of wood rot fungi. All except three gave the expected PCR product of about 200 bp. Computer searches of the databases identified the sequence of each of the PCR products analyzed as a laccase gene sequence, suggesting the specificity of the primers. PCR products of the white rot fungi Ganoderma lucidum, Phlebia brevispora, and Trametes versicolor showed 65 to 74% nucleotide sequence similarity to each other; the similarity in deduced amino acid sequences was 83 to 91%. The PCR products of Lentinula edodes and Lentinus tigrinus, on the other hand, showed relatively low nucleotide and amino acid similarities (58 to 64 and 62 to 81%, respectively); however, these similarities were still much higher than when compared with the corresponding regions in the laccases of the ascomycete fungi Aspergillus nidulans and Neurospora crassa. A few of the white rot fungi, as well as Gloeophyllum trabeum, a brown rot fungus, gave a 144-bp PCR fragment which had a nucleotide sequence similarity of 60 to 71%. Demonstration of laccase activity in G. trabeum and several other brown rot fungi was of particular interest because these organisms were not previously shown to produce laccases. PMID:8837429

  1. Synthetic dye decolourization by white rot fungi.

    PubMed

    Murugesan, K; Kalaichelvan, P T

    2003-09-01

    Synthetic dyes are integral part of many industrial products. The effluents generated from textile dyeing units create major environmental problems and issues both in public and textile units. Industrial wastewater treatment is one of the major problems in the present scenario. Though, the physical and chemical methods offer some solutions to the problems, it is not affordable by the unit operators. Biological degradation is recognized as the most effective method for degrading the dye present in the waste. Research over a period of two decades had provided insight into the various aspects of biological degradation of dyes. It is observed that the white rot fungi have a non-specific enzyme system, which oxidizes the recalcitrant dyes. Detailed and extensive studies have been made and process developed for treatment of dye containing wastewaters by white rot fungi and their enzyme systems. An attempt is made to summarize the detailed research contributions on these lines.

  2. SWEET PEPPER: ASPECTS OF THE BIOLOGY AND CONTROL OF FUSARIUM FRUIT ROT.

    PubMed

    O'Neill, T; Mayne, S

    2015-01-01

    Internal fruit rot of sweet pepper grown in glasshouses has been an increasing problem worldwide since around 2000. In the UK, surveys in 2007 showed infected fruits were present in many crops at levels from 1 to 37%. The disease causes some losses on production nurseries but more importantly also causes rejection by packers and complaints by supermarkets. Losses vary greatly between crops and seasons, and growers are generally unaware a problem may be present until harvest or postharvest. The fruit rot arises through infection of flowers (Yang et al., 2010). Several Fusarium species have been associated with the disease in the UK, notably F. lactis and F. oxysporum. Observations in commercial crops indicate the disease is favoured by high humidity. At present there is no effective method of control. This experimental work aimed to reduce losses to Fusarium internal fruit rot through increased knowledge of factors associated with a high incidence of the disease and use of biofungicides and fungicides to control flower infection.

  3. Biological Control of Apple Ring Rot on Fruit by Bacillus amyloliquefaciens 9001.

    PubMed

    Li, Yan; Han, Li-Rong; Zhang, Yuanyuan; Fu, Xuechi; Chen, Xinyi; Zhang, Lixia; Mei, Ruhong; Wang, Qi

    2013-06-01

    Apple ring rot disease, caused by Botryosphaeria dothidea (Moug. ex. Fr) Ces. et de Not., is one of the most important diseases on apple fruits. In this study, strain 9001 isolated from healthy apple fruits from an infested orchard was evaluated for its biocontrol activity against apple ring rot in vitro and in vivo. Strain 9001 showed obvious antagonistic activity to B. dothidea YL-1 when plated on potato dextrose agar. Soaking healthy apples in the bacterial suspensions of strain 9001 prior to artificial inoculation of fungal pathogen resulted in a dramatic decrease in disease incidence when compared to the control. Moreover, either field application in the growth season or postharvest treatment of apples from infected orchards with bacterial suspensions of strain 9001 resulted in significantly reduced disease incidence within the storage period for 4 months at room temperature. Based on the phylogenetic analysis of 16S rRNA and the gyrA gene, strain 9001 was identified as Bacillus amyloliquefaciens. These results indicated that B. amyloliquefaciens 9001 could be a promising agent in biocontrol of apple ring rot on fruit, which might help to minimize the yield loss of apple fruit during the long postharvest period.

  4. Wood-rotting fungi of North America

    SciTech Connect

    Gilbertson, R.L.

    1980-01-01

    The biology of wood-rotting fungi is reviewed. Discussions are presented in taxonomy, species diversity, North American distribution, developmental response to environmental factors, edibility and toxicity, medical uses, relationships of fungi with insects and birds, the role of fungi as mycorrhiza, pathological relationships with trees, role in wood decay, and ecology. Threats to the continuing existence of these fungi as a result of increased utilization of wood as fuel are also discussed. (ACR)

  5. Microorganism communities and chemical characteristics in sludge-bamboo charcoal composting system.

    PubMed

    Hua, Li; Chen, Yingxu; Wu, Weixiang; Ma, Hongrui

    2011-04-01

    Microorganism communities and chemical characteristics in sludge-bamboo charcoal composting system were investigated to find the effect of bamboo charcoal on composting. According to a plate count test, abundances of bacteria, fungi and actinomycetes in the treatment with bamboo charcoal were several times higher than those in treatment without bamboo charcoal. In addition, terminal restriction fragment length polymorphism (TRFLP) analysis indicated that the bacterial community diversity in treatment with bamboo charcoal was greater than that of the control. Both results demonstrated that amendment with bamboo charcoal can increase microorganism population and microorganism community diversity in a sludge composting system. Moreover, the results of FTIR spectroscopy disclosed that aerobic composting can promote the formation of surface acid groups on bamboo charcoal. These surface acid groups may deprotonate and react with NH4+ to form stable complexes. Therefore, the increase of functional groups accompanied with greater assimilation of nitrogen by microorganisms could reduce nitrogen loss in sludge composting.

  6. Fusarium species from the cassava root rot complex in west Africa.

    PubMed

    Bandyopadhyay, Ranajit; Mwangi, Maina; Aigbe, Sylvester O; Leslie, John F

    2006-06-01

    ABSTRACT Fusarium species are a significant component of the set of fungi associated with cassava root rot. Yield losses due to root rot average 0.5 to 1 ton/ha but losses >3 ton/ha, an equivalent of 15 to 20% yield, often occur. This paper reviews previous work on cassava root rot and summarizes a few recent studies on Fusarium species associated with the disease. Our studies in Cameroon showed that 30% of rotted tubers were infected by Fusarium spp. 12 months after planting and represented 25% of all the fungal isolates recovered. Other commonly recovered fungi were Botryodiplodia theobromae and Armillaria spp. Numerous and diverse species of Fusarium were associated with rotted cassava roots in Nigeria and Cameroon. At least 13 distinct amplified fragment length polymorphism (AFLP) groups of Fusarium were distinguishable, each group probably a distinct species, and many of them might represent previously undescribed Fusarium species. The two largest of the AFLP groups correspond to F. oxysporum and F. solani species complex. The distribution of Fusarium spp. varied among countries and among locations within a country, suggesting that germ plasm resistant at one location may not be resistant at another. Fusarium spp. also cause seedling blight of cassava and can be recovered from the stems of infected plants up to 1 m above the ground. Therefore, the pathogen can spread with stems cut as planting material. Fusarium spp. also can colonize Chromolaena odorata, the dominant weed in short fallows, which could further complicate management efforts by serving as an alternative host for strains that colonize cassava.

  7. Susceptibility of Maize to Stalk Rot Caused by Fusarium graminearum Deoxynivalenol and Zearalenone Mutants.

    PubMed

    Quesada-Ocampo, L M; Al-Haddad, J; Scruggs, A C; Buell, C R; Trail, F

    2016-08-01

    Fusarium graminearum is a destructive pathogen of cereals that can cause stalk rot in maize. Stalk rot results in yield losses due to impaired grain filling, premature senescence, and lodging, which limits production and harvesting of ears. In addition, mycotoxins can make infected tissues unfit for silage. Our objectives were to evaluate the natural variation in stalk rot resistance among maize inbreds, to establish whether deoxynivalenol (DON)- and zearalenone (ZEA)-deficient strains are pathogenic on a panel of diverse inbreds, and to quantify the accumulation of DON in infected stalk tissue. Wild-type F. graminearum and mycotoxin mutants (DON and ZEA) were used to separately inoculate stalks of 9-week-old plants of 20 inbreds in the greenhouse. Plants were evaluated for lesion area at the inoculation point at 0, 2, 14, and 28 days postinoculation and tissues around lesions were sampled to determine the DON content. Regardless of their ability to produce DON or ZEA, all tested F. graminearum strains caused stalk rot; however, significant differences in disease levels were detected. Among the tested inbreds, Mp717 was resistant to all three F. graminearum strains while Mp317 and HP301 were only partially resistant. Accumulation of DON was significantly lower in infected stalks of the resistant and partially resistant inbreds than the susceptible inbreds. Analysis of the 20 inbreds using data from 17 simple-sequence repeats revealed population structure among the individuals; however, there was no association between genetic clustering and stalk rot resistance. These findings are an additional step toward breeding maize inbreds suitable for planting in fields infested with F. graminearum.

  8. Rot is a key regulator of Staphylococcus aureus biofilm formation

    PubMed Central

    Mootz, Joe M.; Benson, Meredith A.; Heim, Cortney E.; Crosby, Heidi A.; Kavanaugh, Jeffrey S.; Dunman, Paul M.; Kielian, Tammy; Torres, Victor J.; Horswill, Alexander R.

    2015-01-01

    AUTHOR SUMMARY Staphylococcus aureus is a significant cause of chronic biofilm infections on medical implants. We investigated the biofilm regulatory cascade and discovered that the repressor of toxins (Rot) is part of this pathway. A USA300 community-associated methicillin-resistant S. aureus (CA-MRSA) strain deficient in Rot was unable to form a biofilm using multiple different assays, and we found rot mutants in other strain lineages were also biofilm deficient. By performing a global analysis of transcripts and protein production controlled by Rot, we observed that all the secreted protease genes were upregulated in a rot mutant, and we hypothesized that this regulation could be responsible for the biofilm phenotype. To investigate this question, we determined that Rot bound to the protease promoters, and we observed that activity levels of these enzymes, in particular the cysteine proteases, were increased in a rot mutant. By inactivating these proteases, biofilm capacity was restored to the mutant, demonstrating they are responsible for the biofilm negative phenotype. Finally, we tested the rot mutant in a mouse catheter model of biofilm infection and observed a significant reduction in biofilm burden. Thus S. aureus uses the transcription factor Rot to repress secreted protease levels in order to build a biofilm. PMID:25612137

  9. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.

    PubMed

    Riley, Robert; Salamov, Asaf A; Brown, Daren W; Nagy, Laszlo G; Floudas, Dimitrios; Held, Benjamin W; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika A; Sun, Hui; LaButti, Kurt M; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E; Pisabarro, Antonio G; Walton, Jonathan D; Blanchette, Robert A; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David S; Grigoriev, Igor V

    2014-07-01

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood-decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white-rot/brown-rot classification paradigm, we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically informed principal-components analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white-rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown-rot fungi. Our results suggest a continuum rather than a dichotomy between the white-rot and brown-rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay.

  10. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/ brown rot paradigm for wood decay fungi

    SciTech Connect

    Riley, Robert; Salamov, Asaf; Brown, Daren W.; Nagy, Laszlo G.; Floudas, Dimitris; Held, Benjamin; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika; Sun, Hui; LaButti, Kurt; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E.; Pisabarro, Antonio; Walton, Jonathan D.; Blanchette, Robert; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David; Grigoriev, Igor V.

    2014-03-14

    Basidiomycota (basidiomycetes) make up 32percent of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white rot/brown rot classification paradigm we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically-informed Principal Components Analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs, but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown rot fungi. Our results suggest a continuum rather than a dichotomy between the white rot and brown rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay.

  11. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

    PubMed Central

    Riley, Robert; Salamov, Asaf A.; Brown, Daren W.; Nagy, Laszlo G.; Floudas, Dimitrios; Held, Benjamin W.; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika A.; Sun, Hui; LaButti, Kurt M.; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E.; Pisabarro, Antonio G.; Walton, Jonathan D.; Blanchette, Robert A.; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David S.; Grigoriev, Igor V.

    2014-01-01

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood-decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white-rot/brown-rot classification paradigm, we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically informed principal-components analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white-rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown-rot fungi. Our results suggest a continuum rather than a dichotomy between the white-rot and brown-rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay. PMID:24958869

  12. Detection, identification and differentiation of Pectobacterium and Dickeya species causing potato blackleg and tuber soft rot: a review

    PubMed Central

    Czajkowski, R; Pérombelon, MCM; Jafra, S; Lojkowska, E; Potrykus, M; van der Wolf, JM; Sledz, W

    2015-01-01

    The soft rot Enterobacteriaceae (SRE) Pectobacterium and Dickeya species (formerly classified as pectinolytic Erwinia spp.) cause important diseases on potato and other arable and horticultural crops. They may affect the growing potato plant causing blackleg and are responsible for tuber soft rot in storage thereby reducing yield and quality. Efficient and cost-effective detection and identification methods are essential to investigate the ecology and pathogenesis of the SRE as well as in seed certification programmes. The aim of this review was to collect all existing information on methods available for SRE detection. The review reports on the sampling and preparation of plant material for testing and on over thirty methods to detect, identify and differentiate the soft rot and blackleg causing bacteria to species and subspecies level. These include methods based on biochemical characters, serology, molecular techniques which rely on DNA sequence amplification as well as several less-investigated ones. PMID:25684775

  13. Oral iodinated activated charcoal improves lung function in patients with COPD.

    PubMed

    Skogvall, Staffan; Erjefält, Jonas S; Olin, Anders I; Ankerst, Jaro; Bjermer, Leif

    2014-06-01

    The effect of 8 weeks treatment with oral iodinated activated charcoal (IAC) on lung function of patients with moderate chronic obstructive pulmonary disease (COPD) was examined in a double blind randomized placebo controlled parallel group study with 40 patients. In the IAC group, patients showed a statistically significant improvement of FEV1 baseline by 130 ml compared to placebo, corresponding to 8.2% improvement (p = 0.031*). Correlation statistics revealed that the improvement of FEV1 baseline was significantly correlated both to FEV1 post-bronchodilator (p = 0.0020**) and FEV1 post-exercise (0.033*) values. This demonstrates that the improved baseline lung function by IAC did not inhibit a further beta2-adrenoceptor relaxation, and thus that patients did not reach a limit for maximal improvement of the lung function after IAC treatment. Eight patients in the IAC group developed abnormal thyroid hormone levels transiently during the treatment. This side effect was not correlated to improvement of lung function (p = 0.82). No serious adverse effects directly related to the treatment were recorded. In summary, this study demonstrates that iodinated activated charcoal surprisingly and significantly improved lung function of patients with moderate COPD. The underlying mechanism of action is unclear, but is likely to be different from the drugs used today. The immediate conclusion is that further studies are now justified in order to determine clinical efficacy of IAC in COPD and explore possible mechanisms of action.

  14. The effect of activated charcoal on adenine-induced chronic renal failure in rats.

    PubMed

    Ali, Badreldin H; Alza'abi, Mohamed; Ramkumar, Aishwarya; Al-Lawati, Intisar; Waly, Mostafa I; Beegam, Sumaya; Nemmar, Abderrahim; Brand, Susanne; Schupp, Nicole

    2014-03-01

    Activated charcoal (AC) is a sorbent that has been shown to remove urinary toxins like urea and indoxyl sulfate. Here, the influence of AC on kidney function of rats with experimental chronic renal failure (CRF) is investigated. CRF was induced in rats by feeding adenine (0.75%) for four weeks. As an intervention, AC was added to the feed at concentrations of 10%, 15% or 20%. Adenine treatment impaired kidney function: it lowered creatinine clearance and increased plasma concentrations of creatinine, urea, neutrophil gelatinase-associated lipocalin and vanin-1. Furthermore, it raised plasma concentrations of the uremic toxins indoxyl sulfate, phosphate and uric acid. Renal morphology was severely damaged and histopathological markers of inflammation and fibrosis were especially increased. In renal homogenates, antioxidant indices, including superoxide dismutase and catalase activity, total antioxidant capacity and reduced glutathione were adversely affected. Most of these changes were significantly ameliorated by dietary administration of AC at a concentration of 20%, while effects induced by lower doses of dietary AC on adenine nephrotoxicity were not statistically significant. The results suggest that charcoal is a useful sorbent agent in dietary adenine-induced CRF in rats and that its usability as a nephroprotective agent in human kidney disease should be studied.

  15. The prevalence of different strains of Rhizoctonia solani associated with Rhizoctonia crown and root rot symptoms in Ontario sugarbeet fields

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rhizoctonia crown and root rot (RCRR) [Rhizoctonia solani Kühn] is an important disease of sugarbeets in southwestern Ontario, Canada. A survey of commercial sugarbeet fields was completed in 2010 and 2011 to determine the range of R. solani anastomosis groups (AGs) and inter-specific groups (ISGs) ...

  16. Pre- and post-harvest development of Phytophthora fruit rot on watermelons treated with fungicides in the field

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fruit rot, caused by Phytophthora capsici, is a serious disease in most watermelon producing regions in southeastern U.S., and has caused devastating loss over the past few years. In many instances, severe losses occurred after harvest during transportation. Experiments were conducted in 2010, 201...

  17. Screening a dry bean Andean diversity panel for potential sources of resistance to Rhizoctonia root rot and damping-off

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Rhizoctonia root rot and damping-off, caused by Rhizoctonia solani, are among the most economically important root and hypocotyl diseases in the world and affect a wide range of hosts including the common bean (Phaseolus vulgaris). To identify potential sources of resistance, screening material was ...

  18. Wilt, crown, and root rot of common rose mallow (Hibiscus moscheutos) caused by a novel Fusarium sp.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A new crown and root rot disease of landscape plantings of the malvaceous ornamental common rose mallow (Hibiscus moscheutos) was first detected in Washington State in 2012. The main objectives of this study were to identify the causal agent using multilocus molecular phylogenetics and to complete K...

  19. SNP discovery and QTL mapping of Sclerotinia basal stalk rot resistance in sunflower using genotyping-by-sequencing (GBS)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Basal stalk rot (BSR) caused by the ascomycete fungus Sclerotinia sclerotiorum (Lib.) de Bary is a serious disease of sunflower (Helianthus annuus L.) in the cool and humid production areas of the world. Quantitative trait loci (QTL) for BSR resistance were identified in a sunflower recombinant inbr...

  20. Characterization of a brown rot fungus isolated from dwarf flowering almond in Korea.

    PubMed

    Shim, Myoung Yong; Jeon, Young Jae; Kim, Seong Hwan

    2007-03-01

    The fruits showing brown rot symptom on dwarf flowering almond were found in Gongju, Chungchungnam-Do in Korea in July 2005. Small water-soaked lesions on the fruits were initiated, and gradually developed to soft rot covered with gray conidia. Then the diseased fruits were shrunk and became grayish-black mummies. A fungus was isolated from the diseased fruit and its morphological, cultural and molecular genetic characteristics were investigated. Typical blastospores of Monilinia spp. were observed under a light microscope both from tissues of the diseased fruits and from PDA-grown cultures. The fungus grew well at 25℃ and on PDA. The ITS ribosomal DNA region (650 bp) of the fungus was amplified by PCR and analyzed. Comparative data on ITS sequence homology among Monilinia spp., ITS sequence-based phylogram and morphological characteristics showed that the fungus is Monilinia fructicola. This is the first report on Monilinia fructicola causing brown rot on fruits of dwarf flowering almond in Korea.

  1. Characterization of a Brown Rot Fungus Isolated from Dwarf Flowering Almond in Korea

    PubMed Central

    Shim, Myoung Yong; Jeon, Young Jae

    2007-01-01

    The fruits showing brown rot symptom on dwarf flowering almond were found in Gongju, Chungchungnam-Do in Korea in July 2005. Small water-soaked lesions on the fruits were initiated, and gradually developed to soft rot covered with gray conidia. Then the diseased fruits were shrunk and became grayish-black mummies. A fungus was isolated from the diseased fruit and its morphological, cultural and molecular genetic characteristics were investigated. Typical blastospores of Monilinia spp. were observed under a light microscope both from tissues of the diseased fruits and from PDA-grown cultures. The fungus grew well at 25℃ and on PDA. The ITS ribosomal DNA region (650 bp) of the fungus was amplified by PCR and analyzed. Comparative data on ITS sequence homology among Monilinia spp., ITS sequence-based phylogram and morphological characteristics showed that the fungus is Monilinia fructicola. This is the first report on Monilinia fructicola causing brown rot on fruits of dwarf flowering almond in Korea. PMID:24015065

  2. Modelling the combustion of charcoal in a model blast furnace

    NASA Astrophysics Data System (ADS)

    Shen, Yansong; Shiozawa, Tomo; Yu, Aibing; Austin, Peter

    2013-07-01

    The pulverized charcoal (PCH) combustion in ironmaking blast furnaces is abstracting remarkable attention due to various benefits such as lowering CO2 emission. In this study, a three-dimensional CFD model is used to simulate the flow and thermo-chemical behaviours in this process. The model is validated against the experimental results from a pilot-scale combustion test rig for a range of conditions. The typical flow and thermo-chemical phenomena is simulated. The effect of charcoal type, i.e. VM content is examined, showing that the burnout increases with VM content in a linear relationship. This model provides an effective way for designing and optimizing PCH operation in blast furnace practice.

  3. Charcoal analysis and Holocene vegetation history in southern Syria

    NASA Astrophysics Data System (ADS)

    Willcox, George

    1999-04-01

    Charcoal analysis of three archaeological sites in southern Syria in the vicinity of the Jebel al Arab (formerly Jebel Druze) indicates that during the Early Bronze Age an association consisting predominately of Pistacia, deciduous oak and almond was exploited. During the Middle Bronze Age these taxa diminish and are partially replaced by more steppic species or introduced wood such as olive. During the Roman period evergreen oak appeared in the region and gradually replaced the deciduous oak which is now restricted to a small area. The gradual replacement of deciduous oaks by evergreen oaks has been observed in other areas of the Mediterranean basin during the Holocene. Conifer charcoal such as pine and cedar is present on the sites, but it is not clear whether these were local or imported from farther away, for example, the Lebanese highlands. During the Middle Bronze Age olive wood was also used as combustible but here also its exact origin is not known.

  4. Comparing modelled fire dynamics with charcoal records for the Holocene

    NASA Astrophysics Data System (ADS)

    Brücher, Tim; Brovkin, Victor; Kloster, Silvia; Marlon, Jennifer; Power, Mitch

    2014-05-01

    An Earth System model of intermediate complexity, CLIMBER-2, and land surface model JSBACH that includes dynamic vegetation, carbon cycle, and fire regime are used for simulation of natural fire dynamics through the last 8,000 years. To compare the fire model results with the charcoal reconstructions, several output variables of the fire model (burned area, carbon emissions) and several approaches of model output processing are tested. The z-scores out of charcoal dataset have been calculated for the period 8,000 to 200 BP to exclude a period of strong anthropogenic forcing during the last two centuries. The model analysis points mainly to an increasing fire activity during the Holocene for most of the investigated areas, which is in good correspondence to reconstructed fire trends out of charcoal data for most of the tested regions, while for few regions such as Europe the simulated trend and the reconstructed trends are different. The difference between the modeled and reconstructed fire activity could be due to absence of the anthropogenic forcing in the model simulations, but also due to limitations of model assumptions for modeling fire dynamics. For the model trends, the usage of averaging or z-score processing of model output resulted in similar directions of trend. Therefore, the approach of fire model output processing does not effect results of the model-data comparison. Global fire modeling is still in its infancy; improving our representations of fire through validation exercises such as what we present here is thus essential before testing hypotheses about the effects of extreme climate changes on fire behavior and potential feedbacks that result from those changes. Brücher, T., Brovkin, V., Kloster, S., Marlon, J. R., and Power, M. J.: Comparing modelled fire dynamics with charcoal records for the Holocene, Clim. Past Discuss., 9, 6429-6458, doi:10.5194/cpd-9-6429-2013, 2013.

  5. Trichoderma viride induces pathogenesis related defense response against rot pathogen infection in groundnut (Arachis hypogaea L.).

    PubMed

    Gajera, H P; Savaliya, Disha D; Patel, S V; Golakiya, B A

    2015-08-01

    The study examine induction of defense enzymes involved in phenylpropanoid pathway and accumulation of pathogenesis related proteins in rot pathogen (Aspergillus niger Van Tieghem) challenged groundnut seedlings in response to Trichoderma viride JAU60. Seeds of five groundnut varieties differing in collar rot susceptibility were sown under non-infested, pathogen infested and pathogen+T. viride JAU60 seed treatment. Collar rot disease evident between 31.0% (J-11, GG-2) and 67.4% (GG-20) in different groundnut varieties under pathogen infested which was significantly reduced from 58.1% (J-11, GG-2) to 51.6% (GG-20) by Trichoderma treatment. The specific activities of polyphenol oxidase (EC 1.14.18.1) and β-1,3 glucanase (EC 3.2.1.6) elevated 3.5 and 2.3-fold, respectively, at 3 days; phenylalanine ammonia lyase (EC 4.3.1.5) evident 1.6-fold higher at 6 days; and chitinase (EC 3.2.1.14) sustained 2.3-2.8 folds up to 9 days in Trichoderma treated+pathogen infested seedlings of tolerant varieties (J-11, GG-2) compared with moderate and susceptible (GAUG-10, GG-13, GG-20). T. viride JAU60 induces defense enzymes in a different way for tolerant and susceptible varieties to combat the disease. This study indicates the synergism activation of defense enzymes under the pathogenic conditions or induced resistance by T. viride JAU60 in a different groundnut varieties susceptible to collar rot disease. PMID:26160540

  6. [Effects of bamboo charcoal on the growth of Trifolium repens and soil bacterial community structure].

    PubMed

    Li, Song-Hao; He, Dong-Hua; Shen, Qiu-Lan; Xu, Qiu-Fang

    2014-08-01

    The effects of addition rates (0, 3% and 9%) and particle sizes (0.05, 0.05-1.0 and 1.0-2.0 mm) of bamboo charcoal on the growth of Trifolium repens and soil microbial community structure were investigated. The results showed that bamboo charcoal addition greatly promoted the early growth of T. repens, with the 9% charcoal addition rate being slightly better than the 3% charcoal addition rate. The effects of different particle sizes of bamboo charcoal on the growth of T. repens were not different significantly. Growth promotion declined with time during 120 days after sowing, and disappeared completely after 5 months. DGGE analysis of the bacterial 16S rDNA V3 fragment indicated that bamboo charcoal altered the soil bacterial community structure. The amount and Shannon diversity index of bacteria in the bamboo charcoal addition treatments increased compared with CK. The quantitative analysis showed that the amount of bacteria in the treatment with bamboo charcoal of fine particle (D < 0.05 mm) at the 9% addition rate was significantly higher than in the other treatments. The fine bamboo charcoal had a great effect on soil bacteria amount compared with the charcoal of other sizes at the same addition rate.

  7. The impact of media reporting on the emergence of charcoal burning suicide in Taiwan.

    PubMed

    Chen, Ying-Yeh; Chen, Feng; Gunnell, David; Yip, Paul S F

    2013-01-01

    We investigated the association of the intensity of newspaper reporting of charcoal burning suicide with the incidence of such deaths in Taiwan during 1998-2002. A counting process approach was used to estimate the incidence of suicides and intensity of news reporting. Conditional Poisson generalized linear autoregressive models were performed to assess the association of the intensity of newspaper reporting of charcoal burning and non-charcoal burning suicides with the actual number of charcoal burning and non-charcoal burning suicides the following day. We found that increases in the reporting of charcoal burning suicide were associated with increases in the incidence of charcoal burning suicide on the following day, with each reported charcoal burning news item being associated with a 16% increase in next day charcoal burning suicide (p<.0001). However, the reporting of other methods of suicide was not related to their incidence. We conclude that extensive media reporting of charcoal burning suicides appears to have contributed to the rapid rise in the incidence of the novel method in Taiwan during the initial stage of the suicide epidemic. Regulating media reporting of novel suicide methods may prevent an epidemic spread of such new methods.

  8. The Impact of Media Reporting on the Emergence of Charcoal Burning Suicide in Taiwan

    PubMed Central

    Chen, Ying-Yeh; Chen, Feng; Gunnell, David; Yip, Paul S. F.

    2013-01-01

    We investigated the association of the intensity of newspaper reporting of charcoal burning suicide with the incidence of such deaths in Taiwan during 1998–2002. A counting process approach was used to estimate the incidence of suicides and intensity of news reporting. Conditional Poisson generalized linear autoregressive models were performed to assess the association of the intensity of newspaper reporting of charcoal burning and non-charcoal burning suicides with the actual number of charcoal burning and non-charcoal burning suicides the following day. We found that increases in the reporting of charcoal burning suicide were associated with increases in the incidence of charcoal burning suicide on the following day, with each reported charcoal burning news item being associated with a 16% increase in next day charcoal burning suicide (p<.0001). However, the reporting of other methods of suicide was not related to their incidence. We conclude that extensive media reporting of charcoal burning suicides appears to have contributed to the rapid rise in the incidence of the novel method in Taiwan during the initial stage of the suicide epidemic. Regulating media reporting of novel suicide methods may prevent an epidemic spread of such new methods. PMID:23383027

  9. Variability in oxidative degradation of charcoal: Influence of production conditions and environmental exposure

    NASA Astrophysics Data System (ADS)

    Ascough, P. L.; Bird, M. I.; Francis, S. M.; Thornton, B.; Midwood, A. J.; Scott, A. C.; Apperley, D.

    2011-05-01

    Charcoal is a key component of the Black Carbon (BC) continuum, where BC is characterized as a recalcitrant, fire-derived, polyaromatic material. Charcoal is an important source of palaeoenvironmental data, and of great interest as a potential carbon sink, due to its high apparent environmental stability. However, at least some forms of charcoal are clearly susceptible to environmental alteration and degradation over relatively short timescales. Although these processes have importance for the role of charcoal in global biogeochemistry, they remain poorly understood. Here we present results of an investigation into the susceptibility of a range of charcoal samples to oxidative degradation in acidified potassium dichromate. The study examines both freshly-produced charcoal, and charcoal exposed to environmental conditions for up to 50,000 years. We compare the proportion of carbon present in different forms between the samples, specifically with respect to the relative chemical resistance of these forms. This was undertaken in order to improve understanding of the post-depositional diagenetic changes affecting charcoal within environmental deposits. A wide range in chemical compositions are apparent both within and between the sample groups. In freshly-produced charcoal, material produced at 300 °C contains carbon with more labile forms than charcoal produced at ⩾400 °C, signifying a key chemical change over the 300-400 °C temperature range. Charcoal exposed to environmental depositional conditions is frequently composed of a highly carboxylated aromatic structure and contains a range of carbon fractions of varying oxidative resistance. These findings suggest that a significant number of the environmental charcoals have undergone post-depositional diagenetic alteration. Further, the data highlight the potential for the use of controlled progressive oxidative degradation as a method to characterize chemical differences between individual charcoal samples.

  10. A diagnostic guide for Fusarium Root Rot of pea

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fusarium root rot, caused by Fusarium solani f. sp. pisi, is a major root rot pathogen in pea production areas worldwide. Here we provide a diagnostic guide that describes: the taxonomy of the pathogen, signs and symptoms of the pathogen, host range, geographic distribution, methods used to isolate ...

  11. RotCFD Software Validation - Computational and Experimental Data Comparison

    NASA Technical Reports Server (NTRS)

    Fernandez, Ovidio Montalvo

    2014-01-01

    RotCFD is a software intended to ease the design of NextGen rotorcraft. Since RotCFD is a new software still in the development process, the results need to be validated to determine the software's accuracy. The purpose of the present document is to explain one of the approaches to accomplish that goal.

  12. Development of a DNA Microarray-Based Assay for the Detection of Sugar Beet Root Rot Pathogens.

    PubMed

    Liebe, Sebastian; Christ, Daniela S; Ehricht, Ralf; Varrelmann, Mark

    2016-01-01

    Sugar beet root rot diseases that occur during the cropping season or in storage are accompanied by high yield losses and a severe reduction of processing quality. The vast diversity of microorganism species involved in rot development requires molecular tools allowing simultaneous identification of many different targets. Therefore, a new microarray technology (ArrayTube) was applied in this study to improve diagnosis of sugar beet root rot diseases. Based on three marker genes (internal transcribed spacer, translation elongation factor 1 alpha, and 16S ribosomal DNA), 42 well-performing probes enabled the identification of prevalent field pathogens (e.g., Aphanomyces cochlioides), storage pathogens (e.g., Botrytis cinerea), and ubiquitous spoilage fungi (e.g., Penicillium expansum). All probes were proven for specificity with pure cultures from 73 microorganism species as well as for in planta detection of their target species using inoculated sugar beet tissue. Microarray-based identification of root rot pathogens in diseased field beets was successfully confirmed by classical detection methods. The high discriminatory potential was proven by Fusarium species differentiation based on a single nucleotide polymorphism. The results demonstrate that the ArrayTube constitute an innovative tool allowing a rapid and reliable detection of plant pathogens particularly when multiple microorganism species are present. PMID:26524545

  13. Mechanisms of degradation by white rot fungi

    SciTech Connect

    Aust, S.D.

    1995-06-01

    White rot fungi use a variety of mechanisms to accomplish the complete degradation of lignin and a wide variety of environmental pollutants. Both oxidative and reductive reactions are required for the metabolism of both lignin and environmental pollutants. The fungi secrete a family of peroxidases to catalyze both direct and indirect oxidation of chemicals. The peroxidases can also catalyze reductions using electron donors to generate reductive radicals. A cell-surface membrane potential can also be used to reduce chemicals such as TNT. 19 refs., 2 figs.

  14. Over-expression of rice leucine-rich repeat protein results in activation of defense response, thereby enhancing resistance to bacterial soft rot in Chinese cabbage.

    PubMed

    Park, Young Ho; Choi, Changhyun; Park, Eun Mi; Kim, Hyo Sun; Park, Hong Jae; Bae, Shin Cheol; Ahn, Ilpyung; Kim, Min Gab; Park, Sang Ryeol; Hwang, Duk-Ju

    2012-10-01

    Pectobacterium carotovorum subsp. carotovorum causes soft rot disease in various plants, including Chinese cabbage. The simple extracellular leucine-rich repeat (eLRR) domain proteins have been implicated in disease resistance. Rice leucine-rich repeat protein (OsLRP), a rice simple eLRR domain protein, is induced by pathogens, phytohormones, and salt. To see whether OsLRP enhances disease resistance to bacterial soft rot, OsLRP was introduced into Chinese cabbage by Agrobacterium-mediated transformation. Two independent transgenic lines over-expressing OsLRP were generated and further analyzed. Transgenic lines over-expressing OsLRP showed enhanced disease resistance to bacterial soft rot compared to non-transgenic control. Bacterial growth was retarded in transgenic lines over-expressing OsLRP compared to non-transgenic controls. We propose that OsLRP confers enhanced resistance to bacterial soft rot. Monitoring expression of defense-associated genes in transgenic lines over-expressing OsLRP, two different glucanases and Brassica rapa polygalacturonase inhibiting protein 2, PDF1 were constitutively activated in transgenic lines compared to non-transgenic control. Taken together, heterologous expression of OsLRP results in the activation of defense response and enhanced resistance to bacterial soft rot.

  15. Removal of NOx or its conversion into harmless gases by charcoals and composites of metal oxides

    SciTech Connect

    Ishihara, Shigehisa; Furutsuka, Takeshi

    1996-12-31

    In recent years, much attention has been devoted to environmental problems such as acid rain, photochemical smog and water pollution. In particular, NOx emissions from factories, auto mobiles, etc. in urban areas have become worse. To solve these problems on environmental pollution on a global scale, the use of activated charcoal to reduce air pollutants is increasing. However, the capability of wood-based charcoal materials is not yet fully known. The removal of NOx or its conversion into harmless gases such as N{sub 2} should be described. In this study, the adsorption of NO over wood charcoal or metal oxide-dispersed wood charcoal was investigated. In particular, carbonized wood powder of Sugi (Cryptomeria japonica D. Don) was used to study the effectivity of using these materials in adsorbing NOx. Since wood charcoal is chemically stable, metal oxide with the ability of photocatalysis was dispersed into wood charcoal to improve its adsorption and capability to use the light energy effectively.

  16. Global charcoal mobilization from soils via dissolution and riverine transport to the oceans.

    PubMed

    Jaffé, Rudolf; Ding, Yan; Niggemann, Jutta; Vähätalo, Anssi V; Stubbins, Aron; Spencer, Robert G M; Campbell, John; Dittmar, Thorsten

    2013-04-19

    Global biomass burning generates 40 million to 250 million tons of charcoal every year, part of which is preserved for millennia in soils and sediments. We have quantified dissolution products of charcoal in a wide range of rivers worldwide and show that globally, a major portion of the annual charcoal production is lost from soils via dissolution and subsequent transport to the ocean. The global flux of soluble charcoal accounts to 26.5 ± 1.8 million tons per year, which is ~10% of the global riverine flux of dissolved organic carbon (DOC). We suggest that the mobilization of charcoal and DOC out of soils is mechanistically coupled. This study closes a major gap in the global charcoal budget and provides critical information in the context of geoengineering.

  17. Shade tree spatial structure and pod production explain frosty pod rot intensity in cacao agroforests, Costa Rica.

    PubMed

    Gidoin, Cynthia; Avelino, Jacques; Deheuvels, Olivier; Cilas, Christian; Bieng, Marie Ange Ngo

    2014-03-01

    Vegetation composition and plant spatial structure affect disease intensity through resource and microclimatic variation effects. The aim of this study was to evaluate the independent effect and relative importance of host composition and plant spatial structure variables in explaining disease intensity at the plot scale. For that purpose, frosty pod rot intensity, a disease caused by Moniliophthora roreri on cacao pods, was monitored in 36 cacao agroforests in Costa Rica in order to assess the vegetation composition and spatial structure variables conducive to the disease. Hierarchical partitioning was used to identify the most causal factors. Firstly, pod production, cacao tree density and shade tree spatial structure had significant independent effects on disease intensity. In our case study, the amount of susceptible tissue was the most relevant host composition variable for explaining disease intensity by resource dilution. Indeed, cacao tree density probably affected disease intensity more by the creation of self-shading rather than by host dilution. Lastly, only regularly distributed forest trees, and not aggregated or randomly distributed forest trees, reduced disease intensity in comparison to plots with a low forest tree density. A regular spatial structure is probably crucial to the creation of moderate and uniform shade as recommended for frosty pod rot management. As pod production is an important service expected from these agroforests, shade tree spatial structure may be a lever for integrated management of frosty pod rot in cacao agroforests.

  18. Comment on "Fire-derived charcoal causes loss of forest humus".

    PubMed

    Lehmann, Johannes; Sohi, Saran

    2008-09-01

    Wardle et al. (Brevia, 2 May 2008, p. 629) reported that fire-derived charcoal can promote loss of forest humus and belowground carbon (C). However, C loss from charcoal-humus mixtures can be explained not only by accelerated loss of humus but also by loss of charcoal. It is also unclear whether such loss is related to mineralization to carbon dioxide or to physical export.

  19. [Traveler's diarrhea in Turkey. Prospective randomized therapeutic comparison of charcoal versus tannin albuminate/ethacridine lactate].

    PubMed

    Ziegenhagen, D J; Raedsch, R; Kruis, W

    1992-12-15

    In most cases traveler's diarrhea is a self-limiting disease not requiring professional assistance. As data on self-treatment are very limited, a prospective randomized trial was performed in 620 German tourists spending a two week-holiday in Turkey. 31.6% of these travelers developed diarrhea and 186 were assigned to two treatment groups, receiving either medical coal or a combination of tannalbuminate and ethacridinlactate (TA/EL). In the TA/EL group stool frequencies significantly earlier returned to normal and complaints of moderate to severe abdominal pain were recorded less frequently (50 vs. 82.2%) than in patients receiving charcoal preparations. Both medications were well tolerated and TA/EL appeared more efficient for self medication of uncomplicated traveler's diarrhea.

  20. Recovery and Determination of Adsorbed Technetium on Savannah River Site Charcoal Stack Samples

    SciTech Connect

    Lahoda, Kristy G.; Engelmann, Mark D.; Farmer, Orville T.; Ballou, Nathan E.

    2008-03-01

    Experimental results are provided for the sample analyses for technetium (Tc) in charcoal samples placed in-line with a Savannah River Site (SRS) processing stack effluent stream as a part of an environmental surveillance program. The method for Tc removal from charcoal was based on that originally developed with high purity charcoal. Presented is the process that allowed for the quantitative analysis of 99Tc in SRS charcoal stack samples with and without 97Tc as a tracer. The results obtained with the method using the 97Tc tracer quantitatively confirm the results obtained with no tracer added. All samples contain 99Tc at the pg g-1 level.

  1. Comparison of Impurities in Charcoal Sorbents Found by Neutron Activation Analysis

    SciTech Connect

    Doll, Charles G.; Finn, Erin C.; Cantaloub, Michael G.; Greenwood, Lawrence R.; Kephart, Jeremy; Kephart, Rosara F.

    2013-01-01

    Abstract: Neutron activation of gas samples in a reactor often requires a medium to retain sufficient amounts of the gas for analysis. Charcoal is commonly used to adsorb gas and hold it for activation; however, the amount of activated sodium in the charcoal after irradiation swamps most signals of interest. Neutron activation analysis (NAA) was performed on several commonly available charcoal samples in an effort to determine the activation background. The results for several elements, including the dominant sodium element, are reported. It was found that ECN charcoal had the lowest elemental background, containing sodium at 2.65 ± 0.05 ppm, as well as trace levels of copper and tungsten.

  2. Some Investigations of the Reaction of Activated Charcoal with Fluorine and Uranium Hexafluoride

    SciTech Connect

    Del Cul, G.D.; Fiedor, J.N.; Simmons, D.W.; Toth, L.M.; Trowbridge, L.D.; Williams

    1998-09-01

    The Molten Salt Reactor Experiment (MSRE) at Oak Ridge National Laboratory has been shut down since 1969, when the fuel salt was drained from the core into two Hastelloy N drain tanks at the reactor site. Over time, fluorine (F{sub 2}) and uranium hexafluoride (UF{sub 6}) moved from the salt through the gas piping to a charcoal bed, where they reacted with the activated charcoal. Some of the immediate concerns related to the migration of F{sub 2} and UF{sub 6} to the charcoal bed were the possibility of explosive reactions between the charcoal and F{sub 2}, the existence of conditions that could induce a criticality accident, and the removal and recovery of the fissile uranium from the charcoal. This report addresses the reactions and reactivity of species produced by the reaction of fluorine and activated charcoal and between charcoal and F{sub 2}-UF{sub 6} gas mixtures in order to support remediation of the MSRE auxiliary charcoal bed (ACB) and the recovery of the fissile uranium. The chemical identity, stoichiometry, thermochemistry, and potential for explosive decomposition of the primary reaction product, fluorinated charcoal, was determined.

  3. Charcoal morphometry for paleoecological analysis: The effects of fuel type and transportation on morphological parameters1

    PubMed Central

    Crawford, Alastair J.; Belcher, Claire M.

    2014-01-01

    • Premise of the study: Charcoal particles preserved in sediments are used as indicators of paleowildfire. Most research focuses on abundance as an indicator of fire frequency, but charcoals also convey information about the vegetation from which they are derived. One potential source of information is their morphology, which is influenced by the parent material, the nature of the fire, and subsequent transportation and burial. • Methods: We charcoalified 26 materials from a range of plant taxa, and subjected them to simulated fluvial transport by tumbling them with water and gravel. We photographed the resulting particles, and used image analysis software to measure morphological parameters. • Results: Leaf charcoal displayed a logarithmic decrease in area, and a logarithmic increase in circularity, with transportation time. Trends were less clear for stem or wood charcoal. Grass charcoal displayed significantly higher aspect ratios than other charcoal types. • Conclusions: Leaf charcoal displays more easily definable relationships between morphological parameters and degree of breakdown than stem or wood charcoal. The aspect ratios of fossil mesocharcoal can indicate the broad botanical source of an assemblage. Coupled to estimates of charcoal abundance, this will improve understanding of the variation in flammability of ancient ecosystems. PMID:25202644

  4. The effect of weathering on charcoal filter performance. 2; The effect of contaminants on the CH sub 3 I removal efficiency of TEDA charcoal

    SciTech Connect

    Wren, J.C.; Moore, C.J. )

    1991-05-01

    The effect of various contaminants, namely NO{sub 2} SO{sub 2}, 2-butanone (methyl-ethyl-ketone (MEK)), and NH{sub 3}, on the radioiodine removal efficiency of triethylenediamine (TEDA)-impregnated charcoal filters has been studied, and an attempt was made to characterize and quantify the weathering process of TEDA charcoal by these contaminants. The effects of the contaminants on the CH{sub 3}I removal efficiency of TEDA charcoal under dry and humid conditions are described. Based on our results, the efficiency of TEDA charcoal is degraded most by NO{sub 2} and SO{sub 2}, NH{sub 3} has a negligible effect, and MEK produces a mild degradation. The degree of degradation parallels the contaminant's ability to be chemisorbed on the TEDA impregnant. The combined effect of water vapor and a contaminant of the charcoal efficiency is different for each contaminant. Nitrogen dioxide absorbed under dry conditions is more effective in degrading the CH{sub 2}I removal efficiency of the charcoal that when absorbed under humid conditions. On the other hand, a completely opposite result is observed for SO{sub 2}. The MEK contaminant behaves similarly to SO{sub 2} but the effect of humidity was less significant than for SO{sub 2}. Ammonia has no effect on the efficiency of the charcoal regardless of humidity.

  5. Molecular Characterization of Resistant Accessions of Cocoa (Theobroma cocoa L.) to Phytophthora Pod Rot Selected on-Farm in Côte-d’Ivoire.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cocoa is (Theobroma cacao L.) is a significant agricultural commodity in Côted’Ivoire which ranks 1st in the world cocoa export. Phytophthora pod rot (Ppr)also call Black pod is the most widespread disease of cocoa. Lost due to this disease depends on the species of the pathogen and vary globally fr...

  6. Acute Kidney Injury Predicts Mortality after Charcoal Burning Suicide

    PubMed Central

    Chen, Yu-Chin; Tseng, Yi-Chia; Huang, Wen-Hung; Hsu, Ching-Wei; Weng, Cheng-Hao; Liu, Shou-Hsuan; Yang, Huang-Yu; Chen, Kuan-Hsin; Chen, Hui-Ling; Fu, Jen-Fen; Lin, Wey-Ran; Wang, I-Kuan; Yen, Tzung-Hai

    2016-01-01

    A paucity of literature exists on risk factors for mortality in charcoal burning suicide. In this observational study, we analyzed the data of 126 patients with charcoal burning suicide that seen between 2002 and 2013. Patients were grouped according to status of renal damage as acute kidney injury (N = 49) or non-acute kidney injury (N = 77). It was found that patients with acute kidney injury suffered severer complications such as respiratory failure (P = 0.002), myocardial injury (P = 0.049), hepatic injury (P < 0.001), rhabdomyolysis (P = 0.045) and out-of-hospital cardiac arrest (P = 0.028) than patients without acute kidney injury. Moreover, patients with acute kidney injury suffered longer hospitalization duration (16.9 ± 18.3 versus 10.7 ± 10.9, P = 0.002) and had higher mortality rate (8.2% versus 0%, P = 0.011) than patients without injury. In a multivariate Cox regression model, it was demonstrated that serum creatinine level (P = 0.019) and heart rate (P = 0.022) were significant risk factors for mortality. Finally, Kaplan-Meier analysis revealed that patients with acute kidney injury suffered lower cumulative survival than without injury (P = 0.016). In summary, the overall mortality rate of charcoal burning suicide population was 3.2%, and acute kidney injury was a powerful predictor of mortality. Further studies are warranted. PMID:27430168

  7. Acute Kidney Injury Predicts Mortality after Charcoal Burning Suicide.

    PubMed

    Chen, Yu-Chin; Tseng, Yi-Chia; Huang, Wen-Hung; Hsu, Ching-Wei; Weng, Cheng-Hao; Liu, Shou-Hsuan; Yang, Huang-Yu; Chen, Kuan-Hsin; Chen, Hui-Ling; Fu, Jen-Fen; Lin, Wey-Ran; Wang, I-Kuan; Yen, Tzung-Hai

    2016-01-01

    A paucity of literature exists on risk factors for mortality in charcoal burning suicide. In this observational study, we analyzed the data of 126 patients with charcoal burning suicide that seen between 2002 and 2013. Patients were grouped according to status of renal damage as acute kidney injury (N = 49) or non-acute kidney injury (N = 77). It was found that patients with acute kidney injury suffered severer complications such as respiratory failure (P = 0.002), myocardial injury (P = 0.049), hepatic injury (P < 0.001), rhabdomyolysis (P = 0.045) and out-of-hospital cardiac arrest (P = 0.028) than patients without acute kidney injury. Moreover, patients with acute kidney injury suffered longer hospitalization duration (16.9 ± 18.3 versus 10.7 ± 10.9, P = 0.002) and had higher mortality rate (8.2% versus 0%, P = 0.011) than patients without injury. In a multivariate Cox regression model, it was demonstrated that serum creatinine level (P = 0.019) and heart rate (P = 0.022) were significant risk factors for mortality. Finally, Kaplan-Meier analysis revealed that patients with acute kidney injury suffered lower cumulative survival than without injury (P = 0.016). In summary, the overall mortality rate of charcoal burning suicide population was 3.2%, and acute kidney injury was a powerful predictor of mortality. Further studies are warranted. PMID:27430168

  8. Comparing modeled fire dynamics with charcoal records for the Holocene

    NASA Astrophysics Data System (ADS)

    Bruecher, T.; Brovkin, V.; Kloster, S.; Marlon, J. R.; Power, M. J.

    2013-12-01

    An Earth System model of intermediate complexity, CLIMBER-2, and land surface model JSBACH that includes dynamic vegetation, carbon cycle, and fire regime are used for simulation of natural fire dynamics through the last 8,000 years. To compare the fire model results with the charcoal reconstructions, several output variables of the fire model (burned area, carbon emissions) and several approaches of model output processing are tested. The z-scores out of charcoal dataset have been calculated for the period 8,000 to 200 BP to exclude a period of strong anthropogenic forcing during the last two centuries. The model analysis points mainly to an increasing fire activity during the Holocene for most of the investigated areas, which is in good correspondence to reconstructed fire trends out of charcoal data for most of the tested regions, while for few regions such as Europe the simulated trend and the reconstructed trends are different. The difference between the modeled and reconstructed fire activity could be due to absence of the anthropogenic forcing in the model simulations, but also due to limitations of model assumptions for modeling fire dynamics. For the model trends, the usage of averaging or z-score processing of model output resulted in similar directions of trend. Therefore, the approach of fire model output processing does not effect results of the model-data comparison. Global fire modeling is still in its infancy; improving our representations of fire through validation exercises such as what we present here is thus essential before testing hypotheses about the effects of extreme climate changes on fire behavior and potential feedbacks that result from those changes.

  9. Global control in Pseudomonas fluorescens mediating antibiotic synthesis and suppression of black root rot of tobacco.

    PubMed Central

    Laville, J; Voisard, C; Keel, C; Maurhofer, M; Défago, G; Haas, D

    1992-01-01

    Pseudomonas fluorescens CHA0 colonizes plant roots, produces several secondary metabolites in stationary growth phase, and suppresses a number of plant diseases, including Thielaviopsis basicola-induced black root rot of tobacco. We discovered that mutations in a P. fluorescens gene named gacA (for global antibiotic and cyanide control) pleiotropically block the production of the secondary metabolites 2,4-diacetylphloroglucinol (Phl), HCN, and pyoluteorin. The gacA mutants of strain CHA0 have a drastically reduced ability to suppress black root rot under gnotobiotic conditions, supporting the previous observations that the antibiotic Phl and HCN individually contribute to the suppression of black root rot. The gacA gene is directly followed by a uvrC gene. Double gacA-uvrC mutations render P. fluorescens sensitive to UV irradiation. The gacA-uvrC cluster is homologous to the orf-2 (= uvrY)-uvrC operon of Escherichia coli. The gacA gene specifies a trans-active 24-kDa protein. Sequence data indicate that the GacA protein is a response regulator in the FixJ/DegU family of two-component regulatory systems. Expression of the gacA gene itself was increased in stationary phase. We propose that GacA, perhaps activated by conditions of restricted growth, functions as a global regulator of secondary metabolism in P. fluorescens. Images PMID:1311842

  10. Detection of hidden pre-industrial charcoal kilns by high-resolution LIDAR

    NASA Astrophysics Data System (ADS)

    Raab, Thomas; Raab, Alexandra; Nicolay, Alexander; Takla, Melanie; Rösler, Horst; Bönisch, Eberhard

    2013-04-01

    Over the last decade, systematic archaeological excavations in the open-cast mine Jänschwalde (Brandenburg, Germany) have revealed one of the largest, archaeologically excavated pre-industrial charcoal production area in Central Europe. Many of the charcoal kiln relics are easy to detect by survey as they lie close to the surface and charcoal pieces hint on their existence. In the excavations the remains of the charcoal kilns are distinct, black circles in the light-coloured sands. To date, in the former Königlich-Taubendorfer Forst c. 800 remains of charcoal hearths have been excavated and documented by archaeologists in an area of about 20 km2. Further c. 300 charcoal hearths are prospected by survey. Unfortunately, the spatial information about the charcoal kiln sites in Lower Lusatia (and elsewhere) is incomplete since we only have data from the archaeological excavation and prospection in the directly affected mining district. To fill this gap, we decided to test the applicability of Airborne Laser Scanning (ALS) data for charcoal kiln prospection. The particularly improved quality of the recent high-resolution light detection and ranging (LIDAR) data enabled the computer-aided detection of charcoal kilns and their evaluation using a geographical information system (GIS). Following data processing, the charcoal kilns are visible as buttons-like shapes in the shaded-relief maps (SRM). The characteristic shapes arise because the kiln plates are some centimetres to decimetres higher than the ditches around them. Numerous ground checks confirmed the applicability of the prospection by ALS data. But, we also assume that c. 10% of the charcoal kilns remain unidentified. A 26.6 km2 study area in the Tauerscher Forst, a forest about 10 km northwest of the open-cast mine Jänschwalde, was selected for prospection using a 1 m resolution ALS data set from the year 2011. Today, the area is forested with pine, and no archaeological excavation has been carried out so far

  11. A synthesis of parameters related to the binding of neutral organic compounds to charcoal.

    PubMed

    Hale, Sarah E; Arp, Hans Peter H; Kupryianchyk, Darya; Cornelissen, Gerard

    2016-02-01

    The sorption strength of neutral organic compounds to charcoal, also called biochar was reviewed and related to charcoal and compound properties. From 29 studies, 507 individual Freundlich sorption coefficients were compiled that covered the sorption strength of 107 organic contaminants. These sorption coefficients were converted into charcoal-water distribution coefficients (K(D)) at aqueous concentrations of 1 ng/L, 1 µg/L and 1 mg/L. Reported log K(D) values at 1 µg/L varied from 0.38 to 8.25 across all data. Variation was also observed within the compound classes; pesticides, herbicides and insecticides, PAHs, phthalates, halogenated organics, small organics, alcohols and PCBs. Five commonly reported variables; charcoal production temperature T, surface area SA, H/C and O/C ratios and organic compound octanol-water partitioning coefficient, were correlated with KD values using single and multiple-parameter linear regressions. The sorption strength of organic compounds to charcoals increased with increasing charcoal production temperature T, charcoal SA and organic pollutant octanol-water partitioning coefficient and decreased with increasing charcoal O/C ratio and charcoal H/C ratio. T was found to be correlated with SA (r(2) = 0.66) and O/C (r(2) = 0.50), particularly for charcoals produced from wood feedstocks (r(2) = 0.73 and 0.80, respectively). The resulting regression: log K(D)=(0.18 ± 0.06) log K(ow) + (5.74 ± 1.40) log T + (0.85 ± 0.15) log SA + (1.60 ± 0.29) log OC + (-0.89 ± 0.20) log HC + (-13.20 ± 3.69), r(2) = 0.60, root mean squared error = 0.95, n = 151 was obtained for all variables. This information can be used as an initial screening to identify charcoals for contaminated soil and sediment remediation. PMID:26347927

  12. A synthesis of parameters related to the binding of neutral organic compounds to charcoal.

    PubMed

    Hale, Sarah E; Arp, Hans Peter H; Kupryianchyk, Darya; Cornelissen, Gerard

    2016-02-01

    The sorption strength of neutral organic compounds to charcoal, also called biochar was reviewed and related to charcoal and compound properties. From 29 studies, 507 individual Freundlich sorption coefficients were compiled that covered the sorption strength of 107 organic contaminants. These sorption coefficients were converted into charcoal-water distribution coefficients (K(D)) at aqueous concentrations of 1 ng/L, 1 µg/L and 1 mg/L. Reported log K(D) values at 1 µg/L varied from 0.38 to 8.25 across all data. Variation was also observed within the compound classes; pesticides, herbicides and insecticides, PAHs, phthalates, halogenated organics, small organics, alcohols and PCBs. Five commonly reported variables; charcoal production temperature T, surface area SA, H/C and O/C ratios and organic compound octanol-water partitioning coefficient, were correlated with KD values using single and multiple-parameter linear regressions. The sorption strength of organic compounds to charcoals increased with increasing charcoal production temperature T, charcoal SA and organic pollutant octanol-water partitioning coefficient and decreased with increasing charcoal O/C ratio and charcoal H/C ratio. T was found to be correlated with SA (r(2) = 0.66) and O/C (r(2) = 0.50), particularly for charcoals produced from wood feedstocks (r(2) = 0.73 and 0.80, respectively). The resulting regression: log K(D)=(0.18 ± 0.06) log K(ow) + (5.74 ± 1.40) log T + (0.85 ± 0.15) log SA + (1.60 ± 0.29) log OC + (-0.89 ± 0.20) log HC + (-13.20 ± 3.69), r(2) = 0.60, root mean squared error = 0.95, n = 151 was obtained for all variables. This information can be used as an initial screening to identify charcoals for contaminated soil and sediment remediation.

  13. Concentrations and bioaccessibilities of trace elements in barbecue charcoals.

    PubMed

    Sharp, Annabel; Turner, Andrew

    2013-11-15

    Total and bioaccessible concentrations of trace elements (Al, As, Cd, Cu, Fe, Hg, Mn, Ni, Pb and Zn) have been measured in charcoals from 15 barbecue products available from UK retailers. Total concentrations (available to boiling aqua regia) were greater in briquetted products (with mean concentrations ranging from 0.16 μg g(-1) for Cd to 3240 μg g(-1) for Al) than in lumpwoods (0.007 μg g(-1) for Cd to 28 μg g(-1) for Fe), presumably because of the use of additives and secondary constituents (e.g. coal) in the former. On ashing, and with the exception of Hg, elemental concentrations increased by factors ranging from about 1.5 to 50, an effect attributed to the combustion of organic components and offset to varying extents by the different volatilities of the elements. Concentrations in the ashed products that were bioaccessible, or available to a physiologically based extraction test (PBET) that simulates, successively, the chemical conditions in the human stomach and intestine, exhibited considerable variation among the elements studied. Overall, however, bioaccessible concentrations relative to corresponding total concentrations were greatest for As, Cu and Ni (attaining 100% in either or both simulated PBET phases in some cases) and lowest for Pb (generally <1% in both phases). A comparison of bioaccessible concentrations in ashed charcoals with estimates of daily dietary intake suggest that Al and As are the trace elements of greatest concern to human health from barbecuing.

  14. Experimental Research of Pyrolysis Gases Cracking on Surface of Charcoal

    NASA Astrophysics Data System (ADS)

    Kosov, Valentin; Kosov, Vladimir; Zaichenko, Victor

    For several years, in the Joint Institute for High Temperatures of Russian Academy of Sciences, two-stage technology of biomass processing has been developing [1]. The technology is based on pyrolysis of biomass as the first stage. The second stage is high-temperature conversion of liquid fraction of the pyrolysis on the surface of porous charcoal matrix. Synthesis gas consisted of carbon monoxide and hydrogen is the main products of the technology. This gas is proposed to be used as fuel for gas-engine power plant. For practical implementation of the technology it is important to know the size of hot char filter for full cracking of the pyrolysis gases on the surface of charcoal. Theoretical determination of the cracking parameters of the pyrolysis gases on the surface of coal is extremely difficult because the pyrolysis gases include tars, whose composition and structure is complicated and depends on the type of initial biomass. It is also necessary to know the surface area of the char used in the filter, which is also a difficult task. Experimental determination of the hot char filter parameters is presented. It is shown that proposed experimental method can be used for different types of biomass.

  15. Degradation of xenobiotics by white rot fungi

    SciTech Connect

    Higson, F.K. )

    1991-01-01

    White rot fungi such as P. chrysosporium degrade the nonrepeating, nonstereoselective, insoluble polymer lignin under conditions of nutrient limitation. The attack on lignin principally involves extracellular peroxidases (ligninases) and hydrogen peroxide. Hydroxyl radicals may also make a significant contribution. The ligninolytic system lends itself to the degradation of xenobiotics, since these often have limited solubility in water and are not readily available in soil to intracellular metabolism. A nonspecific attack should proceed at a rate independent of the target's concentration and the fungal system would be expected to remediate soil contaminated with a mixture of compounds. This contrasts with the need for induction and problems with simultaneous metabolism encountered with bacterial inoculation. The P. chrysosporium system has been found active against such diverse substrates as DDT, lindane, PCBs, TNT and crystal violet, with substantial mineralization in many cases. Some like biphenyl and triphenylmethane dyes are structurally related to lignin substructures while others bear groups such as nitro (TNT) or halogen (PCP) that are absent from the natural polymer. The fate of transformed targets varies: pentachlorophenol is incorporated into soil organic matter as a result of fungal ligninase action, whereas highly lipophilic Aroclor PCBs are converted to water-soluble metabolites. Normally less toxic intermediates are generated: for example, with benzo(a)pyrene, mutagenic arene oxides do not appear in the white rot fungal system. In certain cases, purified ligninases were also active in degrading pollutants such as PCP, benzo(a)pyrene or triphenylmethane dyes. Methods of optimizing ligninase activity in fungal reactors have been described. 257 references.

  16. Carbon Sequestration and Fertility after Centennial Time Scale Incorporation of Charcoal into Soil

    PubMed Central

    Criscuoli, Irene; Alberti, Giorgio; Baronti, Silvia; Favilli, Filippo; Martinez, Cristina; Calzolari, Costanza; Pusceddu, Emanuela; Rumpel, Cornelia; Viola, Roberto; Miglietta, Franco

    2014-01-01

    The addition of pyrogenic carbon (C) in the soil is considered a potential strategy to achieve direct C sequestration and potential reduction of non-CO2 greenhouse gas emissions. In this paper, we investigated the long term effects of charcoal addition on C sequestration and soil physico-chemical properties by studying a series of abandoned charcoal hearths in the Eastern Alps of Italy established in the XIX century. This natural setting can be seen as an analogue of a deliberate experiment with replications. Carbon sequestration was assessed indirectly by comparing the amount of pyrogenic C present in the hearths (23.3±4.7 kg C m−2) with the estimated amount of charcoal that was left on the soil after the carbonization (29.3±5.1 kg C m−2). After taking into account uncertainty associated with parameters’ estimation, we were able to conclude that 80±21% of the C originally added to the soil via charcoal can still be found there and that charcoal has an overall Mean Residence Time of 650±139 years, thus supporting the view that charcoal incorporation is an effective way to sequester atmospheric CO2. We also observed an overall change in the physical properties (hydrophobicity and bulk density) of charcoal hearth soils and an accumulation of nutrients compared to the adjacent soil without charcoal. We caution, however, that our site-specific results should not be generalized without further study. PMID:24614647

  17. Some theoretical priciples of the activation of wood charcoal by steam

    SciTech Connect

    Fedoseev, A.S.

    1982-01-01

    Kinetics and diffusion in the pores of a carbonaceous material are considered. The macroscopic rate of the reaction of steam with the carbon of wood charcoal has been determined. The optimum conditions for the activation of wood charcoal have been found.

  18. Effect of charcoal amendment on adsorption, leaching and degradation of isoproturon in soils.

    PubMed

    Si, Youbin; Wang, Midao; Tian, Chao; Zhou, Jing; Zhou, Dongmei

    2011-04-01

    The effects of charcoal amendment on adsorption, leaching and degradation of the herbicide isoproturon in soils were studied under laboratory conditions. The adsorption data all fitted well with the Freundlich empirical equation. It was found that the adsorption of isoproturon in soils increased with the rate of charcoal amended (correlation coefficient r=0.957**, P<0.01). The amount of isoproturon in leachate decreased with the increase of the amount of charcoal addition to soil column, while the retention of isoproturon in soils increased with an increase in the charcoal content of soil samples. Biodegradation was still the most significant mechanism for isoproturon dissipation from soil. Charcoal amendment greatly reduced the biodegradation of isoproturon in soils. The half-lives of isoproturon degradation (DT(50)) in soils greatly extended when the rate of added charcoal increased from 0 to 50 g kg(-1) (for Paddy soil, DT(50) values increased from 54.6 to 71.4 days; for Alfisol, DT(50) from 16.0 to 136 days; and for Vertisol, DT(50) from 15.2 to 107 days). The degradation rate of isoproturon in soils was significantly negatively correlated with the amount of added charcoal. This research suggests that charcoal amendment may be an effective management practice for reducing pesticide leaching and enhancing its persistence in soils.

  19. Rapid spread of suicide by charcoal burning from 2007 to 2011 in Korea.

    PubMed

    Lee, Ah-Rong; Ahn, Myung Hee; Lee, Tae Yeop; Park, Subin; Hong, Jin Pyo

    2014-11-30

    Despite rapid increase of suicide by charcoal burning within 5 years, little is known about the characteristics of charcoal burning suicide in Korea. This study aimed to examine the trends and risk factors in the spread of suicide using this method. We identified an association between media reporting of suicide by charcoal burning and its incidence. Data on suicide from 2007 to 2011 were obtained from the Korean National Statistical Office. Cross-correlation analysis was used. Increasing incidence of suicide by charcoal burning was correlated with higher education levels, male sex, and the latter half of the year. Victims of charcoal burning suicide were more likely to be young, male, single, highly educated, professional, urban-based, and to die between October and December. Internet reports of suicide via charcoal burning tended to precede the increased incidence of suicide using this method, but only during the early period of the suicide epidemic. Our findings suggest that one episode of heavy media coverage of a novel method, such as charcoal burning, is sufficient to increase the prevalence of suicide by that method even after media coverage decreases. These findings are expected to contribute to the prevention of increasing rates of suicide by charcoal burning.

  20. Effects of carbonization parameters of Moso-bamboo-based porous charcoal on capturing carbon dioxide.

    PubMed

    Huang, Pei-Hsing; Jhan, Jhih-Wei; Cheng, Yi-Ming; Cheng, Hau-Hsein

    2014-01-01

    This study experimentally analyzed the carbon dioxide adsorption capacity of Moso-bamboo- (Phyllostachys edulis-) based porous charcoal. The porous charcoal was prepared at various carbonization temperatures and ground into powders with 60, 100, and 170 meshes, respectively. In order to understand the adsorption characteristics of porous charcoal, its fundamental properties, namely, charcoal yield, ash content, pH value, Brunauer-Emmett-Teller (BET) surface area, iodine number, pore volume, and powder size, were analyzed. The results show that when the carbonization temperature was increased, the charcoal yield decreased and the pH value increased. Moreover, the bamboo carbonized at a temperature of 1000(°)C for 2 h had the highest iodine sorption value and BET surface area. In the experiments, charcoal powders prepared at various carbonization temperatures were used to adsorb 1.854% CO2 for 120 h. The results show that the bamboo charcoal carbonized at 1000(°)C and ground with a 170 mesh had the best adsorpt on capacity, significantly decreasing the CO2 concentration to 0.836%. At room temperature and atmospheric pressure, the Moso-bamboo-based porous charcoal exhibited much better CO2 adsorption capacity compared to that of commercially available 350-mesh activated carbon.

  1. Time-dependent response of a charcoal bed to radon and water vapor in flowing air

    SciTech Connect

    Henkel, J.A.; Fentiman, A.W.; Blue, T.E.

    1995-12-31

    Extremely high airborne concentrations of radon gas may be encountered during the remediation of uranium mill tailings storage facilities. Radon is also a constituent of the off-gas of mill-tailing vitrification. An effective way to remove radon from either gas is to pass the gas through a packed bed containing activated charcoal. Measurements of radon concentrations in the environment using charcoal canisters were first described by George. Canisters similar to those used by George in his first experiments have become the U.S. Environmental Protection Agency`s (EPA`s) standard for measuring environmental radon and were described in the EPA protocol for environmental radon measurement. The dynamic behavior of EPA charcoal canisters has been previously described with a mathematical model for the kinetics of radon gas adsorption in air in the presence of water vapor. This model for charcoal canisters has been extended to large charcoal beds with flowing air containing radon and water vapor. The mathematical model for large charcoal beds can be used to evaluate proposed bed designs or to model existing beds. Parameters that affect the radon distribution within a charcoal bed that can be studied using the mathematical model include carrier gas relative humidity and flow velocity, and input radon concentration. In addition, the relative performances of several different charcoals can be studied, provided sufficient information about their adsorption, desorption, and diffusion constants is known.

  2. The effect of weathering on charcoal filter performance. 1; The adsorption and desorption behavior of contaminants

    SciTech Connect

    Wren, J.C.; Moore, C.J. )

    1991-05-01

    This paper reports on triethylenediamine (TEDA) impregnated charcoals, used in nuclear reactors to safeguard against the release of airborne radioiodine, which show high efficiency under various reactor operation and accident conditions when the are new. However, during normal operation, charcoal filters are continuously degraded (or weathered) due to the adsorption of moisture and other air contaminants. The effect of weathering on the efficiency of charcoal for removing radioiodine is of great interest. The results of a study on the adsorption behavior of various contaminants NO{sub 2}, SO{sub 2} 2-butanone (methyl-ethyl ketone (MEK)) and NH{sub 3} on TEDA charcoal are presented. This study is an attempt to characterize and quantify the weathering process of TEDA charcoal by these contaminants. The adsorption and desorption of characteristics of these contaminants range from completely irreversible (NO{sub 2}) to completely reversible (NH{sub 3}). The effect of absorbed water (or humidity) on absorption is different for each contaminant. Absorbed water increases the absorption rate and capacity of TEDA charcoal for NO{sub 2}. However, it appears that SO{sub 2} is absorbed as H{sub 2}SO{sub 4} on the wet charcoal. Absorbed water slightly reduces the adsorption capacity of the charcoal for MEK, but does not affect the absorption of NH{sub 3}.

  3. Carbon sequestration and fertility after centennial time scale incorporation of charcoal into soil.

    PubMed

    Criscuoli, Irene; Alberti, Giorgio; Baronti, Silvia; Favilli, Filippo; Martinez, Cristina; Calzolari, Costanza; Pusceddu, Emanuela; Rumpel, Cornelia; Viola, Roberto; Miglietta, Franco

    2014-01-01

    The addition of pyrogenic carbon (C) in the soil is considered a potential strategy to achieve direct C sequestration and potential reduction of non-CO2 greenhouse gas emissions. In this paper, we investigated the long term effects of charcoal addition on C sequestration and soil physico-chemical properties by studying a series of abandoned charcoal hearths in the Eastern Alps of Italy established in the XIX century. This natural setting can be seen as an analogue of a deliberate experiment with replications. Carbon sequestration was assessed indirectly by comparing the amount of pyrogenic C present in the hearths (23.3±4.7 kg C m(-2)) with the estimated amount of charcoal that was left on the soil after the carbonization (29.3±5.1 kg C m(-2)). After taking into account uncertainty associated with parameters' estimation, we were able to conclude that 80±21% of the C originally added to the soil via charcoal can still be found there and that charcoal has an overall Mean Residence Time of 650±139 years, thus supporting the view that charcoal incorporation is an effective way to sequester atmospheric CO2. We also observed an overall change in the physical properties (hydrophobicity and bulk density) of charcoal hearth soils and an accumulation of nutrients compared to the adjacent soil without charcoal. We caution, however, that our site-specific results should not be generalized without further study.

  4. ESTIMATION OF EMISSIONS FROM CHARCOAL LIGHTER FLUID AND REVIEW OF ALTERNATIVES

    EPA Science Inventory

    The report gives results of an evaluation of emissions of volatile organic compounds (VOCs) from charcoal lighter fluid, a consumer product consisting entirely of volatile constituents. An estimated 46,250 tons (42,000 Mg) of charcoal lighter fluid is used in the U.S. each year. ...

  5. Commercial charcoal production in the Ibarapa district of southwestern Nigeria: forestry dividends and welfare implications.

    PubMed

    Salami, Kabiru K; Brieger, William R

    2010-01-01

    Logging activities have long provided both wood fuel and charcoal for household and commercial use in rural and urban communities in developing countries. However, logging problems range from deforestation to threatened household air quality from burning wood and charcoal. This exploratory case study triangulated 15 in-depth interviews among charcoal bulk buyers and the workers, observations of workers at two èédú (charcoal) commercial depots in Igbo-Ora and of workers in the forest, and review of studies in academic database. Three categories of people are working in the business ranging from the producers in the forests (alaake) to the bulk buyers (olowo) in the middle and the wholesalers (ajagunta) in the city. A small team of 4-8 people can produce three pickup truck loads of charcoal in 2 weeks, and a large team between 7-8 loads. The olowo and the alaake have associations, membership cards, and meet to discuss business progress and regulate members' economic behavior. Close to 35,000 bags of charcoal of 450 pickup trucks may make the journey weekly from Ibarapa. Overall, the charcoal business is informal, and the local people also frown at cutting any useful indigenous trees ascertaining that an individual's actions may affect the whole community. The role of community health educators is important in the dissemination of effects of deforestation through charcoal production.

  6. Effect of charcoal amendment on adsorption, leaching and degradation of isoproturon in soils

    NASA Astrophysics Data System (ADS)

    Si, Youbin; Wang, Midao; Tian, Chao; Zhou, Jing; Zhou, Dongmei

    2011-04-01

    The effects of charcoal amendment on adsorption, leaching and degradation of the herbicide isoproturon in soils were studied under laboratory conditions. The adsorption data all fitted well with the Freundlich empirical equation. It was found that the adsorption of isoproturon in soils increased with the rate of charcoal amended (correlation coefficient r = 0.957 **, P < 0.01). The amount of isoproturon in leachate decreased with the increase of the amount of charcoal addition to soil column, while the retention of isoproturon in soils increased with an increase in the charcoal content of soil samples. Biodegradation was still the most significant mechanism for isoproturon dissipation from soil. Charcoal amendment greatly reduced the biodegradation of isoproturon in soils. The half-lives of isoproturon degradation ( DT50) in soils greatly extended when the rate of added charcoal inceased from 0 to 50 g kg - 1 (for Paddy soil, DT50 values increased from 54.6 to 71.4 days; for Alfisol, DT50 from 16.0 to 136 days; and for Vertisol, DT50 from 15.2 to 107 days). The degradation rate of isoproturon in soils was significantly negatively correlated with the amount of added charcoal. This research suggests that charcoal amendment may be an effective management practice for reducing pesticide leaching and enhancing its persistence in soils.

  7. URINARY MUTAGENICITY IN CHARCOAL WORKERS: A CROSS-SECTIONAL STUDY IN NORTHEASTERN BRAZIL

    EPA Science Inventory

    Urinary Mutagenicity in charcoal workers: a cross-sectional study in northeastern Brazil

    Charcoal production by wood carbonization is an ancient process that has changed little since the Bronze Age. Its production in large scale is necessary to sustain some steel and pig...

  8. Carbon sequestration and fertility after centennial time scale incorporation of charcoal into soil.

    PubMed

    Criscuoli, Irene; Alberti, Giorgio; Baronti, Silvia; Favilli, Filippo; Martinez, Cristina; Calzolari, Costanza; Pusceddu, Emanuela; Rumpel, Cornelia; Viola, Roberto; Miglietta, Franco

    2014-01-01

    The addition of pyrogenic carbon (C) in the soil is considered a potential strategy to achieve direct C sequestration and potential reduction of non-CO2 greenhouse gas emissions. In this paper, we investigated the long term effects of charcoal addition on C sequestration and soil physico-chemical properties by studying a series of abandoned charcoal hearths in the Eastern Alps of Italy established in the XIX century. This natural setting can be seen as an analogue of a deliberate experiment with replications. Carbon sequestration was assessed indirectly by comparing the amount of pyrogenic C present in the hearths (23.3±4.7 kg C m(-2)) with the estimated amount of charcoal that was left on the soil after the carbonization (29.3±5.1 kg C m(-2)). After taking into account uncertainty associated with parameters' estimation, we were able to conclude that 80±21% of the C originally added to the soil via charcoal can still be found there and that charcoal has an overall Mean Residence Time of 650±139 years, thus supporting the view that charcoal incorporation is an effective way to sequester atmospheric CO2. We also observed an overall change in the physical properties (hydrophobicity and bulk density) of charcoal hearth soils and an accumulation of nutrients compared to the adjacent soil without charcoal. We caution, however, that our site-specific results should not be generalized without further study. PMID:24614647

  9. Digital image processing applications in the ignition and combustion of char/coal particles

    SciTech Connect

    Annamalai, K.; Kharbat, E.; Goplakrishnan, C.

    1992-12-01

    Digital image processing, is employed in this remarch study in order to visually investigate the ignition and combustion characteristics of isolated char/coal particles as well as the effect of interactivecombustion in two-particle char/coal arrays. Preliminary experiments are conducted on miniature isolated candles as well as two-candle arrays.

  10. Water adsorption on charcoal: New approach in experimental studies and data representation

    SciTech Connect

    Geynisman, M.; Walker, R.

    1991-08-01

    The experimental apparatus was built to study the H{sub 2}O adsorption on charcoal at very low concentrations and collect the data in the form of isosteres. Experimental method is discussed and the global three-dimensional fit is constructed to predict the post-regeneration conditions of charcoal absorbers. 11 refs.

  11. Effects of Carbonization Parameters of Moso-Bamboo-Based Porous Charcoal on Capturing Carbon Dioxide

    PubMed Central

    Jhan, Jhih-Wei; Cheng, Yi-Ming; Cheng, Hau-Hsein

    2014-01-01

    This study experimentally analyzed the carbon dioxide adsorption capacity of Moso-bamboo- (Phyllostachys edulis-) based porous charcoal. The porous charcoal was prepared at various carbonization temperatures and ground into powders with 60, 100, and 170 meshes, respectively. In order to understand the adsorption characteristics of porous charcoal, its fundamental properties, namely, charcoal yield, ash content, pH value, Brunauer-Emmett-Teller (BET) surface area, iodine number, pore volume, and powder size, were analyzed. The results show that when the carbonization temperature was increased, the charcoal yield decreased and the pH value increased. Moreover, the bamboo carbonized at a temperature of 1000°C for 2 h had the highest iodine sorption value and BET surface area. In the experiments, charcoal powders prepared at various carbonization temperatures were used to adsorb 1.854% CO2 for 120 h. The results show that the bamboo charcoal carbonized at 1000°C and ground with a 170 mesh had the best adsorption capacity, significantly decreasing the CO2 concentration to 0.836%. At room temperature and atmospheric pressure, the Moso-bamboo-based porous charcoal exhibited much better CO2 adsorption capacity compared to that of commercially available 350-mesh activated carbon. PMID:25225639

  12. Charcoal produced by prescribed fire increases dissolved organic carbon and soil microbial activity

    NASA Astrophysics Data System (ADS)

    Poon, Cheryl; Jenkins, Meaghan; Bell, Tina; Adams, Mark

    2014-05-01

    In Australian forests fire is an important driver of carbon (C) storage. When biomass C is combusted it is transformed into vegetation residue (charcoal) and deposited in varying amounts and forms onto soil surfaces. The C content of charcoal is high but is largely in a chemically stable form of C, which is highly resistance to microbial decomposition. We conducted two laboratory incubations to examine the influence of charcoal on soil microbial activity as indicated by microbial respiration. Seven sites were chosen in mixed species eucalypt forest in Victoria, Australia. Soil was sampled prior to burning to minimise the effects of heating or addition of charcoal during the prescribed burn. Charcoal samples were collected from each site after the burn, homogenised and divided into two size fractions. Prior to incubation, soils were amended with the two size fractions (<1 and 1-4.75 mm) and at two rates of amount (2.5 and 5% by soil dry weight). Charcoal-amended soils were incubated in the laboratory for 86 d, microbial respiration was measured nine times at day 1, 3, 8, 15, 23, 30, 45, 59 and 86 d. We found that addition of charcoal resulted in faster rates of microbial respiration compared to unamended soil. Fastest rates of microbial respiration in all four treatments were measured 1 d after addition of charcoal (up to 12 times greater than unamended soil). From 3 to 8 d, respiration rates in all four treatments decreased and only treatments with greater charcoal addition (5%) remained significantly faster than unamended soil. From 15 d to 86 d, all treatments had respiration rates similar to unamended soil. Overall, adding greater amount of charcoal (5%) resulted in a larger cumulative amount of CO2 released over the incubation period when compared to unamended soil. The second laboratory incubation focused on the initial changes in soil nutrient and microbial respiration after addition of charcoal over a 72 h period. Charcoal (<2 mm) was added at rate of 5% to

  13. Molecular Marker Approach on Characterizing and Quantifying Charcoal in Environmental Media

    NASA Astrophysics Data System (ADS)

    Kuo, L.; Herbert, B. E.; Louchouarn, P.

    2006-12-01

    Black carbon (BC) is widely distributed in natural environments including soils, sediments, freshwater, seawater and the atmosphere. It is produced mostly from the incomplete combustion of fossil fuels and vegetation. In recent years, increasing attention has been given to BC due to its potential influence in many biogeochemical processes. In the environment, BC exists as a continuum ranging from partly charred plant materials, charcoal residues to highly condensed soot and graphite particles. The heterogeneous nature of black carbon means that BC is always operationally-defined, highlighting the need for standard methods that support data comparisons. Unlike soot and graphite that can be quantified with well-established methods, it is difficult to directly quantify charcoal in geologic media due to its chemical and physical heterogeneity. Most of the available charcoal quantification methods detect unknown fractions of the BC continuum. To specifically identify and quantify charcoal in soils and sediments, we adopted and validated an innovative molecular marker approach that quantifies levoglucosan, a pyrogenic derivative of cellulose, as a proxy of charcoal. Levoglucosan is source-specific, stable and is able to be detected at low concentrations using gas chromatograph-mass spectrometer (GC-MS). In the present study, two different plant species, honey mesquite and cordgrass, were selected as the raw materials to synthesize charcoals. The lab-synthesize charcoals were made under control conditions to eliminate the high heterogeneity often found in natural charcoals. The effects of two major combustion factors, temperature and duration, on the yield of levoglucosan were characterized in the lab-synthesize charcoals. Our results showed that significant levoglucosan production in the two types of charcoal was restricted to relatively low combustion temperatures (150-350 degree C). The combustion duration did not cause significant differences in the yield of

  14. Towards an improvement of carbon accounting for wildfires: incorporation of charcoal production into carbon emission models

    NASA Astrophysics Data System (ADS)

    Doerr, Stefan H.; Santin, Cristina; de Groot, Bill

    2015-04-01

    Every year fires release to the atmosphere the equivalent to 20-30% of the carbon (C) emissions from fossil fuel consumption, with future emissions from wildfires expected to increase under a warming climate. Critically, however, part of the biomass C affected by fire is not emitted during burning, but converted into charcoal, which is very resistant to environmental degradation and, thus, contributes to long-term C sequestration. The magnitude of charcoal production from wildfires as a long-term C sink remains essentially unknown and, to the date, charcoal production has not been included in wildfire emission and C budget models. Here we present complete inventories of charcoal production in two fuel-rich, but otherwise very different ecosystems: i) a boreal conifer forest (experimental stand-replacing crown fire; Canada, 2012) and a dry eucalyptus forest (high-intensity fuel reduction burn; Australia 2014). Our data show that, when considering all the fuel components and quantifying all the charcoal produced from each (i.e. bark, dead wood debris, fine fuels), the overall amount of charcoal produced is significant: up to a third of the biomass C affected by fire. These findings indicate that charcoal production from wildfires could represent a major and currently unaccounted error in the estimation of the effects of wildfires in the global C balance. We suggest an initial approach to include charcoal production in C emission models, by using our case study of a boreal forest fire and the Canadian Fire Effects Model (CanFIRE). We also provide recommendations of how a 'conversion factor' for charcoal production could be relatively easily estimated when emission factors for different types of fuels and fire conditions are experimentally obtained. Ultimately, this presentation is a call for integrative collaboration between the fire emission modelling community and the charcoal community to work together towards the improvement of C accounting for wildfires.

  15. Towards an inventory of historic charcoal production fields in Brandenburg, Germany

    NASA Astrophysics Data System (ADS)

    Schneider, Anna; Takla, Melanie; Raab, Alexandra; Raab, Thomas; Bonhage, Alexander; Hirsch, Florian; Rösler, Horst

    2015-04-01

    The historic production of charcoal is an important component of the late Holocene fire history for many landscapes. Charcoal production can have numerous effects on ecosystems, e.g., through changes in forest area and structure, or through the effects of pyrolysis, charcoal and ash addition to soils. To assess such effects, it is necessary to understand the spatial extent and patterns of historic charcoal production, which has so far hardly been approached for the Northern European Lowlands. In the forefield of the open-cast mine Jänschwalde (north of Cottbus, Germany), archaeological excavations have revealed one of the largest charcoal production fields described so far. For this area, we applied and evaluated different methods for mapping the spatial distribution of charcoal kiln remains. Based on our results from this exceptionally well-described charcoal production field, we attempted to detect and map other large occurrences of charcoal kiln remains in the state of Brandenburg. For the mine forefield, archaeological excavations provide certain and exact information on kiln site location and geometry. Using airborne laser scanning elevation models, the mapping of kiln sites could be extended to areas beyond the mine forefield, using a manual digitization for thorough mapping in forest areas north of Cottbus, and an automated mapping approach for detection of kiln sites for additional areas in Brandenburg. Potential areas of large-scale production were identified in a GIS-based analysis of environmental and historic data. By manual digitization from Shaded Relief Maps, more than 5000 kiln sites in an area of 32 km2 were detected in the Jänschwalde mine forefield. First results of mapping for larger areas indicate similar densities, but smaller diameters of kiln sites in other charcoal production fields; and show that charcoal production is a so far underestimated component of the land use history in many parts of the Northern European Lowlands.

  16. Comparative studies on thermochemical characterization of corn stover pretreated by white-rot and brown-rot fungi.

    PubMed

    Zeng, Yelin; Yang, Xuewei; Yu, Hongbo; Zhang, Xiaoyu; Ma, Fuying

    2011-09-28

    The effects of white-rot and brown-rot fungal pretreatment on the chemical composition and thermochemical conversion of corn stover were investigated. Fungus-pretreated corn stover was analyzed by Fourier transform infrared spectroscopy and X-ray diffraction analysis to characterize the changes in chemical composition. Differences in thermochemical conversion of corn stover after fungal pretreatment were investigated using thermogravimetric and pyrolysis analysis. The results indicated that the white-rot fungus Irpex lacteus CD2 has great lignin-degrading ability, whereas the brown-rot fungus Fomitopsis sp. IMER2 preferentially degrades the amorphous regions of the cellulose. The biopretreatment favors thermal decomposition of corn stover. The weight loss of IMER2-treated acid detergent fiber became greater, and the oil yield increased from 32.7 to 50.8%. After CD2 biopretreatment, 58% weight loss of acid detergent lignin was achieved and the oil yield increased from 16.8 to 26.8%.

  17. Association mapping in sunflower for sclerotinia head rot resistance

    PubMed Central

    2012-01-01

    Background Sclerotinia Head Rot (SHR) is one of the most damaging diseases of sunflower in Europe, Argentina, and USA, causing average yield reductions of 10 to 20 %, but leading to total production loss under favorable environmental conditions for the pathogen. Association Mapping (AM) is a promising choice for Quantitative Trait Locus (QTL) mapping, as it detects relationships between phenotypic variation and gene polymorphisms in existing germplasm without development of mapping populations. This article reports the identification of QTL for resistance to SHR based on candidate gene AM. Results A collection of 94 sunflower inbred lines were tested for SHR under field conditions using assisted inoculation with the fungal pathogen Sclerotinia sclerotiorum. Given that no biological mechanisms or biochemical pathways have been clearly identified for SHR, 43 candidate genes were selected based on previous transcript profiling studies in sunflower and Brassica napus infected with S. sclerotiorum. Associations among SHR incidence and haplotype polymorphisms in 16 candidate genes were tested using Mixed Linear Models (MLM) that account for population structure and kinship relationships. This approach allowed detection of a significant association between the candidate gene HaRIC_B and SHR incidence (P < 0.01), accounting for a SHR incidence reduction of about 20 %. Conclusions These results suggest that AM will be useful in dissecting other complex traits in sunflower, thus providing a valuable tool to assist in crop breeding. PMID:22708963

  18. Insights Into Triticum aestivum Seedling Root Rot Caused by Fusarium graminearum.

    PubMed

    Wang, Qing; Vera Buxa, Stefanie; Furch, Alexandra; Friedt, Wolfgang; Gottwald, Sven

    2015-12-01

    Fusarium graminearum is one of the most common and potent fungal pathogens of wheat (Triticum aestivum), known for causing devastating spike infections and grain yield damage. F. graminearum is a typical soil-borne pathogen that builds up during consecutive cereal cropping. Speculation on systemic colonization of cereals by F. graminearum root infection have long existed but have not been proven. We have assessed the Fusarium root rot disease macroscopically in a diverse set of 12 wheat genotypes and microscopically in a comparative study of two genotypes with diverging responses. Here, we show a 'new' aspect of the F. graminearum life cycle, i.e., the head blight fungus uses a unique root-infection strategy with an initial stage typical for root pathogens and a later stage typical for spike infection. Root colonization negatively affects seedling development and leads to systemic plant invasion by tissue-adapted fungal strategies. Another major outcome is the identification of partial resistance to root rot. Disease severity assessments and histological examinations both demonstrated three distinct disease phases that, however, proceeded differently in resistant and susceptible genotypes. Soil-borne inoculum and root infection are considered significant components of the F. graminearum life cycle with important implications for the development of new strategies of resistance breeding and disease control.

  19. Genetic parameters and correlations of collar rot resistance with important biochemical and yield traits in opium poppy (Papaver somniferum L.).

    PubMed

    Trivedi, Mala; Tiwari, Rajesh K; Dhawan, Om P

    2006-01-01

    Collar rot, caused by Rhizoctonia solani Kühn, is one of the most severe fungal diseases of opium poppy. In this study, heritability, genetic advance and correlation for 10 agronomic, 1 physiological, 3 biochemical and 1 chemical traits with disease severity index (DSI) for collar rot were assessed in 35 accessions of opium poppy. Most of the economically important characters, like seed and capsule straw yield per plant, oil and protein content of seeds, peroxidase activity in leaves, morphine content of capsule straw and DSI for collar rot showed high heritability as well as genetic advance. Highly significant negative correlation between DSI and seed yield clearly shows that as the disease progresses in plants, seed yield declines, chiefly due to premature death of infected plants as well as low seed and capsule setting in the survived population of susceptible plants. Similarly, a highly significant negative correlation between peroxidase activity and DSI indicated that marker-assisted selection of disease-resistant plants based on high peroxidase activity would be effective and survived susceptible plants could be removed from the population to stop further spread.

  20. Combined Effects of Soil Biotic and Abiotic Factors, Influenced by Sewage Sludge Incorporation, on the Incidence of Corn Stalk Rot

    PubMed Central

    Fortes, Nara Lúcia Perondi; Navas-Cortés, Juan A; Silva, Carlos Alberto; Bettiol, Wagner

    2016-01-01

    The objectives of this study were to evaluate the combined effects of soil biotic and abiotic factors on the incidence of Fusarium corn stalk rot, during four annual incorporations of two types of sewage sludge into soil in a 5-years field assay under tropical conditions and to predict the effects of these variables on the disease. For each type of sewage sludge, the following treatments were included: control with mineral fertilization recommended for corn; control without fertilization; sewage sludge based on the nitrogen concentration that provided the same amount of nitrogen as in the mineral fertilizer treatment; and sewage sludge that provided two, four and eight times the nitrogen concentration recommended for corn. Increasing dosages of both types of sewage sludge incorporated into soil resulted in increased corn stalk rot incidence, being negatively correlated with corn yield. A global analysis highlighted the effect of the year of the experiment, followed by the sewage sludge dosages. The type of sewage sludge did not affect the disease incidence. A multiple logistic model using a stepwise procedure was fitted based on the selection of a model that included the three explanatory parameters for disease incidence: electrical conductivity, magnesium and Fusarium population. In the selected model, the probability of higher disease incidence increased with an increase of these three explanatory parameters. When the explanatory parameters were compared, electrical conductivity presented a dominant effect and was the main variable to predict the probability distribution curves of Fusarium corn stalk rot, after sewage sludge application into the soil. PMID:27176597

  1. Soil charcoal from the plains to tundra in the Colorado Front Range

    NASA Astrophysics Data System (ADS)

    Sanford, R. L.; Licata, C.

    2010-12-01

    Throughout the forests of the central Rockies, soil charcoal from Holocene wildfires has been produced in response to wildland natural fire regimes. The extent and spatial distribution of soil charcoal production is poorly documented in this region, especially with regard to forests and shrublands at different elevations. Soil charcoal is a super-passive C pool derived from woody biomass that can be sequestered for millennia in forest soils. Recent research indicates that soil charcoal may promote enhanced soil fertility. Additionally, soil charcoal is an often overlooked component of soil C mass and flux. We hypothesize that differences in forest and shrubland fire regimes over the millennia have resulted in different soil charcoal amounts. Geospatial data were used to locate random sample plots in foothills shrublands (Cercocarpus montanus), and four forest types; ponderosa pine (Pinus ponderosa), Douglas-fir (Pseudotsuga menziesii), lodgepole pine (Pinus contorta) and spruce-fir (Picea engelmannii - Abies lasiocarpa). Sample plots were stratified to occur with the mid 200 m elevation band of each vegetation type with east aspect, and 10-30% slope. Soils were sampled widely at 0-10 cm depth and analyzed for total soil C and soil charcoal C via chemical digestion and dry combustion techniques. Overall, soil charcoal is four times more abundant in spruce-fir forests than in foothills shrublands (1.9 +/- 0.92 Mg C/ha versus 0.54 +/- 0.44 Mg C/ha). Soil charcoal is also abundant in lodgepole pine and ponderosa pine soils (1.4 +/- 1.02 Mg C/ha and 1.4 +/- 0.54 Mg C/ha respectively) but is less plentiful in Douglas-fir soils (1.0 +/- 0.67). Spruce-fir forests have the most above ground biomass, slower decomposition rates and a less frequent mean fire return interval than the other four forests, hence it makes sense that high per-fire rates of charcoal production would occur in the spruce-fir zone, given large amounts of surface fuels at the time of fire. In contrast

  2. GammaScorpion: mobile gamma-ray tomography system for early detection of basal stem rot in oil palm plantations

    NASA Astrophysics Data System (ADS)

    Abdullah, Jaafar; Hassan, Hearie; Shari, Mohamad Rabaie; Mohd, Salzali; Mustapha, Mahadi; Mahmood, Airwan Affendi; Jamaludin, Shahrizan; Ngah, Mohd Rosdi; Hamid, Noor Hisham

    2013-03-01

    Detection of the oil palm stem rot disease Ganoderma is a major issue in estate management and production in Malaysia. Conventional diagnostic techniques are difficult and time consuming when using visual inspection, and destructive and expensive when based on the chemical analysis of root or stem tissue. As an alternative, a transportable gamma-ray computed tomography system for the early detection of basal stem rot (BSR) of oil palms due to Ganoderma was developed locally at the Malaysian Nuclear Agency, Kajang, Malaysia. This system produces high quality tomographic images that clearly differentiate between healthy and Ganoderma infected oil palm stems. It has been successfully tested and used to detect the extent of BSR damage in oil palm plantations in Malaysia without the need to cut down the trees. This method offers promise for in situ inspection of oil palm stem diseases compared to the more conventional methods.

  3. [Caring for families of charcoal-burning suicide patients].

    PubMed

    Pien, Feng-Chen; Feng, Hsin-Pei; Tzeng, Wen-Chii

    2013-12-01

    Charcoal-burning is the second major cause of suicide death in Taiwan. Predicting the variable damage and sequelae in this suicide mode is difficult due to the rapid combination of carbon monoxide with red blood cells. Delayed neuropsychological sequelae (DNS) may result in significantly extended recovery times, causing additional stress to the family. Nurses may help increase family understanding and support and guide family members to more positive intra-family interactions, shared perspectives on the recovery process, and resource seeking behavior by depicting subsequent family life and helping the entire family develop coping strategies those allow all members to effect cognitive, emotional and behavioral change. This result may help families of attempted suicide individuals recover successfully.

  4. Integrated options for the management of black root rot of strawberry caused by Rhizoctonia solani Kuhn.

    PubMed

    Asad-Uz-Zaman, Md; Bhuiyan, Mohammad Rejwan; Khan, Mohammad Ashik Iqbal; Alam Bhuiyan, Md Khurshed; Latif, Mohammad Abdul

    2015-02-01

    An investigation was made to manage strawberry black root rot caused by Rhizoctonia solani (R. solani) through the integration of Trichoderma harzianum (T. harzianum) isolate STA7, mustard oil cake and Provax 200. A series of preliminary experiments were conducted to select a virulent isolate of R. solani, an effective isolate of T. harzianum, a suitable organic amendment, and a suitable fungicide before setting the experiment for integration. The pathogenicity of the selected four isolates of R. solani was evaluated against strawberry and isolate SR1 was selected as the test pathogen due to its highest virulent (95.47% mortality) characteristics. Among the 20 isolates of T. harzianum, isolate STA7 showed maximum inhibition (71.97%) against the test pathogen (R. solani). Among the fungicides, Provax-200 was found to be more effective at lowest concentration (100 ppm) and highly compatible with Trichoderma isolates STA7. In the case of organic amendments, maximum inhibition (59.66%) of R. solani was obtained through mustard oil cake at the highest concentration (3%), which was significantly superior to other amendments. Minimum percentages of diseased roots were obtained with pathogen (R. solani)+Trichoderma+mustard oil cake+Provax-200 treatment, while the highest was observed with healthy seedlings with a pathogen-inoculated soil. In the case of leaf and fruit rot diseases, significantly lowest infected leaves as well as fruit rot were observed with a pathogen+Trichoderma+mustard oil cake+Provax-200 treatment in comparison with the control. A similar trend of high effectiveness was observed by the integration of Trichoderma, fungicide and organic amendments in controlling root rot and fruit diseases of strawberry. Single application of Trichoderma isolate STA7, Provax 200 or mustard oil cake did not show satisfactory performance in terms of disease-free plants, but when they were applied in combination, the number of healthy plants increased significantly. The

  5. Integrated options for the management of black root rot of strawberry caused by Rhizoctonia solani Kuhn.

    PubMed

    Asad-Uz-Zaman, Md; Bhuiyan, Mohammad Rejwan; Khan, Mohammad Ashik Iqbal; Alam Bhuiyan, Md Khurshed; Latif, Mohammad Abdul

    2015-02-01

    An investigation was made to manage strawberry black root rot caused by Rhizoctonia solani (R. solani) through the integration of Trichoderma harzianum (T. harzianum) isolate STA7, mustard oil cake and Provax 200. A series of preliminary experiments were conducted to select a virulent isolate of R. solani, an effective isolate of T. harzianum, a suitable organic amendment, and a suitable fungicide before setting the experiment for integration. The pathogenicity of the selected four isolates of R. solani was evaluated against strawberry and isolate SR1 was selected as the test pathogen due to its highest virulent (95.47% mortality) characteristics. Among the 20 isolates of T. harzianum, isolate STA7 showed maximum inhibition (71.97%) against the test pathogen (R. solani). Among the fungicides, Provax-200 was found to be more effective at lowest concentration (100 ppm) and highly compatible with Trichoderma isolates STA7. In the case of organic amendments, maximum inhibition (59.66%) of R. solani was obtained through mustard oil cake at the highest concentration (3%), which was significantly superior to other amendments. Minimum percentages of diseased roots were obtained with pathogen (R. solani)+Trichoderma+mustard oil cake+Provax-200 treatment, while the highest was observed with healthy seedlings with a pathogen-inoculated soil. In the case of leaf and fruit rot diseases, significantly lowest infected leaves as well as fruit rot were observed with a pathogen+Trichoderma+mustard oil cake+Provax-200 treatment in comparison with the control. A similar trend of high effectiveness was observed by the integration of Trichoderma, fungicide and organic amendments in controlling root rot and fruit diseases of strawberry. Single application of Trichoderma isolate STA7, Provax 200 or mustard oil cake did not show satisfactory performance in terms of disease-free plants, but when they were applied in combination, the number of healthy plants increased significantly. The

  6. Repression of hla by rot is dependent on sae in Staphylococcus aureus.

    PubMed

    Li, Dongmei; Cheung, Ambrose

    2008-03-01

    The regulatory locus sae is a two-component system in Staphylococcus aureus that regulates many important virulence factors, including alpha-toxin (encoded by hla) at the transcriptional level. The SarA homologs Rot and SarT were previously shown to be repressors of hla in selected S. aureus backgrounds. To delineate the interaction of rot and sae and the contribution of sarT to hla expression, an assortment of rot and sae isogenic single mutants, a rot sae double mutant, and a rot sae sarT markerless triple mutant were constructed from wild-type strain COL. Using Northern blot analysis and transcriptional reporter gene green fluorescent protein, fusion, and phenotypic assays, we found that the repression of hla by rot is dependent on sae. A rot sae sarT triple mutant was not able to rescue the hla defect of the rot sae double mutant. Among the three sae promoters, the distal sae P3 promoter is the strongest in vitro. Interestingly, the sae P3 promoter activities correlate with hla expression in rot, rot sae, and rot sae sarT mutants of COL. Transcriptional study has also shown that rot repressed sae, especially at the sae P3 promoter. Collectively, our data implicated the importance of sae in the rot-mediated repression of hla in S. aureus.

  7. The impact of charcoal production on forest degradation: a case study in Tete, Mozambique

    NASA Astrophysics Data System (ADS)

    Sedano, F.; Silva, J. A.; Machoco, R.; Meque, C. H.; Sitoe, A.; Ribeiro, N.; Anderson, K.; Ombe, Z. A.; Baule, S. H.; Tucker, C. J.

    2016-09-01

    Charcoal production for urban energy consumption is a main driver of forest degradation in sub Saharan Africa. Urban growth projections for the continent suggest that the relevance of this process will increase in the coming decades. Forest degradation associated to charcoal production is difficult to monitor and commonly overlooked and underrepresented in forest cover change and carbon emission estimates. We use a multitemporal dataset of very high-resolution remote sensing images to map kiln locations in a representative study area of tropical woodlands in central Mozambique. The resulting maps provided a characterization of the spatial extent and temporal dynamics of charcoal production. Using an indirect approach we combine kiln maps and field information on charcoal making to describe the magnitude and intensity of forest degradation linked to charcoal production, including aboveground biomass and carbon emissions. Our findings reveal that forest degradation associated to charcoal production in the study area is largely independent from deforestation driven by agricultural expansion and that its impact on forest cover change is in the same order of magnitude as deforestation. Our work illustrates the feasibility of using estimates of urban charcoal consumption to establish a link between urban energy demands and forest degradation. This kind of approach has potential to reduce uncertainties in forest cover change and carbon emission assessments in sub-Saharan Africa.

  8. Comparison of activated charcoal and ipecac syrup in prevention of drug absorption.

    PubMed

    Neuvonen, P J; Vartiainen, M; Tokola, O

    1983-01-01

    The efficacy of activated charcoal and ipecac syrup in the prevention of drug absorption was studied in 6 healthy adult volunteers, using a randomized, cross-over design. Paracetamol 1000 mg, tetracycline 500 mg and aminophylline 350 mg were ingested on an empty stomach with 100 ml water. Then, after 5 or 30 min, the subjects ingested, either activated charcoal suspension (50 g charcoal), syrup of ipecac, or, only after 5 min, water 300 ml. Activated charcoal, given either after 5 or 30 min, significantly (p less than 0.01 or less 0.05) reduced the absorption of these 3 drugs measured, for example as AUC0-24 h. Syrup of ipecac caused emesis on each occasion, with a mean delay of 15 min. When ipecac was given 5 min after the drugs, its effect on absorption was significant, but when it was given after 30 min only the absorption of tetracycline was reduced. Activated charcoal was significantly (p less than 0.05) more effective than ipecac in reducing drug absorption when given at the same time points. In cases of acute intoxication, depending on the quality and quantity of the drugs ingested, the relative efficacy of charcoal and ipecac may be somewhat different from that observed in the present study. Despite its emetic action, however, ipecac syrup is not very effective in preventing drug absorption and, in general, activated charcoal should also be given after induced emesis or gastric lavage. PMID:6134626

  9. Diseases of Pacific Coast conifers. Agriculture handbook

    SciTech Connect

    Scharpf, R.F.

    1993-06-01

    The handbook provides basic information needed to identify the common diseases of Pacific Coast conifers. Hosts, distribution, disease cycles, and identifying characteristics are described for more than 150 diseases, including cankers, diebacks, galls, rusts, needle diseases, root diseases, mistletoes, and rots. Diseases in which abiotic factors are involved are also described. For some groups of diseases, a descriptive key to field identification is included.

  10. What can we tell from particle morphology in Mesozoic charcoal assemblages?

    NASA Astrophysics Data System (ADS)

    Crawford, Alastair; Belcher, Claire

    2015-04-01

    Sedimentary charcoal particles provide a valuable record of palaeofire activity on both human and geological timescales. Charcoal is both an unambiguous indicator of wildfire, and a means of preservation of plant material in an inert form; thus it records not only the occurrence and extent of wildfire, but also the species affected. While scanning electron microscopy can be usefully employed for precise taxonomic identification of charcoals, the time and cost associated with this limit the extent to which the technique is employed. Morphometric analysis of mesocharcoal particles (c. 125-1000 µm) potentially provides a simple method for obtaining useful information from optical microscopy images. Grass fires have been shown to produce mesocharcoal particles with a higher length-to-width ratio than woodland fuel sources. In Holocene archives, aspect ratio measurements are thus used to infer the broad taxonomic affinity of the burned vegetation. Since Mesozoic charcoals display similarly heterogeneous morphologies, we investigate whether there is a similar potential to infer the broad botanical affinities of Mesozoic charcoal assemblages from simple morphological metrics. We have used image analysis to analyse a range of Jurassic and Cretaceous sedimentary rocks representing different vegetation communities and depositional environments, and also to determine the range of charcoal particle morphologies which can be produced from different modern taxa under laboratory conditions. We find that modern charcoals break down into mesocharcoal particles of very variable aspect ratio, and this appears to be dependent on taxonomic position. Our analysis of fragmented laboratory-produced charcoals indicates that pteridophytes produce much more elongate particles than either conifers or non-grass angiosperms. We suggest that for charcoal assemblages that predate the evolution of grasses, high average aspect ratios may be a useful indicator of the burning of a pteridophyte

  11. Charcoal emissions as a source of CO and carcinogenic PAH in mainstream narghile waterpipe smoke.

    PubMed

    Monzer, Bassel; Sepetdjian, Elizabeth; Saliba, Najat; Shihadeh, Alan

    2008-09-01

    Burning charcoal is normally placed atop the tobacco to smoke the narghile waterpipe. We investigated the importance of charcoal as a toxicant source in the mainstream smoke, with particular attention to two well-known charcoal emissions: carbon monoxide (CO) and polyaromatic hydrocarbons (PAH). CO and PAH yields were compared when a waterpipe was machine smoked using charcoal and using an electrical heating element. The electrical heating element was designed to produce spatial and temporal temperature distributions similar to those measured using charcoal. With a popular type of ma'assel tobacco mixture, and using a smoking regimen consisting of 105 puffs of 530ml volume spaced 17s apart, it was found that approximately 90% of the CO and 75-92% of the 4- and 5-membered ring PAH compounds originated in the charcoal. Greater than 95% of the benzo(a)pyrene in the smoke was attributable to the charcoal. It was also found that the relative proportions of individual PAH species, the "PAH fingerprint", of the mainstream smoke were highly correlated to those extracted from the unburned charcoal (R(2)>0.94). In contrast, there was no correlation between the PAH fingerprint of the electrically heated and charcoal-heated conditions (R(2)<0.02). In addition to inhaling toxicants transferred from the tobacco, such as nicotine, "tar", and nitrosamines, waterpipe smokers thus also inhale large quantities of combustion-generated toxicants. This explains why, despite the generally low temperatures attained in the narghile tobacco, large quantities of CO and PAH have been found in the smoke. PMID:18573302

  12. Charcoal addition to soils in NE England: a carbon sink with environmental co-benefits?

    PubMed

    Bell, M J; Worrall, F

    2011-04-01

    Interest in the application of biochar (charcoal produced during the pyrolysis of biomass) to agricultural land is increasing across the world, recognised as a potential way to capture and store atmospheric carbon. Its interest is heightened by its potential co-benefits for soil quality and fertility. The majority of research has however been undertaken in tropical rather than temperate regions. This study assessed the potential for lump-wood charcoal addition (as a substitute for biochar) to soil types which are typically under arable and forest land-use in North East England. The study was undertaken over a 28 week period and found: i) No significant difference in net ecosystem respiration (NER) between soils containing charcoal and those without, other than in week 1 of the trial. ii) A significantly higher dissolved organic carbon (DOC) flux from soils containing large amounts of charcoal than from those untreated, when planted with ryegrass. iii) That when increased respiration or DOC loss did occur, neither was sufficiently large to alter the carbon sink benefits of charcoal application. iv) That charcoal incorporation resulted in a significantly lower nitrate flux in soil leachate from mineral soils. v) That charcoal incorporation caused significant increases in soil pH, from 6.98 to 7.22 on bare arable soils when 87,500 kg charcoal/ha was applied. Consideration of both the carbon sink and environmental benefits observed here suggests that charcoal application to temperate soils typical of North East England should be considered as a method of carbon sequestration. Before large scale land application is encouraged, further large scale trials should be undertaken to confirm the positive results of this research.

  13. Pseudomonas induces salinity tolerance in cotton (Gossypium hirsutum) and resistance to Fusarium root rot through the modulation of indole-3-acetic acid

    PubMed Central

    Egamberdieva, Dilfuza; Jabborova, Dilfuza; Hashem, Abeer

    2015-01-01

    Abiotic stresses cause changes in the balance of phytohormones in plants and result in inhibited root growth and an increase in the susceptibility of plants to root rot disease. The aim of this work was to ascertain whether microbial indole-3-acetic acid (IAA) plays a role in the regulation of root growth and microbially mediated control of root rot of cotton caused by Fusarium solani. Seed germination and seedling growth were improved by both NaCl and Mg2SO4 (100 mM) solutions when treated with root-associated bacterial strains Pseudomonas putida R4 and Pseudomonas chlororaphis R5, which are able to produce IAA. These bacterial strains were also able to reduce the infection rate of cotton root rot (from 70 to 39%) caused by F. solani under gnotobiotic conditions. The application of a low concentration of IAA (0.01 and 0.001 μg/ml) stimulated plant growth and reduced disease incidence caused by F. solani (from 70 to 41–56%, respectively). Shoot and root growth and dry matter increased significantly and disease incidence was reduced by bacterial inoculants in natural saline soil. These results suggest that bacterial IAA plays a major role in salt stress tolerance and may be involved in induced resistance against root rot disease of cotton. PMID:26587006

  14. The Oil of Matico (Piper aduncum L.) an Alternative for the Control of Cacao Frosty Pod Rot (Moniliophthora roreri) in Peru

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The cacao production in many Latin American countries is significantly reduced by frosty pod rot disease (Moniliophthora roreri) and yield reductions are to the extent of over 90% in many cases. The strategies of control includes: phytosanitation, genetic resistance, chemical and biological control....

  15. Apple ring rot-responsive putative microRNAs revealed by high-throughput sequencing in Malus × domestica Borkh.

    PubMed

    Yu, Xin-Yi; Du, Bei-Bei; Gao, Zhi-Hong; Zhang, Shi-Jie; Tu, Xu-Tong; Chen, Xiao-Yun; Zhang, Zhen; Qu, Shen-Chun

    2014-08-01

    MicroRNAs (miRNAs) are small non-coding RNAs, which silence target mRNA via cleavage or translational inhibition to function in regulating gene expression. MiRNAs act as important regulators of plant development and stress response. For understanding the role of miRNAs responsive to apple ring rot stress, we identified disease-responsive miRNAs using high-throughput sequencing in Malus × domestica Borkh.. Four small RNA libraries were constructed from two control strains in M. domestica, crabapple (CKHu) and Fuji Naga-fu No. 6 (CKFu), and two disease stress strains, crabapple (DSHu) and Fuji Naga-fu No. 6 (DSFu). A total of 59 miRNA families were identified and five miRNAs might be responsive to apple ring rot infection and validated via qRT-PCR. Furthermore, we predicted 76 target genes which were regulated by conserved miRNAs potentially. Our study demonstrated that miRNAs was responsive to apple ring rot infection and may have important implications on apple disease resistance.

  16. Identification, characterization and mycotoxigenic ability of Alternaria spp. causing core rot of apple fruit in Greece.

    PubMed

    Ntasiou, Panagiota; Myresiotis, Charalampos; Konstantinou, Sotiris; Papadopoulou-Mourkidou, Euphemia; Karaoglanidis, George S

    2015-03-16

    Alternaria core rot is a major postharvest disease of apple fruit in several countries of the world, including Greece. The study was conducted aiming to identify the disease causal agents at species level, investigate the aggressiveness of Alternaria spp. isolates and the susceptibility of different apple varieties and determine the mycotoxigenic potential of Alternaria spp. isolates from apple fruit. Seventy-five Alternaria spp. isolates obtained from apple fruit showing core rot symptoms were identified as either Alternaria tenuissima or Alternaria arborescens at frequencies of 89.3 and 11.7%, respectively, based on the sequence of endopolygalacturonase (EndoPG) gene. Artificial inoculations of fruit of 4 different varieties (Fuji, Golden Delicious, Granny Smith and Red Delicious) and incubation at two different temperatures (2 and 25°C) showed that fruit of Fuji variety were the most susceptible and fruit of Golden Delicious the most resistant to both pathogens. In addition, the production of 3 mycotoxins, alternariol (AOH), alternariol monomethyl ether (AME) and tentoxin (TEN) was investigated in 30 isolates of both species. Mycotoxin determination was conducted both in vitro, on artificial nutrient medium and in vivo on artificially inoculated apple fruit, using a high performance liquid chromatography with diode array detector (HPLC-DAD). The results showed that most of the isolates of both species were able to produce all the 3 metabolites both in vivo and in vitro. On apple fruit A. tenuissima isolates produced more AOH than A. arborescens isolates, whereas the latter produced more TEN than the former. Such results indicate that Alternaria core rot represents a major threat of apple fruit production not only due to quantitative yield losses but also for qualitative deterioration of apple by-products.

  17. Specificity of monoclonal antibodies to strains of Dickeya sp. that cause bacterial heart rot of pineapple.

    PubMed

    Peckham, Gabriel D; Kaneshiro, Wendy S; Luu, Van; Berestecky, John M; Alvarez, Anne M

    2010-10-01

    During a severe outbreak of bacterial heart rot that occurred in pineapple plantations on Oahu, Hawaii, in 2003 and years following, 43 bacterial strains were isolated from diseased plants or irrigation water and identified as Erwinia chrysanthemi (now Dickeya sp.) by phenotypic, molecular, and pathogenicity assays. Rep-PCR fingerprint patterns grouped strains from pineapple plants and irrigation water into five genotypes (A-E) that differed from representatives of other Dickeya species, Pectobacterium carotovorum and other enteric saprophytes isolated from pineapple. Monoclonal antibodies produced following immunization of mice with virulent type C Dickeya sp. showed only two specificities. MAb Pine-1 (2D11G1, IgG1 with kappa light chain) reacted to all 43 pineapple/water strains and some reference strains (D. dianthicola, D. chrysanthemi, D. paradisiaca, some D. dadantii, and uncharacterized Dickeya sp.) but did not react to reference strains of D. dieffenbachiae, D. zeae, or one of the two Malaysian pineapple strains. MAb Pine-2 (2A7F2, IgG3 with kappa light chain) reacted to all type B, C, and D strains but not to any A or E strains or any reference strains except Dickeya sp. isolated from Malaysian pineapple. Pathogenicity tests showed that type C strains were more aggressive than type A strains when inoculated during cool months. Therefore, MAb Pine-2 distinguishes the more virulent type C strains from less virulent type A pineapple strains and type E water strains. MAbs with these two specificities enable development of rapid diagnostic tests that will distinguish the systemic heart rot pathogen from opportunistic bacteria associated with rotted tissues. Use of the two MAbs in field assays also permits the monitoring of a known subpopulation and provides additional decision tools for disease containment and management practices.

  18. Integrated management of foot rot of lentil using biocontrol agents under field condition.

    PubMed

    Hannan, M A; Hasan, M M; Hossain, I; Rahman, S M E; Ismail, Alhazmi Mohammed; Oh, Deog-Hwan

    2012-07-01

    The efficacy of cowdung, Bangladesh Institute of Nuclear Agriculture (BINA)-biofertilizer, and Bangladesh Agricultural University (BAU)-biofungicide, alone or in combination, was evaluated for controlling foot rot disease of lentil. The results exhibited that BINA-biofertilizer and BAUbiofungicide (peat soil-based Rhizobium leguminosarum and black gram bran-based Trichoderma harzianum) are compatible and have combined effects in controlling the pathogenic fungi Fusarium oxysporum and Sclerotium rolfsii, which cause the root rot of lentil. Cowdung mixing with soil (at 5 t/ha) during final land preparation and seed coating with BINA-biofertilizer and BAU-biofungicide (at 2.5% of seed weight) before sowing recorded 81.50% field emergence of lentil, which showed up to 19.85% higher field emergence over the control. Post-emergence deaths of plants due to foot rot disease were significantly reduced after combined seed treatment with BINA-biofertilizer and BAU-biofungicide. Among the treatments used, only BAU-biofungicide as the seed treating agent resulted in higher plant stand (84.82%). Use of BINA-biofertilizer and BAU-biofungicide as seed treating biocontrol agents and application of cowdung in the soil as an organic source of nutrient resulted in higher shoot and root lengths, and dry shoot and root weights of lentil. BINA-biofertilizer significantly increased the number of nodules per plant and nodules weight of lentil. Seeds treating with BAUbiofungicide and BINA-biofertilizer and soil amendment with cowdung increased the biomass production of lentil up to 75.56% over the control.

  19. Charcoal production in the Mopane woodlands of Mozambique: what are the trade-offs with other ecosystem services?

    PubMed

    Woollen, Emily; Ryan, Casey M; Baumert, Sophia; Vollmer, Frank; Grundy, Isla; Fisher, Janet; Fernando, Jone; Luz, Ana; Ribeiro, Natasha; Lisboa, Sá N

    2016-09-19

    African woodlands form a major part of the tropical grassy biome and support the livelihoods of millions of rural and urban people. Charcoal production in particular is a major economic activity, but its impact on other ecosystem services is little studied. To address this, our study collected biophysical and social datasets, which were combined in ecological production functions, to assess ecosystem service provision and its change under different charcoal production scenarios in Gaza Province, southern Mozambique. We found that villages with longer histories of charcoal production had experienced declines in wood suitable for charcoal, firewood and construction, and tended to have lower perceived availabilities of these services. Scenarios of future charcoal impacts indicated that firewood and woody construction services were likely to trade-off with charcoal production. However, even under the most extreme charcoal scenario, these services were not completely lost. Other provisioning services, such as wild food, medicinal plants and grass, were largely unaffected by charcoal production. To reduce the future impacts of charcoal production, producers must avoid increased intensification of charcoal extraction by avoiding the expansion of species and sizes of trees used for charcoal production. This is a major challenge to land managers and policymakers in the area.This article is part of the themed issue 'Tropical grassy biomes: linking ecology, human use and conservation'. PMID:27502380

  20. Charcoal production in the Mopane woodlands of Mozambique: what are the trade-offs with other ecosystem services?

    PubMed

    Woollen, Emily; Ryan, Casey M; Baumert, Sophia; Vollmer, Frank; Grundy, Isla; Fisher, Janet; Fernando, Jone; Luz, Ana; Ribeiro, Natasha; Lisboa, Sá N

    2016-09-19

    African woodlands form a major part of the tropical grassy biome and support the livelihoods of millions of rural and urban people. Charcoal production in particular is a major economic activity, but its impact on other ecosystem services is little studied. To address this, our study collected biophysical and social datasets, which were combined in ecological production functions, to assess ecosystem service provision and its change under different charcoal production scenarios in Gaza Province, southern Mozambique. We found that villages with longer histories of charcoal production had experienced declines in wood suitable for charcoal, firewood and construction, and tended to have lower perceived availabilities of these services. Scenarios of future charcoal impacts indicated that firewood and woody construction services were likely to trade-off with charcoal production. However, even under the most extreme charcoal scenario, these services were not completely lost. Other provisioning services, such as wild food, medicinal plants and grass, were largely unaffected by charcoal production. To reduce the future impacts of charcoal production, producers must avoid increased intensification of charcoal extraction by avoiding the expansion of species and sizes of trees used for charcoal production. This is a major challenge to land managers and policymakers in the area.This article is part of the themed issue 'Tropical grassy biomes: linking ecology, human use and conservation'.

  1. Charcoal production in the Mopane woodlands of Mozambique: what are the trade-offs with other ecosystem services?

    PubMed Central

    Baumert, Sophia; Vollmer, Frank; Grundy, Isla; Fisher, Janet; Fernando, Jone; Luz, Ana; Lisboa, Sá N.

    2016-01-01

    African woodlands form a major part of the tropical grassy biome and support the livelihoods of millions of rural and urban people. Charcoal production in particular is a major economic activity, but its impact on other ecosystem services is little studied. To address this, our study collected biophysical and social datasets, which were combined in ecological production functions, to assess ecosystem service provision and its change under different charcoal production scenarios in Gaza Province, southern Mozambique. We found that villages with longer histories of charcoal production had experienced declines in wood suitable for charcoal, firewood and construction, and tended to have lower perceived availabilities of these services. Scenarios of future charcoal impacts indicated that firewood and woody construction services were likely to trade-off with charcoal production. However, even under the most extreme charcoal scenario, these services were not completely lost. Other provisioning services, such as wild food, medicinal plants and grass, were largely unaffected by charcoal production. To reduce the future impacts of charcoal production, producers must avoid increased intensification of charcoal extraction by avoiding the expansion of species and sizes of trees used for charcoal production. This is a major challenge to land managers and policymakers in the area. This article is part of the themed issue ‘Tropical grassy biomes: linking ecology, human use and conservation’. PMID:27502380

  2. A charcoal sampling method and a gas chromatographic analytical procedure for carbon disulfide.

    PubMed

    McCammon, C S; Quinn, P M; Kupel, R E

    1975-08-01

    Research is reported concerning an acceptable method for sampling and analyzing samples for carbon disulfide. Test atmospheres of carbon disulfide were generated dynamically using the syringe injection method, ant the theoretical concetnration verified by a liquid absorbent, colorimetric method. The CS2 was adsorbed on charcoal tubes, eluted with benzene, and quantitated with a gas chromatography equipped with a sulfer flame photometric detector. The results compared with the colorimetris analysis. The sensitivity of this method is 1 mug on a charcoal tube. The charcoal tubes were also tested for breakthrough volumes, holding power vs time, and the effect of air transport and temperature cycles.

  3. Investigation on fixed bed column performance of fluoride adsorption by sugarcane charcoal.

    PubMed

    Mondal, N K; Bhaumik, R; Roy, P; Das, B; Datta, J K

    2013-11-01

    The present study explores the potentiality of sugarcane charcoal for fluoride removal from synthetic fluoride solution. Column adsorption experiments with respect to variation of flow rate, pH, initial concentration, and column depths were carried out. Sugarcane charcoal exhibited almost consistent scavenging capacity at various bed depths with a flow rate 4.34 ml min(-1). Maximum adsorption capacity of sugarcane charcoal was recorded 7.33 mg g(-1). The adsorption studies were simulated using Thomas and Bed depth service time model. Both the models consistently predict its characteristic parameters and describe the breakthrough profiles in the whole range of sorption process.

  4. Black carbon quantification in charcoal-enriched soils by differential scanning calorimetry

    NASA Astrophysics Data System (ADS)

    Hardy, Brieuc; Cornelis, Jean-Thomas; Leifeld, Jens

    2015-04-01

    Black carbon (BC), the solid residue of the incomplete combustion of biomass and fossil fuels, is ubiquitous in soil and sediments, fulfilling several environmental services such as long-term carbon storage. BC is a particularly important terrestrial carbon pool due to its large residence time compared to thermally unaltered organic matter, which is largely attributed to its aromatic structure. However, BC refers to a wide range of pyrogenic products from partly charred biomass to highly condensed soot, with a degree of aromaticity and aromatic condensation varying to a large extend across the BC continuum. As a result, BC quantification largely depends on operational definitions, with the extraction efficiency of each method varying across the entire BC range. In our study, we investigated the adequacy of differential scanning calorimetry (DSC) for the quantification of BC in charcoal-enriched soils collected in the topsoil of pre-industrial charcoal kilns in forest and cropland of Wallonia, Belgium, where charcoal residues are mixed to uncharred soil organic matter (SOM). We compared the results to the fraction of the total organic carbon (TOC) resisting to K2Cr2O7 oxidation, another simple method often used for BC measurement. In our soils, DSC clearly discriminates SOM from chars. SOM is less thermally stable than charcoal and shows a peak maximum around 295°C. In forest and agricultural charcoal-enriched soils, three peaks were attributed to the thermal degradation of BC at 395, 458 and 523°C and 367, 420 and 502 °C, respectively. In cropland, the amount of BC calculated from the DSC peaks is closely related (slope of the linear regression = 0.985, R²=0.914) to the extra organic carbon content measured at charcoal kiln sites relative to the charcoal-unaffected adjacent soils, which is a positive indicator of the suitability of DSC for charcoal quantification in soil. The first BC peak, which may correspond to highly degraded charcoal, contributes to a

  5. Ozone removal capability of a welding fume respirator containing activated charcoal

    SciTech Connect

    Johnston, A.R.; Dyrud, J.F.; Shih, Y.T. )

    1989-09-01

    Development of air purifying respirators for protection against ozone has been slowed by concerns about oxidation of charcoal and other available sorbents. The suitability of a charcoal sorbent for low concentrations of ozone was evaluated as a part of the development of a half-mask air purifying respirator designed for welding fumes and ozone. Testing of the respirator confirmed that charcoal can be a suitable sorbent for low levels of ozone. Where the respirator is properly selected, fit tested, and worn, respirator use against welding fumes and ozone at concentrations not exceeding 10 times the permissible exposure limit had been recommended.

  6. Ozone removal capability of a welding fume respirator containing activated charcoal.

    PubMed

    Johnston, A R; Dyrud, J F; Shih, Y T

    1989-09-01

    Development of air purifying respirators for protection against ozone has been slowed by concerns about oxidation of charcoal and other available sorbents. The suitability of a charcoal sorbent for low concentrations of ozone was evaluated as a part of the development of a half-mask air purifying respirator designed for welding fumes and ozone. Testing of the respirator confirmed that charcoal can be a suitable sorbent for low levels of ozone. Where the respirator is properly selected, fit tested, and worn, respirator use against welding fumes and ozone at concentrations not exceeding 10 times the permissible exposure limit had been recommended. PMID:2801512

  7. Quantitative relationships between different injury factors and development of brown rot caused by Monilinia fructigena in integrated and organic apple orchards.

    PubMed

    Holb, I J; Scherm, H

    2008-01-01

    In a 4-year study, the incidence of various types of injuries (caused by insects, birds, growth cracks, mechanical wounding, and other, unidentified factors) was assessed in relation to brown rot development (caused by Monilinia fructigena) on fruit of three apple cultivars (Prima, Jonathan, and Mutsu) in integrated and organic blocks of two apple orchards in Hungary. In addition, populations of male codling moths (Cydia pomonella) were monitored with pheromone traps season-long in both management systems. On average, injury incidence on fruit at harvest was 6.1 and 19.2% in the integrated and organic treatments, respectively. Insect injury, which was caused primarily by C. pomonella, had the highest incidence among the five injury types, accounting for 79.4% of the total injury by harvest in the organic blocks and 36.6% in the integrated blocks. Levels of all other injury types remained close to zero during most of the season, but the incidence of bird injury and growth cracks increased markedly in the final 3 to 5 weeks before harvest in both production systems. Brown rot developed more slowly and reached a lower incidence in the integrated (6.4% final incidence on average) compared with the organic blocks (20.1% average incidence). In addition, the disease developed later but attained higher levels as the cultivar ripening season increased from early-maturing Prima to late-maturing Mutsu. Overall, 94.3 to 98.7% of all injured fruit were also infected by M. fructigena, whereas the incidence of brown-rotted fruit without visible injury was very low (0.8 to 1.6%). Correlation coefficients (on a per plot basis) and association indices (on a per-fruit basis) were calculated between brown rot and the various injury types for two selected assessment dates 4 weeks preharvest and at harvest. At both dates, the strongest significant (P < 0.05) relationships were observed between brown rot and insect injury and between brown rot and the cumulative number of trapped C

  8. Control of storage rot by induction of plant defense mechanisms using jasmonic acid and salicylic acid

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Storage rots contribute to sugarbeet postharvest losses by consuming sucrose and producing carbohydrate impurities that increase sugar loss to molasses. Presently, storage rots are controlled by cooling storage piles. This method of control, however, requires favorable weather conditions for stora...

  9. Jasmonic acid and salicylic acid inhibit growth of three sugarbeet storage rot pathogens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Storage rots contribute to postharvest losses by consuming sucrose and increasing carbohydrate impurities that increase sugar loss to molasses during processing. They also increase root respiration rate, which causes additional sucrose loss and contributes to pile warming. Currently, storage rots ...

  10. Effects of bagasse-charcoal addition to soil on nitrate leaching in calcaric soils

    NASA Astrophysics Data System (ADS)

    Kameyama, K.; Miyamoto, T.; Shinogi, Y.

    2009-12-01

    Nitrate leaching in soils is often an important aspect in agriculture. Nitrate is leached from the root zone, where plants can utilize them, by surplus rainfall because little nitrate is absorbed by soil colloids. Miyako Island (target area) is located in the subtropical zone and comprised of coral limestone with high permeability. Land surface is covered with calcaric dark red soil that is called “Shimajiri-Maji”. Since the soil has low water- and fertilizer-retaining capacity, fertilizer-derived nitrogen easily leaches from the root zone during surplus rainfall and the nitrogen utilization efficiency of crops is relatively low. Biochars, charcoal produced from pyrolysis of biomass, are known to adsorb dissolved nitrate. Sugarcane bagasse is the main biomass resource on the island because agriculture is the main industry on the island and sugarcane is cultivated in approximately 70% of the farmland. However, the adsorption characteristics of bagasse-charcoals for nitrate have not yet been clarified. The objective of this study was to evaluate the dependency of carbonization temperatures on the nitrate adsorption properties of bagasse-charcoals and the effects of bagasse-charcoal addition to the soil on NO3-N transport in the soil for optimal use of bagasse-charcoal as a soil amendment in Miyako Island. Sugarcane bagasse were air-dried and heated in a batch-type carbonization furnace at five different carbonization temperatures (400, 500, 600, 700 and 800°C) with a holding time of 2 h. Nitrate adsorption by soil and bagasse-charcoals at each carbonization temperature was measured by the batch equilibrium technique. NO3-N transport behavior in charcoal-amended soils (rates of charcoal addition: 0, 5 and 10 wt %) was evaluated in the column experiments. The breakthrough curves of NO3-N concentrations in the effluents from the bottom of the columns were analyzed with a convective-dispersion model. The model described one-dimensional transport of a sorbing solute

  11. Regional Changes in Charcoal-Burning Suicide Rates in East/Southeast Asia from 1995 to 2011: A Time Trend Analysis

    PubMed Central

    Chang, Shu-Sen; Chen, Ying-Yeh; Yip, Paul S. F.; Lee, Won Jin; Hagihara, Akihito; Gunnell, David

    2014-01-01

    rate did not differ by sex/age group in Taiwan and Hong Kong but appeared to be greatest in people aged 15–24 y in Japan and people aged 25–64 y in the Republic of Korea. The lack of specific codes for charcoal-burning suicide in the International Classification of Diseases and variations in coding practice in different countries are potential limitations of this study. Conclusions Charcoal-burning suicides increased markedly in some East/Southeast Asian countries (Hong Kong, Taiwan, Japan, the Republic of Korea, and Singapore) in the first decade of the 21st century, but such rises were not experienced by all countries in the region. In countries with a rise in charcoal-burning suicide rates, the timing, scale, and sex/age pattern of increases varied by country. Factors underlying these variations require further investigation, but may include differences in culture or in media portrayals of the method. Please see later in the article for the Editors' Summary PMID:24691071

  12. Reaction of Cauliflower Genotypes to Black Rot of Crucifers

    PubMed Central

    da Silva, Lincon Rafael; da Silva, Renan César Dias; Cardoso, Atalita Francis; de Mello Pelá, Gláucia; Carvalho, Daniel Diego Costa

    2015-01-01

    This study aimed to evaluate six cauliflower genotypes regarding their resistance to black rot and their production performance. To do so, it was conducted two field experiments in Ipameri, Goiás, Brazil, in 2012 and 2013. It was used a randomized block design, with four replications (total of 24 plots). Each plot consisted of three planting lines 2.5 m long (six plants/line), spaced 1.0 m apart, for a total area of 7.5 m2. Evaluations of black rot severity were performed at 45 days after transplanting, this is, 75 days after sowing (DAS), and yield evaluations at 90 to 105 DAS. The Verona 184 genotype was the most resistant to black rot, showing 1.87 and 2.25% of leaf area covered by black rot symptom (LACBRS) in 2012 and 2013. However, it was not among the most productive materials. The yield of the genotypes varied between 15.14 and 25.83 t/ha in both years, Lisvera F1 (21.78 and 24.60 t/ha) and Cindy (19.95 and 23.56 t/ha) being the most productive. However, Lisvera F1 showed 6.37 and 9.37% of LACBRS and Cindy showed 14.25 and 14.87% of LACBRS in 2012 and 2013, being both considered as tolerant to black rot. PMID:26060437

  13. Species Identification and Variation in the North American Cranberry Fruit Rot Complex

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Many different species of pathogenic fungi cause cranberry fruit rot. The contribution of any given species can be quite variable depending on a host of cultural and environmental factors. Control of fruit rot can be problematic in the Northeast and in other growing regions losses due to fruit rot ...

  14. Combustion efficiency and hydrocarbon emissions from charcoal production kilns in the tropics

    SciTech Connect

    Ward, D.E.; Hao, W.M.; Babbitt, R.E.

    1995-12-01

    Charcoal is one of the major energy resources in tropical countries. We investigate the combustion processes in charcoal production kilns in Zambia and Brazil. The Zambian kilns were made of earth and there was sufficient air for combustion inside the kilns. The Brazilian kilns were made of bricks which limited the available oxygen. The combustion efficiency and the concentrations of CO{sub 2}, CO, CH{sub 4}, C{sub 2}-C{sub 6} alkanes and alkenes, and aromatic compounds produced were monitored throughout the combustion processes. The contributions of charcoal production processes to the atmospheric sources of these gases were estimated. The strategies for improving charcoal yield and reducing emissions of carbon-containing compounds are discussed.

  15. Efficacy of charcoal cathartic versus ipecac in reducing serum acetaminophen in a simulated overdose.

    PubMed

    McNamara, R M; Aaron, C K; Gemborys, M; Davidheiser, S

    1989-09-01

    The traditional role of gastric emptying as the initial step in the management of the poisoned patient has recently been questioned; immediate activated charcoal administration has been recommended by some. In the setting of acetaminophen overdose, ipecac-induced emesis may interfere with subsequent oral antidotal therapy. Therefore, we conducted a study to compare the efficacy of initial therapy with ipecac with therapy with activated charcoal-cathartic in a simulated acetaminophen overdosage. Ten healthy volunteers participated in a randomized, crossover trial. Subjects ingested 3.0 g acetaminophen, followed by either no intervention, 30 mL syrup of ipecac, or 50 g activated charcoal-sorbitol solution at one hour. Serial acetaminophen levels were determined at intervals over eight hours. Both interventions significantly reduced the area under the curve compared with control (P less than .05). When comparing ipecac with activated charcoal-cathartic, no significant difference was noted among these groups. PMID:2569851

  16. Activated charcoal-carboxymethylcellulose gel formulation as an antidotal agent for orally ingested aspirin.

    PubMed

    Mathur, L K; Jaffe, J M; Colaizzi, J L; Moriarty, R W

    1976-07-01

    The in vivo effect on aspirin absorption of a potentially more palatable form of activated charcoal was compared to that of a simple aqueous slurry of activated charcoal. The experimental formulation consisted of 20.0 g of activated charcoal, 2.25 g of carboxymethylcellulose (CMC) and 42.8 ml of water; it was tested with and without chocolate syrup as a flavoring agent added just prior to administration. Six subjects were treated in crossover fashion following an aspirin dose of 972 mg. Total urinary excretion of salicylate was measured over 48 hours. Although all three treatments appeared to be effective in reducing the rate and extent of aspirin absorption, the slurry was significantly more effective in reducing the total amount absorbed than the charcoal-CMC gel with chocolate syrup. The slight difference in effectiveness between the gel formulation with and without the chocolate syrup was not significant. PMID:941924

  17. Chemical structure of wood charcoal by infrared spectroscopy and multivariate analysis.

    PubMed

    Labbé, Nicole; Harper, David; Rials, Timothy; Elder, Thomas

    2006-05-17

    In this work, the effect of temperature on charcoal structure and chemical composition is investigated for four tree species. Wood charcoal carbonized at various temperatures is analyzed by mid infrared spectroscopy coupled with multivariate analysis and by thermogravimetric analysis to characterize the chemical composition during the carbonization process. The multivariate models of charcoal were able to distinguish between species and wood thermal treatments, revealing that the characteristics of the wood charcoal depend not only on the wood species, but also on the carbonization temperature. This work demonstrates the potential of mid infrared spectroscopy in the whiskey industry, from the identification and classification of the wood species for the mellowing process to the chemical characterization of the barrels after the toasting and charring process. PMID:19127715

  18. Measurement and calculation of the sound absorption coefficient of pine wood charcoal

    NASA Astrophysics Data System (ADS)

    Suh, Jae Gap; Baik, Kyung min; Kim, Yong Tae; Jung, Sung Soo

    2013-10-01

    Although charcoal has been widely utilized for physical therapy and as a deodorant, water purifier, etc. due to its porous features, research on its role as a sound-absorbing material is rarely found. Thus, the sound absorption coefficients of pine wood charcoal were measured using an impedance tube and were compared with the theoretical predictions in the frequency range of 500˜ 5000 Hz. The theory developed in the current study only considers the lowest possible mode propagating along the air channels of the charcoal and shows good agreements with the measurements. As the frequency is increased, the sound absorption coefficients of pine wood charcoals also increase, but are lower than those of other commonly-used sound-absorbing materials.

  19. The use of white-rot fungi as active biofilters

    SciTech Connect

    Braun-Luellemann, A.; Johannes, C.; Majcherczyk, A.; Huettermann, A.

    1995-12-31

    White-rot fungi, growing on lignocellulosic substrates, have been successfully used as active organisms in biofilters. Filters using these fungi have a very high biological active surface area, allowing for high degrees of retention, a comparatively low pressure drop, and a high physical stability. The unspecific action of the extracellular enzymes of the white-rot fungi allows for the degradation of a wide variety of substances by the same organism. Degradation of several compounds in the gas phase by the white-rot fungi Trametes versicolor, Pleurotus ostreatus, Bjerkandera adusta, and Phanerochaete chrysosporium was tested. Among the aromatic solvents, styrene was the compound that was most readily degraded, followed by ethylbenzene, xylenes, and toluene. Tetrahydrofuran and dichloromethane were also degraded, whereas dioxane could not be attacked by fungi under the conditions used. Acrylonitrile and aniline were degraded very well, whereas pyridine was resistant to degradation. The process for removing styrene is now in the scaling-up stage.

  20. Fabry-Pérot interferometry for long range displacement sensing.

    PubMed

    Thurner, Klaus; Braun, Pierre-François; Karrai, Khaled

    2013-09-01

    We investigate different optical configurations of a low-finesse Fabry-Pérot interferometer used for displacement sensing. The different configurations of the Fabry-Pérot cavity are selected in order to achieve large measurement ranges and angular alignment tolerances and to make the interferometer applicable for targets of various reflectivity ranges. The possible working ranges and angular alignment tolerances are characterized with respect to the interference contrast which is a measure for the signal quality. The use of a confocal arrangement enables a measurement range of up to about 0.4 m, or to work with an angular tolerance of more than ±0.2°. In order to predict the optical response of arbitrary configurations of the Fabry-Pérot interferometer, we introduce a simulation method based on the Airy formula and the fiber optic coupling efficiency.

  1. Cacao diseases: A history of old enemies and new encounters

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This book reviews the current knowledge of cacao pathogens and their management methods. Topics discussed include the history, biology, and genetic diversity of Moniliophthora (causing witches’ broom and frosty pod rot) and Phytophthora species (causing black pod rot) that cause diseases resulting i...

  2. Inhibitory effect and enzymatic analysis of E-cinnamaldehyde against sclerotinia carrot rot.

    PubMed

    Ojaghian, Mohammad Reza; Wang, Qi; Li, Xiaolin; Sun, Xiaoting; Xie, Guan-Lin; Zhang, Jingze; Hai-Wei, Fan; Wang, Li

    2016-02-01

    This study was conducted to determine the inhibitory effect of E-cinnamaldehyde (EC) against causal agent of storage carrot rot, Sclerotinia sclerotiorum, under in vivo and in vitro conditions. Based on the results, EC was able to completely inhibit mycelial growth of three isolates (P>0.05) in both volatile and contact phases after 6days at the concentrations 200μl and 1μl/ml, respectively. In addition, EC at concentrations 1 and 10μl/ml completely inhibited carpogenic germination of three isolates. The results of in vivo trials showed that EC at the concentration of 10μl/ml was able to control the disease caused by isolates 1 and 3. However the disease caused by isolate 2 was inhibited with the concentration of 20μl/ml. In enzyme analyses, the activity of polyphenoloxidase and peroxidase did not change in the inoculated carrots after application of EC. Furthermore, the level of phenylalanine ammonia lyase decreased. These results indicated that EC does not have any potential to be considered as resistance inducers against sclerotinia carrot rot. PMID:26821652

  3. Screening bactericidal effect of Pectobacterium carotovorum subsp. carotovorum strains against causal agent of potato soft rot.

    PubMed

    Kazemi-Zaromi, Samaneh; Baghaee-Ravari, Sareh; Khodaygan, Pejman; Falahati-Rastegar, Mahrokh

    2016-02-01

    This study focuses on the potential of Pectobacterium carotovorum subsp. carotovorum (Pcc) strains producing bacteriocin as a tool to control potato soft rot disease. Thirty out of 48 purified bacterial strains were characterized as Pcc using specific PCR and phenotypic tests. The pathogenicity and pectate degrading assays were recorded positive for 13 strains. Bacteriocin typing clustered producers into three groups according to their antimicrobial spectra. Majority of the producers except strains of group II showed antibacterial activity toward relative genus and the role of UV or mitomycin C was inductive. In addition, none of the distant genus was sensitive to Pcc bacteriocins except Rhizobium vitis. Molecular detection of four bacteriocins including carotovoricin, carosin S1, S2 and carosin D was performed. Overall, 54.5% of group I, 47.3 and 70% of groups II and III strains carried carotovoricin and four strains harbored gene corresponding to carosin S1. According to our data divers antimicrobial patterns obtained by Pcc strains and existence of new bateriocines could be possible. Moreover, our findings recommended that direct application of P29 or expression of corresponding genes of Pog22 or P21 in a nonpathogenic strain as a biocontrol agent may improve soft rot disease control. PMID:26523939

  4. Antagonistic and Biocontrol Potential of Trichoderma asperellum ZJSX5003 Against the Maize Stalk Rot Pathogen Fusarium graminearum.

    PubMed

    Li, Yaqian; Sun, Ruiyan; Yu, Jia; Saravanakumar, Kandasamy; Chen, Jie

    2016-09-01

    The efficacy of seven strains of Trichoderma asperellum collected from the fields in Southern China was assessed against Fusarium graminearum (FG) the causal agent of corn stalk rot of maize were in vitro for their antagonistic properties followed by statistical model of principal compound analysis to identify the beneficial antagonist T. asperellum strain. The key factors of antagonist activity were attributed to a total of 13 factors including cell wall degrading enzymes (chitnase, protease and β-glucanases), secondary metabolites and peptaibols and these were analyzed from eight strains of Trichoderma. A linear regression model demonstrated that interaction of enzymes and secondary metabolites of T. asperellum strain ZJSX5003 enhanced the antagonist activity against FG. Further, this strain displayed a disease reduction of 71 % in maize plants inoculated with FG compared to negative control. Pointing out that the T. asperellum strain ZJSX5003 is a potential source for the development of a biocontrol agent against corn stalk rot. PMID:27407296

  5. Antagonistic and Biocontrol Potential of Trichoderma asperellum ZJSX5003 Against the Maize Stalk Rot Pathogen Fusarium graminearum.

    PubMed

    Li, Yaqian; Sun, Ruiyan; Yu, Jia; Saravanakumar, Kandasamy; Chen, Jie

    2016-09-01

    The efficacy of seven strains of Trichoderma asperellum collected from the fields in Southern China was assessed against Fusarium graminearum (FG) the causal agent of corn stalk rot of maize were in vitro for their antagonistic properties followed by statistical model of principal compound analysis to identify the beneficial antagonist T. asperellum strain. The key factors of antagonist activity were attributed to a total of 13 factors including cell wall degrading enzymes (chitnase, protease and β-glucanases), secondary metabolites and peptaibols and these were analyzed from eight strains of Trichoderma. A linear regression model demonstrated that interaction of enzymes and secondary metabolites of T. asperellum strain ZJSX5003 enhanced the antagonist activity against FG. Further, this strain displayed a disease reduction of 71 % in maize plants inoculated with FG compared to negative control. Pointing out that the T. asperellum strain ZJSX5003 is a potential source for the development of a biocontrol agent against corn stalk rot.

  6. Identification of putative candidate genes for red rot resistance in sugarcane (Saccharum species hybrid) using LD-based association mapping.

    PubMed

    Singh, Ram K; Banerjee, Nandita; Khan, M S; Yadav, Sonia; Kumar, Sanjeev; Duttamajumder, S K; Lal, Ram Ji; Patel, Jinesh D; Guo, H; Zhang, Dong; Paterson, Andrew H

    2016-06-01

    Red rot is a serious disease of sugarcane caused by the fungus Colletotrichum falcatum that has a colossal damage potential. The fungus, prevalent mainly in the Indian sub-continent, keeps on producing new pathogenic strains leading to breakdown of resistance in newly released varieties and hence the deployment of linked markers for marker-assisted selection for resistance to this disease can fine tune the breeding programme. This study based on a panel of 119 sugarcane genotypes fingerprinted for 944 SSR alleles was undertaken with an aim to identify marker-trait associations (MTAs) for resistance to red rot. Mixed linear model containing population structure and kinship as co-factor detected four MTAs that were able to explain 10-16 % of the trait variation, individually. Among the four MTAs, EST sequences diagnostic of three could be BLAST searched to the sorghum genome with significant sequence homology. Several genes encoding important plant defence related proteins, viz., cytochrome P450, Glycerol-3-phosphate transporter-1, MAP Kinase-4, Serine/threonine-protein kinase, Ring finger domain protein and others were localized to the vicinity of these MTAs. These positional candidate genes are worth of further investigation and possibly these could contribute directly to red rot resistance, and may find a potential application in marker-assisted sugarcane breeding.

  7. Identification of putative candidate genes for red rot resistance in sugarcane (Saccharum species hybrid) using LD-based association mapping.

    PubMed

    Singh, Ram K; Banerjee, Nandita; Khan, M S; Yadav, Sonia; Kumar, Sanjeev; Duttamajumder, S K; Lal, Ram Ji; Patel, Jinesh D; Guo, H; Zhang, Dong; Paterson, Andrew H

    2016-06-01

    Red rot is a serious disease of sugarcane caused by the fungus Colletotrichum falcatum that has a colossal damage potential. The fungus, prevalent mainly in the Indian sub-continent, keeps on producing new pathogenic strains leading to breakdown of resistance in newly released varieties and hence the deployment of linked markers for marker-assisted selection for resistance to this disease can fine tune the breeding programme. This study based on a panel of 119 sugarcane genotypes fingerprinted for 944 SSR alleles was undertaken with an aim to identify marker-trait associations (MTAs) for resistance to red rot. Mixed linear model containing population structure and kinship as co-factor detected four MTAs that were able to explain 10-16 % of the trait variation, individually. Among the four MTAs, EST sequences diagnostic of three could be BLAST searched to the sorghum genome with significant sequence homology. Several genes encoding important plant defence related proteins, viz., cytochrome P450, Glycerol-3-phosphate transporter-1, MAP Kinase-4, Serine/threonine-protein kinase, Ring finger domain protein and others were localized to the vicinity of these MTAs. These positional candidate genes are worth of further investigation and possibly these could contribute directly to red rot resistance, and may find a potential application in marker-assisted sugarcane breeding. PMID:26961118

  8. Soil charcoal to assess the impacts of past human disturbances on tropical forests.

    PubMed

    Vleminckx, Jason; Morin-Rivat, Julie; Biwolé, Achille B; Daïnou, Kasso; Gillet, Jean-François; Doucet, Jean-Louis; Drouet, Thomas; Hardy, Olivier J

    2014-01-01

    The canopy of many central African forests is dominated by light-demanding tree species that do not regenerate well under themselves. The prevalence of these species might result from ancient slash-and-burn agricultural activities that created large openings, while a decline of these activities since the colonial period could explain their deficit of regeneration. To verify this hypothesis, we compared soil charcoal abundance, used as a proxy for past slash-and-burn agriculture, and tree species composition assessed on 208 rainforest 0.2 ha plots located in three areas from Southern Cameroon. Species were classified in regeneration guilds (pioneer, non-pioneer light-demanding, shade-bearer) and characterized by their wood-specific gravity, assumed to reflect light requirement. We tested the correlation between soil charcoal abundance and: (i) the relative abundance of each guild, (ii) each species and family abundance and (iii) mean wood-specific gravity. Charcoal was found in 83% of the plots, indicating frequent past forest fires. Radiocarbon dating revealed two periods of fires: "recent" charcoal were on average 300 years old (up to 860 BP, n = 16) and occurred in the uppermost 20 cm soil layer, while "ancient" charcoal were on average 1900 years old (range: 1500 to 2800 BP, n = 43, excluding one sample dated 9400 BP), and found in all soil layers. While we expected a positive correlation between the relative abundance of light-demanding species and charcoal abundance in the upper soil layer, overall there was no evidence that the current heterogeneity in tree species composition can be explained by charcoal abundance in any soil layer. The absence of signal supporting our hypothesis might result from (i) a relatively uniform impact of past slash-and-burn activities, (ii) pedoturbation processes bringing ancient charcoal to the upper soil layer, blurring the signal of centuries-old Human disturbances, or (iii) the prevalence of other environmental

  9. Adsorption of dimethyl sulfide from aqueous solution by a cost-effective bamboo charcoal.

    PubMed

    Wang, Ming; Huang, Zheng-Hong; Liu, Guangjia; Kang, Feiyu

    2011-06-15

    The adsorption of dimethyl sulfide from an aqueous solution by a cost-effective bamboo charcoal from Dendrocalamus was studied in comparison with other carbon adsorbents. The bamboo charcoal exhibited superior adsorption on dimethyl sulfide compared with powdered activated carbons at different adsorbent dosages. The adsorption characteristics of dimethyl sulfide onto bamboo charcoal were investigated under varying experimental conditions such as particle size, contact time, initial concentration and adsorbent dosage. The dimethyl sulfide removal was enhanced from 31 to 63% as the particle size was decreased from 24-40 to >300 mesh for the bamboo charcoal. The removal efficiency increased with increasing the adsorbent dosage from 0.5 to 10mg, and reached 70% removal efficiency at 10mg adsorbed. The adsorption capacity (μg/g) increased with increasing concentration of dimethyl sulfide while the removal efficiency decreased. The adsorption process conforms well to a pseudo-second-order kinetics model. The adsorption of dimethyl sulfide is more appropriately described by the Freundlich isotherm (R(2), 0.9926) than by the Langmuir isotherm (R(2), 0.8685). Bamboo charcoal was characterized by various analytical methods to understand the adsorption mechanism. Bamboo charcoal is abundant in acidic and alcohol functional groups normally not observed in PAC. A distinct difference is that the superior mineral composition of Fe (0.4 wt%) and Mn (0.6 wt%) was detected in bamboo charcoal-elements not found in PAC. Acidic functional group and specific adsorption sites would be responsible for the strong adsorption of dimethyl sulfide onto bamboo charcoal of Dendrocalamus origin.

  10. Salts of the iodine oxyacids in the impregnation of adsorbent charcoal for trapping radioactive methyliodide

    DOEpatents

    Deitz, Victor R.; Blachly, Charles H.

    1977-04-05

    Radioactive iodine and radioactive methyliodide can be more than 99.7 per cent removed from the air stream of a nuclear reactor by passing the air stream through a 2-inch thick filter which is made up of impregnated charcoal prepared by contacting the charcoal with a solution containing KOH, iodine or an iodide, and an oxyacid, followed by contacting with a solution containing a tertiary amine.

  11. Adsorption of dimethyl sulfide from aqueous solution by a cost-effective bamboo charcoal.

    PubMed

    Wang, Ming; Huang, Zheng-Hong; Liu, Guangjia; Kang, Feiyu

    2011-06-15

    The adsorption of dimethyl sulfide from an aqueous solution by a cost-effective bamboo charcoal from Dendrocalamus was studied in comparison with other carbon adsorbents. The bamboo charcoal exhibited superior adsorption on dimethyl sulfide compared with powdered activated carbons at different adsorbent dosages. The adsorption characteristics of dimethyl sulfide onto bamboo charcoal were investigated under varying experimental conditions such as particle size, contact time, initial concentration and adsorbent dosage. The dimethyl sulfide removal was enhanced from 31 to 63% as the particle size was decreased from 24-40 to >300 mesh for the bamboo charcoal. The removal efficiency increased with increasing the adsorbent dosage from 0.5 to 10mg, and reached 70% removal efficiency at 10mg adsorbed. The adsorption capacity (μg/g) increased with increasing concentration of dimethyl sulfide while the removal efficiency decreased. The adsorption process conforms well to a pseudo-second-order kinetics model. The adsorption of dimethyl sulfide is more appropriately described by the Freundlich isotherm (R(2), 0.9926) than by the Langmuir isotherm (R(2), 0.8685). Bamboo charcoal was characterized by various analytical methods to understand the adsorption mechanism. Bamboo charcoal is abundant in acidic and alcohol functional groups normally not observed in PAC. A distinct difference is that the superior mineral composition of Fe (0.4 wt%) and Mn (0.6 wt%) was detected in bamboo charcoal-elements not found in PAC. Acidic functional group and specific adsorption sites would be responsible for the strong adsorption of dimethyl sulfide onto bamboo charcoal of Dendrocalamus origin. PMID:21549503

  12. Emissions of greenhouse gases and other airborne pollutants from charcoal making in Kenya and Brazil

    NASA Astrophysics Data System (ADS)

    Pennise, David M.; Smith, Kirk R.; Kithinji, Jacob P.; Rezende, Maria Emilia; Raad, Tulio Jardim; Zhang, Junfeng; Fan, Chengwei

    2001-10-01

    Airborne emissions from charcoal-making kilns commonly used in Kenya and Brazil were measured during typical operating conditions. Emission factors were determined for carbon dioxide (CO2), methane (CH4), nitrous oxide (N2O), carbon monoxide (CO), total nonmethane hydrocarbons, nitrogen oxides (NOx) and total suspended particulates (TSP) along with charcoal production efficiency and charcoal and fuelwood carbon and energy contents. The conversion of wood carbon to charcoal carbon ranged from 37 to 69%, depending on kiln type. Emission factors, expressed as grams of pollutant per kilogram of charcoal produced, for the eight kilns ranged from 543 to 3027 for CO2, 32-62 for CH4, 143-373 for CO, 24-124 for total nonmethane organic compounds, 0.011-0.30 for N2O, 0.0054-0.13 for NOx, and 13-41 for TSP. On average, fuelwood carbon was approximately diverted as follows: 51% to charcoal, 27% to CO2, and 13% to products of incomplete combustion (PIC). Due to the higher global warming potentials (GWPs) of PIC relative to CO2 on a carbon atom basis, such kilns can produce rather large net greenhouse gas emissions, even when the wood is harvested renewably. Based on published GWPs for CO2, CH4, and N2O only, we estimate that 0.77-1.63 kg C-CO2 (carbon as carbon dioxide equivalents) is emitted per kilogram of charcoal produced. We estimate that the total primary global warming commitment (GWC) of Kenyan and Brazilian charcoal-making kiln emissions is about 2.7 and 7.5 million tons (Mt) C-CO2, respectively. For comparison, the primary GWC from fossil fuel use in the United States is almost 1700 Mt C-CO2.

  13. Soil charcoal to assess the impacts of past human disturbances on tropical forests.

    PubMed

    Vleminckx, Jason; Morin-Rivat, Julie; Biwolé, Achille B; Daïnou, Kasso; Gillet, Jean-François; Doucet, Jean-Louis; Drouet, Thomas; Hardy, Olivier J

    2014-01-01

    The canopy of many central African forests is dominated by light-demanding tree species that do not regenerate well under themselves. The prevalence of these species might result from ancient slash-and-burn agricultural activities that created large openings, while a decline of these activities since the colonial period could explain their deficit of regeneration. To verify this hypothesis, we compared soil charcoal abundance, used as a proxy for past slash-and-burn agriculture, and tree species composition assessed on 208 rainforest 0.2 ha plots located in three areas from Southern Cameroon. Species were classified in regeneration guilds (pioneer, non-pioneer light-demanding, shade-bearer) and characterized by their wood-specific gravity, assumed to reflect light requirement. We tested the correlation between soil charcoal abundance and: (i) the relative abundance of each guild, (ii) each species and family abundance and (iii) mean wood-specific gravity. Charcoal was found in 83% of the plots, indicating frequent past forest fires. Radiocarbon dating revealed two periods of fires: "recent" charcoal were on average 300 years old (up to 860 BP, n = 16) and occurred in the uppermost 20 cm soil layer, while "ancient" charcoal were on average 1900 years old (range: 1500 to 2800 BP, n = 43, excluding one sample dated 9400 BP), and found in all soil layers. While we expected a positive correlation between the relative abundance of light-demanding species and charcoal abundance in the upper soil layer, overall there was no evidence that the current heterogeneity in tree species composition can be explained by charcoal abundance in any soil layer. The absence of signal supporting our hypothesis might result from (i) a relatively uniform impact of past slash-and-burn activities, (ii) pedoturbation processes bringing ancient charcoal to the upper soil layer, blurring the signal of centuries-old Human disturbances, or (iii) the prevalence of other environmental

  14. Should we do early and frequent charcoal hemoperfusion in phenytoin toxicity?

    PubMed Central

    Sahoo, Jyoti Narayan; Gurjar, Mohan

    2016-01-01

    Phenytoin toxicity or adverse drug reaction is common due to its narrow therapeutic window. Mild and moderate toxicity require supportive care and enteral activated charcoal. In severe toxicity, charcoal hemoperfusion (CHP) have been shown to decrease serum phenytoin half-life and early recovery. Here, we report two cases with phenytoin toxicity who showed marked clinical improvement after early and frequent CHP treatment. PMID:27076716

  15. Pathogenicity of and plant immunity to soft rot pectobacteria

    PubMed Central

    Davidsson, Pär R.; Kariola, Tarja; Niemi, Outi; Palva, E. T.

    2013-01-01

    Soft rot pectobacteria are broad host range enterobacterial pathogens that cause disease on a variety of plant species including the major crop potato. Pectobacteria are aggressive necrotrophs that harbor a large arsenal of plant cell wall-degrading enzymes as their primary virulence determinants. These enzymes together with additional virulence factors are employed to macerate the host tissue and promote host cell death to provide nutrients for the pathogens. In contrast to (hemi)biotrophs such as Pseudomonas, type III secretion systems (T3SS) and T3 effectors do not appear central to pathogenesis of pectobacteria. Indeed, recent genomic analysis of several Pectobacterium species including the emerging pathogen Pectobacterium wasabiae has shown that many strains lack the entire T3SS as well as the T3 effectors. Instead, this analysis has indicated the presence of novel virulence determinants. Resistance to broad host range pectobacteria is complex and does not appear to involve single resistance genes. Instead, activation of plant innate immunity systems including both SA (salicylic acid) and JA (jasmonic acid)/ET (ethylene)-mediated defenses appears to play a central role in attenuation of Pectobacterium virulence. These defenses are triggered by detection of pathogen-associated molecular patterns (PAMPs) or recognition of modified-self such as damage-associated molecular patterns (DAMPs) and result in enhancement of basal immunity (PAMP/DAMP-triggered immunity or pattern-triggered immunity, PTI). In particular plant cell wall fragments released by the action of the degradative enzymes secreted by pectobacteria are major players in enhanced immunity toward these pathogens. Most notably bacterial pectin-degrading enzymes release oligogalacturonide (OG) fragments recognized as DAMPs activating innate immune responses. Recent progress in understanding OG recognition and signaling allows novel genetic screens for OG-insensitive mutants and will provide new insights

  16. Experience with improved charcoal and wood stoves for households and institutions in Kenya

    SciTech Connect

    Hyman, E.L.

    1985-01-01

    Efforts at promoting more fuel-efficient charcoal stoves to replace traditional charcoal stoves in Kenya offer some lessons for the dissemination of appropriate technologies. This paper looks at the market-based approach which has made the Kenyan charcoal stoves project a success. Trends in woodfuels (wood and charcoal) consumption in Kenya are identified; the traditional technology for charcoal combustion and the upgraded traditional technologies are described; production achievement and the dissemination and promotion strategy used are examined; and a financial and economic analysis is performed with social, health and environmental effects assessed. Other ways to achieve a more favourable balance between woodfuels consumption and supply are then discussed looking at more efficient charcoal kilns and household woodstoves, improved institutional stoves and increased wood production. The replication potential of the Kenya experiment in other countries is also explored. The lessons learnt from the the Kenya experience concern the relationship between technology, choice and delivery systems as they interact with, economic, institutional, and policy factors. In this case, the design work accepted the traditional technology as a starting point which helped ensure widespread acceptance by households. The potential desirability of relying on local artisans to manufacture consumer durables using existing private sector channels to market these goods is also shown. It also highlights the importance of going beyond a laissez-faire approach and supporting training, demonstration, and publicity to faciliate the workings of the private sector. In the Kenyan case, technology choice was relatively unsubsidized and left ot the preferences of consumers.

  17. Estimation of emissions from charcoal lighter fluid and review of alternatives. Final report

    SciTech Connect

    Campbell, D.L.; Stockton, M.B.

    1990-01-01

    The report gives results of an evaluation of emissions of volatile organic compounds (VOCs) from charcoal lighter fluid, a consumer product consisting entirely of volatile constituents. An estimated 46,250 tons (42,000 Mg) of charcoal lighter fluid is used in the U.S. each year. VOCs contribute to the formation of ozone; therefore, the ozone nonattainment issue has focused attention on VOCs emitted from many sources. VOCs are emitted when charcoal lighter fluid is used, but these emissions are difficult to quantify. Evaporative VOC losses occur from the lighter fluid prior to ignition, and combustion VOC losses occur from burning lighter-fluid-soaked charcoal briquettes. This study evaluates tests conducted to date on charcoal lighter fluid emissions. The information is most complete for evaporative VOC losses. The estimates vary greatly, however, based on the length of time between application of the lighter fluid and ignition. The limited tests conducted to date have not distinguished lighter fluid from charcoal-briquette combustion emissions.

  18. Chemical and Isotopic Thresholds in Charring: Implications for the Interpretation of Charcoal Mass and Isotopic Data.

    PubMed

    Pyle, Lacey A; Hockaday, William C; Boutton, Thomas; Zygourakis, Kyriacos; Kinney, Timothy J; Masiello, Caroline A

    2015-12-15

    Charcoal plays a significant role in the long-term carbon cycle, and its use as a soil amendment is promoted as a C sequestration strategy (biochar). One challenge in this research area is understanding the heterogeneity of charcoal properties. Although the maximum reaction temperature is often used as a gauge of pyrolysis conditions, pyrolysis duration also changes charcoal physicochemical qualities. Here, we introduce a formal definition of charring intensity (CI) to more accurately characterize pyrolysis, and we document variation in charcoal chemical properties with variation in CI. We find two types of responses to CI: either linear or threshold relationships. Mass yield decreases linearly with CI, while a threshold exists across which % C, % N, and δ(15)N exhibit large changes. This CI threshold co-occurs with an increase in charcoal aromaticity. C isotopes do not change from original biomass values, supporting the use of charcoal δ(13)C signatures to infer paleoecological conditions. Fractionation of N isotopes indicates that fire may be enriching soils in (15)N through pyrolytic N isotope fractionation. This influx of "black N" could have a significant impact on soil N isotopes, which we show theoretically using a simple mass-balance model.

  19. Chemical and Isotopic Thresholds in Charring: Implications for the Interpretation of Charcoal Mass and Isotopic Data.

    PubMed

    Pyle, Lacey A; Hockaday, William C; Boutton, Thomas; Zygourakis, Kyriacos; Kinney, Timothy J; Masiello, Caroline A

    2015-12-15

    Charcoal plays a significant role in the long-term carbon cycle, and its use as a soil amendment is promoted as a C sequestration strategy (biochar). One challenge in this research area is understanding the heterogeneity of charcoal properties. Although the maximum reaction temperature is often used as a gauge of pyrolysis conditions, pyrolysis duration also changes charcoal physicochemical qualities. Here, we introduce a formal definition of charring intensity (CI) to more accurately characterize pyrolysis, and we document variation in charcoal chemical properties with variation in CI. We find two types of responses to CI: either linear or threshold relationships. Mass yield decreases linearly with CI, while a threshold exists across which % C, % N, and δ(15)N exhibit large changes. This CI threshold co-occurs with an increase in charcoal aromaticity. C isotopes do not change from original biomass values, supporting the use of charcoal δ(13)C signatures to infer paleoecological conditions. Fractionation of N isotopes indicates that fire may be enriching soils in (15)N through pyrolytic N isotope fractionation. This influx of "black N" could have a significant impact on soil N isotopes, which we show theoretically using a simple mass-balance model. PMID:26523420

  20. Applied Technology of Bamboo Charcoal to Improvement and Purification of Air Quality

    NASA Astrophysics Data System (ADS)

    Takimoto, Akira; Tada, Yukio; Onishi, Hajime; Fukazawa, Tomohiro

    The use of bamboo charcoal, which is one of the carbon from wood, attracts attention from the viewpoint of the environmental protection. Bamboo charcoal has high adsorption removal ability to various substances. In addition Bamboo charcoal is effective also for the filtration of the suspended solid and the bacterium by the macro pore that originates in the plant frame structure. In present paper, a new concept of gas clean technology by bamboo charcoal and TiO2 with UV light irradiation was proposed. Its system is composed of TiO2-coated bamboo charcoal, TiO2-coated silica gel and UV lamp. Water vapor is adsorbed by bamboo charcoal and fine particles and airborne bacterium are trapped on the surface of it. Trapped contaminant is degraded by TiO2 and UV light. In addition, the degradation is promoted by •OH produced by adsorbed water vapor. The air purification sanitization possibility in high efficiency for this system was clarified.

  1. Post-Flight Sampling and Loading Characterization of Trace Contaminant Control Subassembly Charcoal

    NASA Technical Reports Server (NTRS)

    Perry, J. L.; Cole, H. E.; Cramblitt, E. L.; El-Lessy, H. N.; Manuel, S.; Tucker, C. D.

    2003-01-01

    Trace chemical contaminants produced by equipment offgassing and human metabolic processes are removed from the atmosphere of the International Space Station s U.S. Segment by a trace contaminant control subassembly (TCCS). The TCCS employs a combination of physical adsorption, thermal catalytic oxidation, and chemical adsorption processes to accomplish its task. A large bed of granular activated charcoal is a primary component of the TCCS. The charcoal contained in this bed, known as the charcoal bed assembly (CBA), is expendable and must be replaced periodically. Pre-flight engineering analyses based upon TCCS performance testing results established a service life estimate of 1 year. After nearly 1 year of cumulative in-flight operations, the first CBA was returned for refurbishment. Charcoal samples were collected and analyzed for loading to determine the best estimate for the CBAs service life. A history of in-flight TCCS operations is presented as well as a discussion of the charcoal sampling procedures and chemical analysis results. A projected service life derived from the observed charcoal loading is provided. Recommendations for better managing TCCS resources are presented.

  2. A contribution to the identification of charcoal origin in Brazil II - Macroscopic characterization of Cerrado species.

    PubMed

    Gonçalves, Thaís A P; Nisgoski, Silvana; Oliveira, Julia S; Marcati, Carmen R; Ballarin, Adriano W; Muñiz, Graciela I B

    2016-05-13

    The Brazilian Cerrado is the richest savanna in the world. It is also one of the biomes more threatened in the country and a hotspot for conservation priorities. The main causes of deforestation in Cerrado are agricultural practices, livestock and charcoal production. Although charcoal has a minor impact, its consumption represents the deforestation of 16.000 Km² of the Cerrado. To contribute for the biomes's conservation it is very important to improve forestry supervision. Thus, in this work we present the macroscopic characterization of charcoal from 25 Cerrado's species. We simulate the real conditions of forest controllers by using the magnifications of 10x, 25x and 65x. Likewise, the charcoals micrographs are all of transverse sections due to the larger amount of anatomical information. We also analyzed texture, brightness, vitrification, ruptures and some special features. The species present several differences in their anatomical structure. Although some of them are very unique, this work does not intent to identify charcoals only by macroscopic analyses. But it might give directions to future identification of genera or species. It also provides knowledge for government agents to verify the documents of forestry origin by fast analyzing a sample of charcoal itself. PMID:27192198

  3. The Salmonella Transcriptome in Lettuce and Cilantro Soft Rot Reveals a Niche Overlap with the Animal Host Intestine

    PubMed Central

    Goudeau, Danielle M.; Parker, Craig T.; Zhou, Yaguang; Sela, Shlomo; Kroupitski, Yulia

    2013-01-01

    Fresh vegetables have been recurrently associated with salmonellosis outbreaks, and Salmonella contamination of retail produce has been correlated positively with the presence of soft rot disease. We observed that population sizes of Salmonella enterica serovar Typhimurium SL1344 increased 56-fold when inoculated alone onto cilantro leaves, versus 2,884-fold when coinoculated with Dickeya dadantii, a prevalent pathogen that macerates plant tissue. A similar trend in S. enterica populations was observed for soft-rotted lettuce leaves. Transcriptome analysis of S. enterica cells that colonized D. dadantii-infected lettuce and cilantro leaves revealed a clear shift toward anaerobic metabolism and catabolism of substrates that are available due to the degradation of plant cells by the pectinolytic pathogen. Twenty-nine percent of the genes that were upregulated in cilantro macerates were also previously observed to have increased expression levels in the chicken intestine. Furthermore, multiple genes induced in soft rot lesions are also involved in the colonization of mouse, pig, and bovine models of host infection. Among those genes, the operons for ethanolamine and propanediol utilization as well as for the synthesis of cobalamin, a cofactor in these pathways, were the most highly upregulated genes in lettuce and cilantro lesions. In S. Typhimurium strain LT2, population sizes of mutants deficient in propanediol utilization or cobalamin synthesis were 10- and 3-fold lower, respectively, than those of the wild-type strain in macerated cilantro (P < 0.0002); in strain SL1344, such mutants behaved similarly to the parental strain. Anaerobic conditions and the utilization of nutrients in macerated plant tissue that are also present in the animal intestine indicate a niche overlap that may explain the high level of adaptation of S. enterica to soft rot lesions, a common postharvest plant disease. PMID:23104408

  4. Phanerozoic concentrations of atmospheric oxygen reconstructed from sedimentary charcoal

    NASA Astrophysics Data System (ADS)

    Glasspool, Ian J.; Scott, Andrew C.

    2010-09-01

    Variations of the Earth's atmospheric oxygen concentration (pO2) are thought to be closely tied to the evolution of life, with strong feedbacks between uni- and multicellular life and oxygen. On the geologic timescale, pO2 is regulated by the burial of organic carbon and sulphur, as well as by weathering. Reconstructions of atmospheric O2 for the past 400million years have therefore been based on geochemical models of carbon and sulphur cycling. However, these reconstructions vary widely, particularly for the Mesozoic and early Cenozoic eras. Here we show that the abundance of charcoal in mire settings is controlled by pO2, and use this proxy to reconstruct the concentration of atmospheric oxygen for the past 400million years. We estimate that pO2 was continuously above 26% during the Carboniferous and Permian periods, and that it declined abruptly around the time of the Permian-Triassic mass extinction. During the Triassic and Jurassic periods, pO2 fluctuated cyclically, with amplitudes up to 10% and a frequency of 20-30million years. Atmospheric oxygen concentrations have declined steadily from the middle of the Cretaceous period to present-day values of about 21%. We conclude, however, that variation in pO2 was not the main driver of the loss of faunal diversity during the Permo-Triassic and Triassic-Jurassic mass extinction events.

  5. Screening strawberry plants for anthracnose disease resistance using traditional and molecular techniques

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Anthracnose is one of the most destructive diseases of strawberry which may cause fruit rot, leaf and petiole lesions, crown rot, wilt, and death. Crop loss due to anthracnose diseases can reach into the millions of dollars. Three species of Colletotrichum are considered causative agents of anthr...

  6. Soybean fungal soil-borne diseases: a parameter for measuring the effect of agricultural intensification on soil health.

    PubMed

    Pérez-Brandán, C; Huidobro, J; Grümberg, B; Scandiani, M M; Luque, A G; Meriles, J M; Vargas-Gil, S

    2014-02-01

    The aim of this study was to investigate the influence of agricultural intensification on soil microbial diversity, chemical and physical parameters, and the decrease of the incidence of sudden death syndrome (Fusarium crassistipitatum) and charcoal rot (Macrophomina phaseolina) in soybean. Soils under different management systems were evaluated during 2 crop cycles: soybean monoculture for 24 and 11 years, soybean-maize rotation for 15 and 4 years, 1 year of soybean, and native vegetation. The incidence of both soil-borne diseases was higher under monoculture than under rotation. Increased populations of potential biocontrol agents (Trichoderma spp., Gliocladium spp., fluorescent pseudomonads) were associated with rotation treatments, especially in 2010-2011. The comparison of agricultural vs. native vegetation soil and the average of agricultural cycles showed that microbial biomass carbon and glomalin-related soil protein were higher in the rotation system than in monoculture (50% and 77%, respectively). Furthermore, from the community-level functional diversity (Biolog Eco plates), McIntosh index showed lower functional diversity in monoculture than in rotation and native vegetation plots. Agricultural intensification reduced microbial biomass carbon, glomalin-related soil protein, organic matter, total nitrogen, aggregate stability, and yield, and increased bulk density. Soil quality degradation was associated with the establishment of soil-borne pathogens and increased soybean plant susceptibility to disease.

  7. Soybean fungal soil-borne diseases: a parameter for measuring the effect of agricultural intensification on soil health.

    PubMed

    Pérez-Brandán, C; Huidobro, J; Grümberg, B; Scandiani, M M; Luque, A G; Meriles, J M; Vargas-Gil, S

    2014-02-01

    The aim of this study was to investigate the influence of agricultural intensification on soil microbial diversity, chemical and physical parameters, and the decrease of the incidence of sudden death syndrome (Fusarium crassistipitatum) and charcoal rot (Macrophomina phaseolina) in soybean. Soils under different management systems were evaluated during 2 crop cycles: soybean monoculture for 24 and 11 years, soybean-maize rotation for 15 and 4 years, 1 year of soybean, and native vegetation. The incidence of both soil-borne diseases was higher under monoculture than under rotation. Increased populations of potential biocontrol agents (Trichoderma spp., Gliocladium spp., fluorescent pseudomonads) were associated with rotation treatments, especially in 2010-2011. The comparison of agricultural vs. native vegetation soil and the average of agricultural cycles showed that microbial biomass carbon and glomalin-related soil protein were higher in the rotation system than in monoculture (50% and 77%, respectively). Furthermore, from the community-level functional diversity (Biolog Eco plates), McIntosh index showed lower functional diversity in monoculture than in rotation and native vegetation plots. Agricultural intensification reduced microbial biomass carbon, glomalin-related soil protein, organic matter, total nitrogen, aggregate stability, and yield, and increased bulk density. Soil quality degradation was associated with the establishment of soil-borne pathogens and increased soybean plant susceptibility to disease. PMID:24498984

  8. Chemical changes in soil charcoal of differing ages inferred from DRIFT spectra

    NASA Astrophysics Data System (ADS)

    Hobley, E. U.; Willgoose, G. R.; Frisia, S.; Jacobsen, G.

    2012-04-01

    Visible charcoal fragments were manually isolated from a sandy soil from the Southern Highlands of NSW, Australia, at depths of 0 - 30 cm and 30 - 60 cm. In the topsoil, the charcoal had a radiocarbon age of 85 ± 35 years BP, whereas the charcoal from the 30 - 60 cm layer was radiocarbon dated at 2540 ± 35 years BP. Diffuse reflectance FTIR (DRIFT) spectra of the charcoal reveal differences in both the number of peaks detected and their magnitudes. In the IR region 750 - 3800 cm-1, the charcoal from the lower depth had less peaks (140) than that of the topsoil (217). In the 1400 - 1600 cm-1 region, generally attributed to aromatics, the peaks were larger and more numerous (22 peaks) in the 0 - 30 cm sample than those of the 30 - 60 cm depth (14 peaks). The C-H stretch of alkenes and aromatics (3000 - 3100 cm-1) was similar at both depths, but the peak generally associated with the C-H stretch of alkanes (methyl and methylene groups) at 2850 - 3000 cm-1 was smaller in 30 - 60 cm depth than in the topsoil. In contrast to the reduction in aromatic and alkane signatures, oxidised forms were more pronounced in the older, deeper charcoal. Peaks associated with the free hydroxyl O-H stretch (alcohols and phenols) at 3640 - 3610 cm-1, carboxylic acids (910 - 950 cm-1), aliphatic O-H (alcohols) (1050 - 1150 cm-1) and cellulose-like structures (1020 cm-1), which contain a large number of uncondensed, oxidised rings, were larger in the charcoal from 30 - 60 cm than in that from the topsoil. Our results confirm that charcoal is highly persistent in soils, being retained for millennia. Aromatic structures are present in both younger and older charcoal, but decay leads to a reduction in the number and area of peaks detected at 1400 - 1600 cm-1, indicating less aromaticity. Alkane C-H also decreases with aging, probably attributable to its preferential degradation by soil microbes compared with condensed aromatic structures. Concurrent with diminished aromatic and alkane

  9. Factors Affecting the Estimation of Indoor Radon Using Passive Activated Charcoal Canisters

    NASA Astrophysics Data System (ADS)

    Scarpitta, Salvatore Charles

    1990-01-01

    Adsorption and desorption studies of 20 activated charcoals were conducted in a monolayer and a packed bed utilizing tracer gases. Kinetic studies, using xenon-133, demonstrate the existence of a two-compartment micropore volume with entrance capillaries which together determine the response characteristics of the charcoal to external concentration gradients of tracer gases. This new two -compartment model adequately describes the adsorption and desorption dynamics of radon in the presence of water vapor. Measurements with charcoal exposed to water vapor and Rn-222 in a monolayer and packed bed for exposure intervals of 1-7 days demonstrate that the uptake rate and total quantity of adsorbed Rn-222 are highly dependent upon the amount of water adsorbed. The effect of CO_2 on radon adsorption is small in any charcoal. The measured effective diffusion coefficient of radon in a packed bed of a peat based charcoal at 15% humidity and 25^circC is 7.97 times 10^{-6} cm^2/s. Condensed water vapor in the entrance capillaries reduces the effective pore radius, increasing the diffusion half-time, both into and out of the charcoal. The amount of adsorbed water per gram of charcoal required to block the entrance capillaries varies with the charcoal type. The proposed term for this quantity is the "break-point". A two-stage diffusion barrier charcoal monitor with a long diffusion path length was developed. This design inhibits passive airflow while maintaining the amount of adsorbed water vapor in the primary charcoal adsorbent below the break-point. Water removal at the entry port allows for longer exposure times improving the integrating capability necessary for indoor exposure assessment. The long diffusion path length increases the integration time -constant for radon adsorption normally 24 hours for conventional open-faced canisters to 50 hours for the improved canister. The increased integration time-constant allows for a 7 day sample to be measured at 70% humidity and 23

  10. Effect of Charcoal Volatile Matter Content and Feedstock on Soil Microbe-Carbon-Nitrogen Dynamics

    NASA Astrophysics Data System (ADS)

    McClellan, T.; Deenik, J. L.; Hockaday, W. C.; Campbell, S.; Antal, M. J., Jr.

    2010-12-01

    Charcoal has important biogeochemical implications in soil—first as a means to sequester carbon, and second as a soil conditioner to potentially enhance soil quality and fertility. Volatile matter (VM) content is a property of charcoal which describes its degree of thermal alteration, or carbonization. Results from greenhouse experiments have shown that plant growth can be negatively affected by charcoals with high VM content (20-35%), with and without fertilizer supplements, whereas low VM charcoal (6-9%) increased plant growth when combined with fertilizer. We conducted two laboratory studies to characterize the VM content of charcoals derived from two feedstocks (corncob and kiawe) and relate observed differences to key aspects of soil fertility. Using Fourier transform infrared spectroscopy (FTIR), 13C nuclear magnetic resonance (NMR), total phenol content (using a Prussian blue colorimetric assay), and gas chromatography-mass spectrometry (GC-MS), we found that the VM content of charcoal primarily consisted of alkanes, oxygen-substituted alkanes, and phenolic compounds. However, the GC-MS data indicated that charcoals can differ vastly in their extractable fraction, depending upon both VM content and feedstock. In a second set of experiments, we examined the effect of VM content and feedstock on soil microbial activity, available nitrogen (N), and soluble carbon (C). High VM corncob charcoals significantly enhanced microbial activity, coupled with net reduction in available N and soluble C. For a given feedstock, the extent of this effect was dependent upon VM content. However, the overall effect of VM content on microbial dynamics was apparently related to the composition of the acetone-extractable fraction, which was particularly important when comparing two charcoals derived from different feedstocks but with the equivalent VM contents. Removing the acetone-extractable fraction from the 23% VM corncob charcoal significantly reduced the enhancement of

  11. Population Structure of the North American Cranberry Fruit Rot Complex

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cranberry fruit rot is caused by a complex of pathogenic fungi. Variation in the populations within this complex from region to region could delay identification of the causal agents(s) and complicate management strategies. Our objective was to assess genetic variation within the four major fruit ro...

  12. Population structure of the North American cranberry fruit rot complex

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cranberry fruit rot (CFR) is caused by any one of thirty species of pathogenic fungi, with the contribution of any given species varying from bed to bed, year to year, and region to region. Because cranberry vines are shipped between growing regions for propagation, we hypothesized that a concurrent...

  13. Production and degradation of oxalic acid by brown rot fungi

    SciTech Connect

    Espejo, E.; Agosin, E. )

    1991-07-01

    Our results show that all of the brown rot fungi tested produce oxalic acid in liquid as well as in semisolid cultures. Gloeophyllum trabeum, which accumulates the lowest amount of oxalic acid during decay of pine holocellulose, showed the highest polysaccharide-depolymerizing activity. Semisolid cultures inoculated with this fungus rapidly converted {sup 14}C-labeled oxalic acid to CO{sub 2} during cellulose depolymerization. The other brown rot fungi also oxidized {sup 14}C-labeled oxalic acid, although less rapidly. In contrast, semisolid cultures inoculated with the white rot fungus Coriolus versicolor did not significantly catabolize the acid and did not depolymerize the holocellulose during decay. Semisolid cultures of G. trabeum amended with desferrioxamine, a specific iron-chelating agent, were unable to lower the degree of polymerization of cellulose or to oxidize {sup 14}C-labeled oxalic acid to the extent or at the rate that control cultures did. These results suggest that both iron and oxalic acid are involved in cellulose depolymerization by brown rot fungi.

  14. Production and Degradation of Oxalic Acid by Brown Rot Fungi

    PubMed Central

    Espejo, Eduardo; Agosin, Eduardo

    1991-01-01

    Our results show that all of the brown rot fungi tested produce oxalic acid in liquid as well as in semisolid cultures. Gloeophyllum trabeum, which accumulates the lowest amount of oxalic acid during decay of pine holocellulose, showed the highest polysaccharide-depolymerizing activity. Semisolid cultures inoculated with this fungus rapidly converted 14C-labeled oxalic acid to CO2 during cellulose depolymerization. The other brown rot fungi also oxidized 14C-labeled oxalic acid, although less rapidly. In contrast, semisolid cultures inoculated with the white rot fungus Coriolus versicolor did not significantly catabolize the acid and did not depolymerize the holocellulose during decay. Semisolid cultures of G. trabeum amended with desferrioxamine, a specific iron-chelating agent, were unable to lower the degree of polymerization of cellulose or to oxidize 14C-labeled oxalic acid to the extent or at the rate that control cultures did. These results suggest that both iron and oxalic acid are involved in cellulose depolymerization by brown rot fungi. PMID:16348522

  15. Factors contributing to bacterial bulb rots of onion

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The incidence of bacterial rots of onion bulbs is increasing and has become a serious problem for growers. This increase is likely due to a combination of factors, such as high bacterial populations in soils and irrigation water, heavy rains flooding production fields, higher temperatures, etc. It m...

  16. Susceptibility of highbush blueberry cultivars to Phytophthora root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phytophthora cinnamomi Rands is a ubiquitous soilborne pathogen associated with root rot in many woody perennial plant species, including highbush blueberry (Vaccinium sp.). To identify genotypes with resistance to the pathogen, cultivars and advanced selections of highbush blueberry were grown in a...

  17. OXIDATION OF PERSISTANT ENVIRONMENTAL POLLUTANTS BY A WHITE ROT FUNGUS

    EPA Science Inventory

    The white rot fungus Phanerochaete chrysosporium degraded DDT [1,1,-bis(4-chlorophenyl)-2,2,2-trichloroethane], 3,4,3',4'-tetrachlorobiphenyl, 2,4,5,2',-4',5'-hexachlorobiphenyl, 2,3,7,8-tetrachlorodibenzo-p-dioxin, lindane (1,2,3,4,5,6-hexachlorocylohexane), and benzo[a]pyrene t...

  18. Trichoderma rot on ‘Fallglo’ Tangerine Fruit

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In September 2009, Trichoderma rot symptoms were observed on ‘Fallglo’ fruit after 7 weeks of storage. Fourteen days prior to harvest, fruit were treated by dipping into one of four different fungicide solutions. Control fruit were dipped in tap water. After harvest, the fruit were degreening with 5...

  19. Trichoderma rot on ‘Fallglo’ Tangerine Fruit

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In September 2009, brown rot symptoms were observed on ‘Fallglo’ fruit after 7 weeks of storage. Fourteen days prior to harvest, fruit were treated by dipping into one of four different fungicide solutions. Control fruit were dipped in tap water. After harvest, the fruit were degreened with 5 ppm et...

  20. Co-Inoculation with Rhizobia and AMF Inhibited Soybean Red Crown Rot: From Field Study to Plant Defense-Related Gene Expression Analysis

    PubMed Central

    Gao, Xiang; Lu, Xing; Wu, Man; Zhang, Haiyan; Pan, Ruqian; Tian, Jiang; Li, Shuxian; Liao, Hong

    2012-01-01

    Background Soybean red crown rot is a major soil-borne disease all over the world, which severely affects soybean production. Efficient and sustainable methods are strongly desired to control the soil-borne diseases. Principal Findings We firstly investigated the disease incidence and index of soybean red crown rot under different phosphorus (P) additions in field and found that the natural inoculation of rhizobia and arbuscular mycorrhizal fungi (AMF) could affect soybean red crown rot, particularly without P addition. Further studies in sand culture experiments showed that inoculation with rhizobia or AMF significantly decreased severity and incidence of soybean red crown rot, especially for co-inoculation with rhizobia and AMF at low P. The root colony forming unit (CFU) decreased over 50% when inoculated by rhizobia and/or AMF at low P. However, P addition only enhanced CFU when inoculated with AMF. Furthermore, root exudates of soybean inoculated with rhizobia and/or AMF significantly inhibited pathogen growth and reproduction. Quantitative RT-PCR results indicated that the transcripts of the most tested pathogen defense-related (PR) genes in roots were significantly increased by rhizobium and/or AMF inoculation. Among them, PR2, PR3, PR4 and PR10 reached the highest level with co-inoculation of rhizobium and AMF. Conclusions Our results indicated that inoculation with rhizobia and AMF could directly inhibit pathogen growth and reproduction, and activate the plant overall defense system through increasing PR gene expressions. Combined with optimal P fertilization, inoculation with rhizobia and AMF could be considered as an efficient method to control soybean red crown rot in acid soils. PMID:22442737

  1. Utilization of unpeeled cassava (Manihot esculenta Crantz) root meal supplemented with or without charcoal by broiler chickens.

    PubMed

    Oso, A O; Akapo, O; Sanwo, K A; Bamgbose, A M

    2014-06-01

    A 42-day feeding trial was conducted using 480-day-old, male Marshall broilers to study the utilization of unpeeled cassava root meal (UCRM) supplemented with or without 6 g/kg charcoal. The experimental design was laid out in a 3 × 2 factorial arrangement of treatments having three inclusion levels of UCRM (0, 100 and 200 g/kg) with or without 6 g/kg charcoal supplementation. Each treatment consisted of 80 birds replicated eight times with 10 birds per replicate. Main effect of inclusion level of UCRM and supplementation of charcoal showed reduced (p < 0.05) final live weight, weight gain, feed intake and apparent crude protein digestibility of the birds with increasing inclusion levels of UCRM. Birds fed diets supplemented with charcoal showed higher (p < 0.05) final live weight, weight gain and feed intake than birds fed diets without charcoal. Supplementation of charcoal in diet containing 100 g/kg UCRM resulted in improved (p < 0.05) weight gain when compared with birds fed similar diet but not supplemented with charcoal. Broilers fed diet containing no UCRM but supplemented with charcoal had the highest overall (p < 0.05) final live weight and weight gain, while birds fed diet containing 200 g/kg UCRM supplemented with charcoal recorded the poorest (p < 0.05) final live weight and weight gain. Serum glutamate oxaloacetate transaminase (SGOT) and serum thiocyanate concentration increased (p < 0.05) with increasing dietary inclusion levels of UCRM. Dietary supplementation of charcoal resulted in increased (p < 0.05) concentration of serum glucose and cholesterol and reduced (p < 0.05) SGOT concentration. Birds fed diets containing UCRM had high (p < 0.05) serum thiocyanate concentration irrespective of dietary supplementation or not with 6 g/kg charcoal. In conclusion, supplementation of diet containing up to 100 g/kg UCRM with 6 g/kg charcoal showed improved weight gain without any deleterious effect on serum metabolites.

  2. The Effect and Action Mechanisms of Oligochitosan on Control of Stem Dry Rot of Zanthoxylum bungeanum

    PubMed Central

    Li, Peiqin; Cao, Zhimin; Wu, Zhou; Wang, Xing; Li, Xiuhong

    2016-01-01

    In this report, the effects of two oligochitosans, i.e., oligochitosan A (OCHA) and oligochitosan B (OCHB), on control of dry rot of Zanthoxylum bungeanum (Z. bungeanum) caused by Fusarium sambucinum (F. sambucinum) were evaluated. First, both oligochitosans show desirable ability to decrease the infection of F. sambucinum. Second, the oligochitosans strongly inhibit the radial colony and submerged biomass growth of F. sambucinum. Lastly, these oligochitosans are capable of increasing the activities of phenylalanine ammonia lyase (PAL), polyphenoloxidase (PPO) and peroxidase (POD) significantly, as well as enhancing the content of total phenolics in Z. bungeanum stems. These findings indicate that the protective effects of OCHA and OCHB on Z. bungeanum stems against dry rot may be associated with the direct fungitoxic function against pathogen and the elicitation of biochemical defensive responses in Z. bungeanum stems. The outcome of this report suggests that oligochitosans may serve as a promising natural fungicide to substitute, at least partially, for synthetic fungicides in the disease management of Z. bungeanum. PMID:27376270

  3. Efficacy of Chaetomium Species as Biological Control Agents against Phytophthora nicotianae Root Rot in Citrus

    PubMed Central

    Wattanachai, Pongnak; Kasem, Soytong; Poeaim, Supattra

    2015-01-01

    Thailand is one of the largest citrus producers in Southeast Asia. Pathogenic infection by Phytophthora, however, has become one of major impediments to production. This study identified a pathogenic oomycete isolated from rotted roots of pomelo (Citrus maxima) in Thailand as Phytophthora nicotianae by the internal transcribed spacer ribosomal DNA sequence analysis. Then, we examined the in vitro and in vivo effects of Chaetomium globosum, Chaetomium lucknowense, Chaetomium cupreum and their crude extracts as biological control agents in controlling this P. nicotianae strain. Represent as antagonists in biculture test, the tested Chaetomium species inhibited mycelial growth by 50~56% and parasitized the hyphae, resulting in degradation of P. nicotianae mycelia after 30 days. The crude extracts of these Chaetomium species exhibited antifungal activities against mycelial growth of P. nicotianae, with effective doses of 2.6~101.4 µg/mL. Under greenhouse conditions, application of spores and methanol extracts of these Chaetomium species to pomelo seedlings inoculated with P. nicotianae reduced root rot by 66~71% and increased plant weight by 72~85% compared to that in the control. The method of application of antagonistic spores to control the disease was simple and economical, and it may thus be applicable for large-scale, highly effective biological control of this pathogen. PMID:26539045

  4. Identification of Pathogenic Fusarium spp. Causing Maize Ear Rot and Potential Mycotoxin Production in China

    PubMed Central

    Duan, Canxing; Qin, Zihui; Yang, Zhihuan; Li, Weixi; Sun, Suli; Zhu, Zhendong; Wang, Xiaoming

    2016-01-01

    Ear rot is a serious disease that affects maize yield and grain quality worldwide. The mycotoxins are often hazardous to humans and livestock. In samples collected in China between 2009 and 2014, Fusarium verticillioides and F. graminearum species complex were the dominant fungi causing ear rot. According to the TEF-1α gene sequence, F. graminearum species complex in China included three independent species: F. graminearum, F. meridionale, and F. boothii. The key gene FUM1 responsible for the biosynthesis of fumonisin was detected in all 82 F. verticillioides isolates. Among these, 57 isolates mainly produced fumonisin B1, ranging from 2.52 to 18,416.44 µg/g for each gram of dry hyphal weight, in vitro. Three different toxigenic chemotypes were detected among 78 F. graminearum species complex: 15-ADON, NIV and 15-ADON+NIV. Sixty and 16 isolates represented the 15-ADON and NIV chemotypes, respectively; two isolates carried both 15-ADON and NIV-producing segments. All the isolates carrying NIV-specific segment were F. meridionale. The in vitro production of 15-ADON, 3-ADON, DON, and ZEN varied from 5.43 to 81,539.49; 6.04 to 19,590.61; 13.35 to 19,795.33; and 1.77 to 430.24 µg/g of dry hyphal weight, respectively. Altogether, our present data demonstrate potential main mycotoxin production of dominant pathogenic Fusarium in China. PMID:27338476

  5. Interactions Between Frankliniella fusca and Pantoea ananatis in the Center Rot Epidemic of Onion (Allium cepa).

    PubMed

    Dutta, Bhabesh; Gitaitis, Ronald; Barman, Apurba; Avci, Utku; Marasigan, Kathleen; Srinivasan, Rajagopalbabu

    2016-09-01

    An Enterobacteriaceae bacterium, Pantoea ananatis (Serrano) Mergaert, is the causal agent of an economically important disease of onion, center rot. P. ananatis is transmitted by an onion-infesting thrips, Frankliniella fusca (Hinds). However, interactions between F. fusca and P. ananatis as well as transmission mechanisms largely remain uncharacterized. This study investigated P. ananatis acquisition by thrips and transstadial persistence. Furthermore, the effects of bacterial acquisition on thrips fitness were also evaluated. When thrips larvae and adults were provided with acquisition access periods (AAP) on peanut leaflets contaminated with the bacterium, an exponentially positive relationship was observed between AAP and P. ananatis acquisition (R(2) ≥ 0.77, P = 0.01). P. ananatis persisted in thrips through several life stages (larvae, pupae, and adult). Despite the bacterial persistence, no significant effects on thrips fitness parameters such as fecundity and development were observed. Immunofluorescence microscopy of adult thrips with P. ananatis-specific antibody after 48 h AAP on contaminated food revealed that the bacterium was localized only in the gut. These results suggested that the pathogen is not circulative and could be transmitted through feces. Mechanical inoculation of onion seedlings with fecal rinsates produced center rot symptoms, whereas inoculation with rinsates potentially containing salivary secretions did not. These results provide evidence for stercorarian transmission (transmission through feces) of P. ananatis by F. fusca. PMID:27135678

  6. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.

    PubMed

    Quibod, Ian Lorenzo; Grande, Genelou; Oreiro, Eula Gems; Borja, Frances Nikki; Dossa, Gerbert Sylvestre; Mauleon, Ramil; Cruz, Casiana Vera; Oliva, Ricardo

    2015-01-01

    Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI) and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments. PMID:26422147

  7. A new report of pre-harvest ear rot of corn caused by Geotrichum candidum from Iran.

    PubMed

    Mirzaee, M R; Safarnejad, M R; Mohammadi, M

    2007-01-01

    In summer of 2004, samples of husk looseness ear of corn (Zea mays) (cv. 700-Karaj) were collected from corn fields in Ali-Abad (Jiroft region), Kerman province, Southeastern Iran, for diagnosis of an unusual ear decay. A fungus was isolated from the rotting kernels and subsequently identified as Geotrichum candidum. The fungal pathogen was found to be closely related to G. citri-aurantii (citrus race) based on morphological, physiological and pathogenicity properties. The fungal pathogenicity test was demonstrated by fulfilling Koch's postulates. The pathogen caused rot disease on husk looseness corn kernels in soft-dough stage of ripening. The fungus was also pathogenic on ripe lemon and green and ripe tomato fruits. Fungal isolates of corn were compared to isolates from soft-rotten potato tubers. These two groups of isolates were highly similar on the basis of their morphological, biochemical and pathogenicity characteristics. To our knowledge, this is the first known report of corn ear rot caused by G. candidum in the world.

  8. Fine-mapping of qRfg2, a QTL for resistance to Gibberella stalk rot in maize.

    PubMed

    Zhang, Dongfeng; Liu, Yongjie; Guo, Yanling; Yang, Qin; Ye, Jianrong; Chen, Shaojiang; Xu, Mingliang

    2012-02-01

    Stalk rot is one of the most devastating diseases in maize worldwide. In our previous study, two QTLs, a major qRfg1 and a minor qRfg2, were identified in the resistant inbred line '1145' to confer resistance to Gibberella stalk rot. In the present study, we report on fine-mapping of the minor qRfg2 that is located on chromosome 1 and account for ~8.9% of the total phenotypic variation. A total of 22 markers were developed in the qRfg2 region to resolve recombinants. The progeny-test mapping strategy was developed to accurately determine the phenotypes of all recombinants for fine-mapping of the qRfg2 locus. This fine-mapping process was performed from BC(4)F(1) to BC(8)F(1) generations to narrow down the qRfg2 locus into ~300 kb, flanked by the markers SSRZ319 and CAPSZ459. A predicted gene in the mapped region, coding for an auxin-regulated protein, is believed to be a candidate for qRfg2. The qRfg2 locus could steadily increase the resistance percentage by ~12% across different backcross generations, suggesting its usefulness in enhancing maize resistance against Gibberella stalk rot. PMID:22048640

  9. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.

    PubMed

    Quibod, Ian Lorenzo; Grande, Genelou; Oreiro, Eula Gems; Borja, Frances Nikki; Dossa, Gerbert Sylvestre; Mauleon, Ramil; Cruz, Casiana Vera; Oliva, Ricardo

    2015-01-01

    Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI) and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments.

  10. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot

    PubMed Central

    Quibod, Ian Lorenzo; Grande, Genelou; Oreiro, Eula Gems; Borja, Frances Nikki; Dossa, Gerbert Sylvestre; Mauleon, Ramil; Cruz, Casiana Vera; Oliva, Ricardo

    2015-01-01

    Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI) and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments. PMID:26422147

  11. The 'Dr Jekyll and Mr Hyde fungus': noble rot versus gray mold symptoms of Botrytis cinerea on grapes.

    PubMed

    Fournier, Elisabeth; Gladieux, Pierre; Giraud, Tatiana

    2013-09-01

    Many cryptic species have recently been discovered in fungi, especially in fungal plant pathogens. Cryptic fungal species co-occurring in sympatry may occupy slightly different ecological niches, for example infecting the same crop plant but specialized on different organs or having different phenologies. Identifying cryptic species in fungal pathogens of crops and determining their ecological specialization are therefore crucial for disease management. Here, we addressed this question in the ascomycete Botrytis cinerea, the agent of gray mold on a wide range of plants. On grape, B. cinerea causes severe damage but is also responsible for noble rot used for processing sweet wines. We used microsatellite genotyping and clustering methods to elucidate whether isolates sampled on gray mold versus noble rot symptoms in three French regions belong to genetically differentiated populations. The inferred population structure matched geography rather than the type of symptom. Noble rot symptoms therefore do not seem to be caused by a specific B. cinerea population but instead seem to depend essentially on microclimatic conditions, which has applied consequences for the production of sweet wines. PMID:24062804

  12. The ‘Dr Jekyll and Mr Hyde fungus’: noble rot versus gray mold symptoms of Botrytis cinerea on grapes

    PubMed Central

    Fournier, Elisabeth; Gladieux, Pierre; Giraud, Tatiana

    2013-01-01

    Many cryptic species have recently been discovered in fungi, especially in fungal plant pathogens. Cryptic fungal species co-occurring in sympatry may occupy slightly different ecological niches, for example infecting the same crop plant but specialized on different organs or having different phenologies. Identifying cryptic species in fungal pathogens of crops and determining their ecological specialization are therefore crucial for disease management. Here, we addressed this question in the ascomycete Botrytis cinerea, the agent of gray mold on a wide range of plants. On grape, B. cinerea causes severe damage but is also responsible for noble rot used for processing sweet wines. We used microsatellite genotyping and clustering methods to elucidate whether isolates sampled on gray mold versus noble rot symptoms in three French regions belong to genetically differentiated populations. The inferred population structure matched geography rather than the type of symptom. Noble rot symptoms therefore do not seem to be caused by a specific B. cinerea population but instead seem to depend essentially on microclimatic conditions, which has applied consequences for the production of sweet wines. PMID:24062804

  13. Fine-mapping of qRfg2, a QTL for resistance to Gibberella stalk rot in maize.

    PubMed

    Zhang, Dongfeng; Liu, Yongjie; Guo, Yanling; Yang, Qin; Ye, Jianrong; Chen, Shaojiang; Xu, Mingliang

    2012-02-01

    Stalk rot is one of the most devastating diseases in maize worldwide. In our previous study, two QTLs, a major qRfg1 and a minor qRfg2, were identified in the resistant inbred line '1145' to confer resistance to Gibberella stalk rot. In the present study, we report on fine-mapping of the minor qRfg2 that is located on chromosome 1 and account for ~8.9% of the total phenotypic variation. A total of 22 markers were developed in the qRfg2 region to resolve recombinants. The progeny-test mapping strategy was developed to accurately determine the phenotypes of all recombinants for fine-mapping of the qRfg2 locus. This fine-mapping process was performed from BC(4)F(1) to BC(8)F(1) generations to narrow down the qRfg2 locus into ~300 kb, flanked by the markers SSRZ319 and CAPSZ459. A predicted gene in the mapped region, coding for an auxin-regulated protein, is believed to be a candidate for qRfg2. The qRfg2 locus could steadily increase the resistance percentage by ~12% across different backcross generations, suggesting its usefulness in enhancing maize resistance against Gibberella stalk rot.

  14. The development of a sensor system for the early detection of soft rot in stored potato tubers

    NASA Astrophysics Data System (ADS)

    de Lacy Costello, B. P. J.; Ewen, R. J.; Gunson, H. E.; Ratcliffe, N. M.; de Lacy Costello, B. P. J.; Ewen, R. J.; Gunson, H. E.; Spencer-Phillips, P. T. N.

    2000-12-01

    A number of sensor types were fabricated and tested for their electrical resistance changes to compounds known to be evolved by potato tubers with soft rot caused by the bacterium Erwinia carotovora. On the basis of these tests, three sensors were selected for incorporation into a prototype device. The device was portable and could be used without computer control after threshold values and sensor settling criteria had been downloaded. The prototype was assessed for its discriminating power under simulated storage conditions. The device was capable of detecting one tuber with soft rot in 100 kg of sound tubers in a simulated storage crate. The device was also able to detect a tuber inoculated with E. carotovora, but without visible signs of soft rot, within 10 kg of sound tubers. The same system was able to follow the progression of the disease in a tuber stored amongst 10 kg of sound tubers when operated at 4 °C and 85% relative humidity (conditions typical of a refrigerated storage facility).

  15. Wide variation in virulence and genetic diversity of binucleate Rhizoctonia isolates associated with root rot of strawberry in Western Australia.

    PubMed

    Fang, Xiangling; Finnegan, Patrick M; Barbetti, Martin J

    2013-01-01

    Strawberry (Fragaria×ananassa) is one of the most important berry crops in the world. Root rot of strawberry caused by Rhizoctonia spp. is a serious threat to commercial strawberry production worldwide. However, there is no information on the genetic diversity and phylogenetic status of Rhizoctonia spp. associated with root rot of strawberry in Australia. To address this, a total of 96 Rhizoctonia spp. isolates recovered from diseased strawberry plants in Western Australia were characterized for their nuclear condition, virulence, genetic diversity and phylogenetic status. All the isolates were found to be binucleate Rhizoctonia (BNR). Sixty-five of the 96 BNR isolates were pathogenic on strawberry, but with wide variation in virulence, with 25 isolates having high virulence. Sequence analysis of the internal transcribed spacers of the ribosomal DNA separated the 65 pathogenic BNR isolates into six distinct clades. The sequence analysis also separated reference BNR isolates from strawberry or other crops across the world into clades that correspond to their respective anastomosis group (AG). Some of the pathogenic BNR isolates from this study were embedded in the clades for AG-A, AG-K and AG-I, while other isolates formed clades that were sister to the clades specific for AG-G, AG-B, AG-I and AG-C. There was no significant association between genetic diversity and virulence of these BNR isolates. This study demonstrates that pathogenic BNR isolates associated with root rot of strawberry in Western Australia have wide genetic diversity, and highlights new genetic groups not previously found to be associated with root rot of strawberry in the world (e.g., AG-B) or in Australia (e.g., AG-G). The wide variation in virulence and genetic diversity identified in this study will be of high value for strawberry breeding programs in selecting, developing and deploying new cultivars with resistance to these multi-genetic groups of BNR. PMID:23405226

  16. Wide variation in virulence and genetic diversity of binucleate Rhizoctonia isolates associated with root rot of strawberry in Western Australia.

    PubMed

    Fang, Xiangling; Finnegan, Patrick M; Barbetti, Martin J

    2013-01-01

    Strawberry (Fragaria×ananassa) is one of the most important berry crops in the world. Root rot of strawberry caused by Rhizoctonia spp. is a serious threat to commercial strawberry production worldwide. However, there is no information on the genetic diversity and phylogenetic status of Rhizoctonia spp. associated with root rot of strawberry in Australia. To address this, a total of 96 Rhizoctonia spp. isolates recovered from diseased strawberry plants in Western Australia were characterized for their nuclear condition, virulence, genetic diversity and phylogenetic status. All the isolates were found to be binucleate Rhizoctonia (BNR). Sixty-five of the 96 BNR isolates were pathogenic on strawberry, but with wide variation in virulence, with 25 isolates having high virulence. Sequence analysis of the internal transcribed spacers of the ribosomal DNA separated the 65 pathogenic BNR isolates into six distinct clades. The sequence analysis also separated reference BNR isolates from strawberry or other crops across the world into clades that correspond to their respective anastomosis group (AG). Some of the pathogenic BNR isolates from this study were embedded in the clades for AG-A, AG-K and AG-I, while other isolates formed clades that were sister to the clades specific for AG-G, AG-B, AG-I and AG-C. There was no significant association between genetic diversity and virulence of these BNR isolates. This study demonstrates that pathogenic BNR isolates associated with root rot of strawberry in Western Australia have wide genetic diversity, and highlights new genetic groups not previously found to be associated with root rot of strawberry in the world (e.g., AG-B) or in Australia (e.g., AG-G). The wide variation in virulence and genetic diversity identified in this study will be of high value for strawberry breeding programs in selecting, developing and deploying new cultivars with resistance to these multi-genetic groups of BNR.

  17. Improved control of anthracnose rot in loquat fruit by a combination treatment of Pichia membranifaciens with CaCl(2).

    PubMed

    Cao, Shifeng; Zheng, Yonghua; Tang, Shuangshuang; Wang, Kaituo

    2008-08-15

    The beneficial effect of 2% CaCl(2) (w/v) on the antagonistic yeast Pichia membranifaciens for control of anthracnose rot caused by Colletotrichum acutatum in postharvest loquat fruit (Eriobotrya japonica L.) and the possible mechanisms involved were investigated. The results showed that treatment with P. membranifaciens at 1x10(8) CFU ml(-1) or 2% CaCl(2) alone both resulted in significantly smaller lesion diameter and lower disease incidence of anthracnose rot on loquat fruit wounds compared with the controls. The biocontrol activity of P. membranifaciens on the disease was enhanced by the addition of 2% CaCl(2), the combined treatment of P. membranifaciens with CaCl(2) resulted in a remarkably improved control of the disease in comparison with the treatment of P. membranifaciens or CaCl(2) alone. P. membranifaciens in combination with CaCl(2) induced higher activities of two defense-related enzymes chitinase and beta-1,3-glucanase in loquat fruit than applying the yeast or CaCl(2) alone. The in vitro experiment showed that the addition of 2% CaCl(2) in the suspensions of P. membranifaciens significantly inhibited spore germination and germ tube elongation of C. acutatum than the yeast or CaCl(2) alone. However, adding CaCl(2) did not significantly influence the population of P. membranifaciens in NYDB medium or fruit wounds. These results suggest that CaCl(2) could improve the biocontrol activity of P. membranifaciens on anthracnose rot in loquat fruit. It is postulated that the improved control of the disease is directly because of the higher inhibitory effect on pathogen growth and indirectly because of the enhanced disease resistance in loquat fruit by the combination treatment.

  18. Diversity study on Sclerotinia trifoliorum Erikks., the causal agent of clover rot in red clover crops (Trifolium pratense L.).

    PubMed

    Vleugels, T; Baert, J; De Riek, J; Heungens, K; Malengier, M; Cnops, G; Van Bockstaele, E

    2010-01-01

    Since the 16th century, red clover has been an important crop in Europe. Since the 1940s, the European areal of red clover has been severely reduced, due to the availability of chemical fertilizers and the growing interest in maize. Nowadays there is a growing interest in red clover again, although some setbacks still remain. An important setback is the low persistence of red clover crops. Clover rot, caused by the ascomycete fungus Sclerotinia trifoliorum Erikss., is a major disease in Europe and reduces the persistence of red clover crops severely. The fungus infects clover plants through ascospores in the autumn, the disease develops during the winter and early spring and can kill many plants in this period. In early spring, black sclerotia, serving as surviving bodies, are formed on infected plants. Sclerotia can survive up to 7 years in the soil (Ohberg, 2006). The development of clover rot is highly dependent on the weather conditions: a humid fall, necessary for the germination of the ascospores and an overall warm winter with short periods of frost are favourable for the disease. Cold and dry winters slow the mycelial growth down too much and prevent the disease from spreading. Clover rot is difficult to control and completely resistant red clover varieties have yet to be developed. Because of the great annual variation in disease severity, plant breeders cannot use natural infection as an effective means to screen for resistant material. Breeding for resistant cultivars is being slowed down by the lack of a bio-test usable in breeding programs. When applying artificial infections, it is necessary to have an idea of the diversity of the pathogen. A diverse population will require resistance screening with multiple isolates. The objective of this research is to investigate the genetic diversity among isolates from the pathogen S. trifoliorum from various European countries. We assessed diversity using a species identification test based on the sequence of

  19. Research on dye wastewater decoloration by pulse discharge plasma combined with charcoal derived from spent tea leaves.

    PubMed

    Wang, Tiecheng; Qu, Guangzhou; Pei, Shuzhao; Liang, Dongli; Hu, Shibin

    2016-07-01

    Pulsed discharge plasma (PDP) combined with charcoal (PDP-charcoal) was employed to treat dye wastewater, with methyl orange (MO) as the model pollutant. The charcoal was prepared using spent tea leaves and was characterized by scanning electron microscopy, Fourier-transform infrared spectroscopy, and Boehm titration to investigate the adsorption and catalytic characteristics before and after adsorption and PDP treatment. The prepared charcoal exhibited a high MO adsorption capacity, and the adsorption process followed the pseudo-second-order kinetic model and the Freundlich model. The MO decoloration efficiency reached 69.8 % within 7.5 min of treatment in the PDP-charcoal system, whereas values of 29.2 and 25.9 % were achieved in individual PDP and charcoal systems, respectively. The addition of n-butanol and H2PO4 (-) presented inhibitive effects on MO decoloration in the PDP system. However, these effects were much weaker in the PDP-charcoal system. In addition, the effects of charcoal on O3 and H2O2 formation were evaluated, and the results showed that both the O3 and H2O2 concentrations decreased in the presence of charcoal. The MO decomposition intermediates were analyzed using UV-Vis spectrometry and GC-MS. 1,4-Benzoquinone, 4-nitrophenol, 4-hydroxyaniline, and N,N'-dimethylaniline were detected. A possible pathway for MO decomposition in this system was proposed. PMID:27026548

  20. Research on dye wastewater decoloration by pulse discharge plasma combined with charcoal derived from spent tea leaves.

    PubMed

    Wang, Tiecheng; Qu, Guangzhou; Pei, Shuzhao; Liang, Dongli; Hu, Shibin

    2016-07-01

    Pulsed discharge plasma (PDP) combined with charcoal (PDP-charcoal) was employed to treat dye wastewater, with methyl orange (MO) as the model pollutant. The charcoal was prepared using spent tea leaves and was characterized by scanning electron microscopy, Fourier-transform infrared spectroscopy, and Boehm titration to investigate the adsorption and catalytic characteristics before and after adsorption and PDP treatment. The prepared charcoal exhibited a high MO adsorption capacity, and the adsorption process followed the pseudo-second-order kinetic model and the Freundlich model. The MO decoloration efficiency reached 69.8 % within 7.5 min of treatment in the PDP-charcoal system, whereas values of 29.2 and 25.9 % were achieved in individual PDP and charcoal systems, respectively. The addition of n-butanol and H2PO4 (-) presented inhibitive effects on MO decoloration in the PDP system. However, these effects were much weaker in the PDP-charcoal system. In addition, the effects of charcoal on O3 and H2O2 formation were evaluated, and the results showed that both the O3 and H2O2 concentrations decreased in the presence of charcoal. The MO decomposition intermediates were analyzed using UV-Vis spectrometry and GC-MS. 1,4-Benzoquinone, 4-nitrophenol, 4-hydroxyaniline, and N,N'-dimethylaniline were detected. A possible pathway for MO decomposition in this system was proposed.

  1. Charcoal-induced granuloma that mimicked a nodal metastasis on ultrasonography and FDG-PET/CT after neck dissection.

    PubMed

    Choi, Jin Woo; Moon, Won-Jin; Choi, Nami; Roh, Hong Gee; Kim, Mi Young; Kim, Na Ra; Moon, Sung Gyu; Chung, Hyun Woo; Lim, So Dug; Yang, Jung-Hyun

    2015-01-01

    Charcoal can be used for preoperative localization of metastatic lymph nodes in the neck. Charcoal remains stable without causing foreign body reactions during as hort period. However, foreign body reactions may develop if charcoal is left in situ for more than 6 months. We reported a case of charcoal granuloma mimicking local recurrence on fluorodeoxyglucose-positron emission tomography/computed tomography and ultrasonography in a 47-year-old woman who had cervical lymph node dissection due to metastatic invasive ductal carcinoma of the breast.

  2. Effectiveness of preharvest applications of fungicides on preharvest bunch rot and postharvest sour rot of ‘Redglobe’ grapes

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Postharvest sour rot of ‘Redglobe’ grapes, also called “non-Botrytis slip skin”, “breakdown disorder”, “soft tissue breakdown”, or “melting decay” has affected this cultivar worldwide. The disorder causes berries to discolor, split, lose internal structure, and decay from veraison to harvest (Camero...

  3. Charcoal and the Record of Fire-related Sedimentation in Holocene Alluvial Sediments

    NASA Astrophysics Data System (ADS)

    Meyer, G. A.

    2006-12-01

    Over the last few decades, rising temperatures and ensuing severe wildfires in the western USA cordillera have provided the opportunity to examine processes and deposits of postfire sedimentation on alluvial fans and floodplains. Most events are generated by widespread surface runoff from intense convective-storm precipitation on severely burned slopes. Flow processes range from debris flow to sediment-charged water floods. Muddy debris flows best preserve coarse charcoal in fan deposits, whereas gravelly debris flows often comminute charcoal into fine particles. As charcoal remains suspended in high-energy hyperconcentrated and water floods, only their fine-grained deposits typically contain much charcoal. Charcoal is locally concentrated in low-energy fluvial deposits, but displays increasing evidence for reworking with distance from source. Charred vegetation and litter marking burned soil surfaces may be preserved under postfire fan and fluvial sediments. Modern deposits provide models for identification of Holocene fire-related sediments and estimates of paleofire severity. AMS 14C dating of discrete charcoal fragments allows sample selection to minimize errors of sample age > fire age. Fires are incompletely recorded in the event stratigraphy of one fan, but larger populations of 14C ages from numerous fans permit composite probability distributions that represent centennial- to millennial-scale changes in fire-related sedimentation across a study area. Records from Yellowstone and central Idaho indicate the large role of fire in episodic erosion across a range of conifer forests, most strongly during severe, multidecadal droughts in warmer periods (e.g. in Medieval time 900-1300 AD). In central Idaho, identification of charcoal macrofossils indicates broadly similar, aspect-controlled forest compositions over the last 3000 yr. Emerging data from the Sacramento Mountains, New Mexico, show rapid fan aggradation due to fire-related events in the warm middle

  4. Chemical recalcitrance of biochar and wildfire charcoal: how similar are they?

    NASA Astrophysics Data System (ADS)

    Santin, Cristina; Doerr, Stefan H.; Merino, Agustin

    2016-04-01

    The enhanced chemical resistance to biological degradation of pyrogenic materials, either produced during wildfires (charcoal) or by man (biochar), makes them long-term carbon sinks once incorporated in soils. In spite of their fundamental similarities, studies comparing the chemical recalcitrance of biochar and wildfire charcoal are scarce because analogous materials for accurate comparison are not easily available. Using solid-state 13C cross polarization-magic angle spinning nuclear magnetic resonance spectroscopy we characterized the chemical recalcitrance of pyrogenic materials generated from the same unburnt feedstooks (litter and dead wood from Pinus banksiana): (a) charcoal from a high-intensity wildfire and (b) biochar obtained by slow pyrolysis [3 treatments: 2 h at 350, 500 and 650°C]. For quantification, the spectra were divided into four regions representing different chemical environments of the 13C nucleus: alkyl C (0-45 ppm), O-alkyl C (45-110 ppm), olefinic and aromatic C(110-160 ppm), and carbonyl C (160-210 ppm). As an indicator of chemical recalcitrance, the degree of aromaticity (%) was calculated as follow: aromatic-C ∗ 100 / (alkyl C+ O alkyl-C + aromatic-C). The pyrogenic materials derived from wood show higher degrees of aromaticity (68 to 88%) than pyrogenic material derived from litter (40 to 88%). When comparing biochar and wildfire charcoal, biochars produced at 500 and 650°C always have higher degrees of aromaticity than wildfire charcoals, irrespective of the original feedstock. Wildfire charcoals always show a more heterogeneous chemical composition, with alkyl and O-alkyl compounds present even in charcoal generated at very high temperatures (temperatures up to 950 °C were recorded on the litter surface during the wildfire). However, biochars produced at 500 and 650 °C are mostly aromatic, and only the biochars produced at 350 °C show partial contribution of alkyl-C compounds. Our results suggest that biochar-type pyrogenic

  5. Dynamics and functions of bacterial communities in bark, charcoal and sand filters treating greywater.

    PubMed

    Dalahmeh, Sahar S; Jönsson, Håkan; Hylander, Lars D; Hui, Nan; Yu, Dan; Pell, Mikael

    2014-05-01

    This study explored the effects of greywater application on the dynamics and functions of biofilms developed in bark, activated charcoal and sand filters used for removal of organic matter and nitrogen. Duplicate columns (20 cm diameter, 60 cm deep) were packed with bark, charcoal or sand with effective size 1.4 mm and uniformity coefficient 2.2, and dosed with 32 L m(-2) day(-1) of an artificial greywater (14 g BOD5 m(-2) day(-1)) for 116 days. Potential respiration rate (PRR), determined in filter samples after addition of excess glucose, and bacterial diversity and composition, analysed by 454-pyrosequencing of bacterial 16S ribosomal DNA, were measured at different times and depths in the filters. The bark and charcoal filters were more efficient in removing BOD5 than the sand (98, 97% and 75%, respectively). The highest PRR in the 0-2 cm layer of the columns on day 84 was found in the bark filters, followed by the charcoal and sand filters (632 ± 66, 222 ± 34 and 56 ± 2 mg O2 L(-1), respectively; n = 2). Bacterial community in the bark filters showed the highest richness. The charcoal and sand filters both developed more diverse and dynamic (changing over time and depth) bacterial communities than the bark. In addition to the greywater, the lignocelluosic composition of the bark and its lower pH probably selected for the bacterial community structure and the organic content provided additional substrate, as shown by its higher PRR and its different nitrifying bacterial genera. In the oligotrophic charcoal and sand, the composition of the greywater itself defined the bacterial community. Thus, the initially low bacterial biomass in the latter filters was enriched over time, allowing a diversified bacterial community to develop. The top layers of the bark and charcoal filters displayed a high dominance of Rhizobium, Pseudomonas and Acinetobacter, which were less evident in the 60 cm layer, whereas in the sand filters these genera were

  6. Effect of potting mix microbial carrying capacity on biological control of rhizoctonia damping-off of radish and rhizoctonia crown and root rot of poinsettia.

    PubMed

    Krause, M S; Madden, L V; Hoitink, H A

    2001-11-01

    ABSTRACT Potting mixes prepared with dark, highly decomposed Sphagnum peat, with light, less decomposed Sphagnum peat, or with composted pine bark, all three of which were colonized by indigenous microorganisms, failed to consistently suppress Rhizoctonia damping-off of radish or Rhizoctonia crown and root rot of poinsettia. Inoculation of these mixes with Chryseobacterium gleum (C(299)R(2)) and Trichoderma hamatum 382 (T(382)) significantly reduced the severity of both diseases in the composted pine bark mix in which both biocontrol agents maintained high populations over 90 days. These microorganisms were less effective against damping-off in the light and dark peat mixes, respectively, in which populations of C(299)R(2) declined. In contrast, crown and root rot, a disease that is severe late in the crop, was suppressed in all three types of mixes. High populations of T(382) in all three mixes late during the cropping cycle may have contributed to control of this disease. PMID:18943449

  7. Effect of potting mix microbial carrying capacity on biological control of rhizoctonia damping-off of radish and rhizoctonia crown and root rot of poinsettia.

    PubMed

    Krause, M S; Madden, L V; Hoitink, H A

    2001-11-01

    ABSTRACT Potting mixes prepared with dark, highly decomposed Sphagnum peat, with light, less decomposed Sphagnum peat, or with composted pine bark, all three of which were colonized by indigenous microorganisms, failed to consistently suppress Rhizoctonia damping-off of radish or Rhizoctonia crown and root rot of poinsettia. Inoculation of these mixes with Chryseobacterium gleum (C(299)R(2)) and Trichoderma hamatum 382 (T(382)) significantly reduced the severity of both diseases in the composted pine bark mix in which both biocontrol agents maintained high populations over 90 days. These microorganisms were less effective against damping-off in the light and dark peat mixes, respectively, in which populations of C(299)R(2) declined. In contrast, crown and root rot, a disease that is severe late in the crop, was suppressed in all three types of mixes. High populations of T(382) in all three mixes late during the cropping cycle may have contributed to control of this disease.

  8. In vitro analysis of the effect of supplementation with activated charcoal on the equine hindgut.

    PubMed

    Edmunds, J L; Worgan, H J; Dougal, K; Girdwood, S E; Douglas, J-L; McEwan, N R

    2016-01-01

    The present study uses in vitro analytical techniques to investigate the effect of activated charcoal on the microbial community of the equine hindgut and the metabolites they produce. Incubations were performed in Wheaton bottles using a 50 ml incubation of a high-energy feed or a low-energy feed, plus bottles with no added food source, together with five levels of activated charcoal (0, 10, 25, 50 or 100 mg per bottle) and fecal samples as a bacterial inoculum. Using this method the rate of gas production, volatile fatty acid and ammonia concentrations, and pH values were analyzed and found to vary depending on the addition of feed, but the activated charcoal had no effect (P>0.05) on any of these. It is already believed that the effect of activated charcoal as a control for toxic substances is at its highest in the foregut or midgut of animals, and therefore should have little impact on the hindgut. The data presented here suggest that if any of the activated charcoal does reach the hindgut, then it has no significant impact on the microbial community present, nor on the major metabolites produced, and so should not have a detrimental effect on the principal site of fermentation in the horse.

  9. Contribution of sorbitol combined with activated charcoal in prevention of salicylate absorption.

    PubMed

    Keller, R E; Schwab, R A; Krenzelok, E P

    1990-06-01

    The use of cathartics and activated charcoal in treating toxic ingestions has become a standard treatment modality. Sorbitol has been shown to be the most rapidly acting cathartic, but its therapeutic significance has been debated. Using a previously described aspirin overdose model, ten healthy volunteers participated in a crossover design study that investigated the effect of activated charcoal alone versus that of activated charcoal and sorbitol in preventing salicylate absorption. In phase 1 of the study, subjects consumed 2.5 g aspirin followed by 25 g activated charcoal one hour later. Urine was collected for 48 hours and analyzed for quantitative salicylate metabolites. Phase 2 was identical except that 1.5 g/kg sorbitol was consumed with the activated charcoal. The mean amount of aspirin absorbed without the use of sorbitol was 1.26 +/- 0.15 g, whereas the mean absorption was 0.912 +/- 0.18 g with the addition of sorbitol. This is a 28% decrease in absorption of salicylates attributable to the use of sorbitol. The difference is significant at P less than .05 by the paired Student's t test. This study demonstrates that the addition of sorbitol significantly decreases drug absorption in a simulated drug overdose model. Effects on absorption in actual overdose situations and on patient outcome should be the subjects of further study. PMID:2188536

  10. Preoperative colonic lesion localization with charcoal nanoparticle tattooing for laparoscopic colorectal surgery.

    PubMed

    Wang, Wen; Wang, Rong; Wang, Yu; Yu, Li; Li, Dazhou; Huang, Sheng; Ma, Jun; Lin, Nan; Yang, Weijin; Chen, Xin; Liu, Bin; Lv, Ren; Liao, Lianming

    2013-12-01

    The efficiency and safety of charcoal nanoparticle tattooing in localizing unpalpable colonic small lesions for later laparoscopy is described. Twenty six patients were enrolled for this prospective study. Tumor sites were localized with charcoal nanoparticles during colonoscopy for later laparoscopic colorectal operations. In all patients, the entire colon was examined preoperatively by colonoscopy and 0.5 ml (5 mg) of charcoal nanoparticle was injected submucosally near lesions or polypectomy sites. During laparoscopic colorectal operations for these biopsy-proven tumors, tumors were easily identified. The mean resection margin was 3.13 +/- 2.01 cm. The mean length of resected intestinal segment was 12.69 +/- 4.39 cm. No tumor was found at the resection line as indicated by postoperative pathological examination. Most importantly, no wrong segment was resected. Thus we show that easy identification of tumor can be achieved by preoperative tattooing with charcoal nanoparticles. Further studies regarding the long-term tattooing of tumor with charcoal nanoparticles are warranted.

  11. In vitro analysis of the effect of supplementation with activated charcoal on the equine hindgut

    PubMed Central

    EDMUNDS, J.L.; WORGAN, H.J.; DOUGAL, K.; GIRDWOOD, S.E.; DOUGLAS, J.-L.; MCEWAN, N.R.

    2016-01-01

    ABSTRACT The present study uses in vitro analytical techniques to investigate the effect of activated charcoal on the microbial community of the equine hindgut and the metabolites they produce. Incubations were performed in Wheaton bottles using a 50 ml incubation of a high-energy feed or a low-energy feed, plus bottles with no added food source, together with five levels of activated charcoal (0, 10, 25, 50 or 100 mg per bottle) and fecal samples as a bacterial inoculum. Using this method the rate of gas production, volatile fatty acid and ammonia concentrations, and pH values were analyzed and found to vary depending on the addition of feed, but the activated charcoal had no effect (P>0.05) on any of these. It is already believed that the effect of activated charcoal as a control for toxic substances is at its highest in the foregut or midgut of animals, and therefore should have little impact on the hindgut. The data presented here suggest that if any of the activated charcoal does reach the hindgut, then it has no significant impact on the microbial community present, nor on the major metabolites produced, and so should not have a detrimental effect on the principal site of fermentation in the horse. PMID:27330398

  12. Tailoring the characteristics of carbonized wood charcoal by using different heating rates

    NASA Astrophysics Data System (ADS)

    Kwon, Gu-Joong; Kim, Dae-Young; Oh, Choong-Hyeon; Park, Byung-Ho; Kang, Joo-Hyon

    2014-05-01

    This study examined the characteristics of charcoals generated from White Lauan ( Pentacmecontorta) and Punah ( Tetrameristaglabra) by using different carbonization temperatures and heating rates. The scanning electron micrographs showed vestured pits in the White Lauan and raphide crystals in Punah as their respective anatomical characteristics. A slower heating rate resulted in a lower temperature to obtain the same amount of weight loss, regardless of the species being tested. A greater charcoal yield was obtained at a higher heating rate. The specific surface area was smaller in the charcoal produced at a higher carbonization temperature, but the heating rate had little effected. For both wood species, the axial compressive strength of the charcoal increased as the carbonization temperature was increased. The X-ray diffractograms of White Lauan and Punah woods heated at 1200°C indicated thermal decomposition of the crystal structure of cellulose, but no appreciable structural changes occurred under the tested heating rate conditions. Overall, the heating rate affected the charcoal yield but not the specific surface area, compressive strength, and crystal structure.

  13. In vitro analysis of the effect of supplementation with activated charcoal on the equine hindgut.

    PubMed

    Edmunds, J L; Worgan, H J; Dougal, K; Girdwood, S E; Douglas, J-L; McEwan, N R

    2016-01-01

    The present study uses in vitro analytical techniques to investigate the effect of activated charcoal on the microbial community of the equine hindgut and the metabolites they produce. Incubations were performed in Wheaton bottles using a 50 ml incubation of a high-energy feed or a low-energy feed, plus bottles with no added food source, together with five levels of activated charcoal (0, 10, 25, 50 or 100 mg per bottle) and fecal samples as a bacterial inoculum. Using this method the rate of gas production, volatile fatty acid and ammonia concentrations, and pH values were analyzed and found to vary depending on the addition of feed, but the activated charcoal had no effect (P>0.05) on any of these. It is already believed that the effect of activated charcoal as a control for toxic substances is at its highest in the foregut or midgut of animals, and therefore should have little impact on the hindgut. The data presented here suggest that if any of the activated charcoal does reach the hindgut, then it has no significant impact on the microbial community present, nor on the major metabolites produced, and so should not have a detrimental effect on the principal site of fermentation in the horse. PMID:27330398

  14. Detection of Dichelobacter nodosus in wild ungulates (Capra ibex ibex and Ovis aries musimon) and domestic sheep suffering from foot rot using a two-step polymerase chain reaction.

    PubMed

    Belloy, Luc; Giacometti, Marco; Boujon, Patrick; Waldvogel, Andreas

    2007-01-01

    Severe keratinous hoof afflictions have been recorded in ibex (Capra ibex ibex) since 1995 and more recently in mouflon (Ovis aries musimon) in Switzerland. Based on clinical observations and comparison with diseases known to affect domestic ungulates, it was hypothesized these wild ungulates were affected by foot rot associated with infection with Dichelobacter nodosus. Dichelobacter nodosus has been shown to be the essential pathogen for initiation and establishment of foot rot, a highly contagious foot disease of sheep and goats. Because these bacteria could not be cultivated from affected ibex, we developed a nested polymerase chain reaction that allowed detection of D. nodosus without culture. Using this assay, we were able to diagnose D. nodosus infections of ibex, mouflon, and domestic sheep in natural outbreaks. From these results we conclude that D. nodosus plays an etiological role in foot rot not only in domestic but also in wild Caprinae.

  15. Indicators of climate change effects: Relationships between crown transparency and butt rot in silver fir (Abies alba Mill.) in Middle Italy

    NASA Astrophysics Data System (ADS)

    D'Aprile, Fabrizio; Tapper, Nigel

    2014-05-01

    Climatic analysis conducted on the trends and changes in temperature and rainfall during the 20th century in the Tuscan Apennine Alps (Middle Italy) have highlighted the possibility that these changes have a significant impact on the growth and/or health conditions or stress in silver fir (Abies alba Mill.). In this framework, identification of appropriate indicators to verify relationships between stress symptoms, which are frequently caused by climate adverse conditions, and pathological phenomena is a necessary step functional to the identification of climatic-environmental impacts on forests. The presence of butt rot pathology - a complex disease that causes rotting of the trunk internally - in silver fir is known the time as well as its severity. Nonetheless, very little research on the potential effects of changing climate conditions on the diffusion and intensity of butt rot seems available; thus, effects of climate change seem to be not excluded nor verified. No research or studies that quantify distribution and incidence or, especially, relationships of butt rot with adverse climatic and/or environmental factors were found. However, climatic alterations can have an impact on the intensity and spread of serious disease complexes and therefore it is of great importance to investigate the relationships between climate changing conditions, diffusion and incidence of butt rot in silver fir forests for their conservation and the management of species and biodiversity associated. As butt rot unlikely could be directly related to climate variables, crown transparency has been used as a proxy for tree growth, where climate variability is assumed to be the main driver of silver fir growth and stress. Actually, crown transparency is considered to be a main factor associated to tree growth, and healthier trees are assumed to grow faster than less-healthy trees. Thus, theoretically denser crowns would correspond to faster growing and healthier trees and indicate better

  16. Draft Genome Sequences of the Onion Center Rot Pathogen Pantoea ananatis PA4 and Maize Brown Stalk Rot Pathogen P. ananatis BD442.

    PubMed

    Weller-Stuart, Tania; Chan, Wai Yin; Coutinho, Teresa A; Venter, Stephanus N; Smits, Theo H M; Duffy, Brion; Goszczynska, Teresa; Cowan, Don A; de Maayer, Pieter

    2014-08-07

    Pantoea ananatis is an emerging phytopathogen that infects a broad spectrum of plant hosts. Here, we present the genomes of two South African isolates, P. ananatis PA4, which causes center rot of onion, and BD442, isolated from brown stalk rot of maize.

  17. Draft Genome Sequences of the Onion Center Rot Pathogen Pantoea ananatis PA4 and Maize Brown Stalk Rot Pathogen P. ananatis BD442

    PubMed Central

    Weller-Stuart, Tania; Chan, Wai Yin; Venter, Stephanus N.; Smits, Theo H. M.; Duffy, Brion; Goszczynska, Teresa; Cowan, Don A.; de Maayer, Pieter

    2014-01-01

    Pantoea ananatis is an emerging phytopathogen that infects a broad spectrum of plant hosts. Here, we present the genomes of two South African isolates, P. ananatis PA4, which causes center rot of onion, and BD442, isolated from brown stalk rot of maize. PMID:25103759

  18. Highly stable rice-straw-derived charcoal in 3700-year-old ancient paddy soil: evidence for an effective pathway toward carbon sequestration.

    PubMed

    Wu, Mengxiong; Yang, Min; Han, Xingguo; Zhong, Ting; Zheng, Yunfei; Ding, Pin; Wu, Weixiang

    2016-01-01

    Recalcitrant charcoal application is predicted to decelerate global warming through creating a long-term carbon sink in soil. Although many studies have showed high stability of charcoal derived from woody materials, few have focused on the dynamics of straw-derived charcoal in natural environment on a long timescale to evaluate its potential for agricultural carbon sequestration. Here, we examined straw-derived charcoal in an ancient paddy soil dated from ~3700 calendar year before present (cal. year BP). Analytical results showed that soil organic matter consisted of more than 25% of charcoal in charcoal-rich layer. Similarities in morphology and molecular structure between the ancient and the fresh rice-straw-derived charcoal indicated that ancient charcoal was derived from rice straw. The lower carbon content, higher oxygen content, and obvious carbonyl of the ancient charcoal compared with fresh rice straw charcoal implied that oxidation occurred in the scale of thousands years. However, the dominant aromatic C of ancient charcoal indicated that rice-straw-derived charcoal was highly stable in the buried paddy soil due to its intrinsic chemical structures and the physical protection of ancient paddy wetland. Therefore, it may suggest that straw charcoal application is a potential pathway for C sequestration considering its longevity.

  19. Calibration of diffusion barrier charcoal detectors and application to radon sampling in dwellings

    NASA Astrophysics Data System (ADS)

    Cabrera, M. E. M.; Sujo, L. C.; Villalba, L.; Peinado, J. S.; Jimenez, A. C.; Baca, A. M.; Gandara, S. D.; Villalobos, M. R.; Miranda, A. L.; Peraza, E. F. H.

    2003-10-01

    Some calibration conditions of diffusion barrier charcoal canister (DBCC) detectors for measuring radon concentration in air were studied. A series of functional expressions and graphs were developed to describe relationship between radon concentration in air and the activity adsorbed in DBCC, when placed in small chambers. A semi-empirical expression for the DBCC calibration was obtained, based on the detector integration time and the adsorption coefficient of radon on activated charcoal. Both, the integration time for 10% of DBCC of the same batch, and the adsorption coefficient of radon for the activated charcoal used in these detectors, were experimentally determined. Using these values as the calibration parameters, a semi-empirical calibration function was used for the interpretation of the radon activities in the detectors used for sampling more than 200 dwellings in the major cities of the state of Chihuahua, Mexico.

  20. [Charcoal burners and carbon monoxide poisoning--help came from a scientific journal].

    PubMed

    Wasberg, G C

    2001-03-30

    The breakthrough for professional journals came in the 18th century. In 1972, Hans (Johannes) Möller (1736-96), a district physician in Bratsberg County, published an article in Topographisk Journal for Norge on carbon monoxide poisoning among charcoal burners, advising on the prevention of injuries and giving guidelines for treatment. This was in the heyday of Norwegian iron mills powered by charcoal, with charcoal burners paying a heavy price in the form of numerous fatal accidents. Möller's article was based on his experience with the local iron mill at Fritzøe. It solved a problem in this major branch of industry. Rationalist clergymen spread his advice among the general public for whom it was intended. Möller's scientific work also found an audience abroad. In 1801, five years after his death, the article was translated into German and published in a recognised German journal.

  1. Emissions of air toxics from a simulated charcoal kiln. Final report, October 1997--September 1998

    SciTech Connect

    Lemieux, P.M.

    1999-06-01

    The report gives results of experiments in a laboratory-scale charcoal kiln simulator to evaluate emissions of hazardous air pollutants from the production of charcoal in Missouri-type kilns. Fixed combustion gases were measured using continuous monitors. In addition, other pollutants, including methanol, volatile organic compounds, semivolatile organic compounds, and particle emission rates and size distributions were measured using various techniques. Emissions of all pollutants are reported in units of grams emitted per unit mass of initial wood converted to charcoal. Two burn conditions--slow and fast--were examined. High levels of methanol, benzene, and fine particulate were emitted in all tests. The estimated emissions from the fast burn conditions were significantly higher than those from the slow burn conditions.

  2. A means to make open-face charcoal detectors respond correctly to varying concentration radon fields

    SciTech Connect

    Distenfeld, C.H.

    1995-12-31

    Ronca-Battista and D. Gray 87, outlined the poor response of open-face charcoal detectors to varying concentration radon fields. At worst, for two day exposures with open-face charcoal canisters, their Table 4 indicated a 75% under-response for radon concentrations that were 10 times higher during the first day of two, 10:1. TCS has made similar measurements with open-faced and diffusion barrier detectors in 20:1, 1:20, and 1:1 fields. For the worst case 20:1, measurements indicate TCS two day open-face canisters under respond by 50%, while the Cohen and TCS diffusion barrier devices under responded by about 37%. The reasons for the under response are radon diffusion out of the charcoal due to the forces of lower concentration during the second half of the exposure, and uncompensated radioactive decay of radon gas.

  3. Development and optimization of the activated charcoal suspension composition based on a mixture design approach.

    PubMed

    Ronowicz, Joanna; Kupcewicz, Bogumiła; Pałkowski, Łukasz; Krysiński, Jerzy

    2015-03-01

    In this study, a new drug product containing activated charcoal was designed and developed. The excipient levels in the pharmaceutical formulation were optimized using a mixture design approach. The adsorption power of the activated charcoal suspension was selected as the critical quality attribute influencing the efficacy of medical treatment. Significant prognostic models (p<0.05) were obtained to describe in detail the interrelations between excipient levels and the adsorption power of the formulation. Liquid flavour had a critical impact on the adsorption power of the suspension. Formulations containing the largest amount of liquid flavour showed the lowest adsorption power. Sorbitol was not adsorbed onto activated charcoal so strongly as liquid flavour. A slight increase in the content of carboxymethylcellulose sodium led to a marked decrease in adsorption power. The obtained mathematical models and response surface allowed selection of the optimal composition of excipients in a final drug product.

  4. Analysis of alkyl nitrates and selected halocarbons in the ambient atmosphere using a charcoal preconcentration technique

    SciTech Connect

    Atlas, E.; Schauffler, S. )

    1991-01-01

    A method has been developed to measure {ge}C{sub 3} alkyl nitrates and C{sub 1}-C{sub 2} halocarbons, such as perchloroethylene and bromoform, in ambient air. The method preconcentrates analytes on a 5-mg charcoal trap from multiliter volumes of air. Analytes are desorbed from the charcoal with a small volume of solvent and are analyzed by high-resolution gas chromatography with electron capture detection. Laboratory and field tests have been performed to evaluate method precision, analyte breakthrough, and compound recovery from the charcoal. Tests verified that the sampling/analytical system is free from artifact formation under clean to moderately polluted conditions, but further tests are required for areas of high concentrations of hydrocarbons, NO{sub x}, and oxidants. The method allows measurement of halocarbons and {ge}C{sub 3} alkyl nitrates at concentrations in the pptv range.

  5. Molecular and structural properties of polymer composites filled with activated charcoal particles

    NASA Astrophysics Data System (ADS)

    Tahir, Dahlang; Liong, Syarifuddin; Bakri, Fahrul

    2016-03-01

    We have studied the molecular properties, structural properties, and chemical composition of composites by Fourier transform infrared (FTIR) spectroscopy, X-ray diffraction (XRD) spectroscopy, and X-ray fluorescence (XRF) spectroscopy, respectively. FTIR spectra shows absorption band of hydroxyl group (-OH), methyl group (-CH3) and aromatic group (C-C). The absorption band for aromatic group (C-C) shows the formation of carbonaceous in composites. XRF shows chemical composition of composites, which the main chemicals are SO3, Cl, and ZnO. The loss on ignition value (LOI) of activated charcoal indicates high carbonaceous matter. The crystallite size for diffraction pattern from hydrogel polymer is about 17 nm and for activated charcoal are about 19 nm. The crystallite size of the polymer is lower than that of activated charcoal, which make possible of the particle from filler in contact with each other to form continuous conducting polymer through polymer matrix.

  6. Evaluation of fructooligosaccharides separation using a fixed-bed column packed with activated charcoal.

    PubMed

    Kuhn, Raquel Cristine; Mazutti, Marcio A; Albertini, Lilian Buoro; Filho, Francisco Maugeri

    2014-05-25

    Recent studies have shown that the chromatographic separation of mixtures of saccharides may be improved by making use of activated charcoal, a promising low cost material for the separation of sugars, including fructooligosaccharides. In this work, the development of a methodology to separate fructooligosaccharides from glucose, fructose and sucrose, using a fixed bed column packed with activated charcoal is proposed. The influence of temperature, eluant concentration and step gradients were evaluated to increase the separation efficiency and fructooligosaccharide purity. The final degree of fructooligosaccharide purification and separation efficiency were about 94% and 3.03 respectively, using ethanol gradient concentration ranging from 3.5% to 15% (v/v) at 40°C. The fixed bed column packed with the activated charcoal was shown to be a promising alternative for sugar separation, mainly those rich in fructooligosaccharides, leading to solutions of acceptable degrees of purification.

  7. Emissions from street vendor cooking devices (charcoal grilling). Final report, January 1998--March 1999

    SciTech Connect

    Lee, S.Y.

    1999-06-01

    The report discusses a joint US/Mexican program to establish a reliable emissions inventory for street vendor cooking devices (charcoal grilling), a significant source of air pollutants in the Mexicali-Imperial Valley area of Mexico. Emissions from these devices, prevalent in the streets of Mexicali, Mexico, were investigated experimentally by measuring levels of particulate matter, particle size distributions, volatile and semivolatile organic compounds, aldehydes, and oxides of nitrogen and sulfur, emitted when meat is cooked on a grill over a charcoal fire. To investigate the emission rate, both beef and chicken were tested. Furthermore, both meats were marinated with a mixture similar to that used by the street vendors. Some tests were conducted with non-marinated beef for comparison. Two blank runs were performed sampling charcoal fires without meat. Finally, a simple control device, normally used in an exhaust fan to trap grease over a kitchen stove, was evaluated for its effectiveness in reducing emissions.

  8. Impact of ancient charcoal kilns on chemical properties of several forest soils after 2 centuries

    NASA Astrophysics Data System (ADS)

    Dufey, Joseph; Hardy, Brieuc; Cornelis, Jean-Thomas

    2014-05-01

    Pyrogenic carbon plays a major role in soil biogeochemical processes and carbon budgets. Until the early 19th century, charcoal was the unique combustible used for iron metallurgy in Wallonia (Belgium). Traditional charcoal kilns were built directly in the forest: wood logs were piled into a mound and isolated from air oxygen with a covering of vegetation residues and soil before setting fire, inducing wood pyrolysis. Nowadays, ancient wood-charring platforms are still easy to identify on the forest floor as heightened domes of 10 meters in diameter characterized by a very dark topsoil horizon containing charcoal dust and fragments. Our goal is to assess the effects of wood charring at mound kiln sites on the properties of various forest soil types in Wallonia (Belgium), after two centuries. We sampled soil by horizon in 18 ancient kiln sites to 1.20 meter depth. The adjacent charcoal-unaffected soils were sampled the same way. We also collected recent charcoal fragments and topsoil samples from a still active charcoal kiln located close to Dole (France) to apprehend the evolution of soil properties over time. The pH, total carbon (C) and nitrogen (N) content, available phosphorus (Pav), cation exchange capacity at pH 7 (CEC), exchangeable cations (Ca++, Mg++, K+, Na+) and loss on ignition at 550°C (LI550) were measured on each soil sample. We separated the soil profiles in 5 groups based on the nature of soil substrate and pedogenesis for interpretation of the results. We show that the total carbon stock is significantly increased at kiln sites due to higher C concentrations and greater depth of the organo-mineral horizon. The C/N ratio in charcoal-enriched soil horizons is significantly higher than in the neighboring reference soils but clearly attenuated compared to pure wood-charcoal fragments. The CEC is higher in the charcoal-enriched soil horizons, not only due to higher C concentrations but also to increased CEC by carbon unit at kiln sites. The high

  9. Soil stratigraphy of charcoal kiln remains (CKR) in the Litchfield Hills, CT, USA

    NASA Astrophysics Data System (ADS)

    Raab, Thomas; Hirsch, Florian; Ouimet, Will; Dethier, David

    2016-04-01

    Charcoal kiln relicts (CKRs) are small anthropogenic landforms that are often found in historic mining areas. CKRs have not been a big research topic yet but mainly were studied as by-products of archaeological excavations. In the last years newly available and very accurate Digital Elevation Models (DEMs) based on high-resolution Airborne Laser Scanning (ALS) data have been used to identify these archaeological remains. In addition, findings of several thousands CKRs in the North German Lowland have increased the awareness that historical charcoal production may significantly contribute to Late Holocene landscape change. Besides the archaeological aspect of CKRs, potential impacts of charcoal burning on the ecology of modern soil landscapes and ecosystem processes must be considered. A relatively high density of CKRs is found in the Litchfield Hills nearby the town of West Cornwall, Litchfield County, CT, USA. The CKRs are especially well preserved on slopes of the tributary valleys of the Housatonic River and form little, circular ramparts with diameters normally less than ten meters. First, rough field surveys in Litchfield County in spring 2015 have suggested differences between soils inside and outside the CKR. Soils on the CKR seem to have relatively deep humus-rich and charcoal containing topsoils whereas the topsoils outside the CKR appear typically thinner and less rich in humus. More thorough investigations have been started in autumn 2015 to prove the hypothesis that properties, distribution and development of soils are controlled by archaeological remains of historical charcoal burning. We present preliminary results from our field studies conducted in October 2015. The stratigraphy and the extent of the 26 CKRs were studied using a sedimentological-pedological approach by coring and trenching. Our results indicate that in Litchfield County the CKRs were used twice and in quick succession. Before the second reuse, the rim of the platform was stabilized

  10. An improved sup 222 Rn canister using a two-stage charcoal system

    SciTech Connect

    Scarpitta, S.C.; Harley, N.H. )

    1991-02-01

    A prototype for an improved passive {sup 222}Rn canister (R-Canister) was designed and compared to conventional charcoal canisters for its adsorptive and desorptive characteristics following exposures to {sup 222}Rn at 23{degrees}C in the presence of water vapor. The R-Canister, containing a two-stage charcoal system, minimizes the adverse effects of water vapor by maintaining the amount of adsorbed water vapor in the primary Rn adsorbent below the break-point of the charcoal. This is achieved by the placement of a desiccant charcoal cartridge 6 cm above the primary Rn adsorbent. The optimal bed depth of the primary adsorbent, determined from a diffusion study, was found to be 2.3 cm. The measured value for the effective diffusion coefficient of RN in a peat-based charcoal at 15% humidity and 25{degrees}C is 7.97 x 10(-10) m2 s-1. Exposures to 70% humidity for 7 d increased the buildup time-constant of Rn in the R-Canisters by 33% as compared to R-Canisters exposed to 15% humidity. At relative humidities ranging from 15-70%, the {sup 222}Rn buildup time-constant of the R-Canister ranged from 43-94 h, whereas the desorption time-constant ranged from 46-64 h. Typical buildup time-constants and desorption time-constants for conventional fully-opened charcoal canisters currently in field use ranged from 30-43 h and 17-29 h, respectively, over the same range of humidities.

  11. Radon-222 activity flux measurement using activated charcoal canisters: revisiting the methodology.

    PubMed

    Alharbi, Sami H; Akber, Riaz A

    2014-03-01

    The measurement of radon ((222)Rn) activity flux using activated charcoal canisters was examined to investigate the distribution of the adsorbed (222)Rn in the charcoal bed and the relationship between (222)Rn activity flux and exposure time. The activity flux of (222)Rn from five sources of varying strengths was measured for exposure times of one, two, three, five, seven, 10, and 14 days. The distribution of the adsorbed (222)Rn in the charcoal bed was obtained by dividing the bed into six layers and counting each layer separately after the exposure. (222)Rn activity decreased in the layers that were away from the exposed surface. Nevertheless, the results demonstrated that only a small correction might be required in the actual application of charcoal canisters for activity flux measurement, where calibration standards were often prepared by the uniform mixing of radium ((226)Ra) in the matrix. This was because the diffusion of (222)Rn in the charcoal bed and the detection efficiency as a function of the charcoal depth tended to counterbalance each other. The influence of exposure time on the measured (222)Rn activity flux was observed in two situations of the canister exposure layout: (a) canister sealed to an open bed of the material and (b) canister sealed over a jar containing the material. The measured (222)Rn activity flux decreased as the exposure time increased. The change in the former situation was significant with an exponential decrease as the exposure time increased. In the latter case, lesser reduction was noticed in the observed activity flux with respect to exposure time. This reduction might have been related to certain factors, such as absorption site saturation or the back diffusion of (222)Rn gas occurring at the canister-soil interface.

  12. High-speed ultrashort pulse fiber ring laser using charcoal nanoparticles.

    PubMed

    Li, Wenbo; Hu, Hongyu; Zhang, Xiang; Zhao, Shuai; Fu, Kan; Dutta, Niloy K

    2016-03-20

    A mode-locked erbium-doped fiber ring laser that is easy to set up is proposed and experimentally demonstrated to generate a high-repetition-rate optical pulse train with an ultrashort pulse width. The laser combines a rational harmonic mode-locking technique and charcoal nanoparticles as saturable absorbers. Compared to a solely active mode-locking scheme, the scheme with charcoal nanoparticles can remove the supermodes and narrow the pulse width by a factor of 0.57 at a repetition rate of 20 GHz. Numerical simulation of the laser performance is also provided, which shows good agreement with the experimental results. PMID:27140546

  13. Steady-state response of a charcoal bed to radon in flowing air with water vapor

    SciTech Connect

    Blue, T.E.; Jarzemba, M.S.; Fentiman, A.W.

    1995-06-01

    Previously we have developed a mathematical model of radon adsorption in active air with water vapor on small U.S. Environmental Protection Agency charcoal canisters that are used for environmental measurements of radon. The purpose of this paper is to extend this mathematical model to describe the adsorption of radon by large charcoal beds with radon-laden air flowing through them. The resulting model equations are solved analytically to predict the steady-state adsorption of radon by such beds. 14 refs., 3 figs.

  14. The charcoal trap: Miombo forests and the energy needs of people

    PubMed Central

    2011-01-01

    Background This study evaluates the carbon dioxide and other greenhouse gas fluxes to the atmosphere resulting from charcoal production in Zambia. It combines new biomass and flux data from a study, that was conducted in a miombo woodland within the Kataba Forest Reserve in the Western Province of Zambia, with data from other studies. Results The measurements at Kataba compared protected area (3 plots) with a highly disturbed plot outside the forest reserve and showed considerably reduced biomass after logging for charcoal production. The average aboveground biomass content of the reserve (Plots 2-4) was around 150 t ha-1, while the disturbed plot only contained 24 t ha-1. Soil carbon was not reduced significantly in the disturbed plot. Two years of eddy covariance measurements resulted in net ecosystem exchange values of -17 ± 31 g C m-2 y-1, in the first and 90 ± 16 g C m-2 in the second year. Thus, on the basis of these two years of measurement, there is no evidence that the miombo woodland at Kataba represents a present-day carbon sink. At the country level, it is likely that deforestation for charcoal production currently leads to a per capita emission rate of 2 - 3 t CO2 y-1. This is due to poor forest regeneration, although the resilience of miombo woodlands is high. Better post-harvest management could change this situation. Conclusions We argue that protection of miombo woodlands has to account for the energy demands of the population. The production at national scale that we estimated converts into 10,000 - 15,000 GWh y-1 of energy in the charcoal. The term "Charcoal Trap" we introduce, describes the fact that this energy supply has to be substituted when woodlands are protected. One possible solution, a shift in energy supply from charcoal to electricity, would reduce the pressure of forests but requires high investments into grid and power generation. Since Zambia currently cannot generate this money by itself, the country will remain locked in the

  15. Soil Charcoal to Assess the Impacts of Past Human Disturbances on Tropical Forests

    PubMed Central

    Vleminckx, Jason; Morin-Rivat, Julie; Biwolé, Achille B.; Daïnou, Kasso; Gillet, Jean-François; Doucet, Jean-Louis; Drouet, Thomas; Hardy, Olivier J.

    2014-01-01

    The canopy of many central African forests is dominated by light-demanding tree species that do not regenerate well under themselves. The prevalence of these species might result from ancient slash-and-burn agricultural activities that created large openings, while a decline of these activities since the colonial period could explain their deficit of regeneration. To verify this hypothesis, we compared soil charcoal abundance, used as a proxy for past slash-and-burn agriculture, and tree species composition assessed on 208 rainforest 0.2 ha plots located in three areas from Southern Cameroon. Species were classified in regeneration guilds (pioneer, non-pioneer light-demanding, shade-bearer) and characterized by their wood-specific gravity, assumed to reflect light requirement. We tested the correlation between soil charcoal abundance and: (i) the relative abundance of each guild, (ii) each species and family abundance and (iii) mean wood-specific gravity. Charcoal was found in 83% of the plots, indicating frequent past forest fires. Radiocarbon dating revealed two periods of fires: “recent” charcoal were on average 300 years old (up to 860 BP, n = 16) and occurred in the uppermost 20 cm soil layer, while “ancient” charcoal were on average 1900 years old (range: 1500 to 2800 BP, n = 43, excluding one sample dated 9400 BP), and found in all soil layers. While we expected a positive correlation between the relative abundance of light-demanding species and charcoal abundance in the upper soil layer, overall there was no evidence that the current heterogeneity in tree species composition can be explained by charcoal abundance in any soil layer. The absence of signal supporting our hypothesis might result from (i) a relatively uniform impact of past slash-and-burn activities, (ii) pedoturbation processes bringing ancient charcoal to the upper soil layer, blurring the signal of centuries-old Human disturbances, or (iii) the prevalence of other

  16. Chemical and biological characterization of emissions from small residential stoves burning wood and charcoal

    SciTech Connect

    Ramdahl, T.; Alfheim, I.; Rustad, S.; Olsen, T.

    1982-01-01

    Emissions from a small residential wood stove and a newly developed residential stove burning charcoal have been characterized by chemical analysis and mutagenicity testing (Ames Salmonella test). For wood burning the samples were taken under normal and starved air conditions burning birch and spruce separately. The burning conditions in the stove seemed to influence the emissions to a larger extent than the type of wood. The emissions of aldehydes, benzene and polycyclic aromatic hydrocarbons from the charcoal-burning stove are lower by a factor of 25-1000 as compared to the wood stove. The mutagenicity of the emissions showed a similar trend.

  17. Holocene Fire History of an Eastern Oregon Forest Based on Soil Charcoal Radiocarbon Dates

    NASA Astrophysics Data System (ADS)

    Carson, R. J.; Malkemus, D.; Clifton, C. F.

    2006-12-01

    Limited research has been done on long-term forest fire histories in northeastern Oregon. As part of an investigation to determine the minimum age of a 300 ha landslide in the Blue Mountains, a pit was excavated near the toe of the slide. The pit, located in a depression between the landslide and a ridge, contains massive clays and silts, and an 8000-year sequence of forest fires recorded in 7 buried charcoal layers. Eight- thousand-year-old Mazama Ash (Crater Lake, Oregon) is common in the area, but no tephra was found in the excavation. The upper 17 cm is organic rich soil. Seven horizons of charcoal are present; the upper six are subhorizontal and occur at depths of 17, 36, 41, 46, 52, and 57 cm. The lowest charcoal horizon follows a disconformity that cuts diagonally across the pit from 85 to 125 cm below the surface; oxidation in the form of orange mottling occurs above this disconformity (interpreted to be a paleoslope) and is prominent below it. The charcoal horizons provide evidence of large-scale forest fires in the vicinity, with differing intensities represented by the amount of charcoal in each horizon. The layers vary in thickness from 2 to 6 cm. Five charcoal horizons were radiocarbon dated (AMS) and calendar calibrated. The charcoal at the base of the soil (at 17 cm) provided an age of AD 1670 to 1960; this horizon correlates with widespread fires in the Blue Mountains in AD 1855. The horizon second closest to the surface (at 36 cm) provided an age of 1310 ± 40 B.P. The thickest horizon (at 46 cm) yielded an age of 2420 ± 40 B.P. The lowest horizontal horizon (at 57 cm) provided an age of 3460 ± 40 B.P. The lowest charcoal (at the disconformity) yielded an age of 7990 ± 40 B.P. Based on radiocarbon dates, the mean rate of sedimentation in the closed depression is approximately 1.2 cm/century. Fire episodes (which correspond remarkably well with a lake core site approximately 150 km south), indicate relatively long periods (from 400 to over 4000

  18. Research on Bamboo Charcoal Bonded Grinding Wheel and Its Mechanical Properties

    NASA Astrophysics Data System (ADS)

    Li, Wei; Xu, Minjie; Zhan, Fangyong; Jin, Mingsheng

    2014-08-01

    In this paper, a new type of grinding wheel and its manufacturing production process are introduced. The new BCB (Bamboo Charcoal Bond) grinding wheel was made of bamboo charcoal, phenolic resin and abrasive powder with higher press and temperature. To investigate its mechanical features, such as Rockwell hardness, resistance to abrasion, and resistance to pressure, some experiments on three BCB samples with different Resin weight ratios 20%, 25%, 30%, were carried out. The results showed that the BCB sample with proper moulding process and Resin weight ratio had better performance.

  19. Increased delignification by white rot fungi after pressure refining Miscanthus.

    PubMed

    Baker, Paul W; Charlton, Adam; Hale, Mike D C

    2015-01-01

    Pressure refining, a pulp making process to separate fibres of lignocellulosic materials, deposits lignin granules on the surface of the fibres that could enable increased access to lignin degrading enzymes. Three different white rot fungi were grown on pressure refined (at 6 bar and 8 bar) and milled Miscanthus. Growth after 28 days showed highest biomass losses on milled Miscanthus compared to pressure refined Miscanthus. Ceriporiopsis subvermispora caused a significantly higher proportion of lignin removal when grown on 6 bar pressure refined Miscanthus compared to growth on 8 bar pressure refined Miscanthus and milled Miscanthus. RM22b followed a similar trend but Phlebiopsis gigantea SPLog6 did not. Conversely, C. subvermispora growing on pressure refined Miscanthus revealed that the proportion of cellulose increased. These results show that two of the three white rot fungi used in this study showed higher delignification on pressure refined Miscanthus than milled Miscanthus.

  20. Waste treatment of kraft effluents by white-rot fungi

    SciTech Connect

    Kondo, R.

    1996-10-01

    The residual lignin in unbleached kraft pulp is commonly removed to afford a fully bleached pulp through a multi-stage bleaching process consisting of chlorination and alkaline-extraction stages. The effluent from such a bleaching process is of growing environmental concern because it shows a dark brown color and contains numerous chlorinated organic substances. Moreover, this effluent is not easily recycled within a mill recovery system because of the potential corrosion problems created by its high chlorine content. White-rot fungi have even heavily modified lignin such as kraft lignin and atoms demonstrated that kraft bleaching effluent can be rot fungi, in particular, Trametes versicolor and this review lecture, the possibility of the application of kraft effluents will be discussed.